RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZCCHC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000168228

Ensembl transcript IDs: ENST00000302874.9, ENST00000505412.1, ENST00000505451.5, ENST00000507760.5, ENST00000612982.1

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTCCAGAGAGGCAGATAAGGGACTGTAAACCAGCAAATGCCACCTaGCTGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCT +
Preference number: 1 (lower is better)
Translates to: SPERQIRDCKPANAT*LLSSSERCTPLEAA
Trigger: AGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACAGGCAGGTGGCATTTGCTGGTTTACAGTCCCTTATCTGCCTCTCTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
3UTR CCA 90 bp ACCACAAATAAAGCAGCCATGTTTGGGGCCCTCACAAGAATGATCTaGAACAGCACAGTGATTGCAGATGCTACAGTGGATCCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: TTNKAAMFGALTRMI*NSTVIADATVDPGR
Trigger: CCTTCCTGGATCCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCCCCAAACATGGCTGCTTTATTTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR GCA 90 bp TGTAAACCAGCAAATGCCACCTGCCTGTTATCTAGCTCAGAAAGGTaGACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTT +
Preference number: 1 (lower is better)
Translates to: CKPANATCLLSSSER*TPLEAAEFKSSVAL
Trigger: AAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACAGGCAGGTGGCATTTGCTGGTTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
3UTR GCA 90 bp CATGTTTGGGGCCCTCACAAGAATGATCTGGAACAGCACAGTGATTaGAGATGCTACAGTGGATCCAGGAAGGCTTTACACACTTTTTAC +
Preference number: 1 (lower is better)
Translates to: HVWGPHKNDLEQHSD*RCYSGSRKALHTFY
Trigger: GTAAAAAGTGTGTAAAGCCTTCCTGGATCCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCCCCAAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR TCA 90 bp AGTACTCTTCTGAATCCGAGGGCAGAAAGTAAGTCTACCAAGAACTaGCAGCTCCGATCAGCAAACAGATACTGGGCATTTGTCTTCTTG +
Preference number: 1 (lower is better)
Translates to: STLLNPRAESKSTKN*QLRSANRYWAFVFL
Trigger: CAAGAAGACAAATGCCCAGTATCTGTTTGCTGATCGGAGCTGTCAGTTCTTGGTAGACTTACTTTCTGCCCTCGGATTCAGAAGAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
3UTR TCA 90 bp TTAGCTCTCTTAGATGTAGCAATGTTAGGACAAGTACTGCGTTTATaGTCCAGTTCACCACAAATAAAGCAGCCATGTTTGGGGCCCTCA +
Preference number: 1 (lower is better)
Translates to: LALLDVAMLGQVLRL*SSSPQIKQPCLGPS
Trigger: TGAGGGCCCCAAACATGGCTGCTTTATTTGTGGTGAACTGGATCATAAACGCAGTACTTGTCCTAACATTGCTACATCTAAGAGAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR CCA 90 bp TGGCATCAAAGGTTGGACCATAAATCTTTCTTATTCTCCAGTCACTaGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCTCCTTT +
Preference number: 1 (lower is better)
Translates to: WHQRLDHKSFLFSSH*TFKSQDIDGLFPSF
Trigger: AAAGGAGGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAAGAAAGATTTATGGTCCAACCTTTGATGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
3UTR-3UTR GCA 90 bp GTGACCTGGCCAAGATCATACAGCCAGGAAATATTAAGGGTAGGAATGAGGAGTTCTAGCTCAGAAAGGTaGACACCTCTGGAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: VTWPRSYSQEILRVGMRSSSSER*TPLEAA
Trigger: AGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGA...ACTCCTCATTCCTACCCTTAATATTTCCTGGCTGTATGATCTTGGCCAGGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR GCA 90 bp GGCCCTCACAAGAATGATCTGGAACAGCACAGTGATTGCAGATGCTACAGTGGAAATGGTTCCATTTCCTaGCATCCTTGGATGTGCAAG +
Preference number: 2 (lower is better)
Translates to: GPHKNDLEQHSDCRCYSGNGSIS*HPWMCK
Trigger: CTTGCACATCCAAGGATGGCAGGAAATGGAACCATT...TCCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR CAA 90 bp CTACCAAGAACTGACAGCTCCGATCAGCAAACAGATACTGGGCATTaGTCTTCTTGTTTTCCAGTGGATAAAGGAGTTGACTGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: LPRTDSSDQQTDTGH*SSCFPVDKGVDWAF
Trigger: GAAGGCCCAGTCAACTCCTTTATCCACTGGAAAACAAGAAGACAAATGCCCAGTATCTGTTTGCTGATCGGAGCTGTCAGTTCTTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612982.1
3UTR-3UTR TCA 90 bp CTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTTTCCTGTGGGCGGAATGTTGGTaGAAATACGCACGGGAGACT +
Preference number: 2 (lower is better)
Translates to: LLWNYLLFNLKCLLQPFLWAECW*KYARET
Trigger: AGTCTCCCGTGCGTATTTTCACCAACATTCCGCCCA...CAGGAAAGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR TCA 90 bp AAAGCAGCCATGTTTGGGGCCCTCACAAGAATGATCTGGAACAGCACAGTGATTAGAGAAACATACCGTTaGCACGGAGAGCAAAATCTG +
Preference number: 2 (lower is better)
Translates to: KAAMFGALTRMIWNSTVIRETYR*HGEQNL
Trigger: CAGATTTTGCTCTCCGTGTCAACGGTATGTTTCTCT...AATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCCCCAAACATGGCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR TCA 90 bp AAGCCACCAAACGGAGGATCCGTCACCATAATGATTCCTTCGCCTTTATCTTCCAGACTTCTTGTCACCTaGTGCTGTCAACTTGATCAG +
Preference number: 2 (lower is better)
Translates to: KPPNGGSVTIMIPSPLSSRLLVT*CCQLDQ
Trigger: CTGATCAAGTTGACAGCATCAGGTGACAAGAAGTCT...GGAAGATAAAGGCGAAGGAATCATTATGGTGACGGATCCTCCGTTTGGTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
3UTR-3UTR CCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCAGGCACTTTCAGAAAATaGCATCAAAGGTTGGACCAT +
Preference number: 2 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSGTFRK*HQRLDH
Trigger: ATGGTCCAACCTTTGATGCCATTTTCTGAAAGTGCC...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
3UTR CAA 90 bp CACGGAGAGCAAAATCTGTACCCTTCTTCAGTAGGAAGGATTATTTaGTTGGGCGGAATGTTGGTGAAAATACGCACGGGAGACTGTTTT +
Preference number: 2 (lower is better)
Translates to: HGEQNLYPSSVGRII*LGGMLVKIRTGDCF
Trigger: AAAACAGTCTCCCGTGCGTATTTTCACCAACATTCCGCCCAACAAAATAATCCTTCCTACTGAAGAAGGGTACAGATTTTGCTCTCCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR GCA 90 bp AAGCATTTAAGTGATTCTAGACCGTCAGAGGACAACTGCAAAAAGTACTTGAAGAGTGAGCTGAGGTTGTaGCATTGCACTCTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: KHLSDSRPSEDNCKKYLKSELRL*HCTLAW
Trigger: CCAGGCTAGAGTGCAATGGCACAACCTCAGCTCACT...CTTCAAGTACTTTTTGCAGTTGTCCTCTGACGGTCTAGAATCACTTAAATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR CCA 90 bp TTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCTCCGGCACTTTCAGAAAATaGCATCAAAGGTTGGACCAT +
Preference number: 2 (lower is better)
Translates to: FSSHWTFKSQDIDGLFPSGTFRK*HQRLDH
Trigger: ATGGTCCAACCTTTGATGCCATTTTCTGAAAGTGCC...GGAGGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505412.1
3UTR-3UTR CCA 90 bp AAGCATGAACTGTCACCCCCTATAACTTTACACATGAGACGTAAAGCCAAGGAGTTGCAGATGCTACAGTaGATCCAGGAAGGCTTTACA +
Preference number: 2 (lower is better)
Translates to: KHELSPPITLHMRRKAKELQMLQ*IQEGFT
Trigger: TGTAAAGCCTTCCTGGATCCACTGTAGCATCTGCAA...CTCCTTGGCTTTACGTCTCATGTGTAAAGTTATAGGGGGTGACAGTTCATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR GCA 90 bp CTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTTTCCTGCCCTCCATCCATCTATaGAGCCAGTACTTAATAGTG +
Preference number: 2 (lower is better)
Translates to: LLWNYLLFNLKCLLQPFLPSIHL*SQYLIV
Trigger: CACTATTAAGTACTGGCTGCATAGATGGATGGAGGG...CAGGAAAGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR CCA 90 bp ATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGATCATACAGATTAGCCAGTCGTGGTaGCATGTGCCTATAATTCCA +
Preference number: 2 (lower is better)
Translates to: IIMKKPGLLESDLAKIIQISQSW*HVPIIP
Trigger: TGGAATTATAGGCACATGCCACCACGACTGGCTAAT...CTGTATGATCTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR TCA 90 bp GTAAAAATGCTCTGCATACTTCAAGGGCAGTCTTTCCATCAAAGAAATGATGGTCACACAGTACTCTTCTaGATCCGAGGGCAGAAAGTA +
Preference number: 2 (lower is better)
Translates to: VKMLCILQGQSFHQRNDGHTVLF*IRGQKV
Trigger: TACTTTCTGCCCTCGGATTCAGAAGAGTACTGTGTG...ACCATCATTTCTTTGATGGAAAGACTGCCCTTGAAGTATGCAGAGCATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612982.1
3UTR-3UTR TCA 90 bp CCTGTAAAAATGCTCTGCATACTTCAAGGGCAGTCTTTCCATCAAAGAAATGATCTGATGCTGTCAACTTaGTCAGCTCATGCAACCTTG +
Preference number: 2 (lower is better)
Translates to: PVKMLCILQGQSFHQRNDLMLST*SAHATL
Trigger: CAAGGTTGCATGAGCTGATCAAGTTGACAGCATCAG...ATCATTTCTTTGATGGAAAGACTGCCCTTGAAGTATGCAGAGCATTTTTACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612982.1
3UTR-3UTR GCA 90 bp ATAATAATGATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGCCAGCAAATGCCACCTaGCTGTTATCTAGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: IIMIIMKKPGLLESDLAKPANAT*LLSSSE
Trigger: TTCTGAGCTAGATAACAGGCAGGTGGCATTTGCTGG...CTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTATCATTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR GCA 90 bp GTGACCTGGCCAAGATCATACAGCCAGGAAATATTAAGGGTAGGAATGAGGAGTAACTATCCTGGCTTCTaGTACGAACTACTTTTACAA +
Preference number: 2 (lower is better)
Translates to: VTWPRSYSQEILRVGMRSNYPGF*YELLLQ
Trigger: TTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTT...ACTCCTCATTCCTACCCTTAATATTTCCTGGCTGTATGATCTTGGCCAGGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR GCA 90 bp ATTTTCCTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTCACAGTGATTGCAGATaGTACAGTGGATCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: IFLLWNYLLFNLKCLLQPHSDCR*YSGSRK
Trigger: CTTCCTGGATCCACTGTAGCATCTGCAATCACTGTG...AGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR GCA 90 bp ATTTTCCTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTGAACAGCACAGTGATTaGAGATGCTACAGTGGATCC +
Preference number: 2 (lower is better)
Translates to: IFLLWNYLLFNLKCLLQPEQHSD*RCYSGS
Trigger: GGATCCACTGTAGCATCTGCAATCACTGTGCTGTTC...AGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR CCA 90 bp GTGACCTGGCCAAGATCATACAGCCAGGAAATATTAAGGGTAGGAATGAGGAGTAATTTAAGTCCAGTGTaGCACTTTCAGAAAATGGCA +
