RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZCWPW1 (Homo sapiens)

Ensembl gene IDs: ENSG00000078487

Ensembl transcript IDs: ENST00000360951.8, ENST00000398027.6, ENST00000464510.5, ENST00000471336.1, ENST00000472716.1, ENST00000479315.1, ENST00000490089.1, ENST00000490721.5, ENST00000684423.1

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGCAGCTCCCCGCTCTGCCCCAGCTCTCTCCCAACATCTTCCATaGGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGG +
Preference number: 1 (lower is better)
Translates to: AAAPRSAPALSQHLP*VAPGPGHWRLRPQG
Trigger: CCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGAGAGAGCTGGGGCAGAGCGGGGAGCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360951.8
3UTR-3UTR GCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGACATCTTCCATGAGTTaGTCCAGGTCCAGGTCACTG +
Preference number: 2 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKTSSMS*SRSRSL
Trigger: CAGTGACCTGGACCTGGAGCAACTCATGGAAGATGT...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360951.8
3UTR-3UTR GCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGACAGTCGACTGTAACCTaGTTTATTAACACAGAAACT +
Preference number: 2 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGQSTVT*FINTET
Trigger: AGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTG...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
3UTR GCA 72 bp CTCTGCCCCAGCTCTCTCCCAACATCTTCCATGAGTTaGTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCA +
Preference number: 3 (lower is better)
Translates to: LCPSSLPTSSMS*SRSRSLEASSS
Trigger: TGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGAGAGAGCTGGGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp TCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGCCCCACTGTCACCCCTaGCGCCCTGTCCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSMSCSRSRSLEASSSRGPHCHP*RPVLGP
Trigger: TGGGCCGAGGACAGGGCGGCAGGGGTGACAGTGGGG...CCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp TCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCCCATCACTGTTGCTGTaGTGCAGCTCCCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SRSRSLEASSSRGTLPASPSLLL*CSSPLC
Trigger: GCAGAGCGGGGAGCTGCAGCACAGCAACAGTGATGG...GGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CCA 90 bp TCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCACACTTCCAGCCTCCTaGGTCAGGGGTTCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: SRSRSLEASSSRGTLPASTLPAS*VRGSRC
Trigger: ACACCGGGAACCCCTGACCCAGGAGGCTGGAAGTGT...GGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR TCA 90 bp CAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCTGCTCTTCTTTCGCAGATaGGGGGCAGGCCCCCTTACA +
Preference number: 4 (lower is better)
Translates to: QVQVTGGFVLKGDTSSLLLFFRR*GAGPLT
Trigger: TGTAAGGGGGCCTGCCCCTCATCTGCGAAAGAAGAG...CAGGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR GCA 90 bp CATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCACTGTTGCTGTGCTaGAGCTCCCCGCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HELLQVQVTGGFVLKGDTSLLLC*SSPLCP
Trigger: GGGGCAGAGCGGGGAGCTGCAGCACAGCAACAGTGA...AGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp TCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGCCTCGCCATCACTGTTaGTGTGCTGCAGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: SSMSCSRSRSLEASSSRGPRHHC*CAAAPR
Trigger: GCGGGGAGCTGCAGCACAGCAACAGTGATGGCGAGG...CCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CCA 90 bp GAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCACACTTCCAGCCTCCTaGGTCAGGGGTTCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: ELLQVQVTGGFVLKGDTSTLPAS*VRGSRC
Trigger: ACACCGGGAACCCCTGACCCAGGAGGCTGGAAGTGT...GGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp TTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCCAGGTCCAGGTCACTaGAGGCTTCGTCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LLQVQVTGGFVLKGDTSSPGPGH*RLRPQG
Trigger: CCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGG...GCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp GGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCTGGGTTCCCTCTGAAAAGCTaGCTGCCAAGGCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GPGHWRLRPQGGHFQPPGFPLKS*LPRPCS
Trigger: AGAGCAAGGCCTTGGCAGCCAGCTTTTCAGAGGGAA...CCCAGGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp TTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCGGGGTTCCCGGTGTCTaGGCTCTTCTTTCGCAGATG +
Preference number: 4 (lower is better)
Translates to: LLQVQVTGGFVLKGDTSSGVPGV*ALLSQM
Trigger: CATCTGCGAAAGAAGAGCCCAGACACCGGGAACCCC...GCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp TCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGCCAGGTCCAGGTCACTaGAGGCTTCGTCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SSMSCSRSRSLEASSSRGPGPGH*RLRPQG
Trigger: CCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGG...CCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR GCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGATCACTGTTGCTGTGCTaGAGCTCCCCGCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGSLLLC*SSPLCP
Trigger: GGGGCAGAGCGGGGAGCTGCAGCACAGCAACAGTGA...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGACCTCGCCATCACTGTTaGTGTGCTGCAGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGPRHHC*CAAAPR
Trigger: GCGGGGAGCTGCAGCACAGCAACAGTGATGGCGAGG...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGACTCGGCCATCTGCTGTaGCTGCATCACCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGLGHLL*LHHPQA
Trigger: GGCTTGGGGGTGATGCAGGCACAGCAGATGGCCGAG...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR CCA 90 bp TGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCCCAGATGATGGATCCTaGGATGTAGGAGGCATAGGC +
Preference number: 4 (lower is better)
Translates to: CSRSRSLEASSSRGTLPAPDDGS*DVGGIG
Trigger: GCCTATGCCTCCTACATCCCAGGATCCATCATCTGG...GGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp CAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCTGTTCCCTCTGAAAAGCTaGCTGCCAAGGCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QVQVTGGFVLKGDTSSLLFPLKS*LPRPCS
Trigger: AGAGCAAGGCCTTGGCAGCCAGCTTTTCAGAGGGAA...CAGGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGACACTTCCAGCCTCCTaGGTCAGGGGTTCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKTLPAS*VRGSRC
Trigger: ACACCGGGAACCCCTGACCCAGGAGGCTGGAAGTGT...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp GAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCATTGCTTGGCCCAGATaGTGGATCCTGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: ELLQVQVTGGFVLKGDTSIAWPR*WILGCR
Trigger: CCTACATCCCAGGATCCATCATCTGGGCCAAGCAAT...GGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR TCA 90 bp GTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCCGTTCCTGAATGCTaGTCTGTTCTGCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: VAPGPGHWRLRPQGGHFQPVPEC*SVLPLE
Trigger: CTCAAGAGGCAGAACAGATCAGCATTCAGGAACGGG...CTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCACCCCACTGTCACCCCTaGCGCCCTGTCCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPPHCHP*RPVLGP
Trigger: TGGGCCGAGGACAGGGCGGCAGGGGTGACAGTGGGG...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR GCA 90 bp GCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTACATCTTCCATGAGTTaGTCCAGGTCCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: APGPGHWRLRPQGGHFQPTSSMS*SRSRSL
Trigger: CAGTGACCTGGACCTGGAGCAACTCATGGAAGATGT...AGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR GCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGACCATCACTGTTGCTGTaGTGCAGCTCCCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGPSLLL*CSSPLC
Trigger: GCAGAGCGGGGAGCTGCAGCACAGCAACAGTGATGG...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp TGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCGGTGCAGGATCTGGCTaGCCTAACTTAGATGTCCTT +
Preference number: 4 (lower is better)
Translates to: CSRSRSLEASSSRGTLPAGAGSG*PNLDVL
Trigger: AAGGACATCTAAGTTAGGCCAGCCAGATCCTGCACC...GGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CCA 90 bp AGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCTGGCCATTTCCCACAGTTTaGGAAGGAACACTGGACCCA +
Preference number: 4 (lower is better)
Translates to: RSRSLEASSSRGTLPASWPFPTV*EGTLDP
Trigger: TGGGTCCAGTGTTCCTTCCCAAACTGTGGGAAATGG...CCAGGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp GAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCCCAGATGATGGATCCTaGGATGTAGGAGGCATAGGC +
Preference number: 4 (lower is better)
Translates to: ELLQVQVTGGFVLKGDTSPDDGS*DVGGIG
Trigger: GCCTATGCCTCCTACATCCCAGGATCCATCATCTGG...GGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp TGCCCCAGCTCTCTCCCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGCCACCCCCAGTTTCTaGCTGCAGTCATTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: CPSSLPTSSMSCSRSRSLATPSF*LQSFLR
Trigger: GCGCAGAAATGACTGCAGCCAGAAACTGGGGGTGGC...CAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGAGAGAGCTGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGGGTTCCCGGTGTCTaGGCTCTTCTTTCGCAGATG +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKGVPGV*ALLSQM
