RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB40 (Homo sapiens)

Ensembl gene IDs: ENSG00000184677

Ensembl transcript IDs: ENST00000374651.8, ENST00000375647.5, ENST00000400239.6, ENST00000404138.5, ENST00000650433.1

Found 1432 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCAGGCTGGCCGGAGCTGGCGCTCGCTGTGGAAACCGTCGGGGCTaGCTGCACAAAGCCGGCAGATGCCAGTCAGTGGGCGTGCTGGTC +
Preference number: 1 (lower is better)
Translates to: PRLAGAGARCGNRRG*LHKAGRCQSVGVLV
Trigger: GACCAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTGCAGGCAGCCCCGACGGTTTCCACAGCGAGCGCCAGCTCCGGCCAGCCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp GGCTGGGATGAGCTGTCCCAGGCTGGCCGGAGCTGGCGCTCGCTGTaGAAACCGTCGGGGCTGCCTGCACAAAGCCGGCAGATGCCAGTC +
Preference number: 1 (lower is better)
Translates to: GWDELSQAGRSWRSL*KPSGLPAQSRQMPV
Trigger: GACTGGCATCTGCCGGCTTTGTGCAGGCAGCCCCGACGGTTTCCACAGCGAGCGCCAGCTCCGGCCAGCCTGGGACAGCTCATCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp ACAAGGCAGGGAGTGGGCGGCAGCAGAGCCACGGGCAGTCACGGCTaGTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCAC +
Preference number: 1 (lower is better)
Translates to: TRQGVGGSRATGSHG*SSTRRQDCLPGAGH
Trigger: GTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCCCGTGGCTCTGCTGCCGCCCACTCCCTGCCTTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp GGGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTaGTGCTGGTCACAGTCTGCACCATATGACCCAGAGGGAGCCAGG +
Preference number: 1 (lower is better)
Translates to: GQSRLLLHTQTGLPA*CWSQSAPYDPEGAR
Trigger: CCTGGCTCCCTCTGGGTCATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp CAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTaGTGGTCACAGTCTGCACCATATGACCCAGAGGGAGCCAGGCTG +
Preference number: 1 (lower is better)
Translates to: QSRLLLHTQTGLPAW*WSQSAPYDPEGARL
Trigger: CAGCCTGGCTCCCTCTGGGTCATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp AGAGCCACGGGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTaGCTGCCTGGTGCTGGTCACAGTCTGCACCATATGACCCAGAGG +
Preference number: 1 (lower is better)
Translates to: RATGSHGCSSTRRQD*LPGAGHSLHHMTQR
Trigger: CCTCTGGGTCATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCCCGTGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp GTCGGGGCTGCCTGCACAAAGCCGGCAGATGCCAGTCAGTGGGCGTaGTGGTCAGTAAGGCTGTGCCTTCTGCGCTTCAAGCAGGGTGAG +
Preference number: 1 (lower is better)
Translates to: VGAACTKPADASQWA*WSVRLCLLRFKQGE
Trigger: CTCACCCTGCTTGAAGCGCAGAAGGCACAGCCTTACTGACCAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTGCAGGCAGCCCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp CTCACCACTCAGGACAGCCAGGGATGGAGGGCAAAGGGCAAGCTGTaGGGCCTCCTCTCTGCTGCAAACGCAGGAAGGCTCTGCCGGATG +
Preference number: 1 (lower is better)
Translates to: LTTQDSQGWRAKGKL*GLLSAANAGRLCRM
Trigger: CATCCGGCAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCCCACAGCTTGCCCTTTGCCCTCCATCCCTGGCTGTCCTGAGTGGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp TCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTaGTCACAGTCTGCACCATATGACCCAGAGGGAGCCAGGCTGCCA +
Preference number: 1 (lower is better)
Translates to: SRLLLHTQTGLPAWC*SQSAPYDPEGARLP
Trigger: TGGCAGCCTGGCTCCCTCTGGGTCATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp GGGGCTGCCTGCACAAAGCCGGCAGATGCCAGTCAGTGGGCGTGCTaGTCAGTAAGGCTGTGCCTTCTGCGCTTCAAGCAGGGTGAGACC +
Preference number: 1 (lower is better)
Translates to: GAACTKPADASQWAC*SVRLCLLRFKQGET
Trigger: GGTCTCACCCTGCTTGAAGCGCAGAAGGCACAGCCTTACTGACCAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTGCAGGCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp GAAACCGTCGGGGCTGCCTGCACAAAGCCGGCAGATGCCAGTCAGTaGGCGTGCTGGTCAGTAAGGCTGTGCCTTCTGCGCTTCAAGCAG +
Preference number: 1 (lower is better)
Translates to: ETVGAACTKPADASQ*ACWSVRLCLLRFKQ
Trigger: CTGCTTGAAGCGCAGAAGGCACAGCCTTACTGACCAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTGCAGGCAGCCCCGACGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp CTGCGTATCAAAATGTGGACAGGACCAGAAGCAGGTGTAGTCGGCTaGGATGAGCTGTCCCAGGCTGGCCGGAGCTGGCGCTCGCTGTGG +
Preference number: 1 (lower is better)
Translates to: LRIKMWTGPEAGVVG*DELSQAGRSWRSLW
Trigger: CCACAGCGAGCGCCAGCTCCGGCCAGCCTGGGACAGCTCATCCCAGCCGACTACACCTGCTTCTGGTCCTGTCCACATTTTGATACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp CCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGCCCACTaGGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTGGTCACC +
Preference number: 1 (lower is better)
Translates to: PHCGPSPISNCHSAH*ALSAHHASWGTLVT
Trigger: GGTGACCAGGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp GCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATaGCCCAGAGGGAGCCAGGCTGCCAGGTCAGGCAGAGATTTCAGC +
Preference number: 1 (lower is better)
Translates to: ADRTACLVLVTVCTI*PRGSQAARSGRDFS
Trigger: GCTGAAATCTCTGCCTGACCTGGCAGCCTGGCTCCCTCTGGGTCATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp CTCCCCTCCACAGGGGGTCAAGCCACACAAGGTGGCAGACAGCCCTaGCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGCA +
Preference number: 1 (lower is better)
Translates to: LPSTGGQATQGGRQP*LVCKHRTSRLQPLA
Trigger: TGCCAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCCACCTTGTGTGGCTTGACCCCCTGTGGAGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp GACAGCGGGACAGCTGGATGTACCCAGGCTGGACACCAAAGCCTGTaGTCTGAAACCCTGCCCCACACTTGCTCCCTGGGAAGGAGGGTT +
Preference number: 1 (lower is better)
Translates to: DSGTAGCTQAGHQSL*SETLPHTCSLGRRV
Trigger: AACCCTCCTTCCCAGGGAGCAAGTGTGGGGCAGGGTTTCAGAGCACAGGCTTTGGTGTCCAGCCTGGGTACATCCAGCTGTCCCGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp CCTCCACAGGGGGTCAAGCCACACAAGGTGGCAGACAGCCCTGCCTaGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGCATGGA +
Preference number: 1 (lower is better)
Translates to: PPQGVKPHKVADSPA*CVNTAPADSNLWHG
Trigger: TCCATGCCAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCCACCTTGTGTGGCTTGACCCCCTGTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp GTGACCAAACGTGACTCCTGCCTCTGTACATGGCAATGTGAGATGTaGCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCC +
Preference number: 1 (lower is better)
Translates to: VTKRDSCLCTWQCEM*LEGRGGPISASVGS
Trigger: GGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATCTCACATTGCCATGTACAGAGGCAGGAGTCACGTTTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp GACCCCAGTATTCCCACAGAATCACACTCCAGCCTGGAATCTGACTaGCTTTCCCTCCTCACCACCTGGGCCATGAGCTCTGGGAGCAGA +
Preference number: 1 (lower is better)
Translates to: DPSIPTESHSSLESD*LSLLTTWAMSSGSR
Trigger: TCTGCTCCCAGAGCTCATGGCCCAGGTGGTGAGGAGGGAAAGGCAGTCAGATTCCAGGCTGGAGTGTGATTCTGTGGGAATACTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp CCAAACGTGACTCCTGCCTCTGTACATGGCAATGTGAGATGTGCCTaGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACC +
Preference number: 1 (lower is better)
Translates to: PNVTPASVHGNVRCA*KEGVAPSLPVWDPT
Trigger: GGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATCTCACATTGCCATGTACAGAGGCAGGAGTCACGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp CTGGATGTACCCAGGCTGGACACCAAAGCCTGTGCTCTGAAACCCTaGCCCACACTTGCTCCCTGGGAAGGAGGGTTTAGGAATGAGACT +
Preference number: 1 (lower is better)
Translates to: LDVPRLDTKACALKP*PTLAPWEGGFRNET
Trigger: AGTCTCATTCCTAAACCCTCCTTCCCAGGGAGCAAGTGTGGGGCAGGGTTTCAGAGCACAGGCTTTGGTGTCCAGCCTGGGTACATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp CCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTaGACTTGGCACCAATGCCCTGTAAGCATGTGCCACTCTACGATC +
Preference number: 1 (lower is better)
Translates to: PSPIPQLVRGWILIH*TWHQCPVSMCHSTI
Trigger: GATCGTAGAGTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp CCTGGTCACCAGCTCCCATCCCACTGCTCTTTCAGACTCTACTTCTaGAGCCACATGTCACTTGGGGATGGACAGTGTCATAGAGGCCGC +
