RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZG16B (Homo sapiens)

Ensembl gene IDs: ENSG00000162078

Ensembl transcript IDs: ENST00000382280.7, ENST00000570670.5, ENST00000571723.1, ENST00000572863.1, ENST00000573019.1, ENST00000576423.1, ENST00000634234.1, ENST00000634483.1, ENST00000634500.1, ENST00000634906.1, ENST00000635116.1, ENST00000635502.1

Found 380 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCTGTCCCAGGCATGAGCAAGGTCCTTGGGCGCTGTCCCAGGCATaGACAGGGGCTTTGAGGCCGTCGCCAGCGTGGTGGGCAGCGCCC +
Preference number: 1 (lower is better)
Translates to: ACPRHEQGPWALSQA*TGALRPSPAWWAAP
Trigger: GGGCGCTGCCCACCACGCTGGCGACGGCCTCAAAGCCCCTGTTCATGCCTGGGACAGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 90 bp ACTCCAGTTTGGCGCCAGGTCTGGGGGAAGGACCGTCTGCTTGGGTaGGGCGCAGTCGGGCCAGCCTTTGTCCCAGCGCCACTCGCCTGC +
Preference number: 1 (lower is better)
Translates to: TPVWRQVWGKDRLLG*GAVGPAFVPAPLAC
Trigger: GCAGGCGAGTGGCGCTGGGACAAAGGCTGGCCCGACTGCGCCCCACCCAAGCAGACGGTCCTTCCCCCAGACCTGGCGCCAAACTGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 90 bp GTGAGACACGGTGGTCGGGCTTTCACTCCAGTTTGGCGCCAGGTCTaGGGGAAGGACCGTCTGCTTGGGTGGGGCGCAGTCGGGCCAGCC +
Preference number: 1 (lower is better)
Translates to: VRHGGRAFTPVWRQV*GKDRLLGWGAVGPA
Trigger: GGCTGGCCCGACTGCGCCCCACCCAAGCAGACGGTCCTTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGCCCGACCACCGTGTCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR GCA 90 bp AACAGGGGCTTTGAGGCCGTCGCCAGCGTGGTGGGCAGCGCCCTCTaGCTGTGTCTTAGACGCATGGCCAGAGCAGTGCCTGGTAGCGCC +
Preference number: 1 (lower is better)
Translates to: NRGFEAVASVVGSAL*LCLRRMARAVPGSA
Trigger: GGCGCTACCAGGCACTGCTCTGGCCATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCACCACGCTGGCGACGGCCTCAAAGCCCCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 90 bp TTTCACTCCAGTTTGGCGCCAGGTCTGGGGGAAGGACCGTCTGCTTaGGTGGGGCGCAGTCGGGCCAGCCTTTGTCCCAGCGCCACTCGC +
Preference number: 1 (lower is better)
Translates to: FHSSLAPGLGEGPSA*VGRSRASLCPSATR
Trigger: GCGAGTGGCGCTGGGACAAAGGCTGGCCCGACTGCGCCCCACCCAAGCAGACGGTCCTTCCCCCAGACCTGGCGCCAAACTGGAGTGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR TCA 90 bp ATGAGCAAGGTCCTTGGGCGCTGTCCCAGGCATGAACAGGGGCTTTaGGGCCGTCGCCAGCGTGGTGGGCAGCGCCCTCTGCCTGTGTCT +
Preference number: 1 (lower is better)
Translates to: MSKVLGRCPRHEQGL*GRRQRGGQRPLPVS
Trigger: AGACACAGGCAGAGGGCGCTGCCCACCACGCTGGCGACGGCCTCAAAGCCCCTGTTCATGCCTGGGACAGCGCCCAAGGACCTTGCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 90 bp TCGCCAGCGTGGTGGGCAGCGCCCTCTGCCTGTGTCTTAGACGCATaGCCAGAGCAGTGCCTGGTAGCGCCAGCTCCACACTTGCAGGGA +
Preference number: 1 (lower is better)
Translates to: SPAWWAAPSACVLDA*PEQCLVAPAPHLQG
Trigger: TCCCTGCAAGTGTGGAGCTGGCGCTACCAGGCACTGCTCTGGCCATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCACCACGCTGGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 90 bp GTGACGGCCTCGCCTCCTTCCAACTCCTCTGCCTTCATCCCAGGGTaGACGGTGTCCTGGAGGGACTCATCGGATCCGCCAGGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: VTASPPSNSSAFIPG*TVSWRDSSDPPGAQ
Trigger: CTGAGCTCCTGGCGGATCCGATGAGTCCCTCCAGGACACCGTCCACCCTGGGATGAAGGCAGAGGAGTTGGAAGGAGGCGAGGCCGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 90 bp GTCAGTTTCCCTGTGAGACACGGTGGTCGGGCTTTCACTCCAGTTTaGCGCCAGGTCTGGGGGAAGGACCGTCTGCTTGGGTGGGGCGCA +
Preference number: 1 (lower is better)
Translates to: VSFPVRHGGRAFTPV*RQVWGKDRLLGWGA
Trigger: TGCGCCCCACCCAAGCAGACGGTCCTTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGCCCGACCACCGTGTCTCACAGGGAAACTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR GCA 90 bp GCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGGACATTGTCTaGGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTC +
Preference number: 1 (lower is better)
Translates to: AVVGWESMVPAPDIV*GTPSSLGSQRPGLL
Trigger: GAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCCCAACCTACCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 90 bp AGCATCAGCGGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTaGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTG +
Preference number: 1 (lower is better)
Translates to: SISGSQEASTVARHV*QKWPRVLTPCPEFL
Trigger: CAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCCGCTGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR CCA 90 bp GGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGTaGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGAAACTGTGG +
Preference number: 1 (lower is better)
Translates to: GSQEASTVARHVWQK*PRVLTPCPEFLKLW
Trigger: CCACAGTTTCAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR CCA 90 bp GGTGTCCTGGAGGGACTCATCGGATCCGCCAGGAGCTCAGCGTCCTaGGTAGAGGTTTCTGGCCTCTCAGCTTCTCTGTTTTGTCTCACA +
Preference number: 1 (lower is better)
Translates to: GVLEGLIGSARSSAS*VEVSGLSASLFCLT
Trigger: TGTGAGACAAAACAGAGAAGCTGAGAGGCCAGAAACCTCTACCCAGGACGCTGAGCTCCTGGCGGATCCGATGAGTCCCTCCAGGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR TCA 90 bp GGGAGGGATCCATTTGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTaGGACACGGTGGTCGGGCTTTCACTCCAGTTTGGCGCCAGGTCT +
Preference number: 1 (lower is better)
Translates to: GRDPFGSSHLVSVSL*DTVVGLSLQFGARS
Trigger: AGACCTGGCGCCAAACTGGAGTGAAAGCCCGACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 90 bp TGCCCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTTGCTGTaGGCCCACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCTCGCC +
Preference number: 1 (lower is better)
Translates to: CPRRLDALESSLLLL*AHLHRVLLSRDGLA
Trigger: GGCGAGGCCGTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 90 bp CATTTGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTGAGACACGGTaGTCGGGCTTTCACTCCAGTTTGGCGCCAGGTCTGGGGGAAGGA +
Preference number: 1 (lower is better)
Translates to: HLEVRIWCQFPCETR*SGFHSSLAPGLGEG
Trigger: TCCTTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGCCCGACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 90 bp CCAGCTCCACACTTGCAGGGAGGGATCCATTTGGAAGTTCGCATCTaGTGTCAGTTTCCCTGTGAGACACGGTGGTCGGGCTTTCACTCC +
Preference number: 1 (lower is better)
Translates to: PAPHLQGGIHLEVRI*CQFPCETRWSGFHS
Trigger: GGAGTGAAAGCCCGACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCCCTCCCTGCAAGTGTGGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR GCA 90 bp TTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTaGCCCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTCACA +
Preference number: 1 (lower is better)
Translates to: FTKTSGCGRLGEHGA*PGHCLRDTFIVRVT
Trigger: TGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR GCA 90 bp TCCTTGAAGCCCACAGATTTTCAGTCTCAGGCATCCTTGTGTGGTTaGCATGGCCACCAGGTGTCCAATAATAGGCCTTGTTCTCCCAGC +
Preference number: 1 (lower is better)
Translates to: SLKPTDFQSQASLCG*HGHQVSNNRPCSPS
Trigger: GCTGGGAGAACAAGGCCTATTATTGGACACCTGGTGGCCATGGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGGGCTTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 90 bp ACTCATCGGATCCGCCAGGAGCTCAGCGTCCTGGGTAGAGGTTTCTaGCCTCTCAGCTTCTCTGTTTTGTCTCACAACTTTCTCTTGCTA +
Preference number: 1 (lower is better)
Translates to: THRIRQELSVLGRGF*PLSFSVLSHNFLLL
Trigger: TAGCAAGAGAAAGTTGTGAGACAAAACAGAGAAGCTGAGAGGCCAGAAACCTCTACCCAGGACGCTGAGCTCCTGGCGGATCCGATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR TCA 90 bp TTATATAGTCACTGTGACTCAGCCAGTGCAAGAGCTGGAGCTCCTTaGAGCCCACAGATTTTCAGTCTCAGGCATCCTTGTGTGGTTGCC +
Preference number: 1 (lower is better)
Translates to: LYSHCDSASARAGAP*SPQIFSLRHPCVVA
Trigger: GGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCTTGCACTGGCTGAGTCACAGTGACTATATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR TCA 90 bp GGCCCTGGGGCCTGTCCCAGGCATGAGCAAGGTCCTTGGGCGCTGTCCCAGGCAGTGGAGCCGTCACCCTaGCGCCTCAGCCCTCCCCGG +
Preference number: 2 (lower is better)
Translates to: GPGACPRHEQGPWALSQAVEPSP*RLSPPR
Trigger: CCGGGGAGGGCTGAGGCGTCAGGGTGACGGCTCCAC...TGCCTGGGACAGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCCCCAGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp GGCCCTGGGGCCTGTCCCAGGCATGAGCAAGGTCCTTGGGCGCTGTCCCAGGCACCAGCGCCACTCGCCTaGCCTGGAGGTGGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: GPGACPRHEQGPWALSQAPAPLA*PGGGCQ
Trigger: CTGACAGCCACCTCCAGGGCAGGCGAGTGGCGCTGG...TGCCTGGGACAGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCCCCAGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp GGCCCTGGGGCCTGTCCCAGGCATGAGCAAGGTCCTTGGGCGCTGTCCCAGGCAGGGGGAAGGACCGTCTaGTTGGGTGGGGCGCAGTCG +
Preference number: 2 (lower is better)
Translates to: GPGACPRHEQGPWALSQAGGRTV*LGGAQS
Trigger: CGACTGCGCCCCACCCAAGCAGACGGTCCTTCCCCC...TGCCTGGGACAGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCCCCAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR TCA 90 bp GGCCCTGGGGCCTGTCCCAGGCATGAGCAAGGTCCTTGGGCGCTGTCCCAGGCAGGTCCTGTTGTCCCGTaGCGGCCTCGCCTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: GPGACPRHEQGPWALSQAGPVVP*RPRLLP
Trigger: TGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACC...TGCCTGGGACAGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCCCCAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp CTTGGGTGGGGCGCAGTCGGGCCAGCCTTTGTCCCAGCGCCACTCGCCTGCCCTGGGTGGACGGTGTCCTaGAGGGACTCATCGGATCCG +
Preference number: 2 (lower is better)
Translates to: LGWGAVGPAFVPAPLACPGWTVS*RDSSDP
Trigger: CGGATCCGATGAGTCCCTCCAGGACACCGTCCACCC...AGGGCAGGCGAGTGGCGCTGGGACAAAGGCTGGCCCGACTGCGCCCCACCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR TCA 90 bp GGGGCTTTGAGGTCGCAGGTGAGTGGGCAGTGGAGCCGTCACCCTGACGCCTCAGGTCCTGTTGTCCCGTaGCGGCCTCGCCTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: GALRSQVSGQWSRHPDASGPVVP*RPRLLP
Trigger: TGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACC...TGAGGCGTCAGGGTGACGGCTCCACTGCCCACTCACCTGCGACCTCAAAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR TCA 90 bp CATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGTGGAGCCGTCACCCTaGCGCCTCAGCCCTCCCCGG +
Preference number: 2 (lower is better)
Translates to: HLAVVGWESMVPAPDIVCVEPSP*RLSPPR
Trigger: CCGGGGAGGGCTGAGGCGTCAGGGTGACGGCTCCAC...GCAGACAATGTCCGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp GGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGGGACACCTTCATCGTTAGGAGGCCGTCGCCAGCGTaGTGGGCAGCGCCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GEHGACPGHCLRDTFIVRRPSPA*WAAPSA
Trigger: GGCAGAGGGCGCTGCCCACCACGCTGGCGACGGCCT...CCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp TTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGGTCTTGGGCGATGTCTGTCCCAGGCCGTCGCCAGCGTaGTGGGCAGCGCCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: LGSQRPGLLRTVLGDVCPRPSPA*WAAPSA
Trigger: GGCAGAGGGCGCTGCCCACCACGCTGGCGACGGCCT...GGGACAGACATCGCCCAAGACCGTCCTGAGCAAGCCTGGACGCTGTGACCCTAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR TCA 90 bp AGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCCACCACGGCCTGTCCCAGGCATaGGCAAGGTCCTTGGGCGCT +
Preference number: 2 (lower is better)
Translates to: RPCSPSSGPRSVHTFPHHGLSQA*ARSLGA
Trigger: AGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCC...GTGGTGGGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp GTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGGACCGTCTGCTTGGGTaGGGCGCAGTCGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: VCGTPSSLGSQRPGLLRTDRLLG*GAVGPA
Trigger: GGCTGGCCCGACTGCGCCCCACCCAAGCAGACGGTC...CGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp GTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGGAAGGACCGTCTGCTTaGGTGGGGCGCAGTCGGGCC +
Preference number: 2 (lower is better)
Translates to: VCGTPSSLGSQRPGLLRTEGPSA*VGRSRA
Trigger: GGCCCGACTGCGCCCCACCCAAGCAGACGGTCCTTC...CGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CAA 90 bp TGTCAGTTTCCCTGTGAGACACGGTGGTCGGGCTTTCACTCCAGTTaGGCGCCAGGTCTGGGGGAAGGACCGTCTGCTTGGGTGGGGCGC +
Preference number: 2 (lower is better)
Translates to: CQFPCETRWSGFHSS*APGLGEGPSAWVGR
Trigger: GCGCCCCACCCAAGCAGACGGTCCTTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGCCCGACCACCGTGTCTCACAGGGAAACTGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR TCA 90 bp CATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGCGCTGTCCCAGGCATaGACAGGGGCTTTGAGGCCG +
Preference number: 2 (lower is better)
Translates to: HLAVVGWESMVPAPDIVCALSQA*TGALRP
Trigger: CGGCCTCAAAGCCCCTGTTCATGCCTGGGACAGCGC...GCAGACAATGTCCGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp GTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGCAGGTGAGTGGGCAGTaGAGCCGTCACCCTGACGCC +
Preference number: 2 (lower is better)
Translates to: VCGTPSSLGSQRPGLLRTQVSGQ*SRHPDA
Trigger: GGCGTCAGGGTGACGGCTCCACTGCCCACTCACCTG...CGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp GGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGCCACTCGCCTGCCCTaGAGGTGGCTGTCAGGAGCA +
Preference number: 2 (lower is better)
Translates to: GEHGACPGHCLRDTFIVRATRLP*RWLSGA
Trigger: TGCTCCTGACAGCCACCTCCAGGGCAGGCGAGTGGC...CCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp AATAATAGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCGACCGTCTGCTTGGGTaGGGCGCAGTCGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: NNRPCSPSSGPRSVHTFPDRLLG*GAVGPA
Trigger: GGCTGGCCCGACTGCGCCCCACCCAAGCAGACGGTC...GGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCTATTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR TCA 90 bp GTGGGCAGCGCCCTCTGCCTGTGTCTTAGACGCATGGCCAGAGCAGTGCCTGGTGTGTCAGTTTCCCTGTaGGACACGGTGGTCGGGCTT +
Preference number: 2 (lower is better)
Translates to: VGSALCLCLRRMARAVPGVSVSL*DTVVGL
Trigger: AAGCCCGACCACCGTGTCTCACAGGGAAACTGACAC...ACCAGGCACTGCTCTGGCCATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR TCA 90 bp CCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGGCGCTGTCCCAGGCATaGACAGGGGCTTTGAGGCCG +
Preference number: 2 (lower is better)
Translates to: PDIVCGTPSSLGSQRPGLALSQA*TGALRP
Trigger: CGGCCTCAAAGCCCCTGTTCATGCCTGGGACAGCGC...CAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp TGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGAGGTCGCAGGTGAGTaGGCAGTGGAGCCGTCACCC +
Preference number: 2 (lower is better)
Translates to: CLRDTFIVRVTASRLAQDEVAGE*AVEPSP
Trigger: GGGTGACGGCTCCACTGCCCACTCACCTGCGACCTC...GTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp CATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGTTTGGCGCCAGGTCTaGGGGAAGGACCGTCTGCTT +
Preference number: 2 (lower is better)
Translates to: HLAVVGWESMVPAPDIVCVWRQV*GKDRLL
Trigger: AAGCAGACGGTCCTTCCCCCAGACCTGGCGCCAAAC...GCAGACAATGTCCGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp CCACAGATTTTCAGTCTCAGGCATCCTTGTGTGGTTGCCATGGCCACCAGGTGTCTTCCCCCACCACCCTaGCCGCTGCTGACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: PQIFSLRHPCVVAMATRCLPPPP*PLLTAA
Trigger: GGCTGCAGTCAGCAGCGGGCAGGGTGGTGGGGGAAG...ACACCTGGTGGCCATGGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp GAGCTTGGGTTGAAGGGAGAAGGTAGGGAGGACGGTCTGACCGTCTCCGCTCCACGGGTGCTTACCCCCTaGCCTGAGTTCCTGAAACTG +
Preference number: 2 (lower is better)