Trigger: CATCTGCGAAAGAAGAGCCCAGACACCGGGAACCCC...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGACCAGGTCCAGGTCACTaGAGGCTTCGTCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGPGPGH*RLRPQG
Trigger: CCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGG...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp AGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAATCCCCAAGCACTCCTaGAGGGACTTCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: SCSRSRSLEASSSRGTLPIPKHS*RDFCRT
Trigger: TGTTCTGCAGAAGTCCCTTCAGGAGTGCTTGGGGAT...TGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR TCA 90 bp CAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCTGAGTTCTTTAGCATGTTaGCTGGGATCCATGCACGAG +
Preference number: 4 (lower is better)
Translates to: QVQVTGGFVLKGDTSSLLSSLAC*LGSMHE
Trigger: CTCGTGCATGGATCCCAGTCAACATGCTAAAGAACT...CAGGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR TCA 90 bp GCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTTTCTGCGCTTTTTCATaGCTGATAGCTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: APGPGHWRLRPQGGHFQPFCAFS*LIAPGT
Trigger: TGTCCCTGGAGCTATCAGTCATGAAAAAGCGCAGAA...AGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR TCA 90 bp CCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCACTCTTCTTTCGCAGATaGGGGGCAGGCCCCCTTACA +
Preference number: 4 (lower is better)
Translates to: PTSSMSCSRSRSLEASSSLFFRR*GAGPLT
Trigger: TGTAAGGGGGCCTGCCCCTCATCTGCGAAAGAAGAG...TGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR TCA 90 bp GTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGGAACCTCATAGCCAATaGACAGACCCAGCACTTAGC +
Preference number: 4 (lower is better)
Translates to: VAPGPGHWRLRPQGGHFQEPHSQ*TDPALS
Trigger: GCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTC...CTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCTGGCACAAGAAGTCTCTaGAAAATCAAGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: PGPGHWRLRPQGGHFQPPGTRSL*KIKARS
Trigger: GGATCTGGCCTTGATTTTGCAGAGACTTCTTGTGCC...AGGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp AAGAGGGAGCAGAGGAGCACCAGCTACTTCCCAAACAGCGCCACGGGGAAGTCCGATCAGATTCTATCATaGCTGGCCACCAGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: KREQRSTSYFPNSATGKSDQILS*LATRGN
Trigger: GTTACCCCTGGTGGCCAGGCATGATAGAATCTGATC...GGACTTCCCCGTGGCGCTGTTTGGGAAGTAGCTGGTGCTCCTCTGCTCCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp GTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGGATCAGATTCTATCATaGCTGGCCACCAGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: VAPGPGHWRLRPQGGHFQDQILS*LATRGN
Trigger: GTTACCCCTGGTGGCCAGGCATGATAGAATCTGATC...CTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR GCA 90 bp AAGAGGGAGCAGAGGAGCACCAGCTACTTCCCAAACAGCGCCACGGGGAAGTCCACATCTTCCATGAGTTaGTCCAGGTCCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: KREQRSTSYFPNSATGKSTSSMS*SRSRSL
Trigger: CAGTGACCTGGACCTGGAGCAACTCATGGAAGATGT...GGACTTCCCCGTGGCGCTGTTTGGGAAGTAGCTGGTGCTCCTCTGCTCCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGTTGGCAGGCTTATCCTaGCCTCTGTCTCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKLAGLS*PLSLGN
Trigger: GTTCCCCAGAGACAGAGGCCAGGATAAGCCTGCCAA...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp GAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGATTCTATCATGCCTaGCCACCAGGGGTAACCGTA +
Preference number: 4 (lower is better)
Translates to: ELLQVQVTGGFVLKGDTSRFYHA*PPGVTV
Trigger: TACGGTTACCCCTGGTGGCCAGGCATGATAGAATCT...GGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGAGCCACCCCCAGTTTCTaGCTGCAGTCATTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGATPSF*LQSFLR
Trigger: GCGCAGAAATGACTGCAGCCAGAAACTGGGGGTGGC...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAGGGGTTCCCGGTGTCTaGGCTCTTCTTTCGCAGATG +
Preference number: 4 (lower is better)
Translates to: PTSSMSCSRSRSLEASSSGVPGV*ALLSQM
Trigger: CATCTGCGAAAGAAGAGCCCAGACACCGGGAACCCC...TGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR TCA 90 bp CCCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCATTGCTTGGCCCAGATaGTGGATCCTGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: PNIFHELLQVQVTGGFVLIAWPR*WILGCR
Trigger: CCTACATCCCAGGATCCATCATCTGGGCCAAGCAAT...GAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR TCA 90 bp CTCTCTCCCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCATCTGTTCTGCCTCTTaGGCCATCATCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LSPNIFHELLQVQVTGGFICSAS*AIIRAT
Trigger: GGTGGCCCTGATGATGGCTCAAGAGGCAGAACAGAT...GAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR TCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGCCCGTTCCTGAATGCTaGTCTGTTCTGCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKPVPEC*SVLPLE
Trigger: CTCAAGAGGCAGAACAGATCAGCATTCAGGAACGGG...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp TCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCAATGCTGATCTGTTCTaGCTCTTGAGCCATCATCAG +
Preference number: 4 (lower is better)
Translates to: SRSRSLEASSSRGTLPASNADLF*LLSHHQ
Trigger: CTGATGATGGCTCAAGAGGCAGAACAGATCAGCATT...GGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCACCTGCCTCGGCCATCTaGTGTGCCTGCATCACCCCC +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPPASAI*CACITP
Trigger: GGGGGTGATGCAGGCACAGCAGATGGCCGAGGCAGG...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR CCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGCTCCTTGTCTGATTaGGTAGATACTACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKGSLSD*VDTTGW
Trigger: CCAGCCCGTAGTATCTACCCAATCAGACAAGGAGCC...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGCCAGATGATGGATCCTaGGATGTAGGAGGCATAGGC +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKPDDGS*DVGGIG
Trigger: GCCTATGCCTCCTACATCCCAGGATCCATCATCTGG...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp TTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCTCCAGGGACAGCTCCTaGAAGTTCTTTAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: LLQVQVTGGFVLKGDTSSSRDSS*KFFSML
Trigger: CAACATGCTAAAGAACTTCCAGGAGCTGTCCCTGGA...GCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGACTTTCCTTCCCATTCTaGGTGCAGGAGGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGLSFPF*VQEELW
Trigger: CCACAGCTCCTCCTGCACCCAGAATGGGAAGGAAAG...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR TCA 90 bp TGCCCCAGCTCTCTCCCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAAAGCTTAGGATTTTaGGACTCTCCTGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: CPSSLPTSSMSCSRSRSLESLGF*DSPGPH
Trigger: GTGGGGTCCAGGAGAGTCTCAAAATCCTAAGCTTTC...CAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGAGAGAGCTGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR TCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGATCCTGGCTCCTTGTCTaGTTGGGTAGATACTACGGG +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGSWLLV*LGRYYG
Trigger: CCCGTAGTATCTACCCAATCAGACAAGGAGCCAGGA...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp GAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCGACACTGAAATCTCTTaGGTATGTGGTACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ELLQVQVTGGFVLKGDTSDTEIS*VCGTSS
Trigger: AGAGGAGGTACCACATACTCAAGAGATTTCAGTGTC...GGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR TCA 90 bp TCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACAATTATCTGGGAGAACTaGGGGGTCAATGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: SMSCSRSRSLEASSSRGTIIWEN*GVNVPT
Trigger: TGTGGGAACATTGACCCCTCAGTTCTCCCAGATAAT...TGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR TCA 90 bp TCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGATTATCTGGGAGAACTaGGGGGTCAATGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: SSMSCSRSRSLEASSSRGIIWEN*GVNVPT
Trigger: TGTGGGAACATTGACCCCTCAGTTCTCCCAGATAAT...CCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR TCA 90 bp CTCTCTCCCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCTCCCAACATCTTCCATaGGTTGCTCCAGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSPNIFHELLQVQVTGGFSQHLP*VAPGPG
Trigger: ACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGA...GAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR TCA 90 bp CCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCATCCCAACATCTTCCATaGGTTGCTCCAGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PTSSMSCSRSRSLEASSSSQHLP*VAPGPG
Trigger: ACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGA...TGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR GCA 90 bp TCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACATCTGATAACTCAGGTTaGCCCTCCTCTGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SMSCSRSRSLEASSSRGTSDNSG*PSSVSG
Trigger: ACCTGAAACAGAGGAGGGGCAACCTGAGTTATCAGA...TGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp TTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACGTTGACTGGGATCCATaGACGAGAAACTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FHELLQVQVTGGFVLKGDVDWDP*TRNCFS
Trigger: GGAGAAACAGTTTCTCGTGCATGGATCCCAGTCAAC...GTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR GCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCATCACTGTTGCTGTGCTaGAGCTCCCCGCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLASLLLC*SSPLCP