Preference number: 2 (lower is better)
Translates to: VTWPRSYSQEILRVGMRSNLSPV*HFQKMA
Trigger: TGCCATTTTCTGAAAGTGCCACACTGGACTTAAATT...ACTCCTCATTCCTACCCTTAATATTTCCTGGCTGTATGATCTTGGCCAGGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR TCA 90 bp ATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGATCATACAGGGGAGAGACTTAAAGTaGGGAAAAATGAATGCTGAA +
Preference number: 2 (lower is better)
Translates to: IIMKKPGLLESDLAKIIQGRDLK*GKMNAE
Trigger: TTCAGCATTCATTTTTCCTCACTTTAAGTCTCTCCC...CTGTATGATCTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR TCA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCCTTGTAGCAGATGTATaGTTCATGGATTGTCCTTTC +
Preference number: 2 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPLVADV*FMDCPF
Trigger: GAAAGGACAATCCATGAATCATACATCTGCTACAAG...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505412.1
3UTR-3UTR TCA 90 bp AAGCATGAACTGTCACCCCCTATAACTTTACACATGAGACGTAAAGCCAAGGAGAGTAAAGTATTCGACTaGCTTGTTAGCTCTCTTAGA +
Preference number: 2 (lower is better)
Translates to: KHELSPPITLHMRRKAKESKVFD*LVSSLR
Trigger: TCTAAGAGAGCTAACAAGTCAGTCGAATACTTTACT...CTCCTTGGCTTTACGTCTCATGTGTAAAGTTATAGGGGGTGACAGTTCATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR CCA 90 bp ATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGATCATACAGATTACCAAACTATCCTaGCTTCTGCTACGAACTACT +
Preference number: 2 (lower is better)
Translates to: IIMKKPGLLESDLAKIIQITKLS*LLLRTT
Trigger: AGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAAT...CTGTATGATCTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR CCA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCCAGATGTATGATTCATaGATTGTCCTTTCGTGGTCT +
Preference number: 2 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPQMYDS*IVLSWS
Trigger: AGACCACGAAAGGACAATCCATGAATCATACATCTG...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505412.1
3UTR-3UTR CCA 90 bp TGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCATTATTCTCCAGTCACTaGACATTTAAGAGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: CYLAQKGAHLWKQLNLSPLFSSH*TFKSQD
Trigger: ATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA...TGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
3UTR-3UTR GCA 90 bp GTAAAAATGCTCTGCATACTTCAAGGGCAGTCTTTCCATCAAAGAAATGATGGTAACTTGATCAGCTCATaGAACCTTGGTGTTCCAACA +
Preference number: 2 (lower is better)
Translates to: VKMLCILQGQSFHQRNDGNLISS*NLGVPT
Trigger: TGTTGGAACACCAAGGTTGCATGAGCTGATCAAGTT...ACCATCATTTCTTTGATGGAAAGACTGCCCTTGAAGTATGCAGAGCATTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612982.1
3UTR-3UTR CCA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCAATTTAAGTCCAGTGTaGCACTTTCAGAAAATGGCA +
Preference number: 2 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPNLSPV*HFQKMA
Trigger: TGCCATTTTCTGAAAGTGCCACACTGGACTTAAATT...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505412.1
3UTR-3UTR CCA 90 bp ATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGATCATACAGAAAGAACTAGTAAACTaGCTGAAGATGGAACAACTC +
Preference number: 2 (lower is better)
Translates to: IIMKKPGLLESDLAKIIQKELVN*LKMEQL
Trigger: GAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTT...CTGTATGATCTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR CCA 90 bp AATTACCAAACTATCCTGGCTTCTGCTACGAACTACTTTTACAAAGACAGAATCAAAGGTGCACACCTCTaGAAGCAGCTGAATTTAAGT +
Preference number: 2 (lower is better)
Translates to: NYQTILASATNYFYKDRIKGAHL*KQLNLS
Trigger: ACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTT...GATTCTGTCTTTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR TCA 90 bp ACACAGATGGAATACATTTTTCTAGTAAAGTATTCGACTGACTTGTTAGCTCTCCAGAGCTCACAGTGTTaGTTCTCTAGAGAAACATAC +
Preference number: 2 (lower is better)
Translates to: TQMEYIFLVKYSTDLLALQSSQC*FSRETY
Trigger: GTATGTTTCTCTAGAGAATCAACACTGTGAGCTCTG...GAGAGCTAACAAGTCAGTCGAATACTTTACTAGAAAAATGTATTCCATCTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR CAA 90 bp AAAACACAGATGGAATACATTTTTCTAGTAAAGTATTCGACTGACTaGTTAGCTCTCTTAGATGTAGCAATGTTAGGACAAGTACTGCGT +
Preference number: 2 (lower is better)
Translates to: KTQMEYIFLVKYSTD*LALLDVAMLGQVLR
Trigger: ACGCAGTACTTGTCCTAACATTGCTACATCTAAGAGAGCTAACAAGTCAGTCGAATACTTTACTAGAAAAATGTATTCCATCTGTGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR CAA 90 bp GGCCCTCACAAGAATGATCTGGAACAGCACAGTGATTGCAGATGCTACAGTGGATTGTTGGGCGGAATGTaGGTGAAAATACGCACGGGA +
Preference number: 3 (lower is better)
Translates to: GPHKNDLEQHSDCRCYSGLLGGM*VKIRTG
Trigger: TCCCGTGCGTATTTTCACCAACATTCCGCCCAACAA...TCCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR CAA 90 bp GCCAGAGGTTCAACCAAGCCACCAAACGGAGGATCCGTCACCATAATGATTCCTCCTGATGCTGTCAACTaGATCAGCTCATGCAACCTT +
Preference number: 3 (lower is better)
Translates to: ARGSTKPPNGGSVTIMIPPDAVN*ISSCNL
Trigger: AAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGG...AGGAATCATTATGGTGACGGATCCTCCGTTTGGTGGCTTGGTTGAACCTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
3UTR GCA 72 bp AGGCAGATAAGGGACTGTAAACCAGCAAATGCCACCTaGCTGTTATCTAGCTCAGAAAGGTGCACACCTCTG +
Preference number: 3 (lower is better)
Translates to: RQIRDCKPANAT*LLSSSERCTPL
Trigger: CAGAGGTGTGCACCTTTCTGAGCTAGATAACAGGCAGGTGGCATTTGCTGGTTTACAGTCCCTTATCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
3UTR GCA 72 bp GGCCCTCACAAGAATGATCTGGAACAGCACAGTGATTaGAGATGCTACAGTGGATCCAGGAAGGCTTTACAC +
Preference number: 3 (lower is better)
Translates to: GPHKNDLEQHSD*RCYSGSRKALH
Trigger: GTGTAAAGCCTTCCTGGATCCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR CCA 72 bp AAAGCAGCCATGTTTGGGGCCCTCACAAGAATGATCTaGAACAGCACAGTGATTGCAGATGCTACAGTGGAT +
Preference number: 3 (lower is better)
Translates to: KAAMFGALTRMI*NSTVIADATVD
Trigger: ATCCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCCCCAAACATGGCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR CAA 90 bp AAGCATTTAAGTGATTCTAGACCGTCAGAGGACAACTGCAAAAAGTACTTGAAGGCTGAGGTTGTGCCATaGCACTCTAGCCTGGGAGAC +
Preference number: 3 (lower is better)
Translates to: KHLSDSRPSEDNCKKYLKAEVVP*HSSLGD
Trigger: GTCTCCCAGGCTAGAGTGCAATGGCACAACCTCAGC...CTTCAAGTACTTTTTGCAGTTGTCCTCTGACGGTCTAGAATCACTTAAATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR CAA 90 bp GCCTTTCCTGCCATCATGTGTCTATATCTGATCTGTCCCTCAAAGCCTGACGTACATTTCCTGCCATCCTaGGATGTGCAAGAATTACAG +
Preference number: 3 (lower is better)
Translates to: AFPAIMCLYLICPSKPDVHFLPS*DVQELQ
Trigger: CTGTAATTCTTGCACATCCAAGGATGGCAGGAAATG...TACGTCAGGCTTTGAGGGACAGATCAGATATAGACACATGATGGCAGGAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR TCA 72 bp CTGAATCCGAGGGCAGAAAGTAAGTCTACCAAGAACTaGCAGCTCCGATCAGCAAACAGATACTGGGCATTT +
Preference number: 3 (lower is better)
Translates to: LNPRAESKSTKN*QLRSANRYWAF
Trigger: AAATGCCCAGTATCTGTTTGCTGATCGGAGCTGTCAGTTCTTGGTAGACTTACTTTCTGCCCTCGGATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
3UTR GCA 72 bp CACAAGAATGATCTGGAACAGCACAGTGATTGCAGATaGTACAGTGGATCCAGGAAGGCTTTACACACTTTT +
Preference number: 3 (lower is better)
Translates to: HKNDLEQHSDCR*YSGSRKALHTF
Trigger: AAAAGTGTGTAAAGCCTTCCTGGATCCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGATCATTCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR CAA 90 bp AAGCATGAACTGTCACCCCCTATAACTTTACACATGAGACGTAAAGCCAAGGAGGGAAGGATTATTTTGTaGGGCGGAATGTTGGTGAAA +
Preference number: 3 (lower is better)
Translates to: KHELSPPITLHMRRKAKEGRIIL*GGMLVK
Trigger: TTTCACCAACATTCCGCCCAACAAAATAATCCTTCC...CTCCTTGGCTTTACGTCTCATGTGTAAAGTTATAGGGGGTGACAGTTCATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR CAA 90 bp AAGCATGAACTGTCACCCCCTATAACTTTACACATGAGACGTAAAGCCAAGGAGAAAGTGACAATTAACTaGGCACTTCAAGATCCTCTG +
Preference number: 3 (lower is better)
Translates to: KHELSPPITLHMRRKAKEKVTIN*ALQDPL
Trigger: CAGAGGATCTTGAAGTGCCAAGTTAATTGTCACTTT...CTCCTTGGCTTTACGTCTCATGTGTAAAGTTATAGGGGGTGACAGTTCATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR-3UTR CAA 90 bp GTAAAAATGCTCTGCATACTTCAAGGGCAGTCTTTCCATCAAAGAAATGATGGTTCAGCTCATGCAACCTaGGTGTTCCAACACACAGTA +
Preference number: 3 (lower is better)
Translates to: VKMLCILQGQSFHQRNDGSAHAT*VFQHTV
Trigger: TACTGTGTGTTGGAACACCAAGGTTGCATGAGCTGA...ACCATCATTTCTTTGATGGAAAGACTGCCCTTGAAGTATGCAGAGCATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612982.1
3UTR-3UTR CAA 90 bp ATTTTCCTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTGTAGGAAGGATTATTTaGTTGGGCGGAATGTTGGTG +
Preference number: 3 (lower is better)
Translates to: IFLLWNYLLFNLKCLLQPVGRII*LGGMLV
Trigger: CACCAACATTCCGCCCAACAAAATAATCCTTCCTAC...AGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR CCA 72 bp CAGGAAATATTAAGGGTAGGAATGAGGAGTTTAGTTTaGGCGTTTAATTACCAAACTATCCTGGCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: QEILRVGMRSLV*AFNYQTILASA
Trigger: AGCAGAAGCCAGGATAGTTTGGTAATTAAACGCCCAAACTAAACTCCTCATTCCTACCCTTAATATTTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR-3UTR CAA 90 bp GTAAAAATGCTCTGCATACTTCAAGGGCAGTCTTTCCATCAAAGAAATGATGGTTTAATGTTAGACTTCTaGTCACCTGATGCTGTCAAC +
Preference number: 3 (lower is better)
Translates to: VKMLCILQGQSFHQRNDGLMLDF*SPDAVN
Trigger: GTTGACAGCATCAGGTGACAAGAAGTCTAACATTAA...ACCATCATTTCTTTGATGGAAAGACTGCCCTTGAAGTATGCAGAGCATTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612982.1