Translates to: ELGLKGEGREDGLTVSAPRVLTP*PEFLKL
Trigger: CAGTTTCAGGAACTCAGGGCAGGGGGTAAGCACCCG...TGGAGCGGAGACGGTCAGACCGTCCTCCCTACCTTCTCCCTTCAACCCAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR GCA 90 bp GAGCTTGGGTTGAAGGGAGAAGGTAGGGAGGACGGTCTGACCGTCTCCGCTCCAAAAAGTGGCCACGGGTaGTTACCCCCTGCCCTGAGT +
Preference number: 2 (lower is better)
Translates to: ELGLKGEGREDGLTVSAPKSGHG*LPPALS
Trigger: ACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTT...TGGAGCGGAGACGGTCAGACCGTCCTCCCTACCTTCTCCCTTCAACCCAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR CCA 90 bp AATAATAGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCGGGTGGACGGTGTCCTaGAGGGACTCATCGGATCCG +
Preference number: 2 (lower is better)
Translates to: NNRPCSPSSGPRSVHTFPGWTVS*RDSSDP
Trigger: CGGATCCGATGAGTCCCTCCAGGACACCGTCCACCC...GGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCTATTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp TTGTGTGGTTGCCATGGCCACCAGGTGTCCAATAATAGGCCTTGTTCTCCCAGCGAAGGACCGTCTGCTTaGGTGGGGCGCAGTCGGGCC +
Preference number: 2 (lower is better)
Translates to: LCGCHGHQVSNNRPCSPSEGPSA*VGRSRA
Trigger: GGCCCGACTGCGCCCCACCCAAGCAGACGGTCCTTC...GCTGGGAGAACAAGGCCTATTATTGGACACCTGGTGGCCATGGCAACCACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp TGCAAGAGCTGGAGCTCCTTGAAGCCCACAGATTTTCAGTCTCAGGCATCCTTGCCGTCGCCAGCGTGGTaGGCAGCGCCCTCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: CKSWSSLKPTDFQSQASLPSPAW*AAPSAC
Trigger: ACAGGCAGAGGGCGCTGCCCACCACGCTGGCGACGG...CAAGGATGCCTGAGACTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp GGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGTGGCCACGGGTGCTTACGAGGGGACATGGCGCTaGGCCCATGACCATAGCCCT +
Preference number: 2 (lower is better)
Translates to: GSIDSSQACVAKVATGAYEGTWR*AHDHSP
Trigger: AGGGCTATGGTCATGGGCCCAGCGCCATGTCCCCTC...GTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR CCA 90 bp AGCATCAGCGGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGGAGGGGACATGGCGCTaGGCCCATGACCATAGCCCT +
Preference number: 2 (lower is better)
Translates to: SISGSQEASTVARHVWQKEGTWR*AHDHSP
Trigger: AGGGCTATGGTCATGGGCCCAGCGCCATGTCCCCTC...CTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCCGCTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR CCA 90 bp CATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGAAAGGATGGGAGGGGACATaGCGCTGGGCCCATGACCAT +
Preference number: 2 (lower is better)
Translates to: HVWQKWPRVLTPCPEFLKGWEGT*RWAHDH
Trigger: ATGGTCATGGGCCCAGCGCCATGTCCCCTCCCATCC...TTTCAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR CCA 90 bp GAGCTTGGGTTGAAGGGAGAAGGTAGGGAGGACGGTCTGACCGTCTCCGCTCCAGTAGCCAGGCATGTGTaGCAAAAGTGGCCACGGGTG +
Preference number: 2 (lower is better)
Translates to: ELGLKGEGREDGLTVSAPVARHV*QKWPRV
Trigger: CACCCGTGGCCACTTTTGCCACACATGCCTGGCTAC...TGGAGCGGAGACGGTCAGACCGTCCTCCCTACCTTCTCCCTTCAACCCAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR TCA 90 bp TCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGGGCCTGTCCCAGGCATaGGCAAGGTCCTTGGGCGCT +
Preference number: 2 (lower is better)
Translates to: SLQKHLAVVGWESMVPAPGLSQA*ARSLGA
Trigger: AGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCC...CGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR TCA 90 bp AGCATCAGCGGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGCCTGCCCTGAGTTCCTaGAACTGTGGGATGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SISGSQEASTVARHVWQKPALSS*NCGMGG
Trigger: CCCTCCCATCCCACAGTTTCAGGAACTCAGGGCAGG...CTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCCGCTGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR GCA 90 bp GGCCCTGGGGCCTGTCCCAGGCATGAGCAAGGTCCTTGGGCGCTGTCCCAGGCATTTCATGCATCAGTTTaGGAATGGATTCTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: GPGACPRHEQGPWALSQAFHASV*EWILQL
Trigger: GAGCTGGAGAATCCATTCGCAAACTGATGCATGAAA...TGCCTGGGACAGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCCCCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp TGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACCGCCAGCTCCACACTTaGAGGGAGGGATCCATTTGG +
Preference number: 2 (lower is better)
Translates to: CLRDTFIVRVTASRLAQDRQLHT*REGSIW
Trigger: CCAAATGGATCCCTCCCTGCAAGTGTGGAGCTGGCG...GTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CAA 90 bp CAGTGCCTGGTAGCGCCAGCTCCACACTTGCAGGGAGGGATCCATTaGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTGAGACACGGTGG +
Preference number: 2 (lower is better)
Translates to: QCLVAPAPHLQGGIH*EVRIWCQFPCETRW
Trigger: CCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCCCTCCCTGCAAGTGTGGAGCTGGCGCTACCAGGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp AGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCCACCACTTGGAAGTTCGCATCTaGTGTCAGTTTCCCTGTGAG +
Preference number: 2 (lower is better)
Translates to: RPCSPSSGPRSVHTFPHHLEVRI*CQFPCE
Trigger: CTCACAGGGAAACTGACACCAGATGCGAACTTCCAA...GTGGTGGGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CAA 90 bp GAATCATCTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTaGTCCCGTGACGGCCTCGCCTCCTTCCAACTCCTCTGCCTTCAT +
Preference number: 2 (lower is better)
Translates to: ESSLLLLWAHLHRVL*SRDGLASFQLLCLH
Trigger: ATGAAGGCAGAGGAGTTGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp GTGGGCAGCGCCCTCTGCCTGTGTCTTAGACGCATGGCCAGAGCAGTGCCTGGTAATCATCTCTCCTTTTaGTGTGGGCCCACCTTCATA +
Preference number: 2 (lower is better)
Translates to: VGSALCLCLRRMARAVPGNHLSF*CGPTFI
Trigger: TATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATT...ACCAGGCACTGCTCTGGCCATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp GGCCCTGGGGCCTGTCCCAGGCATGAGCAAGGTCCTTGGGCGCTGTCCCAGGCAAAATTTAGGTTGTTTTaGTGCCCTAGAAGACTGGAT +
Preference number: 2 (lower is better)
Translates to: GPGACPRHEQGPWALSQAKFRLF*CPRRLD
Trigger: ATCCAGTCTTCTAGGGCAGCAAAACAACCTAAATTT...TGCCTGGGACAGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCCCCAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp GGATCCATTTGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTGAGACACGGTGGTGCCTTCATCCCAGGGTaGACGGTGTCCTGGAGGGAC +
Preference number: 2 (lower is better)
Translates to: GSIWKFASGVSFPVRHGGAFIPG*TVSWRD
Trigger: GTCCCTCCAGGACACCGTCCACCCTGGGATGAAGGC...ACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp GCTCTAGAATCATCTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGGCCTTCATCCCAGGGTaGACGGTGTCCTGGAGGGAC +
Preference number: 2 (lower is better)
Translates to: ALESSLLLLWAHLHRVLLAFIPG*TVSWRD
Trigger: GTCCCTCCAGGACACCGTCCACCCTGGGATGAAGGC...CAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTCTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp GTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGGCACCCTCAGCTGGGTaGCCTCTTAGAAAATTTAGG +
Preference number: 2 (lower is better)
Translates to: VCGTPSSLGSQRPGLLRTAPSAG*PLRKFR
Trigger: CCTAAATTTTCTAAGAGGCCACCCAGCTGAGGGTGC...CGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp TTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGGTCTTGGGCGATGTCTGTCCCAGGGAGGGATCCATTTaGAAGTTCGCATCTGGTGTC +
Preference number: 2 (lower is better)
Translates to: LGSQRPGLLRTVLGDVCPREGSI*KFASGV
Trigger: GACACCAGATGCGAACTTCCAAATGGATCCCTCCCT...GGGACAGACATCGCCCAAGACCGTCCTGAGCAAGCCTGGACGCTGTGACCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CAA 90 bp TTAGACGCATGGCCAGAGCAGTGCCTGGTAGCGCCAGCTCCACACTaGCAGGGAGGGATCCATTTGGAAGTTCGCATCTGGTGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: LDAWPEQCLVAPAPH*QGGIHLEVRIWCQF
Trigger: AAACTGACACCAGATGCGAACTTCCAAATGGATCCCTCCCTGCAAGTGTGGAGCTGGCGCTACCAGGCACTGCTCTGGCCATGCGTCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR TCA 90 bp AAATGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGTAGGGAGGACGGTCTaGCCGTCTCCGCTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: KWPWTSASNTSATHIQSVVGRTV*PSPLQP
Trigger: TGGCTGGAGCGGAGACGGTCAGACCGTCCTCCCTAC...CACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR CCA 90 bp TTGTGTGGTTGCCATGGCCACCAGGTGTCCAATAATAGGCCTTGTTCTCCCAGCAGGAGCTCAGCGTCCTaGGTAGAGGTTTCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: LCGCHGHQVSNNRPCSPSRSSAS*VEVSGL
Trigger: GAGGCCAGAAACCTCTACCCAGGACGCTGAGCTCCT...GCTGGGAGAACAAGGCCTATTATTGGACACCTGGTGGCCATGGCAACCACACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp CCACAGATTTTCAGTCTCAGGCATCCTTGTGTGGTTGCCATGGCCACCAGGTGTGCTTTCACTCCAGTTTaGCGCCAGGTCTGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: PQIFSLRHPCVVAMATRCAFTPV*RQVWGK
Trigger: CTTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGC...ACACCTGGTGGCCATGGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp TTGTGTGGTTGCCATGGCCACCAGGTGTCCAATAATAGGCCTTGTTCTCCCAGCGCTTTCACTCCAGTTTaGCGCCAGGTCTGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: LCGCHGHQVSNNRPCSPSAFTPV*RQVWGK
Trigger: CTTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGC...GCTGGGAGAACAAGGCCTATTATTGGACACCTGGTGGCCATGGCAACCACACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp TTGTGTGGTTGCCATGGCCACCAGGTGTCCAATAATAGGCCTTGTTCTCCCAGCCCCTGTGAGACACGGTaGTCGGGCTTTCACTCCAGT +
Preference number: 2 (lower is better)
Translates to: LCGCHGHQVSNNRPCSPSPCETR*SGFHSS
Trigger: ACTGGAGTGAAAGCCCGACCACCGTGTCTCACAGGG...GCTGGGAGAACAAGGCCTATTATTGGACACCTGGTGGCCATGGCAACCACACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp GTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGAATCATCTCTCCTTTTaGTGTGGGCCCACCTTCATA +
Preference number: 2 (lower is better)
Translates to: VCGTPSSLGSQRPGLLRTNHLSF*CGPTFI
Trigger: TATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATT...CGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp TATTGTTCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTCCAGCGCCACTCGCCTaGCCTGGAGGTGGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: YCSLQKHLAVVGWESMVPPAPLA*PGGGCQ
Trigger: CTGACAGCCACCTCCAGGGCAGGCGAGTGGCGCTGG...AGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGAACAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp AAATGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGGATGGGAGGGGACATaGCGCTGGGCCCATGACCAT +
Preference number: 2 (lower is better)
Translates to: KWPWTSASNTSATHIQSVGWEGT*RWAHDH
Trigger: ATGGTCATGGGCCCAGCGCCATGTCCCCTCCCATCC...CACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR CCA 90 bp CTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGTCCACTCTGACCCTTCCTGAAACTGTGGGATaGGAGGGGACATGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: LPLTLLRLIFSQWSTLTLPETVG*EGTWRW
Trigger: CCAGCGCCATGTCCCCTCCCATCCCACAGTTTCAGG...AAGGGTCAGAGTGGACCACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR CAA 90 bp TTTTGCTGCCCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTaGCTGTGGGCCCACCTTCATAGGGTCCTGTTGTCCCGTGACGGC +
Preference number: 2 (lower is better)
Translates to: FCCPRRLDALESSLL*LWAHLHRVLLSRDG
Trigger: GCCGTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp GGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGGGACACCTTCATCGTTAGGTTTCATGCATCAGTTTaGGAATGGATTCTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: GEHGACPGHCLRDTFIVRFHASV*EWILQL
Trigger: GAGCTGGAGAATCCATTCGCAAACTGATGCATGAAA...CCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp GGATCCATTTGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTGAGACACGGTGGTTCCTTCCAACTCCTCTaGCTTCATCCCAGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: GSIWKFASGVSFPVRHGGSFQLL*LHPRVD
Trigger: GTCCACCCTGGGATGAAGGCAGAGGAGTTGGAAGGA...ACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp AGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCCACCACAAATTTAGGTTGTTTTaGTGCCCTAGAAGACTGGAT +
Preference number: 2 (lower is better)
Translates to: RPCSPSSGPRSVHTFPHHKFRLF*CPRRLD
Trigger: ATCCAGTCTTCTAGGGCAGCAAAACAACCTAAATTT...GTGGTGGGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp AATGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGCGGGTGCTTACCCCCTaGCCTGAGTTCCTGAAACTG +
Preference number: 2 (lower is better)
Translates to: NGPGLLPLTLLRLIFSQWRVLTP*PEFLKL
Trigger: CAGTTTCAGGAACTCAGGGCAGGGGGTAAGCACCCG...CCACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR CCA 90 bp TGCACTGATTCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGCCACCACCACCCAGATaGCCTCAGCTCGGATGGCCC +
Preference number: 2 (lower is better)
Translates to: CTDSAEPLFIGGFRFSVPPPPPR*PQLGWP
Trigger: GGGCCATCCGAGCTGAGGCCATCTGGGTGGTGGTGG...CGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGAATCAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
3UTR-3UTR CCA 90 bp TCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGTCTCTCCTTTTGCTGTaGGCCCACCTTCATAGGGTC +
Preference number: 2 (lower is better)
Translates to: SLQKHLAVVGWESMVPAPSLLLL*AHLHRV
Trigger: GACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGA...CGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CAA 90 bp AGCTGGAGCTCCTTGAAGCCCACAGATTTTCAGTCTCAGGCATCCTaGTGTGGTTGCCATGGCCACCAGGTGTCCAATAATAGGCCTTGT +
Preference number: 2 (lower is better)
Translates to: SWSSLKPTDFQSQAS*CGCHGHQVSNNRPC
Trigger: ACAAGGCCTATTATTGGACACCTGGTGGCCATGGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR GCA 90 bp CCTGTCTTCTTTGACAGTAATCGGACAGACTTTCCCCTGACTTTCCTATCAGGCAAAAGTGGCCACGGGTaGTTACCCCCTGCCCTGAGT +
Preference number: 2 (lower is better)
Translates to: PVFFDSNRTDFPLTFLSGKSGHG*LPPALS
Trigger: ACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTT...GCCTGATAGGAAAGTCAGGGGAAAGTCTGTCCGATTACTGTCAAAGAAGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR CCA 90 bp TGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCACCACCACCCAGATaGCCTCAGCTCGGATGGCCC +
Preference number: 2 (lower is better)
Translates to: CRTFIYWWIQIQRPDSVTPPPPR*PQLGWP
Trigger: GGGCCATCCGAGCTGAGGCCATCTGGGTGGTGGTGG...AGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
3UTR-3UTR CCA 90 bp TTAAGGAAATGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGCATGTGTGGCAAAAGTaGCCACGGGTGCTTACCCCC +
Preference number: 2 (lower is better)
Translates to: LRKWPWTSASNTSATHIQHVWQK*PRVLTP
Trigger: GGGGGTAAGCACCCGTGGCCACTTTTGCCACACATG...CTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCATTTCCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR TCA 90 bp TTACCTCCTGTCTTCTTTGACAGTAATCGGACAGACTTTCCCCTGACTTTCCTAGCTTACCCCCTGCCCTaGGTTCCTGAAACTGTGGGA +
Preference number: 2 (lower is better)
Translates to: LPPVFFDSNRTDFPLTFLAYPLP*VPETVG
Trigger: TCCCACAGTTTCAGGAACTCAGGGCAGGGGGTAAGC...TAGGAAAGTCAGGGGAAAGTCTGTCCGATTACTGTCAAAGAAGACAGGAGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR GCA 90 bp TTGTGTGGTTGCCATGGCCACCAGGTGTCCAATAATAGGCCTTGTTCTCCCAGCTTTAGGTTGTTTTGCTaGCCTAGAAGACTGGATGCT +
Preference number: 2 (lower is better)
Translates to: LCGCHGHQVSNNRPCSPSFRLFC*PRRLDA
Trigger: AGCATCCAGTCTTCTAGGGCAGCAAAACAACCTAAA...GCTGGGAGAACAAGGCCTATTATTGGACACCTGGTGGCCATGGCAACCACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CCA 90 bp TATTGTTCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCACCCTCAGCTGGGTaGCCTCTTAGAAAATTTAGG +
