RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFYVE19 (Homo sapiens)

Ensembl gene IDs: ENSG00000166140

Ensembl transcript IDs: ENST00000299173.14, ENST00000336455.9, ENST00000355341.8, ENST00000560078.1, ENST00000561617.1, ENST00000561768.5, ENST00000563497.1, ENST00000563530.1, ENST00000564258.5, ENST00000566407.5, ENST00000566767.1, ENST00000567756.5, ENST00000568062.5, ENST00000569057.5, ENST00000570108.5, ENST00000570162.1

Found 913 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTCACTCTCTCGGGGTCCTGTCCCCGCAGCATGGCTAGTCGCTTaGCCAGGGCCAGAATCCGTTCCTGCCTCGTGTTCTCCTCCCGCA +
Preference number: 1 (lower is better)
Translates to: GSLSRGPVPAAWLVA*PGPESVPASCSPPA
Trigger: TGCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGGACCCCGAGAGAGTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR GCA 90 bp CCCCGCAGCATGGCTAGTCGCTTGGCCAGGGCCAGAATCCGTTCCTaGCTCGTGTTCTCCTCCCGCAACTCAAGTGCTGCCTCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: PRSMASRLARARIRS*LVFSSRNSSAASAS
Trigger: GCTGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCTGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR CCA 90 bp TCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTaGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGG +
Preference number: 1 (lower is better)
Translates to: SSVEPDKLSHRTSCG*AQKWVPLPVGLPFR
Trigger: CCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
3UTR CCA 90 bp GATAGTCCTGGAGGGTCACTCTCTCGGGGTCCTGTCCCCGCAGCATaGCTAGTCGCTTGGCCAGGGCCAGAATCCGTTCCTGCCTCGTGT +
Preference number: 1 (lower is better)
Translates to: DSPGGSLSRGPVPAA*LVAWPGPESVPASC
Trigger: ACACGAGGCAGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGGACCCCGAGAGAGTGACCCTCCAGGACTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR GCA 90 bp AGGCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTaGAGGGATGTTAAAGCCACTTGCCTCATCCAGGGAAGCTTCTTC +
Preference number: 1 (lower is better)
Translates to: RLCPAGLRPGSRSLL*RDVKATCLIQGSFF
Trigger: GAAGAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR CCA 90 bp TCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTT +
Preference number: 1 (lower is better)
Translates to: SIISRARQALPSDVL*LGPEMGAAACGTAL
Trigger: AAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
3UTR GCA 90 bp GGCCAGAATCCGTTCCTGCCTCGTGTTCTCCTCCCGCAACTCAAGTaGTGCCTCAGCCAGCAGTCTGCTCTTCTCCTCCTCCAAGGACCA +
Preference number: 1 (lower is better)
Translates to: GQNPFLPRVLLPQLK*CLSQQSALLLLQGP
Trigger: TGGTCCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR CCA 90 bp CTCCTCCAAGGACCAGTTGGCCTGCCTCTTGGAATTAGTGCTCCCTaGGCCACCCTGGTTGAGATCATTCTGGAGAGAGGCAGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: LLQGPVGLPLGISAP*ATLVEIILERGSWA
Trigger: GGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR TCA 90 bp GCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTaGCGTTCATCCTTTAGGGCAGCCAGCCGTGCCTCTATCTCTGCC +
Preference number: 1 (lower is better)
Translates to: AASRASISWVEGMEP*RSSFRAASRASISA
Trigger: GGCAGAGATAGAGGCACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR GCA 90 bp GACTGCCCTTCCGGGAGGACCAGGGTGTCTTCAGTGCTCTTGGCCTaGACGTGGAGGAGAGTAGGCAGATGTCTGGTGCTCTTTAAGCTC +
Preference number: 1 (lower is better)
Translates to: DCPSGRTRVSSVLLA*TWRRVGRCLVLFKL
Trigger: GAGCTTAAAGAGCACCAGACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACACCCTGGTCCTCCCGGAAGGGCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR CCA 90 bp CGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGCTTTTGCTTGGCTTCCAAGGCTGCC +
Preference number: 1 (lower is better)
Translates to: RARRSAIIWSCRVSP*LWEVLGFCLASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR CCA 90 bp GGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCTGGGCTTT +
Preference number: 1 (lower is better)
Translates to: GLFSWRSRARRSAII*SCRVSPWLWEVLGF
Trigger: AAAGCCCAGCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR CCA 90 bp CCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGCCTCTA +
Preference number: 1 (lower is better)
Translates to: PATLQVVPPFPGWKG*NPDVHPLGQPAVPL
Trigger: TAGAGGCACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR CCA 90 bp GAACTCTGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCC +
Preference number: 1 (lower is better)
Translates to: ELCPATLQVVPPFPG*KGWNPDVHPLGQPA
Trigger: GGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR CCA 90 bp GACCAGTTGGCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCCTaGTTGAGATCATTCTGGAGAGAGGCAGCTGGGCCTCCTCCTTTC +
Preference number: 1 (lower is better)
Translates to: DQLACLLELVLPGPP*LRSFWREAAGPPPF
Trigger: GAAAGGAGGAGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR CCA 90 bp GACTCTTTGGATGGCTGTCTCCTCATCCTCGTCGTCATCACTGTCTaGGAGGCGATAGTCCTGGAGGGTCACTCTCTCGGGGTCCTGTCC +
Preference number: 1 (lower is better)
Translates to: DSLDGCLLILVVITV*EAIVLEGHSLGVLS
Trigger: GGACAGGACCCCGAGAGAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGATGACGACGAGGATGAGGAGACAGCCATCCAAAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR GCA 90 bp TCAGCCAGCAGTCTGCTCTTCTCCTCCTCCAAGGACCAGTTGGCCTaGCTCTTGGAATTAGTGCTCCCTGGGCCACCCTGGTTGAGATCA +
Preference number: 1 (lower is better)
Translates to: SASSLLFSSSKDQLA*LLELVLPGPPWLRS
Trigger: TGATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR GCA 90 bp CAGAATCCGTTCCTGCCTCGTGTTCTCCTCCCGCAACTCAAGTGCTaGCTCAGCCAGCAGTCTGCTCTTCTCCTCCTCCAAGGACCAGTT +
Preference number: 1 (lower is better)
Translates to: QNPFLPRVLLPQLKC*LSQQSALLLLQGPV
Trigger: AACTGGTCCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAGGAACGGATTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR CCA 90 bp ACTGAGACTGAATGGCAGGCAGGTTGGGACAGGAGCCCTAGGAGCTaGGGTCCTTTGCCAGTAAGGCAGGAAGCAGGGTGTGTGTGCATT +
Preference number: 1 (lower is better)
Translates to: TETEWQAGWDRSPRS*GPLPVRQEAGCVCI
Trigger: AATGCACACACACCCTGCTTCCTGCCTTACTGGCAAAGGACCCCAGCTCCTAGGGCTCCTGTCCCAACCTGCCTGCCATTCAGTCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR CCA 90 bp GGTCCGGTTAGGGCGCATTACTGGAAGAGAGATACTGAGACTGAATaGCAGGCAGGTTGGGACAGGAGCCCTAGGAGCTGGGGTCCTTTG +
Preference number: 1 (lower is better)
Translates to: GPVRAHYWKRDTETE*QAGWDRSPRSWGPL
Trigger: CAAAGGACCCCAGCTCCTAGGGCTCCTGTCCCAACCTGCCTGCCATTCAGTCTCAGTATCTCTCTTCCAGTAATGCGCCCTAACCGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR CCA 90 bp CCTTCCGGGAGGACCAGGGTGTCTTCAGTGCTCTTGGCCTGCACGTaGAGGAGAGTAGGCAGATGTCTGGTGCTCTTTAAGCTCAAAGGC +
Preference number: 1 (lower is better)
Translates to: PSGRTRVSSVLLACT*RRVGRCLVLFKLKG
Trigger: GCCTTTGAGCTTAAAGAGCACCAGACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACACCCTGGTCCTCCCGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR GCA 90 bp AGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCAC +
Preference number: 1 (lower is better)
Translates to: RHWQKTLWSGPHGIA*RLSVGCSQSEALLH
Trigger: GTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR CCA 90 bp AAGGGTACATGCCGAGAGGTCAGGGGTCCGGTTAGGGCGCATTACTaGAAGAGAGATACTGAGACTGAATGGCAGGCAGGTTGGGACAGG +
Preference number: 1 (lower is better)
Translates to: KGTCREVRGPVRAHY*KRDTETEWQAGWDR
Trigger: CCTGTCCCAACCTGCCTGCCATTCAGTCTCAGTATCTCTCTTCCAGTAATGCGCCCTAACCGGACCCCTGACCTCTCGGCATGTACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR CCA 90 bp GACCCTCTGGTCAGGACCTCATGGCATTGCTTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGCACTGCTGCACTGAAGCTTAGGCAG +
Preference number: 1 (lower is better)
Translates to: DPLVRTSWHCLQTFC*VFPVRGTAALKLRQ
Trigger: CTGCCTAAGCTTCAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR GCA 90 bp TCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTaGCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGG +
Preference number: 1 (lower is better)
Translates to: STYFIRPTKCQGRGL*PRARLQGSPVDSVW
Trigger: CCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
3UTR GCA 90 bp GGAAGAGAAACAGCAGAGGCAATGCAGAGGCATGTAAAGGGTACATaGCGAGAGGTCAGGGGTCCGGTTAGGGCGCATTACTGGAAGAGA +
Preference number: 1 (lower is better)
Translates to: GRETAEAMQRHVKGT*REVRGPVRAHYWKR
Trigger: TCTCTTCCAGTAATGCGCCCTAACCGGACCCCTGACCTCTCGGCATGTACCCTTTACATGCCTCTGCATTGCCTCTGCTGTTTCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR CCA 90 bp CCAAGGCTGCCACACGCTTCTTATAGTTCTGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATT +
Preference number: 1 (lower is better)
Translates to: PRLPHASYSSEVVTT*RHWQKTLWSGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTCAGAACTATAAGAAGCGTGTGGCAGCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR GCA 90 bp TCCTTTGCCAGTAAGGCAGGAAGCAGGGTGTGTGTGCATTGTTCCTaGGTGCATTGTGTGAGTAGTAGAGAGGCTGAGAAATCCAAGATG +
Preference number: 1 (lower is better)
Translates to: SFASKAGSRVCVHCS*VHCVSSREAEKSKM
Trigger: CATCTTGGATTTCTCAGCCTCTCTACTACTCACACAATGCACGCAGGAACAATGCACACACACCCTGCTTCCTGCCTTACTGGCAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR-3UTR CCA 90 bp GGCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGCCTGTCCCCGCAGCATaGCTAGTCGCTTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: GSAPRGCVQGREACSAGMPVPAA*LVAWPG
Trigger: CCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGG...CATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp GGCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTGTGTCTGCTGGGCTTaGGTCCTGGTGTCCGGTGTG +
Preference number: 2 (lower is better)
Translates to: GSAPRGCVQGREACSAGMCVCWA*VLVSGV
Trigger: CACACCGGACACCAGGACCCAAGCCCAGCAGACACA...CATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR CAA 90 bp AGGGTCACTCTCTCGGGGTCCTGTCCCCGCAGCATGGCTAGTCGCTaGGCCAGGGCCAGAATCCGTTCCTGCCTCGTGTTCTCCTCCCGC +
Preference number: 2 (lower is better)
Translates to: RVTLSGSCPRSMASR*ARARIRSCLVFSSR
Trigger: GCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGGACCCCGAGAGAGTGACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp GGCCTGTGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTGGGTGCCGCTGCCTGTaGGACTGCCCTTCCGGGAGG +
Preference number: 2 (lower is better)
Translates to: GLCPRARLQGSPVDSVWSGCRCL*DCPSGR
Trigger: CCTCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCC...AGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR GCA 90 bp CCCCGCAGCATGGCTAGTCGCTTGGCCAGGGCCAGAATCCGTTCCTGCCTCGTGCTCCCGCAACTCAAGTaGTGCCTCAGCCAGCAGTCT +
Preference number: 2 (lower is better)
Translates to: PRSMASRLARARIRSCLVLPQLK*CLSQQS
Trigger: AGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAG...CACGAGGCAGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCTGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCGGGTGCCGCTGCCTGTaGGACTGCCCTTCCGGGAGG +
Preference number: 2 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVGCRCL*DCPSGR
Trigger: CCTCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCC...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR CCA 90 bp TCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACGGGTGCCGCTGCCTGTaGGACTGCCCTTCCGGGAGG +
Preference number: 2 (lower is better)
Translates to: SRDTKAQEGAYPSSVEPDGCRCL*DCPSGR
Trigger: CCTCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCC...GTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR GCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCCGCTGCCTGTGGGACTaGCCTTCCGGGAGGACCAGG +
Preference number: 2 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGRCLWD*PSGRTR
Trigger: CCTGGTCCTCCCGGAAGGGCAGTCCCACAGGCAGCG...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
3UTR-3UTR GCA 90 bp GGCCTGTGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTGGGCCCAGAAATGGGTaGCGCTGCCTGTGGGACTGC +
Preference number: 2 (lower is better)
Translates to: GLCPRARLQGSPVDSVWSGPRNG*RCLWDC
Trigger: GCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCC...AGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR GCA 90 bp TCCTGGAGGGTCACTCTCTCGGGGTCCTGTCCCCGCAGCATGGCTAGTCGCTTGCCGCAACTCAAGTGCTaGCTCAGCCAGCAGTCTGCT +
Preference number: 2 (lower is better)
Translates to: SWRVTLSGSCPRSMASRLPQLKC*LSQQSA
Trigger: AGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGG...CAAGCGACTAGCCATGCTGCGGGGACAGGACCCCGAGAGAGTGACCCTCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp TGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTTAAATGTGTCTGCTGGGCTTaGGTCCTGGTGTCCGGTGTG +
Preference number: 2 (lower is better)
Translates to: CPAGLRPGSRSLLCRDVKCVCWA*VLVSGV
Trigger: CACACCGGACACCAGGACCCAAGCCCAGCAGACACA...TTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp CTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCCGCTGCCTGTGGGACTaGCCTTCCGGGAGGACCAGG +
Preference number: 2 (lower is better)
Translates to: LEWRIFPHSRDTKAQEGARCLWD*PSGRTR
Trigger: CCTGGTCCTCCCGGAAGGGCAGTCCCACAGGCAGCG...GGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR GCA 90 bp GTCATCACTGTCTGGGAGGCGATAGTCCTGGAGGGTCACTCTCTCGGGGTCCTGGCCAGAATCCGTTCCTaGCTCGTGTTCTCCTCCCGC +
Preference number: 2 (lower is better)
Translates to: VITVWEAIVLEGHSLGVLARIRS*LVFSSR
Trigger: GCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGC...CAGGACCCCGAGAGAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp CGTCATCACTGTCTGGGAGGCGATAGTCCTGGAGGGTCACTCTCTCGGGGTCCTGCCAGAATCCGTTCCTaGCTCGTGTTCTCCTCCCGC +
Preference number: 2 (lower is better)
Translates to: RHHCLGGDSPGGSLSRGPARIRS*LVFSSR
Trigger: GCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGC...AGGACCCCGAGAGAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp GTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCCGGACGTCCTGTGGCTaGGCCCAGAAATGGGTGCCG +
Preference number: 2 (lower is better)
Translates to: VQGREACSAGMLKPLASSRTSCG*AQKWVP
Trigger: CGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCG...GGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR CCA 90 bp TGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTTAAAGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: CPAGLRPGSRSLLCRDVKVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...TTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp GCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: ACEGTNLGLFSWRSRARRVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp CTCCTCCAAGGACCAGTTGGCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCTGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: LLQGPVGLPLGISAPWATCRVSP*LWEVLG
Trigger: GCCCAGCACTTCCCAGAGCCAGGGACTGACACGACA...GGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp CTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGC +
Preference number: 2 (lower is better)
Translates to: LPVRGLTWACSPGGVVLGLGLFS*RSRARR
Trigger: GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAA...GCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR CAA 90 bp GAATGGCAGGCAGGTTGGGACAGGAGCCCTAGGAGCTGGGGTCCTTaGCCAGTAAGGCAGGAAGCAGGGTGTGTGTGCATTGTTCCTGCG +
Preference number: 2 (lower is better)
Translates to: EWQAGWDRSPRSWGP*PVRQEAGCVCIVPA
Trigger: CGCAGGAACAATGCACACACACCCTGCTTCCTGCCTTACTGGCAAAGGACCCCAGCTCCTAGGGCTCCTGTCCCAACCTGCCTGCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR-3UTR GCA 90 bp GGTGGTGACCACTTGGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGAGAAATGGGTGCCGCTaGCTGTGGGACTGCCCTTCC +
Preference number: 2 (lower is better)
Translates to: GGDHLEALAEDPLVRTSWRNGCR*LWDCPS
Trigger: GGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCT...CCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR GCA 90 bp CTCCCTGGGCCACCCTGGTTGAGATCATTCTGGAGAGAGGCAGCTGGGCCTCCTGAAGTGCTGGGCTTTTaGTTGGCTTCCAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LPGPPWLRSFWREAAGPPEVLGF*LASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTC...AGGAGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp GCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCCCTGGCTCTGGGAAGTaGTGGGCTTTTGCTTGGCTT +
Preference number: 2 (lower is better)
Translates to: ACEGTNLGLFSWRSRARRPGSGK*WAFAWL
Trigger: AAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGG...GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp CTCCAAGGACCAGTTGGCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCCTGAGCAGATCCTGTGTCTaGTGGGCTTGGGTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LQGPVGLPLGISAPWATLSRSCV*WAWVLV
Trigger: CACCAGGACCCAAGCCCAGCAGACACAGGATCTGCT...CAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCAGGCTGGGCCCAGAAATaGGTGCCGCTGCCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: HTLLDPLSARGGACALEPGWAQK*VPLPVG
Trigger: TCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCC...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
3UTR-3UTR CCA 90 bp GGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGCCTGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: GWKGWNPDVHPLGQPAVPVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...AGGCACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp CTGCCTCGTGTTCTCCTCCCGCAACTCAAGTGCTGCCTCAGCCAGCAGTCTGCTCGTGCCTCCATTTCCTaGGTGGAAGGGATGGAACCC +
Preference number: 2 (lower is better)
Translates to: LPRVLLPQLKCCLSQQSARASIS*VEGMEP
Trigger: GGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACG...AGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp GAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCGCTGCCTGTGGGACTaGCCTTCCGGGAGGACCAGG +
Preference number: 2 (lower is better)
Translates to: ESFLIPGTPRLRKGPIHHRCLWD*PSGRTR
Trigger: CCTGGTCCTCCCGGAAGGGCAGTCCCACAGGCAGCG...ATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR GCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCAGAAATGGGTGCCGCTaGCTGTGGGACTGCCCTTCC +
Preference number: 2 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVRNGCR*LWDCPS
Trigger: GGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCT...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR GCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTAGAAATGGGTGCCGCTaGCTGTGGGACTGCCCTTCC +
Preference number: 2 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCRNGCR*LWDCPS
Trigger: GGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCT...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
3UTR-3UTR GCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGGGGCCCAGAAATGGGTaGCGCTGCCTGTGGGACTGC +
Preference number: 2 (lower is better)
Translates to: QHTLLDPLSARGGACALEGPRNG*RCLWDC
Trigger: GCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCC...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
3UTR-3UTR GCA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCAGGGGAGGGGCCTGTaGCCTAGAGCCAGGTTACAG +
Preference number: 2 (lower is better)
Translates to: LPVWASNRRAPTSSLPVIQGRGL*PRARLQ
Trigger: CTGTAACCTGGCTCTAGGGCACAGGCCCCTCCCCTG...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
3UTR-3UTR GCA 90 bp GGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGCCTCAACGCTGCAAGTCGTaGCTCCATTTCCTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: GWKGWNPDVHPLGQPAVPQRCKS*LHFLGG
Trigger: TCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTG...AGGCACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp GTCATCACTGTCTGGGAGGCGATAGTCCTGGAGGGTCACTCTCTCGGGGTCCTGACCTCAGCTGCCAGCTaGGTTAGCAGATCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: VITVWEAIVLEGHSLGVLTSAAS*VSRSCV
Trigger: GACACAGGATCTGCTAACGCAGCTGGCAGCTGAGGT...CAGGACCCCGAGAGAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp CTTCCGGGAGGACCAGGGTGTCTTCAGTGCTCTTGGCCTGCACGTGGAGGAGAGCAGGGTCGAGAAGCCTaGTCTGCAGGGATGTTAAAG +
Preference number: 2 (lower is better)
Translates to: LPGGPGCLQCSWPARGGEQGREA*SAGMLK
Trigger: CTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTG...CTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACACCCTGGTCCTCCCGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR CCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTGGGTGCCGCTGCCTGTaGGACTGCCCTTCCGGGAGG +
Preference number: 2 (lower is better)
Translates to: APTSSLPVILSNGESFLIGCRCL*DCPSGR
Trigger: CCTCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCC...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR CCA 90 bp TCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGCGGACGTCCTGTGGCTaGGCCCAGAAATGGGTGCCG +
Preference number: 2 (lower is better)
Translates to: SFLIPGTPRLRKGPIHHQRTSCG*AQKWVP
Trigger: CGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCG...CTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR CCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCCCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGT +
Preference number: 2 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVPSDVL*LGPEMG
Trigger: ACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGG...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR CCA 90 bp GTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGCCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGT +
Preference number: 2 (lower is better)
Translates to: VWASNRRAPTSSLPVILSPSDVL*LGPEMG
Trigger: ACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGG...CGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR CCA 90 bp GCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCCCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGT +
Preference number: 2 (lower is better)
Translates to: ACSPGGVVLGAQQSSGLVPSDVL*LGPEMG
Trigger: ACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGG...GACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR CCA 90 bp TTTCCTGGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCTGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: FPGWKGWNPDVHPLGQPACRVSP*LWEVLG
Trigger: GCCCAGCACTTCCCAGAGCCAGGGACTGACACGACA...GGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp TGGGCCACCCTGGTTGAGATCATTCTGGAGAGAGGCAGCTGGGCCTCCTCCTTTCGTGCCTCCATTTCCTaGGTGGAAGGGATGGAACCC +
Preference number: 2 (lower is better)
Translates to: WATLVEIILERGSWASSFRASIS*VEGMEP
Trigger: GGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACG...AAAGGAGGAGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR TCA 90 bp GTCTTCAGTGCTCTTGGCCTGCACGTGGAGGAGAGTAGGCAGATGTCTGGTGCTGAGGCACTGCTGCACTaGAGCTTAGGCAGCCTGAAC +
Preference number: 2 (lower is better)
Translates to: VFSALGLHVEESRQMSGAEALLH*SLGSLN
Trigger: GTTCAGGCTGCCTAAGCTTCAGTGCAGCAGTGCCTC...AGCACCAGACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR GCA 90 bp TTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCCGCTGCCTGTGGGACTaGCCTTCCGGGAGGACCAGG +
Preference number: 2 (lower is better)
Translates to: FPPSHSLEWRIFPHSRDTRCLWD*PSGRTR
Trigger: CCTGGTCCTCCCGGAAGGGCAGTCCCACAGGCAGCG...GGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR GCA 90 bp GAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATGGGCCCAGAAATGGGTaGCGCTGCCTGTGGGACTGC +
Preference number: 2 (lower is better)
Translates to: ESFLIPGTPRLRKGPIHHGPRNG*RCLWDC
Trigger: GCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCC...ATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR GCA 90 bp AGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAACCTGGCTCTGGGAAGTaGTGGGCTTTTGCTTGGCTT +
Preference number: 2 (lower is better)
Translates to: RGLTWACSPGGVVLGAQQPGSGK*WAFAWL
Trigger: AAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGG...TTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp TGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGCCTCTAGGTAGAACTCTGCCCTaGAACGCTGCAAGTCGTGCC +
Preference number: 2 (lower is better)
Translates to: WKGWNPDVHPLGQPAVPLGRTLP*NAASRA
Trigger: GGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC...TAGAGGCACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp CTCCAAGGACCAGTTGGCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCCTGCGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCC +
Preference number: 2 (lower is better)
Translates to: LQGPVGLPLGISAPWATLRSAII*SCRVSP
Trigger: GGGACTGACACGACAAGACCAGATGATTGCTGAGCG...CAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp TTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGC +
Preference number: 2 (lower is better)
Translates to: LFSWRSRARRSAIIWSCRLGLFS*RSRARR
Trigger: GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAA...ACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp GAGCTGCTGCAGGACTCTTTGGATGGCTGTCTCCTCATCCTCGTCGTCATCACTTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGC +
Preference number: 2 (lower is better)
Translates to: ELLQDSLDGCLLILVVITLGLFS*RSRARR
Trigger: GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAA...AGTGATGACGACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp GCAGCCAGCCGTGCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCCCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGAC +
Preference number: 2 (lower is better)
Translates to: AASRASISACEGTNLGLFPPFPG*KGWNPD
Trigger: GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG...GAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACGGCTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp ATCCGTTCCTGCCTCGTGTTCTCCTCCCGCAACTCAAGTGCTGCCTCAGCCAGCTGGCAGAAGACCCTCTaGTCAGGACCTCATGGCATT +
Preference number: 2 (lower is better)
Translates to: IRSCLVFSSRNSSAASASWQKTL*SGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCA...GCTGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAGGAACGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR CCA 90 bp CGTCATCACTGTCTGGGAGGCGATAGTCCTGGAGGGTCACTCTCTCGGGGTCCTACCACTTGGAGGCATTaGCAGAAGACCCTCTGGTCA +
Preference number: 2 (lower is better)
Translates to: RHHCLGGDSPGGSLSRGPTTWRH*QKTLWS
Trigger: TGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGT...AGGACCCCGAGAGAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGATGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR CCA 90 bp TCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACC +
Preference number: 2 (lower is better)
Translates to: SACEGTNLGLFSWRSRAREVVTT*RHWQKT
Trigger: GGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTC...CCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR CCA 90 bp GGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACC +
Preference number: 2 (lower is better)
Translates to: GAQQSSGLVVSVPGSGKCEVVTT*RHWQKT
Trigger: GGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTC...GCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR CAA 90 bp GAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCA +
Preference number: 2 (lower is better)
Translates to: EALAEDPLVRTSWHC*QTFCWVFPVRGTAA
Trigger: TGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR GCA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCACGCTGCCTGTGGGACTaGCCTTCCGGGAGGACCAGG +
Preference number: 2 (lower is better)
Translates to: PTSSLPVILSNGESFLIPRCLWD*PSGRTR
Trigger: CCTGGTCCTCCCGGAAGGGCAGTCCCACAGGCAGCG...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR GCA 90 bp TGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGCCTCTACCTGGCTCTGGGAAGTaGTGGGCTTTTGCTTGGCTT +
Preference number: 2 (lower is better)
Translates to: WKGWNPDVHPLGQPAVPLPGSGK*WAFAWL
Trigger: AAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGG...TAGAGGCACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp CTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCCCTCAGCCAGCAGTCTaGTCTTCTCCTCCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: LEWRIFPHSRDTKAQEGAPQPAV*SSPPPR
Trigger: CCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGG...GGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR CCA 90 bp GTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGTGAGGGGACTAACTTaGGCTTGTTCTCCTGGCGGA +
Preference number: 2 (lower is better)
Translates to: VVLGAQQSSGLVVSVPGSVRGLT*ACSPGG
Trigger: TCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC...AGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp CAGCCAGCCGTGCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTGTGAGGGGACTAACTTaGGCTTGTTCTCCTGGCGGA +
Preference number: 2 (lower is better)
Translates to: QPAVPLSLPVRGLTWACSVRGLT*ACSPGG
Trigger: TCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC...AGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACGGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp GTCTTCAGTGCTCTTGGCCTGCACGTGGAGGAGAGTAGGCAGATGTCTGGTGCTCCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCT +
Preference number: 2 (lower is better)
Translates to: VFSALGLHVEESRQMSGAPGWKG*NPDVHP
Trigger: AGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG...AGCACCAGACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR CCA 90 bp GCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCCTGGTTGAGATCATTCTGGCCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGAC +
Preference number: 2 (lower is better)
Translates to: ACLLELVLPGPPWLRSFWPPFPG*KGWNPD
Trigger: GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG...CCAGAATGATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp TCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGTGGCAGAAGACCCTCTaGTCAGGACCTCATGGCATT +
Preference number: 2 (lower is better)
Translates to: SACEGTNLGLFSWRSRARWQKTL*SGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCA...CCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR CCA 90 bp TCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGACCACTTGGAGGCATTaGCAGAAGACCCTCTGGTCA +
Preference number: 2 (lower is better)
Translates to: SACEGTNLGLFSWRSRARTTWRH*QKTLWS
Trigger: TGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGT...CCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR TCA 90 bp GGTAGAACTCTGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGAAGGGATGGAACCCTaGCGTTCATCCTTTAGGGCA +
Preference number: 2 (lower is better)
Translates to: GRTLPCNAASRASISWVEEGMEP*RSSFRA
Trigger: TGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTC...TTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR TCA 90 bp GCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGC +
Preference number: 2 (lower is better)
Translates to: ACSPGGVVLGAQQSSGLVIVLRW*PLGGIG
Trigger: GCCAATGCCTCCAAGTGGTCACCACCTCAGAACTAT...GACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR GCA 90 bp GTGACCACTTGGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGAAGTGCTGGGCTTTTaGTTGGCTTCCAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: VTTWRHWQKTLWSGPHGIEVLGF*LASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTC...AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR GCA 90 bp TGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGCCTCTAGAGAAGGTAGAACTCTaGCCTGCAACGCTGCAAGTC +
Preference number: 2 (lower is better)
Translates to: WKGWNPDVHPLGQPAVPLEKVEL*PATLQV
Trigger: GACTTGCAGCGTTGCAGGGCAGAGTTCTACCTTCTC...TAGAGGCACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp GCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCCTGGTTGAGATCATTCTGGGAGAAGGTAGAACTCTaGCCTGCAACGCTGCAAGTC +
Preference number: 2 (lower is better)
Translates to: ACLLELVLPGPPWLRSFWEKVEL*PATLQV
Trigger: GACTTGCAGCGTTGCAGGGCAGAGTTCTACCTTCTC...CCAGAATGATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp GAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCACTTGGCTTCCAAGGCTaGCACACGCTTCTTATAGTT +
Preference number: 2 (lower is better)
Translates to: EGTNLGLFSWRSRARRSALGFQG*HTLLIV
Trigger: AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAG...TGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR CCA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCACGGACGTCCTGTGGCTaGGCCCAGAAATGGGTGCCG +
Preference number: 2 (lower is better)