3UTR CCA 72 bp AGGTTGGACCATAAATCTTTCTTATTCTCCAGTCACTaGACATTTAAGAGCCAAGATATTGATGGGCTCTTT +
Preference number: 3 (lower is better)
Translates to: RLDHKSFLFSSH*TFKSQDIDGLF
Trigger: AAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAAGAAAGATTTATGGTCCAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
3UTR GCA 72 bp ATTAACTTGGCACTTCAAGATCCTCTGAATGTTGCATaGTTTTGTGGATTATCCTGTATAAAACACAGATGG +
Preference number: 3 (lower is better)
Translates to: INLALQDPLNVA*FCGLSCIKHRW
Trigger: CCATCTGTGTTTTATACAGGATAATCCACAAAAGCATGCAACATTCAGAGGATCTTGAAGTGCCAAGTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR TCA 72 bp ACAGATGGAATACATTTTTCTAGTAAAGTATTCGACTaGCTTGTTAGCTCTCTTAGATGTAGCAATGTTAGG +
Preference number: 3 (lower is better)
Translates to: TDGIHFSSKVFD*LVSSLRCSNVR
Trigger: CCTAACATTGCTACATCTAAGAGAGCTAACAAGTCAGTCGAATACTTTACTAGAAAAATGTATTCCATCTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR TCA 90 bp GTGACCTGGCCAAGATCATACAGCCAGGAAATATTAAGGGTAGGAATGAGGAGTAGAAGAGTGGGTCCGTaGGGGCACAGCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VTWPRSYSQEILRVGMRSRRVGP*GHSGAG
Trigger: CCCCGCCCCGCTGTGCCCTCACGGACCCACTCTTCT...ACTCCTCATTCCTACCCTTAATATTTCCTGGCTGTATGATCTTGGCCAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp ATGGTTCCATTTCCTGCCATCCTTGGATGTGCAAGAATTACAGAGCTCACAGTGAGAAGAGTGGGTCCGTaGGGGCACAGCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: MVPFPAILGCARITELTVRRVGP*GHSGAG
Trigger: CCCCGCCCCGCTGTGCCCTCACGGACCCACTCTTCT...CACTGTGAGCTCTGTAATTCTTGCACATCCAAGGATGGCAGGAAATGGAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGAGCTTCCCCGGCACCCTaGGCTGCCCTCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRASPAP*AALCLH
Trigger: GTGGAGGCAGAGGGCAGCGCAGGGTGCCGGGGAAGC...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp GCTCCGATCAGCAAACAGATACTGGGCATTTGTCTTCTTGTTTTCCAGTGGATAAGAAGAGTGGGTCCGTaGGGGCACAGCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: APISKQILGICLLVFQWIRRVGP*GHSGAG
Trigger: CCCCGCCCCGCTGTGCCCTCACGGACCCACTCTTCT...TATCCACTGGAAAACAAGAAGACAAATGCCCAGTATCTGTTTGCTGATCGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR GCA 90 bp GTTGGTGAAAATACGCACGGGAGACTGTTTTCGACCTGTCTTTCCGTGTTTATAGCTTCCCCGGCACCCTaGGCTGCCCTCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VGENTHGRLFSTCLSVFIASPAP*AALCLH
Trigger: GTGGAGGCAGAGGGCAGCGCAGGGTGCCGGGGAAGC...TATAAACACGGAAAGACAGGTCGAAAACAGTCTCCCGTGCGTATTTTCACCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGACCCTGCGCTGCCCTCTaGCTCCACGGCTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRPCAAL*LHGFKP
Trigger: GGGTTTGAAGCCGTGGAGGCAGAGGGCAGCGCAGGG...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR GCA 90 bp AAGCATGAACTGTCACCCCCTATAACTTTACACATGAGACGTAAAGCCAAGGAGCCCTGCGCTGCCCTCTaGCTCCACGGCTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: KHELSPPITLHMRRKAKEPCAAL*LHGFKP
Trigger: GGGTTTGAAGCCGTGGAGGCAGAGGGCAGCGCAGGG...CTCCTTGGCTTTACGTCTCATGTGTAAAGTTATAGGGGGTGACAGTTCATGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCATACCTTTCCACACACTaGGTTCGGGACAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSYLSTH*VRDRGG
Trigger: GCCTCCCCTGTCCCGAACGCAGTGTGTGGAAAGGTA...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CCA 90 bp AGCCAGAGGTTCAACCAAGCCACCAAACGGAGGATCCGTCACCATAATGATTCCTTACAAACAGAAGAGTaGGTCCGTGAGGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: SQRFNQATKRRIRHHNDSLQTEE*VREGTA
Trigger: CGCTGTGCCCTCACGGACCCACTCTTCTGTTTGTAA...GGAATCATTATGGTGACGGATCCTCCGTTTGGTGGCTTGGTTGAACCTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR GCA 90 bp TTCTTGTCACCTGATGCTGTCAACTTGATCAGCTCATGCAACCTTGGTGTTCCAAAGTACCTTCCACACTaGGTTCGGGACAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: FLSPDAVNLISSCNLGVPKYLPH*VRDRGG
Trigger: GCCTCCCCTGTCCCGAACGCAGTGTGGAAGGTACTT...TGGAACACCAAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGGTGACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR CCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGACTTCAAACCCATTCCTaGAGGCCGCCATCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRLQTHS*RPPSSR
Trigger: GCGGGAAGATGGCGGCCTCCAGGAATGGGTTTGAAG...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR GCA 90 bp CCTGTAAAAATGCTCTGCATACTTCAAGGGCAGTCTTTCCATCAAAGAAATGATCCCTGCGCTGCCCTCTaGCTCCACGGCTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: PVKMLCILQGQSFHQRNDPCAAL*LHGFKP
Trigger: GGGTTTGAAGCCGTGGAGGCAGAGGGCAGCGCAGGG...ATCATTTCTTTGATGGAAAGACTGCCCTTGAAGTATGCAGAGCATTTTTACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR GCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCAAGTGAGCTGAGGTTGTaGCATTGCACTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSSELRL*HCTLAW
Trigger: CCAGGCTAGAGTGCAATGGCACAACCTCAGCTCACT...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCATTACAAACAGAAGAGTaGGTCCGTGAGGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSLQTEE*VREGTA
Trigger: CGCTGTGCCCTCACGGACCCACTCTTCTGTTTGTAA...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp TTGTTGGGCGGAATGTTGGTGAAAATACGCACGGGAGACTGTTTTCGACCTGTCCACACAGTACTCTTCTaGATCCGAGGGCAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: LLGGMLVKIRTGDCFRPVHTVLF*IRGQKV
Trigger: TACTTTCTGCCCTCGGATTCAGAAGAGTACTGTGTG...GACAGGTCGAAAACAGTCTCCCGTGCGTATTTTCACCAACATTCCGCCCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR TCA 90 bp ATGGTTCCATTTCCTGCCATCCTTGGATGTGCAAGAATTACAGAGCTCACAGTGTGGGCGGAATGTTGGTaGAAATACGCACGGGAGACT +
Preference number: 4 (lower is better)
Translates to: MVPFPAILGCARITELTVWAECW*KYARET
Trigger: AGTCTCCCGTGCGTATTTTCACCAACATTCCGCCCA...CACTGTGAGCTCTGTAATTCTTGCACATCCAAGGATGGCAGGAAATGGAACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR TCA 90 bp TTGTTGGGCGGAATGTTGGTGAAAATACGCACGGGAGACTGTTTTCGACCTGTCGGTATCCCCATACTCTaGGTTGTAATCCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLGGMLVKIRTGDCFRPVGIPIL*VVIHSS
Trigger: GGAGCTATGGATTACAACTCAGAGTATGGGGATACC...GACAGGTCGAAAACAGTCTCCCGTGCGTATTTTCACCAACATTCCGCCCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp CTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTTTCCTGTACCTTTCCACACACTaGGTTCGGGACAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLWNYLLFNLKCLLQPFLYLSTH*VRDRGG
Trigger: GCCTCCCCTGTCCCGAACGCAGTGTGTGGAAAGGTA...CAGGAAAGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGACTGAGGTTGTGCCATTaGACTCTAGCCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRLRLCH*TLAWET
Trigger: TGTCTCCCAGGCTAGAGTGCAATGGCACAACCTCAG...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR TCA 90 bp GCCTTTCCTGCCATCATGTGTCTATATCTGATCTGTCCCTCAAAGCCTGACGTATCTATCTCTACAGGCTaGACAGGCATAAAACCTCCG +
Preference number: 4 (lower is better)
Translates to: AFPAIMCLYLICPSKPDVSISTG*TGIKPP
Trigger: CGGAGGTTTTATGCCTGTTCAGCCTGTAGAGATAGA...TACGTCAGGCTTTGAGGGACAGATCAGATATAGACACATGATGGCAGGAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR TCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGAACATTACCCAGAACCTaGTGCTCACTATGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRTLPRT*CSLCCP
Trigger: GGGGCAACATAGTGAGCATCAGGTTCTGGGTAATGT...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR TCA 90 bp TTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCTCCACATTACCCAGAACCTaGTGCTCACTATGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: FSSHWTFKSQDIDGLFPSTLPRT*CSLCCP
Trigger: GGGGCAACATAGTGAGCATCAGGTTCTGGGTAATGT...GGAGGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR TCA 90 bp TTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCTCCTCTGGAACAGCACAGTaGTTGCAGATGCTACAGTGG +
Preference number: 4 (lower is better)
Translates to: FSSHWTFKSQDIDGLFPSSGTAQ*LQMLQW
Trigger: CCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGA...GGAGGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR GCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCAGAACAGCACAGTGATTaGAGATGCTACAGTGGATCC +
Preference number: 4 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSEQHSD*RCYSGS
Trigger: GGATCCACTGTAGCATCTGCAATCACTGTGCTGTTC...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CCA 90 bp AAGCATGAACTGTCACCCCCTATAACTTTACACATGAGACGTAAAGCCAAGGAGTTACAAACAGAAGAGTaGGTCCGTGAGGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: KHELSPPITLHMRRKAKELQTEE*VREGTA
Trigger: CGCTGTGCCCTCACGGACCCACTCTTCTGTTTGTAA...CTCCTTGGCTTTACGTCTCATGTGTAAAGTTATAGGGGGTGACAGTTCATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCACTGGGCCTTCTTAACTaGGTAATGGACACATTACCC +
Preference number: 4 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSLGLLN*VMDTLP
Trigger: GGGTAATGTGTCCATTACCCAGTTAAGAAGGCCCAG...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CCA 90 bp AAAGCAGCCATGTTTGGGGCCCTCACAAGAATGATCTGGAACAGCACAGTGATTCTGGGCCTTCTTAACTaGGTAATGGACACATTACCC +
Preference number: 4 (lower is better)
Translates to: KAAMFGALTRMIWNSTVILGLLN*VMDTLP
Trigger: GGGTAATGTGTCCATTACCCAGTTAAGAAGGCCCAG...AATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCCCCAAACATGGCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp AAGCCACCAAACGGAGGATCCGTCACCATAATGATTCCTTCGCCTTTATCTTCCCAGCTCATGCAACCTTaGTGTTCCAACACACAGTAC +
Preference number: 4 (lower is better)
Translates to: KPPNGGSVTIMIPSPLSSQLMQP*CSNTQY