Preference number: 1 (lower is better)
Translates to: PGHQLPSHCSFRLYF*SHMSLGDGQCHRGR
Trigger: GCGGCCTCTATGACACTGTCCATCCCCAAGTGACATGTGGCTTCAGAAGTAGAGTCTGAAAGAGCAGTGGGATGGGAGCTGGTGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp GGTGCTGGTCACAGTCTGCACCATATGACCCAGAGGGAGCCAGGCTaGCAGGTCAGGCAGAGATTTCAGCCTTTGATTAAAGGAAGGGGA +
Preference number: 1 (lower is better)
Translates to: GAGHSLHHMTQREPG*QVRQRFQPLIKGRG
Trigger: TCCCCTTCCTTTAATCAAAGGCTGAAATCTCTGCCTGACCTGGCAGCCTGGCTCCCTCTGGGTCATATGGTGCAGACTGTGACCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp CATTCACTGCAACTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTaGATTCTCATCCACTGGACTTGGCACCAATGCCCTGTAAGCATG +
Preference number: 1 (lower is better)
Translates to: HSLQLPSPIPQLVRG*ILIHWTWHQCPVSM
Trigger: CATGCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAGTTGCAGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp TGGGGAGGGAGGCCTGTCTGCTACAGAGGATGGTGCTGTTGGTGTTaGGGGCTCAGATGCTGTTGGTTCTATGAGAACAACGAAGCTTCC +
Preference number: 1 (lower is better)
Translates to: WGGRPVCYRGWCCWC*GLRCCWFYENNEAS
Trigger: GGAAGCTTCGTTGTTCTCATAGAACCAACAGCATCTGAGCCCTCAACACCAACAGCACCATCCTCTGTAGCAGACAGGCCTCCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp GCCTGGGCTTCTCTAGAGAGCAAGACTATAAAATCAGTCAGCCAGTaGGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTC +
Preference number: 1 (lower is better)
Translates to: AWASLESKTIKSVSQ*GAHSEQTVNSGRAF
Trigger: GAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCTGACTGATTTTATAGTCTTGCTCTCTAGAGAAGCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp AGGCATGAAGCTGACATGCCTTCCGTGGTCAGTGGGAAGTCAGAATaGTTCCTCAGAGGAGACCTGGATTGCCAGGGAAACCTGGTACTC +
Preference number: 1 (lower is better)
Translates to: RHEADMPSVVSGKSE*FLRGDLDCQGNLVL
Trigger: GAGTACCAGGTTTCCCTGGCAATCCAGGTCTCCTCTGAGGAAGCATTCTGACTTCCCACTGACCACGGAAGGCATGTCAGCTTCATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp TCAGCCCCGATTATCAGAACTCTAGCCCGAGGCATGAAGCTGACATaGCTTCCGTGGTCAGTGGGAAGTCAGAATGCTTCCTCAGAGGAG +
Preference number: 1 (lower is better)
Translates to: SAPIIRTLARGMKLT*LPWSVGSQNASSEE
Trigger: CTCCTCTGAGGAAGCATTCTGACTTCCCACTGACCACGGAAGGCATGTCAGCTTCATGCCTCGGGCTAGAGTTCTGATAATCGGGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp CCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTaGCACCAATGCCCTGTAAGCATGTGCCACTCTACGATCTTTCAG +
Preference number: 1 (lower is better)
Translates to: PIPQLVRGWILIHWT*HQCPVSMCHSTIFQ
Trigger: CTGAAAGATCGTAGAGTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp TTTAATGACATTCACTGCAACTCCCAAGCCCCATCCCACAGCTTGTaGGGGGCTGGATTCTCATCCACTGGACTTGGCACCAATGCCCTG +
Preference number: 1 (lower is better)
Translates to: FNDIHCNSQAPSHSL*GAGFSSTGLGTNAL
Trigger: CAGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAGTTGCAGTGAATGTCATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp TCCTCAGAGGAGACCTGGATTGCCAGGGAAACCTGGTACTCACACTaGAGACCCTGCTACTCACTGGGCTCAAAGTTTCCCAAACACAGA +
Preference number: 1 (lower is better)
Translates to: SSEETWIARETWYSH*RPCYSLGSKFPKHR
Trigger: TCTGTGTTTGGGAAACTTTGAGCCCAGTGAGTAGCAGGGTCTGCAGTGTGAGTACCAGGTTTCCCTGGCAATCCAGGTCTCCTCTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp GAACGAGGCAAAAACAACACCGGGACCCCATGGAAGCGAGCGATGTaGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATT +
Preference number: 1 (lower is better)
Translates to: ERGKNNTGTPWKRAM*TQETTQTLSSMAAI
Trigger: AATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCACATCGCTCGCTTCCATGGGGTCCCGGTGTTGTTTTTGCCTCGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp CCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGGGGTGCTaGACTCACCCTTGGGGAGGACTCATTATAGCATCCCTGCTTTTT +
Preference number: 1 (lower is better)
Translates to: PPKYHWDTSRTGLGC*THPWGGLIIASLLF
Trigger: AAAAAGCAGGGATGCTATAATGAGTCCTCCCCAAGGGTGAGTTCAGCACCCCAGCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp ATCTGTTTTCTAGGTGAGACTGTGTTGGTTGGTGCTAAGCTAAGATaGTCACCACTCAGGACAGCCAGGGATGGAGGGCAAAGGGCAAGC +
Preference number: 1 (lower is better)
Translates to: ICFLGETVLVGAKLR*SPLRTARDGGQRAS
Trigger: GCTTGCCCTTTGCCCTCCATCCCTGGCTGTCCTGAGTGGTGAGCATCTTAGCTTAGCACCAACCAACACAGTCTCACCTAGAAAACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp TGGATTCTCATCCACTGGACTTGGCACCAATGCCCTGTAAGCATGTaGCACTCTACGATCTTTCAGTGGGTTTTCTCTGCTGCCAAGGGG +
Preference number: 1 (lower is better)
Translates to: WILIHWTWHQCPVSM*HSTIFQWVFSAAKG
Trigger: CCCCTTGGCAGCAGAGAAAACCCACTGAAAGATCGTAGAGTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp CAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTGGCACCAATaGCCTGTAAGCATGTGCCACTCTACGATCTTTCAGTGGGTTTTC +
Preference number: 1 (lower is better)
Translates to: QLVRGWILIHWTWHQ*PVSMCHSTIFQWVF
Trigger: GAAAACCCACTGAAAGATCGTAGAGTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp AGTCAGAATGCTTCCTCAGAGGAGACCTGGATTGCCAGGGAAACCTaGTACTCACACTGCAGACCCTGCTACTCACTGGGCTCAAAGTTT +
Preference number: 1 (lower is better)
Translates to: SQNASSEETWIARET*YSHCRPCYSLGSKF
Trigger: AAACTTTGAGCCCAGTGAGTAGCAGGGTCTGCAGTGTGAGTACCAGGTTTCCCTGGCAATCCAGGTCTCCTCTGAGGAAGCATTCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp GTCCAACTGCCTAGGCCCAATTTAATAACATGCTGCTTGTCTCCCTaGAACCGCCTGCCCACTCTATACATGGTTAGCACTTCCCTCCCT +
Preference number: 1 (lower is better)
Translates to: VQLPRPNLITCCLSP*NRLPTLYMVSTSLP
Trigger: AGGGAGGGAAGTGCTAACCATGTATAGAGTGGGCAGGCGGTTCCAGGGAGACAAGCAGCATGTTATTAAATTGGGCCTAGGCAGTTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp ATTCAGTGCCATTTTGCCACCTGCAGATCAAGAGCTCTCCCAGACTaGCAGTTCCCAGGACGGAAAAGCCTTAATACAGGCACAGCCTTG +
Preference number: 1 (lower is better)
Translates to: IQCHFATCRSRALPD*QFPGRKSLNTGTAL
Trigger: CAAGGCTGTGCCTGTATTAAGGCTTTTCCGTCCTGGGAACTGTCAGTCTGGGAGAGCTCTTGATCTGCAGGTGGCAAAATGGCACTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp CATGTGGGAGCAATAAAAGCTTCCATGGTGACCAAACGTGACTCCTaGCTCTGTACATGGCAATGTGAGATGTGCCTGGAAGGAAGGGGT +
Preference number: 1 (lower is better)
Translates to: HVGAIKASMVTKRDS*LCTWQCEMCLEGRG
Trigger: ACCCCTTCCTTCCAGGCACATCTCACATTGCCATGTACAGAGGCAGGAGTCACGTTTGGTCACCATGGAAGCTTTTATTGCTCCCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp CATCTGATGGGCCCCGGCAGCCAGTCCACTCTCGGCACAGTAAGCTaGAAATCTGGTGATTCCGAAGAAAACAAATGTCTTGTCACAATC +
Preference number: 1 (lower is better)
Translates to: HLMGPGSQSTLGTVS*KSGDSEENKCLVTI
Trigger: GATTGTGACAAGACATTTGTTTTCTTCGGAATCACCAGATTTGCAGCTTACTGTGCCGAGAGTGGACTGGCTGCCGGGGCCCATCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp GCGTGGACAGTAGGAGTCTCACCTTCCCGCAGTAATCCTTGCTCTTaGATCATCTATTTGCTGTCTCACTTACCTATGATGGGCAAGTCC +
Preference number: 1 (lower is better)
Translates to: AWTVGVSPSRSNPCS*IIYLLSHLPMMGKS
Trigger: GGACTTGCCCATCATAGGTAAGTGAGACAGCAAATAGATGATTCAAGAGCAAGGATTACTGCGGGAAGGTGAGACTCCTACTGTCCACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp TTCTCCATTATCGTCCAACTGCCTAGGCCCAATTTAATAACATGCTaGTTGTCTCCCTGGAACCGCCTGCCCACTCTATACATGGTTAGC +
Preference number: 1 (lower is better)
Translates to: FSIIVQLPRPNLITC*LSPWNRLPTLYMVS
Trigger: GCTAACCATGTATAGAGTGGGCAGGCGGTTCCAGGGAGACAAGCAGCATGTTATTAAATTGGGCCTAGGCAGTTGGACGATAATGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp TTCCAGCAGAAACTCCAGAGCTTTGTTTTGGGAAGAGCTGACAACTaGCAAGGGGTTATCAGGCATGGAAATGAGGGCTACCTGTCCTAT +
Preference number: 1 (lower is better)
Translates to: FQQKLQSFVLGRADN*QGVIRHGNEGYLSY
Trigger: ATAGGACAGGTAGCCCTCATTTCCATGCCTGATAACCCCTTGTCAGTTGTCAGCTCTTCCCAAAACAAAGCTCTGGAGTTTCTGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp ACCCTGCTACTCACTGGGCTCAAAGTTTCCCAAACACAGAGCTTCTaGGACAGAAGAGAGAGGCTGTCTCTTCATGTCTCTTTACCCATA +