Translates to: PTSSLPVILSNGESFLIPRTSCG*AQKWVP
Trigger: CGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCG...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR CCA 90 bp TTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGAGGGGCTGCCCAGAGCTaGAGCACAGTTGAGTTGAAT +
Preference number: 2 (lower is better)
Translates to: FQGHQGSGRGLSIISRARGAAQS*STVELN
Trigger: ATTCAACTCAACTGTGCTCCAGCTCTGGGCAGCCCC...TCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR-3UTR CCA 90 bp AGCCGTGCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCC +
Preference number: 2 (lower is better)
Translates to: SRASISACEGTNLGLFSWRSAII*SCRVSP
Trigger: GGGACTGACACGACAAGACCAGATGATTGCTGAGCG...CCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp CGAGAAGCCTGCTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCAGGGAAGCTCCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCT +
Preference number: 2 (lower is better)
Translates to: REACSAGMLKPLASSREAPGWKG*NPDVHP
Trigger: AGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG...AGCTTCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp TCAAGTGCTGCCTCAGCCAGCAGTCTGCTCTTCTCCTCCTCCAAGGACCAGTTGTGGTTGAGATCATTCTaGAGAGAGGCAGCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: SSAASASSLLFSSSKDQLWLRSF*REAAGP
Trigger: AGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCA...CAACTGGTCCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGGCAGCACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp CTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCAGGGAAGCTTCTTCAGTGAGCCTCAGCCAGCAGTCTaGTCTTCTCCTCCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: LCRDVKATCLIQGSFFSEPQPAV*SSPPPR
Trigger: CCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGG...CTCACTGAAGAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp CGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGCCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGT +
Preference number: 2 (lower is better)
Translates to: RARRSAIIWSCRVSPWLWPHGIA*RLSVGC
Trigger: ACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGG...CCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR CCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGT +
Preference number: 2 (lower is better)
Translates to: APTSSLPVILSNGESFLIPSDVL*LGPEMG
Trigger: ACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGG...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
3UTR-3UTR CCA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTAGGGCTCTTTATAGTTaGTTCCAGCCAGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: LPVWASNRRAPTSSLPVIRALYS*FQPGAG
Trigger: TCCTGCCCCTGGCTGGAACCAACTATAAAGAGCCCT...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR-3UTR CCA 90 bp TTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTTTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: LFSWRSRARRSAIIWSCRLQTFC*VFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAA...ACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR GCA 90 bp CTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCAGGGAAGCTTCTTCAGTGAGGAAGTGCTGGGCTTTTaGTTGGCTTCCAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LCRDVKATCLIQGSFFSEEVLGF*LASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTC...CTCACTGAAGAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR GCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTGGTAGAACTCTGCCCTaGAACGCTGCAAGTCGTGCC +
Preference number: 2 (lower is better)
Translates to: APTSSLPVILSNGESFLIGRTLP*NAASRA
Trigger: GGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR GCA 90 bp GCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCTCCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGT +
Preference number: 2 (lower is better)
Translates to: ALSNHLVLSCQSLALGSAPHGIA*RLSVGC
Trigger: ACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGG...AGCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR GCA 90 bp GTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTCTTGGCTTCCAAGGCTaGCACACGCTTCTTATAGTT +
Preference number: 2 (lower is better)
Translates to: VVLGAQQSSGLVVSVPGSLGFQG*HTLLIV
Trigger: AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAG...AGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR GCA 90 bp TTTCCTGGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCCTTGGCTTCCAAGGCTaGCACACGCTTCTTATAGTT +
Preference number: 2 (lower is better)
Translates to: FPGWKGWNPDVHPLGQPALGFQG*HTLLIV
Trigger: AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAG...GGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
3UTR CAA 90 bp GACTGGTGGCTAAGTGGGGCTGCCCAGAGCTGGAGCACAGTTGAGTaGAATGAATACATGTTTACTTCGTATGAGGCCACCAGGATGGGT +
Preference number: 2 (lower is better)
Translates to: DWWLSGAAQSWSTVE*NEYMFTSYEATRMG
Trigger: ACCCATCCTGGTGGCCTCATACGAAGTAAACATGTATTCATTCAACTCAACTGTGCTCCAGCTCTGGGCAGCCCCACTTAGCCACCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR-3UTR TCA 90 bp CTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCAGGGAAGCTTCTTCAGTGAGATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGC +
Preference number: 2 (lower is better)
Translates to: LCRDVKATCLIQGSFFSEIVLRW*PLGGIG
Trigger: GCCAATGCCTCCAAGTGGTCACCACCTCAGAACTAT...CTCACTGAAGAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR GCA 90 bp CTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCAGGGAAGCTTCTTCAGTGAGGAGAAGGTAGAACTCTaGCCTGCAACGCTGCAAGTC +
Preference number: 2 (lower is better)
Translates to: LCRDVKATCLIQGSFFSEEKVEL*PATLQV
Trigger: GACTTGCAGCGTTGCAGGGCAGAGTTCTACCTTCTC...CTCACTGAAGAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CCA 90 bp AGACCCTCTGGTCAGGACCTCATGGCATTGCTTGCAGACTTTCTGTTGGGTGTTTTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: RPSGQDLMALLADFLLGVLQTFC*VFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAA...AACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR CCA 72 bp CTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATaGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGAG +
Preference number: 3 (lower is better)
Translates to: LSHRTSCGWAQK*VPLPVGLPFRE
Trigger: CTCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
3UTR-3UTR CAA 90 bp CTGGGCCTCAGGCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCGGGACTAACTTGGGCTaGTTCTCCTGGCGGAGTCGT +
Preference number: 3 (lower is better)
Translates to: LGLRLCPAGLRPGSRSLLGTNLG*FSWRSR
Trigger: ACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCC...GAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCCTGAGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR GCA 72 bp GCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTaGCCTTCCGGGAGGACCAGGGTGTCTTCAGTGCTC +
Preference number: 3 (lower is better)
Translates to: AGPRNGCRCLWD*PSGRTRVSSVL
Trigger: GAGCACTGAAGACACCCTGGTCCTCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR CCA 72 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTaGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTG +
Preference number: 3 (lower is better)
Translates to: EPDKLSHRTSCG*AQKWVPLPVGL
Trigger: CAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
3UTR CCA 72 bp GGAGGGTCACTCTCTCGGGGTCCTGTCCCCGCAGCATaGCTAGTCGCTTGGCCAGGGCCAGAATCCGTTCCT +
Preference number: 3 (lower is better)
Translates to: GGSLSRGPVPAA*LVAWPGPESVP
Trigger: AGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGGACCCCGAGAGAGTGACCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR CCA 72 bp AGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGG +
Preference number: 3 (lower is better)
Translates to: SRARQALPSDVL*LGPEMGAAACG
Trigger: CCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
3UTR CCA 72 bp TCTCGGGGTCCTGTCCCCGCAGCATGGCTAGTCGCTTaGCCAGGGCCAGAATCCGTTCCTGCCTCGTGTTCT +
Preference number: 3 (lower is better)
Translates to: SRGPVPAAWLVA*PGPESVPASCS
Trigger: AGAACACGAGGCAGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGGACCCCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR GCA 72 bp CCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTaGAGGGATGTTAAAGCCACTTGCCTCATCCAGGGA +
Preference number: 3 (lower is better)
Translates to: PAGLRPGSRSLL*RDVKATCLIQG
Trigger: TCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CAA 90 bp TGGGCCACCCTGGTTGAGATCATTCTGGAGAGAGGCAGCTGGGCCTCCTCCTTTCTGTGTCTGCTGGGCTaGGGTCCTGGTGTCCGGTGT +
Preference number: 3 (lower is better)
Translates to: WATLVEIILERGSWASSFLCLLG*GPGVRC
Trigger: ACACCGGACACCAGGACCCAAGCCCAGCAGACACAG...AAAGGAGGAGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CAA 90 bp CCCCGCAGCATGGCTAGTCGCTTGGCCAGGGCCAGAATCCGTTCCTGCCTCGTGTCCTCCAAGGACCAGTaGGCCTGCCTCTTGGAATTA +
Preference number: 3 (lower is better)
Translates to: PRSMASRLARARIRSCLVSSKDQ*ACLLEL
Trigger: TAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGA...CACGAGGCAGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCTGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR GCA 72 bp ATGGCTAGTCGCTTGGCCAGGGCCAGAATCCGTTCCTaGCTCGTGTTCTCCTCCCGCAACTCAAGTGCTGCC +
Preference number: 3 (lower is better)
Translates to: MASRLARARIRS*LVFSSRNSSAA
Trigger: GGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR GCA 72 bp TCCGGGAGGACCAGGGTGTCTTCAGTGCTCTTGGCCTaGACGTGGAGGAGAGTAGGCAGATGTCTGGTGCTC +
Preference number: 3 (lower is better)
Translates to: SGRTRVSSVLLA*TWRRVGRCLVL
Trigger: GAGCACCAGACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACACCCTGGTCCTCCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR CAA 90 bp CGTCATCACTGTCTGGGAGGCGATAGTCCTGGAGGGTCACTCTCTCGGGGTCCTGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 3 (lower is better)
Translates to: RHHCLGGDSPGGSLSRGPVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...AGGACCCCGAGAGAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGATGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CAA 90 bp CTTCCGGGAGGACCAGGGTGTCTTCAGTGCTCTTGGCCTGCACGTGGAGGAGAGCTTGCAGACTTTCTGTaGGGTGTTCCCAGTCCGAGG +
Preference number: 3 (lower is better)
Translates to: LPGGPGCLQCSWPARGGELADFL*GVPSPR
Trigger: CCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAG...CTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACACCCTGGTCCTCCCGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR TCA 72 bp CGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTaGCGTTCATCCTTTAGGGCAGCCAGCCGTGCCTCT +
Preference number: 3 (lower is better)
Translates to: RASISWVEGMEP*RSSFRAASRAS
Trigger: AGAGGCACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR TCA 72 bp TCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCACTaGAGCTTAGGCAGCCTGAACAGAAGGCCCTGCCAC +
Preference number: 3 (lower is better)
Translates to: SVGCSQSEALLH*SLGSLNRRPCH
Trigger: GTGGCAGGGCCTTCTGTTCAGGCTGCCTAAGCTTCAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR CCA 72 bp TCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTG +
Preference number: 3 (lower is better)
Translates to: SWRSRARRSAII*SCRVSPWLWEV
Trigger: CACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR CCA 72 bp GCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCCTaGTTGAGATCATTCTGGAGAGAGGCAGCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: ACLLELVLPGPP*LRSFWREAAGP
Trigger: AGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CAA 90 bp TGGGCCACCCTGGTTGAGATCATTCTGGAGAGAGGCAGCTGGGCCTCCTCCTTTTGTGAGGGGACTAACTaGGGCTTGTTCTCCTGGCGG +
Preference number: 3 (lower is better)
Translates to: WATLVEIILERGSWASSFCEGTN*GLFSWR
Trigger: CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACA...AAAGGAGGAGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR-3UTR CAA 90 bp GCAGCCAGCCGTGCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCGACCACTTGGAGGCATaGGCAGAAGACCCTCTGGTC +
Preference number: 3 (lower is better)
Translates to: AASRASISACEGTNLGLFDHLEA*AEDPLV
Trigger: GACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC...GAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACGGCTGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
3UTR-3UTR CAA 90 bp CGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGACCACTTGGAGGCATaGGCAGAAGACCCTCTGGTC +
Preference number: 3 (lower is better)
Translates to: RARRSAIIWSCRVSPWLWDHLEA*AEDPLV
Trigger: GACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC...CCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR CAA 90 bp GGTAGAACTCTGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 3 (lower is better)
Translates to: GRTLPCNAASRASISWVEVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...TTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR CAA 90 bp TCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTATGTGAGGGGACTAACTaGGGCTTGTTCTCCTGGCGG +
Preference number: 3 (lower is better)
Translates to: SLPVRGLTWACSPGGVVLCEGTN*GLFSWR
Trigger: CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACA...TAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR GCA 72 bp TTCCTGCCTCGTGTTCTCCTCCCGCAACTCAAGTGCTaGCTCAGCCAGCAGTCTGCTCTTCTCCTCCTCCAA +
Preference number: 3 (lower is better)
Translates to: FLPRVLLPQLKC*LSQQSALLLLQ
Trigger: TTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR CCA 72 bp TCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGG +
Preference number: 3 (lower is better)
Translates to: SACEGTNLGLFS*RSRARRSAIIW
Trigger: CCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR CCA 72 bp CTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: LQVVPPFPGWKG*NPDVHPLGQPA
Trigger: GGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR CAA 90 bp CAGCCAGCCGTGCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCTTGCAGACTTTCTGTaGGGTGTTCCCAGTCCGAGG +
Preference number: 3 (lower is better)
Translates to: QPAVPLSLPVRGLTWACSLADFL*GVPSPR
Trigger: CCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAG...AGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACGGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
3UTR-3UTR CAA 90 bp GGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCTTGCAGACTTTCTGTaGGGTGTTCCCAGTCCGAGG +
Preference number: 3 (lower is better)
Translates to: GLFSWRSRARRSAIIWSCLADFL*GVPSPR
Trigger: CCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAG...ACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR CAA 90 bp GCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTG +
Preference number: 3 (lower is better)
Translates to: ALQRCKSCLHFLGGRDGTTSWHC*QTFCWV
Trigger: CACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGT...GGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
3UTR-3UTR CAA 90 bp GAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTG +
Preference number: 3 (lower is better)
Translates to: EGTNLGLFSWRSRARRSATSWHC*QTFCWV
Trigger: CACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGT...TGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR CCA 72 bp TGCCGAGAGGTCAGGGGTCCGGTTAGGGCGCATTACTaGAAGAGAGATACTGAGACTGAATGGCAGGCAGGT +
Preference number: 3 (lower is better)
Translates to: CREVRGPVRAHY*KRDTETEWQAG
Trigger: ACCTGCCTGCCATTCAGTCTCAGTATCTCTCTTCCAGTAATGCGCCCTAACCGGACCCCTGACCTCTCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR CCA 72 bp CCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGACGTTCATCCTTTAGGG +
Preference number: 3 (lower is better)
Translates to: PATLQVVPPFPG*KGWNPDVHPLG
Trigger: CCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR-3UTR CAA 90 bp GGGTTTGAGAAGGTAGAACTCTGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 3 (lower is better)
Translates to: GFEKVELCPATLQVVPPFVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...AAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACCTTCTCAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
3UTR GCA 72 bp CAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCA +
Preference number: 3 (lower is better)
Translates to: QKTLWSGPHGIA*RLSVGCSQSEA
Trigger: TGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR CCA 72 bp GCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGCTTGGCTTCCAAGGCT +
Preference number: 3 (lower is better)
Translates to: AIIWSCRVSPWL*EVLGFCLASKA
Trigger: AGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
3UTR CCA 72 bp AGGACCAGGGTGTCTTCAGTGCTCTTGGCCTGCACGTaGAGGAGAGTAGGCAGATGTCTGGTGCTCTTTAAG +
Preference number: 3 (lower is better)
Translates to: RTRVSSVLLACT*RRVGRCLVLFK
Trigger: CTTAAAGAGCACCAGACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACACCCTGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR-3UTR CAA 90 bp AGACCCTCTGGTCAGGACCTCATGGCATTGCTTGCAGACTTTCTGTTGGGTGTTGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 3 (lower is better)
Translates to: RPSGQDLMALLADFLLGVVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...AACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR CAA 90 bp TCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTG +
Preference number: 3 (lower is better)
Translates to: SWRSRARRSAIIWSCRVSQDLMA*LADFLL
Trigger: CAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTG...ACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR CAA 90 bp GGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTG +
Preference number: 3 (lower is better)
Translates to: GLFSWRSRARRSAIIWSCQDLMA*LADFLL
Trigger: CAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTG...ACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR TCA 72 bp CAAGGCTGCCACACGCTTCTTATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGCAGAAGACCCTCTGGT +
Preference number: 3 (lower is better)
Translates to: QGCHTLLIVLRW*PLGGIGRRPSG
Trigger: ACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTCAGAACTATAAGAAGCGTGTGGCAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR GCA 72 bp TTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTaGTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGA +
Preference number: 3 (lower is better)
Translates to: LAEDPLVRTSWH*LQTFCWVFPVR
Trigger: TCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR CCA 72 bp AGGGAAGCTTCTTCAGTGAGCTGCTGCAGGACTCTTTaGATGGCTGTCTCCTCATCCTCGTCGTCATCACTG +
Preference number: 3 (lower is better)
Translates to: REASSVSCCRTL*MAVSSSSSSSL
Trigger: CAGTGATGACGACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAGCTCACTGAAGAAGCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR CCA 72 bp CCACACGCTTCTTATAGTTCTGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCT +
Preference number: 3 (lower is better)
Translates to: PHASYSSEVVTT*RHWQKTLWSGP
Trigger: AGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTCAGAACTATAAGAAGCGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR CAA 90 bp GCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGACAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTG +
Preference number: 3 (lower is better)
Translates to: ASNRRAPTSSLPVILSNGQDLMA*LADFLL
Trigger: CAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTG...TCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR CCA 72 bp TCTTATAGTTCTGAGGTGGTGACCACTTGGAGGCATTaGCAGAAGACCCTCTGGTCAGGACCTCATGGCATT +
Preference number: 3 (lower is better)
Translates to: SYSSEVVTTWRH*QKTLWSGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTCAGAACTATAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
3UTR-3UTR CAA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGAAGCAATCATCTGGTCTaGTCGTGTCAGTCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGSNHLV*SCQSLA
Trigger: AGCCAGGGACTGACACGACAAGACCAGATGATTGCT...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR GCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGACGCGCCGGGTGGCTGTaGTCTCCCCGTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGRAGWL*SPRGPC
Trigger: ACAGGGGCCACGGGGAGAGCACAGCCACCCGGCGCG...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGACTGGGCCTCAGGCTCTaGCCCGCGGGGTTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGLGLRL*PAGLRP
Trigger: TGGACGCAACCCCGCGGGGCAGAGCCTGAGGCCCAG...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGACGCTGCCTGTGGGACTaGCCTTCCGGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGRCLWD*PSGRTR
Trigger: CCTGGTCCTCCCGGAAGGGCAGTCCCACAGGCAGCG...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GGCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGCAGCACCGCAGGGTCTaGAGAGCTGAGATCACGCCG +
Preference number: 4 (lower is better)
Translates to: GSAPRGCVQGREACSAGMQHRRV*RAEITP
Trigger: CGGCGTGATCTCAGCTCTGCAGACCCTGCGGTGCTG...CATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CCCCGCAGCATGGCTAGTCGCTTGGCCAGGGCCAGAATCCGTTCCTGCCTCGTGTCTGCCCCGCGGGGTTaGGTCCAGGGTCGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRSMASRLARARIRSCLVSAPRG*VQGREA
Trigger: GGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGA...CACGAGGCAGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCTGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CTGGGCCTCAGGCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCGCCAGAATCCGTTCCTaGCTCGTGTTCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LGLRLCPAGLRPGSRSLLARIRS*LVFSSR
Trigger: GCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGC...GAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCCTGAGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGCGAGGGTCGGCGCTATaGCCTCCGCAGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWRGSAL*PPQAGS
Trigger: GGAGCCCGCCTGCGGAGGGCATAGCGCCGACCCTCG...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTGGGCCTCAGGCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCCAGCGCAGCGTAGGGTaGCATCCTCATTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: LGLRLCPAGLRPGSRSLLQRSVG*HPHCRC
Trigger: GCATCTGCAATGAGGATGCCACCCTACGCTGCGCTG...GAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCCTGAGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAACGCCCTTCCCTTCCCTaGCCTGCCCCGCCCCACACG +
Preference number: 4 (lower is better)
Translates to: ISRARQALPSDVLWLGPERPSLP*PAPPHT
Trigger: CGTGTGGGGCGGGGCAGGGCAGGGAAGGGAAGGGCG...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS-3UTR GCA 90 bp GGCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGAGCAGATCCTGTGTCTaGTGGGCTTGGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSAPRGCVQGREACSAGMSRSCV*WAWVLV
Trigger: CACCAGGACCCAAGCCCAGCAGACACAGGATCTGCT...CATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGTCTGCCCCGCGGGGTTaGGTCCAGGGTCGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVSAPRG*VQGREA
Trigger: GGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGA...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CGTCATCACTGTCTGGGAGGCGATAGTCCTGGAGGGTCACTCTCTCGGGGTCCTCTGGGCCTCAGGCTCTaGCCCGCGGGGTTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: RHHCLGGDSPGGSLSRGPLGLRL*PAGLRP
Trigger: TGGACGCAACCCCGCGGGGCAGAGCCTGAGGCCCAG...AGGACCCCGAGAGAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGATGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GGCCTGTGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTGCCCCACACGCCCACTaGCACTGTCCCGCCGCGACC +
Preference number: 4 (lower is better)
Translates to: GLCPRARLQGSPVDSVWSAPHAH*HCPAAT
Trigger: GGTCGCGGCGGGACAGTGCCAGTGGGCGTGTGGGGC...AGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS-3UTR CCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGAAGCACCTACTCTCCATaGTGGCTCCCAGCACCGCAG +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGSTYSP*WLPAPQ
Trigger: CTGCGGTGCTGGGAGCCACCATGGAGAGTAGGTGCT...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000355341.8
ENST00000570108.5
CDS-3UTR CCA 90 bp GCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTTGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ALPRGVASRVEKPALQGCCRVSP*LWEVLG
Trigger: GCCCAGCACTTCCCAGAGCCAGGGACTGACACGACA...ACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
3UTR CAA 72 bp CTCTCGGGGTCCTGTCCCCGCAGCATGGCTAGTCGCTaGGCCAGGGCCAGAATCCGTTCCTGCCTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: LSGSCPRSMASR*ARARIRSCLVF
Trigger: GAACACGAGGCAGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGGACCCCGAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGAAGCAGATCCTGTGTCTaGTGGGCTTGGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGSRSCV*WAWVLV
Trigger: CACCAGGACCCAAGCCCAGCAGACACAGGATCTGCT...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGACCTCAGCCAGCAGTCTaGTCTTCTCCTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGPQPAV*SSPPPR
Trigger: CCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGG...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGACTCCCGCAACTCAAGTaGTGCCTCAGCCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGLPQLK*CLSQQS
Trigger: AGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAG...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CTCTCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCACGAGGGTCGGCGCTATaGCCTCCGCAGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSLPVWASNRRAPTSSLPRGSAL*PPQAGS
Trigger: GGAGCCCGCCTGCGGAGGGCATAGCGCCGACCCTCG...TGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp ACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTGCCCCACACGCCCACTaGCACTGTCCCGCCGCGACC +
Preference number: 4 (lower is better)
Translates to: TWACSPGGVVLGAQQSSGAPHAH*HCPAAT
Trigger: GGTCGCGGCGGGACAGTGCCAGTGGGCGTGTGGGGC...ACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568062.5
CDS-3UTR CCA 90 bp TCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGACGCCGGCCAAGTCCTaGGCCCCTTGGACCCTCACC +
Preference number: 4 (lower is better)
Translates to: SSVEPDKLSHRTSCGWAQTPAKS*APWTLT
Trigger: GGTGAGGGTCCAAGGGGCCCAGGACTTGGCCGGCGT...CTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS-3UTR CCA 90 bp CTCCCTGGGCCACCCTGGTTGAGATCATTCTGGAGAGAGGCAGCTGGGCCTCCTCCTCAGCCTCAGGCCTaGGGTCCACATCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPGPPWLRSFWREAAGPPPQPQA*GPHPGP
Trigger: AGGCCCAGGATGTGGACCCCAGGCCTGAGGCTGAGG...AGGAGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGAAGCTCAAAGGCATCATaGCCCTCTCGGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGSSKAS*PSRKQR
Trigger: CCGCTGCTTCCGAGAGGGCCATGATGCCTTTGAGCT...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGCGGACGTCCTGTGGCTaGGCCCAGAAATGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVRTSCG*AQKWVP
Trigger: CGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCG...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CCACATCCTGGGCCTCAGGCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGGGAATTAGTGCTCCCTaGGCCACCCTGGTTGAGATC +
Preference number: 4 (lower is better)
Translates to: PHPGPQALPRGVASRVEKGISAP*ATLVEI
Trigger: GATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCC...CTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCCTGAGGCCCAGGATGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGGCTGTGCTCTCCCCGTaGCCCCTGTCTCCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVAVLSP*PLSPRG
Trigger: GCCTCTAGGAGACAGGGGCCACGGGGAGAGCACAGC...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCCTGGGCCTCAGGCTCTaGCCCGCGGGGTTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVLGLRL*PAGLRP
Trigger: TGGACGCAACCCCGCGGGGCAGAGCCTGAGGCCCAG...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGACATCCTCATTGCAGATaGAGCACCAGGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGHPHCR*STRGAP
Trigger: AGGAGCTCCCCTGGTGCTGCATCTGCAATGAGGATG...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GTGTTCTCCTCCCGCAACTCAAGTGCTGCCTCAGCCAGCAGTCTGCTCTTCTCCCGCTGCCTGTGGGACTaGCCTTCCGGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: VFSSRNSSAASASSLLFSRCLWD*PSGRTR
Trigger: CCTGGTCCTCCCGGAAGGGCAGTCCCACAGGCAGCG...GGAGAAGAGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR GCA 90 bp GGCCTGTGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCGCTGCCTGTGGGACTaGCCTTCCGGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GLCPRARLQGSPVDSVWSRCLWD*PSGRTR
Trigger: CCTGGTCCTCCCGGAAGGGCAGTCCCACAGGCAGCG...AGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGAGGTCTCTCCCCATCATaGCTCTCACTTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGGLSPS*LSLPVW
Trigger: CCAGACTGGAAGTGAGAGGCATGATGGGGAGAGACC...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCGCGCCGGGTGGCTGTaGTCTCCCCGTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: HQGSGRGLSIISRARQALRAGWL*SPRGPC
Trigger: ACAGGGGCCACGGGGAGAGCACAGCCACCCGGCGCG...GAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp GGCCTGTGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTGCGCCGCTCGGAGCCTaGAGTCCTCACGCGCGCTTA +
Preference number: 4 (lower is better)
Translates to: GLCPRARLQGSPVDSVWSAPLGA*SPHARL
Trigger: TAAGCGCGCGTGAGGACTGCAGGCTCCGAGCGGCGC...AGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGAGTGAGGGGACTAACTTaGGCTTGTTCTCCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGVRGLT*ACSPGG
Trigger: TCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGACCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGPGWKG*NPDVHP
Trigger: AGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTCCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: ALPRGVASRVEKPALQGCPPFPG*KGWNPD
Trigger: GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG...ACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGACCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGPPFPG*KGWNPD
Trigger: GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGCCTCAGCCTCAGGCCTaGGGTCCACATCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWPQPQA*GPHPGP
Trigger: AGGCCCAGGATGTGGACCCCAGGCCTGAGGCTGAGG...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTGCCTCGTGTTCTCCTCCCGCAACTCAAGTGCTGCCTCAGCCAGCAGTCTGCTCCTCAGCCTCAGGCCTaGGGTCCACATCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPRVLLPQLKCCLSQQSAPQPQA*GPHPGP
Trigger: AGGCCCAGGATGTGGACCCCAGGCCTGAGGCTGAGG...AGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGGGGTGCCGCTGCCTGTaGGACTGCCCTTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWGCRCL*DCPSGR
Trigger: CCTCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCC...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCGGCTGGGCCCAGAAATaGGTGCCGCTGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ALQRCKSCLHFLGGRDGTGWAQK*VPLPVG
Trigger: TCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCC...GGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGGCTGGGCCCAGAAATaGGTGCCGCTGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWGWAQK*VPLPVG
Trigger: TCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCC...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGCTGTGCTCTCCCCGTaGCCCCTGTCTCCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWAVLSP*PLSPRG
Trigger: GCCTCTAGGAGACAGGGGCCACGGGGAGAGCACAGC...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTTAACAGCCGTATCTCCATaGTGGCTCCCAGCACCGCAG +
Preference number: 4 (lower is better)
Translates to: SAPRGCVQGREACSAGMLTAVSP*WLPAPQ
Trigger: CTGCGGTGCTGGGAGCCACCATGGAGATACGGCTGT...TAACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR GCA 90 bp TGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCACGCCCTTCCCTTCCCTaGCCTGCCCCGCCCCACACG +
Preference number: 4 (lower is better)
Translates to: WRIFPHSRDTKAQEGAYPRPSLP*PAPPHT
Trigger: CGTGTGGGGCGGGGCAGGGCAGGGAAGGGAAGGGCG...TGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS-3UTR GCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCTCTGCCCCGCGGGGTTaGGTCCAGGGTCGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVSAPRG*VQGREA