Trigger: GTACTGTGTGTTGGAACACCAAGGTTGCATGAGCTG...GGAAGATAAAGGCGAAGGAATCATTATGGTGACGGATCCTCCGTTTGGTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR TCA 90 bp CAGAAAGTAAGTCTACCAAGAACTGACAGCTCCGATCAGCAAACAGATACTGGGCACACAGTACTCTTCTaGATCCGAGGGCAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: QKVSLPRTDSSDQQTDTGHTVLF*IRGQKV
Trigger: TACTTTCTGCCCTCGGATTCAGAAGAGTACTGTGTG...CCCAGTATCTGTTTGCTGATCGGAGCTGTCAGTTCTTGGTAGACTTACTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR TCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCAAGACTTCTTGTCACCTaGTGCTGTCAACTTGATCAG +
Preference number: 4 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSRLLVT*CCQLDQ
Trigger: CTGATCAAGTTGACAGCATCAGGTGACAAGAAGTCT...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR TCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCACTGTCATCTTGGCTTTaGCCTTCTTTCCACATAGCA +
Preference number: 4 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSLSSWL*PSFHIA
Trigger: TGCTATGTGGAAAGAAGGTCAAAGCCAAGATGACAG...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR TCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCAAGAGAAACATACCGTTaGCACGGAGAGCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSRETYR*HGEQNL
Trigger: CAGATTTTGCTCTCCGTGTCAACGGTATGTTTCTCT...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR TCA 90 bp AGCTCCGATCAGCAAACAGATACTGGGCATTTGTCTTCTTGTTTTCCAGTGGATACACATACCCAGAACTaGTGCTCACTATGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: SSDQQTDTGHLSSCFPVDTHTQN*CSLCCP
Trigger: GGGGCAACATAGTGAGCATCAGTTCTGGGTATGTGT...ATCCACTGGAAAACAAGAAGACAAATGCCCAGTATCTGTTTGCTGATCGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR GCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCAAATGGTTCCATTTCCTaGCATCCTTGGATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSNGSIS*HPWMCK
Trigger: CTTGCACATCCAAGGATGGCAGGAAATGGAACCATT...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR GCA 90 bp AAAGCAGCCATGTTTGGGGCCCTCACAAGAATGATCTGGAACAGCACAGTGATTAATGGTTCCATTTCCTaGCATCCTTGGATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KAAMFGALTRMIWNSTVINGSIS*HPWMCK
Trigger: CTTGCACATCCAAGGATGGCAGGAAATGGAACCATT...AATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCCCCAAACATGGCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp TTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCTCCCACAGTGATTGCAGATaGTACAGTGGATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FSSHWTFKSQDIDGLFPSHSDCR*YSGSRK
Trigger: CTTCCTGGATCCACTGTAGCATCTGCAATCACTGTG...GGAGGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR GCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGACCAGCAAATGCCACCTaGCTGTTATCTAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRPANAT*LLSSSE
Trigger: TTCTGAGCTAGATAACAGGCAGGTGGCATTTGCTGG...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGACAGCTCATGCAACCTTaGTGTTCCAACACACAGTAC +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRQLMQP*CSNTQY
Trigger: GTACTGTGTGTTGGAACACCAAGGTTGCATGAGCTG...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR TCA 90 bp TGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCATCTATCTCTACAGGCTaGACAGGCATAAAACCTCCG +
Preference number: 4 (lower is better)
Translates to: CYLAQKGAHLWKQLNLSPSISTG*TGIKPP
Trigger: CGGAGGTTTTATGCCTGTTCAGCCTGTAGAGATAGA...TGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp AAGCATGAACTGTCACCCCCTATAACTTTACACATGAGACGTAAAGCCAAGGAGCTGATGCTGTCAACTTaGTCAGCTCATGCAACCTTG +
Preference number: 4 (lower is better)
Translates to: KHELSPPITLHMRRKAKELMLST*SAHATL
Trigger: CAAGGTTGCATGAGCTGATCAAGTTGACAGCATCAG...CTCCTTGGCTTTACGTCTCATGTGTAAAGTTATAGGGGGTGACAGTTCATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR TCA 90 bp ATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGATCATACAGTCTGGAACAGCACAGTaGTTGCAGATGCTACAGTGG +
Preference number: 4 (lower is better)
Translates to: IIMKKPGLLESDLAKIIQSGTAQ*LQMLQW
Trigger: CCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGA...CTGTATGATCTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp CCTGATGCTGTCAACTTGATCAGCTCATGCAACCTTGGTGTTCCAACACACAGTTATACACCTTGGCTTTaGCCTTCTTTCCACATAGCA +
Preference number: 4 (lower is better)
Translates to: PDAVNLISSCNLGVPTHSYTPWL*PSFHIA
Trigger: TGCTATGTGGAAAGAAGGTCAAAGCCAAGGTGTATA...ACTGTGTGTTGGAACACCAAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR GCA 90 bp CCTGATGCTGTCAACTTGATCAGCTCATGCAACCTTGGTGTTCCAACACACAGTAACTTGATCAGCTCATaGAACCTTGGTGTTCCAACA +
Preference number: 4 (lower is better)
Translates to: PDAVNLISSCNLGVPTHSNLISS*NLGVPT
Trigger: TGTTGGAACACCAAGGTTGCATGAGCTGATCAAGTT...ACTGTGTGTTGGAACACCAAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR GCA 90 bp GAAAATACGCACGGGAGACTGTTTTCGACCTGTCTTTCCGTGTTTATAAAGTGCCACAGTGATTGCAGATaGTACAGTGGATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ENTHGRLFSTCLSVFIKCHSDCR*YSGSRK
Trigger: CTTCCTGGATCCACTGTAGCATCTGCAATCACTGTG...GCACTTTATAAACACGGAAAGACAGGTCGAAAACAGTCTCCCGTGCGTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp TGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGAACAGCACAGTGATTaGAGATGCTACAGTGGATCC +
Preference number: 4 (lower is better)
Translates to: CYLAQKGAHLWKQLNLSPEQHSD*RCYSGS
Trigger: GGATCCACTGTAGCATCTGCAATCACTGTGCTGTTC...TGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR GCA 90 bp ATGGTTCCATTTCCTGCCATCCTTGGATGTGCAAGAATTACAGAGCTCACAGTGCCCTCCATCCATCTATaGAGCCAGTACTTAATAGTG +
Preference number: 4 (lower is better)
Translates to: MVPFPAILGCARITELTVPSIHL*SQYLIV
Trigger: CACTATTAAGTACTGGCTGCATAGATGGATGGAGGG...CACTGTGAGCTCTGTAATTCTTGCACATCCAAGGATGGCAGGAAATGGAACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp GCCTTTCCTGCCATCATGTGTCTATATCTGATCTGTCCCTCAAAGCCTGACGTACTCACAAGAATGATCTaGAACAGCACAGTGATTGCA +
Preference number: 4 (lower is better)
Translates to: AFPAIMCLYLICPSKPDVLTRMI*NSTVIA
Trigger: TGCAATCACTGTGCTGTTCCAGATCATTCTTGTGAG...TACGTCAGGCTTTGAGGGACAGATCAGATATAGACACATGATGGCAGGAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp GTGACCTGGCCAAGATCATACAGCCAGGAAATATTAAGGGTAGGAATGAGGAGTATTAGCCAGTCGTGGTaGCATGTGCCTATAATTCCA +
Preference number: 4 (lower is better)
Translates to: VTWPRSYSQEILRVGMRSISQSW*HVPIIP
Trigger: TGGAATTATAGGCACATGCCACCACGACTGGCTAAT...ACTCCTCATTCCTACCCTTAATATTTCCTGGCTGTATGATCTTGGCCAGGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp GTTGGTGAAAATACGCACGGGAGACTGTTTTCGACCTGTCTTTCCGTGTTTATAAGCAAGTCTAGCTCCTaGCAACTTTTCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VGENTHGRLFSTCLSVFISKSSS*QLFIFP
Trigger: TGGGAAGATGAAAAGTTGTCAGGAGCTAGACTTGCT...TATAAACACGGAAAGACAGGTCGAAAACAGTCTCCCGTGCGTATTTTCACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR TCA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCCACACAGTACTCTTCTaGATCCGAGGGCAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPHTVLF*IRGQKV
Trigger: TACTTTCTGCCCTCGGATTCAGAAGAGTACTGTGTG...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR TCA 90 bp TGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAAGACTTCTTGTCACCTaGTGCTGTCAACTTGATCAG +
Preference number: 4 (lower is better)
Translates to: CYLAQKGAHLWKQLNLSPRLLVT*CCQLDQ
Trigger: CTGATCAAGTTGACAGCATCAGGTGACAAGAAGTCT...TGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR TCA 90 bp AAGCATGAACTGTCACCCCCTATAACTTTACACATGAGACGTAAAGCCAAGGAGAGACTTCTTGTCACCTaGTGCTGTCAACTTGATCAG +
Preference number: 4 (lower is better)
Translates to: KHELSPPITLHMRRKAKERLLVT*CCQLDQ
Trigger: CTGATCAAGTTGACAGCATCAGGTGACAAGAAGTCT...CTCCTTGGCTTTACGTCTCATGTGTAAAGTTATAGGGGGTGACAGTTCATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR TCA 90 bp TGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCACTGTCATCTTGGCTTTaGCCTTCTTTCCACATAGCA +
Preference number: 4 (lower is better)
Translates to: CYLAQKGAHLWKQLNLSPLSSWL*PSFHIA
Trigger: TGCTATGTGGAAAGAAGGTCAAAGCCAAGATGACAG...TGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR TCA 90 bp TTCTTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTTGGGCGGAATGTTGGTaGAAATACGCACGGGAGACT +
Preference number: 4 (lower is better)
Translates to: FLFSSHWTFKSQDIDGLFWAECW*KYARET
Trigger: AGTCTCCCGTGCGTATTTTCACCAACATTCCGCCCA...AAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR TCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCAGGGAGAGACTTAAAGTaGGGAAAAATGAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSGRDLK*GKMNAE
Trigger: TTCAGCATTCATTTTTCCTCACTTTAAGTCTCTCCC...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR TCA 90 bp TTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCTCCTTTGCTTCTGCTTTCTaGCAGCTAAGAATGATCTGG +
Preference number: 4 (lower is better)
Translates to: FSSHWTFKSQDIDGLFPSFASAF*QLRMIW
Trigger: CCAGATCATTCTTAGCTGTCAGAAAGCAGAAGCAAA...GGAGGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR GCA 90 bp TTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCTCCAACTTGATCAGCTCATaGAACCTTGGTGTTCCAACA +
Preference number: 4 (lower is better)
Translates to: FSSHWTFKSQDIDGLFPSNLISS*NLGVPT
Trigger: TGTTGGAACACCAAGGTTGCATGAGCTGATCAAGTT...GGAGGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CCA 90 bp ACACAGATGGAATACATTTTTCTAGTAAAGTATTCGACTGACTTGTTAGCTCTCCTTCAAACCCATTCCTaGAGGCCGCCATCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: TQMEYIFLVKYSTDLLALLQTHS*RPPSSR
Trigger: GCGGGAAGATGGCGGCCTCCAGGAATGGGTTTGAAG...GAGAGCTAACAAGTCAGTCGAATACTTTACTAGAAAAATGTATTCCATCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCCAGCTCATGCAACCTTaGTGTTCCAACACACAGTAC +