Trigger: GGGGCAGAGCGGGGAGCTGCAGCACAGCAACAGTGA...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGACCTTCCCATTCTGGGTaGAGGAGGAGCTGTGGATTT +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGPSHSG*RRSCGF
Trigger: AAATCCACAGCTCCTCCTGCACCCAGAATGGGAAGG...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR CCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGTAGATACTACGGGCTaGGCACAAGAAGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKVDTTG*AQEVSA
Trigger: TGCAGAGACTTCTTGTGCCCAGCCCGTAGTATCTAC...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGGGACAGCTCCTaGAAGTTCTTTAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: HELLQVQVTGGFVLKGDTSRDSS*KFFSML
Trigger: CAACATGCTAAAGAACTTCCAGGAGCTGTCCCTGGA...AGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGATTCCCTCTGAAAAGCTaGCTGCCAAGGCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGFPLKS*LPRPCS
Trigger: AGAGCAAGGCCTTGGCAGCCAGCTTTTCAGAGGGAA...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp TCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACAACCTTCCCAAGACACTaGAATCTCTTGAGTATGTGG +
Preference number: 4 (lower is better)
Translates to: SMSCSRSRSLEASSSRGTTFPRH*NLLSMW
Trigger: CCACATACTCAAGAGATTTCAGTGTCTTGGGAAGGT...TGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR TCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGAGTTCTTTAGCATGTTaGCTGGGATCCATGCACGAG +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKSSLAC*LGSMHE
Trigger: CTCGTGCATGGATCCCAGTCAACATGCTAAAGAACT...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGAATACCCAAGCACTCCTaGAGGGACTTCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGIPKHS*RDFCRT
Trigger: TGTTCTGCAGAAGTCCCTTCAGGAGTGCTTGGGTAT...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490721.5
CDS-3UTR GCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGAGATCAGATTCTATCATaGCTGGCCACCAGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGDQILS*LATRGN
Trigger: GTTACCCCTGGTGGCCAGGCATGATAGAATCTGATC...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCACCATCACTGTTGCTGTaGTGCAGCTCCCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAPSLLL*CSSPLC
Trigger: GCAGAGCGGGGAGCTGCAGCACAGCAACAGTGATGG...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGAAGATTCTATCATGCCTaGCCACCAGGGGTAACCGTA +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGRFYHA*PPGVTV
Trigger: TACGGTTACCCCTGGTGGCCAGGCATGATAGAATCT...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAACACTTCCAGCCTCCTaGGTCAGGGGTTCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLATLPAS*VRGSRC
Trigger: ACACCGGGAACCCCTGACCCAGGAGGCTGGAAGTGT...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCACCAGGTCCAGGTCACTaGAGGCTTCGTCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPPGPGH*RLRPQG
Trigger: CCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGG...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGCTTTTTGCTGGTCCCTaGTCTGAGAATGATCCTGAA +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKLFAGP*SENDPE
Trigger: TTCAGGATCATTCTCAGATCAGGGACCAGCAAAAAG...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp TTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACTGCACATCTGTGTTCTaGTCACAGGACCAATTATCT +
Preference number: 4 (lower is better)
Translates to: FHELLQVQVTGGFVLKGDCTSVF*SQDQLS
Trigger: AGATAATTGGTCCTGTGATCAGAACACAGATGTGCA...GTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR TCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCACTCTTCTTTCGCAGATaGGGGGCAGGCCCCCTTACA +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLALFFRR*GAGPLT
Trigger: TGTAAGGGGGCCTGCCCCTCATCTGCGAAAGAAGAG...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACCTCTTCTTTCGCAGATaGGGGGCAGGCCCCCTTACA +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHLFFRR*GAGPLT
Trigger: TGTAAGGGGGCCTGCCCCTCATCTGCGAAAGAAGAG...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGATGGCTGGTCAGAATCTaGATTCCCTTGGCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGWLVRI*IPLAFF
Trigger: AAAGAAGGCCAAGGGAATTCAGATTCTGACCAGCCA...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR GCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGATCTGATAACTCAGGTTaGCCCTCCTCTGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGSDNSG*PSSVSG
Trigger: ACCTGAAACAGAGGAGGGGCAACCTGAGTTATCAGA...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000398027.6
CDS-3UTR GCA 90 bp AGCTCTCTCCCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTGTTGACTGGGATCCATaGACGAGAAACTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSLPTSSMSCSRSRSLEAVDWDP*TRNCFS
Trigger: GGAGAAACAGTTTCTCGTGCATGGATCCCAGTCAAC...AGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGAGAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGAATGCTGATCTGTTCTaGCTCTTGAGCCATCATCAG +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKNADLF*LLSHHQ
Trigger: CTGATGATGGCTCAAGAGGCAGAACAGATCAGCATT...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCAGCCATCTGCTGTGCCTaGATCACCCCCAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RDQPTQSTVTCFINTETAAICCA*ITPKPS
Trigger: AGAGGGCTTGGGGGTGATGCAGGCACAGCAGATGGC...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR GCA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCATCCTCTGCAGTGTCCTaGCTCGGCCATCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RDQPTQSTVTCFINTETASSAVS*LGHLLC
Trigger: GCACAGCAGATGGCCGAGGCAGGACACTGCAGAGGA...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR CCA 90 bp TCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGGGCAAAGATTCTCTTTaGTCCCTTTCCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: SSMSCSRSRSLEASSSRGGKDSL*SLSTFF
Trigger: GAAGAATGTGGAAAGGGACCAAAGAGAATCTTTGCC...CCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGA
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CCA 90 bp CTCTCTCCCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCCTCCTGTTCCCTGCTTaGAACATTCTTCATGGTTGC +
Preference number: 4 (lower is better)
Translates to: LSPNIFHELLQVQVTGGFLLFPA*NILHGC
Trigger: GCAACCATGAAGAATGTTCCAAGCAGGGAACAGGAG...GAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CCA 90 bp AACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGTAGATACTACGGGCTaGGCACAAGAAGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NIFHELLQVQVTGGFVLKVDTTG*AQEVSA
Trigger: TGCAGAGACTTCTTGTGCCCAGCCCGTAGTATCTAC...CTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CCA 90 bp AACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGCCATTTCCCACAGTTTaGGAAGGAACACTGGACCCA +
Preference number: 4 (lower is better)
Translates to: NIFHELLQVQVTGGFVLKPFPTV*EGTLDP
Trigger: TGGGTCCAGTGTTCCTTCCCAAACTGTGGGAAATGG...CTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGATCCAGGGACAGCTCCTaGAAGTTCTTTAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGSRDSS*KFFSML
Trigger: CAACATGCTAAAGAACTTCCAGGAGCTGTCCCTGGA...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAGCCACCCCCAGTTTCTaGCTGCAGTCATTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAATPSF*LQSFLR
Trigger: GCGCAGAAATGACTGCAGCCAGAAACTGGGGGTGGC...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAGGGGTTCCCGGTGTCTaGGCTCTTCTTTCGCAGATG +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPGVPGV*ALLSQM
Trigger: CATCTGCGAAAGAAGAGCCCAGACACCGGGAACCCC...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGAACCTTCCCAAGACACTaGAATCTCTTGAGTATGTGG +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGTFPRH*NLLSMW
Trigger: CCACATACTCAAGAGATTTCAGTGTCTTGGGAAGGT...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp CTCTCTCCCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCCTTTTTGCTGGTCCCTaGTCTGAGAATGATCCTGAA +
Preference number: 4 (lower is better)
Translates to: LSPNIFHELLQVQVTGGFLFAGP*SENDPE
Trigger: TTCAGGATCATTCTCAGATCAGGGACCAGCAAAAAG...GAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR TCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACATCTGTTCTGCCTCTTaGGCCATCATCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHICSAS*AIIRAT
Trigger: GGTGGCCCTGATGATGGCTCAAGAGGCAGAACAGAT...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp CAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCTGCATTCTTCTTTATTCTaGAACGTTGTCATCATTCAG +
Preference number: 4 (lower is better)
Translates to: QVQVTGGFVLKGDTSSLLHSSLF*NVVIIQ
Trigger: CTGAATGATGACAACGTTGCAGAATAAAGAAGAATG...CAGGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGTTTTCTCCTGTTCCCTaGTTGGAACATTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKFSPVP*LEHSSW
Trigger: CCATGAAGAATGTTCCAAGCAGGGAACAGGAGAAAA...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCATTGGCAGGCTTATCCTaGCCTCTGTCTCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLALAGLS*PLSLGN
Trigger: GTTCCCCAGAGACAGAGGCCAGGATAAGCCTGCCAA...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTGGCAGGCTTATCCTaGCCTCTGTCTCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHLAGLS*PLSLGN
Trigger: GTTCCCCAGAGACAGAGGCCAGGATAAGCCTGCCAA...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCATCCTGGCTCCTTGTCTaGTTGGGTAGATACTACGGG +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLASWLLV*LGRYYG