Trigger: GGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGA...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACTCTGCCCCGCGGGGTTaGGTCCAGGGTCGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SRDTKAQEGAYPSSVEPDSAPRG*VQGREA
Trigger: GGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGA...GTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCACTGGGCCTCAGGCTCTaGCCCGCGGGGTTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPLGLRL*PAGLRP
Trigger: TGGACGCAACCCCGCGGGGCAGAGCCTGAGGCCCAG...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTGGGCCTCAGGCTCTaGCCCGCGGGGTTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LPVWASNRRAPTSSLPVILGLRL*PAGLRP
Trigger: TGGACGCAACCCCGCGGGGCAGAGCCTGAGGCCCAG...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCCTGGGCCTCAGGCTCTaGCCCGCGGGGTTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LEWRIFPHSRDTKAQEGALGLRL*PAGLRP
Trigger: TGGACGCAACCCCGCGGGGCAGAGCCTGAGGCCCAG...GGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACCGCTGCCTGTGGGACTaGCCTTCCGGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: SRDTKAQEGAYPSSVEPDRCLWD*PSGRTR
Trigger: CCTGGTCCTCCCGGAAGGGCAGTCCCACAGGCAGCG...GTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTCGCTGCCTGTGGGACTaGCCTTCCGGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCRCLWD*PSGRTR
Trigger: CCTGGTCCTCCCGGAAGGGCAGTCCCACAGGCAGCG...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAAGGGCCCAGAAATGGGTaGCGCTGCCTGTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKGPRNG*RCLWDC
Trigger: GCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCC...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TCCTTTGCCAGTAAGGCAGGAAGCAGGGTGTGTGTGCATTGTTCCTGCGTGCATGCCCCACACGCCCACTaGCACTGTCCCGCCGCGACC +
Preference number: 4 (lower is better)
Translates to: SFASKAGSRVCVHCSCVHAPHAH*HCPAAT
Trigger: GGTCGCGGCGGGACAGTGCCAGTGGGCGTGTGGGGC...ATGCACGCAGGAACAATGCACACACACCCTGCTTCCTGCCTTACTGGCAAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGAGCACCTACTCTCCATaGTGGCTCCCAGCACCGCAG +
Preference number: 4 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVSTYSP*WLPAPQ
Trigger: CTGCGGTGCTGGGAGCCACCATGGAGAGTAGGTGCT...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000355341.8
ENST00000570108.5
CDS-3UTR CCA 90 bp GCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: ACEGTNLGLFSWRSRARRLGLFS*RSRARR
Trigger: GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAA...GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGGGTGCCGCTGCCTGTaGGACTGCCCTTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWGCRCL*DCPSGR
Trigger: CCTCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCC...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGGGTTCATTCGGGTCCTaGGCGGGGAGCGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWGSFGS*AGSEGR
Trigger: CCGACCCTCGCTCCCCGCCCAGGACCCGAATGAACC...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCGGTTCATTCGGGTCCTaGGCGGGGAGCGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSGSFGS*AGSEGR
Trigger: CCGACCCTCGCTCCCCGCCCAGGACCCGAATGAACC...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp CTCTCTCGGGGTCCTGTCCCCGCAGCATGGCTAGTCGCTTGGCCAGGGCCAGAACTCCCTGGGCCACCCTaGTTGAGATCATTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSRGPVPAAWLVAWPGPELPGPP*LRSFWR
Trigger: TCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAG...TTCTGGCCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGGACCCCGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAACCTGTCCCCGCAGCATaGCTAGTCGCTTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKPVPAA*LVAWPG
Trigger: CCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGG...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCATCCGGACGCTCTCCTaGAGCCAGCGTACGGCAGCG +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGIRTLS*SQRTAA
Trigger: CGCTGCCGTACGCTGGCTGCAGGAGAGCGTCCGGAT...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp AGAAGACCCTCTGGTCAGGACCTCATGGCATTGCTTGCAGACTTTCTGTTGGGTCGCCCTTCCCTTCCCTaGCCTGCCCCGCCCCACACG +
Preference number: 4 (lower is better)
Translates to: RRPSGQDLMALLADFLLGRPSLP*PAPPHT
Trigger: CGTGTGGGGCGGGGCAGGGCAGGGAAGGGAAGGGCG...ACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568062.5
CDS-3UTR GCA 90 bp CACTGTCTGGGAGGCGATAGTCCTGGAGGGTCACTCTCTCGGGGTCCTGTCCCCTCTGCCCTGCAACGCTaGAAGTCGTGCCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: HCLGGDSPGGSLSRGPVPSALQR*KSCLHF
Trigger: GAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGA...GGGGACAGGACCCCGAGAGAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGAGCTTCTTCAGTGAGCTaGTGCAGGACTCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGASSVS*CRTLWM
Trigger: CATCCAAAGAGTCCTGCAGCAGCTCACTGAAGAAGC...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GGCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGGATGTTAAAGCCACTTaGCTCATCCAGGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GSAPRGCVQGREACSAGMDVKAT*LIQGSF
Trigger: GAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATC...CATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGTCTGCCCCGCGGGGTTaGGTCCAGGGTCGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSIISRARQALPSDVLWLSAPRG*VQGREA
Trigger: GGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGA...CAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CGAGAAGCCTGCTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCAGGGAAGCTTCTGCCCCGCGGGGTTaGGTCCAGGGTCGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: REACSAGMLKPLASSREASAPRG*VQGREA
Trigger: GGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGA...AGCTTCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGAGAAATGGGTGCCGCTaGCTGTGGGACTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWRNGCR*LWDCPS
Trigger: GGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCT...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TGTTCTCCTCCCGCAACTCAAGTGCTGCCTCAGCCAGCAGTCTGCTCTTCTCCTGGGCCCAGAAATGGGTaGCGCTGCCTGTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: CSPPATQVLPQPAVCSSPGPRNG*RCLWDC
Trigger: GCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCC...AGGAGAAGAGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR GCA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAACAGGGGAGGGGCCTGTaGCCTAGAGCCAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKQGRGL*PRARLQ
Trigger: CTGTAACCTGGCTCTAGGGCACAGGCCCCTCCCCTG...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp GCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCCCTCAGCCAGCAGTCTaGTCTTCTCCTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: ACEGTNLGLFSWRSRARRPQPAV*SSPPPR
Trigger: CCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGG...GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCCAGAATCCGTTCCTaGCTCGTGTTCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LPVRGLTWACSPGGVVLGARIRS*LVFSSR
Trigger: GCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGC...GCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp TTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGAGCGCCGCTCGGAGCCTaGAGTCCTCACGCGCGCTTA +
Preference number: 4 (lower is better)
Translates to: FQGHQGSGRGLSIISRARAPLGA*SPHARL
Trigger: TAAGCGCGCGTGAGGACTGCAGGCTCCGAGCGGCGC...TCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp CTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCAGCACCTACTCTCCATaGTGGCTCCCAGCACCGCAG +
Preference number: 4 (lower is better)
Translates to: LPVRGLTWACSPGGVVLGSTYSP*WLPAPQ
Trigger: CTGCGGTGCTGGGAGCCACCATGGAGAGTAGGTGCT...GCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp TCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGTGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSVEPDKLSHRTSCGWAQCRVSP*LWEVLG
Trigger: GCCCAGCACTTCCCAGAGCCAGGGACTGACACGACA...CTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GAGGCAGCTGGGCCTCCTCCTTTCCAGCTTTCATCGATAGCCACCTCAGCTGCCTGTGTCTGCTGGGCTTaGGTCCTGGTGTCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: EAAGPPPFQLSSIATSAACVCWA*VLVSGV
Trigger: CACACCGGACACCAGGACCCAAGCCCAGCAGACACA...GGCAGCTGAGGTGGCTATCGATGAAAGCTGGAAAGGAGGAGGCCCAGCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGAGATCCTGTGTCTGCTaGGCTTGGGTCCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVRSCVC*AWVLVS
Trigger: GGACACCAGGACCCAAGCCCAGCAGACACAGGATCT...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCCCTCAGCCTCAGGCCTaGGGTCCACATCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGPQPQA*GPHPGP
Trigger: AGGCCCAGGATGTGGACCCCAGGCCTGAGGCTGAGG...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGGGGTGCCGCTGCCTGTaGGACTGCCCTTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALEGCRCL*DCPSGR
Trigger: CCTCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCC...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGGGCTGGGCCCAGAAATaGGTGCCGCTGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWGWAQK*VPLPVG
Trigger: TCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCC...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCGGACGTCCTGTGGCTaGGCCCAGAAATGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWRTSCG*AQKWVP
Trigger: CGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCG...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGCGGACGTCCTGTGGCTaGGCCCAGAAATGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: VWASNRRAPTSSLPVILSRTSCG*AQKWVP
Trigger: CGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCG...CGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCGGACGTCCTGTGGCTaGGCCCAGAAATGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SWRSRARRSAIIWSCRVSRTSCG*AQKWVP
Trigger: CGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCG...ACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CCA 90 bp GGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGCCTCCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: GWKGWNPDVHPLGQPAVPPSDVL*LGPEMG
Trigger: ACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGG...AGGCACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGCCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWPSDVL*LGPEMG
Trigger: ACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGG...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGTTCATTCGGGTCCTaGGCGGGGAGCGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: LSIISRARQALPSDVLWLGSFGS*AGSEGR
Trigger: CCGACCCTCGCTCCCCGCCCAGGACCCGAATGAACC...CAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTCGCCTCGGCCACTGCTaGCATCCGCTCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCRLGHC*HPLSRF
Trigger: GAACCTGGAGAGCGGATGCCAGCAGTGGCCGAGGCG...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TTTCCTGGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCCCTGTCCCCGCAGCATaGCTAGTCGCTTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FPGWKGWNPDVHPLGQPAPVPAA*LVAWPG
Trigger: CCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGG...GGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTCCTGTCCCCGCAGCATaGCTAGTCGCTTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCPVPAA*LVAWPG
Trigger: CCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGG...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGCTGTGCTCTCCCCGTaGCCCCTGTCTCCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCAVLSP*PLSPRG
Trigger: GCCTCTAGGAGACAGGGGCCACGGGGAGAGCACAGC...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
3UTR CAA 72 bp TGCCCTTCCGGGAGGACCAGGGTGTCTTCAGTGCTCTaGGCCTGCACGTGGAGGAGAGTAGGCAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: CPSGRTRVSSVL*ACTWRRVGRCL
Trigger: CAGACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACACCCTGGTCCTCCCGGAAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR GCA 90 bp TCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATCCGGACGCTCTCCTaGAGCCAGCGTACGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SGLLIGGPRLLPSQSFSRIRTLS*SQRTAA
Trigger: CGCTGCCGTACGCTGGCTGCAGGAGAGCGTCCGGAT...TCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCAATCCGGACGCTCTCCTaGAGCCAGCGTACGGCAGCG +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPIRTLS*SQRTAA
Trigger: CGCTGCCGTACGCTGGCTGCAGGAGAGCGTCCGGAT...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp ATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTTCCCTTCCCTGCCCTaGCCCGCCCCACACGCCCAC +
Preference number: 4 (lower is better)
Translates to: IGGPRLLPSQSFSRMENLFPSLP*PAPHAH
Trigger: GTGGGCGTGTGGGGCGGGGCAGGGCAGGGAAGGGAA...AAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS-3UTR GCA 90 bp GTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTCAGCACCGCAGGGTCTaGAGAGCTGAGATCACGCCG +
Preference number: 4 (lower is better)
Translates to: VVLGAQQSSGLVVSVPGSQHRRV*RAEITP
Trigger: CGGCGTGATCTCAGCTCTGCAGACCCTGCGGTGCTG...AGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCCAGCACCGCAGGGTCTaGAGAGCTGAGATCACGCCG +
Preference number: 4 (lower is better)
Translates to: ACSPGGVVLGAQQSSGLVQHRRV*RAEITP
Trigger: CGGCGTGATCTCAGCTCTGCAGACCCTGCGGTGCTG...GACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGACCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGPHGIA*RLSVGC
Trigger: ACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGG...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGGTAGAACTCTGCCCTaGAACGCTGCAAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWGRTLP*NAASRA
Trigger: GGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CTCCTCCAAGGACCAGTTGGCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCAGCAGATCCTGTGTCTaGTGGGCTTGGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LLQGPVGLPLGISAPWATSRSCV*WAWVLV
Trigger: CACCAGGACCCAAGCCCAGCAGACACAGGATCTGCT...GGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp ATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTCTGGGCCTCAGGCTCTaGCCCGCGGGGTTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: IGGPRLLPSQSFSRMENLLGLRL*PAGLRP
Trigger: TGGACGCAACCCCGCGGGGCAGAGCCTGAGGCCCAG...AAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GGCCTGTGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTAGAAATGGGTGCCGCTaGCTGTGGGACTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLCPRARLQGSPVDSVWSRNGCR*LWDCPS
Trigger: GGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCT...AGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAAAGAAATGGGTGCCGCTaGCTGTGGGACTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKRNGCR*LWDCPS
Trigger: GGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCT...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGGCCCAGAAATGGGTaGCGCTGCCTGTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: LSIISRARQALPSDVLWLGPRNG*RCLWDC
Trigger: GCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCC...CAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGCCGCAACTCAAGTGCTaGCTCAGCCAGCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWPQLKC*LSQQSA
Trigger: AGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGG...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCGCCAGAATCCGTTCCTaGCTCGTGTTCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CPRARLQGSPVDSVWSLPARIRS*LVFSSR
Trigger: GCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGC...GGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCAGCACCTACTCTCCATaGTGGCTCCCAGCACCGCAG +
Preference number: 4 (lower is better)
Translates to: CPRARLQGSPVDSVWSLPSTYSP*WLPAPQ
Trigger: CTGCGGTGCTGGGAGCCACCATGGAGAGTAGGTGCT...GGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS-3UTR CCA 90 bp TGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACAGCACCTACTCTCCATaGTGGCTCCCAGCACCGCAG +
Preference number: 4 (lower is better)
Translates to: CPATLQVVPPFPGWKGWNSTYSP*WLPAPQ
Trigger: CTGCGGTGCTGGGAGCCACCATGGAGAGTAGGTGCT...GTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567756.5
ENST00000569057.5
CDS-3UTR CCA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAATGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ISRARQALPSDVLWLGPECRVSP*LWEVLG
Trigger: GCCCAGCACTTCCCAGAGCCAGGGACTGACACGACA...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GGCCTGTGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: GLCPRARLQGSPVDSVWSLGLFS*RSRARR
Trigger: GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAA...AGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: GVVLGAQQSSGLVVSVPGLGLFS*RSRARR
Trigger: GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAA...GCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGCCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVPGWKG*NPDVHP
Trigger: AGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAATGTGTCTGCTGGGCTTaGGTCCTGGTGTCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: ISRARQALPSDVLWLGPECVCWA*VLVSGV
Trigger: CACACCGGACACCAGGACCCAAGCCCAGCAGACACA...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGAGATCCTGTGTCTGCTaGGCTTGGGTCCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWRSCVC*AWVLVS
Trigger: GGACACCAGGACCCAAGCCCAGCAGACACAGGATCT...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTTAAAGTCGTCATCACTGTCTaGGAGGCGATAGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CPAGLRPGSRSLLCRDVKVVITV*EAIVLE
Trigger: CTCCAGGACTATCGCCTCCCAGACAGTGATGACGAC...TTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp TCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTTATGCTGCAGGACTCTTTaGATGGCTGTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SAPRGCVQGREACSAGMLCCRTL*MAVSSS
Trigger: GGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCA...TAACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp CTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCCCTCAGCCTCAGGCCTaGGGTCCACATCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LEWRIFPHSRDTKAQEGAPQPQA*GPHPGP
Trigger: AGGCCCAGGATGTGGACCCCAGGCCTGAGGCTGAGG...GGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCACCTCAGCCTCAGGCCTaGGGTCCACATCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPPQPQA*GPHPGP
Trigger: AGGCCCAGGATGTGGACCCCAGGCCTGAGGCTGAGG...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp TCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAGCTCAAAGGCATCATaGCCCTCTCGGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SSVEPDKLSHRTSCGWAQSSKAS*PSRKQR
Trigger: CCGCTGCTTCCGAGAGGGCCATGATGCCTTTGAGCT...CTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp ATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTGGGTGCCGCTGCCTGTaGGACTGCCCTTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: IGGPRLLPSQSFSRMENLGCRCL*DCPSGR
Trigger: CCTCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCC...AAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGGCTGGGCCCAGAAATaGGTGCCGCTGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SGRGLSIISRARQALPSDGWAQK*VPLPVG
Trigger: TCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCC...GTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGGCTGGGCCCAGAAATaGGTGCCGCTGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWGWAQK*VPLPVG
Trigger: TCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCC...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACGCCTCGGCCACTGCTaGCATCCGCTCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: FQGHQGSGRGLSIISRARRLGHC*HPLSRF
Trigger: GAACCTGGAGAGCGGATGCCAGCAGTGGCCGAGGCG...TCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGCGCCTCGGCCACTGCTaGCATCCGCTCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWRLGHC*HPLSRF
Trigger: GAACCTGGAGAGCGGATGCCAGCAGTGGCCGAGGCG...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAAAGTCAGCCTTCACCATaGTGCCCCGGAAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKSQPSP*CPGSRR
Trigger: CCTCCTGCTTCCGGGGCACCATGGTGAAGGCTGACT...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336455.9
CDS-3UTR CCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGCATGGCTAGTCGCTTaGCCAGGGCCAGAATCCGTT +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWAWLVA*PGPESV
Trigger: AACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGC...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACCTGTCCCCGCAGCATaGCTAGTCGCTTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FQGHQGSGRGLSIISRARPVPAA*LVAWPG
Trigger: CCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGG...TCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCTTGCAGACTCCTGTCCCCGCAGCATaGCTAGTCGCTTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EALAEDPLVRTSWHCLQTPVPAA*LVAWPG
Trigger: CCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGG...AGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCGCCGTATCTCCATGGTaGCTCCCAGCACCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVAVSPW*LPAPQG
Trigger: ACCCTGCGGTGCTGGGAGCCACCATGGAGATACGGC...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561768.5
3UTR CAA 72 bp GCCAGCAGTCTGCTCTTCTCCTCCTCCAAGGACCAGTaGGCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ASSLLFSSSKDQ*ACLLELVLPGP
Trigger: TGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGAGGAGAAGAGCAGACTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR TCA 90 bp CTCCCTGGGCCACCCTGGTTGAGATCATTCTGGAGAGAGGCAGCTGGGCCTCCTGAAGGGATGGAACCCTaGCGTTCATCCTTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPGPPWLRSFWREAAGPPEGMEP*RSSFRA
Trigger: TGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTC...AGGAGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR TCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTCAGCGGACAAAGAGGTaGGAACGGTGGCGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCQRTKR*ERWRGR
Trigger: CCTTCCTCGCCACCGTTCTCACCTCTTTGTCCGCTG...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TGCTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCACTGAAGCAGCACCGCAGGGTCTaGAGAGCTGAGATCACGCCG +
Preference number: 4 (lower is better)
Translates to: CLQTFCWVFPVRGTAALKQHRRV*RAEITP
Trigger: CGGCGTGATCTCAGCTCTGCAGACCCTGCGGTGCTG...CTTCAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR GCA 90 bp TCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGGAAGTGCTGGGCTTTTaGTTGGCTTCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSVEPDKLSHRTSCGWAQEVLGF*LASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTC...CTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CGTCATCACTGTCTGGGAGGCGATAGTCCTGGAGGGTCACTCTCTCGGGGTCCTCCTGGCTCTGGGAAGTaGTGGGCTTTTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RHHCLGGDSPGGSLSRGPPGSGK*WAFAWL
Trigger: AAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGG...AGGACCCCGAGAGAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp TCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGCAACGCTGCAAGTCGTaGCTCCATTTCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSVEPDKLSHRTSCGWAQQRCKS*LHFLGG
Trigger: TCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTG...CTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGGTAGAACTCTGCCCTaGAACGCTGCAAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: IISRARQALPSDVLWLGPGRTLP*NAASRA
Trigger: GGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTGACGGTAGAACTCTGCCCTaGAACGCTGCAAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: ATLQVVPPFPGWKGWNPDGRTLP*NAASRA
Trigger: GGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC...GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTGACGGGTAGAACTCTGCCCTaGAACGCTGCAAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: QRCKSCLHFLGGRDGTLTGRTLP*NAASRA
Trigger: GGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC...CGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR GCA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAAGCAGATCCTGTGTCTaGTGGGCTTGGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: IISRARQALPSDVLWLGPSRSCV*WAWVLV
Trigger: CACCAGGACCCAAGCCCAGCAGACACAGGATCTGCT...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CACAACTGTGCTTACAGCCTGCTCTGTTCCTGCCACCTCTCACAGGGCCCAGGCACCTCAGCTGCCAGCTaGGTTAGCAGATCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: HNCAYSLLCSCHLSQGPGTSAAS*VSRSCV
Trigger: GACACAGGATCTGCTAACGCAGCTGGCAGCTGAGGT...GCCTGGGCCCTGTGAGAGGTGGCAGGAACAGAGCAGGCTGTAAGCACAGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR GCA 90 bp GGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCGGGTGGCATCCTCATTaGAGATGCAGCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GAQQSSGLVVSVPGSGKCGWHPH*RCSTRG
Trigger: TCCCCTGGTGCTGCATCTGCAATGAGGATGCCACCC...GCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGGGTGGCATCCTCATTaGAGATGCAGCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: IISRARQALPSDVLWLGPGWHPH*RCSTRG
Trigger: TCCCCTGGTGCTGCATCTGCAATGAGGATGCCACCC...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGAGAAATGGGTGCCGCTaGCTGTGGGACTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWRNGCR*LWDCPS
Trigger: GGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCT...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp AGGGGTCCGGTTAGGGCGCATTACTGGAAGAGAGATACTGAGACTGAATGGCAGGGGCCCAGAAATGGGTaGCGCTGCCTGTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: RGPVRAHYWKRDTETEWQGPRNG*RCLWDC
Trigger: GCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCC...CTGCCATTCAGTCTCAGTATCTCTCTTCCAGTAATGCGCCCTAACCGGACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR GCA 90 bp TTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAGGGGAGGGGCCTGTaGCCTAGAGCCAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: FQGHQGSGRGLSIISRARQGRGL*PRARLQ
Trigger: CTGTAACCTGGCTCTAGGGCACAGGCCCCTCCCCTG...TCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp TGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCCCTCAGCCAGCAGTCTaGTCTTCTCCTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: CPRARLQGSPVDSVWSLPPQPAV*SSPPPR
Trigger: CCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGG...GGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTGACCCGCAACTCAAGTGCTaGCTCAGCCAGCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ATLQVVPPFPGWKGWNPDPQLKC*LSQQSA
Trigger: AGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGG...GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCCTCCCGCAACTCAAGTaGTGCCTCAGCCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GAQQSSGLVVSVPGSGKCLPQLK*CLSQQS
Trigger: AGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAG...GCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp TTCCCCCATTCCCCACAACTGTGCTTACAGCCTGCTCTGTTCCTGCCACCTCTCGCCAGAATCCGTTCCTaGCTCGTGTTCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: FPHSPQLCLQPALFLPPLARIRS*LVFSSR
Trigger: GCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGC...GAGAGGTGGCAGGAACAGAGCAGGCTGTAAGCACAGTTGTGGGGAATGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR GCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGCCAGAATCCGTTCCTaGCTCGTGTTCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCARIRS*LVFSSR
Trigger: GCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGC...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp AGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGCGCGCCGGGTGGCTGTaGTCTCCCCGTGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SHSLEWRIFPHSRDTKAQRAGWL*SPRGPC
Trigger: ACAGGGGCCACGGGGAGAGCACAGCCACCCGGCGCG...CTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp GCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCTAGCACCTACTCTCCATaGTGGCTCCCAGCACCGCAG +
Preference number: 4 (lower is better)
Translates to: ALSNHLVLSCQSLALGSASTYSP*WLPAPQ
Trigger: CTGCGGTGCTGGGAGCCACCATGGAGAGTAGGTGCT...AGCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCACCACTTGGAGGCATTaGCAGAAGACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ACEGTNLGLFSWRSRARRTTWRH*QKTLWS
Trigger: TGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGT...GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CCA 90 bp CCTGGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: PGWKGWNPDVHPLGQPAVEVVTT*RHWQKT
Trigger: GGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTC...CACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCTTGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ALSNHLVLSCQSLALGSACRVSP*LWEVLG
Trigger: GCCCAGCACTTCCCAGAGCCAGGGACTGACACGACA...AGCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLTWACSPGGVVLGAQQSCRVSP*LWEVLG
Trigger: GCCCAGCACTTCCCAGAGCCAGGGACTGACACGACA...TGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVLGLFS*RSRARR
Trigger: GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAA...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCLGLFS*RSRARR
Trigger: GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAA...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGAGGGGACTAACTTaGGCTTGTTCTCCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWVRGLT*ACSPGG
Trigger: TCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAACGTGCCTCCATTTCCTaGGTGGAAGGGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: ISRARQALPSDVLWLGPERASIS*VEGMEP
Trigger: GGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACG...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCTGTGTCTGCTGGGCTTaGGTCCTGGTGTCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVCVCWA*VLVSGV
Trigger: CACACCGGACACCAGGACCCAAGCCCAGCAGACACA...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGGCAGGACTCTTTGGATaGCTGTCTCCTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVAGLFG*LSPHPR
Trigger: ACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGC...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGTGCTGCAGGACTCTTTaGATGGCTGTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVCCRTL*MAVSSS
Trigger: GGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCA...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAACAGCGCAGCGTAGGGTaGCATCCTCATTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: ISRARQALPSDVLWLGPEQRSVG*HPHCRC
Trigger: GCATCTGCAATGAGGATGCCACCCTACGCTGCGCTG...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCCAGCGCAGCGTAGGGTaGCATCCTCATTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GAQQSSGLVVSVPGSGKCQRSVG*HPHCRC
Trigger: GCATCTGCAATGAGGATGCCACCCTACGCTGCGCTG...GCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp CCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTAGCTCAAAGGCATCATaGCCCTCTCGGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PATLQVVPPFPGWKGWNPSSKAS*PSRKQR
Trigger: CCGCTGCTTCCGAGAGGGCCATGATGCCTTTGAGCT...AGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CCA 90 bp TCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGCTCTTGGCCTGCACGTaGAGGAGAGTAGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: SSVEPDKLSHRTSCGWAQLLACT*RRVGRC
Trigger: ACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAG...CTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGTGTCTTCAGTGCTCTTaGCCTGCACGTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWCLQCS*PARGGE
Trigger: CTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACA...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWPSDVL*LGPEMG
Trigger: ACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGG...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTCCCTGGGCCACCCTGGTTGAGATCATTCTGGAGAGAGGCAGCTGGGCCTCCTCTCTCACTTCCAGTCTaGGCTTCTAATAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPGPPWLRSFWREAAGPPLSLPV*ASNRRA
Trigger: GGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG...AGGAGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CCA 90 bp TCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGCGCCTCGGCCACTGCTaGCATCCGCTCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SFLIPGTPRLRKGPIHHQRLGHC*HPLSRF