Preference number: 4 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPQLMQP*CSNTQY
Trigger: GTACTGTGTGTTGGAACACCAAGGTTGCATGAGCTG...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CCA 90 bp CTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTTTCCTGCAGCTCATGCAACCTTaGTGTTCCAACACACAGTAC +
Preference number: 4 (lower is better)
Translates to: LLWNYLLFNLKCLLQPFLQLMQP*CSNTQY
Trigger: GTACTGTGTGTTGGAACACCAAGGTTGCATGAGCTG...CAGGAAAGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR CAA 72 bp AATCTGTACCCTTCTTCAGTAGGAAGGATTATTTTGTaGGGCGGAATGTTGGTGAAAATACGCACGGGAGAC +
Preference number: 4 (lower is better)
Translates to: NLYPSSVGRIIL*GGMLVKIRTGD
Trigger: GTCTCCCGTGCGTATTTTCACCAACATTCCGCCCAACAAAATAATCCTTCCTACTGAAGAAGGGTACAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR CAA 72 bp ACTGACAGCTCCGATCAGCAAACAGATACTGGGCATTaGTCTTCTTGTTTTCCAGTGGATAAAGGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: TDSSDQQTDTGH*SSCFPVDKGVD
Trigger: GTCAACTCCTTTATCCACTGGAAAACAAGAAGACAAATGCCCAGTATCTGTTTGCTGATCGGAGCTGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR TCA 90 bp AACGGAGGATCCGTCACCATAATGATTCCTTCGCCTTTATCTTCCTGTAAAAATCTGATGCTGTCAACTTaGTCAGCTCATGCAACCTTG +
Preference number: 4 (lower is better)
Translates to: NGGSVTIMIPSPLSSCKNLMLST*SAHATL
Trigger: CAAGGTTGCATGAGCTGATCAAGTTGACAGCATCAG...ATTTTTACAGGAAGATAAAGGCGAAGGAATCATTATGGTGACGGATCCTCCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR TCA 90 bp AATTACCAAACTATCCTGGCTTCTGCTACGAACTACTTTTACAAAGACAGAATCTGGGCGGAATGTTGGTaGAAATACGCACGGGAGACT +
Preference number: 4 (lower is better)
Translates to: NYQTILASATNYFYKDRIWAECW*KYARET
Trigger: AGTCTCCCGTGCGTATTTTCACCAACATTCCGCCCA...GATTCTGTCTTTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp TGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCACAGAGCTCACAGTGTTaGTTCTCTAGAGAAACATAC +
Preference number: 4 (lower is better)
Translates to: CYLAQKGAHLWKQLNLSPQSSQC*FSRETY
Trigger: GTATGTTTCTCTAGAGAATCAACACTGTGAGCTCTG...TGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR TCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGACAAGTACTGCGTTTATaGTCCAGTTCACCACAAATA +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRQVLRL*SSSPQI
Trigger: TATTTGTGGTGAACTGGATCATAAACGCAGTACTTG...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGACTTGTAGCAGATGTATaGTTCATGGATTGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRLVADV*FMDCPF
Trigger: GAAAGGACAATCCATGAATCATACATCTGCTACAAG...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR TCA 90 bp GAAAATACGCACGGGAGACTGTTTTCGACCTGTCTTTCCGTGTTTATAAAGTGCACTTGCTATTCAATCTaGAATGCCTTCTCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ENTHGRLFSTCLSVFIKCTCYSI*NAFSSL
Trigger: AAGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGT...GCACTTTATAAACACGGAAAGACAGGTCGAAAACAGTCTCCCGTGCGTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp TTCTTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTTCTAGCTCAGAAAGGTaGACACCTCTGGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FLFSSHWTFKSQDIDGLFSSSER*TPLEAA
Trigger: AGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGA...AAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR GCA 90 bp AATTACCAAACTATCCTGGCTTCTGCTACGAACTACTTTTACAAAGACAGAATCCTGAGGTTGTGCCATTaGACTCTAGCCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: NYQTILASATNYFYKDRILRLCH*TLAWET
Trigger: TGTCTCCCAGGCTAGAGTGCAATGGCACAACCTCAG...GATTCTGTCTTTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR GCA 90 bp AAGCATGAACTGTCACCCCCTATAACTTTACACATGAGACGTAAAGCCAAGGAGTTCTCCAGCCTTTCCTaGCATCATGTGTCTATATCT +
Preference number: 4 (lower is better)
Translates to: KHELSPPITLHMRRKAKEFSSLS*HHVSIS
Trigger: AGATATAGACACATGATGGCAGGAAAGGCTGGAGAA...CTCCTTGGCTTTACGTCTCATGTGTAAAGTTATAGGGGGTGACAGTTCATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp AAGCATGAACTGTCACCCCCTATAACTTTACACATGAGACGTAAAGCCAAGGAGCTATTCAATCTGAAATaGCTTCTCCAGCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: KHELSPPITLHMRRKAKELFNLK*LLQPFL
Trigger: CAGGAAAGGCTGGAGAAGGCATTTCAGATTGAATAG...CTCCTTGGCTTTACGTCTCATGTGTAAAGTTATAGGGGGTGACAGTTCATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGAATTTCCTGCCATCCTTaGATGTGCAAGAATTACAGA +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRISCHP*MCKNYR
Trigger: TCTGTAATTCTTGCACATCCAAGGATGGCAGGAAAT...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CCA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCATTATTCTCCAGTCACTaGACATTTAAGAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSLFSSH*TFKSQD
Trigger: ATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGAATTACCAAACTATCCTaGCTTCTGCTACGAACTACT +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRITKLS*LLLRTT
Trigger: AGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAAT...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CCA 90 bp TGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCACAGCTAAGAATGATCTaGAACAGCACAGTGATTGCA +
Preference number: 4 (lower is better)
Translates to: CYLAQKGAHLWKQLNLSPQLRMI*NSTVIA
Trigger: TGCAATCACTGTGCTGTTCCAGATCATTCTTAGCTG...TGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
3UTR CAA 72 bp TTAATGTTAGACTTCTTGTCACCTGATGCTGTCAACTaGATCAGCTCATGCAACCTTGGTGTTCCAACACAC +
Preference number: 4 (lower is better)
Translates to: LMLDFLSPDAVN*ISSCNLGVPTH
Trigger: GTGTGTTGGAACACCAAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGGTGACAAGAAGTCTAACATTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR TCA 90 bp AAGCATTTAAGTGATTCTAGACCGTCAGAGGACAACTGCAAAAAGTACTTGAAGCACACAGTACTCTTCTaGATCCGAGGGCAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: KHLSDSRPSEDNCKKYLKHTVLF*IRGQKV
Trigger: TACTTTCTGCCCTCGGATTCAGAAGAGTACTGTGTG...CTTCAAGTACTTTTTGCAGTTGTCCTCTGACGGTCTAGAATCACTTAAATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp TTCTTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCTGATGCTGTCAACTTaGTCAGCTCATGCAACCTTG +
Preference number: 4 (lower is better)
Translates to: FLFSSHWTFKSQDIDGLFLMLST*SAHATL
Trigger: CAAGGTTGCATGAGCTGATCAAGTTGACAGCATCAG...AAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR TCA 90 bp AACGGAGGATCCGTCACCATAATGATTCCTTCGCCTTTATCTTCCTGTAAAAATAGACTTCTTGTCACCTaGTGCTGTCAACTTGATCAG +
Preference number: 4 (lower is better)
Translates to: NGGSVTIMIPSPLSSCKNRLLVT*CCQLDQ
Trigger: CTGATCAAGTTGACAGCATCAGGTGACAAGAAGTCT...ATTTTTACAGGAAGATAAAGGCGAAGGAATCATTATGGTGACGGATCCTCCGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR TCA 90 bp GTTGGTGAAAATACGCACGGGAGACTGTTTTCGACCTGTCTTTCCGTGTTTATACAAGTACTGCGTTTATaGTCCAGTTCACCACAAATA +
Preference number: 4 (lower is better)
Translates to: VGENTHGRLFSTCLSVFIQVLRL*SSSPQI
Trigger: TATTTGTGGTGAACTGGATCATAAACGCAGTACTTG...TATAAACACGGAAAGACAGGTCGAAAACAGTCTCCCGTGCGTATTTTCACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR TCA 90 bp CTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTTTCCTGTCCTTCAATAAAGCATaGACTGTCACCCCCTATAAC +
Preference number: 4 (lower is better)
Translates to: LLWNYLLFNLKCLLQPFLSFNKA*TVTPYN
Trigger: GTTATAGGGGGTGACAGTTCATGCTTTATTGAAGGA...CAGGAAAGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp TTCTTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCAGCAAATGCCACCTaGCTGTTATCTAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FLFSSHWTFKSQDIDGLFPANAT*LLSSSE
Trigger: TTCTGAGCTAGATAACAGGCAGGTGGCATTTGCTGG...AAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR GCA 90 bp GTTGGTGAAAATACGCACGGGAGACTGTTTTCGACCTGTCTTTCCGTGTTTATACCTCTGAATGTTGCATaGTTTTGTGGATTATCCTGT +
Preference number: 4 (lower is better)
Translates to: VGENTHGRLFSTCLSVFIPLNVA*FCGLSC
Trigger: ACAGGATAATCCACAAAAGCATGCAACATTCAGAGG...TATAAACACGGAAAGACAGGTCGAAAACAGTCTCCCGTGCGTATTTTCACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp GCTCCGATCAGCAAACAGATACTGGGCATTTGTCTTCTTGTTTTCCAGTGGATAGTTTCTTCTTTCCCTTaGGTCACCTTTACAAACAGA +
Preference number: 4 (lower is better)
Translates to: APISKQILGICLLVFQWIVSSFP*VTFTNR
Trigger: TCTGTTTGTAAAGGTGACCCAAGGGAAAGAAGAAAC...TATCCACTGGAAAACAAGAAGACAAATGCCCAGTATCTGTTTGCTGATCGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR CCA 90 bp TTCTTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCTGGGCCTTCTTAACTaGGTAATGGACACATTACCC +
Preference number: 4 (lower is better)
Translates to: FLFSSHWTFKSQDIDGLFLGLLN*VMDTLP
Trigger: GGGTAATGTGTCCATTACCCAGTTAAGAAGGCCCAG...AAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CCA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGAGGAAAATCCAGAAAATaGGTAGTTCTTTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRGKSRK*VVLCDC
Trigger: ACAGTCACAAAGAACTACCCATTTTCTGGATTTTCC...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CCA 90 bp GTTGGTGAAAATACGCACGGGAGACTGTTTTCGACCTGTCTTTCCGTGTTTATAATTTCCTGCCATCCTTaGATGTGCAAGAATTACAGA +
Preference number: 4 (lower is better)
Translates to: VGENTHGRLFSTCLSVFIISCHP*MCKNYR
Trigger: TCTGTAATTCTTGCACATCCAAGGATGGCAGGAAAT...TATAAACACGGAAAGACAGGTCGAAAACAGTCTCCCGTGCGTATTTTCACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp TGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCACAGATGTATGATTCATaGATTGTCCTTTCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: CYLAQKGAHLWKQLNLSPQMYDS*IVLSWS