Trigger: CCCGTAGTATCTACCCAATCAGACAAGGAGCCAGGA...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAATTGCTTGGCCCAGATaGTGGATCCTGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPIAWPR*WILGCR
Trigger: CCTACATCCCAGGATCCATCATCTGGGCCAAGCAAT...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACATTGCTTGGCCCAGATaGTGGATCCTGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHIAWPR*WILGCR
Trigger: CCTACATCCCAGGATCCATCATCTGGGCCAAGCAAT...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCAATCTGTTCTGCCTCTTaGGCCATCATCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: RDQPTQSTVTCFINTETAICSAS*AIIRAT
Trigger: GGTGGCCCTGATGATGGCTCAAGAGGCAGAACAGAT...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR TCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCATCCCAACATCTTCCATaGGTTGCTCCAGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPSQHLP*VAPGPG
Trigger: ACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGA...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGCAGTCACTGCTTAACTaGAACCCTTTTTCTCTTACT +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKQSLLN*NPFSLT
Trigger: AGTAAGAGAAAAAGGGTTTCAGTTAAGCAGTGACTG...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490721.5
CDS-3UTR GCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGATTTTCTCCTGTTCCCTaGTTGGAACATTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGFSPVP*LEHSSW
Trigger: CCATGAAGAATGTTCCAAGCAGGGAACAGGAGAAAA...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACGGCTCCTTGTCTGATTaGGTAGATACTACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHGSLSD*VDTTGW
Trigger: CCAGCCCGTAGTATCTACCCAATCAGACAAGGAGCC...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTCCCTCTGAAAAGCTaGCTGCCAAGGCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHFPLKS*LPRPCS
Trigger: AGAGCAAGGCCTTGGCAGCCAGCTTTTCAGAGGGAA...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAGTGCAGGAGGAGCTGTaGATTTCCTGCCTAGAGATC +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAVQEEL*ISCLEI
Trigger: GATCTCTAGGCAGGAAATCCACAGCTCCTCCTGCAC...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR TCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACGAAAGCTTAGGATTTTaGGACTCTCCTGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHESLGF*DSPGPH
Trigger: GTGGGGTCCAGGAGAGTCTCAAAATCCTAAGCTTTC...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000398027.6
CDS-3UTR TCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGCTCCTCTGTTTCAGGTaGATTAACTTCTTTCACAAT +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKLLCFR*INFFHN
Trigger: ATTGTGAAAGAAGTTAATTCACCTGAAACAGAGGAG...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000398027.6
CDS-3UTR TCA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCCGTTCCTGAATGCTaGTCTGTTCTGCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: RDQPTQSTVTCFINTETAPVPEC*SVLPLE
Trigger: CTCAAGAGGCAGAACAGATCAGCATTCAGGAACGGG...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR TCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACGAACCTCATAGCCAATaGACAGACCCAGCACTTAGC +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHEPHSQ*TDPALS
Trigger: GCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTC...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAGAACCTCATAGCCAATaGACAGACCCAGCACTTAGC +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAEPHSQ*TDPALS
Trigger: GCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTC...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp ATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGTCTTTCTTCTCTGCTTaGTTGTTGATTTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: IFHELLQVQVTGGFVLKGSFFSA*LLICAF
Trigger: AAAGGCACAAATCAACAAGCAAGCAGAGAAGAAAGA...CCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR GCA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGTCTTTCTTCTCTGCTTaGTTGTTGATTTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKSFFSA*LLICAF
Trigger: AAAGGCACAAATCAACAAGCAAGCAGAGAAGAAAGA...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACGATCAGATTCTATCATaGCTGGCCACCAGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHDQILS*LATRGN
Trigger: GTTACCCCTGGTGGCCAGGCATGATAGAATCTGATC...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAACATCTTCCATGAGTTaGTCCAGGTCCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLATSSMS*SRSRSL
Trigger: CAGTGACCTGGACCTGGAGCAACTCATGGAAGATGT...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAACATCTTCCATGAGTTaGTCCAGGTCCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPTSSMS*SRSRSL
Trigger: CAGTGACCTGGACCTGGAGCAACTCATGGAAGATGT...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCATTCATTATCTTCCTCTaGAGTGTCCTGCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPFIIFL*SVLPRP
Trigger: TGGCCGAGGCAGGACACTGCAGAGGAAGATAATGAA...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR CCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAGTAGATACTACGGGCTaGGCACAAGAAGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAVDTTG*AQEVSA
Trigger: TGCAGAGACTTCTTGTGCCCAGCCCGTAGTATCTAC...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCAGGCTCCTTGTCTGATTaGGTAGATACTACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RDQPTQSTVTCFINTETAGSLSD*VDTTGW
Trigger: CCAGCCCGTAGTATCTACCCAATCAGACAAGGAGCC...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR CCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAGGTGCAGGATCTGGCTaGCCTAACTTAGATGTCCTT +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPGAGSG*PNLDVL
Trigger: AAGGACATCTAAGTTAGGCCAGCCAGATCCTGCACC...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAGGTGCAGGATCTGGCTaGCCTAACTTAGATGTCCTT +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAGAGSG*PNLDVL
Trigger: AAGGACATCTAAGTTAGGCCAGCCAGATCCTGCACC...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCACCATTTCCCACAGTTTaGGAAGGAACACTGGACCCA +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAPFPTV*EGTLDP
Trigger: TGGGTCCAGTGTTCCTTCCCAAACTGTGGGAAATGG...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACCCATTTCCCACAGTTTaGGAAGGAACACTGGACCCA +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHPFPTV*EGTLDP
Trigger: TGGGTCCAGTGTTCCTTCCCAAACTGTGGGAAATGG...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAGATGATGGATCCTaGGATGTAGGAGGCATAGGC +
Preference number: 4 (lower is better)
Translates to: RDQPTQSTVTCFINTETAPDDGS*DVGGIG
Trigger: GCCTATGCCTCCTACATCCCAGGATCCATCATCTGG...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR CCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAAGATTCTATCATGCCTaGCCACCAGGGGTAACCGTA +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLARFYHA*PPGVTV
Trigger: TACGGTTACCCCTGGTGGCCAGGCATGATAGAATCT...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAATTATCTGGGAGAACTaGGGGGTCAATGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPIIWEN*GVNVPT
Trigger: TGTGGGAACATTGACCCCTCAGTTCTCCCAGATAAT...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACATTATCTGGGAGAACTaGGGGGTCAATGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHIIWEN*GVNVPT
Trigger: TGTGGGAACATTGACCCCTCAGTTCTCCCAGATAAT...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACAGTTCTTTAGCATGTTaGCTGGGATCCATGCACGAG +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHSSLAC*LGSMHE
Trigger: CTCGTGCATGGATCCCAGTCAACATGCTAAAGAACT...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCATTCTGCGCTTTTTCATaGCTGATAGCTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPFCAFS*LIAPGT
Trigger: TGTCCCTGGAGCTATCAGTCATGAAAAAGCGCAGAA...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGATCTTTCTTCTCTGCTTaGTTGTTGATTTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGSFFSA*LLICAF
Trigger: AAAGGCACAAATCAACAAGCAAGCAGAGAAGAAAGA...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAGGCACAAGAAGTCTCTaGAAAATCAAGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAGTRSL*KIKARS
Trigger: GGATCTGGCCTTGATTTTGCAGAGACTTCTTGTGCC...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAGGCACAAGAAGTCTCTaGAAAATCAAGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPGTRSL*KIKARS
Trigger: GGATCTGGCCTTGATTTTGCAGAGACTTCTTGTGCC...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAGTTGACTGGGATCCATaGACGAGAAACTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAVDWDP*TRNCFS
Trigger: GGAGAAACAGTTTCTCGTGCATGGATCCCAGTCAAC...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACCTCCTGTTCCCTGCTTaGAACATTCTTCATGGTTGC +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHLLFPA*NILHGC
Trigger: GCAACCATGAAGAATGTTCCAAGCAGGGAACAGGAG...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTCCAGGGACAGCTCCTaGAAGTTCTTTAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHSRDSS*KFFSML
Trigger: CAACATGCTAAAGAACTTCCAGGAGCTGTCCCTGGA...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCATTCTTAGGGCCTGGCTaGTCAGAATCTGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPFLGPG*SESEFP
Trigger: AGGGAATTCAGATTCTGACCAGCCAGGCCCTAAGAA...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR TCA 90 bp AACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGCTCCTCTGTTTCAGGTaGATTAACTTCTTTCACAAT +