Trigger: GAACCTGGAGAGCGGATGCCAGCAGTGGCCGAGGCG...CTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp TCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGCTCCCTGGGCCACCCTaGTTGAGATCATTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSVEPDKLSHRTSCGWAQLPGPP*LRSFWR
Trigger: TCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAG...CTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAGCATGGCTAGTCGCTTaGCCAGGGCCAGAATCCGTT +
Preference number: 4 (lower is better)
Translates to: ISRARQALPSDVLWLGPEAWLVA*PGPESV
Trigger: AACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGC...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCACCTGTCCCCGCAGCATaGCTAGTCGCTTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WRIFPHSRDTKAQEGAYPPVPAA*LVAWPG
Trigger: CCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGG...TGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR TCA 90 bp GTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGGAGGCACTGCTGCACTaGAGCTTAGGCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: VWASNRRAPTSSLPVILSEALLH*SLGSLN
Trigger: GTTCAGGCTGCCTAAGCTTCAGTGCAGCAGTGCCTC...CGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR TCA 90 bp GTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: VRGLTWACSPGGVVLGAQIVLRW*PLGGIG
Trigger: GCCAATGCCTCCAAGTGGTCACCACCTCAGAACTAT...CTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR TCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWIVLRW*PLGGIG
Trigger: GCCAATGCCTCCAAGTGGTCACCACCTCAGAACTAT...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR TCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCACAGCGGACAAAGAGGTaGGAACGGTGGCGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPQRTKR*ERWRGR
Trigger: CCTTCCTCGCCACCGTTCTCACCTCTTTGTCCGCTG...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR TCA 90 bp TCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTACTGGGCCACCCTGGTTaGGATCATTCTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SLPVRGLTWACSPGGVVLLGHPG*DHSGER
Trigger: CCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAG...TAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR TCA 90 bp CAGCCAGCCGTGCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCTGGGCCACCCTGGTTaGGATCATTCTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: QPAVPLSLPVRGLTWACSLGHPG*DHSGER
Trigger: CCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAG...AGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACGGCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR TCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCACCCTGGTTaGGATCATTCTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWLGHPG*DHSGER
Trigger: CCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAG...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR TCA 90 bp AGCCGTGCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGGAGGCACTGCTGCACTaGAGCTTAGGCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SRASISACEGTNLGLFSWEALLH*SLGSLL
Trigger: AAGGAGGCTGCCTAAGCTTCAGTGCAGCAGTGCCTC...CCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567756.5
CDS-3UTR GCA 90 bp AGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGTTCCCTTCCCTGCCCTaGCCCGCCCCACACGCCCAC +
Preference number: 4 (lower is better)
Translates to: SHSLEWRIFPHSRDTKAQFPSLP*PAPHAH
Trigger: GTGGGCGTGTGGGGCGGGGCAGGGCAGGGAAGGGAA...CTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS-3UTR GCA 90 bp GGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCAGCACCGCAGGGTCTaGAGAGCTGAGATCACGCCG +
Preference number: 4 (lower is better)
Translates to: GESFLIPGTPRLRKGPIHQHRRV*RAEITP
Trigger: CGGCGTGATCTCAGCTCTGCAGACCCTGCGGTGCTG...ATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000355341.8
ENST00000561768.5
CDS-3UTR GCA 90 bp GCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCCTGAACAGAAGGCCCTaGCACAATTCTTACAGCCGT +
Preference number: 4 (lower is better)
Translates to: ACEGTNLGLFSWRSRARRLNRRP*HNSYSR
Trigger: ACGGCTGTAAGAATTGTGGCAGGGCCTTCTGTTCAG...GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000568062.5
CDS-3UTR GCA 90 bp TGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCGAAGTGCTGGGCTTTTaGTTGGCTTCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CPRARLQGSPVDSVWSLPEVLGF*LASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTC...GGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp AGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAAGAAGTGCTGGGCTTTTaGTTGGCTTCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGLTWACSPGGVVLGAQQEVLGF*LASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTC...TTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR GCA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAACCTGGCTCTGGGAAGTaGTGGGCTTTTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKPGSGK*WAFAWL
Trigger: AAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGG...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTGGCTCTGGGAAGTaGTGGGCTTTTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CPATLQVVPPFPGWKGWNPGSGK*WAFAWL
Trigger: AAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGG...GTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTCAACGCTGCAAGTCGTaGCTCCATTTCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PATLQVVPPFPGWKGWNPQRCKS*LHFLGG
Trigger: TCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTG...AGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGCAACGCTGCAAGTCGTaGCTCCATTTCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RARRSAIIWSCRVSPWLWQRCKS*LHFLGG
Trigger: TCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTG...CCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR GCA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCATCTGCCCTGCAACGCTaGAAGTCGTGCCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: IISRARQALPSDVLWLGPSALQR*KSCLHF
Trigger: GAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGA...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATCTGCCCTGCAACGCTaGAAGTCGTGCCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKSALQR*KSCLHF
Trigger: GAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGA...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCGGTAGAACTCTGCCCTaGAACGCTGCAAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSGRTLP*NAASRA
Trigger: GGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCGGTAGAACTCTGCCCTaGAACGCTGCAAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVGRTLP*NAASRA
Trigger: GGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGTAGAACTCTGCCCTaGAACGCTGCAAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCGRTLP*NAASRA
Trigger: GGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGAGAAGGTAGAACTCTaGCCTGCAACGCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWEKVEL*PATLQV
Trigger: GACTTGCAGCGTTGCAGGGCAGAGTTCTACCTTCTC...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCAGCAGATCCTGTGTCTaGTGGGCTTGGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSSRSCV*WAWVLV
Trigger: CACCAGGACCCAAGCCCAGCAGACACAGGATCTGCT...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAACCTCAGCTGCCAGCTaGGTTAGCAGATCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: IISRARQALPSDVLWLGPTSAAS*VSRSCV
Trigger: GACACAGGATCTGCTAACGCAGCTGGCAGCTGAGGT...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GTCATCACTGTCTGGGAGGCGATAGTCCTGGAGGGTCACTCTCTCGGGGTCCTGCAGGGTCGAGAAGCCTaGTCTGCAGGGATGTTAAAG +
Preference number: 4 (lower is better)
Translates to: VITVWEAIVLEGHSLGVLQGREA*SAGMLK
Trigger: CTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTG...CAGGACCCCGAGAGAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CCTGGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGCAGGGTCGAGAAGCCTaGTCTGCAGGGATGTTAAAG +
Preference number: 4 (lower is better)
Translates to: PGWKGWNPDVHPLGQPAVQGREA*SAGMLK
Trigger: CTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTG...CACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTTCAGTGCTCTTGGCCTaGACGTGGAGGAGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCSVLLA*TWRRVG
Trigger: GCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGA...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGTCAGTGCTCTTGGCCTaGACGTGGAGGAGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWSVLLA*TWRRVG
Trigger: GCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGA...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CGAGAAGCCTGCTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCAGGGAAGCTAGAAATGGGTGCCGCTaGCTGTGGGACTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: REACSAGMLKPLASSREARNGCR*LWDCPS
Trigger: GGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCT...AGCTTCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR GCA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAAGGTCTCTCCCCATCATaGCTCTCACTTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKGLSPS*LSLPVW
Trigger: CCAGACTGGAAGTGAGAGGCATGATGGGGAGAGACC...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCATTAGACCCACTAAGTaGCAGGGGAGGGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSIRPTK*QGRGLC
Trigger: GCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAAT...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCCGCAACTCAAGTGCTaGCTCAGCCAGCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWPQLKC*LSQQSA
Trigger: AGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGG...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTCCGCAACTCAAGTGCTaGCTCAGCCAGCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCPQLKC*LSQQSA
Trigger: AGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGG...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTACTCCCGCAACTCAAGTaGTGCCTCAGCCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SLPVRGLTWACSPGGVVLLPQLK*CLSQQS
Trigger: AGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAG...TAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTCTCCCGCAACTCAAGTaGTGCCTCAGCCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCLPQLK*CLSQQS
Trigger: AGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAG...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCGCCAGAATCCGTTCCTaGCTCGTGTTCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: HQGSGRGLSIISRARQALARIRS*LVFSSR
Trigger: GCGGGAGGAGAACACGAGGCAGGAACGGATTCTGGC...GAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGTTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SSVEPDKLSHRTSCGWAQLQTFC*VFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAA...CTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCTTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LPVRGLTWACSPGGVVLGLQTFC*VFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAA...GCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CCA 90 bp AATCCGTTCCTGCCTCGTGTTCTCCTCCCGCAACTCAAGTGCTGCCTCAGCCAGGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: NPFLPRVLLPQLKCCLSQEVVTT*RHWQKT
Trigger: GGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTC...CTGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAGGAACGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: IISRARQALPSDVLWLGPEVVTT*RHWQKT
Trigger: GGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTC...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SLPVRGLTWACSPGGVVLVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...TAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp TCAAGTGCTGCCTCAGCCAGCAGTCTGCTCTTCTCCTCCTCCAAGGACCAGTTGGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SSAASASSLLFSSSKDQLVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...CAACTGGTCCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGGCAGCACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGTGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSIISRARQALPSDVLWLCRVSP*LWEVLG
Trigger: GCCCAGCACTTCCCAGAGCCAGGGACTGACACGACA...CAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CCTCCATTTCCTGGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: PPFPGWKGWNPDVHPLGQLGLFS*RSRARR
Trigger: GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAA...CTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GGCCTGTGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: GLCPRARLQGSPVDSVWSPGWKG*NPDVHP
Trigger: AGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG...AGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GAACTCTGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGACCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: ELCPATLQVVPPFPGWKGPPFPG*KGWNPD
Trigger: GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG...TCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR CCA 90 bp TCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTACGTGCCTCCATTTCCTaGGTGGAAGGGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: SLPVRGLTWACSPGGVVLRASIS*VEGMEP
Trigger: GGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACG...TAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCACGTGCCTCCATTTCCTaGGTGGAAGGGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: GLTWACSPGGVVLGAQQSRASIS*VEGMEP
Trigger: GGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACG...TGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR CCA 90 bp CTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTGTGTCTGCTGGGCTTaGGTCCTGGTGTCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LEWRIFPHSRDTKAQEGACVCWA*VLVSGV
Trigger: CACACCGGACACCAGGACCCAAGCCCAGCAGACACA...GGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCTAGATCCTGTGTCTGCTaGGCTTGGGTCCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ALSNHLVLSCQSLALGSARSCVC*AWVLVS
Trigger: GGACACCAGGACCCAAGCCCAGCAGACACAGGATCT...AGCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCAAGATCCTGTGTCTGCTaGGCTTGGGTCCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GLTWACSPGGVVLGAQQSRSCVC*AWVLVS
Trigger: GGACACCAGGACCCAAGCCCAGCAGACACAGGATCT...TGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCAGATCCTGTGTCTGCTaGGCTTGGGTCCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGRSCVC*AWVLVS
Trigger: GGACACCAGGACCCAAGCCCAGCAGACACAGGATCT...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCGTCCTGGAGGGTCACTaGGCCTCCTCCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LEWRIFPHSRDTKAQEGAVLEGH*ASSFPA
Trigger: AGCTGGAAAGGAGGAGGCCCAGTGACCCTCCAGGAC...GGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299173.14
CDS-3UTR CCA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGTCGTCATCACTGTCTaGGAGGCGATAGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: IISRARQALPSDVLWLGPVVITV*EAIVLE
Trigger: CTCCAGGACTATCGCCTCCCAGACAGTGATGACGAC...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTCCAAGGACCAGTTGGCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCCTGGCAGGACTCTTTGGATaGCTGTCTCCTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: LQGPVGLPLGISAPWATLAGLFG*LSPHPR
Trigger: ACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGC...CAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGAGGGTGCCGCTGCCTGTaGGACTGCCCTTCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGGCRCL*DCPSGR
Trigger: CCTCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCC...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: LPVWASNRRAPTSSLPVIPSDVL*LGPEMG
Trigger: ACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGG...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTGGTTCATTCGGGTCCTaGGCGGGGAGCGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: APTSSLPVILSNGESFLIGSFGS*AGSEGR
Trigger: CCGACCCTCGCTCCCCGCCCAGGACCCGAATGAACC...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp ACTCTGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGCTCCCTGGGCCACCCTaGTTGAGATCATTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TLPCNAASRASISWVEGMLPGPP*LRSFWR
Trigger: TCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAG...CATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAACTCCCTGGGCCACCCTaGTTGAGATCATTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKLPGPP*LRSFWR
Trigger: TCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAG...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAAGGAATTAGTGCTCCCTaGGCCACCCTGGTTGAGATC +
Preference number: 4 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKGISAP*ATLVEI
Trigger: GATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCC...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCGCATGGCTAGTCGCTTaGCCAGGGCCAGAATCCGTT +
Preference number: 4 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVAWLVA*PGPESV
Trigger: AACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGC...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp ACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTGCATGGCTAGTCGCTTaGCCAGGGCCAGAATCCGTT +
Preference number: 4 (lower is better)
Translates to: TWACSPGGVVLGAQQSSGAWLVA*PGPESV
Trigger: AACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGC...ACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCCTCCCAGACATTTCCTaGACGGTCCGAGGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGLPDIS*TVRGPQ
Trigger: TTGAGGCCCTCGGACCGTCCAGGAAATGTCTGGGAG...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTCCCAGACATTTCCTaGACGGTCCGAGGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWLPDIS*TVRGPQ
Trigger: TTGAGGCCCTCGGACCGTCCAGGAAATGTCTGGGAG...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTCTCCCAGACATTTCCTaGACGGTCCGAGGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCLPDIS*TVRGPQ
Trigger: TTGAGGCCCTCGGACCGTCCAGGAAATGTCTGGGAG...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR TCA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTGAGGCACTGCTGCACTaGAGCTTAGGCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LPVWASNRRAPTSSLPVIEALLH*SLGSLN
Trigger: GTTCAGGCTGCCTAAGCTTCAGTGCAGCAGTGCCTC...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR TCA 90 bp CTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCGAGGCACTGCTGCACTaGAGCTTAGGCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LEWRIFPHSRDTKAQEGAEALLH*SLGSLN
Trigger: GTTCAGGCTGCCTAAGCTTCAGTGCAGCAGTGCCTC...GGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR TCA 90 bp CATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGAGGCACTGCTGCACTaGAGCTTAGGCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: HSRDTKAQEGAYPSSVEPEALLH*SLGSLN
Trigger: GTTCAGGCTGCCTAAGCTTCAGTGCAGCAGTGCCTC...TGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR TCA 90 bp TGCTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCACTGAAGGAGGCACTGCTGCACTaGAGCTTAGGCAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: CLQTFCWVFPVRGTAALKEALLH*SLGSLN
Trigger: GTTCAGGCTGCCTAAGCTTCAGTGCAGCAGTGCCTC...CTTCAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000568062.5
CDS-3UTR TCA 90 bp GGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: GVVLGAQQSSGLVVSVPGIVLRW*PLGGIG
Trigger: GCCAATGCCTCCAAGTGGTCACCACCTCAGAACTAT...GCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR TCA 90 bp CGTGCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: RASISACEGTNLGLFSWRIVLRW*PLGGIG
Trigger: GCCAATGCCTCCAAGTGGTCACCACCTCAGAACTAT...CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR TCA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAGAAGGGATGGAACCCTaGCGTTCATCCTTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: ISRARQALPSDVLWLGPEEGMEP*RSSFRA
Trigger: TGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTC...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR TCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCAGCGGACAAAGAGGTaGGAACGGTGGCGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALEQRTKR*ERWRGR
Trigger: CCTTCCTCGCCACCGTTCTCACCTCTTTGTCCGCTG...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR TCA 90 bp TCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGACTGGGCCACCCTGGTTaGGATCATTCTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SGLLIGGPRLLPSQSFSRLGHPG*DHSGER
Trigger: CCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAG...TCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGCTTGGCTTCCAAGGCTaGCACACGCTTCTTATAGTT +
Preference number: 4 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVLGFQG*HTLLIV
Trigger: AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAG...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGAAGTGCTGGGCTTTTaGTTGGCTTCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLPVRGLTWACSPGGVVLEVLGF*LASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTC...TAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCCTGGTTGAGATCATTCTGGGAAGTGCTGGGCTTTTaGTTGGCTTCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ACLLELVLPGPPWLRSFWEVLGF*LASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTC...CCAGAATGATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCCTGGCTCTGGGAAGTaGTGGGCTTTTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWPGSGK*WAFAWL
Trigger: AAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGG...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACCCTGGCTCTGGGAAGTaGTGGGCTTTTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SRDTKAQEGAYPSSVEPDPGSGK*WAFAWL
Trigger: AAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGG...GTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGCCTGGCTCTGGGAAGTaGTGGGCTTTTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VWASNRRAPTSSLPVILSPGSGK*WAFAWL
Trigger: AAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGG...CGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCCTGGCTCTGGGAAGTaGTGGGCTTTTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GLFSWRSRARRSAIIWSCPGSGK*WAFAWL
Trigger: AAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGG...ACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCCAACGCTGCAAGTCGTaGCTCCATTTCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSQRCKS*LHFLGG
Trigger: TCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTG...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTACAACGCTGCAAGTCGTaGCTCCATTTCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SLPVRGLTWACSPGGVVLQRCKS*LHFLGG
Trigger: TCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTG...TAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCAACGCTGCAAGTCGTaGCTCCATTTCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWQRCKS*LHFLGG
Trigger: TCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTG...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CTCTCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCATCTGCCCTGCAACGCTaGAAGTCGTGCCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: LSLPVWASNRRAPTSSLPSALQR*KSCLHF
Trigger: GAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGA...TGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTTCTGCCCTGCAACGCTaGAAGTCGTGCCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: GLFSWRSRARRSAIIWSCSALQR*KSCLHF
Trigger: GAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGA...ACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GACCACTTGGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCTCTGCCCTGCAACGCTaGAAGTCGTGCCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: DHLEALAEDPLVRTSWHCSALQR*KSCLHF
Trigger: GAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGA...GCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
CDS-3UTR GCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGGTAGAACTCTGCCCTaGAACGCTGCAAGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWGRTLP*NAASRA
Trigger: GGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACC...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACGAGAAGGTAGAACTCTaGCCTGCAACGCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: CPATLQVVPPFPGWKGWNEKVEL*PATLQV
Trigger: GACTTGCAGCGTTGCAGGGCAGAGTTCTACCTTCTC...GTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTGAGAAGGTAGAACTCTaGCCTGCAACGCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: PATLQVVPPFPGWKGWNPEKVEL*PATLQV
Trigger: GACTTGCAGCGTTGCAGGGCAGAGTTCTACCTTCTC...AGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTACCTCAGCTGCCAGCTaGGTTAGCAGATCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCTSAAS*VSRSCV
Trigger: GACACAGGATCTGCTAACGCAGCTGGCAGCTGAGGT...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GTCTTCAGTGCTCTTGGCCTGCACGTGGAGGAGAGTAGGCAGATGTCTGGTGCTACCTCAGCTGCCAGCTaGGTTAGCAGATCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VFSALGLHVEESRQMSGATSAAS*VSRSCV
Trigger: GACACAGGATCTGCTAACGCAGCTGGCAGCTGAGGT...AGCACCAGACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR GCA 90 bp ACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTACCTCAGCTGCCAGCTaGGTTAGCAGATCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TWACSPGGVVLGAQQSSGTSAAS*VSRSCV
Trigger: GACACAGGATCTGCTAACGCAGCTGGCAGCTGAGGT...ACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGTCTTCAGTGAGCTGCTaGAGGACTCTTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWSSVSC*RTLWMA
Trigger: AGCCATCCAAAGAGTCCTGCAGCAGCTCACTGAAGA...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGGCTTCTTCAGTGAGCTaGTGCAGGACTCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: SSVEPDKLSHRTSCGWAQASSVS*CRTLWM
Trigger: CATCCAAAGAGTCCTGCAGCAGCTCACTGAAGAAGC...CTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CCAATGAATCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTTCTGCCCCGCGGGGTTaGGTCCAGGGTCGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PMNQHTLLDPLSARGGACSAPRG*VQGREA
Trigger: GGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGA...ACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGATTCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
CDS-3UTR GCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCCATCCTCATTGCAGATaGAGCACCAGGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVHPHCR*STRGAP
Trigger: AGGAGCTCCCCTGGTGCTGCATCTGCAATGAGGATG...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCATCCTCATTGCAGATaGAGCACCAGGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLFSWRSRARRSAIIWSCHPHCR*STRGAP
Trigger: AGGAGCTCCCCTGGTGCTGCATCTGCAATGAGGATG...ACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp TCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGGGTGGCATCCTCATTaGAGATGCAGCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SGRGLSIISRARQALPSDGWHPH*RCSTRG
Trigger: TCCCCTGGTGCTGCATCTGCAATGAGGATGCCACCC...GTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGAGGGTGGCATCCTCATTaGAGATGCAGCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: FQGHQGSGRGLSIISRARGWHPH*RCSTRG
Trigger: TCCCCTGGTGCTGCATCTGCAATGAGGATGCCACCC...TCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACTCAGTGCTCTTGGCCTaGACGTGGAGGAGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SGRGLSIISRARQALPSDSVLLA*TWRRVG
Trigger: GCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGA...GTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCATCAGTGCTCTTGGCCTaGACGTGGAGGAGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPSVLLA*TWRRVG
Trigger: GCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGA...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGAGAAATGGGTGCCGCTaGCTGTGGGACTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALERNGCR*LWDCPS
Trigger: GGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCT...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGTCTCTCCCCATCATaGCTCTCACTTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCGLSPS*LSLPVW
Trigger: CCAGACTGGAAGTGAGAGGCATGATGGGGAGAGACC...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACATTAGACCCACTAAGTaGCAGGGGAGGGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SGRGLSIISRARQALPSDIRPTK*QGRGLC
Trigger: GCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAAT...GTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp TCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGCAGCCTTCACCATGGTaGCCCGGAAGCAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SFLIPGTPRLRKGPIHHQQPSPW*PGSRRK
Trigger: CTTCCTCCTGCTTCCGGGGCACCATGGTGAAGGCTG...CTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336455.9
CDS-3UTR GCA 90 bp CTCCTCCAAGGACCAGTTGGCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCAAGGACCAGTTGGCCTaGCTCTTGGAATTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLQGPVGLPLGISAPWATKDQLA*LLELVL
Trigger: GAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTT...GGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGCCTCAGCCAGCAGTCTaGTCTTCTCCTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWPQPAV*SSPPPR
Trigger: CCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGG...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCACTGAAGCTCCTCAGCCAGCAGTCTaGTCTTCTCCTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LADFLLGVPSPRHCCTEAPQPAV*SSPPPR
Trigger: CCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGG...AGCTTCAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR GCA 90 bp GGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATAGCCTGCTCTGTTCCTaGCACCTCTCACAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GESFLIPGTPRLRKGPIHSLLCS*HLSQGP
Trigger: TGGGCCCTGTGAGAGGTGGCAGGAACAGAGCAGGCT...ATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR GCA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAACTGTGCTTACAGCCTaGTCTGTTCCTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: ISRARQALPSDVLWLGPETVLTA*SVPATS
Trigger: AGAGGTGGCAGGAACAGAGCAGGCTGTAAGCACAGT...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp ACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACGCCGGCCAAGTCCTaGGCCCCTTGGACCCTCACC +
Preference number: 4 (lower is better)
Translates to: TSSLPVILSNGESFLIPGTPAKS*APWTLT
Trigger: GGTGAGGGTCCAAGGGGCCCAGGACTTGGCCGGCGT...CCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS-3UTR CCA 90 bp CAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTGACGTTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: QRCKSCLHFLGGRDGTLTLQTFC*VFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAA...CGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
CDS-3UTR CCA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKLQTFC*VFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAA...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAATGGCAGAAGACCCTCTaGTCAGGACCTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: ISRARQALPSDVLWLGPEWQKTL*SGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCA...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp ACTCTGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGTGGCAGAAGACCCTCTaGTCAGGACCTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: TLPCNAASRASISWVEGMWQKTL*SGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCA...CATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
CDS-3UTR CCA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAACCACTTGGAGGCATTaGCAGAAGACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ISRARQALPSDVLWLGPETTWRH*QKTLWS
Trigger: TGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGT...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: SWRSRARRSAIIWSCRVSEVVTT*RHWQKT
Trigger: GGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTC...ACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp CATTGCTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCACTGGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: HCLQTFCWVFPVRGTAALVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...CAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CCA 90 bp GGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATTGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GESFLIPGTPRLRKGPIHCRVSP*LWEVLG
