Pregenerated sensors for ZCCHC18 (Homo sapiens)
Ensembl gene IDs: ENSG00000166707Ensembl transcript IDs: ENST00000422784.5, ENST00000537356.3, ENST00000650639.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTaGCAATGGTTACAAAAGGGTGCTGAGTTTCAGGTAATTTGTACT | + |
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Preference number: 1 (lower is better) Translates to: YTGTGRYLEGHSPKG*QWLQKGAEFQVICT Trigger: AGTACAAATTACCTGAAACTCAGCACCCTTTTGTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| 3UTR-3UTR CCA 90 bp | GGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACAAAAGGGTGCCCCATCCACTGTGCTaGTATGCAAGACCTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: GDIWKDIHQRADNGYKRVPHPLC*YARPLL Trigger: GAGAAGAGGTCTTGCATACCAGCACAGTGGATGGGG...CACCCTTTTGTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| 3UTR-3UTR GCA 90 bp | CAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACATTCCCCATCCACTGTaGTGGTATGCAAGACCTCTT | + |
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Preference number: 2 (lower is better) Translates to: QVQGDIWKDIHQRADNGYIPHPL*WYARPL Trigger: AAGAGGTCTTGCATACCAGCACAGTGGATGGGGAAT...GTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| 3UTR-3UTR TCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATCCCATTACCAGACTCTaGATACAGTCAAGGACTCAT | + |
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Preference number: 2 (lower is better) Translates to: GTQVQGDIWKDIHQRADNPITRL*IQSRTH Trigger: ATGAGTCCTTGACTGTATTCAGAGTCTGGTAATGGG...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| 3UTR CCA 72 bp | AGGGACAGAGGTCACACCATTCCCCATCCACTGTGCTaGTATGCAAGACCTCTTCTCCTTCCCAAAGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: RDRGHTIPHPLC*YARPLLLPKGK Trigger: TTTTCCTTTGGGAAGGAGAAGAGGTCTTGCATACCAGCACAGTGGATGGGGAATGGTGTGACCTCTGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| 3UTR TCA 72 bp | ACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTaGCAATGGTTACAAAAGGGTGCTGAGTTTCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: TGRYLEGHSPKG*QWLQKGAEFQV Trigger: TACCTGAAACTCAGCACCCTTTTGTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | CAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACCTGGGCGCCCTGAAATaGCACAGGGCTGGCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: QVQGDIWKDIHQRADNGYLGALK*HRAGCP Trigger: AGGGCAGCCAGCCCTGTGGCATTTCAGGGCGCCCAG...GTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGTCAGCACTGCTGATTaGTATTGGCTGGGCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNVSTAD*YWLGAL Trigger: CAGGGCGCCCAGCCAATAGCAATCAGCAGTGCTGAC...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | CAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACGTGCATTCTGCTGCCTaGTGTTACCCACACACGCAG | + |
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Preference number: 4 (lower is better) Translates to: QVQGDIWKDIHQRADNGYVHSAA*CYPHTQ Trigger: CTGCGTGTGTGGGTAACAGCAGGCAGCAGAATGCAC...GTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATCCAAGGCGGCAAAGGTaGATTCTGCTGCCTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNPRRQR*ILLPAV Trigger: AACAGCAGGCAGCAGAATGCACCTTTGCCGCCTTGG...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATTTACTTGTGCTCCACTaGTGGGCAGCATGTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNLLVLH*WAACAP Trigger: GGGAGCACATGCTGCCCACCAGTGGAGCACAAGTAA...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATCATAGTGTTGGGAGCTaGTACTGGGCCCTCAAAACG | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNHSVGS*YWALKT Trigger: CGTTTTGAGGGCCCAGTATCAGCTCCCAACACTATG...