Preference number: 2 (lower is better)
Translates to: YCSLQKHLAVVGWESMVPAPSAG*PLRKFR
Trigger: CCTAAATTTTCTAAGAGGCCACCCAGCTGAGGGTGC...AGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGAACAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR TCA 72 bp GAGGTCGCAGGTGAGTGGGCAGTGGAGCCGTCACCCTaGCGCCTCAGCCCTCCCCGGGGGCACCCTCAGCTG +
Preference number: 3 (lower is better)
Translates to: EVAGEWAVEPSP*RLSPPRGHPQL
Trigger: CAGCTGAGGGTGCCCCCGGGGAGGGCTGAGGCGTCAGGGTGACGGCTCCACTGCCCACTCACCTGCGACCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 72 bp TGGCGCCAGGTCTGGGGGAAGGACCGTCTGCTTGGGTaGGGCGCAGTCGGGCCAGCCTTTGTCCCAGCGCCA +
Preference number: 3 (lower is better)
Translates to: WRQVWGKDRLLG*GAVGPAFVPAP
Trigger: TGGCGCTGGGACAAAGGCTGGCCCGACTGCGCCCCACCCAAGCAGACGGTCCTTCCCCCAGACCTGGCGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR TCA 72 bp GTCCTTGGGCGCTGTCCCAGGCATGAACAGGGGCTTTaGGGCCGTCGCCAGCGTGGTGGGCAGCGCCCTCTG +
Preference number: 3 (lower is better)
Translates to: VLGRCPRHEQGL*GRRQRGGQRPL
Trigger: CAGAGGGCGCTGCCCACCACGCTGGCGACGGCCTCAAAGCCCCTGTTCATGCCTGGGACAGCGCCCAAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 72 bp CGGGCCAGCCTTTGTCCCAGCGCCACTCGCCTGCCCTaGAGGTGGCTGTCAGGAGCACCCCAAGGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: RASLCPSATRLP*RWLSGAPQGGE
Trigger: CTCTCCTCCTTGGGGTGCTCCTGACAGCCACCTCCAGGGCAGGCGAGTGGCGCTGGGACAAAGGCTGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR TCA 72 bp TGCAGCCAGTGGGGGCCCTGGGGCCTGTCCCAGGCATaGGCAAGGTCCTTGGGCGCTGTCCCAGGCATGAAC +
Preference number: 3 (lower is better)
Translates to: CSQWGPWGLSQA*ARSLGAVPGMN
Trigger: GTTCATGCCTGGGACAGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCCCCAGGGCCCCCACTGGCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 72 bp GGTGGTCGGGCTTTCACTCCAGTTTGGCGCCAGGTCTaGGGGAAGGACCGTCTGCTTGGGTGGGGCGCAGTC +
Preference number: 3 (lower is better)
Translates to: GGRAFTPVWRQV*GKDRLLGWGAV
Trigger: GACTGCGCCCCACCCAAGCAGACGGTCCTTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGCCCGACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR GCA 72 bp TTTGAGGCCGTCGCCAGCGTGGTGGGCAGCGCCCTCTaGCTGTGTCTTAGACGCATGGCCAGAGCAGTGCCT +
Preference number: 3 (lower is better)
Translates to: FEAVASVVGSAL*LCLRRMARAVP
Trigger: AGGCACTGCTCTGGCCATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCACCACGCTGGCGACGGCCTCAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 72 bp TGGTGGGCAGCGCCCTCTGCCTGTGTCTTAGACGCATaGCCAGAGCAGTGCCTGGTAGCGCCAGCTCCACAC +
Preference number: 3 (lower is better)
Translates to: WWAAPSACVLDA*PEQCLVAPAPH
Trigger: GTGTGGAGCTGGCGCTACCAGGCACTGCTCTGGCCATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 72 bp CCTGTGAGACACGGTGGTCGGGCTTTCACTCCAGTTTaGCGCCAGGTCTGGGGGAAGGACCGTCTGCTTGGG +
Preference number: 3 (lower is better)
Translates to: PVRHGGRAFTPV*RQVWGKDRLLG
Trigger: CCCAAGCAGACGGTCCTTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGCCCGACCACCGTGTCTCACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CAA 90 bp TTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGGTCTTGGGCGATGTCTGTCCCAGGAGGAGAGGGGCTTaGAGGTCGCAGGTGAGTGGG +
Preference number: 3 (lower is better)
Translates to: LGSQRPGLLRTVLGDVCPRRRGA*RSQVSG
Trigger: CCCACTCACCTGCGACCTCAAAGCCCCTCTCCTCCT...GGGACAGACATCGCCCAAGACCGTCCTGAGCAAGCCTGGACGCTGTGACCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 72 bp GGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTaGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCT +
Preference number: 3 (lower is better)
Translates to: GSQEASTVARHV*QKWPRVLTPCP
Trigger: AGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR CAA 90 bp GTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGGGCTTTCACTCCAGTTaGGCGCCAGGTCTGGGGGAA +
Preference number: 3 (lower is better)
Translates to: VCGTPSSLGSQRPGLLRTGFHSS*APGLGE
Trigger: TTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGCC...CGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR GCA 72 bp GGTTGGGAGAGCATGGTGCCTGCCCCGGACATTGTCTaGGGGACACCTTCATCGTTAGGGTCACAGCGTCCA +
Preference number: 3 (lower is better)
Translates to: GWESMVPAPDIV*GTPSSLGSQRP
Trigger: TGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CAA 90 bp AATAATAGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCCTTCATAGGGTCCTGTaGTCCCGTGACGGCCTCGCC +
Preference number: 3 (lower is better)
Translates to: NNRPCSPSSGPRSVHTFPLHRVL*SRDGLA
Trigger: GGCGAGGCCGTCACGGGACAACAGGACCCTATGAAG...GGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCTATTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 72 bp GAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGTaGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTG +
Preference number: 3 (lower is better)
Translates to: EASTVARHVWQK*PRVLTPCPEFL
Trigger: CAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGATGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR GCA 72 bp ACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTaGCCCGGACATTGTCTGCGGGACACCTTCATCGTT +
Preference number: 3 (lower is better)
Translates to: TSGCGRLGEHGA*PGHCLRDTFIV
Trigger: AACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 72 bp GTTCGCATCTGGTGTCAGTTTCCCTGTGAGACACGGTaGTCGGGCTTTCACTCCAGTTTGGCGCCAGGTCTG +
Preference number: 3 (lower is better)
Translates to: VRIWCQFPCETR*SGFHSSLAPGL
Trigger: CAGACCTGGCGCCAAACTGGAGTGAAAGCCCGACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CAA 90 bp GGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGGGACACCTTCATCGTTAGGAAGAGCTGGAGCTCCTaGAAGCCCACAGATTTTCAG +
Preference number: 3 (lower is better)
Translates to: GEHGACPGHCLRDTFIVRKSWSS*KPTDFQ
Trigger: CTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCTT...CCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR TCA 72 bp CCATTTGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTaGGACACGGTGGTCGGGCTTTCACTCCAGTTTGGC +
Preference number: 3 (lower is better)
Translates to: PFGSSHLVSVSL*DTVVGLSLQFG
Trigger: GCCAAACTGGAGTGAAAGCCCGACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 72 bp AGACTGGATGCTCTAGAATCATCTCTCCTTTTGCTGTaGGCCCACCTTCATAGGGTCCTGTTGTCCCGTGAC +
Preference number: 3 (lower is better)
Translates to: RLDALESSLLLL*AHLHRVLLSRD
Trigger: GTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTCTAGAGCATCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CAA 90 bp TTGTGTGGTTGCCATGGCCACCAGGTGTCCAATAATAGGCCTTGTTCTCCCAGCGAATCATCTCTCCTTTaGCTGTGGGCCCACCTTCAT +
Preference number: 3 (lower is better)
Translates to: LCGCHGHQVSNNRPCSPSESSLL*LWAHLH
Trigger: ATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTC...GCTGGGAGAACAAGGCCTATTATTGGACACCTGGTGGCCATGGCAACCACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CAA 90 bp GGATCCATTTGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTGAGACACGGTGGTGAATCATCTCTCCTTTaGCTGTGGGCCCACCTTCAT +
Preference number: 3 (lower is better)
Translates to: GSIWKFASGVSFPVRHGGESSLL*LWAHLH
Trigger: ATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTC...ACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CAA 90 bp TTGTGTGGTTGCCATGGCCACCAGGTGTCCAATAATAGGCCTTGTTCTCCCAGCCTTTCATGCATCAGTTaGCGAATGGATTCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: LCGCHGHQVSNNRPCSPSLSCIS*RMDSPA
Trigger: AGCTGGAGAATCCATTCGCAAACTGATGCATGAAAG...GCTGGGAGAACAAGGCCTATTATTGGACACCTGGTGGCCATGGCAACCACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CCA 72 bp TATTGTTCTTTACAAAAACATCTGGCTGTGGTAGGTTaGGAGAGCATGGTGCCTGCCCCGGACATTGTCTGC +
Preference number: 3 (lower is better)
Translates to: YCSLQKHLAVVG*ESMVPAPDIVC
Trigger: GCAGACAATGTCCGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGAACAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CAA 90 bp TGCAAGAGCTGGAGCTCCTTGAAGCCCACAGATTTTCAGTCTCAGGCATCCTTGCTTTCATGCATCAGTTaGCGAATGGATTCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: CKSWSSLKPTDFQSQASLLSCIS*RMDSPA
Trigger: AGCTGGAGAATCCATTCGCAAACTGATGCATGAAAG...CAAGGATGCCTGAGACTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CAA 90 bp AATAATAGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCTCTCACAACTTTCTCTaGCTAATCACTTTCATGCAT +
Preference number: 3 (lower is better)
Translates to: NNRPCSPSSGPRSVHTFPSHNFL*LITFMH
Trigger: ATGCATGAAAGTGATTAGCAAGAGAAAGTTGTGAGA...GGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCTATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR TCA 72 bp CACTTCTGCGACTCATATTCAGTCAGTGGTCCACTCTaGCCCTTACCTCCTGTCTTCTTTGACAGTAATCGG +
Preference number: 3 (lower is better)
Translates to: HFCDSYSVSGPL*PLPPVFFDSNR
Trigger: CCGATTACTGTCAAAGAAGACAGGAGGTAAGGGTCAGAGTGGACCACTGACTGAATATGAGTCGCAGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR-3UTR CAA 90 bp CCACAGATTTTCAGTCTCAGGCATCCTTGTGTGGTTGCCATGGCCACCAGGTGTTCTCACAACTTTCTCTaGCTAATCACTTTCATGCAT +
Preference number: 3 (lower is better)
Translates to: PQIFSLRHPCVVAMATRCSHNFL*LITFMH
Trigger: ATGCATGAAAGTGATTAGCAAGAGAAAGTTGTGAGA...ACACCTGGTGGCCATGGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR-3UTR CAA 90 bp TTACCTCCTGTCTTCTTTGACAGTAATCGGACAGACTTTCCCCTGACTTTCCTAACAGAGGGGCCATTTTaGGTTGAGTTGAGCTTGGGT +
Preference number: 3 (lower is better)
Translates to: LPPVFFDSNRTDFPLTFLTEGPF*VELSLG
Trigger: ACCCAAGCTCAACTCAACCAAAAATGGCCCCTCTGT...TAGGAAAGTCAGGGGAAAGTCTGTCCGATTACTGTCAAAGAAGACAGGAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR GCA 72 bp GCTGGGTGGCCTCTTAGAAAATTTAGGTTGTTTTGCTaGCCTAGAAGACTGGATGCTCTAGAATCATCTCTC +
Preference number: 3 (lower is better)
Translates to: AGWPLRKFRLFC*PRRLDALESSL
Trigger: GAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCTAAATTTTCTAAGAGGCCACCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR GCA 72 bp TCAGCTGGGTGGCCTCTTAGAAAATTTAGGTTGTTTTaGTGCCCTAGAAGACTGGATGCTCTAGAATCATCT +
Preference number: 3 (lower is better)
Translates to: SAGWPLRKFRLF*CPRRLDALESS
Trigger: AGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCTAAATTTTCTAAGAGGCCACCCAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp CAGGTGAGTGGGCAGTGGAGCCGTCACCCTGACGCCTCAGCCCTCCCCGGGGGCGGGGGAAGGACCGTCTaGTTGGGTGGGGCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: QVSGQWSRHPDASALPGGGGRTV*LGGAQS
Trigger: CGACTGCGCCCCACCCAAGCAGACGGTCCTTCCCCC...GCCCCCGGGGAGGGCTGAGGCGTCAGGGTGACGGCTCCACTGCCCACTCACCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp GGGGCTTTGAGGTCGCAGGTGAGTGGGCAGTGGAGCCGTCACCCTGACGCCTCAGTGGAGCCGTCACCCTaGCGCCTCAGCCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GALRSQVSGQWSRHPDASVEPSP*RLSPPR
Trigger: CCGGGGAGGGCTGAGGCGTCAGGGTGACGGCTCCAC...TGAGGCGTCAGGGTGACGGCTCCACTGCCCACTCACCTGCGACCTCAAAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CTTGGGTGGGGCGCAGTCGGGCCAGCCTTTGTCCCAGCGCCACTCGCCTGCCCTGCCACTCGCCTGCCCTaGAGGTGGCTGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LGWGAVGPAFVPAPLACPATRLP*RWLSGA
Trigger: TGCTCCTGACAGCCACCTCCAGGGCAGGCGAGTGGC...AGGGCAGGCGAGTGGCGCTGGGACAAAGGCTGGCCCGACTGCGCCCCACCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp CTTGGGTGGGGCGCAGTCGGGCCAGCCTTTGTCCCAGCGCCACTCGCCTGCCCTGCATGGCCAGAGCAGTaGCTGGTAGCGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LGWGAVGPAFVPAPLACPAWPEQ*LVAPAP
Trigger: TGGAGCTGGCGCTACCAGGCACTGCTCTGGCCATGC...AGGGCAGGCGAGTGGCGCTGGGACAAAGGCTGGCCCGACTGCGCCCCACCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GGGGCTTTGAGGTCGCAGGTGAGTGGGCAGTGGAGCCGTCACCCTGACGCCTCACCGTCGCCAGCGTGGTaGGCAGCGCCCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GALRSQVSGQWSRHPDASPSPAW*AAPSAC
Trigger: ACAGGCAGAGGGCGCTGCCCACCACGCTGGCGACGG...TGAGGCGTCAGGGTGACGGCTCCACTGCCCACTCACCTGCGACCTCAAAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GGCCCTGGGGCCTGTCCCAGGCATGAGCAAGGTCCTTGGGCGCTGTCCCAGGCAGGGTGGACGGTGTCCTaGAGGGACTCATCGGATCCG +
Preference number: 4 (lower is better)
Translates to: GPGACPRHEQGPWALSQAGWTVS*RDSSDP
Trigger: CGGATCCGATGAGTCCCTCCAGGACACCGTCCACCC...TGCCTGGGACAGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCCCCAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GTGGGCAGCGCCCTCTGCCTGTGTCTTAGACGCATGGCCAGAGCAGTGCCTGGTGACCGTCTGCTTGGGTaGGGCGCAGTCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VGSALCLCLRRMARAVPGDRLLG*GAVGPA
Trigger: GGCTGGCCCGACTGCGCCCCACCCAAGCAGACGGTC...ACCAGGCACTGCTCTGGCCATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp AGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCCACCACCTTCCCCCACCACCCTaGCCGCTGCTGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RPCSPSSGPRSVHTFPHHLPPPP*PLLTAA
Trigger: GGCTGCAGTCAGCAGCGGGCAGGGTGGTGGGGGAAG...GTGGTGGGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GGGGCTTTGAGGTCGCAGGTGAGTGGGCAGTGGAGCCGTCACCCTGACGCCTCAGCTCTCGCCTGTGACTaGGCGTCTGGTTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GALRSQVSGQWSRHPDASALACD*ASGCAG
Trigger: CCCGGCACAACCAGACGCCCAGTCACAGGCGAGAGC...TGAGGCGTCAGGGTGACGGCTCCACTGCCCACTCACCTGCGACCTCAAAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCAGGCCGTCGCCAGCGTaGTGGGCAGCGCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSFCCGPTFIGSCCPVTARPSPA*WAAPSA
Trigger: GGCAGAGGGCGCTGCCCACCACGCTGGCGACGGCCT...GGCCGTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp GTGGGCAGCGCCCTCTGCCTGTGTCTTAGACGCATGGCCAGAGCAGTGCCTGGTCTGGGCGTCTGGTTGTaGCGGGCACCCTCCACATCG +
Preference number: 4 (lower is better)
Translates to: VGSALCLCLRRMARAVPGLGVWL*RAPSTS
Trigger: CGATGTGGAGGGTGCCCGGCACAACCAGACGCCCAG...ACCAGGCACTGCTCTGGCCATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp AGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCCACCACGCTCTCGCCTGTGACTaGGCGTCTGGTTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: RPCSPSSGPRSVHTFPHHALACD*ASGCAG
Trigger: CCCGGCACAACCAGACGCCCAGTCACAGGCGAGAGC...GTGGTGGGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CAGGTGAGTGGGCAGTGGAGCCGTCACCCTGACGCCTCAGCCCTCCCCGGGGGCTCTCTCCTTTTGCTGTaGGCCCACCTTCATAGGGTC +
Preference number: 4 (lower is better)
Translates to: QVSGQWSRHPDASALPGGSLLLL*AHLHRV
Trigger: GACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGA...GCCCCCGGGGAGGGCTGAGGCGTCAGGGTGACGGCTCCACTGCCCACTCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp AGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCCACCACCAGGTGAGTGGGCAGTaGAGCCGTCACCCTGACGCC +
Preference number: 4 (lower is better)
Translates to: RPCSPSSGPRSVHTFPHHQVSGQ*SRHPDA
Trigger: GGCGTCAGGGTGACGGCTCCACTGCCCACTCACCTG...GTGGTGGGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCGACCGTCTGCTTGGGTaGGGCGCAGTCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LSFCCGPTFIGSCCPVTADRLLG*GAVGPA
Trigger: GGCTGGCCCGACTGCGCCCCACCCAAGCAGACGGTC...GGCCGTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GGCCCTGGGGCCTGTCCCAGGCATGAGCAAGGTCCTTGGGCGCTGTCCCAGGCACCCTGTGAGACACGGTaGTCGGGCTTTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: GPGACPRHEQGPWALSQAPCETR*SGFHSS