Trigger: GCCCAGCACTTCCCAGAGCCAGGGACTGACACGACA...ATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SFLIPGTPRLRKGPIHHQCRVSP*LWEVLG
Trigger: GCCCAGCACTTCCCAGAGCCAGGGACTGACACGACA...CTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCTTGCAGACTTTCTGTTGGTGTCGTGTCAGTCCCTaGCTCTGGGAAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AEDPLVRTSWHCLQTFCWCRVSP*LWEVLG
Trigger: GCCCAGCACTTCCCAGAGCCAGGGACTGACACGACA...CCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CCA 90 bp CGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGCGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: RARRSAIIWSCRVSPWLWRSAII*SCRVSP
Trigger: GGGACTGACACGACAAGACCAGATGATTGCTGAGCG...CCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGTGAGGGGACTAACTTaGGCTTGTTCTCCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCVRGLT*ACSPGG
Trigger: TCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTGTGAGGGGACTAACTTaGGCTTGTTCTCCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: SWRSRARRSAIIWSCRVSVRGLT*ACSPGG
Trigger: TCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC...ACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp CTCTCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCACCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: LSLPVWASNRRAPTSSLPPGWKG*NPDVHP
Trigger: AGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG...TGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTACCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: SLPVRGLTWACSPGGVVLPGWKG*NPDVHP
Trigger: AGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG...TAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR CCA 90 bp CAGCCAGCCGTGCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: QPAVPLSLPVRGLTWACSPGWKG*NPDVHP
Trigger: AGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG...AGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACGGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR CCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCCCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVPPFPG*KGWNPD
Trigger: GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAACCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: ARRSAIIWSCRVSPWLWEPPFPG*KGWNPD
Trigger: GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG...TTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR CCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGCGTGCCTCCATTTCCTaGGTGGAAGGGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWRASIS*VEGMEP
Trigger: GGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACG...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGTGTGTCTGCTGGGCTTaGGTCCTGGTGTCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALECVCWA*VLVSGV
Trigger: CACACCGGACACCAGGACCCAAGCCCAGCAGACACA...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCGTCGTCATCACTGTCTaGGAGGCGATAGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVVVITV*EAIVLE
Trigger: CTCCAGGACTATCGCCTCCCAGACAGTGATGACGAC...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTCTCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCGTCATCACTGTCTaGGAGGCGATAGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSLPVWASNRRAPTSSLPVVITV*EAIVLE
Trigger: CTCCAGGACTATCGCCTCCCAGACAGTGATGACGAC...TGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCGCAGGACTCTTTGGATaGCTGTCTCCTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: CPRARLQGSPVDSVWSLPAGLFG*LSPHPR
Trigger: ACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGC...GGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CGTGCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGGCAGGACTCTTTGGATaGCTGTCTCCTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: RASISACEGTNLGLFSWRAGLFG*LSPHPR
Trigger: ACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGC...CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCTCAGCCTCAGGCCTaGGGTCCACATCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: APTSSLPVILSNGESFLIPQPQA*GPHPGP
Trigger: AGGCCCAGGATGTGGACCCCAGGCCTGAGGCTGAGG...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCAGCGCAGCGTAGGGTaGCATCCTCATTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: HQGSGRGLSIISRARQALQRSVG*HPHCRC
Trigger: GCATCTGCAATGAGGATGCCACCCTACGCTGCGCTG...GAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGCAGCGCAGCGTAGGGTaGCATCCTCATTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWQRSVG*HPHCRC
Trigger: GCATCTGCAATGAGGATGCCACCCTACGCTGCGCTG...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCAGCTCAAAGGCATCATaGCCCTCTCGGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LEWRIFPHSRDTKAQEGASSKAS*PSRKQR
Trigger: CCGCTGCTTCCGAGAGGGCCATGATGCCTTTGAGCT...GGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACAGCTCAAAGGCATCATaGCCCTCTCGGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SGRGLSIISRARQALPSDSSKAS*PSRKQR
Trigger: CCGCTGCTTCCGAGAGGGCCATGATGCCTTTGAGCT...GTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTCTCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCACTCTTGGCCTGCACGTaGAGGAGAGTAGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: LSLPVWASNRRAPTSSLPLLACT*RRVGRC
Trigger: ACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAG...TGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GACCACTTGGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCCTCTTGGCCTGCACGTaGAGGAGAGTAGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: DHLEALAEDPLVRTSWHCLLACT*RRVGRC
Trigger: ACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAG...GCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTTGTCTTCAGTGCTCTTaGCCTGCACGTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCCLQCS*PARGGE
Trigger: CTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACA...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCCGGACGTCCTGTGGCTaGGCCCAGAAATGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: FPPSHSLEWRIFPHSRDTRTSCG*AQKWVP
Trigger: CGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCG...GGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAACGGACGTCCTGTGGCTaGGCCCAGAAATGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQRTSCG*AQKWVP
Trigger: CGGCACCCATTTCTGGGCCCAGCCACAGGACGTCCG...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCACCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: WRIFPHSRDTKAQEGAYPPSDVL*LGPEMG
Trigger: ACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGG...TGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGAAGTCATTCTCTCGAATaGAGAATCTTTCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: LWLGPEMGAAACGTALPGSHSLE*RIFPHS
Trigger: GGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCACTCTCACTTCCAGTCTaGGCTTCTAATAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: IISRARQALPSDVLWLGPLSLPV*ASNRRA
Trigger: GGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GGCCTGTGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCTCACTTCCAGTCTaGGCTTCTAATAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLCPRARLQGSPVDSVWSLSLPV*ASNRRA
Trigger: GGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG...AGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCCCCGTAGATTCAGTCTaGTCTCTCCCCATCATGCCT +
Preference number: 4 (lower is better)
Translates to: CPRARLQGSPVDSVWSLPPVDSV*SLPIMP
Trigger: AGGCATGATGGGGAGAGACCAGACTGAATCTACGGG...GGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCACTAACTCCAGCGACCTaGAGAAGGGCAGGCTGTACG +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPLTPAT*RRAGCT
Trigger: CGTACAGCCTGCCCTTCTCCAGGTCGCTGGAGTTAG...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336455.9
CDS-3UTR CCA 90 bp CGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGTGGTTGAGATCATTCTaGAGAGAGGCAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RARRSAIIWSCRVSPWLWWLRSF*REAAGP
Trigger: AGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCA...CCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCATGGTTGAGATCATTCTaGAGAGAGGCAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IISRARQALPSDVLWLGPWLRSF*REAAGP
Trigger: AGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCA...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCTGGTTGAGATCATTCTaGAGAGAGGCAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GAQQSSGLVVSVPGSGKCWLRSF*REAAGP
Trigger: AGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCA...GCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp CTCTCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCACTCCCTGGGCCACCCTaGTTGAGATCATTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLPVWASNRRAPTSSLPLPGPP*LRSFWR
Trigger: TCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAG...TGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCTGGAATTAGTGCTCCCTaGGCCACCCTGGTTGAGATC +
Preference number: 4 (lower is better)
Translates to: ALSNHLVLSCQSLALGSAGISAP*ATLVEI
Trigger: GATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCC...AGCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGCTGAGAAATCCAAGATaGTGGGGACTGGTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWLRNPR*WGLVAK
Trigger: CTTAGCCACCAGTCCCCACCATCTTGGATTTCTCAG...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR CAA 72 bp GCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: AEDPLVRTSWHC*QTFCWVFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR TCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWIVLRW*PLGGIG
Trigger: GCCAATGCCTCCAAGTGGTCACCACCTCAGAACTAT...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR TCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGIVLRW*PLGGIG
Trigger: GCCAATGCCTCCAAGTGGTCACCACCTCAGAACTAT...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR TCA 90 bp GACCACTTGGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: DHLEALAEDPLVRTSWHCIVLRW*PLGGIG
Trigger: GCCAATGCCTCCAAGTGGTCACCACCTCAGAACTAT...GCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR TCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCGAAGGGATGGAACCCTaGCGTTCATCCTTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGEGMEP*RSSFRA
Trigger: TGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTC...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR TCA 90 bp TGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCACTGGGCCACCCTGGTTaGGATCATTCTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: WRIFPHSRDTKAQEGAYPLGHPG*DHSGER
Trigger: CCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAG...TGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAACAGCACCGCAGGGTCTaGAGAGCTGAGATCACGCCG +
Preference number: 4 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQQHRRV*RAEITP
Trigger: CGGCGTGATCTCAGCTCTGCAGACCCTGCGGTGCTG...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000355341.8
ENST00000561768.5
CDS-3UTR GCA 90 bp TCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAGGACCTCATGGCATTaGTTGCAGACTTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSVEPDKLSHRTSCGWAQRTSWH*LQTFCW
Trigger: CCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCT...CTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCAGGACCTCATGGCATTaGTTGCAGACTTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: ALQRCKSCLHFLGGRDGTRTSWH*LQTFCW
Trigger: CCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCT...GGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
CDS-3UTR GCA 90 bp AGCATGGCTAGTCGCTTGGCCAGGGCCAGAATCCGTTCCTGCCTCGTGTTCTCCCTTGGCTTCCAAGGCTaGCACACGCTTCTTATAGTT +
Preference number: 4 (lower is better)
Translates to: SMASRLARARIRSCLVFSLGFQG*HTLLIV
Trigger: AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAG...GGAGAACACGAGGCAGGAACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGCCTCTTGGCTTCCAAGGCTaGCACACGCTTCTTATAGTT +
Preference number: 4 (lower is better)
Translates to: GWKGWNPDVHPLGQPAVPLGFQG*HTLLIV
Trigger: AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAG...AGGCACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCAGAAGTGCTGGGCTTTTaGTTGGCTTCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPEVLGF*LASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTC...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp CACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCAACGCTGCAAGTCGTaGCTCCATTTCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HQGSGRGLSIISRARQALQRCKS*LHFLGG
Trigger: TCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTG...GAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCATCTGCCCTGCAACGCTaGAAGTCGTGCCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPSALQR*KSCLHF
Trigger: GAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGA...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCGAGAAGGTAGAACTCTaGCCTGCAACGCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVEKVEL*PATLQV
Trigger: GACTTGCAGCGTTGCAGGGCAGAGTTCTACCTTCTC...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACGAGAAGGTAGAACTCTaGCCTGCAACGCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SRDTKAQEGAYPSSVEPDEKVEL*PATLQV
Trigger: GACTTGCAGCGTTGCAGGGCAGAGTTCTACCTTCTC...GTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCAAGCAGATCCTGTGTCTaGTGGGCTTGGGTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: WRIFPHSRDTKAQEGAYPSRSCV*WAWVLV
Trigger: CACCAGGACCCAAGCCCAGCAGACACAGGATCTGCT...TGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGACCTCAGCTGCCAGCTaGGTTAGCAGATCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWTSAAS*VSRSCV
Trigger: GACACAGGATCTGCTAACGCAGCTGGCAGCTGAGGT...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp ACTCTGCCCTGCAACGCTGCAAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGCTTCTTCAGTGAGCTaGTGCAGGACTCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: TLPCNAASRASISWVEGMASSVS*CRTLWM
Trigger: CATCCAAAGAGTCCTGCAGCAGCTCACTGAAGAAGC...CATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAGCTTCTTCAGTGAGCTaGTGCAGGACTCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: ISRARQALPSDVLWLGPEASSVS*CRTLWM
Trigger: CATCCAAAGAGTCCTGCAGCAGCTCACTGAAGAAGC...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCATCGAGAAGCCTGCTCTaGAGGGATGTTAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: IISRARQALPSDVLWLGPSRSLL*RDVKAT
Trigger: AGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGA...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CTCTCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCACAGGGTCGAGAAGCCTaGTCTGCAGGGATGTTAAAG +
Preference number: 4 (lower is better)
Translates to: LSLPVWASNRRAPTSSLPQGREA*SAGMLK
Trigger: CTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTG...TGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCCAGGGTCGAGAAGCCTaGTCTGCAGGGATGTTAAAG +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGQGREA*SAGMLK
Trigger: CTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTG...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGCATCCTCATTGCAGATaGAGCACCAGGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWHPHCR*STRGAP
Trigger: AGGAGCTCCCCTGGTGCTGCATCTGCAATGAGGATG...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CCAATGAATCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGGGCCCAGAAATGGGTaGCGCTGCCTGTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: PMNQHTLLDPLSARGGACGPRNG*RCLWDC
Trigger: GCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCC...ACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGATTCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
CDS-3UTR GCA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGCCCAGAAATGGGTaGCGCTGCCTGTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: PTSSLPVILSNGESFLIPGPRNG*RCLWDC
Trigger: GCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCC...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCAGGGGAGGGGCCTGTaGCCTAGAGCCAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: APTSSLPVILSNGESFLIQGRGL*PRARLQ
Trigger: CTGTAACCTGGCTCTAGGGCACAGGCCCCTCCCCTG...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGATTAGACCCACTAAGTaGCAGGGGAGGGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALEIRPTK*QGRGLC
Trigger: GCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAAT...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp TCCTTTGCCAGTAAGGCAGGAAGCAGGGTGTGTGTGCATTGTTCCTGCGTGCATCCGCAACTCAAGTGCTaGCTCAGCCAGCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SFASKAGSRVCVHCSCVHPQLKC*LSQQSA
Trigger: AGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGG...ATGCACGCAGGAACAATGCACACACACCCTGCTTCCTGCCTTACTGGCAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp GCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTTGGCAGAAGACCCTCTaGTCAGGACCTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: ASISACEGTNLGLFSWRSWQKTL*SGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCA...ACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
CDS-3UTR CCA 90 bp GACCACTTGGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCTGGCAGAAGACCCTCTaGTCAGGACCTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: DHLEALAEDPLVRTSWHCWQKTL*SGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCA...GCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGCAGAAGACCCTCTaGTCAGGACCTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGWQKTL*SGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCA...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCACCACTTGGAGGCATTaGCAGAAGACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGTTWRH*QKTLWS
Trigger: TGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGT...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCAGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPEVVTT*RHWQKT
Trigger: GGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTC...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp CATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: HSRDTKAQEGAYPSSVEPEVVTT*RHWQKT
Trigger: GGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTC...TGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALEVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp TCCTTTGCCAGTAAGGCAGGAAGCAGGGTGTGTGTGCATTGTTCCTGCGTGCATGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SFASKAGSRVCVHCSCVHVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...ATGCACGCAGGAACAATGCACACACACCCTGCTTCCTGCCTTACTGGCAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCCGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSRSAII*SCRVSP
Trigger: GGGACTGACACGACAAGACCAGATGATTGCTGAGCG...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWRSAII*SCRVSP
Trigger: GGGACTGACACGACAAGACCAGATGATTGCTGAGCG...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTACGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SLPVRGLTWACSPGGVVLRSAII*SCRVSP
Trigger: GGGACTGACACGACAAGACCAGATGATTGCTGAGCG...TAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp GTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCCGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: VQGREACSAGMLKPLASSRSAII*SCRVSP
Trigger: GGGACTGACACGACAAGACCAGATGATTGCTGAGCG...GGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CCA 90 bp ATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: IGGPRLLPSQSFSRMENLLGLFS*RSRARR
Trigger: GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAA...AAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTGAGGGGACTAACTTaGGCTTGTTCTCCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: SGRGLSIISRARQALPSDVRGLT*ACSPGG
Trigger: TCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC...GTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp ATGGCATTGCTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCGTGAGGGGACTAACTTaGGCTTGTTCTCCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: MALLADFLLGVPSPRHCCVRGLT*ACSPGG
Trigger: TCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC...GCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CCA 90 bp TTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTGAGGGGACTAACTTaGGCTTGTTCTCCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LFSWRSRARRSAIIWSCRVRGLT*ACSPGG
Trigger: TCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC...ACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CCA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: LPVWASNRRAPTSSLPVIPGWKG*NPDVHP
Trigger: AGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCTGGGTGGAAGGGATaGAACCCTGACGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: HQGSGRGLSIISRARQALPGWKG*NPDVHP
Trigger: AGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG...GAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCACGTGCCTCCATTTCCTaGGTGGAAGGGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: WRIFPHSRDTKAQEGAYPRASIS*VEGMEP
Trigger: GGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACG...TGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp AAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTGACGTTCATCCTTCGTGCCTCCATTTCCTaGGTGGAAGGGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: KSCLHFLGGRDGTLTFILRASIS*VEGMEP
Trigger: GGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACG...AAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR CCA 90 bp ATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTGTGTCTGCTGGGCTTaGGTCCTGGTGTCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: IGGPRLLPSQSFSRMENLCVCWA*VLVSGV
Trigger: CACACCGGACACCAGGACCCAAGCCCAGCAGACACA...AAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGTCGTCATCACTGTCTaGGAGGCGATAGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSIISRARQALPSDVLWLVVITV*EAIVLE
Trigger: CTCCAGGACTATCGCCTCCCAGACAGTGATGACGAC...CAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTCTCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGCAGGACTCTTTGGATaGCTGTCTCCTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: LSLPVWASNRRAPTSSLPAGLFG*LSPHPR
Trigger: ACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGC...TGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTTGCTGCAGGACTCTTTaGATGGCTGTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCCCRTL*MAVSSS
Trigger: GGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCA...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp TCAGGGGTCCGGTTAGGGCGCATTACTGGAAGAGAGATACTGAGACTGAATGGCCAGCGCAGCGTAGGGTaGCATCCTCATTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: SGVRLGRITGREILRLNGQRSVG*HPHCRC
Trigger: GCATCTGCAATGAGGATGCCACCCTACGCTGCGCTG...GCCATTCAGTCTCAGTATCTCTCTTCCAGTAATGCGCCCTAACCGGACCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGAGCTCAAAGGCATCATaGCCCTCTCGGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALESSKAS*PSRKQR
Trigger: CCGCTGCTTCCGAGAGGGCCATGATGCCTTTGAGCT...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp CTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCCTCTTGGCCTGCACGTaGAGGAGAGTAGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: LEWRIFPHSRDTKAQEGALLACT*RRVGRC
Trigger: ACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAG...GGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTTGTCTTCAGTGCTCTTaGCCTGCACGTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LPVWASNRRAPTSSLPVICLQCS*PARGGE
Trigger: CTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACA...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCATGTCTTCAGTGCTCTTaGCCTGCACGTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPCLQCS*PARGGE
Trigger: CTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACA...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp CCAATGAATCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGGCTGGGCCCAGAAATaGGTGCCGCTGCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: PMNQHTLLDPLSARGGACGWAQK*VPLPVG
Trigger: TCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCC...ACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGATTCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
CDS-3UTR CCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGTTGAGATCATTCTaGAGAGAGGCAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGWLRSF*REAAGP
Trigger: AGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCA...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCGGAATTAGTGCTCCCTaGGCCACCCTGGTTGAGATC +
Preference number: 4 (lower is better)
Translates to: HQGSGRGLSIISRARQALGISAP*ATLVEI
Trigger: GATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCC...GAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGAGGAGCCCTAGGAGCTaGGGTCCTTTGCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALERSPRS*GPLPVR
Trigger: CCTTACTGGCAAAGGACCCCAGCTCCTAGGGCTCCT...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR TCA 90 bp TCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: SGRGLSIISRARQALPSDIVLRW*PLGGIG
Trigger: GCCAATGCCTCCAAGTGGTCACCACCTCAGAACTAT...GTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR TCA 90 bp TTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCCAGCGGACAAAGAGGTaGGAACGGTGGCGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: FPPSHSLEWRIFPHSRDTQRTKR*ERWRGR
Trigger: CCTTCCTCGCCACCGTTCTCACCTCTTTGTCCGCTG...GGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR TCA 90 bp GAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCTGGGCCACCCTGGTTaGGATCATTCTGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ESFLIPGTPRLRKGPIHHLGHPG*DHSGER
Trigger: CCTCTCTCCAGAATGATCTCAACCAGGGTGGCCCAG...ATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR TCA 90 bp TCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGACCTGCGTGCATTGTGTaGGTAGTAGAGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SGLLIGGPRLLPSQSFSRPACIV*VVERLR
Trigger: TCTCAGCCTCTCTACTACTCACACAATGCACGCAGG...TCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR GCA 90 bp CTCTCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCACTGAACAGAAGGCCCTaGCACAATTCTTACAGCCGT +
Preference number: 4 (lower is better)
Translates to: LSLPVWASNRRAPTSSLPLNRRP*HNSYSR
Trigger: ACGGCTGTAAGAATTGTGGCAGGGCCTTCTGTTCAG...TGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCCTGAACAGAAGGCCCTaGCACAATTCTTACAGCCGT +
Preference number: 4 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSLNRRP*HNSYSR
Trigger: ACGGCTGTAAGAATTGTGGCAGGGCCTTCTGTTCAG...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GGCCTGTGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTTGGCTTCCAAGGCTaGCACACGCTTCTTATAGTT +
Preference number: 4 (lower is better)
Translates to: GLCPRARLQGSPVDSVWSLGFQG*HTLLIV
Trigger: AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAG...AGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCTTGCAGACTTTCGAAGTGCTGGGCTTTTaGTTGGCTTCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALAEDPLVRTSWHCLQTFEVLGF*LASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTC...GAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR GCA 90 bp AAGTCGTGCCTCCATTTCCTGGGTGGAAGGGATGGAACCCTGACGTTCATCCTTCCTGGCTCTGGGAAGTaGTGGGCTTTTGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KSCLHFLGGRDGTLTFILPGSGK*WAFAWL
Trigger: AAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGG...AAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGAGAAGGTAGAACTCTaGCCTGCAACGCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: HSRDTKAQEGAYPSSVEPEKVEL*PATLQV
Trigger: GACTTGCAGCGTTGCAGGGCAGAGTTCTACCTTCTC...TGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTCTTCAGTGAGCTGCTaGAGGACTCTTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGSSVSC*RTLWMA
Trigger: AGCCATCCAAAGAGTCCTGCAGCAGCTCACTGAAGA...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCTCTTCAGTGAGCTGCTaGAGGACTCTTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: VQGREACSAGMLKPLASSSSVSC*RTLWMA
Trigger: AGCCATCCAAAGAGTCCTGCAGCAGCTCACTGAAGA...GGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCGCTTCTTCAGTGAGCTaGTGCAGGACTCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSASSVS*CRTLWM
Trigger: CATCCAAAGAGTCCTGCAGCAGCTCACTGAAGAAGC...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCTGCTTCTTCAGTGAGCTaGTGCAGGACTCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: ALSNHLVLSCQSLALGSAASSVS*CRTLWM
Trigger: CATCCAAAGAGTCCTGCAGCAGCTCACTGAAGAAGC...AGCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp TGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCGATGTTAAAGCCACTTaGCTCATCCAGGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: CPRARLQGSPVDSVWSLPDVKAT*LIQGSF
Trigger: GAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATC...GGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTTCGAGAAGCCTGCTCTaGAGGGATGTTAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCSRSLL*RDVKAT
Trigger: AGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGA...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCTCGAGAAGCCTGCTCTaGAGGGATGTTAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: ACSPGGVVLGAQQSSGLVSRSLL*RDVKAT
Trigger: AGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGA...GACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp AGCCGTGCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGTCGAGAAGCCTGCTCTaGAGGGATGTTAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: SRASISACEGTNLGLFSWSRSLL*RDVKAT
Trigger: AGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGA...CCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTCGAGAAGCCTGCTCTaGAGGGATGTTAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGSRSLL*RDVKAT
Trigger: AGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGA...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCACAGGGTCGAGAAGCCTaGTCTGCAGGGATGTTAAAG +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPQGREA*SAGMLK
Trigger: CTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTG...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGCAGGGTCGAGAAGCCTaGTCTGCAGGGATGTTAAAG +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWQGREA*SAGMLK
Trigger: CTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTG...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCAGGGAAGCTTCTTCAGTGAGGGGTGGCATCCTCATTaGAGATGCAGCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LCRDVKATCLIQGSFFSEGWHPH*RCSTRG
Trigger: TCCCCTGGTGCTGCATCTGCAATGAGGATGCCACCC...CTCACTGAAGAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp ATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTGGGTGGCATCCTCATTaGAGATGCAGCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: IGGPRLLPSQSFSRMENLGWHPH*RCSTRG
Trigger: TCCCCTGGTGCTGCATCTGCAATGAGGATGCCACCC...AAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGGTCTCTCCCCATCATaGCTCTCACTTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ASNRRAPTSSLPVILSNGGLSPS*LSLPVW
Trigger: CCAGACTGGAAGTGAGAGGCATGATGGGGAGAGACC...TCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp AGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGCAGGGGAGGGGCCTGTaGCCTAGAGCCAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: SHSLEWRIFPHSRDTKAQQGRGL*PRARLQ
Trigger: CTGTAACCTGGCTCTAGGGCACAGGCCCCTCCCCTG...CTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTAAGGACCAGTTGGCCTaGCTCTTGGAATTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCKDQLA*LLELVL
Trigger: GAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTT...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACGAAGCAGGGTGTGTGTaGATTGTTCCTGCGTGCATT +