Preference number: 1 (lower is better)
Translates to: TLLLTGLKVSQTQSF*DRRERLSLHVSLPI
Trigger: TATGGGTAAAGAGACATGAAGAGACAGCCTCTCTCTTCTGTCTCAGAAGCTCTGTGTTTGGGAAACTTTGAGCCCAGTGAGTAGCAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp GAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTaGGCAGAAGTAGGAGAAAAGGATAAAATGGCCAAGCAGAGTCAG +
Preference number: 1 (lower is better)
Translates to: ETTQTLSSMAAIQVS*AEVGEKDKMAKQSQ
Trigger: CTGACTCTGCTTGGCCATTTTATCCTTTTCTCCTACTTCTGCCCAAGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 90 bp TTTTTCTCCATTATCGTCCAACTGCCTAGGCCCAATTTAATAACATaGTGCTTGTCTCCCTGGAACCGCCTGCCCACTCTATACATGGTT +
Preference number: 1 (lower is better)
Translates to: FFSIIVQLPRPNLIT*CLSPWNRLPTLYMV
Trigger: AACCATGTATAGAGTGGGCAGGCGGTTCCAGGGAGACAAGCAGCATGTTATTAAATTGGGCCTAGGCAGTTGGACGATAATGGAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp AATACCAAGAAGAATGTCCTGGAAAGGCAGACACTGTCTAGCAGCTaGTGCCTCACATTAAACACTTCCAGCAGAAACTCCAGAGCTTTG +
Preference number: 1 (lower is better)
Translates to: NTKKNVLERQTLSSS*CLTLNTSSRNSRAL
Trigger: CAAAGCTCTGGAGTTTCTGCTGGAAGTGTTTAATGTGAGGCATCAGCTGCTAGACAGTGTCTGCCTTTCCAGGACATTCTTCTTGGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 90 bp AAATGGCCAAGCAGAGTCAGAAAGTTTTCCTATAAGATCCATGCCTaGGCTTCTCTAGAGAGCAAGACTATAAAATCAGTCAGCCAGTGC +
Preference number: 1 (lower is better)
Translates to: KWPSRVRKFSYKIHA*ASLESKTIKSVSQC
Trigger: GCACTGGCTGACTGATTTTATAGTCTTGCTCTCTAGAGAAGCCCAGGCATGGATCTTATAGGAAAACTTTCTGACTCTGCTTGGCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp CTTCATTTATTTCAGAATGGCAGAACCCTAATTGACAAGCTCAAGTaGTCTGCGTATCAAAATGTGGACAGGACCAGAAGCAGGTGTAGT +
Preference number: 1 (lower is better)
Translates to: LHLFQNGRTLIDKLK*SAYQNVDRTRSRCS
Trigger: ACTACACCTGCTTCTGGTCCTGTCCACATTTTGATACGCAGATCACTTGAGCTTGTCAATTAGGGTTCTGCCATTCTGAAATAAATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 90 bp TCTGCTTTAGAAACTTCATTTATTTCAGAATGGCAGAACCCTAATTaGCAAGCTCAAGTGATCTGCGTATCAAAATGTGGACAGGACCAG +
Preference number: 1 (lower is better)
Translates to: SALETSFISEWQNPN*QAQVICVSKCGQDQ
Trigger: CTGGTCCTGTCCACATTTTGATACGCAGATCACTTGAGCTTGTCAATTAGGGTTCTGCCATTCTGAAATAAATGAAGTTTCTAAAGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGGGCCAGAGGGCATCTaGTGGGCCCCGGCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPGPEGI*WAPAAS
Trigger: ACTGGCTGCCGGGGCCCATCAGATGCCCTCTGGCCC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCCTCCTGGGGTACCCTaGTCACCAGCTCCCATCCCA +
Preference number: 2 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGPPGVP*SPAPIP
Trigger: TGGGATGGGAGCTGGTGACCAGGGTACCCCAGGAGG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGCTGGGCGTGGCCACTaGGTGGAGGGGGAACCCCAG +
Preference number: 2 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMAGRGH*VEGEPQ
Trigger: CTGGGGTTCCCCCTCCACCCAGTGGCCACGCCCAGC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCATAGGGTGCTGGGCGTaGCCACTGGGTGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPIGCWA*PLGGGG
Trigger: TCCCCCTCCACCCAGTGGCCACGCCCAGCACCCTAT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTACAGTCTGCACCATATaGCCCAGAGGGAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGTVCTI*PRGSQA
Trigger: AGCCTGGCTCCCTCTGGGTCATATGGTGCAGACTGT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAATAGGGTGCTGGGCGTaGCCACTGGGTGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPIGCWA*PLGGGG
Trigger: TCCCCCTCCACCCAGTGGCCACGCCCAGCACCCTAT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGGGCCTCCTCTCTGCTaGAAACGCAGGAAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPGPPLC*KRRKAL
Trigger: CAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGGAAGGGGCCAAGTGTaGCTCAGGAAGGGGCCTAAG +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPGRGQV*LRKGPK
Trigger: CTTAGGCCCCTTCCTGAGGCACACTTGGCCCCTTCC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGGACTGCCTGCCTGGTaGTGGTCACAGTCTGCACCA +
Preference number: 2 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSGLPAW*WSQSAP
Trigger: TGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTACCGTCGGGGCTGCCTaGACAAAGCCGGCAGATGCC +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTTVGAA*TKPADA
Trigger: GGCATCTGCCGGCTTTGTGCAGGCAGCCCCGACGGT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGATAGGGTGCTGGGCGTaGCCACTGGGTGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMIGCWA*PLGGGG
Trigger: TCCCCCTCCACCCAGTGGCCACGCCCAGCACCCTAT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTGCCATTCTGCCCACTaGGCGCTGTCGGCACATCAT +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPCHSAH*ALSAHH
Trigger: ATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCCATCCCACAGCTTGTaGGGGGCTGGATTCTCATCC +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPPSHSL*GAGFSS
Trigger: GGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGGGCCAGAGGGCATCTaGTGGGCCCCGGCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEGPEGI*WAPAAS
Trigger: ACTGGCTGCCGGGGCCCATCAGATGCCCTCTGGCCC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGGCAGTGGCAGCATTTaGAGCCCCCACTGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMGSGSI*SPHCGP
Trigger: TGGCCCACAGTGGGGGCTGCAAATGCTGCCACTGCC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGGAAACCGTCGGGGCTaGCTGCACAAAGCCGGCAGA +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTGNRRG*LHKAGR
Trigger: TCTGCCGGCTTTGTGCAGGCAGCCCCGACGGTTTCC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGGCGTGGCCACTGGGTaGAGGGGGAACCCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSGVATG*RGNPSR
Trigger: TCTGCTGGGGTTCCCCCTCCACCCAGTGGCCACGCC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCACAGGACTGCCTGCCTaGTGCTGGTCACAGTCTGCA +
Preference number: 2 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSTGLPA*CWSQSA
Trigger: TGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGT...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGCAGACAGCCCTGCCTaGTGTGTAAACACCGCACCA +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPADSPA*CVNTAP
Trigger: TGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCTGCTGAGTGTGCCATaGGCCAGAGGGCATCTGATG +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPLLSVP*ARGHLM
Trigger: CATCAGATGCCCTCTGGCCCATGGCACACTCAGCAG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGTAGTCGGCTGGGATaGGCTGTCCCAGGCTGGCCG +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSCSRLG*AVPGWP
Trigger: CGGCCAGCCTGGGACAGCTCATCCCAGCCGACTACA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGGGCCTCCTCTCTGCTaGAAACGCAGGAAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLGPPLC*KRRKAL
Trigger: CAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGTGGGGCCTCCTCTCTaGTGCAAACGCAGGAAGGCT +
Preference number: 2 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMVGPPL*CKRRKA
Trigger: AGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCCCAC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCAGCTCCCATCCCACTaGTCTTTCAGACTCTACTTC +
Preference number: 2 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGQLPSH*SFRLYF
Trigger: GAAGTAGAGTCTGAAAGAGCAGTGGGATGGGAGCTG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGCTGTCGGCACATCATaGCTCCTGGGGTACCCTGGT +
Preference number: 2 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLAVGTS*LLGYPG
Trigger: ACCAGGGTACCCCAGGAGGCATGATGTGCCGACAGC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGCTGTCGGCACATCATaGCTCCTGGGGTACCCTGGT +
Preference number: 2 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSAVGTS*LLGYPG
Trigger: ACCAGGGTACCCCAGGAGGCATGATGTGCCGACAGC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGGAAGGGGCCAAGTGTaGCTCAGGAAGGGGCCTAAG +