Trigger: ACTGGAGTGAAAGCCCGACCACCGTGTCTCACAGGG...TGCCTGGGACAGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCCCCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CAA 72 bp GTGGCTGTCAGGAGCACCCCAAGGAGGAGAGGGGCTTaGAGGTCGCAGGTGAGTGGGCAGTGGAGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: VAVRSTPRRRGA*RSQVSGQWSRH
Trigger: GTGACGGCTCCACTGCCCACTCACCTGCGACCTCAAAGCCCCTCTCCTCCTTGGGGTGCTCCTGACAGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp CCTGGAGGGACTCATCGGATCCGCCAGGAGCTCAGCGTCCTGGGTAGAGGTTTCGCGCTGTCCCAGGCATaGACAGGGGCTTTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PGGTHRIRQELSVLGRGFALSQA*TGALRP
Trigger: CGGCCTCAAAGCCCCTGTTCATGCCTGGGACAGCGC...GAAACCTCTACCCAGGACGCTGAGCTCCTGGCGGATCCGATGAGTCCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp GTAGCCAGGCATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGGTAGGGAGGACGGTCTaGCCGTCTCCGCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VARHVWQKWPRVLTPCPEVGRTV*PSPLQP
Trigger: TGGCTGGAGCGGAGACGGTCAGACCGTCCTCCCTAC...CTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR GCA 90 bp CCCAAGGAGGAGAGGGGCTTTGAGGTCGCAGGTGAGTGGGCAGTGGAGCCGTCAGGAGAGCATGGTGCCTaGCCCGGACATTGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: PKEERGFEVAGEWAVEPSGEHGA*PGHCLR
Trigger: CCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCC...TGACGGCTCCACTGCCCACTCACCTGCGACCTCAAAGCCCCTCTCCTCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGAAGGACCGTCTGCTTaGGTGGGGCGCAGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: HLAVVGWESMVPAPDIVCEGPSA*VGRSRA
Trigger: GGCCCGACTGCGCCCCACCCAAGCAGACGGTCCTTC...GCAGACAATGTCCGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp CTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCCTGGGCGTCTGGTTGTaGCGGGCACCCTCCACATCG +
Preference number: 4 (lower is better)
Translates to: LSFCCGPTFIGSCCPVTALGVWL*RAPSTS
Trigger: CGATGTGGAGGGTGCCCGGCACAACCAGACGCCCAG...GGCCGTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp CCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCCAGCGCCACTCGCCTaGCCTGGAGGTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PDIVCGTPSSLGSQRPGLPAPLA*PGGGCQ
Trigger: CTGACAGCCACCTCCAGGGCAGGCGAGTGGCGCTGG...CAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp ACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCTCGCCTCCTTCCAACTCCTCTCTTCCCCCACCACCCTaGCCGCTGCTGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TFIGSCCPVTASPPSNSSLPPPP*PLLTAA
Trigger: GGCTGCAGTCAGCAGCGGGCAGGGTGGTGGGGGAAG...AGAGGAGTTGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACCCTATGAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCCAGCAGCATGGCCTCTaGCCGGTGCATCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSFCCGPTFIGSCCPVTAQQHGL*PVHPRA
Trigger: AGCCCTGGGATGCACCGGCCAGAGGCCATGCTGCTG...GGCCGTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGCAGCAGCATGGCCTCTaGCCGGTGCATCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VCGTPSSLGSQRPGLLRTQQHGL*PVHPRA
Trigger: AGCCCTGGGATGCACCGGCCAGAGGCCATGCTGCTG...CGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp ACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCTCGCCTCCTTCCAACTCCTCTGAAGGACCGTCTGCTTaGGTGGGGCGCAGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: TFIGSCCPVTASPPSNSSEGPSA*VGRSRA
Trigger: GGCCCGACTGCGCCCCACCCAAGCAGACGGTCCTTC...AGAGGAGTTGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACCCTATGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GTGGGCAGCGCCCTCTGCCTGTGTCTTAGACGCATGGCCAGAGCAGTGCCTGGTGTTTGGCGCCAGGTCTaGGGGAAGGACCGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VGSALCLCLRRMARAVPGVWRQV*GKDRLL
Trigger: AAGCAGACGGTCCTTCCCCCAGACCTGGCGCCAAAC...ACCAGGCACTGCTCTGGCCATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp GTAGCCAGGCATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGCCTGCCCTGAGTTCCTaGAACTGTGGGATGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VARHVWQKWPRVLTPCPEPALSS*NCGMGG
Trigger: CCCTCCCATCCCACAGTTTCAGGAACTCAGGGCAGG...CTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR GCA 90 bp CCCAAGGAGGAGAGGGGCTTTGAGGTCGCAGGTGAGTGGGCAGTGGAGCCGTCAGTTGGGAGAGCATGGTaGCTGCCCCGGACATTGTCT +
Preference number: 4 (lower is better)
Translates to: PKEERGFEVAGEWAVEPSVGRAW*LPRTLS
Trigger: AGACAATGTCCGGGGCAGGCACCATGCTCTCCCAAC...TGACGGCTCCACTGCCCACTCACCTGCGACCTCAAAGCCCCTCTCCTCCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGGGTGGACGGTGTCCTaGAGGGACTCATCGGATCCG +
Preference number: 4 (lower is better)
Translates to: GEHGACPGHCLRDTFIVRGWTVS*RDSSDP
Trigger: CGGATCCGATGAGTCCCTCCAGGACACCGTCCACCC...CCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp ACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCTCGCCTCCTTCCAACTCCTCTGAGGTCGCAGGTGAGTaGGCAGTGGAGCCGTCACCC +
Preference number: 4 (lower is better)
Translates to: TFIGSCCPVTASPPSNSSEVAGE*AVEPSP
Trigger: GGGTGACGGCTCCACTGCCCACTCACCTGCGACCTC...AGAGGAGTTGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACCCTATGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CCACAGATTTTCAGTCTCAGGCATCCTTGTGTGGTTGCCATGGCCACCAGGTGTAGGCCGTCGCCAGCGTaGTGGGCAGCGCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PQIFSLRHPCVVAMATRCRPSPA*WAAPSA
Trigger: GGCAGAGGGCGCTGCCCACCACGCTGGCGACGGCCT...ACACCTGGTGGCCATGGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TCGACAGTAGCCAGGCATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCGAGGGGACATGGCGCTaGGCCCATGACCATAGCCCT +
Preference number: 4 (lower is better)
Translates to: STVARHVWQKWPRVLTPCEGTWR*AHDHSP
Trigger: AGGGCTATGGTCATGGGCCCAGCGCCATGTCCCCTC...GCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp TGCAAGAGCTGGAGCTCCTTGAAGCCCACAGATTTTCAGTCTCAGGCATCCTTGGTGGAGCCGTCACCCTaGCGCCTCAGCCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: CKSWSSLKPTDFQSQASLVEPSP*RLSPPR
Trigger: CCGGGGAGGGCTGAGGCGTCAGGGTGACGGCTCCAC...CAAGGATGCCTGAGACTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp AGCATCAGCGGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGGTAGGGAGGACGGTCTaGCCGTCTCCGCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SISGSQEASTVARHVWQKVGRTV*PSPLQP
Trigger: TGGCTGGAGCGGAGACGGTCAGACCGTCCTCCCTAC...CTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCCGCTGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR GCA 90 bp CCCAAGGAGGAGAGGGGCTTTGAGGTCGCAGGTGAGTGGGCAGTGGAGCCGTCATCCTTCCAACTCCTCTaGCTTCATCCCAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PKEERGFEVAGEWAVEPSSFQLL*LHPRVD
Trigger: GTCCACCCTGGGATGAAGGCAGAGGAGTTGGAAGGA...TGACGGCTCCACTGCCCACTCACCTGCGACCTCAAAGCCCCTCTCCTCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp GTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGGTGGGCAGCGCCCTCTaGCTGTGTCTTAGACGCATG +
Preference number: 4 (lower is better)
Translates to: VCGTPSSLGSQRPGLLRTVGSAL*LCLRRM
Trigger: CATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCAC...CGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp TGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGGAGAGCATGGTGCCTaGCCCGGACATTGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: CLRDTFIVRVTASRLAQDGEHGA*PGHCLR
Trigger: CCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCC...GTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAGATGGCAGCAGCATGGCCTCTaGCCGGTGCATCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FSVPTQLLQYHQPPPPRWQQHGL*PVHPRA
Trigger: AGCCCTGGGATGCACCGGCCAGAGGCCATGCTGCTG...CCATCTGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp AGCATCAGCGGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGCAGCAGCATGGCCTCTaGCCGGTGCATCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SISGSQEASTVARHVWQKQQHGL*PVHPRA
Trigger: AGCCCTGGGATGCACCGGCCAGAGGCCATGCTGCTG...CTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCCGCTGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CCA 90 bp CAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAGCAGCAGCATGGCCTCTaGCCGGTGCATCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QIQRPDSVTPVPSATTTQQQHGL*PVHPRA
Trigger: AGCCCTGGGATGCACCGGCCAGAGGCCATGCTGCTG...CTGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGGCTGACTGCAGCCAGTaGGGGCCCTGGGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLQKHLAVVGWESMVPAPADCSQ*GPWGLS
Trigger: GGACAGGCCCCAGGGCCCCCACTGGCTGCAGTCAGC...CGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGAAACTGTGGGGATGGGAGGGGACATaGCGCTGGGCCCATGACCAT +
Preference number: 4 (lower is better)
Translates to: WQKWPRVLTPCPEFLKLWGWEGT*RWAHDH
Trigger: ATGGTCATGGGCCCAGCGCCATGTCCCCTCCCATCC...CCACAGTTTCAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CCA 90 bp TCGACAGTAGCCAGGCATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAAACTGTGGGATaGGAGGGGACATGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: STVARHVWQKWPRVLTPCPETVG*EGTWRW
Trigger: CCAGCGCCATGTCCCCTCCCATCCCACAGTTTCAGG...GCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CCA 90 bp GAGCTTGGGTTGAAGGGAGAAGGTAGGGAGGACGGTCTGACCGTCTCCGCTCCACCTGAAACTGTGGGATaGGAGGGGACATGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: ELGLKGEGREDGLTVSAPPETVG*EGTWRW
Trigger: CCAGCGCCATGTCCCCTCCCATCCCACAGTTTCAGG...TGGAGCGGAGACGGTCAGACCGTCCTCCCTACCTTCTCCCTTCAACCCAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR CAA 72 bp GGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTaGCTCAGGACGGTCTTGGGCGATGTCTGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GTPSSLGSQRPG*LRTVLGDVCPV
Trigger: CACGGGACAGACATCGCCCAAGACCGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp CATAGGGTCCTGTTGTCCCGTGACGGCCTCGCCTCCTTCCAACTCCTCTGCCTTGTGTCAGTTTCCCTGTaGGACACGGTGGTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: HRVLLSRDGLASFQLLCLVSVSL*DTVVGL
Trigger: AAGCCCGACCACCGTGTCTCACAGGGAAACTGACAC...AAGGCAGAGGAGTTGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp GGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTGTCAGTTTCCCTGTaGGACACGGTGGTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: GEHGACPGHCLRDTFIVRVSVSL*DTVVGL
Trigger: AAGCCCGACCACCGTGTCTCACAGGGAAACTGACAC...CCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp CTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCCGCCAGCTCCACACTTaGAGGGAGGGATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: LSFCCGPTFIGSCCPVTARQLHT*REGSIW
Trigger: CCAAATGGATCCCTCCCTGCAAGTGTGGAGCTGGCG...GGCCGTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp CCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGGTGGGCAGCGCCCTCTaGCTGTGTCTTAGACGCATG +
Preference number: 4 (lower is better)
Translates to: PDIVCGTPSSLGSQRPGLVGSAL*LCLRRM
Trigger: CATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCAC...CAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp GGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTTGGGAGAGCATGGTaGCTGCCCCGGACATTGTCT +
Preference number: 4 (lower is better)
Translates to: GEHGACPGHCLRDTFIVRVGRAW*LPRTLS
Trigger: AGACAATGTCCGGGGCAGGCACCATGCTCTCCCAAC...CCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGGTTTGGCGCCAGGTCTaGGGGAAGGACCGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PDIVCGTPSSLGSQRPGLVWRQV*GKDRLL
Trigger: AAGCAGACGGTCCTTCCCCCAGACCTGGCGCCAAAC...CAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GGATCCATTTGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTGAGACACGGTGGTCCGTCGCCAGCGTGGTaGGCAGCGCCCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GSIWKFASGVSFPVRHGGPSPAW*AAPSAC
Trigger: ACAGGCAGAGGGCGCTGCCCACCACGCTGGCGACGG...ACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GGATCCATTTGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTGAGACACGGTGGTGCTGACTGCAGCCAGTaGGGGCCCTGGGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GSIWKFASGVSFPVRHGGADCSQ*GPWGLS
Trigger: GGACAGGCCCCAGGGCCCCCACTGGCTGCAGTCAGC...ACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGTGGCCACGGGTGCTTACGGATGGGAGGGGACATaGCGCTGGGCCCATGACCAT +
Preference number: 4 (lower is better)
Translates to: GSIDSSQACVAKVATGAYGWEGT*RWAHDH
Trigger: ATGGTCATGGGCCCAGCGCCATGTCCCCTCCCATCC...GTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp TTGTGTGGTTGCCATGGCCACCAGGTGTCCAATAATAGGCCTTGTTCTCCCAGCGGTCCTGTTGTCCCGTaGCGGCCTCGCCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LCGCHGHQVSNNRPCSPSGPVVP*RPRLLP
Trigger: TGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACC...GCTGGGAGAACAAGGCCTATTATTGGACACCTGGTGGCCATGGCAACCACACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp GGCCCTGGGGCCTGTCCCAGGCATGAGCAAGGTCCTTGGGCGCTGTCCCAGGCATTTAGGTTGTTTTGCTaGCCTAGAAGACTGGATGCT +
Preference number: 4 (lower is better)
Translates to: GPGACPRHEQGPWALSQAFRLFC*PRRLDA
Trigger: AGCATCCAGTCTTCTAGGGCAGCAAAACAACCTAAA...TGCCTGGGACAGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCCCCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp CCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGGCATCCTTGTGTGGTTaGCATGGCCACCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PDIVCGTPSSLGSQRPGLASLCG*HGHQVS
Trigger: GGACACCTGGTGGCCATGGCAACCACACAAGGATGC...CAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp CATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGCCCCGGACATTGTCTaGGGGACACCTTCATCGTTA +
Preference number: 4 (lower is better)
Translates to: HLAVVGWESMVPAPDIVCAPDIV*GTPSSL
Trigger: TAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGC...GCAGACAATGTCCGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCACCACCCAGATaGCCTCAGCTCGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: GGFRFSVPTQLLQYHQPPPPPPR*PQLGWP
Trigger: GGGCCATCCGAGCTGAGGCCATCTGGGTGGTGGTGG...TGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp GATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCACCACCACCCAGATaGCCTCAGCTCGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: DSDSASRLSYSSTISHHHPPPPR*PQLGWP
Trigger: GGGCCATCCGAGCTGAGGCCATCTGGGTGGTGGTGG...GTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp CCTGGAGGGACTCATCGGATCCGCCAGGAGCTCAGCGTCCTGGGTAGAGGTTTCTCTCTCCTTTTGCTGTaGGCCCACCTTCATAGGGTC +
Preference number: 4 (lower is better)
Translates to: PGGTHRIRQELSVLGRGFSLLLL*AHLHRV
Trigger: GACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGA...GAAACCTCTACCCAGGACGCTGAGCTCCTGGCGGATCCGATGAGTCCCTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGGCTTTCACTCCAGTTTaGCGCCAGGTCTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PDIVCGTPSSLGSQRPGLAFTPV*RQVWGK
Trigger: CTTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGC...CAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCTCAGGCATCCTTGTGTaGTTGCCATGGCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: LSFCCGPTFIGSCCPVTASGILV*LPWPPG
Trigger: ACCTGGTGGCCATGGCAACCACACAAGGATGCCTGA...GGCCGTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGAGCCAGTGCAAGAGCTaGAGCTCCTTGAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: VCGTPSSLGSQRPGLLRTSQCKS*SSLKPT
Trigger: TGTGGGCTTCAAGGAGCTCCAGCTCTTGCACTGGCT...CGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGAAACTGTGGCATGTGTGGCAAAAGTaGCCACGGGTGCTTACCCCC +
Preference number: 4 (lower is better)
Translates to: WQKWPRVLTPCPEFLKLWHVWQK*PRVLTP