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | GGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACAAAAGGGTGTACAGTCAGCACTGCTaGTTGCTATTGGCTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: GDIWKDIHQRADNGYKRVYSQHC*LLLAGR Trigger: GCGCCCAGCCAATAGCAATCAGCAGTGCTGACTGTA...CACCCTTTTGTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATAAGGTTTCTTTCCCCTaGGCTGGCACCACTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNKVSFP*AGTTLP Trigger: AGGAAGAGTGGTGCCAGCCCAGGGGAAAGAAACCTT...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATTCCAGGGACCTCTTTTaGCCTCTCCTCTGTATGTGT | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNSRDLF*PLLCMC Trigger: ACACATACAGAGGAGAGGTCAAAAGAGGTCCCTGGA...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | GGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACAAAAGGGTGACCTGTAGGTGTCAGTaGAGGGTACAGAGACACCAC | + |
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Preference number: 4 (lower is better) Translates to: GDIWKDIHQRADNGYKRVTCRCQ*RVQRHH Trigger: GTGGTGTCTCTGTACCCTTCACTGACACCTACAGGT...CACCCTTTTGTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | CAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACCTCCTCCCCACAATATaGGCAGCGGGTTGTGTATTT | + |
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Preference number: 4 (lower is better) Translates to: QVQGDIWKDIHQRADNGYLLPTI*AAGCVF Trigger: AAATACACAACCCGCTGCTCATATTGTGGGGAGGAG...GTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | CAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACCGCCTTTATTTTACGTaGAGCCTCTGCAACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QVQGDIWKDIHQRADNGYRLYFT*SLCNRC Trigger: GCACCTGTTGCAGAGGCTGCACGTAAAATAAAGGCG...GTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | GGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACAAAAGGGTGCTGGCAGGACCTCATTaGCTTGGATCAGCCAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: GDIWKDIHQRADNGYKRVLAGPH*LGSASF Trigger: AAAACTGGCTGATCCAAGTCAATGAGGTCCTGCCAG...CACCCTTTTGTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATTCAATAACCAGCACTTaGTCCAGAGGTCTGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNSITST*SRGLAL Trigger: AAGAGCCAGACCTCTGGATCAAGTGCTGGTTATTGA...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | CAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACGTATGTGTCAGCTCCTaGAGGGTGATGATCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: QVQGDIWKDIHQRADNGYVCVSS*RVMIRF Trigger: GAATCTGATCATCACCCTGCAGGAGCTGACACATAC...GTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | CAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACGATGCTCGCGCTTTTTaGAAAAGCCTTATCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QVQGDIWKDIHQRADNGYDARAF*KSLICR Trigger: CCTGCAGATAAGGCTTTTCCAAAAAGCGCGAGCATC...GTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | CAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACCATTCACCAAAGGGCTaGCAATGGTTACAAAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: QVQGDIWKDIHQRADNGYHSPKG*QWLQKG Trigger: ACCCTTTTGTAACCATTGTCAGCCCTTTGGTGAATG...GTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATTTCTCTCTGCCATTTTaGCCACTAAAGGACAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNFSLPF*PLKDRD Trigger: GTCTCTGTCCTTTAGTGGTCAAAATGGCAGAGAGAA...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATACTAGATCCTTACTGTaGCTCAGAAGCATCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNTRSLL*LRSITV Trigger: CACAGTGATGCTTCTGAGCCACAGTAAGGATCTAGT...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGTACAGGGAGATATCTaGAAGGACATTCACCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNVQGDI*KDIHQR Trigger: CCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTAC...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | CAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACTACCCTGCAGGAGACTaGCAATTACAACATTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: QVQGDIWKDIHQRADNGYYPAGD*QLQHSR Trigger: TCTGGAATGTTGTAATTGCCAGTCTCCTGCAGGGTA...GTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | TTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGACCAGAGACCTCAACATaGAATGGGCCCAAGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: FGHSYLYIYLSGYTGTGRPETST*NGPKAA Trigger: TGCCGCCTTGGGCCCATTCCATGTTGAGGTCTCTGG...TCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATTGGAAAAGCCTTATCTaGAGGATTCTCCAAAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNWKSLI*RILQSN Trigger: GTTGCTTTGGAGAATCCTGCAGATAAGGCTTTTCCA...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | TTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGACTGGTAGAAAGAGACTaGGCCCCAGAATTGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: FGHSYLYIYLSGYTGTGRLVERD*APELLG Trigger: CCCCAACAATTCTGGGGCTCAGTCTCTTTCTACCAG...TCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | CAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACCTGAATACAACAAGATaGTCGCGCTTTTTGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: QVQGDIWKDIHQRADNGYLNTTR*SRFLEK Trigger: CTTTTCCAAAAAGCGCGAGCATCTTGTTGTATTCAG...GTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | TTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGATGGCAAAGGTGCATTCTaGTGCCTGCTGTTACCCACA | + |
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Preference number: 4 (lower is better) Translates to: LVTLIYTYIYLGTQVQGDGKGAF*CLLLPT Trigger: TGTGGGTAACAGCAGGCAGCAGAATGCACCTTTGCC...ATCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | TTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGACCCCATCCACTGTGCTaGTATGCAAGACCTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FGHSYLYIYLSGYTGTGRPHPLC*YARPLL Trigger: GAGAAGAGGTCTTGCATACCAGCACAGTGGATGGGG...TCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | TTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGAAAAGGTGCATTCTGCTaGCTGCTGTTACCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: FGHSYLYIYLSGYTGTGRKGAFC*LLLPTH Trigger: GTGTGTGGGTAACAGCAGGCAGCAGAATGCACCTTT...TCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATCAAAACGGAACTCAATaGTTGTGTGTCACAGATTTA | + |
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Preference number: 4 (lower is better) Translates to: GTQVQGDIWKDIHQRADNQNGTQ*LCVTDL Trigger: TAAATCTGTGACACACAACCATTGAGTTCCGTTTTG...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | TTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGACCAAAGCAACGTTCCTaGGCTGTGCCTGCCTTATAT | + |
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Preference number: 4 (lower is better) Translates to: FGHSYLYIYLSGYTGTGRPKQRS*AVPALY Trigger: ATATAAGGCAGGCACAGCCCAGGAACGTTGCTTTGG...TCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | AGCACTTATATTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGGACCTCAACATGGAATaGGCCCAAGGCGGCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: STYIWSLLSIHISIWVHRDLNME*AQGGKG Trigger: ACCTTTGCCGCCTTGGGCCCATTCCATGTTGAGGTC...CCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAATATAAGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | AGCACTTATATTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGGCCTCAAGACAGCTCTaGAATCCGCCGCACAGAATT | + |
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Preference number: 4 (lower is better) Translates to: STYIWSLLSIHISIWVHRASRQL*NPPHRI Trigger: AATTCTGTGCGGCGGATTGCAGAGCTGTCTTGAGGC...CCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAATATAAGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | AGCACTTATATTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGACTGCTGATTGCTATTaGCTGGGCGCCCTGAAATGC | + |