Preference number: 2 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLGRGQV*LRKGPK
Trigger: CTTAGGCCCCTTCCTGAGGCACACTTGGCCCCTTCC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCCAGCACTGGGTTTGTaGCTTCTGCTGAGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPPALGL*LLLSVP
Trigger: TGGCACACTCAGCAGAAGGCACAAACCCAGTGCTGG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAAATGGCCAGAGGCAGTaGCAGCATTTGCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPNGQRQ*QHLQPP
Trigger: TGGGGGCTGCAAATGCTGCCACTGCCTCTGGCCATT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCCATCAATAGGGTGCTaGGCGTGGCCACTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMPSIGC*AWPLGG
Trigger: TCCACCCAGTGGCCACGCCCAGCACCCTATTGATGG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCCATCAATAGGGTGCTaGGCGTGGCCACTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLPSIGC*AWPLGG
Trigger: TCCACCCAGTGGCCACGCCCAGCACCCTATTGATGG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCAATGTGAGATGTGCCTaGAAGGAAGGGGTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPNVRCA*KEGVAP
Trigger: TGGGGCCACCCCTTCCTTCCAGGCACATCTCACATT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCAGTCAGTGGGCGTGCTaGTCAGTAAGGCTGTGCCTT +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPSQWAC*SVRLCL
Trigger: AAGGCACAGCCTTACTGACCAGCACGCCCACTGACT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACAGGCTGGCCGGAGCTaGCGCTCGCTGTGGAAACCG +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQQAGRS*RSLWKP
Trigger: CGGTTTCCACAGCGAGCGCCAGCTCCGGCCAGCCTG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTTTGGGAGGCCCAGGTaGGAGAACTGCTTGAGCTCA +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPFGRPR*ENCLSS
Trigger: TGAGCTCAAGCAGTTCTCCCACCTGGGCCTCCCAAA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGACAGTCTGCACCATATaGCCCAGAGGGAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLTVCTI*PRGSQA
Trigger: AGCCTGGCTCCCTCTGGGTCATATGGTGCAGACTGT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCACAGTCTGCACCATATaGCCCAGAGGGAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSTVCTI*PRGSQA
Trigger: AGCCTGGCTCCCTCTGGGTCATATGGTGCAGACTGT...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGGAGGGAGGCCTGTCTaGTACAGAGGATGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTGGRPV*YRGWCC
Trigger: ACAGCACCATCCTCTGTAGCAGACAGGCCTCCCTCC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGGAAACCGTCGGGGCTaGCTGCACAAAGCCGGCAGA +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSGNRRG*LHKAGR
Trigger: TCTGCCGGCTTTGTGCAGGCAGCCCCGACGGTTTCC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCAATGGCCAGAGGCAGTaGCAGCATTTGCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSNGQRQ*QHLQPP
Trigger: TGGGGGCTGCAAATGCTGCCACTGCCTCTGGCCATT...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGCTGGGCGTGGCCACTaGGTGGAGGGGGAACCCCAG +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSAGRGH*VEGEPQ
Trigger: CTGGGGTTCCCCCTCCACCCAGTGGCCACGCCCAGC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGACAGGACTGCCTGCCTaGTGCTGGTCACAGTCTGCA +
Preference number: 2 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLTGLPA*CWSQSA
Trigger: TGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCCATCTCTGCCAGTGTaGGATCCAACCAGGCACTCC +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTPSLPV*DPTRHS
Trigger: GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGCAGATGCCAGTCAGTaGGCGTGCTGGTCAGTAAGG +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTADASQ*ACWSVR
Trigger: CCTTACTGACCAGCACGCCCACTGACTGGCATCTGC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTACACTGTCTAGCAGCTaGTGCCTCACATTAAACACT +
Preference number: 2 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGTLSSS*CLTLNT
Trigger: AGTGTTTAATGTGAGGCATCAGCTGCTAGACAGTGT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGGGCCTCCTCTCTGCTaGAAACGCAGGAAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILGPPLC*KRRKAL
Trigger: CAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGGACTGCCTGCCTGGTaGTGGTCACAGTCTGCACCA +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSGLPAW*WSQSAP
Trigger: TGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAACGGGCAGTCACGGCTaGTCCTCCACACGCAGACAG +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQTGSHG*SSTRRQ
Trigger: CTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCCCGT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGACGGGCAGTCACGGCTaGTCCTCCACACGCAGACAG +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAETGSHG*SSTRRQ
Trigger: CTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCCCGT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGGCGTGGCCACTGGGTaGAGGGGGAACCCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSGVATG*RGNPSR
Trigger: TCTGCTGGGGTTCCCCCTCCACCCAGTGGCCACGCC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGGCGTGGCCACTGGGTaGAGGGGGAACCCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGGVATG*RGNPSR
Trigger: TCTGCTGGGGTTCCCCCTCCACCCAGTGGCCACGCC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCTGCCTGCCTGGTGCTaGTCACAGTCTGCACCATAT +
Preference number: 2 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLLPAWC*SQSAPY
Trigger: ATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCAGGCTGGCCGGAGCTaGCGCTCGCTGTGGAAACCG +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSQAGRS*RSLWKP
Trigger: CGGTTTCCACAGCGAGCGCCAGCTCCGGCCAGCCTG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCTTCAGACTCTACTTCTaGAGCCACATGTCACTTGGG +
Preference number: 2 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSFRLYF*SHMSLG
Trigger: CCCAAGTGACATGTGGCTTCAGAAGTAGAGTCTGAA...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGCGCTTCAAGCAGGGTaGGACCTGACCATGTGGGAG +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQALQAG*DLTMWE
Trigger: CTCCCACATGGTCAGGTCTCACCCTGCTTGAAGCGC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTCAGTTTTTGGCTTCTaGGGCCGACTCTGCTTTAGA +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPSVFGF*GRLCFR
Trigger: TCTAAAGCAGAGTCGGCCTCAGAAGCCAAAAACTGA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGGTGCTAAGCTAAGATaGTCACCACTCAGGACAGCC +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTGAKLR*SPLRTA
Trigger: GGCTGTCCTGAGTGGTGAGCATCTTAGCTTAGCACC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGGAAGGGGCCAAGTGTaGCTCAGGAAGGGGCCTAAG +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEGRGQV*LRKGPK
Trigger: CTTAGGCCCCTTCCTGAGGCACACTTGGCCCCTTCC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCACAAAGCCGGCAGATaGCAGTCAGTGGGCGTGCTG +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEHKAGR*QSVGVL
Trigger: CAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCCATCAATAGGGTGCTaGGCGTGGCCACTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEPSIGC*AWPLGG
Trigger: TCCACCCAGTGGCCACGCCCAGCACCCTATTGATGG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGCAGACAGCCCTGCCTaGTGTGTAAACACCGCACCA +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSADSPA*CVNTAP
Trigger: TGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGCAGGTGTAGTCGGCTaGGATGAGCTGTCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQAGVVG*DELSQA
Trigger: AGCCTGGGACAGCTCATCCCAGCCGACTACACCTGC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGGTGCTGTTGGTGTTaGGGGCTCAGATGCTGTTGG +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSWCCWC*GLRCCW
Trigger: CCAACAGCATCTGAGCCCTCAACACCAACAGCACCA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGCCATTCTGCCCACTaGGCGCTGTCGGCACATCAT +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQCHSAH*ALSAHH