Trigger: GGGGGTAAGCACCCGTGGCCACTTTTGCCACACATG...CCACAGTTTCAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp CGGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGTGGCCACGACACCCGCAGCCCTGTaGTTTCATGGTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: REPGSIDSSQACVAKVATTPAAL*FHGRSL
Trigger: AAGACTACGACCATGAAATCACAGGGCTGCGGGTGT...CGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp CTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCACACCCGCAGCCCTGTaGTTTCATGGTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSFCCGPTFIGSCCPVTATPAAL*FHGRSL
Trigger: AAGACTACGACCATGAAATCACAGGGCTGCGGGTGT...GGCCGTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp GCTCTAGAATCATCTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGGGCCTGTCCCAGGCATaGGCAAGGTCCTTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: ALESSLLLLWAHLHRVLLGLSQA*ARSLGA
Trigger: AGCGCCCAAGGACCTTGCTCATGCCTGGGACAGGCC...CAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTCTAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp AGCATCAGCGGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGGCTTACCCCCTGCCCTaGGTTCCTGAAACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SISGSQEASTVARHVWQKAYPLP*VPETVG
Trigger: TCCCACAGTTTCAGGAACTCAGGGCAGGGGGTAAGC...CTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCCGCTGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp AGGCATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGGGACAGACTTTCCCCTaGCTTTCCTATCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: RHVWQKWPRVLTPCPEFLGQTFP*LSYQAW
Trigger: CCATGCCTGATAGGAAAGTCAGGGGAAAGTCTGTCC...CAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR GCA 90 bp TTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAGATGGGATACTGGCCATAGATaGCCACCAGCACCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: FSVPTQLLQYHQPPPPRWDTGHR*PPAPAP
Trigger: AGGGGCAGGTGCTGGTGGGCATCTATGGCCAGTATC...CCATCTGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR GCA 90 bp CAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAGGATACTGGCCATAGATaGCCACCAGCACCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: QIQRPDSVTPVPSATTTQDTGHR*PPAPAP
Trigger: AGGGGCAGGTGCTGGTGGGCATCTATGGCCAGTATC...CTGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR GCA 90 bp CCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGGCCCCGGACATTGTCTaGGGGACACCTTCATCGTTA +
Preference number: 4 (lower is better)
Translates to: PDIVCGTPSSLGSQRPGLAPDIV*GTPSSL
Trigger: TAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGC...CAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp CATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGAAACGGGTGCTTACCCCCTaGCCTGAGTTCCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: HVWQKWPRVLTPCPEFLKRVLTP*PEFLKL
Trigger: CAGTTTCAGGAACTCAGGGCAGGGGGTAAGCACCCG...TTTCAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CCA 90 bp TTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCTCTCCTGGGCCCCCTaGGCCCCCATCCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LVDSDSASRLSYSSTISHLSWAP*APIQKE
Trigger: TTCCTTCTGGATGGGGGCCCAGGGGGCCCAGGAGAG...GTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
CDS-3UTR CCA 90 bp TCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCACCTGCCCCTCTTGGCTaGGGTAGGCAGAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: SDSASRLSYSSTISHHHPPAPLG*GRQRRS
Trigger: AGATCTCCTCTGCCTACCCCAGCCAAGAGGGGCAGG...TGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp AATAATAGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCAGGAGCTCAGCGTCCTaGGTAGAGGTTTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: NNRPCSPSSGPRSVHTFPRSSAS*VEVSGL
Trigger: GAGGCCAGAAACCTCTACCCAGGACGCTGAGCTCCT...GGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCTATTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGGCCTTCATCCCAGGGTaGACGGTGTCCTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: SLQKHLAVVGWESMVPAPAFIPG*TVSWRD
Trigger: GTCCCTCCAGGACACCGTCCACCCTGGGATGAAGGC...CGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GCTCTAGAATCATCTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGGCCACTCGCCTGCCCTaGAGGTGGCTGTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ALESSLLLLWAHLHRVLLATRLP*RWLSGA
Trigger: TGCTCCTGACAGCCACCTCCAGGGCAGGCGAGTGGC...CAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTCTAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GTGGGCAGCGCCCTCTGCCTGTGTCTTAGACGCATGGCCAGAGCAGTGCCTGGTTTGGAAGTTCGCATCTaGTGTCAGTTTCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VGSALCLCLRRMARAVPGLEVRI*CQFPCE
Trigger: CTCACAGGGAAACTGACACCAGATGCGAACTTCCAA...ACCAGGCACTGCTCTGGCCATGCGTCTAAGACACAGGCAGAGGGCGCTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp AGCATCAGCGGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGGTAGCCAGGCATGTGTaGCAAAAGTGGCCACGGGTG +
Preference number: 4 (lower is better)
Translates to: SISGSQEASTVARHVWQKVARHV*QKWPRV
Trigger: CACCCGTGGCCACTTTTGCCACACATGCCTGGCTAC...CTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCCGCTGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp GCTCTAGAATCATCTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGCATGAACAGGGGCTTTaGGGCCGTCGCCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: ALESSLLLLWAHLHRVLLHEQGL*GRRQRG
Trigger: ACCACGCTGGCGACGGCCTCAAAGCCCCTGTTCATG...CAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTCTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp TGCAAGAGCTGGAGCTCCTTGAAGCCCACAGATTTTCAGTCTCAGGCATCCTTGCATGAACAGGGGCTTTaGGGCCGTCGCCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: CKSWSSLKPTDFQSQASLHEQGL*GRRQRG
Trigger: ACCACGCTGGCGACGGCCTCAAAGCCCCTGTTCATG...CAAGGATGCCTGAGACTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp CGGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGTGGCCACGGGGGCCATTTTTGGTTaGGTTGAGCTTGGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: REPGSIDSSQACVAKVATGAIFG*VELGLK
Trigger: CTTCAACCCAAGCTCAACTCAACCAAAAATGGCCCC...CGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp CATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGAAAGTCAGTGGTCCACTCTaGCCCTTACCTCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HVWQKWPRVLTPCPEFLKVSGPL*PLPPVF
Trigger: GAAGACAGGAGGTAAGGGTCAGAGTGGACCACTGAC...TTTCAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR GCA 90 bp AGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAGAGATACTGGCCATAGATaGCCACCAGCACCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RFSVPTQLLQYHQPPPPRDTGHR*PPAPAP
Trigger: AGGGGCAGGTGCTGGTGGGCATCTATGGCCAGTATC...TCTGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp CATAGGGTCCTGTTGTCCCGTGACGGCCTCGCCTCCTTCCAACTCCTCTGCCTTGCACCCTCAGCTGGGTaGCCTCTTAGAAAATTTAGG +
Preference number: 4 (lower is better)
Translates to: HRVLLSRDGLASFQLLCLAPSAG*PLRKFR
Trigger: CCTAAATTTTCTAAGAGGCCACCCAGCTGAGGGTGC...AAGGCAGAGGAGTTGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACCCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CATAGGGTCCTGTTGTCCCGTGACGGCCTCGCCTCCTTCCAACTCCTCTGCCTTAGGGAGGGATCCATTTaGAAGTTCGCATCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: HRVLLSRDGLASFQLLCLREGSI*KFASGV
Trigger: GACACCAGATGCGAACTTCCAAATGGATCCCTCCCT...AAGGCAGAGGAGTTGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp ACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCTCGCCTCCTTCCAACTCCTCTTGTGTCTTAGACGCATaGCCAGAGCAGTGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: TFIGSCCPVTASPPSNSSCVLDA*PEQCLV
Trigger: TACCAGGCACTGCTCTGGCCATGCGTCTAAGACACA...AGAGGAGTTGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACCCTATGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp AGCATCAGCGGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGACACCCGCAGCCCTGTaGTTTCATGGTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SISGSQEASTVARHVWQKTPAAL*FHGRSL
Trigger: AAGACTACGACCATGAAATCACAGGGCTGCGGGTGT...CTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCCGCTGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp CAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAGACACCCGCAGCCCTGTaGTTTCATGGTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: QIQRPDSVTPVPSATTTQTPAAL*FHGRSL
Trigger: AAGACTACGACCATGAAATCACAGGGCTGCGGGTGT...CTGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR GCA 90 bp GATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACGATACTGGCCATAGATaGCCACCAGCACCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: DSDSASRLSYSSTISHHHDTGHR*PPAPAP
Trigger: AGGGGCAGGTGCTGGTGGGCATCTATGGCCAGTATC...GTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR GCA 90 bp CCACAGATTTTCAGTCTCAGGCATCCTTGTGTGGTTGCCATGGCCACCAGGTGTCGCCAGCTCCACACTTaGAGGGAGGGATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PQIFSLRHPCVVAMATRCRQLHT*REGSIW
Trigger: CCAAATGGATCCCTCCCTGCAAGTGTGGAGCTGGCG...ACACCTGGTGGCCATGGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp AAATGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGCAGCAGCATGGCCTCTaGCCGGTGCATCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KWPWTSASNTSATHIQSVQQHGL*PVHPRA
Trigger: AGCCCTGGGATGCACCGGCCAGAGGCCATGCTGCTG...CACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CCA 90 bp TTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAGATGGTGCAGGGTGACTTCCTaGGTATTCCCACCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: FSVPTQLLQYHQPPPPRWCRVTS*VFPPKA
Trigger: AGCCTTAGGTGGGAATACCCAGGAAGTCACCCTGCA...CCATCTGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCCTGCCCCTCTTGGCTaGGGTAGGCAGAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LVDSDSASRLSYSSTISHPAPLG*GRQRRS
Trigger: AGATCTCCTCTGCCTACCCCAGCCAAGAGGGGCAGG...GTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAGATGGTGTGAGATTAACTGGTaGCTCAGTGGTCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FSVPTQLLQYHQPPPPRWCEINW*LSGRLL
Trigger: GAGGAGCCGACCACTGAGCCACCAGTTAATCTCACA...CCATCTGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGCCCTGTGAGACACGGTaGTCGGGCTTTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLQKHLAVVGWESMVPAPPCETR*SGFHSS
Trigger: ACTGGAGTGAAAGCCCGACCACCGTGTCTCACAGGG...CGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp GGAAGCATCAGCGGGAGCCAGGAAGCATCGACAGTAGCCAGGCATGTGTGGCAACTTTCCTATCAGGCATaGGGACAGAGGGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: GSISGSQEASTVARHVWQLSYQA*GQRGHF
Trigger: AAAATGGCCCCTCTGTCCCCATGCCTGATAGGAAAG...TTGCCACACATGCCTGGCTACTGTCGATGCTTCCTGGCTCCCGCTGATGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CCA 90 bp AGGCATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGCTCATATTCAGTCAGTaGTCCACTCTGACCCTTACC +
Preference number: 4 (lower is better)
Translates to: RHVWQKWPRVLTPCPEFLLIFSQ*STLTLT
Trigger: GGTAAGGGTCAGAGTGGACCACTGACTGAATATGAG...CAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR CAA 72 bp GTAGCGCCAGCTCCACACTTGCAGGGAGGGATCCATTaGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VAPAPHLQGGIH*EVRIWCQFPCE
Trigger: CTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCCCTCCCTGCAAGTGTGGAGCTGGCGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp AATAATAGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCAGTCTTCAGTGGTGCTaGAATACTTGCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NNRPCSPSSGPRSVHTFPSLQWC*NTCLLQ
Trigger: CTGGAGGAGGCAAGTATTTCAGCACCACTGAAGACT...GGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCTATTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp CATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGAAAAGTCTTCAGTGGTGCTaGAATACTTGCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HVWQKWPRVLTPCPEFLKSLQWC*NTCLLQ
Trigger: CTGGAGGAGGCAAGTATTTCAGCACCACTGAAGACT...TTTCAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp GGAAGCATCGACAGTAGCCAGGCATGTGTGGCAAAAGTGGCCACGGGTGCTTACAGTCTTCAGTGGTGCTaGAATACTTGCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSIDSSQACVAKVATGAYSLQWC*NTCLLQ
Trigger: CTGGAGGAGGCAAGTATTTCAGCACCACTGAAGACT...GTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGATGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp TCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAACACCCGCAGCCCTGTaGTTTCATGGTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SDSASRLSYSSTISHHHPTPAAL*FHGRSL
Trigger: AAGACTACGACCATGAAATCACAGGGCTGCGGGTGT...TGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp TTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCGCCTGGCTGCAGGGTaGCTTCCTGGGTATTCCCAC +
Preference number: 4 (lower is better)
Translates to: LLVDSDSASRLSYSSTISRLAAG*LPGYSH
Trigger: GTGGGAATACCCAGGAAGTCACCCTGCAGCCAGGCG...GCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp TTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACAGAAGAGAGGCCTCCTaGCTCCAAAGCAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LVDSDSASRLSYSSTISHRREAS*LQSKGQ
Trigger: CTGGCCCTTGCTTTGGAGTCAGGAGGCCTCTCTTCT...GTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572863.1
ENST00000634906.1
CDS-3UTR GCA 90 bp AGGTTGTTTTGCTGCCCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTTGGGGGGAAGGACCGTCTaGTTGGGTGGGGCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: RLFCCPRRLDALESSLLLGGRTV*LGGAQS
Trigger: CGACTGCGCCCCACCCAAGCAGACGGTCCTTCCCCC...CAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp GCTCTAGAATCATCTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGGCATCCTTGTGTGGTTaGCATGGCCACCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ALESSLLLLWAHLHRVLLASLCG*HGHQVS
Trigger: GGACACCTGGTGGCCATGGCAACCACACAAGGATGC...CAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTCTAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCATGCAGGGTGACTTCCTaGGTATTCCCACCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SDSASRLSYSSTISHHHPCRVTS*VFPPKA
Trigger: AGCCTTAGGTGGGAATACCCAGGAAGTCACCCTGCA...TGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp AGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAGATGTGATGTATTCGCCTaGCTGCAGGGTGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: RFSVPTQLLQYHQPPPPRCDVFA*LQGDFL
Trigger: CAGGAAGTCACCCTGCAGCCAGGCGAATACATCACA...TCTGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGTCAGGCATCCTTGTGTaGTTGCCATGGCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: SLQKHLAVVGWESMVPAPSGILV*LPWPPG
Trigger: ACCTGGTGGCCATGGCAACCACACAAGGATGCCTGA...CGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGTCCATGTGTGGCAAAAGTaGCCACGGGTGCTTACCCCC +
Preference number: 4 (lower is better)
Translates to: WPWTSASNTSATHIQSVVHVWQK*PRVLTP
Trigger: GGGGGTAAGCACCCGTGGCCACTTTTGCCACACATG...GACCACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CCA 90 bp CATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGAAACTTTCCTATCAGGCATaGGGACAGAGGGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: HVWQKWPRVLTPCPEFLKLSYQA*GQRGHF
Trigger: AAAATGGCCCCTCTGTCCCCATGCCTGATAGGAAAG...TTTCAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp GGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCAACACCCGCAGCCCTGTaGTTTCATGGTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GGFRFSVPTQLLQYHQPPTPAAL*FHGRSL