Trigger: AGACCACGAAAGGACAATCCATGAATCATACATCTG...TGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CCA 90 bp TTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCTCCAATTTAAGTCCAGTGTaGCACTTTCAGAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: FSSHWTFKSQDIDGLFPSNLSPV*HFQKMA
Trigger: TGCCATTTTCTGAAAGTGCCACACTGGACTTAAATT...GGAGGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CCA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCAAAGGTGCACACCTCTaGAAGCAGCTGAATTTAAGT +
Preference number: 4 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPKGAHL*KQLNLS
Trigger: ACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTT...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR TCA 90 bp AAGCATTTAAGTGATTCTAGACCGTCAGAGGACAACTGCAAAAAGTACTTGAAGAGCAAGTCTAGCTCCTaGCAACTTTTCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KHLSDSRPSEDNCKKYLKSKSSS*QLFIFP
Trigger: TGGGAAGATGAAAAGTTGTCAGGAGCTAGACTTGCT...CTTCAAGTACTTTTTGCAGTTGTCCTCTGACGGTCTAGAATCACTTAAATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp CCTGTAAAAATGCTCTGCATACTTCAAGGGCAGTCTTTCCATCAAAGAAATGATAGCAAGTCTAGCTCCTaGCAACTTTTCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PVKMLCILQGQSFHQRNDSKSSS*QLFIFP
Trigger: TGGGAAGATGAAAAGTTGTCAGGAGCTAGACTTGCT...ATCATTTCTTTGATGGAAAGACTGCCCTTGAAGTATGCAGAGCATTTTTACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR TCA 90 bp ACACAGATGGAATACATTTTTCTAGTAAAGTATTCGACTGACTTGTTAGCTCTCACATTACCCAGAACCTaGTGCTCACTATGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: TQMEYIFLVKYSTDLLALTLPRT*CSLCCP
Trigger: GGGGCAACATAGTGAGCATCAGGTTCTGGGTAATGT...GAGAGCTAACAAGTCAGTCGAATACTTTACTAGAAAAATGTATTCCATCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR TCA 90 bp AATTACCAAACTATCCTGGCTTCTGCTACGAACTACTTTTACAAAGACAGAATCCTGATGCTGTCAACTTaGTCAGCTCATGCAACCTTG +
Preference number: 4 (lower is better)
Translates to: NYQTILASATNYFYKDRILMLST*SAHATL
Trigger: CAAGGTTGCATGAGCTGATCAAGTTGACAGCATCAG...GATTCTGTCTTTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp ACTGACTTGTTAGCTCTCTTAGATGTAGCAATGTTAGGACAAGTACTGCGTTTAAGAGAAACATACCGTTaGCACGGAGAGCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: TDLLALLDVAMLGQVLRLRETYR*HGEQNL
Trigger: CAGATTTTGCTCTCCGTGTCAACGGTATGTTTCTCT...TAAACGCAGTACTTGTCCTAACATTGCTACATCTAAGAGAGCTAACAAGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR TCA 90 bp ACACAGATGGAATACATTTTTCTAGTAAAGTATTCGACTGACTTGTTAGCTCTCTCTGGAACAGCACAGTaGTTGCAGATGCTACAGTGG +
Preference number: 4 (lower is better)
Translates to: TQMEYIFLVKYSTDLLALSGTAQ*LQMLQW
Trigger: CCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGA...GAGAGCTAACAAGTCAGTCGAATACTTTACTAGAAAAATGTATTCCATCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR TCA 90 bp ATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGATCATACAGCTTGTAGCAGATGTATaGTTCATGGATTGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: IIMKKPGLLESDLAKIIQLVADV*FMDCPF
Trigger: GAAAGGACAATCCATGAATCATACATCTGCTACAAG...CTGTATGATCTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCGGGAGAGACTTAAAGTaGGGAAAAATGAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPGRDLK*GKMNAE
Trigger: TTCAGCATTCATTTTTCCTCACTTTAAGTCTCTCCC...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR TCA 90 bp GTTGGTGAAAATACGCACGGGAGACTGTTTTCGACCTGTCTTTCCGTGTTTATAAGTAAAGTATTCGACTaGCTTGTTAGCTCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: VGENTHGRLFSTCLSVFISKVFD*LVSSLR
Trigger: TCTAAGAGAGCTAACAAGTCAGTCGAATACTTTACT...TATAAACACGGAAAGACAGGTCGAAAACAGTCTCCCGTGCGTATTTTCACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp AAGCATTTAAGTGATTCTAGACCGTCAGAGGACAACTGCAAAAAGTACTTGAAGAATGGTTCCATTTCCTaGCATCCTTGGATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KHLSDSRPSEDNCKKYLKNGSIS*HPWMCK
Trigger: CTTGCACATCCAAGGATGGCAGGAAATGGAACCATT...CTTCAAGTACTTTTTGCAGTTGTCCTCTGACGGTCTAGAATCACTTAAATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR GCA 90 bp AATTACCAAACTATCCTGGCTTCTGCTACGAACTACTTTTACAAAGACAGAATCCACAGTGATTGCAGATaGTACAGTGGATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: NYQTILASATNYFYKDRIHSDCR*YSGSRK
Trigger: CTTCCTGGATCCACTGTAGCATCTGCAATCACTGTG...GATTCTGTCTTTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR GCA 90 bp GTTGGTGAAAATACGCACGGGAGACTGTTTTCGACCTGTCTTTCCGTGTTTATAAGATCCTCTGAATGTTaGATGCTTTTGTGGATTATC +
Preference number: 4 (lower is better)
Translates to: VGENTHGRLFSTCLSVFIRSSEC*MLLWII
Trigger: GATAATCCACAAAAGCATGCAACATTCAGAGGATCT...TATAAACACGGAAAGACAGGTCGAAAACAGTCTCCCGTGCGTATTTTCACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp ATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGATCATACAGGTTTCTTCTTTCCCTTaGGTCACCTTTACAAACAGA +
Preference number: 4 (lower is better)
Translates to: IIMKKPGLLESDLAKIIQVSSFP*VTFTNR
Trigger: TCTGTTTGTAAAGGTGACCCAAGGGAAAGAAGAAAC...CTGTATGATCTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CCA 90 bp CTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTTTCCTGGTTTCTTCTTTCCCTTaGGTCACCTTTACAAACAGA +
Preference number: 4 (lower is better)
Translates to: LLWNYLLFNLKCLLQPFLVSSFP*VTFTNR
Trigger: TCTGTTTGTAAAGGTGACCCAAGGGAAAGAAGAAAC...CAGGAAAGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp TGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGGAAAATCCAGAAAATaGGTAGTTCTTTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: CYLAQKGAHLWKQLNLSPGKSRK*VVLCDC
Trigger: ACAGTCACAAAGAACTACCCATTTTCTGGATTTTCC...TGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CCA 90 bp ATAATAATGATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGTTGCAGATGCTACAGTaGATCCAGGAAGGCTTTACA +
Preference number: 4 (lower is better)
Translates to: IIMIIMKKPGLLESDLAKLQMLQ*IQEGFT
Trigger: TGTAAAGCCTTCCTGGATCCACTGTAGCATCTGCAA...CTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTATCATTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CCA 90 bp TTCTTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTTTGCAGATGCTACAGTaGATCCAGGAAGGCTTTACA +
Preference number: 4 (lower is better)
Translates to: FLFSSHWTFKSQDIDGLFLQMLQ*IQEGFT
Trigger: TGTAAAGCCTTCCTGGATCCACTGTAGCATCTGCAA...AAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CCA 90 bp ATTTTCCTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTTTGCAGATGCTACAGTaGATCCAGGAAGGCTTTACA +
Preference number: 4 (lower is better)
Translates to: IFLLWNYLLFNLKCLLQPLQMLQ*IQEGFT
Trigger: TGTAAAGCCTTCCTGGATCCACTGTAGCATCTGCAA...AGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp ATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGATCATACAGCAGATGTATGATTCATaGATTGTCCTTTCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: IIMKKPGLLESDLAKIIQQMYDS*IVLSWS
Trigger: AGACCACGAAAGGACAATCCATGAATCATACATCTG...CTGTATGATCTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CCA 90 bp TTCTTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTATTAGCCAGTCGTGGTaGCATGTGCCTATAATTCCA +
Preference number: 4 (lower is better)
Translates to: FLFSSHWTFKSQDIDGLFISQSW*HVPIIP
Trigger: TGGAATTATAGGCACATGCCACCACGACTGGCTAAT...AAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR TCA 90 bp AATTACCAAACTATCCTGGCTTCTGCTACGAACTACTTTTACAAAGACAGAATCAGAGAAACATACCGTTaGCACGGAGAGCAAAATCTG +
Preference number: 4 (lower is better)
Translates to: NYQTILASATNYFYKDRIRETYR*HGEQNL
Trigger: CAGATTTTGCTCTCCGTGTCAACGGTATGTTTCTCT...GATTCTGTCTTTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR TCA 90 bp AAGCATTTAAGTGATTCTAGACCGTCAGAGGACAACTGCAAAAAGTACTTGAAGCAGAGCTCACAGTGTTaGTTCTCTAGAGAAACATAC +
Preference number: 4 (lower is better)
Translates to: KHLSDSRPSEDNCKKYLKQSSQC*FSRETY
Trigger: GTATGTTTCTCTAGAGAATCAACACTGTGAGCTCTG...CTTCAAGTACTTTTTGCAGTTGTCCTCTGACGGTCTAGAATCACTTAAATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR GCA 90 bp AAGCATTTAAGTGATTCTAGACCGTCAGAGGACAACTGCAAAAAGTACTTGAAGAACTTGATCAGCTCATaGAACCTTGGTGTTCCAACA +
Preference number: 4 (lower is better)
Translates to: KHLSDSRPSEDNCKKYLKNLISS*NLGVPT
Trigger: TGTTGGAACACCAAGGTTGCATGAGCTGATCAAGTT...CTTCAAGTACTTTTTGCAGTTGTCCTCTGACGGTCTAGAATCACTTAAATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR GCA 90 bp ATTTTCCTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTAACTTGATCAGCTCATaGAACCTTGGTGTTCCAACA +
Preference number: 4 (lower is better)
Translates to: IFLLWNYLLFNLKCLLQPNLISS*NLGVPT
Trigger: TGTTGGAACACCAAGGTTGCATGAGCTGATCAAGTT...AGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR GCA 90 bp ACACAGATGGAATACATTTTTCTAGTAAAGTATTCGACTGACTTGTTAGCTCTCGAACAGCACAGTGATTaGAGATGCTACAGTGGATCC +
Preference number: 4 (lower is better)
Translates to: TQMEYIFLVKYSTDLLALEQHSD*RCYSGS
Trigger: GGATCCACTGTAGCATCTGCAATCACTGTGCTGTTC...GAGAGCTAACAAGTCAGTCGAATACTTTACTAGAAAAATGTATTCCATCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CCA 90 bp ATAATAATGATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGGGCACTTTCAGAAAATaGCATCAAAGGTTGGACCAT +
Preference number: 4 (lower is better)
Translates to: IIMIIMKKPGLLESDLAKGTFRK*HQRLDH
Trigger: ATGGTCCAACCTTTGATGCCATTTTCTGAAAGTGCC...CTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTATCATTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CCA 90 bp TTCTTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTGGCACTTTCAGAAAATaGCATCAAAGGTTGGACCAT +
Preference number: 4 (lower is better)
Translates to: FLFSSHWTFKSQDIDGLFGTFRK*HQRLDH