Preference number: 4 (lower is better)
Translates to: NIFHELLQVQVTGGFVLKLLCFR*INFFHN
Trigger: ATTGTGAAAGAAGTTAATTCACCTGAAACAGAGGAG...CTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR TCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAGACACTGAAATCTCTTaGGTATGTGGTACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPDTEIS*VCGTSS
Trigger: AGAGGAGGTACCACATACTCAAGAGATTTCAGTGTC...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACGACACTGAAATCTCTTaGGTATGTGGTACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHDTEIS*VCGTSS
Trigger: AGAGGAGGTACCACATACTCAAGAGATTTCAGTGTC...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCACTTTTTGCTGGTCCCTaGTCTGAGAATGATCCTGAA +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLALFAGP*SENDPE
Trigger: TTCAGGATCATTCTCAGATCAGGGACCAGCAAAAAG...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCAAGTTCTTTAGCATGTTaGCTGGGATCCATGCACGAG +
Preference number: 4 (lower is better)
Translates to: RDQPTQSTVTCFINTETASSLAC*LGSMHE
Trigger: CTCGTGCATGGATCCCAGTCAACATGCTAAAGAACT...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR TCA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCATTCTGCGCTTTTTCATaGCTGATAGCTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: RDQPTQSTVTCFINTETAFCAFS*LIAPGT
Trigger: TGTCCCTGGAGCTATCAGTCATGAAAAAGCGCAGAA...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR TCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCATTTGGGTCTGTATTTTaGCTCGCTTACGAATGGGCA +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPFGSVF*LAYEWA
Trigger: TGCCCATTCGTAAGCGAGTCAAAATACAGACCCAAA...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAAATGCTGATCTGTTCTaGCTCTTGAGCCATCATCAG +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPNADLF*LLSHHQ
Trigger: CTGATGATGGCTCAAGAGGCAGAACAGATCAGCATT...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACTCCTGTTCCCTGCTTaGAACATTCTTCATGGTTGC +
Preference number: 4 (lower is better)
Translates to: RDQPTQSTVTCFINTETALLFPA*NILHGC
Trigger: GCAACCATGAAGAATGTTCCAAGCAGGGAACAGGAG...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR TCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTGCACATCTGTGTTCTaGTCACAGGACCAATTATCT +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHCTSVF*SQDQLS
Trigger: AGATAATTGGTCCTGTGATCAGAACACAGATGTGCA...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR TCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCATGCACATCTGTGTTCTaGTCACAGGACCAATTATCT +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPCTSVF*SQDQLS
Trigger: AGATAATTGGTCCTGTGATCAGAACACAGATGTGCA...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTTTCTCCTGTTCCCTaGTTGGAACATTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHFSPVP*LEHSSW
Trigger: CCATGAAGAATGTTCCAAGCAGGGAACAGGAGAAAA...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAGAGCTGTGGATTTCCTaGCTAGAGATCTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPELWIS*LEISSL
Trigger: TAATGAAGAGATCTCTAGGCAGGAAATCCACAGCTC...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR GCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCATTTTCTCTTACTACATaGCATACCCAAGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAFSLTT*HTQALL
Trigger: CAGGAGTGCTTGGGTATGGCATGTAGTAAGAGAAAA...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490721.5
CDS-3UTR CCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAGGCAAAGATTCTCTTTaGTCCCTTTCCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAGKDSL*SLSTFF
Trigger: GAAGAATGTGGAAAGGGACCAAAGAGAATCTTTGCC...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000398027.6
CDS-3UTR CCA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACCTTTCTTCTTTAAACTaGCCTTTGGCAGGCTTATCC +
Preference number: 4 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHLSSLN*PLAGLS
Trigger: GGATAAGCCTGCCAAAGGCCAGTTTAAAGAAGAAAG...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCACTTTCTTCTTTAAACTaGCCTTTGGCAGGCTTATCC +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLALSSLN*PLAGLS
Trigger: GGATAAGCCTGCCAAAGGCCAGTTTAAAGAAGAAAG...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAACGAATGGGCAAAATTaGGTCTGTTTTCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLATNGQN*VCFLSF
Trigger: GAAGGAGAGAAAACAGACCCAATTTTGCCCATTCGT...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CCA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAACGAATGGGCAAAATTaGGTCTGTTTTCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: DQPTQSTVTCFINTETAPTNGQN*VCFLSF
Trigger: GAAGGAGAGAAAACAGACCCAATTTTGCCCATTCGT...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR GCA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCATCAGGTAACAGTCACTaGTTAACTGAAACCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LHHTHLNLIANEQTQHLASGNSH*LTETLF
Trigger: AAAAAGGGTTTCAGTTAAGCAGTGACTGTTACCTGA...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490721.5
3UTR CAA 72 bp CCTGCTTTATTAACACAGAAACTGCACCACACACATTaGAACCTCATAGCCAATGAACAGACCCAGCACTTA +
Preference number: 4 (lower is better)
Translates to: PALLTQKLHHTH*NLIANEQTQHL
Trigger: TAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTGTGTTAATAAAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS TCA 90 bp ATAAGTCGGCGTGGCGCCGCGGTGGGTGTTGAGAGGCCCGCGAACTaGCGGGCCAGTGAGCGGGCGTCGGGAGTGGGCGGATGCGTTGGG +
Preference number: 5 (lower is better)
Translates to: ISRRGAAVGVERPAN*RASERASGVGGCVG
Trigger: CCCAACGCATCCGCCCACTCCCGACGCCCGCTCACTGGCCCGTCAGTTCGCGGGCCTCTCAACACCCACCGCGGCGCCACGCCGACTTAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464510.5
CDS TCA 90 bp GGCGTCGGGAGTGGGCGGATGCGTTGGGGTTCGGGTCGTGGGTGTTaGGGCGGAGAGGAAGGCGTGGTGTGGCGTCTCCAGGTGATTGCG +
Preference number: 5 (lower is better)
Translates to: GVGSGRMRWGSGRGC*GGEEGVVWRLQVIA
Trigger: CGCAATCACCTGGAGACGCCACACCACGCCTTCCTCTCCGCCTCAACACCCACGACCCGAACCCCAACGCATCCGCCCACTCCCGACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464510.5
CDS TCA 90 bp GTGGGTGTTGAGGCGGAGAGGAAGGCGTGGTGTGGCGTCTCCAGGTaGTTGCGATTGGGGGAAGGTAGAGGAGCCAGAGAACGACTCAGC +
Preference number: 5 (lower is better)
Translates to: VGVEAERKAWCGVSR*LRLGEGRGARERLS
Trigger: GCTGAGTCGTTCTCTGGCTCCTCTACCTTCCCCCAATCGCAATCACCTGGAGACGCCACACCACGCCTTCCTCTCCGCCTCAACACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464510.5
CDS-3UTR CAA 90 bp GGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCTGGGCCAGGGGTAACCGTATaGCTTGGCCCAGATGATGGA +
Preference number: 5 (lower is better)
Translates to: GPGHWRLRPQGGHFQPPGPGVTV*LGPDDG
Trigger: TCCATCATCTGGGCCAAGCAATACGGTTACCCCTGG...CCCAGGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS GCA 90 bp GTGTTGAGGCGGAGAGGAAGGCGTGGTGTGGCGTCTCCAGGTGATTaGGATTGGGGGAAGGTAGAGGAGCCAGAGAACGACTCAGCCGTT +
Preference number: 5 (lower is better)
Translates to: VLRRRGRRGVASPGD*DWGKVEEPENDSAV
Trigger: AACGGCTGAGTCGTTCTCTGGCTCCTCTACCTTCCCCCAATCGCAATCACCTGGAGACGCCACACCACGCCTTCCTCTCCGCCTCAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464510.5
CDS-3UTR CAA 90 bp TGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCCCAGGGGTAACCGTATaGCTTGGCCCAGATGATGGA +
Preference number: 5 (lower is better)
Translates to: CSRSRSLEASSSRGTLPAPGVTV*LGPDDG
Trigger: TCCATCATCTGGGCCAAGCAATACGGTTACCCCTGG...GGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CAA 90 bp TGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCCTGGCTGCCAAGGCCTaGCTCTGGGGAGCTTTAAAT +
Preference number: 5 (lower is better)
Translates to: CSRSRSLEASSSRGTLPALAAKA*LWGALN
Trigger: ATTTAAAGCTCCCCAGAGCAAGGCCTTGGCAGCCAG...GGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CAA 90 bp CTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCTCCATTTCCCACAGTTaGGGAAGGAACACTGGACCC +
Preference number: 5 (lower is better)
Translates to: LQVQVTGGFVLKGDTSSLSISHS*GRNTGP
Trigger: GGGTCCAGTGTTCCTTCCCAAACTGTGGGAAATGGA...GAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CAA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGATCCTCGCCATCACTGTaGCTGTGCTGCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGSSPSL*LCCSSP
Trigger: CGGGGAGCTGCAGCACAGCAACAGTGATGGCGAGGA...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp TGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCTTTAAACTGGCCTTaGGCAGGCTTATCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: CSRSRSLEASSSRGTLPASLNWP*AGLSWP
Trigger: AGGCCAGGATAAGCCTGCCAAAGGCCAGTTTAAAGA...GGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CAA 90 bp AGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGATCTGTTCTGCCTCTaGAGCCATCATCAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: SCSRSRSLEASSSRGTLPDLFCL*SHHQGH
Trigger: GTGGCCCTGATGATGGCTCAAGAGGCAGAACAGATC...TGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CAA 90 bp TCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCCAGGCTGTAAGATTTTaGTGCAGGTGGGGCAAAGAT +
Preference number: 5 (lower is better)
Translates to: SRSRSLEASSSRGTLPASQAVRF*CRWGKD
Trigger: ATCTTTGCCCCACCTGCACAAAAATCTTACAGCCTG...GGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CAA 90 bp GTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGGTGCTCATGTCCACCTaGAGTTTTCTCCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: VAPGPGHWRLRPQGGHFQVLMST*SFLHLL
