Pregenerated sensors for ZFP28-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000267421Ensembl transcript IDs: ENST00000587920.5, ENST00000590579.5, ENST00000590613.1, ENST00000593218.1, ENST00000601933.5
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GACTCCGGAGGCCCCCAAGATTGCCTTTCCCTTCCCGGTCGGCAGTaGCGCTCCCGCAAGGAGCTGACGCCCAGGCCCTTAGCACCTGTC | + |
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Preference number: 5 (lower is better) Translates to: DSGGPQDCLSLPGRQ*RSRKELTPRPLAPV Trigger: GACAGGTGCTAAGGGCCTGGGCGTCAGCTCCTTGCGGGAGCGTCACTGCCGACCGGGAAGGGAAAGGCAATCTTGGGGGCCTCCGGAGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000587920.5 ENST00000593218.1 |
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| CDS TCA 90 bp | CTCTCTACATCCCCCTTCCTAGCCCACACACATCACCCATCAGAGTaGTCCTCCGGACTCCGGAGGCCCCCAAGATTGCCTTTCCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LSTSPFLAHTHHPSE*SSGLRRPPRLPFPS Trigger: GGAAGGGAAAGGCAATCTTGGGGGCCTCCGGAGTCCGGAGGATCACTCTGATGGGTGATGTGTGTGGGCTAGGAAGGGGGATGTAGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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| CDS CCA 90 bp | GTGCAGTGTGACTGGGCGTGCAGAGGTCAGTGCATCTGTGATGACTaGTGTAACAGCATCACTGCCTGTGAGCCAGCAAGGCCCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: VQCDWACRGQCICDD*CNSITACEPARPLA Trigger: AGCCAAGGGCCTTGCTGGCTCACAGGCAGTGATGCTGTTACACCAGTCATCACAGATGCACTGACCTCTGCACGCCCAGTCACACTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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| CDS GCA 90 bp | GTAAGGAGACCAGGCGTGCAGTGTGACTGGGCGTGCAGAGGTCAGTaGATCTGTGATGACTGGTGTAACAGCATCACTGCCTGTGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: VRRPGVQCDWACRGQ*ICDDWCNSITACEP Trigger: TGGCTCACAGGCAGTGATGCTGTTACACCAGTCATCACAGATGCACTGACCTCTGCACGCCCAGTCACACTGCACGCCTGGTCTCCTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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| CDS GCA 90 bp | ATCAATTCAAGAGTAAGGAGACCAGGCGTGCAGTGTGACTGGGCGTaGAGAGGTCAGTGCATCTGTGATGACTGGTGTAACAGCATCACT | + |
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Preference number: 5 (lower is better) Translates to: INSRVRRPGVQCDWA*RGQCICDDWCNSIT Trigger: AGTGATGCTGTTACACCAGTCATCACAGATGCACTGACCTCTGCACGCCCAGTCACACTGCACGCCTGGTCTCCTTACTCTTGAATTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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| CDS CCA 90 bp | AAAGAAATCAATTCAAGAGTAAGGAGACCAGGCGTGCAGTGTGACTaGGCGTGCAGAGGTCAGTGCATCTGTGATGACTGGTGTAACAGC | + |
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Preference number: 5 (lower is better) Translates to: KEINSRVRRPGVQCD*ACRGQCICDDWCNS Trigger: GCTGTTACACCAGTCATCACAGATGCACTGACCTCTGCACGCCCAGTCACACTGCACGCCTGGTCTCCTTACTCTTGAATTGATTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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| CDS GCA 72 bp | CCGGCCACACCCAGGCCCAGCGTTGGCCACCACTTATaGGGCGGCTGCGGTCCAGGGACAAGTGAGAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: PATPRPSVGHHL*GGCGPGTSESD Trigger: GTCGCTCTCACTTGTCCCTGGACCGCAGCCGCCGCATAAGTGGTGGCCAACGCTGGGCCTGGGTGTGGCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590613.1 |
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| CDS TCA 72 bp | GGCCCCCAAGATTGCCTTTCCCTTCCCGGTCGGCAGTaGCGCTCCCGCAAGGAGCTGACGCCCAGGCCCTTA | + |
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Preference number: 6 (lower is better) Translates to: GPQDCLSLPGRQ*RSRKELTPRPL Trigger: TAAGGGCCTGGGCGTCAGCTCCTTGCGGGAGCGTCACTGCCGACCGGGAAGGGAAAGGCAATCTTGGGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000587920.5 ENST00000593218.1 |
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| CDS CAA 90 bp | TGTAGTCAGAGCGGCCTCTGCTTCCGGCCACACCCAGGCCCAGCGTaGGCCACCACTTATGCGGCGGCTGCGGTCCAGGGACAAGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: CSQSGLCFRPHPGPA*ATTYAAAAVQGQVR Trigger: TCTCACTTGTCCCTGGACCGCAGCCGCCGCATAAGTGGTGGCCAACGCTGGGCCTGGGTGTGGCCGGAAGCAGAGGCCGCTCTGACTACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590613.1 |