Preference number: 4 (lower is better)
Translates to: SRDTKAQEGAYPSSVEPDEAGCV*IVPACI
Trigger: AATGCACGCAGGAACAATGCACACACACCCTGCTTC...GTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGTGGCAGAAGACCCTCTaGTCAGGACCTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWWQKTL*SGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCA...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTACCACTTGGAGGCATTaGCAGAAGACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LPVWASNRRAPTSSLPVITTWRH*QKTLWS
Trigger: TGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGT...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTACCACTTGGAGGCATTaGCAGAAGACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LFSWRSRARRSAIIWSCRTTWRH*QKTLWS
Trigger: TGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGT...ACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALEEVVTT*RHWQKT
Trigger: GGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTC...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCACGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPRSAII*SCRVSP
Trigger: GGGACTGACACGACAAGACCAGATGATTGCTGAGCG...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGCGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWRSAII*SCRVSP
Trigger: GGGACTGACACGACAAGACCAGATGATTGCTGAGCG...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTTTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: APTSSLPVILSNGESFLILGLFS*RSRARR
Trigger: GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAA...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGTGAGGGGACTAACTTaGGCTTGTTCTCCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: ASNRRAPTSSLPVILSNGVRGLT*ACSPGG
Trigger: TCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC...TCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCAGTGAGGGGACTAACTTaGGCTTGTTCTCCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: WRIFPHSRDTKAQEGAYPVRGLT*ACSPGG
Trigger: TCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC...TGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGCCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: SFLIPGTPRLRKGPIHHQPPFPG*KGWNPD
Trigger: GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG...CTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: GESFLIPGTPRLRKGPIHPPFPG*KGWNPD
Trigger: GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG...ATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGGTCGTCATCACTGTCTaGGAGGCGATAGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SFLIPGTPRLRKGPIHHQVVITV*EAIVLE
Trigger: CTCCAGGACTATCGCCTCCCAGACAGTGATGACGAC...CTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GTGACCACTTGGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTTGCTGCAGGACTCTTTaGATGGCTGTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: VTTWRHWQKTLWSGPHGICCRTL*MAVSSS
Trigger: GGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCA...AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCATGCTGCAGGACTCTTTaGATGGCTGTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPCCRTL*MAVSSS
Trigger: GGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCA...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCTCTTGGCCTGCACGTaGAGGAGAGTAGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALELLACT*RRVGRC
Trigger: ACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAG...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGTGTCTTCAGTGCTCTTaGCCTGCACGTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALECLQCS*PARGGE
Trigger: CTCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACA...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp CATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCACCCGTAGATTCAGTCTaGTCTCTCCCCATCATGCCT +
Preference number: 4 (lower is better)
Translates to: HSRDTKAQEGAYPSSVEPPVDSV*SLPIMP
Trigger: AGGCATGATGGGGAGAGACCAGACTGAATCTACGGG...TGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGAGATGGTGGGGACTGGTaGCTAAGTGGGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGDGGDW*LSGAAQ
Trigger: CTGGGCAGCCCCACTTAGCCACCAGTCCCCACCATC...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTGATACTGAGACTGAATaGCAGGCAGGTTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: LPVWASNRRAPTSSLPVIDTETE*QAGWDR
Trigger: CCTGTCCCAACCTGCCTGCCATTCAGTCTCAGTATC...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
3UTR CAA 72 bp ATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCG +
Preference number: 4 (lower is better)
Translates to: IGRRPSGQDLMA*LADFLLGVPSP
Trigger: CGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR TCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGGAAGGGATGGAACCCTaGCGTTCATCCTTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALEEGMEP*RSSFRA
Trigger: TGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTC...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR TCA 90 bp TCAGGGGTCCGGTTAGGGCGCATTACTGGAAGAGAGATACTGAGACTGAATGGCGAAGGGATGGAACCCTaGCGTTCATCCTTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SGVRLGRITGREILRLNGEGMEP*RSSFRA
Trigger: TGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTC...GCCATTCAGTCTCAGTATCTCTCTTCCAGTAATGCGCCCTAACCGGACCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR TCA 90 bp ACCTCATGGCATTGCTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGAAGGGATGGAACCCTaGCGTTCATCCTTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: TSWHCLQTFCWVFPVRGTEGMEP*RSSFRA
Trigger: TGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTC...AGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
CDS-3UTR TCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGAGAGTCAGTCAAGCCTaGCCCAGAACACAATTCCCA +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWRVSQA*PRTQFP
Trigger: TGGGAATTGTGTTCTGGGTCAGGCTTGACTGACTCT...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGCTGAACAGAAGGCCCTaGCACAATTCTTACAGCCGT +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWLNRRP*HNSYSR
Trigger: ACGGCTGTAAGAATTGTGGCAGGGCCTTCTGTTCAG...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp GAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCTTGCAGACTCTGAACAGAAGGCCCTaGCACAATTCTTACAGCCGT +
Preference number: 4 (lower is better)
Translates to: EALAEDPLVRTSWHCLQTLNRRP*HNSYSR
Trigger: ACGGCTGTAAGAATTGTGGCAGGGCCTTCTGTTCAG...AGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000568062.5
CDS-3UTR GCA 90 bp GTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAGGACCTCATGGCATTaGTTGCAGACTTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VWASNRRAPTSSLPVILSRTSWH*LQTFCW
Trigger: CCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCT...CGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp ATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCTGCCCTGCAACGCTaGAAGTCGTGCCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: IGGPRLLPSQSFSRMENLSALQR*KSCLHF
Trigger: GAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGA...AAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TCAGGGGTCCGGTTAGGGCGCATTACTGGAAGAGAGATACTGAGACTGAATGGCGAGAAGGTAGAACTCTaGCCTGCAACGCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SGVRLGRITGREILRLNGEKVEL*PATLQV
Trigger: GACTTGCAGCGTTGCAGGGCAGAGTTCTACCTTCTC...GCCATTCAGTCTCAGTATCTCTCTTCCAGTAATGCGCCCTAACCGGACCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR GCA 90 bp GAGCTGCTGCAGGACTCTTTGGATGGCTGTCTCCTCATCCTCGTCGTCATCACTTCTTCAGTGAGCTGCTaGAGGACTCTTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: ELLQDSLDGCLLILVVITSSVSC*RTLWMA
Trigger: AGCCATCCAAAGAGTCCTGCAGCAGCTCACTGAAGA...AGTGATGACGACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp TCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAGCTTCTTCAGTGAGCTaGTGCAGGACTCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: SGLLIGGPRLLPSQSFSRASSVS*CRTLWM
Trigger: CATCCAAAGAGTCCTGCAGCAGCTCACTGAAGAAGC...TCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGGATGTTAAAGCCACTTaGCTCATCCAGGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLSIISRARQALPSDVLWDVKAT*LIQGSF
Trigger: GAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATC...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp TCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTGATGTTAAAGCCACTTaGCTCATCCAGGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SWRSRARRSAIIWSCRVSDVKAT*LIQGSF
Trigger: GAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATC...ACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTGGGTGGCATCCTCATTaGAGATGCAGCACCAGGGGA +
Preference number: 4 (lower is better)
Translates to: APTSSLPVILSNGESFLIGWHPH*RCSTRG
Trigger: TCCCCTGGTGCTGCATCTGCAATGAGGATGCCACCC...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAATTAGACCCACTAAGTaGCAGGGGAGGGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQIRPTK*QGRGLC
Trigger: GCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAAT...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp CTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCACTGAAGCTAAGGACCAGTTGGCCTaGCTCTTGGAATTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LADFLLGVPSPRHCCTEAKDQLA*LLELVL
Trigger: GAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTT...AGCTTCAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR GCA 90 bp GTGCATTGTGTGAGTAGTAGAGAGGCTGAGAAATCCAAGATGGTGGGGACTGGTCTCCCGCAACTCAAGTaGTGCCTCAGCCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: VHCVSSREAEKSKMVGTGLPQLK*CLSQQS
Trigger: AGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAG...ACCAGTCCCCACCATCTTGGATTTCTCAGCCTCTCTACTACTCACACAATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp TCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SFLIPGTPRLRKGPIHHQLQTFC*VFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAA...CTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGATTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: ASNRRAPTSSLPVILSNGLQTFC*VFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAA...TCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATTGGCAGAAGACCCTCTaGTCAGGACCTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: GESFLIPGTPRLRKGPIHWQKTL*SGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCA...ATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCAGGGGTCCGGTTAGGGCGCATTACTGGAAGAGAGATACTGAGACTGAATGGCACCACTTGGAGGCATTaGCAGAAGACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SGVRLGRITGREILRLNGTTWRH*QKTLWS
Trigger: TGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGT...GCCATTCAGTCTCAGTATCTCTCTTCCAGTAATGCGCCCTAACCGGACCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGTGCTGCAGGACTCTTTaGATGGCTGTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: QHTLLDPLSARGGACALECCRTL*MAVSSS
Trigger: GGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCA...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CCA 90 bp GAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCTCTTGGCCTGCACGTaGAGGAGAGTAGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: ESFLIPGTPRLRKGPIHHLLACT*RRVGRC
Trigger: ACATCTGCCTACTCTCCTCCACGTGCAGGCCAAGAG...ATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp AGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGCCATCGGACGTCCTGTaGCTGGGCCCAGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: SHSLEWRIFPHSRDTKAQPSDVL*LGPEMG
Trigger: ACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGG...CTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCCTTTGCCAGTAAGGCAGGAAGCAGGGTGTGTGTGCATTGTTCCTGCGTGCATCCCGTAGATTCAGTCTaGTCTCTCCCCATCATGCCT +
Preference number: 4 (lower is better)
Translates to: SFASKAGSRVCVHCSCVHPVDSV*SLPIMP
Trigger: AGGCATGATGGGGAGAGACCAGACTGAATCTACGGG...ATGCACGCAGGAACAATGCACACACACCCTGCTTCCTGCCTTACTGGCAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp GCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGATGGTTGAGATCATTCTaGAGAGAGGCAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ASNRRAPTSSLPVILSNGWLRSF*REAAGP
Trigger: AGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCA...TCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGCATGGCTAGTCGCTTaGCCAGGGCCAGAATCCGTT +
Preference number: 4 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQAWLVA*PGPESV
Trigger: AACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGC...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GTGCATTGTGTGAGTAGTAGAGAGGCTGAGAAATCCAAGATGGTGGGGACTGGTATGAGGCCACCAGGATaGGTAGGGCTGTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VHCVSSREAEKSKMVGTGMRPPG*VGLFLP
Trigger: AGGCAGGAACAGCCCTACCCATCCTGGTGGCCTCAT...ACCAGTCCCCACCATCTTGGATTTCTCAGCCTCTCTACTACTCACACAATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp GAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATGGGGCTGCCCAGAGCTaGAGCACAGTTGAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: ESFLIPGTPRLRKGPIHHGAAQS*STVELN
Trigger: ATTCAACTCAACTGTGCTCCAGCTCTGGGCAGCCCC...ATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR TCA 90 bp GAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATGAAGGGATGGAACCCTaGCGTTCATCCTTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: ESFLIPGTPRLRKGPIHHEGMEP*RSSFRA
Trigger: TGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTC...ATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CCTCCATTTCCTGGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PPFPGWKGWNPDVHPLGQPHGIA*RLSVGC
Trigger: ACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGG...CTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
CDS-3UTR GCA 90 bp TGCTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCACTGAAGCCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: CLQTFCWVFPVRGTAALKPHGIA*RLSVGC
Trigger: ACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGG...CTTCAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR GCA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCAAGGACCTCATGGCATTaGTTGCAGACTTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: HTLLDPLSARGGACALEPRTSWH*LQTFCW
Trigger: CCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCT...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp CATTGCTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCACTGAGGACCTCATGGCATTaGTTGCAGACTTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: HCLQTFCWVFPVRGTAALRTSWH*LQTFCW
Trigger: CCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCT...CAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR GCA 90 bp TCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACCTTGGCTTCCAAGGCTaGCACACGCTTCTTATAGTT +
Preference number: 4 (lower is better)
Translates to: SGRGLSIISRARQALPSDLGFQG*HTLLIV
Trigger: AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAG...GTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TTCAGTGAGCTGCTGCAGGACTCTTTGGATGGCTGTCTCCTCATCCTCGTCGTCCTTGGCTTCCAAGGCTaGCACACGCTTCTTATAGTT +
Preference number: 4 (lower is better)
Translates to: FSELLQDSLDGCLLILVVLGFQG*HTLLIV
Trigger: AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAG...GACGACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAGCTCACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR GCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGCTTGGCTTCCAAGGCTaGCACACGCTTCTTATAGTT +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWLGFQG*HTLLIV
Trigger: AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAG...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGAAGTGCTGGGCTTTTaGTTGGCTTCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQEVLGF*LASKAA
Trigger: GGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTC...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAACAACGCTGCAAGTCGTaGCTCCATTTCCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQQRCKS*LHFLGG
Trigger: TCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTG...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCTTCAGTGAGCTGCTaGAGGACTCTTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: WRIFPHSRDTKAQEGAYPSSVSC*RTLWMA
Trigger: AGCCATCCAAAGAGTCCTGCAGCAGCTCACTGAAGA...TGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGATGTTAAAGCCACTTaGCTCATCCAGGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWDVKAT*LIQGSF
Trigger: GAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATC...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR GCA 90 bp AGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGTCAGTGCTCTTGGCCTaGACGTGGAGGAGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SHSLEWRIFPHSRDTKAQSVLLA*TWRRVG
Trigger: GCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGA...CTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp ACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGTCAGTGCTCTTGGCCTaGACGTGGAGGAGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: TSSLPVILSNGESFLIPGSVLLA*TWRRVG
Trigger: GCCTACTCTCCTCCACGTGCAGGCCAAGAGCACTGA...CCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAAAGGACCAGTTGGCCTaGCTCTTGGAATTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: ASNRRAPTSSLPVILSNGKDQLA*LLELVL
Trigger: GAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTT...TCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp ACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGCCTCAGCCAGCAGTCTaGTCTTCTCCTCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TSSLPVILSNGESFLIPGPQPAV*SSPPPR
Trigger: CCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGG...CCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCACCGCAACTCAAGTGCTaGCTCAGCCAGCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PTSSLPVILSNGESFLIPPQLKC*LSQQSA
Trigger: AGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGG...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp ACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGCTCCCGCAACTCAAGTaGTGCCTCAGCCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TSSLPVILSNGESFLIPGLPQLK*CLSQQS
Trigger: AGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAG...CCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCATGTAAAGGGTACATaGCGAGAGGTCAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: APTSSLPVILSNGESFLIHVKGT*REVRGP
Trigger: CGGACCCCTGACCTCTCGGCATGTACCCTTTACATG...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp ATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTACCACTTGGAGGCATTaGCAGAAGACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: IGGPRLLPSQSFSRMENLTTWRH*QKTLWS
Trigger: TGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGT...AAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGAGTCAGTCCCTGGCTCTaGGAAGTGCTGGGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGVSPWL*EVLGFC
Trigger: GCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGAC...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp AGACCCTCTGGTCAGGACCTCATGGCATTGCTTGCAGACTTTCTGTTGGGTGTTCGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: RPSGQDLMALLADFLLGVRSAII*SCRVSP
Trigger: GGGACTGACACGACAAGACCAGATGATTGCTGAGCG...AACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CCA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACGTGCCTCCATTTCCTaGGTGGAAGGGATGGAACCC +
Preference number: 4 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGRASIS*VEGMEP
Trigger: GGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACG...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CCAATGAATCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTAGATCCTGTGTCTGCTaGGCTTGGGTCCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PMNQHTLLDPLSARGGACRSCVC*AWVLVS
Trigger: GGACACCAGGACCCAAGCCCAGCAGACACAGGATCT...ACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGATTCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
CDS-3UTR CCA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAAGATCCTGTGTCTGCTaGGCTTGGGTCCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PTSSLPVILSNGESFLIPRSCVC*AWVLVS
Trigger: GGACACCAGGACCCAAGCCCAGCAGACACAGGATCT...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGTCGTCATCACTGTCTaGGAGGCGATAGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQVVITV*EAIVLE
Trigger: CTCCAGGACTATCGCCTCCCAGACAGTGATGACGAC...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATTGCTGCAGGACTCTTTaGATGGCTGTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: ESFLIPGTPRLRKGPIHHCCRTL*MAVSSS
Trigger: GGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCA...ATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACAGCGCAGCGTAGGGTaGCATCCTCATTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGQRSVG*HPHCRC
Trigger: GCATCTGCAATGAGGATGCCACCCTACGCTGCGCTG...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TGCTCTGCAGGGATGTTAAAGCCACTTGCCTCATCCAGGGAAGCTTCTTCAGTGCCCGTAGATTCAGTCTaGTCTCTCCCCATCATGCCT +
Preference number: 4 (lower is better)
Translates to: CSAGMLKPLASSREASSVPVDSV*SLPIMP
Trigger: AGGCATGATGGGGAGAGACCAGACTGAATCTACGGG...CACTGAAGAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CCA 90 bp GAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATTGGTTGAGATCATTCTaGAGAGAGGCAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ESFLIPGTPRLRKGPIHHWLRSF*REAAGP
Trigger: AGGCCCAGCTGCCTCTCTCCAGAATGATCTCAACCA...ATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GCTGGGCCCAATGAATCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGAATTAGTGCTCCCTaGGCCACCCTGGTTGAGATC +
Preference number: 4 (lower is better)
Translates to: AGPNESTYFIRPTKCQGRGISAP*ATLVEI
Trigger: GATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCC...CCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGATTCATTGGGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp AGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGCATGGCTAGTCGCTTaGCCAGGGCCAGAATCCGTT +
Preference number: 4 (lower is better)
Translates to: SHSLEWRIFPHSRDTKAQAWLVA*PGPESV
Trigger: AACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGC...CTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACGAGAAGTTCATAGGATaGCTCAACCTTTTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: SRDTKAQEGAYPSSVEPDEKFIG*LNLFPH
Trigger: ATGGGGGAAAAGGTTGAGCCATCCTATGAACTTCTC...GTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR TCA 90 bp TTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCGAAGGGATGGAACCCTaGCGTTCATCCTTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: FPPSHSLEWRIFPHSRDTEGMEP*RSSFRA
Trigger: TGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTC...GGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAAGGACCTCATGGCATTaGTTGCAGACTTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: ASNRRAPTSSLPVILSNGRTSWH*LQTFCW
Trigger: CCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCT...TCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TCCTTTGCCAGTAAGGCAGGAAGCAGGGTGTGTGTGCATTGTTCCTGCGTGCATCTTGGCTTCCAAGGCTaGCACACGCTTCTTATAGTT +
Preference number: 4 (lower is better)
Translates to: SFASKAGSRVCVHCSCVHLGFQG*HTLLIV
Trigger: AACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAG...ATGCACGCAGGAACAATGCACACACACCCTGCTTCCTGCCTTACTGGCAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR GCA 90 bp ACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACCTCAGCTGCCAGCTaGGTTAGCAGATCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TSSLPVILSNGESFLIPGTSAAS*VSRSCV
Trigger: GACACAGGATCTGCTAACGCAGCTGGCAGCTGAGGT...CCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp GCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGATGTTAAAGCCACTTaGCTCATCCAGGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: ASNRRAPTSSLPVILSNGDVKAT*LIQGSF
Trigger: GAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATC...TCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp AGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGCATCCTCATTGCAGATaGAGCACCAGGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SHSLEWRIFPHSRDTKAQHPHCR*STRGAP
Trigger: AGGAGCTCCCCTGGTGCTGCATCTGCAATGAGGATG...CTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CCAATGAATCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTCATCCTCATTGCAGATaGAGCACCAGGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PMNQHTLLDPLSARGGACHPHCR*STRGAP
Trigger: AGGAGCTCCCCTGGTGCTGCATCTGCAATGAGGATG...ACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGATTCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
CDS-3UTR CCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTTTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: APTSSLPVILSNGESFLILQTFC*VFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAA...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCACCACTTGGAGGCATTaGCAGAAGACCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: FPPSHSLEWRIFPHSRDTTTWRH*QKTLWS
Trigger: TGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGT...GGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: PTSSLPVILSNGESFLIPEVVTT*RHWQKT
Trigger: GGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTC...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACCTCCATTTCCTGGGTaGAAGGGATGGAACCCTGAC +
Preference number: 4 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGPPFPG*KGWNPD
Trigger: GTCAGGGTTCCATCCCTTCCACCCAGGAAATGGAGG...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGCAGGACTCTTTGGATaGCTGTCTCCTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQAGLFG*LSPHPR
Trigger: ACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGC...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCAGTCATTCTCTCGAATaGAGAATCTTTCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: CPRARLQGSPVDSVWSLPSHSLE*RIFPHS
Trigger: GGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT...GGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCCCCGTAGATTCAGTCTaGTCTCTCCCCATCATGCCT +
Preference number: 4 (lower is better)
Translates to: FPPSHSLEWRIFPHSRDTPVDSV*SLPIMP
Trigger: AGGCATGATGGGGAGAGACCAGACTGAATCTACGGG...GGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp AGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGCTCCCTGGGCCACCCTaGTTGAGATCATTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SHSLEWRIFPHSRDTKAQLPGPP*LRSFWR
Trigger: TCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAG...CTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CCAATGAATCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGGAATTAGTGCTCCCTaGGCCACCCTGGTTGAGATC +
Preference number: 4 (lower is better)
Translates to: PMNQHTLLDPLSARGGACGISAP*ATLVEI
Trigger: GATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCC...ACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGATTCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336455.9
ENST00000355341.8
CDS-3UTR TCA 90 bp CCAATGAATCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: PMNQHTLLDPLSARGGACIVLRW*PLGGIG
Trigger: GCCAATGCCTCCAAGTGGTCACCACCTCAGAACTAT...ACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGATTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
CDS-3UTR TCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTAGAGTCAGTCAAGCCTaGCCCAGAACACAATTCCCA +
Preference number: 4 (lower is better)
Translates to: APTSSLPVILSNGESFLIRVSQA*PRTQFP
Trigger: TGGGAATTGTGTTCTGGGTCAGGCTTGACTGACTCT...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355341.8
ENST00000564258.5
CDS-3UTR GCA 90 bp ATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTCCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: IGGPRLLPSQSFSRMENLPHGIA*RLSVGC
Trigger: ACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGG...AAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp AGACCCTCTGGTCAGGACCTCATGGCATTGCTTGCAGACTTTCTGTTGGGTGTTCCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RPSGQDLMALLADFLLGVPHGIA*RLSVGC
Trigger: ACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGG...AACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR GCA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTTCTTCAGTGAGCTGCTaGAGGACTCTTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: APTSSLPVILSNGESFLISSVSC*RTLWMA
Trigger: AGCCATCCAAAGAGTCCTGCAGCAGCTCACTGAAGA...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCTCGAGAAGCCTGCTCTaGAGGGATGTTAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: FPPSHSLEWRIFPHSRDTSRSLL*RDVKAT
Trigger: AGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGA...GGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CCAATGAATCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTCAGGGTCGAGAAGCCTaGTCTGCAGGGATGTTAAAG +
Preference number: 4 (lower is better)
Translates to: PMNQHTLLDPLSARGGACQGREA*SAGMLK
Trigger: CTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTG...ACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGATTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
CDS-3UTR GCA 90 bp AGGGGTCCGGTTAGGGCGCATTACTGGAAGAGAGATACTGAGACTGAATGGCAGTGTGTGCATTGTTCCTaGGTGCATTGTGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RGPVRAHYWKRDTETEWQCVHCS*VHCVSS
Trigger: ACTACTCACACAATGCACGCAGGAACAATGCACACA...CTGCCATTCAGTCTCAGTATCTCTCTTCCAGTAATGCGCCCTAACCGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp ACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGTTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: TSSLPVILSNGESFLIPGLQTFC*VFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAA...CCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGATGGCAGAAGACCCTCTaGTCAGGACCTCATGGCATT +
Preference number: 4 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGWQKTL*SGPHGI
Trigger: AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCA...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACGCTCAGCAATCATCTaGTCTTGTCGTGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGRSAII*SCRVSP
Trigger: GGGACTGACACGACAAGACCAGATGATTGCTGAGCG...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp AGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGCAGGACTCTTTGGATaGCTGTCTCCTCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: SHSLEWRIFPHSRDTKAQAGLFG*LSPHPR
Trigger: ACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGC...CTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTAGTCATTCTCTCGAATaGAGAATCTTTCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCSHSLE*RIFPHS
Trigger: GGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CCAATGAATCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTCTCTCACTTCCAGTCTaGGCTTCTAATAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PMNQHTLLDPLSARGGACLSLPV*ASNRRA
Trigger: GGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG...ACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGATTCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
CDS-3UTR CCA 90 bp TCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGGTTAGGGCGCATTACTaGAAGAGAGATACTGAGACT +
Preference number: 4 (lower is better)
Translates to: SFLIPGTPRLRKGPIHHQVRAHY*KRDTET
Trigger: AGTCTCAGTATCTCTCTTCCAGTAATGCGCCCTAAC...CTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CCA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGAAGGGCTCTTTATAGTTaGTTCCAGCCAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGRALYS*FQPGAG
Trigger: TCCTGCCCCTGGCTGGAACCAACTATAAAGAGCCCT...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR GCA 90 bp ACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGCTGAACAGAAGGCCCTaGCACAATTCTTACAGCCGT +
Preference number: 4 (lower is better)
Translates to: TSSLPVILSNGESFLIPGLNRRP*HNSYSR
Trigger: ACGGCTGTAAGAATTGTGGCAGGGCCTTCTGTTCAG...CCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAACCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQPHGIA*RLSVGC