Trigger: GAGAAGGTGGAGAAAACTCAAGGTGGACATGAGCAC...CTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CAA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGATCTGTTCTGCCTCTaGAGCCATCATCAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKDLFCL*SHHQGH
Trigger: GTGGCCCTGATGATGGCTCAAGAGGCAGAACAGATC...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp ATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGCTGGCTGCCAAGGCCTaGCTCTGGGGAGCTTTAAAT +
Preference number: 5 (lower is better)
Translates to: IFHELLQVQVTGGFVLKGLAAKA*LWGALN
Trigger: ATTTAAAGCTCCCCAGAGCAAGGCCTTGGCAGCCAG...CCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CAA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGCTGGCTGCCAAGGCCTaGCTCTGGGGAGCTTTAAAT +
Preference number: 5 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKLAAKA*LWGALN
Trigger: ATTTAAAGCTCCCCAGAGCAAGGCCTTGGCAGCCAG...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp TCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCACTTATCTCTCCTTTTaGCTGGTCCCTGATCTGAGA +
Preference number: 5 (lower is better)
Translates to: SRSRSLEASSSRGTLPASTYLSF*LVPDLR
Trigger: TCTCAGATCAGGGACCAGCAAAAAGGAGAGATAAGT...GGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CAA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGTCCATTTCCCACAGTTaGGGAAGGAACACTGGACCC +
Preference number: 5 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKSISHS*GRNTGP
Trigger: GGGTCCAGTGTTCCTTCCCAAACTGTGGGAAATGGA...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp TCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTCCAAGTTCTTTAGCATGTaGACTGGGATCCATGCACGA +
Preference number: 5 (lower is better)
Translates to: SRSRSLEASSSRGTLPASKFFSM*TGIHAR
Trigger: TCGTGCATGGATCCCAGTCAACATGCTAAAGAACTT...GGAGGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CAA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGAGATCTGTTCTGCCTCTaGAGCCATCATCAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGDLFCL*SHHQGH
Trigger: GTGGCCCTGATGATGGCTCAAGAGGCAGAACAGATC...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS TCA 90 bp CTATCATGCCTGGCCACCAGGGGTAACCGTATTGCTTGGCCCAGATaGTGGATCCTGGGATGTAGGAGGCATAGGCCACATCACTCTCAA +
Preference number: 5 (lower is better)
Translates to: LSCLATRGNRIAWPR*WILGCRRHRPHHSQ
Trigger: TTGAGAGTGATGTGGCCTATGCCTCCTACATCCCAGGATCCATCATCTGGGCCAAGCAATACGGTTACCCCTGGTGGCCAGGCATGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000471336.1
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS-3UTR CAA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGATCCATTTCCCACAGTTaGGGAAGGAACACTGGACCC +
Preference number: 5 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGSISHS*GRNTGP
Trigger: GGGTCCAGTGTTCCTTCCCAAACTGTGGGAAATGGA...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CCCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAACATCTTCCATGAGTaGCTCCAGGTCCAGGTCACT +
Preference number: 5 (lower is better)
Translates to: PNIFHELLQVQVTGGFVLNIFHE*LQVQVT
Trigger: AGTGACCTGGACCTGGAGCAACTCATGGAAGATGTT...GAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CAA 90 bp TGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCCTTCTTTCTTCTCTGCTaGCTTGTTGATTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: CSRSRSLEASSSRGTLPAFFLLC*LVDLCL
Trigger: AAGGCACAAATCAACAAGCAAGCAGAGAAGAAAGAA...GGCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CAA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGAGTGCTCATGTCCACCTaGAGTTTTCTCCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGVLMST*SFLHLL
Trigger: GAGAAGGTGGAGAAAACTCAAGGTGGACATGAGCAC...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp AACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGTCCATTTCCCACAGTTaGGGAAGGAACACTGGACCC +
Preference number: 5 (lower is better)
Translates to: NIFHELLQVQVTGGFVLKSISHS*GRNTGP
Trigger: GGGTCCAGTGTTCCTTCCCAAACTGTGGGAAATGGA...CTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CAA 90 bp TCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACATTACTGTTAGATCCGTaGAATCGGCTCCAGAAACCA +
Preference number: 5 (lower is better)
Translates to: SMSCSRSRSLEASSSRGTLLLDP*NRLQKP
Trigger: TGGTTTCTGGAGCCGATTCAACGGATCTAACAGTAA...TGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CAA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCATCCTCGCCATCACTGTaGCTGTGCTGCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: RDQPTQSTVTCFINTETASSPSL*LCCSSP
Trigger: CGGGGAGCTGCAGCACAGCAACAGTGATGGCGAGGA...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR CAA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGACAGGCTGTAAGATTTTaGTGCAGGTGGGGCAAAGAT +
Preference number: 5 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGQAVRF*CRWGKD
Trigger: ATCTTTGCCCCACCTGCACAAAAATCTTACAGCCTG...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp TTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCAGCTTCTTCTCTGCTTGCTaGTTGATTTGTGCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: LLQVQVTGGFVLKGDTSSFFSAC*LICAFL
Trigger: AAGAAAGGCACAAATCAACAAGCAAGCAGAGAAGAA...GCTGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CAA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGTAATTCCTGGCTCCTaGTCTGATTGGGTAGATACT +
Preference number: 5 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKVIPGS*SDWVDT
Trigger: AGTATCTACCCAATCAGACAAGGAGCCAGGAATTAC...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp AACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGAACATCTTCCATGAGTaGCTCCAGGTCCAGGTCACT +
Preference number: 5 (lower is better)
Translates to: NIFHELLQVQVTGGFVLKNIFHE*LQVQVT
Trigger: AGTGACCTGGACCTGGAGCAACTCATGGAAGATGTT...CTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000471336.1
CDS-3UTR CAA 90 bp ATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGCTGCACCACACACATTaGAACCTCATAGCCAATGAA +
Preference number: 5 (lower is better)
Translates to: IFHELLQVQVTGGFVLKGLHHTH*NLIANE
Trigger: TTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG...CCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCATGGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS TCA 90 bp CTGCACATCTGTGTTCTGATCACAGGACCAATTATCTGGGAGAACTaGGGGGTCAATGTTCCCACACAGCCGCCTCCATTTCCCACAGTT +
Preference number: 5 (lower is better)
Translates to: LHICVLITGPIIWEN*GVNVPTQPPPFPTV
Trigger: AACTGTGGGAAATGGAGGCGGCTGTGTGGGAACATTGACCCCTCAGTTCTCCCAGATAATTGGTCCTGTGATCAGAACACAGATGTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000471336.1
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS GCA 90 bp CTTCTTTCCTTCCCATTCTGGGTGCAGGAGGAGCTGTGGATTTCCTaGCTAGAGATCTCTTCATTATCTTCCTCTGCAGTGTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LLSFPFWVQEELWIS*LEISSLSSSAVSCL
Trigger: GAGGCAGGACACTGCAGAGGAAGATAATGAAGAGATCTCTAGGCAGGAAATCCACAGCTCCTCCTGCACCCAGAATGGGAAGGAAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398027.6
ENST00000479315.1
ENST00000684423.1
CDS-3UTR CAA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGAGTAATTCCTGGCTCCTaGTCTGATTGGGTAGATACT +
Preference number: 5 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGVIPGS*SDWVDT
Trigger: AGTATCTACCCAATCAGACAAGGAGCCAGGAATTAC...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGAACTTATCTCTCCTTTTaGCTGGTCCCTGATCTGAGA +
Preference number: 5 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGTYLSF*LVPDLR
Trigger: TCTCAGATCAGGGACCAGCAAAAAGGAGAGATAAGT...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCACCAGGGGTAACCGTATaGCTTGGCCCAGATGATGGA +
Preference number: 5 (lower is better)
Translates to: DQPTQSTVTCFINTETAPPGVTV*LGPDDG
Trigger: TCCATCATCTGGGCCAAGCAATACGGTTACCCCTGG...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCACTGGCTGCCAAGGCCTaGCTCTGGGGAGCTTTAAAT +
Preference number: 5 (lower is better)
Translates to: DQPTQSTVTCFINTETAPLAAKA*LWGALN
Trigger: ATTTAAAGCTCCCCAGAGCAAGGCCTTGGCAGCCAG...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGACTGCACCACACACATTaGAACCTCATAGCCAATGAA +
Preference number: 5 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGLHHTH*NLIANE
Trigger: TTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGTACGAATGGGCAAAATaGGGTCTGTTTTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKYEWAK*GLFSLL
Trigger: AAGGAGAGAAAACAGACCCAATTTTGCCCATTCGTA...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp AGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTCCACTTTATTCTGCAACGTaGTCATCATTCAGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: SCSRSRSLEASSSRGTLPLYSAT*SSFSLE
Trigger: TTCTAAGCTGAATGATGACAACGTTGCAGAATAAAG...TGGAAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CAA 90 bp TGCCCCAGCTCTCTCCCAACATCTTCCATGAGTTGCTCCAGGTCCAGGTCACTGCTTAAGGTGAGTCTATaGGATTTCTTCTTAGAGGGT +
Preference number: 5 (lower is better)
Translates to: CPSSLPTSSMSCSRSRSLLKVSL*DFFLEG
Trigger: ACCCTCTAAGAAGAAATCCAATAGACTCACCTTAAG...CAGTGACCTGGACCTGGAGCAACTCATGGAAGATGTTGGGAGAGAGCTGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CAA 90 bp ATGAGTTGCTCCAGGTCCAGGTCACTGGAGGCTTCGTCCTCAAGGGGGACACTTGCTTCCTTCTTTCTTTaGCTTAAGGTGAGTCTATTG +