Trigger: ATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGGAAGAGCTGACAACTaGCAAGGGGTTATCAGGCAT +
Preference number: 2 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMGRADN*QGVIRH
Trigger: ATGCCTGATAACCCCTTGTCAGTTGTCAGCTCTTCC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTACTCCAAAGGATCACTaGCCTGCAATAAGTGTGGCG +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTTPKDH*PAISVA
Trigger: CGCCACACTTATTGCAGGTCAGTGATCCTTTGGAGT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCTGTACATGGCAATGTaGGATGTGCCTGGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSLYMAM*DVPGRK
Trigger: CTTCCTTCCAGGCACATCTCACATTGCCATGTACAG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGGAGGGAGGCCTGTCTaGTACAGAGGATGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEGGRPV*YRGWCC
Trigger: ACAGCACCATCCTCTGTAGCAGACAGGCCTCCCTCC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCAGCTCCCATCCCACTaGTCTTTCAGACTCTACTTC +
Preference number: 2 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLQLPSH*SFRLYF
Trigger: GAAGTAGAGTCTGAAAGAGCAGTGGGATGGGAGCTG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGGCAGTGGCAGCATTTaGAGCCCCCACTGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGGSGSI*SPHCGP
Trigger: TGGCCCACAGTGGGGGCTGCAAATGCTGCCACTGCC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTGCCATTTTGCCACCTaGAGATCAAGAGCTCTCCCA +
Preference number: 2 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSCHFAT*RSRALP
Trigger: TGGGAGAGCTCTTGATCTGCAGGTGGCAAAATGGCA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTATTCAGTGCCATTTTaGCACCTGCAGATCAAGAGC +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPYSVPF*HLQIKS
Trigger: GCTCTTGATCTGCAGGTGGCAAAATGGCACTGAATA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGTGGGTTTTCTCTGCTaGCAAGGGGATATTCAGTGC +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTVGFLC*QGDIQC
Trigger: GCACTGAATATCCCCTTGGCAGCAGAGAAAACCCAC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAAATCAGTCAGCCAGTaGGGAGCCCACTCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSKSVSQ*GAHSEQ
Trigger: CTGCTCTGAGTGGGCTCCGCACTGGCTGACTGATTT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGGGCTCAGATGCTGTTaGTTCTATGAGAACAACGAA +
Preference number: 2 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPGLRCC*FYENNE
Trigger: TTCGTTGTTCTCATAGAACCAACAGCATCTGAGCCC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAATGGCCAGAGGCAGTaGCAGCATTTGCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAENGQRQ*QHLQPP
Trigger: TGGGGGCTGCAAATGCTGCCACTGCCTCTGGCCATT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATCAAGCCACACAAGGTaGCAGACAGCCCTGCCTGGT +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQSSHTR*QTALPG
Trigger: ACCAGGCAGGGCTGTCTGCCACCTTGTGTGGCTTGA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTCCTGCCTCTGTACATaGCAATGTGAGATGTGCCTG +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTSCLCT*QCEMCL
Trigger: CAGGCACATCTCACATTGCCATGTACAGAGGCAGGA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGCAGATGCCAGTCAGTaGGCGTGCTGGTCAGTAAGG +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEADASQ*ACWSVR
Trigger: CCTTACTGACCAGCACGCCCACTGACTGGCATCTGC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCTTCTGGTCAGTTTTTaGCTTCTGAGGCCGACTCTG +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTLLVSF*LLRPTL
Trigger: CAGAGTCGGCCTCAGAAGCCAAAAACTGACCAGAAG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACTACTTGGGAAGCTGTaGCAGGAGGATTGCGTGAGC +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSLLGKL*QEDCVS
Trigger: GCTCACGCAATCCTCCTGCCACAGCTTCCCAAGTAG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATTTGGGAGGCCCAGGTaGGAGAACTGCTTGAGCTCA +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSFGRPR*ENCLSS
Trigger: TGAGCTCAAGCAGTTCTCCCACCTGGGCCTCCCAAA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CAA 90 bp CCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTaGGCACCAATGCCCTGTAAGCATGTGCCACTCTACGATCTTTCA +
Preference number: 2 (lower is better)
Translates to: PHPTACEGLDSHPLD*APMPCKHVPLYDLS
Trigger: TGAAAGATCGTAGAGTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CAA 90 bp CACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTCTTTCTaGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTGTGCC +
Preference number: 2 (lower is better)
Translates to: HSEQTVNSGRAFPSF*MRTSTGFVPSAECA
Trigger: GGCACACTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCATCTGTTTTCTAGGTaGGACTGTGTTGGTTGGTGC +
Preference number: 2 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMHLFSR*DCVGWC
Trigger: GCACCAACCAACACAGTCTCACCTAGAAAACAGATG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTTCAGACTCTACTTCTaGAGCCACATGTCACTTGGG +
Preference number: 2 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLFRLYF*SHMSLG
Trigger: CCCAAGTGACATGTGGCTTCAGAAGTAGAGTCTGAA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAACACTGTCTAGCAGCTaGTGCCTCACATTAAACACT +
Preference number: 2 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPTLSSS*CLTLNT
Trigger: AGTGTTTAATGTGAGGCATCAGCTGCTAGACAGTGT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGCGCTTCAAGCAGGGTaGGACCTGACCATGTGGGAG +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGALQAG*DLTMWE
Trigger: CTCCCACATGGTCAGGTCTCACCCTGCTTGAAGCGC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTCAGTTTTTGGCTTCTaGGGCCGACTCTGCTTTAGA +
Preference number: 2 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSSVFGF*GRLCFR
Trigger: TCTAAAGCAGAGTCGGCCTCAGAAGCCAAAAACTGA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGTGGGGCCTCCTCTCTaGTGCAAACGCAGGAAGGCT +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGVGPPL*CKRRKA
Trigger: AGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCCCAC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGGTGCTAAGCTAAGATaGTCACCACTCAGGACAGCC +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSGAKLR*SPLRTA
Trigger: GGCTGTCCTGAGTGGTGAGCATCTTAGCTTAGCACC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGCTGTCGGCACATCATaGCTCCTGGGGTACCCTGGT +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGAVGTS*LLGYPG
Trigger: ACCAGGGTACCCCAGGAGGCATGATGTGCCGACAGC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGGGTGGCCCCATCTCTaGCAGTGTGGGATCCAACCA +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSGWPHL*QCGIQP
Trigger: TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCACCAAACGTGACTCCTaGCTCTGTACATGGCAATGT +
Preference number: 2 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSTKRDS*LCTWQC
Trigger: ACATTGCCATGTACAGAGGCAGGAGTCACGTTTGGT...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACCCTCTCACTTTAAATaGCCAGAGGCAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSPSHFK*PEAVAA
Trigger: TGCTGCCACTGCCTCTGGCCATTTAAAGTGAGAGGG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCCCCGAATTGTCTGTTaGTGCCCCTCTCACTTTAAA +
Preference number: 2 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSPRIVC*CPSHFK
Trigger: TTTAAAGTGAGAGGGGCACCAACAGACAATTCGGGG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCCCCGAATTGTCTGTTaGTGCCCCTCTCACTTTAAA +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTPRIVC*CPSHFK
Trigger: TTTAAAGTGAGAGGGGCACCAACAGACAATTCGGGG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTTTGGGAGGCCCAGGTaGGAGAACTGCTTGAGCTCA +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEFGRPR*ENCLSS
Trigger: TGAGCTCAAGCAGTTCTCCCACCTGGGCCTCCCAAA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGGAAGCGAGCGATGTaGACTCAGGAGACCACACAA +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSWKRAM*TQETTQ