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| CDS TCA 72 bp | TCCCCCTTCCTAGCCCACACACATCACCCATCAGAGTaGTCCTCCGGACTCCGGAGGCCCCCAAGATTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SPFLAHTHHPSE*SSGLRRPPRLP Trigger: AGGCAATCTTGGGGGCCTCCGGAGTCCGGAGGATCACTCTGATGGGTGATGTGTGTGGGCTAGGAAGGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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| CDS CAA 90 bp | GATGACTGGTGTAACAGCATCACTGCCTGTGAGCCAGCAAGGCCCTaGGCTCCCAGGATGAAGCTCTCCAGTTCTGATAAGGCCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: DDWCNSITACEPARP*APRMKLSSSDKAPG Trigger: CCCAGGGGCCTTATCAGAACTGGAGAGCTTCATCCTGGGAGCCAAGGGCCTTGCTGGCTCACAGGCAGTGATGCTGTTACACCAGTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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| CDS GCA 72 bp | CCAGGCGTGCAGTGTGACTGGGCGTGCAGAGGTCAGTaGATCTGTGATGACTGGTGTAACAGCATCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: PGVQCDWACRGQ*ICDDWCNSITA Trigger: GGCAGTGATGCTGTTACACCAGTCATCACAGATGCACTGACCTCTGCACGCCCAGTCACACTGCACGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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| CDS CCA 72 bp | GACTGGGCGTGCAGAGGTCAGTGCATCTGTGATGACTaGTGTAACAGCATCACTGCCTGTGAGCCAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: DWACRGQCICDD*CNSITACEPAR Trigger: CCTTGCTGGCTCACAGGCAGTGATGCTGTTACACCAGTCATCACAGATGCACTGACCTCTGCACGCCCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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| CDS GCA 72 bp | AGAGTAAGGAGACCAGGCGTGCAGTGTGACTGGGCGTaGAGAGGTCAGTGCATCTGTGATGACTGGTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: RVRRPGVQCDWA*RGQCICDDWCN Trigger: GTTACACCAGTCATCACAGATGCACTGACCTCTGCACGCCCAGTCACACTGCACGCCTGGTCTCCTTACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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| CDS CAA 72 bp | TGTAACAGCATCACTGCCTGTGAGCCAGCAAGGCCCTaGGCTCCCAGGATGAAGCTCTCCAGTTCTGATAAG | + |
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Preference number: 6 (lower is better) Translates to: CNSITACEPARP*APRMKLSSSDK Trigger: CTTATCAGAACTGGAGAGCTTCATCCTGGGAGCCAAGGGCCTTGCTGGCTCACAGGCAGTGATGCTGTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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| CDS CAA 72 bp | ATCCACATAGGTGATGCCTCTTGTCCTTTCTGCAGCTaGCGGCTTTCAGTCACCCTTGGATTCAGAGATAGA | + |
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Preference number: 6 (lower is better) Translates to: IHIGDASCPFCS*RLSVTLGFRDR Trigger: TCTATCTCTGAATCCAAGGGTGACTGAAAGCCGCAAGCTGCAGAAAGGACAAGAGGCATCACCTATGTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000587920.5 ENST00000590579.5 ENST00000590613.1 ENST00000601933.5 |
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| CDS CAA 90 bp | GTGATGCCTCTTGTCCTTTCTGCAGCTTGCGGCTTTCAGTCACCCTaGGATTCAGAGATAGAAGTCATCTTAATTCCATCACTGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: VMPLVLSAACGFQSP*DSEIEVILIPSLRP Trigger: TGGCCTCAGTGATGGAATTAAGATGACTTCTATCTCTGAATCCAAGGGTGACTGAAAGCCGCAAGCTGCAGAAAGGACAAGAGGCATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000587920.5 ENST00000590579.5 ENST00000590613.1 ENST00000601933.5 |
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| CDS CAA 72 bp | CTTGTCCTTTCTGCAGCTTGCGGCTTTCAGTCACCCTaGGATTCAGAGATAGAAGTCATCTTAATTCCATCA | + |
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Preference number: 6 (lower is better) Translates to: LVLSAACGFQSP*DSEIEVILIPS Trigger: TGATGGAATTAAGATGACTTCTATCTCTGAATCCAAGGGTGACTGAAAGCCGCAAGCTGCAGAAAGGACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000587920.5 ENST00000590579.5 ENST00000590613.1 ENST00000593218.1 ENST00000601933.5 |
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| CDS TCA 72 bp | TGTTCAAGAATAAATCCATCAGCTAACTTCAGACCGTaGTTCACACAGGAAGGGAACTTTAAGAGGTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: CSRINPSANFRP*FTQEGNFKRSP Trigger: TGGCGACCTCTTAAAGTTCCCTTCCTGTGTGAATCACGGTCTGAAGTTAGCTGATGGATTTATTCTTGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593218.1 |
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