Trigger: ACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGG...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGATCTTCAGTGAGCTGCTaGAGGACTCTTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGSSVSC*RTLWMA
Trigger: AGCCATCCAAAGAGTCCTGCAGCAGCTCACTGAAGA...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp TTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCGATGTTAAAGCCACTTaGCTCATCCAGGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: FPPSHSLEWRIFPHSRDTDVKAT*LIQGSF
Trigger: GAAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATC...GGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR GCA 90 bp CTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGAAAGGACCAGTTGGCCTaGCTCTTGGAATTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLPSQSFSRMENLSSFQGKDQLA*LLELVL
Trigger: GAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTT...TCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp AGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGAGAAATCCAAGATGGTaGGGACTGGTGGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: SHSLEWRIFPHSRDTKAQRNPRW*GLVAKW
Trigger: CCACTTAGCCACCAGTCCCCACCATCTTGGATTTCT...CTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR GCA 90 bp ACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGCCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: TSSLPVILSNGESFLIPGPHGIA*RLSVGC
Trigger: ACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGG...CCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp GGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATAGTCATTCTCTCGAATaGAGAATCTTTCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: GESFLIPGTPRLRKGPIHSHSLE*RIFPHS
Trigger: GGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT...ATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp TCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGAGTCATTCTCTCGAATaGAGAATCTTTCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: SFLIPGTPRLRKGPIHHQSHSLE*RIFPHS
Trigger: GGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT...CTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CCA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCATTTACCAGAGGAATCTaGCAGGTCTGTGATAGGGAC +
Preference number: 4 (lower is better)
Translates to: PTSSLPVILSNGESFLIPFTRGI*QVCDRD
Trigger: GTCCCTATCACAGACCTGCCAGATTCCTCTGGTAAA...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336455.9
CDS-3UTR TCA 90 bp CCAATGAATCAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGGAGCACAGTTGAGTTaGATGAATACATGTTTACTT +
Preference number: 4 (lower is better)
Translates to: PMNQHTLLDPLSARGGACGAQLS*MNTCLL
Trigger: AAGTAAACATGTATTCATTCAACTCAACTGTGCTCC...ACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTGATTCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS CCA 90 bp GCCTCGGCCACTGCTGGCATCCGCTCTCCAGGTTCATTCGGGTCCTaGGCGGGGAGCGAGGGTCGGCGCTATGCCCTCCGCAGGCGGGCT +
Preference number: 5 (lower is better)
Translates to: ASATAGIRSPGSFGS*AGSEGRRYALRRRA
Trigger: AGCCCGCCTGCGGAGGGCATAGCGCCGACCCTCGCTCCCCGCCCAGGACCCGAATGAACCTGGAGAGCGGATGCCAGCAGTGGCCGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS GCA 90 bp GCACTGTCCCGCCGCGACCTAGAGCAGGGAATCCGGACGCTCTCCTaGAGCCAGCGTACGGCAGCGGCGGCAACGGGGGCTGCTGGGAGT +
Preference number: 5 (lower is better)
Translates to: ALSRRDLEQGIRTLS*SQRTAAAATGAAGS
Trigger: ACTCCCAGCAGCCCCCGTTGCCGCCGCTGCCGTACGCTGGCTGCAGGAGAGCGTCCGGATTCCCTGCTCTAGGTCGCGGCGGGACAGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS-3UTR CAA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGACTCTGCCCCGCGGGGTaGCGTCCAGGGTCGAGAAGC +
Preference number: 5 (lower is better)
Translates to: LWLGPEMGAAACGTALPGLCPAG*RPGSRS
Trigger: GCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAG...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS GCA 90 bp TCCAGGTTCATTCGGGTCCTGGGCGGGGAGCGAGGGTCGGCGCTATaGCCTCCGCAGGCGGGCTCCCAGACATTTCCTGGACGGTCCGAG +
Preference number: 5 (lower is better)
Translates to: SRFIRVLGGERGSAL*PPQAGSQTFPGRSE
Trigger: CTCGGACCGTCCAGGAAATGTCTGGGAGCCCGCCTGCGGAGGGCATAGCGCCGACCCTCGCTCCCCGCCCAGGACCCGAATGAACCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS TCA 90 bp ACCTACTCTCCATGGTGGCTCCCAGCACCGCAGGGTCTGCAGAGCTaGGATCACGCCGGCCAAGTCCTGGGCCCCTTGGACCCTCACCCC +
Preference number: 5 (lower is better)
Translates to: TYSPWWLPAPQGLQS*DHAGQVLGPLDPHP
Trigger: GGGGTGAGGGTCCAAGGGGCCCAGGACTTGGCCGGCGTGATCTCAGCTCTGCAGACCCTGCGGTGCTGGGAGCCACCATGGAGAGTAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000355341.8
ENST00000563530.1
ENST00000566407.5
ENST00000567756.5
ENST00000568062.5
CDS GCA 90 bp GCCGTAGCACCTACTCTCCATGGTGGCTCCCAGCACCGCAGGGTCTaGAGAGCTGAGATCACGCCGGCCAAGTCCTGGGCCCCTTGGACC +
Preference number: 5 (lower is better)
Translates to: AVAPTLHGGSQHRRV*RAEITPAKSWAPWT
Trigger: GGTCCAAGGGGCCCAGGACTTGGCCGGCGTGATCTCAGCTCTGCAGACCCTGCGGTGCTGGGAGCCACCATGGAGAGTAGGTGCTACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000355341.8
ENST00000563530.1
ENST00000566407.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CAA 90 bp GCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTCTGTGTCTGCTGGGCTaGGGTCCTGGTGTCCGGTGT +
Preference number: 5 (lower is better)
Translates to: ALPRGVASRVEKPALQGCLCLLG*GPGVRC
Trigger: ACACCGGACACCAGGACCCAAGCCCAGCAGACACAG...ACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CAA 90 bp GCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTAGCATGGCTAGTCGCTaGGCCAGGGCCAGAATCCGT +
Preference number: 5 (lower is better)
Translates to: ALPRGVASRVEKPALQGCSMASR*ARARIR
Trigger: ACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCT...ACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CAA 90 bp TGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCCTCTGCCCCGCGGGGTaGCGTCCAGGGTCGAGAAGC +
Preference number: 5 (lower is better)
Translates to: CPRARLQGSPVDSVWSLPLCPAG*RPGSRS
Trigger: GCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAG...GGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAACTCTGCCCCGCGGGGTaGCGTCCAGGGTCGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKLCPAG*RPGSRS
Trigger: GCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAG...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp GGCCTGTGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCTGCCCCGCGGGGTaGCGTCCAGGGTCGAGAAGC +
Preference number: 5 (lower is better)
Translates to: GLCPRARLQGSPVDSVWSLCPAG*RPGSRS
Trigger: GCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAG...AGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCACAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS GCA 90 bp ACAATTCTTACAGCCGTACTAGAGCAGGGAATCCGGACGCTCTCCTaGAGCCAGCGTACGGCAGCGGCGGCAACGGGGGCTGCTGGGAGT +
Preference number: 5 (lower is better)
Translates to: TILTAVLEQGIRTLS*SQRTAAAATGAAGS
Trigger: ACTCCCAGCAGCCCCCGTTGCCGCCGCTGCCGTACGCTGGCTGCAGGAGAGCGTCCGGATTCCCTGCTCTAGTACGGCTGTAAGAATTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564258.5
CDS GCA 90 bp CCCAGAAGCCCTGGACTGTGTCCTCTAGGCAACCCCATCTGCCCCTaGTCACTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: PRSPGLCPLGNPICP*SLGLFSWRSRARRS
Trigger: TGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAGTGAGCAGGGGCAGATGGGGTTGCCTAGAGGACACAGTCCAGGGCTTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 90 bp CAGGGATCCAGGCAGCCCTTGAGCTCTCGCACAGAACATTCCACCTaGACCCACCGGAAGCAGCGGGCACAGAAGAGGTCCCCATCGCAG +
Preference number: 5 (lower is better)
Translates to: QGSRQPLSSRTEHST*THRKQRAQKRSPSQ
Trigger: CTGCGATGGGGACCTCTTCTGTGCCCGCTGCTTCCGGTGGGTGCAGGTGGAATGTTCTGTGCGAGAGCTCAAGGGCTGCCTGGATCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS-3UTR CAA 90 bp CTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTTGACCACTTGGAGGCATaGGCAGAAGACCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: LCPAGLRPGSRSLLCRDVDHLEA*AEDPLV
Trigger: GACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC...AACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CAA 90 bp GCCTCTATCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCTCTGCCCCGCGGGGTaGCGTCCAGGGTCGAGAAGC +
Preference number: 5 (lower is better)
Translates to: ASISACEGTNLGLFSWRSLCPAG*RPGSRS
Trigger: GCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAG...ACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS GCA 90 bp CTCAGTCCCAGAAGCCCTGGACTGTGTCCTCTAGGCAACCCCATCTaGCCCTGCTCACTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: LSPRSPGLCPLGNPI*PCSLGLFSWRSRAR
Trigger: CCTAGCACGACTCCGCCAGGAGAACAAGCCCAGTGAGCAGGGGCAGATGGGGTTGCCTAGAGGACACAGTCCAGGGCTTCTGGGACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS-3UTR CAA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGCTGTGTCTGCTGGGCTaGGGTCCTGGTGTCCGGTGT +
Preference number: 5 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWLCLLG*GPGVRC
Trigger: ACACCGGACACCAGGACCCAAGCCCAGCAGACACAG...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp TATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGCTCTGCCCCGCGGGGTaGCGTCCAGGGTCGAGAAGC +
Preference number: 5 (lower is better)
Translates to: YPSSVEPDKLSHRTSCGWLCPAG*RPGSRS
Trigger: GCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAG...CCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp GCTCTGCCCCGCGGGGTTGCGTCCAGGGTCGAGAAGCCTGCTCTGCAGGGATGTTCCTCCAAGGACCAGTaGGCCTGCCTCTTGGAATTA +
Preference number: 5 (lower is better)
Translates to: ALPRGVASRVEKPALQGCSSKDQ*ACLLEL
Trigger: TAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGA...ACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS CCA 90 bp CCTGTGGCTGCTGATTCCCTATCTCCAGGGACCAGTGGGCAGGTCTaGGTCTGGGTCACAGGAGGGGGCCCAAAGAGAACAGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: PVAADSLSPGTSGQV*VWVTGGGPKRTGAS
Trigger: TGAAGCTCCTGTTCTCTTTGGGCCCCCTCCTGTGACCCAGACCCAGACCTGCCCACTGGTCCCTGGAGATAGGGAATCAGCAGCCACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS-3UTR CAA 90 bp CTGTGGCTGGGCCCAGAAATGGGTGCCGCTGCCTGTGGGACTGCCCTTCCGGGAACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: LWLGPEMGAAACGTALPGTSWHC*QTFCWV
Trigger: CACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGT...TCCCGGAAGGGCAGTCCCACAGGCAGCGGCACCCATTTCTGGGCCCAGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp AGGCTGCCACACGCTTCTTATAGTTCTGAGGTGGTGACCACTTGGAGGCATTGGCTCTGCCCCGCGGGGTaGCGTCCAGGGTCGAGAAGC +
Preference number: 5 (lower is better)
Translates to: RLPHASYSSEVVTTWRHWLCPAG*RPGSRS
Trigger: GCTTCTCGACCCTGGACGCAACCCCGCGGGGCAGAG...CCAATGCCTCCAAGTGGTCACCACCTCAGAACTATAAGAAGCGTGTGGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CAA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGCAGTTGGCCTGCCTCTaGGAATTAGTGCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVQLACL*ELVLPG
Trigger: CCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTG...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS CCA 90 bp CCTCTAGGCAACCCCATCTGCCCCTGCTCACTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGT +
Preference number: 5 (lower is better)
Translates to: PLGNPICPCSLGLFS*RSRARRSAIIWSCR
Trigger: ACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAGTGAGCAGGGGCAGATGGGGTTGCCTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS-3UTR CAA 90 bp CCTGGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGGACCACTTGGAGGCATaGGCAGAAGACCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: PGWKGWNPDVHPLGQPAVDHLEA*AEDPLV
Trigger: GACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC...CACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000567756.5
CDS-3UTR CAA 90 bp CTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: LPVRGLTWACSPGGVVLGVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...GCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CAA 90 bp GTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGGGGACTAACTTGGGCTaGTTCTCCTGGCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: VRGLTWACSPGGVVLGAQGTNLG*FSWRSR
Trigger: ACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCC...CTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CAA 90 bp GAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAGGGACTAACTTGGGCTaGTTCTCCTGGCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: EGTNLGLFSWRSRARRSAGTNLG*FSWRSR
Trigger: ACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCC...TGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CAA 90 bp GGGTGGAAGGGATGGAACCCTGACGTTCATCCTTTAGGGCAGCCAGCCGTGCCTTGTGAGGGGACTAACTaGGGCTTGTTCTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: GWKGWNPDVHPLGQPAVPCEGTN*GLFSWR
Trigger: CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACA...AGGCACGGCTGGCTGCCCTAAAGGATGAACGTCAGGGTTCCATCCCTTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000569057.5
CDS-3UTR CAA 90 bp CTCTCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCACTGTGTCTGCTGGGCTaGGGTCCTGGTGTCCGGTGT +
Preference number: 5 (lower is better)
Translates to: LSLPVWASNRRAPTSSLPLCLLG*GPGVRC
Trigger: ACACCGGACACCAGGACCCAAGCCCAGCAGACACAG...TGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp GTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTCTGTGTCTGCTGGGCTaGGGTCCTGGTGTCCGGTGT +
Preference number: 5 (lower is better)
Translates to: VVLGAQQSSGLVVSVPGSLCLLG*GPGVRC
Trigger: ACACCGGACACCAGGACCCAAGCCCAGCAGACACAG...AGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CAA 90 bp GAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCACAGTTGGCCTGCCTCTaGGAATTAGTGCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: EGTNLGLFSWRSRARRSAQLACL*ELVLPG
Trigger: CCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTG...TGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CAA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAAGCATGGCTAGTCGCTaGGCCAGGGCCAGAATCCGT +
Preference number: 5 (lower is better)
Translates to: ISRARQALPSDVLWLGPESMASR*ARARIR
Trigger: ACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCT...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp CGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGAGCATGGCTAGTCGCTaGGCCAGGGCCAGAATCCGT +
Preference number: 5 (lower is better)
Translates to: RARRSAIIWSCRVSPWLWSMASR*ARARIR
Trigger: ACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCT...CCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS TCA 90 bp ACAGAAGGCCCTGCCACAATTCTTACAGCCGTACTACAAGAAACATaGAGCGGGAGATCCCCCTCTCACCCGCCCCTGCAGGCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: TEGPATILTAVLQET*SGRSPSHPPLQAAP
Trigger: GGGAGCAGCCTGCAGGGGCGGGTGAGAGGGGGATCTCCCGCTTCATGTTTCTTGTAGTACGGCTGTAAGAATTGTGGCAGGGCCTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000560078.1
ENST00000563530.1
ENST00000566767.1
CDS CCA 90 bp TGCCCCGGAAGCAGGAGGAAGTGTGGTAATCTAACTCCAGCGACCTaGAGAAGGGCAGGCTGCGGGATGGGGAAGATTTCAGAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: CPGSRRKCGNLTPAT*RRAGCGMGKISEQR
Trigger: CCTCTGCTCTGAAATCTTCCCCATCCCGCAGCCTGCCCTTCTCCAGGTCGCTGGAGTTAGATTACCACACTTCCTCCTGCTTCCGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS-3UTR CAA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAAGACCACTTGGAGGCATaGGCAGAAGACCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKDHLEA*AEDPLV
Trigger: GACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp GAATCCGTTCCTGCCTCGTGTTCTCCTCCCGCAACTCAAGTGCTGCCTCAGCCAGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: ESVPASCSPPATQVLPQPVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...TGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAGGAACGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CAA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAGGGACTAACTTGGGCTaGTTCTCCTGGCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: ISRARQALPSDVLWLGPEGTNLG*FSWRSR
Trigger: ACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCC...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCATGTGAGGGGACTAACTaGGGCTTGTTCTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: IISRARQALPSDVLWLGPCEGTN*GLFSWR
Trigger: CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACA...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTGTGTCTGCTGGGCTaGGGTCCTGGTGTCCGGTGT +
Preference number: 5 (lower is better)
Translates to: LPVWASNRRAPTSSLPVILCLLG*GPGVRC
Trigger: ACACCGGACACCAGGACCCAAGCCCAGCAGACACAG...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp GTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGCTGCTGCAGGACTCTTaGGATGGCTGTCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: VEPDKLSHRTSCGWAQKWLLQDS*DGCLLI
Trigger: GATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAG...CCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp GAATCCGTTCCTGCCTCGTGTTCTCCTCCCGCAACTCAAGTGCTGCCTCAGCCAGTGTCTTCAGTGCTCTaGGCCTGCACGTGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: ESVPASCSPPATQVLPQPVSSVL*ACTWRR
Trigger: TCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACAC...TGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAGGAACGGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561768.5
CDS-3UTR CAA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAAGTGTCTTCAGTGCTCTaGGCCTGCACGTGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKVSSVL*ACTWRR
Trigger: TCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACAC...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp TCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCAGTTGGCCTGCCTCTaGGAATTAGTGCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SACEGTNLGLFSWRSRARQLACL*ELVLPG
Trigger: CCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTG...CCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CAA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGTCCTCCAAGGACCAGTaGGCCTGCCTCTTGGAATTA +
Preference number: 5 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVSSKDQ*ACLLEL
Trigger: TAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGA...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCAGCATGGCTAGTCGCTaGGCCAGGGCCAGAATCCGT +
Preference number: 5 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSSMASR*ARARIR
Trigger: ACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCT...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS TCA 90 bp CGGGATGGGGAAGATTTCAGAGCAGAGGGAGTAACGGGCTTGGTGTaGTGGACACCGCGCTTCGGAGGAGCAGGGTGGAGAGAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: RDGEDFRAEGVTGLV*WTPRFGGAGWREEN
Trigger: GTTTTCTTCTCTCCACCCTGCTCCTCCGAAGCGCGGTGTCCATCACACCAAGCCCGTTACTCCCTCTGCTCTGAAATCTTCCCCATCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS TCA 90 bp ACTTGCCTCATCCAGGGAAGCTTCTTCAGTGAGCTGCGGACAGGGTaGAGATGTACTACTCCCCTGCTTCAGGCCCAGGCCCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: TCLIQGSFFSELRTG*RCTTPLLQAQALHL
Trigger: GAGATGGAGGGCCTGGGCCTGAAGCAGGGGAGTAGTACATCTTCACCCTGTCCGCAGCTCACTGAAGAAGCTTCCCTGGATGAGGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 90 bp CCACAAAGGAGAATCAGAGAGACAGGGCAGAGCCGATGCCTCCTCTaGTCTTGCAGAGATGGAGGGAGGCTTGGCTCAGGATGGGCTAAC +
Preference number: 5 (lower is better)
Translates to: PQRRIRETGQSRCLL*SCRDGGRLGSGWAN
Trigger: GTTAGCCCATCCTGAGCCAAGCCTCCCTCCATCTCTGCAAGAGCAGAGGAGGCATCGGCTCTGCCCTGTCTCTCTGATTCTCCTTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 90 bp CACCCATGCCTGCCTCTTACCTGGTCAGGACCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: HPCLPLTWSGPHGIA*RLSVGCSQSEALLH
Trigger: GTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGAGGCAGGCATGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 90 bp GACTCTTTGGATGGCTGTCTCCTCATCCTCGTCGTCATCACTGTCTaGGAGGCGATAGTCCTGGAGGGTCACTGGGCCTCCTCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: DSLDGCLLILVVITV*EAIVLEGHWASSFP
Trigger: TGGAAAGGAGGAGGCCCAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGATGACGACGAGGATGAGGAGACAGCCATCCAAAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000560078.1
CDS CCA 90 bp GTGCCTCTATCTCTGCCTGTGAGGGGACTAACTCTGCAATTGGCATaGGGGGAGCCTTGTAAGGGCCAGAGGCATCTCAGTCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: VPLSLPVRGLTLQLA*GEPCKGQRHLSPRS
Trigger: GCTTCTGGGACTGAGATGCCTCTGGCCCTTACAAGGCTCCCCCCATGCCAATTGCAGAGTTAGTCCCCTCACAGGCAGAGATAGAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS-3UTR CAA 90 bp GCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: ACEGTNLGLFSWRSRARRQDLMA*LADFLL
Trigger: CAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTG...GCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CAA 90 bp GAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATGGGTGCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: EPDKLSHRTSCGWAQKWVQDLMA*LADFLL
Trigger: CAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTG...CACCCATTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCGACCACTTGGAGGCATaGGCAGAAGACCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSDHLEA*AEDPLV
Trigger: GACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTGACCACTTGGAGGCATaGGCAGAAGACCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: SWRSRARRSAIIWSCRVSDHLEA*AEDPLV
Trigger: GACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC...ACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CAA 90 bp GACCACTTGGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTGCGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: DHLEALAEDPLVRTSWHCVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...GCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CAA 90 bp GCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: AYPSSVEPDKLSHRTSCGVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...GCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp GGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATGTGAGGGGACTAACTaGGGCTTGTTCTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: GLTWACSPGGVVLGAQQSCEGTN*GLFSWR
Trigger: CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACA...TGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CAA 90 bp GGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTTGTGAGGGGACTAACTaGGGCTTGTTCTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: GAYPSSVEPDKLSHRTSCCEGTN*GLFSWR
Trigger: CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACA...ACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCACTGCTGCAGGACTCTTaGGATGGCTGTCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: IISRARQALPSDVLWLGPLLQDS*DGCLLI
Trigger: GATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAG...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp CTCTCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTGTCTTCAGTGCTCTaGGCCTGCACGTGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LSLPVWASNRRAPTSSLPVSSVL*ACTWRR
Trigger: TCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACAC...TGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCCGAGGAAGGCTGATCTaGAGAGGTCTGGCGGTCCTT +
Preference number: 5 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSRGRLI*RGLAVL
Trigger: AAGGACCGCCAGACCTCTCAAGATCAGCCTTCCTCG...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CAA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCGAGGAAGGCTGATCTaGAGAGGTCTGGCGGTCCTT +
Preference number: 5 (lower is better)
Translates to: GLSIISRARQALPSDVLWRGRLI*RGLAVL
Trigger: AAGGACCGCCAGACCTCTCAAGATCAGCCTTCCTCG...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCAGTTGGCCTGCCTCTaGGAATTAGTGCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: GLSIISRARQALPSDVLWQLACL*ELVLPG
Trigger: CCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTG...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp CACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCAGCATGGCTAGTCGCTaGGCCAGGGCCAGAATCCGT +
Preference number: 5 (lower is better)
Translates to: HQGSGRGLSIISRARQALSMASR*ARARIR
Trigger: ACGGATTCTGGCCCTGGCCAAGCGACTAGCCATGCT...GAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS TCA 90 bp TCTCTGTGGAACAAAGGGATACAAGTCAGGGATCCAGGCAGCCCTTaGGCTCTCGCACAGAACATTCCACCTGCACCCACCGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SLWNKGIQVRDPGSP*ALAQNIPPAPTGSS
Trigger: GCTGCTTCCGGTGGGTGCAGGTGGAATGTTCTGTGCGAGAGCTCAAGGGCTGCCTGGATCCCTGACTTGTATCCCTTTGTTCCACAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 90 bp AGGAGAATCAGAGAGACAGGGCAGAGCCGATGCCTCCTCTGCTCTTaGAGAGATGGAGGGAGGCTTGGCTCAGGATGGGCTAACAATAGC +
Preference number: 5 (lower is better)
Translates to: RRIRETGQSRCLLCS*RDGGRLGSGWANNS
Trigger: GCTATTGTTAGCCCATCCTGAGCCAAGCCTCCCTCCATCTCTGCAAGAGCAGAGGAGGCATCGGCTCTGCCCTGTCTCTCTGATTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 90 bp GGCTGGCCAGATGCCCACTGCCATACTTGGCTGAACTTTCACCCATaGCTGCCTCTTACCTGGTCAGGACCTCATGGCATTGCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: GWPDAHCHTWLNFHP*LPLTWSGPHGIACR
Trigger: TCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGAGGCAGGCATGGGTGAAAGTTCAGCCAAGTATGGCAGTGGGCATCTGGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 90 bp TCTCGCGACAGAGTACAAAGCTGTGAGGGCTGGCCAGATGCCCACTaGCATACTTGGCTGAACTTTCACCCATGCCTGCCTCTTACCTGG +
Preference number: 5 (lower is better)
Translates to: SRDRVQSCEGWPDAH*HTWLNFHPCLPLTW
Trigger: CCAGGTAAGAGGCAGGCATGGGTGAAAGTTCAGCCAAGTATGGCAGTGGGCATCTGGCCAGCCCTCACAGCTTTGTACTCTGTCGCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 90 bp ACACGCCTGGTCAGGACCTCATGGCATTGCTTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGCACTGCTGCACTGAAGCTTAGGCAG +
Preference number: 5 (lower is better)
Translates to: TRLVRTSWHCLQTFC*VFPVRGTAALKLRQ
Trigger: CTGCCTAAGCTTCAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561617.1
CDS CCA 90 bp GACTCTTTGGATGGCTGTCTCCTCATCCTCGTCGTCATCACTGTCTaGGAGGCGATAGTCCTGGAGGGTCACTTGAAGAGGGAGACCTGG +
Preference number: 5 (lower is better)
Translates to: DSLDGCLLILVVITV*EAIVLEGHLKRETW
Trigger: CCAGGTCTCCCTCTTCAAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGATGACGACGAGGATGAGGAGACAGCCATCCAAAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566407.5
CDS-3UTR CAA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCCTTGCAGACTTTCTGTaGGGTGTTCCCAGTCCGAGG +
Preference number: 5 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVLADFL*GVPSPR
Trigger: CCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAG...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCGACCACTTGGAGGCATaGGCAGAAGACCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: HQGSGRGLSIISRARQALDHLEA*AEDPLV
Trigger: GACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC...GAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGACCACTTGGAGGCATaGGCAGAAGACCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: LSIISRARQALPSDVLWLDHLEA*AEDPLV
Trigger: GACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC...CAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCAGACCACTTGGAGGCATaGGCAGAAGACCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: HTLLDPLSARGGACALEPDHLEA*AEDPLV
Trigger: GACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CAA 90 bp TCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: SGLLIGGPRLLPSQSFSRVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...TCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGAGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: FQGHQGSGRGLSIISRARVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...TCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp ATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAAGCAATCATCTGGTCTaGTCGTGTCAGTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: IISRARQALPSDVLWLGPSNHLV*SCQSLA
Trigger: AGCCAGGGACTGACACGACAAGACCAGATGATTGCT...TGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp GGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCAGCAATCATCTGGTCTaGTCGTGTCAGTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: GAQQSSGLVVSVPGSGKCSNHLV*SCQSLA
Trigger: AGCCAGGGACTGACACGACAAGACCAGATGATTGCT...GCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CAA 90 bp GGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCAGCAATCATCTGGTCTaGTCGTGTCAGTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: GVVLGAQQSSGLVVSVPGSNHLV*SCQSLA
Trigger: AGCCAGGGACTGACACGACAAGACCAGATGATTGCT...GCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CAA 90 bp TCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAGGGACTAACTTGGGCTaGTTCTCCTGGCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: SGLLIGGPRLLPSQSFSRGTNLG*FSWRSR
Trigger: ACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCC...TCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGGGACTAACTTGGGCTaGTTCTCCTGGCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: LFSWRSRARRSAIIWSCRGTNLG*FSWRSR
Trigger: ACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCC...ACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
ENST00000569057.5
CDS-3UTR CAA 90 bp GAGCTGCTGCAGGACTCTTTGGATGGCTGTCTCCTCATCCTCGTCGTCATCACTGGGACTAACTTGGGCTaGTTCTCCTGGCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: ELLQDSLDGCLLILVVITGTNLG*FSWRSR
Trigger: ACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCC...AGTGATGACGACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CAA 90 bp TGCTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCACTGAAGTGTGAGGGGACTAACTaGGGCTTGTTCTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: CLQTFCWVFPVRGTAALKCEGTN*GLFSWR
Trigger: CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACA...CTTCAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CAA 90 bp GTGACCACTTGGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGCATTTGTGAGGGGACTAACTaGGGCTTGTTCTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: VTTWRHWQKTLWSGPHGICEGTN*GLFSWR
Trigger: CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACA...AATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CAA 90 bp GAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCTGTGTCTGCTGGGCTaGGGTCCTGGTGTCCGGTGT +
Preference number: 5 (lower is better)
Translates to: ESFLIPGTPRLRKGPIHHLCLLG*GPGVRC
Trigger: ACACCGGACACCAGGACCCAAGCCCAGCAGACACAG...ATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACCTGCTGCAGGACTCTTaGGATGGCTGTCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: SRDTKAQEGAYPSSVEPDLLQDS*DGCLLI
Trigger: GATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAG...GTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCCTGCTGCAGGACTCTTaGGATGGCTGTCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSLLQDS*DGCLLI
Trigger: GATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAG...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTACTGCTGCAGGACTCTTaGGATGGCTGTCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: SLPVRGLTWACSPGGVVLLLQDS*DGCLLI
Trigger: GATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAG...TAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CAA 90 bp TCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTGTCTTCAGTGCTCTaGGCCTGCACGTGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: SGRGLSIISRARQALPSDVSSVL*ACTWRR
Trigger: TCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACAC...GTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGTGTCTTCAGTGCTCTaGGCCTGCACGTGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: HSRDTKAQEGAYPSSVEPVSSVL*ACTWRR
Trigger: TCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACAC...TGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGACGAGGAAGGCTGATCTaGAGAGGTCTGGCGGTCCTT +
Preference number: 5 (lower is better)
Translates to: SGLLIGGPRLLPSQSFSRRGRLI*RGLAVL