Trigger: TTGTGTGGTCTCCTGAGTCCACATCGCTCGCTTCCA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGGAAGAGCTGACAACTaGCAAGGGGTTATCAGGCAT +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSGRADN*QGVIRH
Trigger: ATGCCTGATAACCCCTTGTCAGTTGTCAGCTCTTCC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTGTTTTGGGAAGAGCTaGCAACTGACAAGGGGTTAT +
Preference number: 2 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSCFGKS*QLTRGY
Trigger: ATAACCCCTTGTCAGTTGTCAGCTCTTCCCAAAACA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCCATCCCACAGCTTGTaGGGGGCTGGATTCTCATCC +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGPSHSL*GAGFSS
Trigger: GGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGGAGGGAGGCCTGTCTaGTACAGAGGATGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSGGRPV*YRGWCC
Trigger: ACAGCACCATCCTCTGTAGCAGACAGGCCTCCCTCC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAAAGGATCACTGACCTaGAATAAGTGTGGCGGCCTG +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSKGSLT*NKCGGL
Trigger: CAGGCCGCCACACTTATTGCAGGTCAGTGATCCTTT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGCCATTTTGCCACCTaGAGATCAAGAGCTCTCCCA +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSCHFAT*RSRALP
Trigger: TGGGAGAGCTCTTGATCTGCAGGTGGCAAAATGGCA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGGGCTCAGATGCTGTTaGTTCTATGAGAACAACGAA +
Preference number: 2 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSGLRCC*FYENNE
Trigger: TTCGTTGTTCTCATAGAACCAACAGCATCTGAGCCC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCCAAGAAGAATGTCCTaGAAAGGCAGACACTGTCTA +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTPRRMS*KGRHCL
Trigger: TAGACAGTGTCTGCCTTTCCAGGACATTCTTCTTGG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACTTCTGGTCAGTTTTTaGCTTCTGAGGCCGACTCTG +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSLLVSF*LLRPTL
Trigger: CAGAGTCGGCCTCAGAAGCCAAAAACTGACCAGAAG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACTCATCCACTGGACTTaGCACCAATGCCCTGTAAGC +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQLIHWT*HQCPVS
Trigger: GCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCTCATCCACTGGACTTaGCACCAATGCCCTGTAAGC +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAELIHWT*HQCPVS
Trigger: GCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGGATTCTCATCCACTaGACTTGGCACCAATGCCCT +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSWILIH*TWHQCP
Trigger: AGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGTGGTCCCAGCTACTTaGGAAGCTGTGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSVVPAT*EAVAGG
Trigger: TCCTCCTGCCACAGCTTCCCAAGTAGCTGGGACCAC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGGTCCCTGCCCCTCTaGTTCCAGGTTCTGCTCATG +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGWSLPL*FQVLLM
Trigger: CATGAGCAGAACCTGGAACCAGAGGGGCAGGGACCA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGCATCTGTTTTCTAGGTaGGACTGTGTTGGTTGGTGC +
Preference number: 2 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILHLFSR*DCVGWC
Trigger: GCACCAACCAACACAGTCTCACCTAGAAAACAGATG...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGGAAGAGCTGACAACTaGCAAGGGGTTATCAGGCAT +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEGRADN*QGVIRH
Trigger: ATGCCTGATAACCCCTTGTCAGTTGTCAGCTCTTCC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAACTCCAAAGGATCACTaGCCTGCAATAAGTGTGGCG +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQTPKDH*PAISVA
Trigger: CGCCACACTTATTGCAGGTCAGTGATCCTTTGGAGT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTCACCACCTGGGCCATaGGCTCTGGGAGCAGAGGTC +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQSPPGP*ALGAEV
Trigger: GACCTCTGCTCCCAGAGCTCATGGCCCAGGTGGTGA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCAGCTTCCAGGCACGTaGGGTTTAAACACACACCCG +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGQLPGT*GLNTHP
Trigger: CGGGTGTGTGTTTAAACCTCACGTGCCTGGAAGCTG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCAAGCTCAAGTGATCTaGGTATCAAAATGTGGACAG +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTQAQVI*VSKCGQ
Trigger: CTGTCCACATTTTGATACGCAGATCACTTGAGCTTG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCCAGCACTGGGTTTGTaGCTTCTGCTGAGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSPALGL*LLLSVP
Trigger: TGGCACACTCAGCAGAAGGCACAAACCCAGTGCTGG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCCTCCTGGGGTACCCTaGTCACCAGCTCCCATCCCA +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQPPGVP*SPAPIP
Trigger: TGGGATGGGAGCTGGTGACCAGGGTACCCCAGGAGG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCTGCCTGCCTGGTGCTaGTCACAGTCTGCACCATAT +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSLPAWC*SQSAPY
Trigger: ATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAATGTGAGATGTGCCTaGAAGGAAGGGGTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGNVRCA*KEGVAP
Trigger: TGGGGCCACCCCTTCCTTCCAGGCACATCTCACATT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAGTCAGTGGGCGTGCTaGTCAGTAAGGCTGTGCCTT +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGSQWAC*SVRLCL
Trigger: AAGGCACAGCCTTACTGACCAGCACGCCCACTGACT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACTGCGTATCAAAATGTaGACAGGACCAGAAGCAGGT +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSLRIKM*TGPEAG
Trigger: ACCTGCTTCTGGTCCTGTCCACATTTTGATACGCAG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTAGAGATTTCAGCCTTTaGTTAAAGGAAGGGGATGAA +
Preference number: 2 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTRDFSL*LKEGDE
Trigger: TTCATCCCCTTCCTTTAATCAAAGGCTGAAATCTCT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCATGGTGACCAAACGTaGCTCCTGCCTCTGTACATG +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGHGDQT*LLPLYM
Trigger: CATGTACAGAGGCAGGAGTCACGTTTGGTCACCATG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCATGGTGACCAAACGTaGCTCCTGCCTCTGTACATG +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSHGDQT*LLPLYM
Trigger: CATGTACAGAGGCAGGAGTCACGTTTGGTCACCATG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTGGCAGAACCCTAATTaGCAAGCTCAAGTGATCTGC +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEWQNPN*QAQVIC
Trigger: GCAGATCACTTGAGCTTGTCAATTAGGGTTCTGCCA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGAAGTCTTAAAGGTTTaGGCACCATCTTCTGGTCAG +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSEVLKV*APSSGQ
Trigger: CTGACCAGAAGATGGTGCTCAAACCTTTAAGACTTC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACCCTTCACATGGAGATaGAGTCTTAAAGGTTTGAGC +
Preference number: 2 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSPFTWR*SLKGLS
Trigger: GCTCAAACCTTTAAGACTTCATCTCCATGTGAAGGG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGTCTTCAGCTTGTGGTaGCCACGTCACCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQVFSLW*PRHQPP
Trigger: TGGGGGCTGGTGACGTGGTCACCACAAGCTGAAGAC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGCAGACAGGACTGCCTaGCTGGTGCTGGTCACAGTC +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQADRTA*LVLVTV
Trigger: GACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGACACGCAGACAGGACTaGCTGCCTGGTGCTGGTCAC +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQTRRQD*LPGAGH
Trigger: GTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCTGTGGCAGGAGGATTaGGTGAGCCCGCAGAGGTTG +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQLWQED*VSPQRL
Trigger: CAACCTCTGCGGGCTCACGCAATCCTCCTGCCACAG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACTCGGCACAGTAAGCTaGAAATCTGGTGATTCCGAA +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQLGTVS*KSGDSE