Preference number: 5 (lower is better)
Translates to: MSCSRSRSLEASSSRGTLASFFL*LKVSLL
Trigger: CAATAGACTCACCTTAAGCAAAAGAAAGAAGGAAGC...AAGTGTCCCCCTTGAGGACGAAGCCTCCAGTGACCTGGACCTGGAGCAACTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360951.8
CDS-3UTR CAA 90 bp GCCAATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGCTTTATTCTGCAACGTaGTCATCATTCAGCTTAGAA +
Preference number: 5 (lower is better)
Translates to: ANEQTQHLATSPSCAPEKLYSAT*SSFSLE
Trigger: TTCTAAGCTGAATGATGACAACGTTGCAGAATAAAG...CTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360951.8
ENST00000398027.6
CDS-3UTR CAA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAGTGCTCATGTCCACCTaGAGTTTTCTCCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: DQPTQSTVTCFINTETAPVLMST*SFLHLL
Trigger: GAGAAGGTGGAGAAAACTCAAGGTGGACATGAGCAC...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACAACATCTTCCATGAGTaGCTCCAGGTCCAGGTCACT +
Preference number: 5 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHNIFHE*LQVQVT
Trigger: AGTGACCTGGACCTGGAGCAACTCATGGAAGATGTT...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCAAACATCTTCCATGAGTaGCTCCAGGTCCAGGTCACT +
Preference number: 5 (lower is better)
Translates to: LHHTHLNLIANEQTQHLANIFHE*LQVQVT
Trigger: AGTGACCTGGACCTGGAGCAACTCATGGAAGATGTT...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp AATGAACAGACCCAGCACTTAGCAACTTCTCCCTCCTGCGCCCCAGAGAAGGGATTCTCTGCTTGCTTGTaGATTTGTGCCTTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: NEQTQHLATSPSCAPEKGFSACL*ICAFLF
Trigger: AAAAAGAAAGGCACAAATCAACAAGCAAGCAGAGAA...TCCCTTCTCTGGGGCGCAGGAGGGAGAAGTTGCTAAGTGCTGGGTCTGTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS CCA 90 bp TCATTTCTGCGCTTTTTCATGACTGATAGCTCCAGGGACAGCTCCTaGAAGTTCTTTAGCATGTTGACTGGGATCCATGCACGAGAAACT +
Preference number: 5 (lower is better)
Translates to: SFLRFFMTDSSRDSS*KFFSMLTGIHARET
Trigger: AGTTTCTCGTGCATGGATCCCAGTCAACATGCTAAAGAACTTCCAGGAGCTGTCCCTGGAGCTATCAGTCATGAAAAAGCGCAGAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS-3UTR CAA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAGTAATTCCTGGCTCCTaGTCTGATTGGGTAGATACT +
Preference number: 5 (lower is better)
Translates to: DQPTQSTVTCFINTETAPVIPGS*SDWVDT
Trigger: AGTATCTACCCAATCAGACAAGGAGCCAGGAATTAC...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACAAGTTCTTTAGCATGTaGACTGGGATCCATGCACGA +
Preference number: 5 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHKFFSM*TGIHAR
Trigger: TCGTGCATGGATCCCAGTCAACATGCTAAAGAACTT...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTACTGTTAGATCCGTaGAATCGGCTCCAGAAACCA +
Preference number: 5 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHLLLDP*NRLQKP
Trigger: TGGTTTCTGGAGCCGATTCAACGGATCTAACAGTAA...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCATTACTGTTAGATCCGTaGAATCGGCTCCAGAAACCA +
Preference number: 5 (lower is better)
Translates to: LHHTHLNLIANEQTQHLALLLDP*NRLQKP
Trigger: TGGTTTCTGGAGCCGATTCAACGGATCTAACAGTAA...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACCTGCACCACACACATTaGAACCTCATAGCCAATGAA +
Preference number: 5 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHLHHTH*NLIANE
Trigger: TTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCATTTTGGGTCTGTATTTaGACTCGCTTACGAATGGGC +
Preference number: 5 (lower is better)
Translates to: DQPTQSTVTCFINTETAPFWVCI*TRLRMG
Trigger: GCCCATTCGTAAGCGAGTCAAAATACAGACCCAAAA...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCATTTTGGGTCTGTATTTaGACTCGCTTACGAATGGGC +
Preference number: 5 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAFWVCI*TRLRMG
Trigger: GCCCATTCGTAAGCGAGTCAAAATACAGACCCAAAA...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS TCA 90 bp ATTATCAGTATCAGTAGCAGAAGCAGTAATTCCTGGCTCCTTGTCTaGTTGGGTAGATACTACGGGCTGGGCACAAGAAGTCTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: IISISSRSSNSWLLV*LGRYYGLGTRSLCK
Trigger: TTTGCAGAGACTTCTTGTGCCCAGCCCGTAGTATCTACCCAATCAGACAAGGAGCCAGGAATTACTGCTTCTGCTACTGATACTGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS-3UTR CAA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCATACGAATGGGCAAAATaGGGTCTGTTTTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAYEWAK*GLFSLL
Trigger: AAGGAGAGAAAACAGACCCAATTTTGCCCATTCGTA...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTCTTGGCTTGGTTTTTaGGGTCTGTATTTTGACTCG +
Preference number: 5 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHSWLGF*GLYFDS
Trigger: CGAGTCAAAATACAGACCCAAAAAACCAAGCCAAGA...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCATCTTGGCTTGGTTTTTaGGGTCTGTATTTTGACTCG +
Preference number: 5 (lower is better)
Translates to: LHHTHLNLIANEQTQHLASWLGF*GLYFDS
Trigger: CGAGTCAAAATACAGACCCAAAAAACCAAGCCAAGA...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCATTCTTCTCTGCTTGCTaGTTGATTTGTGCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: DQPTQSTVTCFINTETAPFFSAC*LICAFL
Trigger: AAGAAAGGCACAAATCAACAAGCAAGCAGAGAAGAA...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTAGCATTCTTTCTTCTCTGCTaGCTTGTTGATTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LHHTHLNLIANEQTQHLAFFLLC*LVDLCL
Trigger: AAGGCACAAATCAACAAGCAAGCAGAGAAGAAAGAA...TGCTAAGTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCACTTAAGGTGAGTCTATaGGATTTCTTCTTAGAGGGT +
Preference number: 5 (lower is better)
Translates to: DQPTQSTVTCFINTETAPLKVSL*DFFLEG
Trigger: ACCCTCTAAGAAGAAATCCAATAGACTCACCTTAAG...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCAGCTTCCTTCTTTCTTTaGCTTAAGGTGAGTCTATTG +
Preference number: 5 (lower is better)
Translates to: DQPTQSTVTCFINTETAPASFFL*LKVSLL
Trigger: CAATAGACTCACCTTAAGCAAAAGAAAGAAGGAAGC...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp CAGAAACTGCACCACACACATTTGAACCTCATAGCCAATGAACAGACCCAGCACTTCTCTGCTTGCTTGTaGATTTGTGCCTTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: QKLHHTHLNLIANEQTQHFSACL*ICAFLF
Trigger: AAAAAGAAAGGCACAAATCAACAAGCAAGCAGAGAA...GTGCTGGGTCTGTTCATTGGCTATGAGGTTCAAATGTGTGTGGTGCAGTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp GACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCACCATTCTCTGCTTGCTTGTaGATTTGTGCCTTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: DQPTQSTVTCFINTETAPFSACL*ICAFLF
Trigger: AAAAAGAAAGGCACAAATCAACAAGCAAGCAGAGAA...TGGTGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000490721.5
CDS-3UTR CAA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCATTCTTCTCTGCTTGCTaGTTGATTTGTGCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: RDQPTQSTVTCFINTETAFFSAC*LICAFL
Trigger: AAGAAAGGCACAAATCAACAAGCAAGCAGAGAAGAA...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS-3UTR CAA 90 bp AGAGACCAGCCAACCCAGTCGACTGTAACCTGCTTTATTAACACAGAAACTGCATTCTTTCTTCTCTGCTaGCTTGTTGATTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: RDQPTQSTVTCFINTETAFFLLC*LVDLCL
Trigger: AAGGCACAAATCAACAAGCAAGCAGAGAAGAAAGAA...TGCAGTTTCTGTGTTAATAAAGCAGGTTACAGTCGACTGGGTTGGCTGGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398027.6
CDS TCA 72 bp CGTGGCGCCGCGGTGGGTGTTGAGAGGCCCGCGAACTaGCGGGCCAGTGAGCGGGCGTCGGGAGTGGGCGGA +
Preference number: 6 (lower is better)
Translates to: RGAAVGVERPAN*RASERASGVGG
Trigger: TCCGCCCACTCCCGACGCCCGCTCACTGGCCCGTCAGTTCGCGGGCCTCTCAACACCCACCGCGGCGCCACG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464510.5
CDS CCA 72 bp CACCCCTGCCGCCCTGTCCTCGGCCCAGCACTCCGCTaGCAGGGAGACCGGGCGGCGCATCTCCCCGGGAAA +
Preference number: 6 (lower is better)
Translates to: HPCRPVLGPALR*QGDRAAHLPGK
Trigger: TTTCCCGGGGAGATGCGCCGCCCGGTCTCCCTGCCAGCGGAGTGCTGGGCCGAGGACAGGGCGGCAGGGGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398027.6
ENST00000464510.5
ENST00000472716.1
ENST00000684423.1
CDS CCA 72 bp CCGCGAACTGACGGGCCAGTGAGCGGGCGTCGGGAGTaGGCGGATGCGTTGGGGTTCGGGTCGTGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: PRTDGPVSGRRE*ADALGFGSWVL
Trigger: CAACACCCACGACCCGAACCCCAACGCATCCGCCCACTCCCGACGCCCGCTCACTGGCCCGTCAGTTCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464510.5
CDS CAA 72 bp GGGCCAGTGAGCGGGCGTCGGGAGTGGGCGGATGCGTaGGGGTTCGGGTCGTGGGTGTTGAGGCGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: GPVSGRREWADA*GFGSWVLRRRG
Trigger: TCCTCTCCGCCTCAACACCCACGACCCGAACCCCAACGCATCCGCCCACTCCCGACGCCCGCTCACTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464510.5
CDS CAA 90 bp CGAACTGACGGGCCAGTGAGCGGGCGTCGGGAGTGGGCGGATGCGTaGGGGTTCGGGTCGTGGGTGTTGAGGCGGAGAGGAAGGCGTGGT +
Preference number: 6 (lower is better)
Translates to: RTDGPVSGRREWADA*GFGSWVLRRRGRRG
Trigger: ACCACGCCTTCCTCTCCGCCTCAACACCCACGACCCGAACCCCAACGCATCCGCCCACTCCCGACGCCCGCTCACTGGCCCGTCAGTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464510.5
CDS CCA 72 bp AGCGCGGACCGAACCCCCGTCCCCGCCCACACTCGCTaGTATATAAGTCGGCGTGGCGCCGCGGTGGGTGTT +
Preference number: 6 (lower is better)
Translates to: SADRTPVPAHTR*YISRRGAAVGV
Trigger: AACACCCACCGCGGCGCCACGCCGACTTATATACCAGCGAGTGTGGGCGGGGACGGGGGTTCGGTCCGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464510.5
ENST00000472716.1
CDS TCA 72 bp AGTGGGCGGATGCGTTGGGGTTCGGGTCGTGGGTGTTaGGGCGGAGAGGAAGGCGTGGTGTGGCGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: SGRMRWGSGRGC*GGEEGVVWRLQ