Trigger: ATGGTCCAACCTTTGATGCCATTTTCTGAAAGTGCC...AAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CCA 90 bp AAGCATTTAAGTGATTCTAGACCGTCAGAGGACAACTGCAAAAAGTACTTGAAGAAAGGTGCACACCTCTaGAAGCAGCTGAATTTAAGT +
Preference number: 4 (lower is better)
Translates to: KHLSDSRPSEDNCKKYLKKGAHL*KQLNLS
Trigger: ACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTT...CTTCAAGTACTTTTTGCAGTTGTCCTCTGACGGTCTAGAATCACTTAAATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CCA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCAAAGAACTAGTAAACTaGCTGAAGATGGAACAACTC +
Preference number: 4 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPKELVN*LKMEQL
Trigger: GAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTT...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CCA 90 bp AAGCATTTAAGTGATTCTAGACCGTCAGAGGACAACTGCAAAAAGTACTTGAAGATTTCCTGCCATCCTTaGATGTGCAAGAATTACAGA +
Preference number: 4 (lower is better)
Translates to: KHLSDSRPSEDNCKKYLKISCHP*MCKNYR
Trigger: TCTGTAATTCTTGCACATCCAAGGATGGCAGGAAAT...CTTCAAGTACTTTTTGCAGTTGTCCTCTGACGGTCTAGAATCACTTAAATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CCA 90 bp AATTACCAAACTATCCTGGCTTCTGCTACGAACTACTTTTACAAAGACAGAATCCTCACAAGAATGATCTaGAACAGCACAGTGATTGCA +
Preference number: 4 (lower is better)
Translates to: NYQTILASATNYFYKDRILTRMI*NSTVIA
Trigger: TGCAATCACTGTGCTGTTCCAGATCATTCTTGTGAG...GATTCTGTCTTTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CCA 90 bp CCTGTAAAAATGCTCTGCATACTTCAAGGGCAGTCTTTCCATCAAAGAAATGATGATAAAGGAGTTGACTaGGCCTTCTTAACTGGTAAT +
Preference number: 4 (lower is better)
Translates to: PVKMLCILQGQSFHQRNDDKGVD*AFLTGN
Trigger: ATTACCAGTTAAGAAGGCCCAGTCAACTCCTTTATC...ATCATTTCTTTGATGGAAAGACTGCCCTTGAAGTATGCAGAGCATTTTTACAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR CCA 90 bp ATAATAATGATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGAAAGAACTAGTAAACTaGCTGAAGATGGAACAACTC +
Preference number: 4 (lower is better)
Translates to: IIMIIMKKPGLLESDLAKKELVN*LKMEQL
Trigger: GAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTT...CTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTATCATTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
3UTR CAA 72 bp AATAGCTTTCTCACAATTTTCCTACTGTGGAATTACTaGCTATTCAATCTGAAATGCCTTCTCCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: NSFLTIFLLWNY*LFNLKCLLQPF
Trigger: GAAAGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAGGAAAATTGTGAGAAAGCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
3UTR CAA 72 bp TCAATATCCAATAAAAGGCTTTTAATGTTAGACTTCTaGTCACCTGATGCTGTCAACTTGATCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: SISNKRLLMLDF*SPDAVNLISSC
Trigger: GCATGAGCTGATCAAGTTGACAGCATCAGGTGACAAGAAGTCTAACATTAAAAGCCTTTTATTGGATATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR CCA 90 bp AATTACCAAACTATCCTGGCTTCTGCTACGAACTACTTTTACAAAGACAGAATCAATTTAAGTCCAGTGTaGCACTTTCAGAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: NYQTILASATNYFYKDRINLSPV*HFQKMA
Trigger: TGCCATTTTCTGAAAGTGCCACACTGGACTTAAATT...GATTCTGTCTTTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CCA 90 bp AATTACCAAACTATCCTGGCTTCTGCTACGAACTACTTTTACAAAGACAGAATCATGAGGAGTTTAGTTTaGGCGTTTAATTACCAAACT +
Preference number: 4 (lower is better)
Translates to: NYQTILASATNYFYKDRIMRSLV*AFNYQT
Trigger: AGTTTGGTAATTAAACGCCCAAACTAAACTCCTCAT...GATTCTGTCTTTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CAA 90 bp GTGACCTGGCCAAGATCATACAGCCAGGAAATATTAAGGGTAGGAATGAGGAGTGCTGAGGTTGTGCCATaGCACTCTAGCCTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: VTWPRSYSQEILRVGMRSAEVVP*HSSLGD
Trigger: GTCTCCCAGGCTAGAGTGCAATGGCACAACCTCAGC...ACTCCTCATTCCTACCCTTAATATTTCCTGGCTGTATGATCTTGGCCAGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CAA 90 bp GCTGAAAGAACTAGTAAACTGGCTGAAGATGGAACAACTCCCCATGTCTCCAGAAGGCAGGCAAATCACTaGAGGCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: AERTSKLAEDGTTPHVSRRQANH*RPGVRD
Trigger: GTCTCGAACTCCTGGCCTCAAGTGATTTGCCTGCCT...TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CAA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCATTGTTGGGCGGAATGTaGGTGAAAATACGCACGGGA +
Preference number: 5 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSLLGGM*VKIRTG
Trigger: TCCCGTGCGTATTTTCACCAACATTCCGCCCAACAA...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CAA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCGCTGAGGTTGTGCCATaGCACTCTAGCCTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPAEVVP*HSSLGD
Trigger: GTCTCCCAGGCTAGAGTGCAATGGCACAACCTCAGC...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CAA 90 bp TGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAAGGCAGGCAAATCACTaGAGGCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: CYLAQKGAHLWKQLNLSPRQANH*RPGVRD
Trigger: GTCTCGAACTCCTGGCCTCAAGTGATTTGCCTGCCT...TGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CAA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCACCTGATGCTGTCAACTaGATCAGCTCATGCAACCTT +
Preference number: 5 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSPDAVN*ISSCNL
Trigger: AAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGG...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CAA 90 bp CCTGATGCTGTCAACTTGATCAGCTCATGCAACCTTGGTGTTCCAACACACAGTCCTGATGCTGTCAACTaGATCAGCTCATGCAACCTT +
Preference number: 5 (lower is better)
Translates to: PDAVNLISSCNLGVPTHSPDAVN*ISSCNL
Trigger: AAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGG...ACTGTGTGTTGGAACACCAAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS GCA 90 bp GCAGCCTCATTCTCATTTCAGGCAGGGGGAAAATTCCATAGTCATTaGTGTGAAGTTACTCACTCCAGTAACTTCCTCCCGGAATCAACA +
Preference number: 5 (lower is better)
Translates to: AASFSFQAGGKFHSH*CEVTHSSNFLPEST
Trigger: TGTTGATTCCGGGAGGAAGTTACTGGAGTGAGTAACTTCACAGCAATGACTATGGAATTTTCCCCCTGCCTGAAATGAGAATGAGGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505451.5
CDS-3UTR CAA 90 bp GTGACCTGGCCAAGATCATACAGCCAGGAAATATTAAGGGTAGGAATGAGGAGTTCAGCTCATGCAACCTaGGTGTTCCAACACACAGTA +
Preference number: 5 (lower is better)
Translates to: VTWPRSYSQEILRVGMRSSAHAT*VFQHTV
Trigger: TACTGTGTGTTGGAACACCAAGGTTGCATGAGCTGA...ACTCCTCATTCCTACCCTTAATATTTCCTGGCTGTATGATCTTGGCCAGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CAA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCACATTTCCTGCCATCCTaGGATGTGCAAGAATTACAG +
Preference number: 5 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSHFLPS*DVQELQ
Trigger: CTGTAATTCTTGCACATCCAAGGATGGCAGGAAATG...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CAA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCAAGTTTCTTCTTTCCCTaGGGTCACCTTTACAAACAG +
Preference number: 5 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSSFFFP*GHLYKQ
Trigger: CTGTTTGTAAAGGTGACCCAAGGGAAAGAAGAAACT...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CAA 90 bp TTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCTCCACTGTCATCTTGGCTTaGACCTTCTTTCCACATAGC +
Preference number: 5 (lower is better)
Translates to: FSSHWTFKSQDIDGLFPSTVILA*TFFPHS
Trigger: GCTATGTGGAAAGAAGGTCAAAGCCAAGATGACAGT...GGAGGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CAA 90 bp ATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGATCATACAGTTGTTGGGCGGAATGTaGGTGAAAATACGCACGGGA +
Preference number: 5 (lower is better)
Translates to: IIMKKPGLLESDLAKIIQLLGGM*VKIRTG
Trigger: TCCCGTGCGTATTTTCACCAACATTCCGCCCAACAA...CTGTATGATCTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CAA 90 bp GAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCAGTGTGGCACTTTCAGGAAGGATTATTTTGTaGGGCGGAATGTTGGTGAAA +
Preference number: 5 (lower is better)
Translates to: ERCTPLEAAEFKSSVALSGRIIL*GGMLVK
Trigger: TTTCACCAACATTCCGCCCAACAAAATAATCCTTCC...TGAAAGTGCCACACTGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302874.9
ENST00000505412.1
CDS-3UTR CAA 90 bp AAAGCAGCCATGTTTGGGGCCCTCACAAGAATGATCTGGAACAGCACAGTGATTGGAAGGATTATTTTGTaGGGCGGAATGTTGGTGAAA +
Preference number: 5 (lower is better)
Translates to: KAAMFGALTRMIWNSTVIGRIIL*GGMLVK
Trigger: TTTCACCAACATTCCGCCCAACAAAATAATCCTTCC...AATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCCCCAAACATGGCTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS CCA 90 bp ACTGGGCATTTGTCTTCTTGTTTTCCAGTGGATAAAGGAGTTGACTaGGCCTTCTTAACTGGTAATGACACATACCCAGAACTGATGCTC +
Preference number: 5 (lower is better)
Translates to: TGHLSSCFPVDKGVD*AFLTGNDTYPELML
Trigger: GAGCATCAGTTCTGGGTATGTGTCATTACCAGTTAAGAAGGCCCAGTCAACTCCTTTATCCACTGGAAAACAAGAAGACAAATGCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR CAA 90 bp CAGAAAGTAAGTCTACCAAGAACTGACAGCTCCGATCAGCAAACAGATACTGGGAGTTTCTTCTTTCCCTaGGGTCACCTTTACAAACAG +
Preference number: 5 (lower is better)
Translates to: QKVSLPRTDSSDQQTDTGSFFFP*GHLYKQ
Trigger: CTGTTTGTAAAGGTGACCCAAGGGAAAGAAGAAACT...CCCAGTATCTGTTTGCTGATCGGAGCTGTCAGTTCTTGGTAGACTTACTTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR CAA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCTCAGCTCATGCAACCTaGGTGTTCCAACACACAGTA +
Preference number: 5 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPSAHAT*VFQHTV
Trigger: TACTGTGTGTTGGAACACCAAGGTTGCATGAGCTGA...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CAA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCCCTGATGCTGTCAACTaGATCAGCTCATGCAACCTT +