Trigger: TTCGGAATCACCAGATTTGCAGCTTACTGTGCCGAG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTCACACTGCAGACCCTaGTACTCACTGGGCTCAAAG +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGSHCRP*YSLGSK
Trigger: CTTTGAGCCCAGTGAGTAGCAGGGTCTGCAGTGTGA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCTTCCCTCCCTCCTTTaGTCAATGTGCAGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGLPSLL*SMCSFQ
Trigger: CTGGAAGCTGCACATTGACCAAAGGAGGGAGGGAAG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCCATCCCACAGCTTGTaGGGGGCTGGATTCTCATCC +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQPSHSL*GAGFSS
Trigger: GGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGTTTGTGCCTTCTGCTaGGTGTGCCATGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQVCAFC*VCHGPE
Trigger: CTCTGGCCCATGGCACACTCAGCAGAAGGCACAAAC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGTGGGTTTTCTCTGCTaGCAAGGGGATATTCAGTGC +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSVGFLC*QGDIQC
Trigger: GCACTGAATATCCCCTTGGCAGCAGAGAAAACCCAC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGTGGGTTTTCTCTGCTaGCAAGGGGATATTCAGTGC +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGVGFLC*QGDIQC
Trigger: GCACTGAATATCCCCTTGGCAGCAGAGAAAACCCAC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGGGCTCAGATGCTGTTaGTTCTATGAGAACAACGAA +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEGLRCC*FYENNE
Trigger: TTCGTTGTTCTCATAGAACCAACAGCATCTGAGCCC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACAGGCTGGCCGGAGCTaGCGCTCGCTGTGGAAACCG +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRQAGRS*RSLWKP
Trigger: CGGTTTCCACAGCGAGCGCCAGCTCCGGCCAGCCTG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGTCTTGTCACAATCTaGGTCTCCAACAGAAACCTG +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQCLVTI*VSNRNL
Trigger: CAGGTTTCTGTTGGAGACCCAGATTGTGACAAGACA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGAACACCGGGACCCCATaGAAGCGAGCGATGTGGACT +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQNTGTP*KRAMWT
Trigger: AGTCCACATCGCTCGCTTCCATGGGGTCCCGGTGTT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CAA 90 bp TCCATTATCGTCCAACTGCCTAGGCCCAATTTAATAACATGCTGCTaGTCTCCCTGGAACCGCCTGCCCACTCTATACATGGTTAGCACT +
Preference number: 2 (lower is better)
Translates to: SIIVQLPRPNLITCC*SPWNRLPTLYMVST
Trigger: AGTGCTAACCATGTATAGAGTGGGCAGGCGGTTCCAGGGAGACAAGCAGCATGTTATTAAATTGGGCCTAGGCAGTTGGACGATAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGGTGCTGTTGGTGTTaGGGGCTCAGATGCTGTTGG +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQWCCWC*GLRCCW
Trigger: CCAACAGCATCTGAGCCCTCAACACCAACAGCACCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTGGCAGAACCCTAATTaGCAAGCTCAAGTGATCTGC +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSWQNPN*QAQVIC
Trigger: GCAGATCACTTGAGCTTGTCAATTAGGGTTCTGCCA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGAATTTCTCAGTGCTTaGAAGGATCTGACACTGGAA +
Preference number: 2 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEEFLSA*KDLTLE
Trigger: TTCCAGTGTCAGATCCTTTCAAGCACTGAGAAATTC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCTCGGCACAGTAAGCTaGAAATCTGGTGATTCCGAA +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGLGTVS*KSGDSE
Trigger: TTCGGAATCACCAGATTTGCAGCTTACTGTGCCGAG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCCCCGAATTGTCTGTTaGTGCCCCTCTCACTTTAAA +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSPRIVC*CPSHFK
Trigger: TTTAAAGTGAGAGGGGCACCAACAGACAATTCGGGG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CAA 90 bp TATGAGAACAACGAAGCTTCCATCTGTTTTCTAGGTGAGACTGTGTaGGTTGGTGCTAAGCTAAGATGCTCACCACTCAGGACAGCCAGG +
Preference number: 2 (lower is better)
Translates to: YENNEASICFLGETV*VGAKLRCSPLRTAR
Trigger: CCTGGCTGTCCTGAGTGGTGAGCATCTTAGCTTAGCACCAACCAACACAGTCTCACCTAGAAAACAGATGGAAGCTTCGTTGTTCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCATGGTGACCAAACGTaGCTCCTGCCTCTGTACATG +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQHGDQT*LLPLYM
Trigger: CATGTACAGAGGCAGGAGTCACGTTTGGTCACCATG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAATTGACAAGCTCAAGTaGTCTGCGTATCAAAATGTG +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQIDKLK*SAYQNV
Trigger: CACATTTTGATACGCAGATCACTTGAGCTTGTCAAT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCCCTTCACATGGAGATaGAGTCTTAAAGGTTTGAGC +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSPFTWR*SLKGLS
Trigger: GCTCAAACCTTTAAGACTTCATCTCCATGTGAAGGG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGGCAGTGGCAGCATTTaGAGCCCCCACTGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRGSGSI*SPHCGP
Trigger: TGGCCCACAGTGGGGGCTGCAAATGCTGCCACTGCC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTATTCAGTGCCATTTTaGCACCTGCAGATCAAGAGC +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGYSVPF*HLQIKS
Trigger: GCTCTTGATCTGCAGGTGGCAAAATGGCACTGAATA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCTCCCTGGAACCGCCTaGCCACTCTATACATGGTTA +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQLPGTA*PLYTWL
Trigger: TAACCATGTATAGAGTGGGCAGGCGGTTCCAGGGAG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCCAAGAAGAATGTCCTaGAAAGGCAGACACTGTCTA +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSPRRMS*KGRHCL
Trigger: TAGACAGTGTCTGCCTTTCCAGGACATTCTTCTTGG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCCAAGAAGAATGTCCTaGAAAGGCAGACACTGTCTA +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGPRRMS*KGRHCL
Trigger: TAGACAGTGTCTGCCTTTCCAGGACATTCTTCTTGG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGTCTTGTCACAATCTaGGTCTCCAACAGAAACCTG +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGCLVTI*VSNRNL
Trigger: CAGGTTTCTGTTGGAGACCCAGATTGTGACAAGACA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTATAAGATCCATGCCTaGGCTTCTCTAGAGAGCAAG +
Preference number: 2 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSYKIHA*ASLESK
Trigger: CTTGCTCTCTAGAGAAGCCCAGGCATGGATCTTATA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGGAAGCGAGCGATGTaGACTCAGGAGACCACACAA +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQWKRAM*TQETTQ
Trigger: TTGTGTGGTCTCCTGAGTCCACATCGCTCGCTTCCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTTCTGCTCATGCGCGTaGACAGTAGGAGTCTCACCT +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQFCSCA*TVGVSP
Trigger: AGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGATTGCCAGGGAAACCTaGTACTCACACTGCAGACCC +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQIARET*YSHCRP
Trigger: GGGTCTGCAGTGTGAGTACCAGGTTTCCCTGGCAAT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCATGCTGTTGGTTCTATaGGAACAACGAAGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGMLLVL*EQRSFH
Trigger: ATGGAAGCTTCGTTGTTCTCATAGAACCAACAGCAT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAACACGCAGACAGGACTaGCTGCCTGGTGCTGGTCAC +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRTRRQD*LPGAGH
Trigger: GTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGAAAGAATTTCTCAGTaGTTGAAAGGATCTGACACT +
Preference number: 2 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQERISQ*LKGSDT
Trigger: AGTGTCAGATCCTTTCAAGCACTGAGAAATTCTTTC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGAATCACACTCCAGCCTaGAATCTGACTGCCTTTCCC +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQNHTPA*NLTAFP
Trigger: GGGAAAGGCAGTCAGATTCCAGGCTGGAGTGTGATT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGCCCACTCTATACATaGTTAGCACTTCCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQCPLYT*LALPSL
Trigger: GAGGGAGGGAAGTGCTAACCATGTATAGAGTGGGCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCATCTGTTTTCTAGGTaGGACTGTGTTGGTTGGTGC +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQHLFSR*DCVGWC