Trigger: AAGACTACGACCATGAAATCACAGGGCTGCGGGTGT...TGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp TATTGTTCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCGCTGTCCCAGGCATaGACAGGGGCTTTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: YCSLQKHLAVVGWESMVPALSQA*TGALRP
Trigger: CGGCCTCAAAGCCCCTGTTCATGCCTGGGACAGCGC...AGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGAACAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp AATGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGGCTTACCCCCTGCCCTaGGTTCCTGAAACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: NGPGLLPLTLLRLIFSQWAYPLP*VPETVG
Trigger: TCCCACAGTTTCAGGAACTCAGGGCAGGGGGTAAGC...CCACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR GCA 90 bp CCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCTGGGCGTCTGGTTGTaGCGGGCACCCTCCACATCG +
Preference number: 4 (lower is better)
Translates to: PLFIGGFRFSVPTQLLQYLGVWL*RAPSTS
Trigger: CGATGTGGAGGGTGCCCGGCACAACCAGACGCCCAG...GTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
CDS-3UTR GCA 90 bp CCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGAATCATCTCTCCTTTTaGTGTGGGCCCACCTTCATA +
Preference number: 4 (lower is better)
Translates to: PDIVCGTPSSLGSQRPGLNHLSF*CGPTFI
Trigger: TATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATT...CAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp CTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGTCCACTCTGACCCTTAAAAGTGGCCACGGGTaGTTACCCCCTGCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LPLTLLRLIFSQWSTLTLKSGHG*LPPALS
Trigger: ACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTT...AAGGGTCAGAGTGGACCACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CCA 90 bp ATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCTCTCGCCTGTGACTaGGCGTCTGGTTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: IYWWIQIQRPDSVTPVPSALACD*ASGCAG
Trigger: CCCGGCACAACCAGACGCCCAGTCACAGGCGAGAGC...TGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
CDS-3UTR CCA 90 bp TATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCCAGCAGCATGGCCTCTaGCCGGTGCATCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: YLLVDSDSASRLSYSSTIQQHGL*PVHPRA
Trigger: AGCCCTGGGATGCACCGGCCAGAGGCCATGCTGCTG...GATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp GCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCCACCACCACCCAGATaGCCTCAGCTCGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: AEPLFIGGFRFSVPTQLLPPPPR*PQLGWP
Trigger: GGGCCATCCGAGCTGAGGCCATCTGGGTGGTGGTGG...GAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp CCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGGCATCAGTTTGCGAATaGATTCTCCAGCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: PDIVCGTPSSLGSQRPGLASVCE*ILQLFT
Trigger: AGTGAAGAGCTGGAGAATCCATTCGCAAACTGATGC...CAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp AGGTTGTTTTGCTGCCCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTTGCAGGTGAGTGGGCAGTaGAGCCGTCACCCTGACGCC +
Preference number: 4 (lower is better)
Translates to: RLFCCPRRLDALESSLLLQVSGQ*SRHPDA
Trigger: GGCGTCAGGGTGACGGCTCCACTGCCCACTCACCTG...CAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGAAACTGTGGGATCTCATATTCAGTCAGTaGTCCACTCTGACCCTTACC +
Preference number: 4 (lower is better)
Translates to: QKWPRVLTPCPEFLKLWDLIFSQ*STLTLT
Trigger: GGTAAGGGTCAGAGTGGACCACTGACTGAATATGAG...ATCCCACAGTTTCAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp ATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCACGCCTGGCTGCAGGGTaGCTTCCTGGGTATTCCCAC +
Preference number: 4 (lower is better)
Translates to: IYWWIQIQRPDSVTPVPSRLAAG*LPGYSH
Trigger: GTGGGAATACCCAGGAAGTCACCCTGCAGCCAGGCG...TGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp TTGTGTGGTTGCCATGGCCACCAGGTGTCCAATAATAGGCCTTGTTCTCCCAGCAGAGCTGGAGCTCCTTaGAGCCCACAGATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LCGCHGHQVSNNRPCSPSRAGAP*SPQIFS
Trigger: ACTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCT...GCTGGGAGAACAAGGCCTATTATTGGACACCTGGTGGCCATGGCAACCACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp CTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGTCCACTCTGACCCTTGTCAGTGGTCCACTCTaGCCCTTACCTCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LPLTLLRLIFSQWSTLTLVSGPL*PLPPVF
Trigger: GAAGACAGGAGGTAAGGGTCAGAGTGGACCACTGAC...AAGGGTCAGAGTGGACCACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR GCA 90 bp TGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCTGGGCGTCTGGTTGTaGCGGGCACCCTCCACATCG +
Preference number: 4 (lower is better)
Translates to: CRTFIYWWIQIQRPDSVTLGVWL*RAPSTS
Trigger: CGATGTGGAGGGTGCCCGGCACAACCAGACGCCCAG...AGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
CDS-3UTR GCA 90 bp TGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACTTTCATGCATCAGTTTaGGAATGGATTCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CLRDTFIVRVTASRLAQDFHASV*EWILQL
Trigger: GAGCTGGAGAATCCATTCGCAAACTGATGCATGAAA...GTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp AGGTTGTTTTGCTGCCCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTTGGCATGGCCAGAGCAGTaGCTGGTAGCGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLFCCPRRLDALESSLLLAWPEQ*LVAPAP
Trigger: TGGAGCTGGCGCTACCAGGCACTGCTCTGGCCATGC...CAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TGCACTGATTCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGGGAACAGGAAGGAGCTaGCCGTGGGGCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: CTDSAEPLFIGGFRFSVPGTGRS*PWGSSW
Trigger: CCAGGAAGAGCCCCACGGCCAGCTCCTTCCTGTTCC...CGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGAATCAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
CDS-3UTR CCA 90 bp AGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCACTCTCCTGGGCCCCCTaGGCCCCCATCCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: RTFIYWWIQIQRPDSVTPLSWAP*APIQKE
Trigger: TTCCTTCTGGATGGGGGCCCAGGGGGCCCAGGAGAG...TGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
CDS-3UTR CCA 90 bp GCACTGATTCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGAGCCTTTATACTCTCCTaGGCCCCCTGGGCCCCCATC +
Preference number: 4 (lower is better)
Translates to: ALILQNLYLLVDSDSASRAFILS*APWAPI
Trigger: GATGGGGGCCCAGGGGGCCCAGGAGAGTATAAAGGC...TCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGAATCAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
CDS-3UTR CCA 90 bp TTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCAGCTCTCGCCTGTGACTaGGCGTCTGGTTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: FIYWWIQIQRPDSVTPVPALACD*ASGCAG
Trigger: CCCGGCACAACCAGACGCCCAGTCACAGGCGAGAGC...TGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
CDS-3UTR CCA 90 bp AGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCACAGCAGCATGGCCTCTaGCCGGTGCATCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RTFIYWWIQIQRPDSVTPQQHGL*PVHPRA
Trigger: AGCCCTGGGATGCACCGGCCAGAGGCCATGCTGCTG...TGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCCACCACCACCCAGATaGCCTCAGCTCGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: LFIGGFRFSVPTQLLQYHPPPPR*PQLGWP
Trigger: GGGCCATCCGAGCTGAGGCCATCTGGGTGGTGGTGG...ATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp AGGTTGTTTTGCTGCCCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTTGGCCTTCATCCCAGGGTaGACGGTGTCCTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: RLFCCPRRLDALESSLLLAFIPG*TVSWRD
Trigger: GTCCCTCCAGGACACCGTCCACCCTGGGATGAAGGC...CAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CTGGCCTCTCAGCTTCTCTGTTTTGTCTCACAACTTTCTCTTGCTAATCACTTTGAGGTCGCAGGTGAGTaGGCAGTGGAGCCGTCACCC +
Preference number: 4 (lower is better)
Translates to: LASQLLCFVSQLSLANHFEVAGE*AVEPSP
Trigger: GGGTGACGGCTCCACTGCCCACTCACCTGCGACCTC...AAAGTGATTAGCAAGAGAAAGTTGTGAGACAAAACAGAGAAGCTGAGAGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TGCAAGAGCTGGAGCTCCTTGAAGCCCACAGATTTTCAGTCTCAGGCATCCTTGTGTGTCTTAGACGCATaGCCAGAGCAGTGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: CKSWSSLKPTDFQSQASLCVLDA*PEQCLV
Trigger: TACCAGGCACTGCTCTGGCCATGCGTCTAAGACACA...CAAGGATGCCTGAGACTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp AGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCACGCCTGGCTGCAGGGTaGCTTCCTGGGTATTCCCAC +
Preference number: 4 (lower is better)
Translates to: RTFIYWWIQIQRPDSVTPRLAAG*LPGYSH
Trigger: GTGGGAATACCCAGGAAGTCACCCTGCAGCCAGGCG...TGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp TTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCGCCTGGCTGCAGGGTaGCTTCCTGGGTATTCCCAC +
Preference number: 4 (lower is better)
Translates to: LFIGGFRFSVPTQLLQYHRLAAG*LPGYSH
Trigger: GTGGGAATACCCAGGAAGTCACCCTGCAGCCAGGCG...ATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp GATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCGACAAAGACTTTTGTaGTGTATTCGCCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: DSDSASRLSYSSTISHHHRQRLL*CIRLAA
Trigger: TGCAGCCAGGCGAATACATCACAAAAGTCTTTGTCG...GTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp GCTCTAGAATCATCTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGAGAGCTGGAGCTCCTTaGAGCCCACAGATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: ALESSLLLLWAHLHRVLLRAGAP*SPQIFS
Trigger: ACTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCT...CAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTCTAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp AATAATAGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCTTTCATGCATCAGTTTaGGAATGGATTCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: NNRPCSPSSGPRSVHTFPFHASV*EWILQL
Trigger: GAGCTGGAGAATCCATTCGCAAACTGATGCATGAAA...GGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCTATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp TTAAGGAAATGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGCGGGTGCTTACCCCCTaGCCTGAGTTCCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: LRKWPWTSASNTSATHIQRVLTP*PEFLKL
Trigger: CAGTTTCAGGAACTCAGGGCAGGGGGTAAGCACCCG...CTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCATTTCCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CCA 90 bp TTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCAGGAACAGGAAGGAGCTaGCCGTGGGGCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FIYWWIQIQRPDSVTPVPGTGRS*PWGSSW
Trigger: CCAGGAAGAGCCCCACGGCCAGCTCCTTCCTGTTCC...TGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
CDS-3UTR CCA 90 bp TCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCATCTCCAAGTTTCACCTaGACACTTTTCACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SDSASRLSYSSTISHHHPSPSFT*TLFTRR
Trigger: TCTCCTGGTGAAAAGTGTCCAGGTGAAACTTGGAGA...TGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp CTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCCCTGCCCCTCTTGGCTaGGGTAGGCAGAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LYLLVDSDSASRLSYSSTPAPLG*GRQRRS
Trigger: AGATCTCCTCTGCCTACCCCAGCCAAGAGGGGCAGG...GGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TGCAAGAGCTGGAGCTCCTTGAAGCCCACAGATTTTCAGTCTCAGGCATCCTTGGCACCCTCAGCTGGGTaGCCTCTTAGAAAATTTAGG +
Preference number: 4 (lower is better)
Translates to: CKSWSSLKPTDFQSQASLAPSAG*PLRKFR
Trigger: CCTAAATTTTCTAAGAGGCCACCCAGCTGAGGGTGC...CAAGGATGCCTGAGACTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp CCACAGATTTTCAGTCTCAGGCATCCTTGTGTGGTTGCCATGGCCACCAGGTGTTTGGAAGTTCGCATCTaGTGTCAGTTTCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PQIFSLRHPCVVAMATRCLEVRI*CQFPCE
Trigger: CTCACAGGGAAACTGACACCAGATGCGAACTTCCAA...ACACCTGGTGGCCATGGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
3UTR CAA 72 bp CCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTaGCTGTGGGCCCACCTTCATAGGGTCCTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: PRRLDALESSLL*LWAHLHRVLLS
Trigger: GGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp AATGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGGGGGCCATTTTTGGTTaGGTTGAGCTTGGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: NGPGLLPLTLLRLIFSQWGAIFG*VELGLK
Trigger: CTTCAACCCAAGCTCAACTCAACCAAAAATGGCCCC...CCACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCATT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp CCTGTCTTCTTTGACAGTAATCGGACAGACTTTCCCCTGACTTTCCTATCAGGCGGACAGACTTTCCCCTaGCTTTCCTATCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: PVFFDSNRTDFPLTFLSGGQTFP*LSYQAW
Trigger: CCATGCCTGATAGGAAAGTCAGGGGAAAGTCTGTCC...GCCTGATAGGAAAGTCAGGGGAAAGTCTGTCCGATTACTGTCAAAGAAGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CCA 90 bp GGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCATCTCCAAGTTTCACCTaGACACTTTTCACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GGFRFSVPTQLLQYHQPPSPSFT*TLFTRR
Trigger: TCTCCTGGTGAAAAGTGTCCAGGTGAAACTTGGAGA...TGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCCTGCCCCTCTTGGCTaGGGTAGGCAGAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LFIGGFRFSVPTQLLQYHPAPLG*GRQRRS
Trigger: AGATCTCCTCTGCCTACCCCAGCCAAGAGGGGCAGG...ATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp AGGTTGTTTTGCTGCCCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTTGAGGAGCTCAGCGTCCTaGGTAGAGGTTTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RLFCCPRRLDALESSLLLRSSAS*VEVSGL
Trigger: GAGGCCAGAAACCTCTACCCAGGACGCTGAGCTCCT...CAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TATTGTTCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCTTTCACTCCAGTTTaGCGCCAGGTCTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YCSLQKHLAVVGWESMVPAFTPV*RQVWGK
Trigger: CTTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGC...AGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGAACAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TTACCTCCTGTCTTCTTTGACAGTAATCGGACAGACTTTCCCCTGACTTTCCTAGTAGCCAGGCATGTGTaGCAAAAGTGGCCACGGGTG +
Preference number: 4 (lower is better)
Translates to: LPPVFFDSNRTDFPLTFLVARHV*QKWPRV
Trigger: CACCCGTGGCCACTTTTGCCACACATGCCTGGCTAC...TAGGAAAGTCAGGGGAAAGTCTGTCCGATTACTGTCAAAGAAGACAGGAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp CTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACCCTTGCTGGTGTACATaGCCATACCCCGGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LQNLYLLVDSDSASRLSYPCWCT*PYPGGK
Trigger: CTTTCCTCCGGGGTATGGTCATGTACACCAGCAAGG...GTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp CCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCCTTGCTGGTGTACATaGCCATACCCCGGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PLFIGGFRFSVPTQLLQYPCWCT*PYPGGK
Trigger: CTTTCCTCCGGGGTATGGTCATGTACACCAGCAAGG...GTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp TTCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTAGAAGAGAGGCCTCCTaGCTCCAAAGCAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FCRTFIYWWIQIQRPDSVRREAS*LQSKGQ
Trigger: CTGGCCCTTGCTTTGGAGTCAGGAGGCCTCTCTTCT...AACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572863.1
ENST00000634906.1