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Preference number: 4 (lower is better) Translates to: STYIWSLLSIHISIWVHRTADCY*LGALKC Trigger: GCATTTCAGGGCGCCCAGCCAATAGCAATCAGCAGT...CCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAATATAAGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | TTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGATCCCATTACCAGACTCTaGATACAGTCAAGGACTCAT | + |
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Preference number: 4 (lower is better) Translates to: LVTLIYTYIYLGTQVQGDPITRL*IQSRTH Trigger: ATGAGTCCTTGACTGTATTCAGAGTCTGGTAATGGG...ATCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | TTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGATTGTGGGGAAGCAGTCTaGAGTAGCATTCTCTATCTT | + |
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Preference number: 4 (lower is better) Translates to: LVTLIYTYIYLGTQVQGDCGEAV*SSILYL Trigger: AAGATAGAGAATGCTACTGCAGACTGCTTCCCCACA...ATCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | TTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGAAACGTTCCTGGGCTGTaGCTGCCTTATATTTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: FGHSYLYIYLSGYTGTGRNVPGL*LPYISV Trigger: TACTGAAATATAAGGCAGGCACAGCCCAGGAACGTT...TCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | AGCACTTATATTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGCATGGGCAGTCACACTaGTTTCAGACTCCCCAAACA | + |
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Preference number: 4 (lower is better) Translates to: STYIWSLLSIHISIWVHRHGQSH*FQTPQT Trigger: TGTTTGGGGAGTCTGAAAGCAGTGTGACTGCCCATG...CCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAATATAAGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | TTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGATGTTGCAAGCGAGTCTaGTTTGCATCTTTCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FGHSYLYIYLSGYTGTGRCCKRV*FASFSA Trigger: AGCTGAGAAAGATGCAAACCAGACTCGCTTGCAACA...TCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CCA 90 bp | TTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGATTAACTCCAGGAAATTaGGAAGCCGCTCCTGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: FGHSYLYIYLSGYTGTGRLTPGN*EAAPAY Trigger: ATAAGCAGGAGCGGCTTCCCAATTTCCTGGAGTTAA...TCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | AGCACTTATATTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGATTCCCCATCCACTGTaGTGGTATGCAAGACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STYIWSLLSIHISIWVHRIPHPL*WYARPL Trigger: AAGAGGTCTTGCATACCAGCACAGTGGATGGGGAAT...CCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAATATAAGTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR TCA 90 bp | AGCACTTATATTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGCATTCTCTATCTTCCTaGATAGCCTTGCAGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: STYIWSLLSIHISIWVHRHSLSS*IALQCI Trigger: AATGCACTGCAAGGCTATTCAGGAAGATAGAGAATG...CCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAATATAAGTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR GCA 90 bp | AGCACTTATATTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGCTATTTCTATCACGTTaGAGTTACAGTCAGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: STYIWSLLSIHISIWVHRLFLSR*SYSQHC Trigger: GCAGTGCTGACTGTAACTGCAACGTGATAGAAATAG...CCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAATATAAGTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS GCA 90 bp | CCTCCCCAGAGACCTCAACATGGAATGGGCCCAAGGCGGCAAAGGTaGATTCTGCTGCCTGCTGTTACCCACACACGCAGTGATGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPQRPQHGMGPRRQR*ILLPAVTHTRSDAS Trigger: GCTAGCATCACTGCGTGTGTGGGTAACAGCAGGCAGCAGAATGCACCTTTGCCGCCTTGGGCCCATTCCATGTTGAGGTCTCTGGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS GCA 90 bp | GACCTCAACATGGAATGGGCCCAAGGCGGCAAAGGTGCATTCTGCTaGCTGCTGTTACCCACACACGCAGTGATGCTAGCCATGACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DLNMEWAQGGKGAFC*LLLPTHAVMLAMTD Trigger: GTCAGTCATGGCTAGCATCACTGCGTGTGTGGGTAACAGCAGGCAGCAGAATGCACCTTTGCCGCCTTGGGCCCATTCCATGTTGAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS CCA 90 bp | ACCACTAAAGGACAGAGACTCCTCCCCAGAGACCTCAACATGGAATaGGCCCAAGGCGGCAAAGGTGCATTCTGCTGCCTGCTGTTACCC | + |