Preference number: 5 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPPDAVN*ISSCNL
Trigger: AAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGG...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CAA 90 bp AAAGCAGCCATGTTTGGGGCCCTCACAAGAATGATCTGGAACAGCACAGTGATTTTAATGTTAGACTTCTaGTCACCTGATGCTGTCAAC +
Preference number: 5 (lower is better)
Translates to: KAAMFGALTRMIWNSTVILMLDF*SPDAVN
Trigger: GTTGACAGCATCAGGTGACAAGAAGTCTAACATTAA...AATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCCCCAAACATGGCTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CAA 90 bp TTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCTCCTTTGTGACTGTCATCTaGGCTTTGACCTTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: FSSHWTFKSQDIDGLFPSFVTVI*ALTFFP
Trigger: TGGAAAGAAGGTCAAAGCCAAGATGACAGTCACAAA...GGAGGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS GCA 90 bp TTCTGCTTTCTGACAGCTAAGAATGATCTGGAACAGCACAGTGATTaGAGATGCTACAGTGGATCCAGGAAGGCTTTACACACTTTTTAC +
Preference number: 5 (lower is better)
Translates to: FCFLTAKNDLEQHSD*RCYSGSRKALHTFY
Trigger: GTAAAAAGTGTGTAAAGCCTTCCTGGATCCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGATCATTCTTAGCTGTCAGAAAGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CAA 90 bp GTGACCTGGCCAAGATCATACAGCCAGGAAATATTAAGGGTAGGAATGAGGAGTTTAATGTTAGACTTCTaGTCACCTGATGCTGTCAAC +
Preference number: 5 (lower is better)
Translates to: VTWPRSYSQEILRVGMRSLMLDF*SPDAVN
Trigger: GTTGACAGCATCAGGTGACAAGAAGTCTAACATTAA...ACTCCTCATTCCTACCCTTAATATTTCCTGGCTGTATGATCTTGGCCAGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CAA 90 bp TTGATCAGCTCATGCAACCTTGGTGTTCCAACACACAGTACTCTTCTGAATCCGTTAATGTTAGACTTCTaGTCACCTGATGCTGTCAAC +
Preference number: 5 (lower is better)
Translates to: LISSCNLGVPTHSTLLNPLMLDF*SPDAVN
Trigger: GTTGACAGCATCAGGTGACAAGAAGTCTAACATTAA...CGGATTCAGAAGAGTACTGTGTGTTGGAACACCAAGGTTGCATGAGCTGATCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR CAA 90 bp ACTGACTTGTTAGCTCTCTTAGATGTAGCAATGTTAGGACAAGTACTGCGTTTATTGTTGGGCGGAATGTaGGTGAAAATACGCACGGGA +
Preference number: 5 (lower is better)
Translates to: TDLLALLDVAMLGQVLRLLLGGM*VKIRTG
Trigger: TCCCGTGCGTATTTTCACCAACATTCCGCCCAACAA...TAAACGCAGTACTTGTCCTAACATTGCTACATCTAAGAGAGCTAACAAGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CAA 90 bp TTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTCCCGTAGGAAGGATTATTTaGTTGGGCGGAATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LFSSHWTFKSQDIDGLFPVGRII*LGGMLV
Trigger: CACCAACATTCCGCCCAACAAAATAATCCTTCCTAC...GGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CAA 90 bp CTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTTTCCTGCATTTCCTGCCATCCTaGGATGTGCAAGAATTACAG +
Preference number: 5 (lower is better)
Translates to: LLWNYLLFNLKCLLQPFLHFLPS*DVQELQ
Trigger: CTGTAATTCTTGCACATCCAAGGATGGCAGGAAATG...CAGGAAAGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CAA 90 bp AGCTCCGATCAGCAAACAGATACTGGGCATTTGTCTTCTTGTTTTCCAGTGGATTTATACACCTTGGCTTaGACCTTCTTTCCACATAGC +
Preference number: 5 (lower is better)
Translates to: SSDQQTDTGHLSSCFPVDLYTLA*TFFPHS
Trigger: GCTATGTGGAAAGAAGGTCAAAGCCAAGGTGTATAA...ATCCACTGGAAAACAAGAAGACAAATGCCCAGTATCTGTTTGCTGATCGGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612982.1
CDS-3UTR CAA 90 bp ATTTTCCTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTCCTGATGCTGTCAACTaGATCAGCTCATGCAACCTT +
Preference number: 5 (lower is better)
Translates to: IFLLWNYLLFNLKCLLQPPDAVN*ISSCNL
Trigger: AAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGG...AGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CAA 90 bp TGTTATCTAGCTCAGAAAGGTGCACACCTCTGGAAGCAGCTGAATTTAAGTCCATGCTTTCTGACAGCTTaGTTAGCTCTCTTAGATGTA +
Preference number: 5 (lower is better)
Translates to: CYLAQKGAHLWKQLNLSPCFLTA*LALLDV
Trigger: TACATCTAAGAGAGCTAACAAAGCTGTCAGAAAGCA...TGGACTTAAATTCAGCTGCTTCCAGAGGTGTGCACCTTTCTGAGCTAGATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CAA 90 bp ATAATAATGATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGACTGTCATCTTGGCTTaGACCTTCTTTCCACATAGC +
Preference number: 5 (lower is better)
Translates to: IIMIIMKKPGLLESDLAKTVILA*TFFPHS
Trigger: GCTATGTGGAAAGAAGGTCAAAGCCAAGATGACAGT...CTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTATCATTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CAA 90 bp ATAATAATGATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGGTAGGAAGGATTATTTaGTTGGGCGGAATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: IIMIIMKKPGLLESDLAKVGRII*LGGMLV
Trigger: CACCAACATTCCGCCCAACAAAATAATCCTTCCTAC...CTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTATCATTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CAA 90 bp ATAATAATGATAATAATGAAGAAACCGGGGCTTTTAGAGAGTGACCTGGCCAAGCATTTCCTGCCATCCTaGGATGTGCAAGAATTACAG +
Preference number: 5 (lower is better)
Translates to: IIMIIMKKPGLLESDLAKHFLPS*DVQELQ
Trigger: CTGTAATTCTTGCACATCCAAGGATGGCAGGAAATG...CTTGGCCAGGTCACTCTCTAAAAGCCCCGGTTTCTTCATTATTATCATTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CAA 90 bp CTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTTTCCTGAAAGTGACAATTAACTaGGCACTTCAAGATCCTCTG +
Preference number: 5 (lower is better)
Translates to: LLWNYLLFNLKCLLQPFLKVTIN*ALQDPL
Trigger: CAGAGGATCTTGAAGTGCCAAGTTAATTGTCACTTT...CAGGAAAGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CAA 90 bp GAAAATACGCACGGGAGACTGTTTTCGACCTGTCTTTCCGTGTTTATAAAGTGCAGAACTGTAAGCTCTTaGAAAGCAAGCTCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: ENTHGRLFSTCLSVFIKCRTVSS*KASSLN
Trigger: ATTCAAAGAGCTTGCTTTCAAAGAGCTTACAGTTCT...GCACTTTATAAACACGGAAAGACAGGTCGAAAACAGTCTCCCGTGCGTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CAA 90 bp ATTTTCCTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTAGTTTCTTCTTTCCCTaGGGTCACCTTTACAAACAG +
Preference number: 5 (lower is better)
Translates to: IFLLWNYLLFNLKCLLQPSFFFP*GHLYKQ
Trigger: CTGTTTGTAAAGGTGACCCAAGGGAAAGAAGAAACT...AGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CAA 90 bp TTCTTATTCTCCAGTCACTGGACATTTAAGAGCCAAGATATTGATGGGCTCTTTTTAATGTTAGACTTCTaGTCACCTGATGCTGTCAAC +
Preference number: 5 (lower is better)
Translates to: FLFSSHWTFKSQDIDGLFLMLDF*SPDAVN
Trigger: GTTGACAGCATCAGGTGACAAGAAGTCTAACATTAA...AAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGAATAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS-3UTR CAA 90 bp AATTACCAAACTATCCTGGCTTCTGCTACGAACTACTTTTACAAAGACAGAATCTTTGTGACTGTCATCTaGGCTTTGACCTTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: NYQTILASATNYFYKDRIFVTVI*ALTFFP
Trigger: TGGAAAGAAGGTCAAAGCCAAGATGACAGTCACAAA...GATTCTGTCTTTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302874.9
CDS-3UTR CAA 90 bp ACACAGATGGAATACATTTTTCTAGTAAAGTATTCGACTGACTTGTTAGCTCTCGTAGGAAGGATTATTTaGTTGGGCGGAATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: TQMEYIFLVKYSTDLLALVGRII*LGGMLV
Trigger: CACCAACATTCCGCCCAACAAAATAATCCTTCCTAC...GAGAGCTAACAAGTCAGTCGAATACTTTACTAGAAAAATGTATTCCATCTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS-3UTR CAA 90 bp ATTTTCCTACTGTGGAATTACTTGCTATTCAATCTGAAATGCCTTCTCCAGCCTAAGTATTCGACTGACTaGTTAGCTCTCTTAGATGTA +
Preference number: 5 (lower is better)
Translates to: IFLLWNYLLFNLKCLLQPKYSTD*LALLDV
Trigger: TACATCTAAGAGAGCTAACAAGTCAGTCGAATACTT...AGGCTGGAGAAGGCATTTCAGATTGAATAGCAAGTAATTCCACAGTAGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507760.5
CDS TCA 72 bp TCTCTGCCTTCTCTGACACTCCTGACATCCCAAGAGTaGTGCAGTAAAGTGTGCATGGCATTTCACCAACCA +
Preference number: 6 (lower is better)
Translates to: SLPSLTLLTSQE*CSKVCMAFHQP
Trigger: TGGTTGGTGAAATGCCATGCACACTTTACTGCATCACTCTTGGGATGTCAGGAGTGTCAGAGAAGGCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505451.5
CDS TCA 72 bp CTTCTTAACTGGGTAATGGACACATTACCCAGAACCTaGTGCTCACTATGTTGCCCCCAGTCATCTGGTAAC +
Preference number: 6 (lower is better)
Translates to: LLNWVMDTLPRT*CSLCCPQSSGN
Trigger: GTTACCAGATGACTGGGGGCAACATAGTGAGCATCAGGTTCTGGGTAATGTGTCCATTACCCAGTTAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302874.9
ENST00000505451.5
ENST00000507760.5
CDS GCA 72 bp CTGACAGCTAAGAATGATCTGGAACAGCACAGTGATTaGAGATGCTACAGTGGATCCAGGAAGGCTTTACAC +
Preference number: 6 (lower is better)
Translates to: LTAKNDLEQHSD*RCYSGSRKALH
Trigger: GTGTAAAGCCTTCCTGGATCCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGATCATTCTTAGCTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS GCA 72 bp TTCTCATTTCAGGCAGGGGGAAAATTCCATAGTCATTaGTGTGAAGTTACTCACTCCAGTAACTTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: FSFQAGGKFHSH*CEVTHSSNFLP
Trigger: CGGGAGGAAGTTACTGGAGTGAGTAACTTCACAGCAATGACTATGGAATTTTCCCCCTGCCTGAAATGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505451.5
CDS GCA 72 bp GCTAAGAATGATCTGGAACAGCACAGTGATTGCAGATaGTACAGTGGATCCAGGAAGGCTTTACACACTTTT +
Preference number: 6 (lower is better)
Translates to: AKNDLEQHSDCR*YSGSRKALHTF
Trigger: AAAAGTGTGTAAAGCCTTCCTGGATCCACTGTAGCATCTGCAATCACTGTGCTGTTCCAGATCATTCTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505412.1
CDS CCA 72 bp TTGTCTTCTTGTTTTCCAGTGGATAAAGGAGTTGACTaGGCCTTCTTAACTGGTAATGACACATACCCAGAA +
Preference number: 6 (lower is better)
Translates to: LSSCFPVDKGVD*AFLTGNDTYPE
Trigger: TTCTGGGTATGTGTCATTACCAGTTAAGAAGGCCCAGTCAACTCCTTTATCCACTGGAAAACAAGAAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612982.1