CDS-3UTR CCA 90 bp AGGTTGTTTTGCTGCCCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTTGAGCCAGTGCAAGAGCTaGAGCTCCTTGAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: RLFCCPRRLDALESSLLLSQCKS*SSLKPT
Trigger: TGTGGGCTTCAAGGAGCTCCAGCTCTTGCACTGGCT...CAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGTCTTAAGGAAATGGCCCTaGACTTCTGCCTCTAACACT +
Preference number: 4 (lower is better)
Translates to: WPWTSASNTSATHIQSVVLRKWP*TSASNT
Trigger: AGTGTTAGAGGCAGAAGTCCAGGGCCATTTCCTTAA...GACCACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
3UTR CAA 72 bp GCACCCTCAGCTGGGTGGCCTCTTAGAAAATTTAGGTaGTTTTGCTGCCCTAGAAGACTGGATGCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: APSAGWPLRKFR*FCCPRRLDALE
Trigger: TTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCTAAATTTTCTAAGAGGCCACCCAGCTGAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp TATTGTTCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTACACCCGCAGCCCTGTaGTTTCATGGTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: YCSLQKHLAVVGWESMVPTPAAL*FHGRSL
Trigger: AAGACTACGACCATGAAATCACAGGGCTGCGGGTGT...AGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGAACAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp TTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCGACAAAGACTTTTGTaGTGTATTCGCCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLVDSDSASRLSYSSTISRQRLL*CIRLAA
Trigger: TGCAGCCAGGCGAATACATCACAAAAGTCTTTGTCG...GCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp TTCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTCCTTGCTGGTGTACATaGCCATACCCCGGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: FCRTFIYWWIQIQRPDSVPCWCT*PYPGGK
Trigger: CTTTCCTCCGGGGTATGGTCATGTACACCAGCAAGG...AACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp CCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACTGCAGGGTGACTTCCTaGGTATTCCCACCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: PLFIGGFRFSVPTQLLQYCRVTS*VFPPKA
Trigger: AGCCTTAGGTGGGAATACCCAGGAAGTCACCCTGCA...GTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp GCACTGATTCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGATGTGATGTATTCGCCTaGCTGCAGGGTGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: ALILQNLYLLVDSDSASRCDVFA*LQGDFL
Trigger: CAGGAAGTCACCCTGCAGCCAGGCGAATACATCACA...TCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGAATCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
CDS-3UTR CCA 90 bp CTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCTGTGATGTATTCGCCTaGCTGCAGGGTGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: LYLLVDSDSASRLSYSSTCDVFA*LQGDFL
Trigger: CAGGAAGTCACCCTGCAGCCAGGCGAATACATCACA...GGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp CAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCTGTGAGATTAACTGGTaGCTCAGTGGTCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QNLYLLVDSDSASRLSYSCEINW*LSGRLL
Trigger: GAGGAGCCGACCACTGAGCCACCAGTTAATCTCACA...GGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp GCACTGATTCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGATGTGAGATTAACTGGTaGCTCAGTGGTCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALILQNLYLLVDSDSASRCEINW*LSGRLL
Trigger: GAGGAGCCGACCACTGAGCCACCAGTTAATCTCACA...TCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGAATCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382280.7
ENST00000634500.1
CDS-3UTR CCA 90 bp CTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGTCCACTCTGACCCTTTTAAGGAAATGGCCCTaGACTTCTGCCTCTAACACT +
Preference number: 4 (lower is better)
Translates to: LPLTLLRLIFSQWSTLTLLRKWP*TSASNT
Trigger: AGTGTTAGAGGCAGAAGTCCAGGGCCATTTCCTTAA...AAGGGTCAGAGTGGACCACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR TCA 90 bp GCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCAGTCTTCAGTGGTGCTaGAATACTTGCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AEPLFIGGFRFSVPTQLLSLQWC*NTCLLQ
Trigger: CTGGAGGAGGCAAGTATTTCAGCACCACTGAAGACT...GAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp CCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACAGTCTTCAGTGGTGCTaGAATACTTGCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLFIGGFRFSVPTQLLQYSLQWC*NTCLLQ
Trigger: CTGGAGGAGGCAAGTATTTCAGCACCACTGAAGACT...GTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp AGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAACACCCGCAGCCCTGTaGTTTCATGGTCGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: RTFIYWWIQIQRPDSVTPTPAAL*FHGRSL
Trigger: AAGACTACGACCATGAAATCACAGGGCTGCGGGTGT...TGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR GCA 90 bp TTCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTATGTATTCGCCTGGCTaGAGGGTGACTTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: FCRTFIYWWIQIQRPDSVMYSPG*RVTSWV
Trigger: TACCCAGGAAGTCACCCTGCAGCCAGGCGAATACAT...AACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR GCA 90 bp CCACAGATTTTCAGTCTCAGGCATCCTTGTGTGGTTGCCATGGCCACCAGGTGTAAATTTAGGTTGTTTTaGTGCCCTAGAAGACTGGAT +
Preference number: 4 (lower is better)
Translates to: PQIFSLRHPCVVAMATRCKFRLF*CPRRLD
Trigger: ATCCAGTCTTCTAGGGCAGCAAAACAACCTAAATTT...ACACCTGGTGGCCATGGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp TCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTGCCCCGAAATTTAGGTTGTTTTaGTGCCCTAGAAGACTGGAT +
Preference number: 4 (lower is better)
Translates to: SLQKHLAVVGWESMVPAPKFRLF*CPRRLD
Trigger: ATCCAGTCTTCTAGGGCAGCAAAACAACCTAAATTT...CGGGGCAGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCTCTCCAAGTTTCACCTaGACACTTTTCACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LLVDSDSASRLSYSSTISSPSFT*TLFTRR
Trigger: TCTCCTGGTGAAAAGTGTCCAGGTGAAACTTGGAGA...GCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTATGCAGGGTGACTTCCTaGGTATTCCCACCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SAEPLFIGGFRFSVPTQLCRVTS*VFPPKA
Trigger: AGCCTTAGGTGGGAATACCCAGGAAGTCACCCTGCA...TAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp AGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCATGTGATGTATTCGCCTaGCTGCAGGGTGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: RTFIYWWIQIQRPDSVTPCDVFA*LQGDFL
Trigger: CAGGAAGTCACCCTGCAGCCAGGCGAATACATCACA...TGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp ATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCACCCCGGAGGAAAGCTTaGAAGGCGACAAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: IYWWIQIQRPDSVTPVPSPRRKA*KATKTF
Trigger: AAAAGTCTTTGTCGCCTTCCAAGCTTTCCTCCGGGG...TGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp GCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCCCCGGAGGAAAGCTTaGAAGGCGACAAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: AEPLFIGGFRFSVPTQLLPRRKA*KATKTF
Trigger: AAAAGTCTTTGTCGCCTTCCAAGCTTTCCTCCGGGG...GAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTATGTGAGATTAACTGGTaGCTCAGTGGTCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SAEPLFIGGFRFSVPTQLCEINW*LSGRLL
Trigger: GAGGAGCCGACCACTGAGCCACCAGTTAATCTCACA...TAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAAGAACCTTTATTTATTaGTGGATTCAGATTCAGCGT +
Preference number: 4 (lower is better)
Translates to: SDSASRLSYSSTISHHHPRTFIY*WIQIQR
Trigger: ACGCTGAATCTGAATCCACCAATAAATAAAGGTTCT...TGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TATTGTTCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTAGGGAGGGATCCATTTaGAAGTTCGCATCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: YCSLQKHLAVVGWESMVPREGSI*KFASGV
Trigger: GACACCAGATGCGAACTTCCAAATGGATCCCTCCCT...AGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGAACAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR TCA 90 bp CTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACCGACAAAGACTTTTGTaGTGTATTCGCCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LQNLYLLVDSDSASRLSYRQRLL*CIRLAA
Trigger: TGCAGCCAGGCGAATACATCACAAAAGTCTTTGTCG...GTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACCCCGGAGGAAAGCTTaGAAGGCGACAAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: SAEPLFIGGFRFSVPTQLPRRKA*KATKTF
Trigger: AAAAGTCTTTGTCGCCTTCCAAGCTTTCCTCCGGGG...TAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR TCA 90 bp TCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACGACAAAGACTTTTGTaGTGTATTCGCCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SAEPLFIGGFRFSVPTQLRQRLL*CIRLAA
Trigger: TGCAGCCAGGCGAATACATCACAAAAGTCTTTGTCG...TAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp AGGTTGTTTTGCTGCCCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTTGGCATCAGTTTGCGAATaGATTCTCCAGCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: RLFCCPRRLDALESSLLLASVCE*ILQLFT
Trigger: AGTGAAGAGCTGGAGAATCCATTCGCAAACTGATGC...CAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR GCA 90 bp AGGTTGTTTTGCTGCCCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTTGTTTAGGTTGTTTTGCTaGCCTAGAAGACTGGATGCT +
Preference number: 4 (lower is better)
Translates to: RLFCCPRRLDALESSLLLFRLFC*PRRLDA
Trigger: AGCATCCAGTCTTCTAGGGCAGCAAAACAACCTAAA...CAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CCA 90 bp TCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTATCTCCAAGTTTCACCTaGACACTTTTCACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SAEPLFIGGFRFSVPTQLSPSFT*TLFTRR
Trigger: TCTCCTGGTGAAAAGTGTCCAGGTGAAACTTGGAGA...TAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp CCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACACCTTTATTTATTGGTaGATTCAGATTCAGCGTCCC +
Preference number: 4 (lower is better)
Translates to: PLFIGGFRFSVPTQLLQYTFIYW*IQIQRP
Trigger: GGGACGCTGAATCTGAATCCACCAATAAATAAAGGT...GTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCAGAACCTTTATTTATTaGTGGATTCAGATTCAGCGT +
Preference number: 4 (lower is better)
Translates to: LLVDSDSASRLSYSSTISRTFIY*WIQIQR
Trigger: ACGCTGAATCTGAATCCACCAATAAATAAAGGTTCT...GCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp ACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTAACCTTTATTTATTGGTaGATTCAGATTCAGCGTCCC +
Preference number: 4 (lower is better)
Translates to: TFIYWWIQIQRPDSVTPVTFIYW*IQIQRP
Trigger: GGGACGCTGAATCTGAATCCACCAATAAATAAAGGT...TACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp AGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAACCTTTATTTATTGGTaGATTCAGATTCAGCGTCCC +
Preference number: 4 (lower is better)
Translates to: RTFIYWWIQIQRPDSVTPTFIYW*IQIQRP
Trigger: GGGACGCTGAATCTGAATCCACCAATAAATAAAGGT...TGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCAACCTTTATTTATTGGTaGATTCAGATTCAGCGTCCC +
Preference number: 4 (lower is better)
Translates to: FIYWWIQIQRPDSVTPVPTFIYW*IQIQRP
Trigger: GGGACGCTGAATCTGAATCCACCAATAAATAAAGGT...TGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp TGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTAGAACCTTTATTTATTaGTGGATTCAGATTCAGCGT +
Preference number: 4 (lower is better)
Translates to: CRTFIYWWIQIQRPDSVTRTFIY*WIQIQR
Trigger: ACGCTGAATCTGAATCCACCAATAAATAAAGGTTCT...AGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CCA 90 bp ACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTAAGAACCTTTATTTATTaGTGGATTCAGATTCAGCGT +
Preference number: 4 (lower is better)
Translates to: TFIYWWIQIQRPDSVTPVRTFIY*WIQIQR
Trigger: ACGCTGAATCTGAATCCACCAATAAATAAAGGTTCT...TACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp TTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGGTCTTGGGCGATGTCTGTCCCGGAAGGACCGTCTGCTaGGGTGGGGCGCAGTCGGGC +
Preference number: 5 (lower is better)
Translates to: LGSQRPGLLRTVLGDVCPGRTVC*GGAQSG
Trigger: GCCCGACTGCGCCCCACCCAAGCAGACGGTCCTTCC...GGGACAGACATCGCCCAAGACCGTCCTGAGCAAGCCTGGACGCTGTGACCCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp CCCAAGGAGGAGAGGGGCTTTGAGGTCGCAGGTGAGTGGGCAGTGGAGCCGTCATCACAGCGTCCAGGCTaGCTCAGGACGGTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PKEERGFEVAGEWAVEPSSQRPG*LRTVLG
Trigger: GCCCAAGACCGTCCTGAGCAAGCCTGGACGCTGTGA...TGACGGCTCCACTGCCCACTCACCTGCGACCTCAAAGCCCCTCTCCTCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp GTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGCTTCATAGGGTCCTGTaGTCCCGTGACGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: VCGTPSSLGSQRPGLLRTLHRVL*SRDGLA
Trigger: GGCGAGGCCGTCACGGGACAACAGGACCCTATGAAG...CGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp CATAGGGTCCTGTTGTCCCGTGACGGCCTCGCCTCCTTCCAACTCCTCTGCCTTAGGAGGAGAGGGGCTTaGAGGTCGCAGGTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: HRVLLSRDGLASFQLLCLRRRGA*RSQVSG
Trigger: CCCACTCACCTGCGACCTCAAAGCCCCTCTCCTCCT...AAGGCAGAGGAGTTGGAAGGAGGCGAGGCCGTCACGGGACAACAGGACCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp CTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGTCCCGTGACGGCCTCACAGCGTCCAGGCTaGCTCAGGACGGTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LSFCCGPTFIGSCCPVTASQRPG*LRTVLG
Trigger: GCCCAAGACCGTCCTGAGCAAGCCTGGACGCTGTGA...GGCCGTCACGGGACAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp CCTGGAGGGACTCATCGGATCCGCCAGGAGCTCAGCGTCCTGGGTAGAGGTTTCTGCCTGCCCCGGACATaGTCTGCGGGACACCTTCAT +
Preference number: 5 (lower is better)
Translates to: PGGTHRIRQELSVLGRGFCLPRT*SAGHLH
Trigger: ATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCA...GAAACCTCTACCCAGGACGCTGAGCTCCTGGCGGATCCGATGAGTCCCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp AGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCCACCACGTGGTGCTGAAATACTaGCCTCCTCCAGGGCCATAC +
Preference number: 5 (lower is better)
Translates to: RPCSPSSGPRSVHTFPHHVVLKY*PPPGPY
Trigger: GTATGGCCCTGGAGGAGGCAAGTATTTCAGCACCAC...GTGGTGGGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp TGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACAGGAGGAGAGGGGCTTaGAGGTCGCAGGTGAGTGGG +
Preference number: 5 (lower is better)
Translates to: CLRDTFIVRVTASRLAQDRRRGA*RSQVSG
Trigger: CCCACTCACCTGCGACCTCAAAGCCCCTCTCCTCCT...GTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp GGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGGCTTTCACTCCAGTTaGGCGCCAGGTCTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: GEHGACPGHCLRDTFIVRGFHSS*APGLGE
Trigger: TTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGCC...CCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp TCGACAGTAGCCAGGCATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCGTGGTGCTGAAATACTaGCCTCCTCCAGGGCCATAC +
Preference number: 5 (lower is better)
Translates to: STVARHVWQKWPRVLTPCVVLKY*PPPGPY
Trigger: GTATGGCCCTGGAGGAGGCAAGTATTTCAGCACCAC...GCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTACTGTCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CAA 90 bp GGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACAGCACCTGCCCCTCTaGGCTGGGGTAGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GGFRFSVPTQLLQYHQPPQHLPL*AGVGRG
Trigger: TCCTCTGCCTACCCCAGCCAAGAGGGGCAGGTGCTG...TGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp CAGGTGAGTGGGCAGTGGAGCCGTCACCCTGACGCCTCAGCCCTCCCCGGGGGCCTTAGAAAATTTAGGTaGTTTTGCTGCCCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: QVSGQWSRHPDASALPGGLRKFR*FCCPRR