Trigger: AAGGACCGCCAGACCTCTCAAGATCAGCCTTCCTCG...TCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CAA 90 bp TCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAAATCCTCCAAGGACCAGTaGGCCTGCCTCTTGGAATTA +
Preference number: 5 (lower is better)
Translates to: SVEPDKLSHRTSCGWAQKSSKDQ*ACLLEL
Trigger: TAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGA...TTTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp GCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCTGACCACTTGGAGGCATaGGCAGAAGACCCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: ALSNHLVLSCQSLALGSADHLEA*AEDPLL
Trigger: AAGGAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTC...AGCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569057.5
CDS TCA 90 bp TACAAAGCTGTGAGGGCTGGCCAGATGCCCACTGCCATACTTGGCTaGACTTTCACCCATGCCTGCCTCTTACCTGGTCAGGACCTCATG +
Preference number: 5 (lower is better)
Translates to: YKAVRAGQMPTAILG*TFTHACLLPGQDLM
Trigger: CATGAGGTCCTGACCAGGTAAGAGGCAGGCATGGGTGAAAGTTCAGCCAAGTATGGCAGTGGGCATCTGGCCAGCCCTCACAGCTTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 90 bp CTTTCACCCATGCCTGCCTCTTACCTGGTCAGGACCTCATGGCATTaGTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCT +
Preference number: 5 (lower is better)
Translates to: LSPMPASYLVRTSWH*LQTFCWVFPVRGTA
Trigger: AGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGAGGCAGGCATGGGTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS-3UTR CAA 90 bp ATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGGGCCCAGAACAGCCGTACTCCTTCTaGAAGAGGGTGAACTTGACA +
Preference number: 5 (lower is better)
Translates to: ISRARQALPSDVLWLGPEQPYSF*KRVNLT
Trigger: TGTCAAGTTCACCCTCTTCAAGAAGGAGTACGGCTG...TTCTGGGCCCAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299173.14
ENST00000355341.8
ENST00000570108.5
CDS-3UTR CAA 90 bp TGCCCTAGAGCCAGGTTACAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: CPRARLQGSPVDSVWSLPTSWHC*QTFCWV
Trigger: CACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGT...GGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTGTAACCTGGCTCTAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp GGTGGTGACCACTTGGAGGCATTGGCAGAAGACCCTCTGGTCAGGACCTCATGGACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GGDHLEALAEDPLVRTSWTSWHC*QTFCWV
Trigger: CACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGT...CCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CAA 90 bp GGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCTTGTCGTGTCAGTCCCTGGCCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: GVVLGAQQSSGLVVSVPGQDLMA*LADFLL
Trigger: CAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTG...GCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CAA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: QHTLLDPLSARGGACALEVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CAA 90 bp TCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAGCAATCATCTGGTCTaGTCGTGTCAGTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SRDTKAQEGAYPSSVEPDSNHLV*SCQSLA
Trigger: AGCCAGGGACTGACACGACAAGACCAGATGATTGCT...GTCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TCAAGTGCTGCCTCAGCCAGCAGTCTGCTCTTCTCCTCCTCCAAGGACCAGTTGAGCAATCATCTGGTCTaGTCGTGTCAGTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SSAASASSLLFSSSKDQLSNHLV*SCQSLA
Trigger: AGCCAGGGACTGACACGACAAGACCAGATGATTGCT...CAACTGGTCCTTGGAGGAGGAGAAGAGCAGACTGCTGGCTGAGGCAGCACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561768.5
ENST00000569057.5
CDS-3UTR CAA 90 bp GCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGGGACTAACTTGGGCTaGTTCTCCTGGCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: ASNRRAPTSSLPVILSNGGTNLG*FSWRSR
Trigger: ACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCC...TCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCTGTGTCTGCTGGGCTaGGGTCCTGGTGTCCGGTGT +
Preference number: 5 (lower is better)
Translates to: APTSSLPVILSNGESFLILCLLG*GPGVRC
Trigger: ACACCGGACACCAGGACCCAAGCCCAGCAGACACAG...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CAACATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCAGTTGGCCTGCCTCTaGGAATTAGTGCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: QHTLLDPLSARGGACALEQLACL*ELVLPG
Trigger: CCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTG...CTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CAA 90 bp TCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGCAGTTGGCCTGCCTCTaGGAATTAGTGCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SFLIPGTPRLRKGPIHHQQLACL*ELVLPG
Trigger: CCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTG...CTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CTCCAAGGACCAGTTGGCCTGCCTCTTGGAATTAGTGCTCCCTGGGCCACCCTGAAGACCCTCTCCTTCTaGAAGAGGGTGAACTTGACA +
Preference number: 5 (lower is better)
Translates to: LQGPVGLPLGISAPWATLKTLSF*KRVNLT
Trigger: TGTCAAGTTCACCCTCTTCAAGAAGGAGAGGGTCTT...CAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569057.5
CDS TCA 90 bp TGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCACTaGAGCTTAGGCAGCCTGAACAGAAGGCCCTGCCACAATTCTTAC +
Preference number: 5 (lower is better)
Translates to: CRLSVGCSQSEALLH*SLGSLNRRPCHNSY
Trigger: GTAAGAATTGTGGCAGGGCCTTCTGTTCAGGCTGCCTAAGCTTCAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000560078.1
ENST00000561617.1
ENST00000561768.5
ENST00000564258.5
ENST00000566407.5
ENST00000566767.1
ENST00000568062.5
ENST00000570108.5
CDS TCA 90 bp CCATCTAGTTCCCATCATCTCCTGGTCAGAATCCCTGGCCACAACTaGGGCAGAGGGAACCTGCAGTTTACCAGAGGAATCTGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: PSSSHHLLVRIPGHN*GRGNLQFTRGIWQV
Trigger: GACCTGCCAGATTCCTCTGGTAAACTGCAGGTTCCCTCTGCCTCAGTTGTGGCCAGGGATTCTGACCAGGAGATGATGGGAACTAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 90 bp TCTTACCTGGTCAGGACCTCATGGCATTGCTTGCAGACTTTCTGTTaGGTGTTCCCAGTCCGAGGCACTGCTGCACTGAAGCTTAGGCAG +
Preference number: 5 (lower is better)
Translates to: SYLVRTSWHCLQTFC*VFPVRGTAALKLRQ
Trigger: CTGCCTAAGCTTCAGTGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS-3UTR CAA 90 bp TGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCACTTGCAGACTTTCTGTaGGGTGTTCCCAGTCCGAGG +
Preference number: 5 (lower is better)
Translates to: WRIFPHSRDTKAQEGAYPLADFL*GVPSPR
Trigger: CCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAG...TGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp GGCCTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GLSIISRARQALPSDVLWTSWHC*QTFCWV
Trigger: CACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGT...CCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp TCACTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SLPVWASNRRAPTSSLPVQDLMA*LADFLL
Trigger: CAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTG...GACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp ACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGGTCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: TWACSPGGVVLGAQQSSGQDLMA*LADFLL
Trigger: CAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTG...ACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CAA 90 bp CTATCCATCATCAGTAGAGCCAGACAAGCTCTCCCATCGGACGTCCTGTGGCTGAGCAATCATCTGGTCTaGTCGTGTCAGTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LSIISRARQALPSDVLWLSNHLV*SCQSLA
Trigger: AGCCAGGGACTGACACGACAAGACCAGATGATTGCT...CAGCCACAGGACGTCCGATGGGAGAGCTTGTCTGGCTCTACTGATGATGGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
ENST00000570108.5
CDS-3UTR CAA 90 bp ATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTGGGACTAACTTGGGCTaGTTCTCCTGGCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: IGGPRLLPSQSFSRMENLGTNLG*FSWRSR
Trigger: ACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCC...AAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGCTGCTGCAGGACTCTTaGGATGGCTGTCTCCTCATC +
Preference number: 5 (lower is better)
Translates to: SFLIPGTPRLRKGPIHHQLLQDS*DGCLLI
Trigger: GATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAG...CTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCAGCCGTACTCCTTCTaGAAGAGGGTGAACTTGACA +
Preference number: 5 (lower is better)
Translates to: LPVWASNRRAPTSSLPVIQPYSF*KRVNLT
Trigger: TGTCAAGTTCACCCTCTTCAAGAAGGAGTACGGCTG...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS-3UTR CAA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCACAGCCGTACTCCTTCTaGAAGAGGGTGAACTTGACA +
Preference number: 5 (lower is better)
Translates to: HTLLDPLSARGGACALEPQPYSF*KRVNLT
Trigger: TGTCAAGTTCACCCTCTTCAAGAAGGAGTACGGCTG...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS-3UTR CAA 90 bp CTTCCAGTCTGGGCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: LPVWASNRRAPTSSLPVITSWHC*QTFCWV
Trigger: CACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGT...AATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGCCCAGACTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CATACTTTATTAGACCCACTAAGTGCCAGGGGAGGGGCCTGTGCCCTAGAGCCAACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: HTLLDPLSARGGACALEPTSWHC*QTFCWV
Trigger: CACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGT...TGGCTCTAGGGCACAGGCCCCTCCCCTGGCACTTAGTGGGTCTAATAAAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CAA 90 bp TTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCATCAGTAGAGCCAGACAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: FQGHQGSGRGLSIISRARQDLMA*LADFLL
Trigger: CAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTG...TCTGGCTCTACTGATGATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: LEWRIFPHSRDTKAQEGAQDLMA*LADFLL
Trigger: CAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTG...GGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp GCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: APTSSLPVILSNGESFLIVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...AATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAATGTGAGGGGACTAACTaGGGCTTGTTCTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQCEGTN*GLFSWR
Trigger: CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACA...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCGTGTCTTCAGTGCTCTaGGCCTGCACGTGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: FPPSHSLEWRIFPHSRDTVSSVL*ACTWRR
Trigger: TCTCCTCCACGTGCAGGCCAAGAGCACTGAAGACAC...GGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCCGAGGAAGGCTGATCTaGAGAGGTCTGGCGGTCCTT +
Preference number: 5 (lower is better)
Translates to: FPPSHSLEWRIFPHSRDTRGRLI*RGLAVL
Trigger: AAGGACCGCCAGACCTCTCAAGATCAGCCTTCCTCG...GGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000564258.5
CDS-3UTR CAA 90 bp GCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGATCCTCCAAGGACCAGTaGGCCTGCCTCTTGGAATTA +
Preference number: 5 (lower is better)
Translates to: ASNRRAPTSSLPVILSNGSSKDQ*ACLLEL
Trigger: TAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGA...TCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp TGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCACGCGCGCTTAGACTCTaGGGAGTTGTAGTACGAATC +
Preference number: 5 (lower is better)
Translates to: WRIFPHSRDTKAQEGAYPRALRL*GVVVRI
Trigger: GATTCGTACTACAACTCCCAAGAGTCTAAGCGCGCG...TGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355341.8
ENST00000564258.5
CDS CCA 90 bp CACTGCCATACTTGGCTGAACTTTCACCCATGCCTGCCTCTTACCTaGTCAGGACCTCATGGCATTGCTTGCAGACTTTCTGTTGGGTGT +
Preference number: 5 (lower is better)
Translates to: HCHTWLNFHPCLPLT*SGPHGIACRLSVGC
Trigger: ACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGAGGCAGGCATGGGTGAAAGTTCAGCCAAGTATGGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS-3UTR CAA 90 bp GCTTCTAATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: ASNRRAPTSSLPVILSNGTSWHC*QTFCWV
Trigger: CACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGT...TCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTATTAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp AGGCTGCCACACGCTTCTTATAGTTCTGAGGTGGTGACCACTTGGAGGCATTGGACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: RLPHASYSSEVVTTWRHWTSWHC*QTFCWV
Trigger: CACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGT...CCAATGCCTCCAAGTGGTCACCACCTCAGAACTATAAGAAGCGTGTGGCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561768.5
ENST00000567756.5
ENST00000568062.5
CDS-3UTR CAA 90 bp GGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGGAAGGGGCCTATCCATCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: GESFLIPGTPRLRKGPIHQDLMA*LADFLL
Trigger: CAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTG...ATGGATAGGCCCCTTCCTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGTGCTGGGCTTTTGCTaGGCTTCCAAGGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: PTSSLPVILSNGESFLIPVLGFC*ASKAAT
Trigger: TGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCAC...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCATGTGAGGGGACTAACTaGGGCTTGTTCTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: PTSSLPVILSNGESFLIPCEGTN*GLFSWR
Trigger: CCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACA...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp ATAGGAGGGCCCCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCCAAGGACCAGTaGGCCTGCCTCTTGGAATTA +
Preference number: 5 (lower is better)
Translates to: IGGPRLLPSQSFSRMENLSSKDQ*ACLLEL
Trigger: TAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGA...AAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGGGGCCCTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp AGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAGGCTCAGAGGAGCTGGGGTCCTTaGCCAGTAAGGCAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: SHSLEWRIFPHSRDTKAQRSWGP*PVRQEA
Trigger: TGCTTCCTGCCTTACTGGCAAAGGACCCCAGCTCCT...CTGAGCCTTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS-3UTR CAA 90 bp TCTCTGCCTGTGAGGGGACTAACTTGGGCTTGTTCTCCTGGCGGAGTCGTGCTACATAAACCCTCCTTCTaGAAGAGGGTGAACTTGACA +
Preference number: 5 (lower is better)
Translates to: SLPVRGLTWACSPGGVVLHKPSF*KRVNLT
Trigger: TGTCAAGTTCACCCTCTTCAAGAAGGAGGGTTTATG...TAGCACGACTCCGCCAGGAGAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568062.5
CDS-3UTR CAA 90 bp CCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAGGGACACCAAAGCAATCATCTGGTCTaGTCGTGTCAGTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: PSQSFSRMENLSSFQGHQSNHLV*SCQSLA
Trigger: AGCCAGGGACTGACACGACAAGACCAGATGATTGCT...TTGGTGTCCCTGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS GCA 90 bp CAGAGCTCAGATTTGAACGCTGACTCCAAAATCCAGGTTGGTGAATaGTGCACGGTCCTGCCTTCCTGCGTGACACTAATTTACTCCATC +
Preference number: 5 (lower is better)
Translates to: QSSDLNADSKIQVGE*CTVLPSCVTLIYSI
Trigger: GATGGAGTAAATTAGTGTCACGCAGGAAGGCAGGACCGTGCAGCATTCACCAACCTGGATTTTGGAGTCAGCGTTCAAATCTGAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 90 bp TGCACTGTGGACTTAGCTTCTCAAACTCATCTTTTTCTTTACTTGTaGCCTGTGGCTGCTGATTCCCTATCTCCAGGGACCAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: CTVDLASQTHLFLYL*PVAADSLSPGTSGQ
Trigger: CTGCCCACTGGTCCCTGGAGATAGGGAATCAGCAGCCACAGGCCACAAGTAAAGAAAAAGATGAGTTTGAGAAGCTAAGTCCACAGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS-3UTR CAA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCAAGCAATCATCTGGTCTaGTCGTGTCAGTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: PTSSLPVILSNGESFLIPSNHLV*SCQSLA
Trigger: AGCCAGGGACTGACACGACAAGACCAGATGATTGCT...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299173.14
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCATCCTCCAAGGACCAGTaGGCCTGCCTCTTGGAATTA +
Preference number: 5 (lower is better)
Translates to: PTSSLPVILSNGESFLIPSSKDQ*ACLLEL
Trigger: TAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGA...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336455.9
ENST00000355341.8
ENST00000561768.5
ENST00000564258.5
CDS-3UTR CAA 90 bp CCGACTTCTTCCCTCCCAGTCATTCTCTCGAATGGAGAATCTTTCCTCATTCCACGCGCGCTTAGACTCTaGGGAGTTGTAGTACGAATC +
Preference number: 5 (lower is better)
Translates to: PTSSLPVILSNGESFLIPRALRL*GVVVRI
Trigger: GATTCGTACTACAACTCCCAAGAGTCTAAGCGCGCG...TGGAATGAGGAAAGATTCTCCATTCGAGAGAATGACTGGGAGGGAAGAAGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355341.8
ENST00000564258.5
CDS GCA 90 bp ACTCCCCTGCTTCAGGCCCAGGCCCTCCATCTCCCAGTATTTCTGTaGACTGTGGACTTAGCTTCTCAAACTCATCTTTTTCTTTACTTG +
Preference number: 5 (lower is better)
Translates to: TPLLQAQALHLPVFL*TVDLASQTHLFLYL
Trigger: CAAGTAAAGAAAAAGATGAGTTTGAGAAGCTAAGTCCACAGTGCACAGAAATACTGGGAGATGGAGGGCCTGGGCCTGAAGCAGGGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS-3UTR CAA 90 bp CAGGGCTCACCCGTAGATTCAGTCTGGTCTCTCCCCATCATGCCTCTCACTTCCTGGAGCACAGTTGAGTaGAATGAATACATGTTTACT +
Preference number: 5 (lower is better)
Translates to: QGSPVDSVWSLPIMPLTSWSTVE*NEYMFT
Trigger: AGTAAACATGTATTCATTCAACTCAACTGTGCTCCA...GGAAGTGAGAGGCATGATGGGGAGAGACCAGACTGAATCTACGGGTGAGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355341.8
CDS TCA 90 bp TTAAACACTAGGCTTACACTGGCTCCCTTTGGAGTAAGCACTCAATaGATGGTAACTCTTATAACGTTGATCACTCTCCGATTTATATTC +
Preference number: 5 (lower is better)
Translates to: LNTRLTLAPFGVSTQ*MVTLITLITLRFIF
Trigger: GAATATAAATCGGAGAGTGATCAACGTTATAAGAGTTACCATTCATTGAGTGCTTACTCCAAAGGGAGCCAGTGTAAGCCTAGTGTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570162.1
CDS GCA 72 bp CGCCGCGACCTAGAGCAGGGAATCCGGACGCTCTCCTaGAGCCAGCGTACGGCAGCGGCGGCAACGGGGGCT +
Preference number: 6 (lower is better)
Translates to: RRDLEQGIRTLS*SQRTAAAATGA
Trigger: AGCCCCCGTTGCCGCCGCTGCCGTACGCTGGCTGCAGGAGAGCGTCCGGATTCCCTGCTCTAGGTCGCGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299173.14
ENST00000355341.8
CDS GCA 72 bp ACAGCCGTACTAGAGCAGGGAATCCGGACGCTCTCCTaGAGCCAGCGTACGGCAGCGGCGGCAACGGGGGCT +
Preference number: 6 (lower is better)
Translates to: TAVLEQGIRTLS*SQRTAAAATGA
Trigger: AGCCCCCGTTGCCGCCGCTGCCGTACGCTGGCTGCAGGAGAGCGTCCGGATTCCCTGCTCTAGTACGGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564258.5
CDS GCA 72 bp CCTACTCTCCATGGTGGCTCCCAGCACCGCAGGGTCTaGAGAGCTGAGATCACGCCGGCCAAGTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: PTLHGGSQHRRV*RAEITPAKSWA
Trigger: GGCCCAGGACTTGGCCGGCGTGATCTCAGCTCTGCAGACCCTGCGGTGCTGGGAGCCACCATGGAGAGTAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299173.14
ENST00000355341.8
ENST00000563530.1
ENST00000566407.5
ENST00000567756.5
ENST00000568062.5
CDS GCA 72 bp CCTGGACTGTGTCCTCTAGGCAACCCCATCTGCCCCTaGTCACTGGGCTTGTTCTCCTGGCGGAGTCGTGCT +
Preference number: 6 (lower is better)
Translates to: PGLCPLGNPICP*SLGLFSWRSRA
Trigger: AGCACGACTCCGCCAGGAGAACAAGCCCAGTGAGCAGGGGCAGATGGGGTTGCCTAGAGGACACAGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 72 bp AGGCAGCCCTTGAGCTCTCGCACAGAACATTCCACCTaGACCCACCGGAAGCAGCGGGCACAGAAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: RQPLSSRTEHST*THRKQRAQKRS
Trigger: GGACCTCTTCTGTGCCCGCTGCTTCCGGTGGGTGCAGGTGGAATGTTCTGTGCGAGAGCTCAAGGGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CAA 90 bp GGACTGTGTCCTCTAGGCAACCCCATCTGCCCCTGCTCACTGGGCTaGTTCTCCTGGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGG +
Preference number: 6 (lower is better)
Translates to: GLCPLGNPICPCSLG*FSWRSRARRSAIIW
Trigger: CCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAGTGAGCAGGGGCAGATGGGGTTGCCTAGAGGACACAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 72 bp AGAAGCCCTGGACTGTGTCCTCTAGGCAACCCCATCTaGCCCTGCTCACTGGGCTTGTTCTCCTGGCGGAGT +
Preference number: 6 (lower is better)
Translates to: RSPGLCPLGNPI*PCSLGLFSWRS
Trigger: ACTCCGCCAGGAGAACAAGCCCAGTGAGCAGGGGCAGATGGGGTTGCCTAGAGGACACAGTCCAGGGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 72 bp AACCCCATCTGCCCCTGCTCACTGGGCTTGTTCTCCTaGCGGAGTCGTGCTAGGCGCTCAGCAATCATCTGG +
Preference number: 6 (lower is better)
Translates to: NPICPCSLGLFS*RSRARRSAIIW
Trigger: CCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGAGAACAAGCCCAGTGAGCAGGGGCAGATGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 72 bp GCTGATTCCCTATCTCCAGGGACCAGTGGGCAGGTCTaGGTCTGGGTCACAGGAGGGGGCCCAAAGAGAACA +
Preference number: 6 (lower is better)
Translates to: ADSLSPGTSGQV*VWVTGGGPKRT
Trigger: TGTTCTCTTTGGGCCCCCTCCTGTGACCCAGACCCAGACCTGCCCACTGGTCCCTGGAGATAGGGAATCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CAA 90 bp CTGGTCTTGTCGTGTCAGTCCCTGGCTCTGGGAAGTGCTGGGCTTTaGCTTGGCTTCCAAGGCTGCCACACGCCTGGTCAGGACCTCATG +
Preference number: 6 (lower is better)
Translates to: LVLSCQSLALGSAGL*LGFQGCHTPGQDLM
Trigger: CATGAGGTCCTGACCAGGCGTGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCACTTCCCAGAGCCAGGGACTGACACGACAAGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561617.1
CDS CAA 72 bp GCTGCCACACGCCTGGTCAGGACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGC +
Preference number: 6 (lower is better)
Translates to: AATRLVRTSWHC*QTFCWVFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGCGTGTGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561617.1
CDS TCA 72 bp ATCCAGGGAAGCTTCTTCAGTGAGCTGCGGACAGGGTaGAGATGTACTACTCCCCTGCTTCAGGCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: IQGSFFSELRTG*RCTTPLLQAQA
Trigger: GGCCTGGGCCTGAAGCAGGGGAGTAGTACATCTTCACCCTGTCCGCAGCTCACTGAAGAAGCTTCCCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560078.1
ENST00000563497.1
CDS TCA 72 bp GAAGATTTCAGAGCAGAGGGAGTAACGGGCTTGGTGTaGTGGACACCGCGCTTCGGAGGAGCAGGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: EDFRAEGVTGLV*WTPRFGGAGWR
Trigger: TCTCCACCCTGCTCCTCCGAAGCGCGGTGTCCATCACACCAAGCCCGTTACTCCCTCTGCTCTGAAATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS TCA 72 bp GTGAGGGCTGGCCAGATGCCCACTGCCATACTTGGCTaGACTTTCACCCATGCCTGCCTCTTACCTGGTCAG +
Preference number: 6 (lower is better)
Translates to: VRAGQMPTAILG*TFTHACLLPGQ
Trigger: CTGACCAGGTAAGAGGCAGGCATGGGTGAAAGTTCAGCCAAGTATGGCAGTGGGCATCTGGCCAGCCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 72 bp CTGCCACACGCCTGGTCAGGACCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCA +
Preference number: 6 (lower is better)
Translates to: LPHAWSGPHGIA*RLSVGCSQSEA
Trigger: TGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGCGTGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561617.1
CDS GCA 72 bp GTGAGCTGCGGACAGGGTGAAGATGTACTACTCCCCTaGTTCAGGCCCAGGCCCTCCATCTCCCAGTATTTC +
Preference number: 6 (lower is better)
Translates to: VSCGQGEDVLLP*FRPRPSISQYF
Trigger: GAAATACTGGGAGATGGAGGGCCTGGGCCTGAAGCAGGGGAGTAGTACATCTTCACCCTGTCCGCAGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CAA 72 bp ATCACTGTCTGGGAGGCGATAGTCCTGGAGGGTCACTaGAAGAGGGAGACCTGGGCCTCCTCCTTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: ITVWEAIVLEGH*KRETWASSFPA
Trigger: AGCTGGAAAGGAGGAGGCCCAGGTCTCCCTCTTCAAGTGACCCTCCAGGACTATCGCCTCCCAGACAGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566407.5
CDS CAA 90 bp TCACCCATGCCTGCCTCTTACCTGGTCAGGACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGCTGCA +
Preference number: 6 (lower is better)
Translates to: SPMPASYLVRTSWHC*QTFCWVFPVRGTAA
Trigger: TGCAGCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGAGGCAGGCATGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CAA 90 bp CTCTCTGTGGAACAAAGGGATACAAGTCAGGGATCCAGGCAGCCCTaGAGCTCTCGCACAGAACATTCCACCTGCACCCACCGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: LSVEQRDTSQGSRQP*SSRTEHSTCTHRKQ
Trigger: CTGCTTCCGGTGGGTGCAGGTGGAATGTTCTGTGCGAGAGCTCAAGGGCTGCCTGGATCCCTGACTTGTATCCCTTTGTTCCACAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 72 bp AAGGCTGCCACACGCCTGGTCAGGACCTCATGGCATTaGTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGA +
Preference number: 6 (lower is better)
Translates to: KAATRLVRTSWH*LQTFCWVFPVR
Trigger: TCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGCGTGTGGCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561617.1
CDS CCA 72 bp GGTAATCCAGGCCCACCTGCTGCAGGACTCTTTGGATaGCTGTCTCCTCATCCTCGTCGTCATCACTGTCTG +
Preference number: 6 (lower is better)
Translates to: GNPGPPAAGLFG*LSPHPRRHHCL
Trigger: CAGACAGTGATGACGACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAGGTGGGCCTGGATTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CAA 72 bp CCTGCCTCTTACCTGGTCAGGACCTCATGGCATTGCTaGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGC +
Preference number: 6 (lower is better)
Translates to: PASYLVRTSWHC*QTFCWVFPVRG
Trigger: GCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CAA 72 bp AGGTGGGTAATCCAGGCCCACCTGCTGCAGGACTCTTaGGATGGCTGTCTCCTCATCCTCGTCGTCATCACT +
Preference number: 6 (lower is better)
Translates to: RWVIQAHLLQDS*DGCLLILVVIT
Trigger: AGTGATGACGACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAGGTGGGCCTGGATTACCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CAA 90 bp ACTTTCACCCATGCCTGCCTCTTACCTGGTCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCACTGC +
Preference number: 6 (lower is better)
Translates to: TFTHACLLPGQDLMA*LADFLLGVPSPRHC
Trigger: GCAGTGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGAGGCAGGCATGGGTGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS GCA 72 bp CTGCCTCTTACCTGGTCAGGACCTCATGGCATTGCTTaGAGACTTTCTGTTGGGTGTTCCCAGTCCGAGGCA +
Preference number: 6 (lower is better)
Translates to: LPLTWSGPHGIA*RLSVGCSQSEA
Trigger: TGCCTCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 72 bp AGCAGGAGGAAGTGTGGTAATCTAACTCCAGCGACCTaGAGAAGGGCAGGCTGCGGGATGGGGAAGATTTCA +
Preference number: 6 (lower is better)
Translates to: SRRKCGNLTPAT*RRAGCGMGKIS
Trigger: TGAAATCTTCCCCATCCCGCAGCCTGCCCTTCTCCAGGTCGCTGGAGTTAGATTACCACACTTCCTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CAA 72 bp CATGCCTGCCTCTTACCTGGTCAGGACCTCATGGCATaGCTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCG +
Preference number: 6 (lower is better)
Translates to: HACLLPGQDLMA*LADFLLGVPSP
Trigger: CGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGAGGCAGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CAA 72 bp GAACAAAGGGATACAAGTCAGGGATCCAGGCAGCCCTaGAGCTCTCGCACAGAACATTCCACCTGCACCCAC +
Preference number: 6 (lower is better)
Translates to: EQRDTSQGSRQP*SSRTEHSTCTH
Trigger: GTGGGTGCAGGTGGAATGTTCTGTGCGAGAGCTCAAGGGCTGCCTGGATCCCTGACTTGTATCCCTTTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS TCA 72 bp TCCCATCATCTCCTGGTCAGAATCCCTGGCCACAACTaGGGCAGAGGGAACCTGCAGTTTACCAGAGGAATC +
Preference number: 6 (lower is better)
Translates to: SHHLLVRIPGHN*GRGNLQFTRGI
Trigger: GATTCCTCTGGTAAACTGCAGGTTCCCTCTGCCTCAGTTGTGGCCAGGGATTCTGACCAGGAGATGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS TCA 72 bp CAAGGCTGCCACACGCTTCTTATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGCAGAAGACCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: QGCHTLLIVLRW*PLGGIGRRPSP
Trigger: AGGAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTCAGAACTATAAGAAGCGTGTGGCAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569057.5
CDS GCA 72 bp ATGCCTGCCTCTTACCTGGTCAGGACCTCATGGCATTaGTTGCAGACTTTCTGTTGGGTGTTCCCAGTCCGA +
Preference number: 6 (lower is better)
Translates to: MPASYLVRTSWH*LQTFCWVFPVR
Trigger: TCGGACTGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGAGGCAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS TCA 72 bp CAAGGCTGCCACACGCTTCTTATAGTTCTGAGGTGGTaGCCACTTGGAGGCATTGGCAGAAGACCCTCTACA +
Preference number: 6 (lower is better)
Translates to: QGCHTLLIVLRW*PLGGIGRRPST
Trigger: TGTAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTCAGAACTATAAGAAGCGTGTGGCAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS TCA 72 bp AACTCATCTTTTTCTTTACTTGTGGCCTGTGGCTGCTaGTTCCCTATCTCCAGGGACCAGTGGGCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: NSSFSLLVACGC*FPISRDQWAGL
Trigger: CAGACCTGCCCACTGGTCCCTGGAGATAGGGAATCAGCAGCCACAGGCCACAAGTAAAGAAAAAGATGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 72 bp ACTTGGCTGAACTTTCACCCATGCCTGCCTCTTACCTaGTCAGGACCTCATGGCATTGCTTGCAGACTTTCT +
Preference number: 6 (lower is better)
Translates to: TWLNFHPCLPLT*SGPHGIACRLS
Trigger: AGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGGTAAGAGGCAGGCATGGGTGAAAGTTCAGCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 72 bp TGCTCTTTAAGCTCAAAGGCATCATGGCCCTCTCTGTaGAACAAAGGGATACAAGTCAGGGATCCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: CSLSSKASWPSL*NKGIQVRDPGS
Trigger: GCTGCCTGGATCCCTGACTTGTATCCCTTTGTTCCACAGAGAGGGCCATGATGCCTTTGAGCTTAAAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 72 bp CCACACGCTTCTTATAGTTCTGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACCCTCTCCTTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: PHASYSSEVVTT*RHWQKTLSFLK
Trigger: CTTCAAGAAGGAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTCAGAACTATAAGAAGCGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569057.5
CDS CAA 90 bp CTGTGCACTGTGGACTTAGCTTCTCAAACTCATCTTTTTCTTTACTaGTGGCCTGTGGCTGCTGATTCCCTATCTCCAGGGACCAGTGGG +
Preference number: 6 (lower is better)
Translates to: LCTVDLASQTHLFLY*WPVAADSLSPGTSG
Trigger: CCCACTGGTCCCTGGAGATAGGGAATCAGCAGCCACAGGCCACAAGTAAAGAAAAAGATGAGTTTGAGAAGCTAAGTCCACAGTGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS TCA 72 bp CCAGGGACTCTCCAAGCACACACAGAGAGAAGTCACTaGAGTTATGACCAGCTCCTTCTTGAAGAGGGTGAA +
Preference number: 6 (lower is better)
Translates to: PGTLQAHTERSH*SYDQLLLEEGE
Trigger: TTCACCCTCTTCAAGAAGGAGCTGGTCATAACTTCAGTGACTTCTCTCTGTGTGTGCTTGGAGAGTCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563530.1
CDS GCA 72 bp TTGAACGCTGACTCCAAAATCCAGGTTGGTGAATGCTaGACGGTCCTGCCTTCCTGCGTGACACTAATTTAC +
Preference number: 6 (lower is better)
Translates to: LNADSKIQVGEC*TVLPSCVTLIY
Trigger: GTAAATTAGTGTCACGCAGGAAGGCAGGACCGTGCAGCATTCACCAACCTGGATTTTGGAGTCAGCGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 72 bp CCACACGCTTCTTATAGTTCTGAGGTGGTGACCACTTaGAGGCATTGGCAGAAGACCCTCTACAGAGAAGAA +
Preference number: 6 (lower is better)
Translates to: PHASYSSEVVTT*RHWQKTLYREE
Trigger: TTCTTCTCTGTAGAGGGTCTTCTGCCAATGCCTCCAAGTGGTCACCACCTCAGAACTATAAGAAGCGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CCA 72 bp GCAGATGTCTGGTGCTCTTTAAGCTCAAAGGCATCATaGCCCTCTCTGTGGAACAAAGGGATACAAGTCAGG +
Preference number: 6 (lower is better)
Translates to: ADVWCSLSSKAS*PSLWNKGIQVR
Trigger: CCTGACTTGTATCCCTTTGTTCCACAGAGAGGGCCATGATGCCTTTGAGCTTAAAGAGCACCAGACATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS CAA 72 bp AAGGTCACCGCCTCAATAAGACAGCAGAGCTCAGATTaGAACGCTGACTCCAAAATCCAGGTTGGTGAATGC +
Preference number: 6 (lower is better)
Translates to: KVTASIRQQSSD*NADSKIQVGEC
Trigger: GCATTCACCAACCTGGATTTTGGAGTCAGCGTTCAAATCTGAGCTCTGCTGTCTTATTGAGGCGGTGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560078.1
CDS TCA 72 bp AGGCTTACACTGGCTCCCTTTGGAGTAAGCACTCAATaGATGGTAACTCTTATAACGTTGATCACTCTCCGA +
Preference number: 6 (lower is better)
Translates to: RLTLAPFGVSTQ*MVTLITLITLR
Trigger: TCGGAGAGTGATCAACGTTATAAGAGTTACCATTCATTGAGTGCTTACTCCAAAGGGAGCCAGTGTAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570162.1
CDS CAA 90 bp ACCTTCATTTTACACATGAGGAAAGTGAGACTTAGGTCAAGTAACTaGTCCAGCATCACACAGCTAATACGTGGTAGAAATGGGAATCAC +
Preference number: 6 (lower is better)
Translates to: TFILHMRKVRLRSSN*SSITQLIRGRNGNH
Trigger: GTGATTCCCATTTCTACCACGTATTAGCTGTGTGATGCTGGACAAGTTACTTGACCTAAGTCTCACTTTCCTCATGTGTAAAATGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570162.1
CDS TCA 72 bp CAATTCCTCGGTTTCCAGTACCTTATTCAAGCCAAATaGAGGTTTATACAAAATTCCCATGCTTTCTACCCT +
Preference number: 6 (lower is better)
Translates to: QFLGFQYLIQAK*RFIQNSHAFYP
Trigger: AGGGTAGAAAGCATGGGAATTTTGTATAAACCTTCATTTGGCTTGAATAAGGTACTGGAAACCGAGGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560078.1