|
Preference number: 5 (lower is better) Translates to: TTKGQRLLPRDLNME*AQGGKGAFCCLLLP Trigger: GGGTAACAGCAGGCAGCAGAATGCACCTTTGCCGCCTTGGGCCCATTCCATGTTGAGGTCTCTGGGGAGGAGTCTCTGTCCTTTAGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS GCA 90 bp | AGAGACCTCAACATGGAATGGGCCCAAGGCGGCAAAGGTGCATTCTaGTGCCTGCTGTTACCCACACACGCAGTGATGCTAGCCATGACT | + |
|
Preference number: 5 (lower is better) Translates to: RDLNMEWAQGGKGAF*CLLLPTHAVMLAMT Trigger: AGTCATGGCTAGCATCACTGCGTGTGTGGGTAACAGCAGGCAGCAGAATGCACCTTTGCCGCCTTGGGCCCATTCCATGTTGAGGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGGTACGGCCGACTTTaGTCCACTGGGTGTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTQVQGDIWKDIHQRADNGYGRL*STGCRR Trigger: TCTGCGACACCCAGTGGACAAAAGTCGGCCGTACCC...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS TCA 90 bp | TTACTGTGGCTCAGAAGCATCACTGTGTTCTCCAGGGACCTCTTTTaGCCTCTCCTCTGTATGTGTCAGCTCATGAGCTCGGAAACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLWLRSITVFSRDLF*PLLCMCQLMSSETS Trigger: GCTAGTTTCCGAGCTCATGAGCTGACACATACAGAGGAGAGGTCAAAAGAGGTCCCTGGAGAACACAGTGATGCTTCTGAGCCACAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422784.5 |
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| CDS GCA 90 bp | AAATTGGGAAGCCGCTCCTGCTTATTTGCATACATCCTGAGAAGATaGTTAAGCCTGAAGCGCAGGTCCCTATTCAGCTCAGCGCCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: KLGSRSCLFAYILRR*LSLKRRSLFSSAPK Trigger: TTTAGGCGCTGAGCTGAATAGGGACCTGCGCTTCAGGCTTAAGCATCTTCTCAGGATGTATGCAAATAAGCAGGAGCGGCTTCCCAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | GGTACACAGGTACAGGGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATAGTTCGGATTCGGCTTaGATGACCTTAATCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTQVQGDIWKDIHQRADNSSDSA*MTLIQA Trigger: TGCCTGGATTAAGGTCATCAAAGCCGAATCCGAACT...ATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCCCTGTACCTGTGTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | GGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACAAAAGGGTGGAGGGGCGACAACTGTaGCTTCTAATTCTAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: GDIWKDIHQRADNGYKRVEGRQL*LLILDD Trigger: GTCATCTAGAATTAGAAGCAACAGTTGTCGCCCCTC...CACCCTTTTGTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | GGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACAAAAGGGTGATTAACTCCAGGAAATaGGGAAGCCGCTCCTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GDIWKDIHQRADNGYKRVINSRK*GSRSCL Trigger: TAAGCAGGAGCGGCTTCCCAATTTCCTGGAGTTAAT...CACCCTTTTGTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS GCA 90 bp | TCCCTTATCATCTTGATTAACTCCAGGAAATTGGGAAGCCGCTCCTaGTTATTTGCATACATCCTGAGAAGATGCTTAAGCCTGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SLIILINSRKLGSRS*LFAYILRRCLSLKR Trigger: GCGCTTCAGGCTTAAGCATCTTCTCAGGATGTATGCAAATAAGCAGGAGCGGCTTCCCAATTTCCTGGAGTTAATCAAGATGATAAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | TTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGACTCAATCACACCCCCTaGTCAACGTTTCCCCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: FGHSYLYIYLSGYTGTGRLNHTP*STFPPL Trigger: TAACGGGGGAAACGTTGACAAGGGGGTGTGATTGAG...TCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | GGAGATATCTGGAAGGACATTCACCAAAGGGCTGACAATGGTTACAAAAGGGTGTTTCTCTCTGCCATTTaGACCACTAAAGGACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GDIWKDIHQRADNGYKRVFLSAI*TTKGQR Trigger: TCTCTGTCCTTTAGTGGTCAAAATGGCAGAGAGAAA...CACCCTTTTGTAACCATTGTCAGCCCTTTGGTGAATGTCCTTCCAGATATCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS GCA 90 bp | TCTATCTTCCTGAATAGCCTTGCAGTGCATTTTATATCTGCCCAGTaGCTTAACAATACCCTGCAGGAGACTGGCAATTACAACATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SIFLNSLAVHFISAQ*LNNTLQETGNYNIP Trigger: TGGAATGTTGTAATTGCCAGTCTCCTGCAGGGTATTGTTAAGGCACTGGGCAGATATAAAATGCACTGCAAGGCTATTCAGGAAGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | TTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGATTCTGGCAGGACCTCATaGACTTGGATCAGCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVTLIYTYIYLGTQVQGDSGRTS*TWISQF Trigger: AAACTGGCTGATCCAAGTCAATGAGGTCCTGCCAGA...ATCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | AGCACTTATATTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGGGAGGCTTTCTCCCCTaGTGCCTGCAGGGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: STYIWSLLSIHISIWVHRGGFLP*CLQGVK Trigger: TTTAACACCCTGCAGGCACAAGGGGAGAAAGCCTCC...CCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAATATAAGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | AGCACTTATATTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGCTAGATGACATAGTGTaGGGAGCTGATACTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: STYIWSLLSIHISIWVHRLDDIV*GADTGP Trigger: GGGCCCAGTATCAGCTCCCAACACTATGTCATCTAG...CCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAATATAAGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | TTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGATATCAATAACCAGCACTaGATCCAGAGGTCTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVTLIYTYIYLGTQVQGDINNQH*IQRSGS Trigger: AGAGCCAGACCTCTGGATCAAGTGCTGGTTATTGAT...ATCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | AGCACTTATATTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGAGATGCTCGCGCTTTTaGGAAAAGCCTTATCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: STYIWSLLSIHISIWVHRRCSRF*EKPYLQ Trigger: CTGCAGATAAGGCTTTTCCAAAAAGCGCGAGCATCT...CCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAATATAAGTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | TTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGTACAGGGAGATCTATTTCTATCACGTaGCAGTTACAGTCAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FGHSYLYIYLSGYTGTGRSISIT*QLQSAL Trigger: CAGTGCTGACTGTAACTGCAACGTGATAGAAATAGA...TCTCCCTGTACCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS-3UTR CAA 90 bp | AGCACTTATATTTGGTCACTCTTATCTATACATATATCTATCTGGGTACACAGGCAGGACCTCATTGACTaGGATCAGCCAGTTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: STYIWSLLSIHISIWVHRQDLID*DQPVFK Trigger: TTTGAAAACTGGCTGATCCAAGTCAATGAGGTCCTG...CCTGTGTACCCAGATAGATATATGTATAGATAAGAGTGACCAAATATAAGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650639.1 |
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| CDS CCA 72 bp | GGACAGAGACTCCTCCCCAGAGACCTCAACATGGAATaGGCCCAAGGCGGCAAAGGTGCATTCTGCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GQRLLPRDLNME*AQGGKGAFCCL Trigger: CAGGCAGCAGAATGCACCTTTGCCGCCTTGGGCCCATTCCATGTTGAGGTCTCTGGGGAGGAGTCTCTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS GCA 72 bp | ATGGAATGGGCCCAAGGCGGCAAAGGTGCATTCTGCTaGCTGCTGTTACCCACACACGCAGTGATGCTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: MEWAQGGKGAFC*LLLPTHAVMLA Trigger: GGCTAGCATCACTGCGTGTGTGGGTAACAGCAGGCAGCAGAATGCACCTTTGCCGCCTTGGGCCCATTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS GCA 72 bp | AGACCTCAACATGGAATGGGCCCAAGGCGGCAAAGGTaGATTCTGCTGCCTGCTGTTACCCACACACGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RPQHGMGPRRQR*ILLPAVTHTRS Trigger: ACTGCGTGTGTGGGTAACAGCAGGCAGCAGAATGCACCTTTGCCGCCTTGGGCCCATTCCATGTTGAGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS TCA 72 bp | CTCAGAAGCATCACTGTGTTCTCCAGGGACCTCTTTTaGCCTCTCCTCTGTATGTGTCAGCTCATGAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRSITVFSRDLF*PLLCMCQLMSS Trigger: CGAGCTCATGAGCTGACACATACAGAGGAGAGGTCAAAAGAGGTCCCTGGAGAACACAGTGATGCTTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422784.5 |