Trigger: TCTTCTAGGGCAGCAAAACAACCTAAATTTTCTAAG...GCCCCCGGGGAGGGCTGAGGCGTCAGGGTGACGGCTCCACTGCCCACTCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp AGGCCTTGTTCTCCCAGCTCCGGCCCACGGAGTGTCCATACCTTCCCCCACCACAAGAGCTGGAGCTCCTaGAAGCCCACAGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: RPCSPSSGPRSVHTFPHHKSWSS*KPTDFQ
Trigger: CTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCTT...GTGGTGGGGGAAGGTATGGACACTCCGTGGGCCGGAGCTGGGAGAACAAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp GTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGCAGGGAGGGATCCATTaGGAAGTTCGCATCTGGTGT +
Preference number: 5 (lower is better)
Translates to: VCGTPSSLGSQRPGLLRTQGGIH*EVRIWC
Trigger: ACACCAGATGCGAACTTCCAAATGGATCCCTCCCTG...CGTCCTGAGCAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp GTAGCCAGGCATGTGTGGCAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGACAGAGGGGCCATTTTaGGTTGAGTTGAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: VARHVWQKWPRVLTPCPETEGPF*VELSLG
Trigger: ACCCAAGCTCAACTCAACCAAAAATGGCCCCTCTGT...CTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTGCCACACATGCCTGGCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CAA 90 bp GGATCCATTTGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTGAGACACGGTGGTCTTCATAGGGTCCTGTaGTCCCGTGACGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: GSIWKFASGVSFPVRHGGLHRVL*SRDGLA
Trigger: GGCGAGGCCGTCACGGGACAACAGGACCCTATGAAG...ACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS CCA 90 bp GTTGATACTGGCCATAGATGCCCACCAGCACCTGCCCCTCTTGGCTaGGGTAGGCAGAGGAGATCTGGCCATCAAGCTTCCCAAAATAGA +
Preference number: 5 (lower is better)
Translates to: VDTGHRCPPAPAPLG*GRQRRSGHQASQNR
Trigger: TCTATTTTGGGAAGCTTGATGGCCAGATCTCCTCTGCCTACCCCAGCCAAGAGGGGCAGGTGCTGGTGGGCATCTATGGCCAGTATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp TTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCAGCACCTGCCCCTCTaGGCTGGGGTAGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: LLVDSDSASRLSYSSTISQHLPL*AGVGRG
Trigger: TCCTCTGCCTACCCCAGCCAAGAGGGGCAGGTGCTG...GCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp GGATCCATTTGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTGAGACACGGTGGTGGCTTTCACTCCAGTTaGGCGCCAGGTCTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: GSIWKFASGVSFPVRHGGGFHSS*APGLGE
Trigger: TTCCCCCAGACCTGGCGCCAAACTGGAGTGAAAGCC...ACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp GCTCTAGAATCATCTCTCCTTTTGCTGTGGGCCCACCTTCATAGGGTCCTGTTGGGCATCCTTGTGTGGTaGCCATGGCCACCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: ALESSLLLLWAHLHRVLLGILVW*PWPPGV
Trigger: GACACCTGGTGGCCATGGCAACCACACAAGGATGCC...CAACAGGACCCTATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTCTAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp GGATCCATTTGGAAGTTCGCATCTGGTGTCAGTTTCCCTGTGAGACACGGTGGTGGCATCCTTGTGTGGTaGCCATGGCCACCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: GSIWKFASGVSFPVRHGGGILVW*PWPPGV
Trigger: GACACCTGGTGGCCATGGCAACCACACAAGGATGCC...ACCACCGTGTCTCACAGGGAAACTGACACCAGATGCGAACTTCCAAATGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp CCGGACATTGTCTGCGGGACACCTTCATCGTTAGGGTCACAGCGTCCAGGCTTGAAGAGCTGGAGCTCCTaGAAGCCCACAGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: PDIVCGTPSSLGSQRPGLKSWSS*KPTDFQ
Trigger: CTGAAAATCTGTGGGCTTCAAGGAGCTCCAGCTCTT...CAAGCCTGGACGCTGTGACCCTAACGATGAAGGTGTCCCGCAGACAATGTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp GGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCAGTGGTGCTGAAATACTaGCCTCCTCCAGGGCCATAC +
Preference number: 5 (lower is better)
Translates to: GGFRFSVPTQLLQYHQPPVVLKY*PPPGPY
Trigger: GTATGGCCCTGGAGGAGGCAAGTATTTCAGCACCAC...TGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp CTGGCCTCTCAGCTTCTCTGTTTTGTCTCACAACTTTCTCTTGCTAATCACTTTGGAAGGACCGTCTGCTaGGGTGGGGCGCAGTCGGGC +
Preference number: 5 (lower is better)
Translates to: LASQLLCFVSQLSLANHFGRTVC*GGAQSG
Trigger: GCCCGACTGCGCCCCACCCAAGCAGACGGTCCTTCC...AAAGTGATTAGCAAGAGAAAGTTGTGAGACAAAACAGAGAAGCTGAGAGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp GCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGCACCTGCCCCTCTaGGCTGGGGTAGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: AEPLFIGGFRFSVPTQLLQHLPL*AGVGRG
Trigger: TCCTCTGCCTACCCCAGCCAAGAGGGGCAGGTGCTG...GAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp TTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCCTTGATGCCAAGGAGTaGATACTGGCCATAGATGCC +
Preference number: 5 (lower is better)
Translates to: FRFSVPTQLLQYHQPPPPLDAKE*ILAIDA
Trigger: GGCATCTATGGCCAGTATCAACTCCTTGGCATCAAG...GGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp CCACAGATTTTCAGTCTCAGGCATCCTTGTGTGGTTGCCATGGCCACCAGGTGTCAGGGAGGGATCCATTaGGAAGTTCGCATCTGGTGT +
Preference number: 5 (lower is better)
Translates to: PQIFSLRHPCVVAMATRCQGGIH*EVRIWC
Trigger: ACACCAGATGCGAACTTCCAAATGGATCCCTCCCTG...ACACCTGGTGGCCATGGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp AATGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGGTGGTGCTGAAATACTaGCCTCCTCCAGGGCCATAC +
Preference number: 5 (lower is better)
Translates to: NGPGLLPLTLLRLIFSQWVVLKY*PPPGPY
Trigger: GTATGGCCCTGGAGGAGGCAAGTATTTCAGCACCAC...CCACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CAA 90 bp TTCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTCAGCACCTGCCCCTCTaGGCTGGGGTAGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: FCRTFIYWWIQIQRPDSVQHLPL*AGVGRG
Trigger: TCCTCTGCCTACCCCAGCCAAGAGGGGCAGGTGCTG...AACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp CAAAAGTGGCCACGGGTGCTTACCCCCTGCCCTGAGTTCCTGAAACTGTGGGATTACCTCCTGTCTTCTTaGACAGTAATCGGACAGACT +
Preference number: 5 (lower is better)
Translates to: QKWPRVLTPCPEFLKLWDYLLSS*TVIGQT
Trigger: AGTCTGTCCGATTACTGTCAAAGAAGACAGGAGGTA...ATCCCACAGTTTCAGGAACTCAGGGCAGGGGGTAAGCACCCGTGGCCACTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS GCA 90 bp AAAGCTTGGAAGGCGACAAAGACTTTTGTGATGTATTCGCCTGGCTaGAGGGTGACTTCCTGGGTATTCCCACCTAAGGCTCCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: KAWKATKTFVMYSPG*RVTSWVFPPKAPSF
Trigger: GAAACTGGGAGCCTTAGGTGGGAATACCCAGGAAGTCACCCTGCAGCCAGGCGAATACATCACAAAAGTCTTTGTCGCCTTCCAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000573019.1
ENST00000634483.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp TTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCTTGATGCCAAGGAGTaGATACTGGCCATAGATGCC +
Preference number: 5 (lower is better)
Translates to: LVDSDSASRLSYSSTISHLDAKE*ILAIDA
Trigger: GGCATCTATGGCCAGTATCAACTCCTTGGCATCAAG...GTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp GGAGAGCATGGTGCCTGCCCCGGACATTGTCTGCGGGACACCTTCATCGTTAGGTCTCACAACTTTCTCTaGCTAATCACTTTCATGCAT +
Preference number: 5 (lower is better)
Translates to: GEHGACPGHCLRDTFIVRSHNFL*LITFMH
Trigger: ATGCATGAAAGTGATTAGCAAGAGAAAGTTGTGAGA...CCTAACGATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCACCATGCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp TTAGGGTCACAGCGTCCAGGCTTGCTCAGGACGGTCTTGGGCGATGTCTGTCCCTCTCACAACTTTCTCTaGCTAATCACTTTCATGCAT +
Preference number: 5 (lower is better)
Translates to: LGSQRPGLLRTVLGDVCPSHNFL*LITFMH
Trigger: ATGCATGAAAGTGATTAGCAAGAGAAAGTTGTGAGA...GGGACAGACATCGCCCAAGACCGTCCTGAGCAAGCCTGGACGCTGTGACCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp TATTGTTCTTTACAAAAACATCTGGCTGTGGTAGGTTGGGAGAGCATGGTGCCTTGCCTGCCCCGGACATaGTCTGCGGGACACCTTCAT +
Preference number: 5 (lower is better)
Translates to: YCSLQKHLAVVGWESMVPCLPRT*SAGHLH
Trigger: ATGAAGGTGTCCCGCAGACAATGTCCGGGGCAGGCA...AGGCACCATGCTCTCCCAACCTACCACAGCCAGATGTTTTTGTAAAGAACAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS TCA 90 bp TGGTCGGCTCCTCTAGTGGATAATTCCATTCAAAGCCAATGCTCTTaGTGCCAAGGAGTTGATACTGGCCATAGATGCCCACCAGCACCT +
Preference number: 5 (lower is better)
Translates to: WSAPLVDNSIQSQCS*CQGVDTGHRCPPAP
Trigger: AGGTGCTGGTGGGCATCTATGGCCAGTATCAACTCCTTGGCATCAAGAGCATTGGCTTTGAATGGAATTATCCACTAGAGGAGCCGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp CCACAGATTTTCAGTCTCAGGCATCCTTGTGTGGTTGCCATGGCCACCAGGTGTCTTTCATGCATCAGTTaGCGAATGGATTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PQIFSLRHPCVVAMATRCLSCIS*RMDSPA
Trigger: AGCTGGAGAATCCATTCGCAAACTGATGCATGAAAG...ACACCTGGTGGCCATGGCAACCACACAAGGATGCCTGAGACTGAAAATCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp CTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGGTCCACTCTGACCCTTACAGAGGGGCCATTTTaGGTTGAGTTGAGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: LPLTLLRLIFSQWSTLTLTEGPF*VELSLG
Trigger: ACCCAAGCTCAACTCAACCAAAAATGGCCCCTCTGT...AAGGGTCAGAGTGGACCACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CAA 90 bp ATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGTGGTGCTGAAATACTaGCCTCCTCCAGGGCCATAC +
Preference number: 5 (lower is better)
Translates to: IYWWIQIQRPDSVTPVPSVVLKY*PPPGPY
Trigger: GTATGGCCCTGGAGGAGGCAAGTATTTCAGCACCAC...TGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp AGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCAGACAGAACCTTTATTTATaGGTGGATTCAGATTCAGCG +
Preference number: 5 (lower is better)
Translates to: RFSVPTQLLQYHQPPPPRQNLYL*VDSDSA
Trigger: CGCTGAATCTGAATCCACCAATAAATAAAGGTTCTG...TCTGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp TCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCAGCCACCACCACCCACAGAACCTTTATTTATaGGTGGATTCAGATTCAGCG +
Preference number: 5 (lower is better)
Translates to: SDSASRLSYSSTISHHHPQNLYL*VDSDSA
Trigger: CGCTGAATCTGAATCCACCAATAAATAAAGGTTCTG...TGGGTGGTGGTGGCTGATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp GCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCTTGATGCCAAGGAGTaGATACTGGCCATAGATGCC +
Preference number: 5 (lower is better)
Translates to: AEPLFIGGFRFSVPTQLLLDAKE*ILAIDA
Trigger: GGCATCTATGGCCAGTATCAACTCCTTGGCATCAAG...GAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp TATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCAGTACCATCCTTGATGCCAAGGAGTaGATACTGGCCATAGATGCC +
Preference number: 5 (lower is better)
Translates to: YLLVDSDSASRLSYSSTILDAKE*ILAIDA
Trigger: GGCATCTATGGCCAGTATCAACTCCTTGGCATCAAG...GATGGTACTGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp AGGTTGTTTTGCTGCCCTAGAAGACTGGATGCTCTAGAATCATCTCTCCTTTTGGAATCATCTCTCCTTTaGCTGTGGGCCCACCTTCAT +
Preference number: 5 (lower is better)
Translates to: RLFCCPRRLDALESSLLLESSLL*LWAHLH
Trigger: ATGAAGGTGGGCCCACAGCAAAAGGAGAGATGATTC...CAAAAGGAGAGATGATTCTAGAGCATCCAGTCTTCTAGGGCAGCAAAACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp AAATGGCCCTGGACTTCTGCCTCTAACACTTCTGCGACTCATATTCAGTCAGTGTACCTCCTGTCTTCTTaGACAGTAATCGGACAGACT +
Preference number: 5 (lower is better)
Translates to: KWPWTSASNTSATHIQSVYLLSS*TVIGQT
Trigger: AGTCTGTCCGATTACTGTCAAAGAAGACAGGAGGTA...CACTGACTGAATATGAGTCGCAGAAGTGTTAGAGGCAGAAGTCCAGGGCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571723.1
ENST00000634234.1
CDS-3UTR CAA 90 bp CTGGCCTCTCAGCTTCTCTGTTTTGTCTCACAACTTTCTCTTGCTAATCACTTTCTTTCATGCATCAGTTaGCGAATGGATTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LASQLLCFVSQLSLANHFLSCIS*RMDSPA
Trigger: AGCTGGAGAATCCATTCGCAAACTGATGCATGAAAG...AAAGTGATTAGCAAGAGAAAGTTGTGAGACAAAACAGAGAAGCTGAGAGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS-3UTR CAA 90 bp AGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTACTCCACAGAACCTTTATTTATaGGTGGATTCAGATTCAGCG +
Preference number: 5 (lower is better)
Translates to: RTFIYWWIQIQRPDSVTPQNLYL*VDSDSA
Trigger: CGCTGAATCTGAATCCACCAATAAATAAAGGTTCTG...TGGAGTAACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp TTCTGCAGAACCTTTATTTATTGGTGGATTCAGATTCAGCGTCCCGACTCAGTTCAGAACCTTTATTTATaGGTGGATTCAGATTCAGCG +
Preference number: 5 (lower is better)
Translates to: FCRTFIYWWIQIQRPDSVQNLYL*VDSDSA
Trigger: CGCTGAATCTGAATCCACCAATAAATAAAGGTTCTG...AACTGAGTCGGGACGCTGAATCTGAATCCACCAATAAATAAAGGTTCTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000634500.1
ENST00000634906.1
CDS-3UTR CAA 90 bp CTGGCCTCTCAGCTTCTCTGTTTTGTCTCACAACTTTCTCTTGCTAATCACTTTCTTAGAAAATTTAGGTaGTTTTGCTGCCCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: LASQLLCFVSQLSLANHFLRKFR*FCCPRR
Trigger: TCTTCTAGGGCAGCAAAACAACCTAAATTTTCTAAG...AAAGTGATTAGCAAGAGAAAGTTGTGAGACAAAACAGAGAAGCTGAGAGGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570670.5
ENST00000635502.1
CDS CCA 72 bp CAGGAGGGCAAGCGTGAGCAGCAGCAGCATGGCCTCTaGCCGGTGCATCCCAGGGCTCTCGCCTGTGACTGG +
Preference number: 6 (lower is better)
Translates to: QEGKREQQQHGL*PVHPRALACDW
Trigger: CCAGTCACAGGCGAGAGCCCTGGGATGCACCGGCCAGAGGCCATGCTGCTGCTGCTCACGCTTGCCCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000382280.7
ENST00000570670.5
ENST00000571723.1
ENST00000573019.1
ENST00000576423.1
ENST00000634234.1
ENST00000634483.1
ENST00000634500.1
ENST00000635116.1
ENST00000635502.1
CDS CCA 72 bp CAGGAGGGCAAGCGTGAGCAGCAGCAGCATGGCCTCTaGCCGGTGCATCCCAGGGCTCTGTGGGAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: QEGKREQQQHGL*PVHPRALWEEE
Trigger: CTCTTCTTCCCACAGAGCCCTGGGATGCACCGGCCAGAGGCCATGCTGCTGCTGCTCACGCTTGCCCTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572863.1
ENST00000634906.1
CDS CCA 72 bp CAGCATGGCCTCTGGCCGGTGCATCCCAGGGCTCTGTaGGAAGAAGAGAGGCCTCCTGACTCCAAAGCAAGG +
Preference number: 6 (lower is better)
Translates to: QHGLWPVHPRAL*EEERPPDSKAR
Trigger: CCTTGCTTTGGAGTCAGGAGGCCTCTCTTCTTCCCACAGAGCCCTGGGATGCACCGGCCAGAGGCCATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572863.1
ENST00000634906.1
CDS CCA 72 bp GTTCCTGAAACTGTGGGATGGGAGGGGACATGGCGCTaGGCCCATGACCATAGCCCTACTCACCTTTTCACC +
Preference number: 6 (lower is better)
Translates to: VPETVGWEGTWR*AHDHSPTHLFT
Trigger: GGTGAAAAGGTGAGTAGGGCTATGGTCATGGGCCCAGCGCCATGTCCCCTCCCATCCCACAGTTTCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571723.1
ENST00000576423.1
ENST00000634234.1
ENST00000635116.1
CDS GCA 72 bp AAGGCGACAAAGACTTTTGTGATGTATTCGCCTGGCTaGAGGGTGACTTCCTGGGTATTCCCACCTAAGGCT +
Preference number: 6 (lower is better)
Translates to: KATKTFVMYSPG*RVTSWVFPPKA
Trigger: AGCCTTAGGTGGGAATACCCAGGAAGTCACCCTGCAGCCAGGCGAATACATCACAAAAGTCTTTGTCGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000573019.1
ENST00000634483.1
ENST00000634500.1
ENST00000634906.1
CDS TCA 72 bp TCCCAAAATAGAAATAGCGGTCCTTGCTGGTGTACATaGCCATACCCCGGAGGAAAGCTTGGAAGGCGACAA +
Preference number: 6 (lower is better)
Translates to: SQNRNSGPCWCT*PYPGGKLGRRQ
Trigger: TTGTCGCCTTCCAAGCTTTCCTCCGGGGTATGGTCATGTACACCAGCAAGGACCGCTATTTCTATTTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000573019.1
ENST00000634483.1
ENST00000634500.1
ENST00000634906.1
CDS CCA 72 bp TTGCTGGTGTACATGACCATACCCCGGAGGAAAGCTTaGAAGGCGACAAAGACTTTTGTGATGTATTCGCCT +
Preference number: 6 (lower is better)
Translates to: LLVYMTIPRRKA*KATKTFVMYSP
Trigger: AGGCGAATACATCACAAAAGTCTTTGTCGCCTTCCAAGCTTTCCTCCGGGGTATGGTCATGTACACCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382280.7
ENST00000572863.1
ENST00000573019.1
ENST00000634483.1
ENST00000634500.1
ENST00000634906.1