Trigger: CTGGAGACGCCACACCACGCCTTCCTCTCCGCCTCAACACCCACGACCCGAACCCCAACGCATCCGCCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464510.5
CDS TCA 72 bp GAGGCGGAGAGGAAGGCGTGGTGTGGCGTCTCCAGGTaGTTGCGATTGGGGGAAGGTAGAGGAGCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: EAERKAWCGVSR*LRLGEGRGARE
Trigger: TTCTCTGGCTCCTCTACCTTCCCCCAATCGCAATCACCTGGAGACGCCACACCACGCCTTCCTCTCCGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464510.5
CDS CCA 72 bp GGAAGGCGTGGTGTGGCGTCTCCAGGTGATTGCGATTaGGGGAAGGTAGAGGAGCCAGAGAACGACTCAGCC +
Preference number: 6 (lower is better)
Translates to: GRRGVASPGDCD*GKVEEPENDSA
Trigger: GGCTGAGTCGTTCTCTGGCTCCTCTACCTTCCCCCAATCGCAATCACCTGGAGACGCCACACCACGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464510.5
CDS GCA 72 bp CATTATCTTCCTCTGCAGTGTCCTGCCTCGGCCATCTaGTGTGCCTGCATCACCCCCAAGCCCTCTTGGCTT +
Preference number: 6 (lower is better)
Translates to: HYLPLQCPASAI*CACITPKPSWL
Trigger: AAGCCAAGAGGGCTTGGGGGTGATGCAGGCACAGCAGATGGCCGAGGCAGGACACTGCAGAGGAAGATAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398027.6
ENST00000684423.1
CDS TCA 72 bp CTGGCCACCAGGGGTAACCGTATTGCTTGGCCCAGATaGTGGATCCTGGGATGTAGGAGGCATAGGCCACAT +
Preference number: 6 (lower is better)
Translates to: LATRGNRIAWPR*WILGCRRHRPH
Trigger: ATGTGGCCTATGCCTCCTACATCCCAGGATCCATCATCTGGGCCAAGCAATACGGTTACCCCTGGTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000471336.1
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS CAA 90 bp CTGAGGGGTCAATGTTCCCACACAGCCGCCTCCATTTCCCACAGTTaGGGAAGGAACACTGGACCCAGACCAGACATTGACCAAAACCAC +
Preference number: 6 (lower is better)
Translates to: LRGQCSHTAASISHS*GRNTGPRPDIDQNH
Trigger: GTGGTTTTGGTCAATGTCTGGTCTGGGTCCAGTGTTCCTTCCCAAACTGTGGGAAATGGAGGCGGCTGTGTGGGAACATTGACCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS GCA 72 bp CTAGAGATCTCTTCATTATCTTCCTCTGCAGTGTCCTaGCTCGGCCATCTGCTGTGCCTGCATCACCCCCAA +
Preference number: 6 (lower is better)
Translates to: LEISSLSSSAVS*LGHLLCLHHPQ
Trigger: TTGGGGGTGATGCAGGCACAGCAGATGGCCGAGGCAGGACACTGCAGAGGAAGATAATGAAGAGATCTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398027.6
ENST00000479315.1
ENST00000684423.1
CDS CCA 72 bp AATGTTCCCACACAGCCGCCTCCATTTCCCACAGTTTaGGAAGGAACACTGGACCCAGACCAGACATTGACC +
Preference number: 6 (lower is better)
Translates to: NVPTQPPPFPTV*EGTLDPDQTLT
Trigger: GGTCAATGTCTGGTCTGGGTCCAGTGTTCCTTCCCAAACTGTGGGAAATGGAGGCGGCTGTGTGGGAACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000471336.1
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS CCA 72 bp GGGGTAACCGTATTGCTTGGCCCAGATGATGGATCCTaGGATGTAGGAGGCATAGGCCACATCACTCTCAAG +
Preference number: 6 (lower is better)
Translates to: GVTVLLGPDDGS*DVGGIGHITLK
Trigger: CTTGAGAGTGATGTGGCCTATGCCTCCTACATCCCAGGATCCATCATCTGGGCCAAGCAATACGGTTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000471336.1
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS CAA 72 bp GTTAACCCGTTCCTGAATGCTGATCTGTTCTGCCTCTaGAGCCATCATCAGGGCCACCCCCAGTTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: VNPFLNADLFCL*SHHQGHPQFLA
Trigger: AGCCAGAAACTGGGGGTGGCCCTGATGATGGCTCAAGAGGCAGAACAGATCAGCATTCAGGAACGGGTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS GCA 72 bp TTGGGTAGATACTACGGGCTGGGCACAAGAAGTCTCTaGAAAATCAAGGCCAGATCCCATCCCCAAGCACTC +
Preference number: 6 (lower is better)
Translates to: LGRYYGLGTRSL*KIKARSHPQAL
Trigger: GAGTGCTTGGGGATGGGATCTGGCCTTGATTTTGCAGAGACTTCTTGTGCCCAGCCCGTAGTATCTACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000684423.1
CDS CAA 90 bp ACCAAACAAGTTAACCCGTTCCTGAATGCTGATCTGTTCTGCCTCTaGAGCCATCATCAGGGCCACCCCCAGTTTCTGGCTGCAGTCATT +
Preference number: 6 (lower is better)
Translates to: TKQVNPFLNADLFCL*SHHQGHPQFLAAVI
Trigger: AATGACTGCAGCCAGAAACTGGGGGTGGCCCTGATGATGGCTCAAGAGGCAGAACAGATCAGCATTCAGGAACGGGTTAACTTGTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS GCA 72 bp TTGGGTAGATACTACGGGCTGGGCACAAGAAGTCTCTaGAAAATCAAGGCCAGATCCCATCCCTCCCAAAAC +
Preference number: 6 (lower is better)
Translates to: LGRYYGLGTRSL*KIKARSHPSQN
Trigger: GTTTTGGGAGGGATGGGATCTGGCCTTGATTTTGCAGAGACTTCTTGTGCCCAGCCCGTAGTATCTACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490089.1
CDS CCA 72 bp CCTGGCTCCTTGTCTGATTGGGTAGATACTACGGGCTaGGCACAAGAAGTCTCTGCAAAATCAAGGCCAGAT +
Preference number: 6 (lower is better)
Translates to: PGSLSDWVDTTG*AQEVSAKSRPD
Trigger: ATCTGGCCTTGATTTTGCAGAGACTTCTTGTGCCCAGCCCGTAGTATCTACCCAATCAGACAAGGAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS TCA 72 bp TGTGTTCTGATCACAGGACCAATTATCTGGGAGAACTaGGGGGTCAATGTTCCCACACAGCCGCCTCCATTT +
Preference number: 6 (lower is better)
Translates to: CVLITGPIIWEN*GVNVPTQPPPF
Trigger: AAATGGAGGCGGCTGTGTGGGAACATTGACCCCTCAGTTCTCCCAGATAATTGGTCCTGTGATCAGAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000471336.1
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS GCA 72 bp AAACAAGTTAACCCGTTCCTGAATGCTGATCTGTTCTaGCTCTTGAGCCATCATCAGGGCCACCCCCAGTTT +
Preference number: 6 (lower is better)
Translates to: KQVNPFLNADLF*LLSHHQGHPQF
Trigger: AAACTGGGGGTGGCCCTGATGATGGCTCAAGAGGCAGAACAGATCAGCATTCAGGAACGGGTTAACTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS TCA 72 bp ATCAGTAGCAGAAGCAGTAATTCCTGGCTCCTTGTCTaGTTGGGTAGATACTACGGGCTGGGCACAAGAAGT +
Preference number: 6 (lower is better)
Translates to: ISSRSSNSWLLV*LGRYYGLGTRS
Trigger: ACTTCTTGTGCCCAGCCCGTAGTATCTACCCAATCAGACAAGGAGCCAGGAATTACTGCTTCTGCTACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS CCA 72 bp CTATTGGATTTCTTCTTAGAGGGTGCAGGATCTGGCTaGCCTAACTTAGATGTCCTTATCTCAGGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: LLDFFLEGAGSG*PNLDVLISGAA
Trigger: AGCTGCCCCTGAGATAAGGACATCTAAGTTAGGCCAGCCAGATCCTGCACCCTCTAAGAAGAAATCCAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS CAA 72 bp TCAGTATCAGTAGCAGAAGCAGTAATTCCTGGCTCCTaGTCTGATTGGGTAGATACTACGGGCTGGGCACAA +
Preference number: 6 (lower is better)
Translates to: SVSVAEAVIPGS*SDWVDTTGWAQ
Trigger: TTGTGCCCAGCCCGTAGTATCTACCCAATCAGACAAGGAGCCAGGAATTACTGCTTCTGCTACTGATACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS TCA 72 bp GGGGCAGCTTCACCTTCCCAAGACACTGAAATCTCTTaGGTATGTGGTACCTCCTCTCCATTAGCATTATCA +
Preference number: 6 (lower is better)
Translates to: GAASPSQDTEIS*VCGTSSPLALS
Trigger: TGATAATGCTAATGGAGAGGAGGTACCACATACTCAAGAGATTTCAGTGTCTTGGGAAGGTGAAGCTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS GCA 72 bp TTGGGTAGATACTACGGGCTGGGCACAAGAAGTCTCTaGAAAATCAAGGCCAGATCCCATCCCTTATTTAGA +
Preference number: 6 (lower is better)
Translates to: LGRYYGLGTRSL*KIKARSHPLFR
Trigger: TCTAAATAAGGGATGGGATCTGGCCTTGATTTTGCAGAGACTTCTTGTGCCCAGCCCGTAGTATCTACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490721.5
CDS CAA 90 bp TTAGCATTATCAGTATCAGTAGCAGAAGCAGTAATTCCTGGCTCCTaGTCTGATTGGGTAGATACTACGGGCTGGGCACAAGAAGTCTCT +
Preference number: 6 (lower is better)
Translates to: LALSVSVAEAVIPGS*SDWVDTTGWAQEVS
Trigger: AGAGACTTCTTGTGCCCAGCCCGTAGTATCTACCCAATCAGACAAGGAGCCAGGAATTACTGCTTCTGCTACTGATACTGATAATGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS CAA 90 bp CCAGAGAGCTGTAAGTCTTTTCTTTCCCCATTACTGTTAGATCCGTaGAATCGGCTCCAGAAACCAAACAAGTTAACCCGTTCCATGACT +
Preference number: 6 (lower is better)
Translates to: PESCKSFLSPLLLDP*NRLQKPNKLTRSMT
Trigger: AGTCATGGAACGGGTTAACTTGTTTGGTTTCTGGAGCCGATTCAACGGATCTAACAGTAATGGGGAAAGAAAAGACTTACAGCTCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471336.1
CDS CAA 72 bp GACCAGACATTGACCAAAACCACTTATCTCTCCTTTTaGCTGGTCCCTGATCTGAGAATGATCCTGAACTGT +
Preference number: 6 (lower is better)
Translates to: DQTLTKTTYLSF*LVPDLRMILNC
Trigger: ACAGTTCAGGATCATTCTCAGATCAGGGACCAGCAAAAAGGAGAGATAAGTGGTTTTGGTCAATGTCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS CAA 72 bp TCCTTAGGGGAGTTAGGGCTTCTTTATTCTGCAACGTaGTCATCATTCAGCTTAGAAACTACGCTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: SLGELGLLYSAT*SSFSLETTLCV
Trigger: CACACAAAGCGTAGTTTCTAAGCTGAATGATGACAACGTTGCAGAATAAAGAAGCCCTAACTCCCCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472716.1
CDS CAA 72 bp TGTAAGTCTTTTCTTTCCCCATTACTGTTAGATCCGTaGAATCGGCTCCAGAAACCAAACAAGTTAACCCGT +
Preference number: 6 (lower is better)
Translates to: CKSFLSPLLLDP*NRLQKPNKLTR
Trigger: ACGGGTTAACTTGTTTGGTTTCTGGAGCCGATTCAACGGATCTAACAGTAATGGGGAAAGAAAAGACTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000471336.1
ENST00000490089.1
ENST00000490721.5
ENST00000684423.1
CDS GCA 72 bp AATATGTATCTTTCTGCAAGCCTTTCCAGATCGATCTaGCTCATTCCAGGATGGCCAGGTAATGATAATTTT +
Preference number: 6 (lower is better)
Translates to: NMYLSASLSRSI*LIPGWPGNDNF
Trigger: AAAATTATCATTACCTGGCCATCCTGGAATGAGGCAGATCGATCTGGAAAGGCTTGCAGAAAGATACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490089.1
CDS CAA 72 bp TTGGTCCCTTTCCACATTCTTCTTTATTCTGCAACGTaGTCATCATTCAGCTTAGAAACTACGCTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: LVPFHILLYSAT*SSFSLETTLCV
Trigger: CACACAAAGCGTAGTTTCTAAGCTGAATGATGACAACGTTGCAGAATAAAGAAGAATGTGGAAAGGGACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360951.8
ENST00000398027.6
ENST00000464510.5
ENST00000684423.1