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| CDS TCA 72 bp | GTCTGGTTTGCATCTTTCTCAGCTAGGATGCCTGCCTaGATAGCATTCTGGAGCTGCACCTCTAAACGGATC | + |
|
Preference number: 6 (lower is better) Translates to: VWFASFSARMPA*IAFWSCTSKRI Trigger: GATCCGTTTAGAGGTGCAGCTCCAGAATGCTATTCAGGCAGGCATCCTAGCTGAGAAAGATGCAAACCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS GCA 72 bp | AGGTCCCTATTCAGCTCAGCGCCTAAAAGAAGCTGTTaGAAGCGAGTCTGGTTTGCATCTTTCTCAGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLFSSAPKRSC*KRVWFASFSAR Trigger: CCTAGCTGAGAAAGATGCAAACCAGACTCGCTTGCAACAGCTTCTTTTAGGCGCTGAGCTGAATAGGGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS GCA 72 bp | AGCCGCTCCTGCTTATTTGCATACATCCTGAGAAGATaGTTAAGCCTGAAGCGCAGGTCCCTATTCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRSCLFAYILRR*LSLKRRSLFSS Trigger: TGAGCTGAATAGGGACCTGCGCTTCAGGCTTAAGCATCTTCTCAGGATGTATGCAAATAAGCAGGAGCGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS CCA 72 bp | GCGCTTGAGTTTTTCCTCCTCAGACATACTCCAATCTaGCAGGACCTCATTGACTTGGATCAGCCAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ALEFFLLRHTPI*QDLIDLDQPVF Trigger: GAAAACTGGCTGATCCAAGTCAATGAGGTCCTGCCAGATTGGAGTATGTCTGAGGAGGAAAAACTCAAGCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS TCA 72 bp | AAAGGTTTCTTTCCCCTGGGCTGGCACCACTCTTCCTaGGAACAACTTCATGTTTCTCTCTGCCATTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: KGFFPLGWHHSS*EQLHVSLCHFD Trigger: GTCAAAATGGCAGAGAGAAACATGAAGTTGTTCTCAGGAAGAGTGGTGCCAGCCCAGGGGAAAGAAACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS CAA 72 bp | CTTCCTGAGAACAACTTCATGTTTCTCTCTGCCATTTaGACCACTAAAGGACAGAGACTCCTCCCCAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LPENNFMFLSAI*TTKGQRLLPRD Trigger: GTCTCTGGGGAGGAGTCTCTGTCCTTTAGTGGTCAAAATGGCAGAGAGAAACATGAAGTTGTTCTCAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS CAA 72 bp | CTCAGACATACTCCAATCTGGCAGGACCTCATTGACTaGGATCAGCCAGTTTTCAAAGGTTTCTTTCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LRHTPIWQDLID*DQPVFKGFFPL Trigger: CAGGGGAAAGAAACCTTTGAAAACTGGCTGATCCAAGTCAATGAGGTCCTGCCAGATTGGAGTATGTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS GCA 72 bp | CTGAATAGCCTTGCAGTGCATTTTATATCTGCCCAGTaGCTTAACAATACCCTGCAGGAGACTGGCAATTAC | + |
|
Preference number: 6 (lower is better) Translates to: LNSLAVHFISAQ*LNNTLQETGNY Trigger: GTAATTGCCAGTCTCCTGCAGGGTATTGTTAAGGCACTGGGCAGATATAAAATGCACTGCAAGGCTATTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS GCA 72 bp | ATCTGCAGGATTCTCCAAAGCAACGTTCCTGGGCTGTaGCTGCCTTATATTTCAGTAGGGATTCTAAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ICRILQSNVPGL*LPYISVGILRK Trigger: TTTCCTTAGAATCCCTACTGAAATATAAGGCAGGCACAGCCCAGGAACGTTGCTTTGGAGAATCCTGCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS CAA 72 bp | TCCTCCTCAGACATACTCCAATCTGGCAGGACCTCATaGACTTGGATCAGCCAGTTTTCAAAGGTTTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSDILQSGRTS*TWISQFSKVSF Trigger: GAAAGAAACCTTTGAAAACTGGCTGATCCAAGTCAATGAGGTCCTGCCAGATTGGAGTATGTCTGAGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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| CDS CAA 72 bp | TCTTCCTCCCTTATCATCTTGATTAACTCCAGGAAATaGGGAAGCCGCTCCTGCTTATTTGCATACATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLIILINSRK*GSRSCLFAYIL Trigger: CAGGATGTATGCAAATAAGCAGGAGCGGCTTCCCAATTTCCTGGAGTTAATCAAGATGATAAGGGAGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537356.3 ENST00000650639.1 |
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