Trigger: GCACCAACCAACACAGTCTCACCTAGAAAACAGATG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATGCCATTCTGCCCACTaGGCGCTGTCGGCACATCAT +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRCHSAH*ALSAHH
Trigger: ATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAGAGATTTCAGCCTTTaGTTAAAGGAAGGGGATGAA +
Preference number: 2 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGRDFSL*LKEGDE
Trigger: TTCATCCCCTTCCTTTAATCAAAGGCTGAAATCTCT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGACCAAACGTGACTCCTaGCTCTGTACATGGCAATGT +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQTKRDS*LCTWQC
Trigger: ACATTGCCATGTACAGAGGCAGGAGTCACGTTTGGT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGCCCTGTAAGCATGTaGCACTCTACGATCTTTCAG +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQCPVSM*HSTIFQ
Trigger: CTGAAAGATCGTAGAGTGGCACATGCTTACAGGGCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACCATCTCTGCCAGTGTaGGATCCAACCAGGCACTCC +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRPSLPV*DPTRHS
Trigger: GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGCAGATGCCAGTCAGTaGGCGTGCTGGTCAGTAAGG +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRADASQ*ACWSVR
Trigger: CCTTACTGACCAGCACGCCCACTGACTGGCATCTGC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGTTTTGGGAAGAGCTaGCAACTGACAAGGGGTTAT +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQCFGKS*QLTRGY
Trigger: ATAACCCCTTGTCAGTTGTCAGCTCTTCCCAAAACA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAAATGTGAGATGTGCCTaGAAGGAAGGGGTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRNVRCA*KEGVAP
Trigger: TGGGGCCACCCCTTCCTTCCAGGCACATCTCACATT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGATGCTGTTGGTTCTATaGGAACAACGAAGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQMLLVL*EQRSFH
Trigger: ATGGAAGCTTCGTTGTTCTCATAGAACCAACAGCAT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGGTGCTAAGCTAAGATaGTCACCACTCAGGACAGCC +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRGAKLR*SPLRTA
Trigger: GGCTGTCCTGAGTGGTGAGCATCTTAGCTTAGCACC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATGGTCAGTAAGGCTGTaGCTTCTGCGCTTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRWSVRL*LLRFKQ
Trigger: CTGCTTGAAGCGCAGAAGGCACAGCCTTACTGACCA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACAGCTTGTGAGGGGCTaGATTCTCATCCACTGGACT +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRQLVRG*ILIHWT
Trigger: AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATTCAGACTCTACTTCTaGAGCCACATGTCACTTGGG +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRFRLYF*SHMSLG
Trigger: CCCAAGTGACATGTGGCTTCAGAAGTAGAGTCTGAA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACTGCGTATCAAAATGTaGACAGGACCAGAAGCAGGT +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRLRIKM*TGPEAG
Trigger: ACCTGCTTCTGGTCCTGTCCACATTTTGATACGCAG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAACACTGTCTAGCAGCTaGTGCCTCACATTAAACACT +
Preference number: 2 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRTLSSS*CLTLNT
Trigger: AGTGTTTAATGTGAGGCATCAGCTGCTAGACAGTGT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp GGAGTGGGCGGCAGCAGAGCCACGGGCAGTCACGGCTaGTCCTCCACACGCAGACAGGACTGCCTGCCTGGT +
Preference number: 3 (lower is better)
Translates to: GVGGSRATGSHG*SSTRRQDCLPG
Trigger: ACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCCCGTGGCTCTGCTGCCGCCCACTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp GCCGGAGCTGGCGCTCGCTGTGGAAACCGTCGGGGCTaGCTGCACAAAGCCGGCAGATGCCAGTCAGTGGGC +
Preference number: 3 (lower is better)
Translates to: AGAGARCGNRRG*LHKAGRCQSVG
Trigger: GCCCACTGACTGGCATCTGCCGGCTTTGTGCAGGCAGCCCCGACGGTTTCCACAGCGAGCGCCAGCTCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp GGGGCTGCCTGCACAAAGCCGGCAGATGCCAGTCAGTaGGCGTGCTGGTCAGTAAGGCTGTGCCTTCTGCGC +
Preference number: 3 (lower is better)
Translates to: GAACTKPADASQ*ACWSVRLCLLR
Trigger: GCGCAGAAGGCACAGCCTTACTGACCAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTGCAGGCAGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp CTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATaGCTCCTGGGGTACCCTGGTCACCAGCTCCCATCC +
Preference number: 3 (lower is better)
Translates to: LPFCPLSAVGTS*LLGYPGHQLPS
Trigger: GGATGGGAGCTGGTGACCAGGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp GGAAACCGTCGGGGCTGCCTGCACAAAGCCGGCAGATaGCAGTCAGTGGGCGTGCTGGTCAGTAAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: GNRRGCLHKAGR*QSVGVLVSKAV
Trigger: CACAGCCTTACTGACCAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTGCAGGCAGCCCCGACGGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCAGAGGATGGTGCTGTaGGTGTTGAGGGCTCAGATG +
Preference number: 3 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGQRMVL*VLRAQM
Trigger: CATCTGAGCCCTCAACACCAACAGCACCATCCTCTG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTAGGCAGTGGCAGCATTaGCAGCCCCCACTGTGGGCC +
Preference number: 3 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTRQWQH*QPPLWA
Trigger: GGCCCACAGTGGGGGCTGCAAATGCTGCCACTGCCT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCAGGCAGTGGCAGCATTaGCAGCCCCCACTGTGGGCC +
Preference number: 3 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSRQWQH*QPPLWA
Trigger: GGCCCACAGTGGGGGCTGCAAATGCTGCCACTGCCT...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 72 bp ACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATaGCCCAGAGGGAGCCAGGCTGCCAGGTCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: TACLVLVTVCTI*PRGSQAARSGR
Trigger: TCTGCCTGACCTGGCAGCCTGGCTCCCTCTGGGTCATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp GAGGGCAAAGGGCAAGCTGTGGGGCCTCCTCTCTGCTaGAAACGCAGGAAGGCTCTGCCGGATGAAAGGCTG +
Preference number: 3 (lower is better)
Translates to: EGKGQAVGPPLC*KRRKALPDERL
Trigger: CAGCCTTTCATCCGGCAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCCCACAGCTTGCCCTTTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp CTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTaGTCACAGTCTGCACCATATGACCCAGAGGGAGCC +
Preference number: 3 (lower is better)
Translates to: LLHTQTGLPAWC*SQSAPYDPEGA
Trigger: GGCTCCCTCTGGGTCATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp ATGGAGGGCAAAGGGCAAGCTGTGGGGCCTCCTCTCTaGTGCAAACGCAGGAAGGCTCTGCCGGATGAAAGG +
Preference number: 3 (lower is better)
Translates to: MEGKGQAVGPPL*CKRRKALPDER
Trigger: CCTTTCATCCGGCAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCCCACAGCTTGCCCTTTGCCCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp GCCTGCACAAAGCCGGCAGATGCCAGTCAGTGGGCGTaGTGGTCAGTAAGGCTGTGCCTTCTGCGCTTCAAG +
Preference number: 3 (lower is better)
Translates to: ACTKPADASQWA*WSVRLCLLRFK
Trigger: CTTGAAGCGCAGAAGGCACAGCCTTACTGACCAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp GAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTaGTCACCAGCTCCCATCCCACTGCTCTTTCAGACT +
Preference number: 3 (lower is better)
Translates to: ERCRHIMPPGVP*SPAPIPLLFQT
Trigger: AGTCTGAAAGAGCAGTGGGATGGGAGCTGGTGACCAGGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 72 bp GGGCCAAGTCCCATATCTAACTGCCATTCTGCCCACTaGGCGCTGTCGGCACATCATGCCTCCTGGGGTACC +
Preference number: 3 (lower is better)
Translates to: GPSPISNCHSAH*ALSAHHASWGT
Trigger: GGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGTTAGATATGGGACTTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 72 bp TGGATGTACCCAGGCTGGACACCAAAGCCTGTGCTCTaGAACCCTGCCCCACACTTGCTCCCTGGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: WMYPGWTPKPVL*NPAPHLLPGKE
Trigger: CTCCTTCCCAGGGAGCAAGTGTGGGGCAGGGTTTCAGAGCACAGGCTTTGGTGTCCAGCCTGGGTACATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp ACAGGGGGTCAAGCCACACAAGGTGGCAGACAGCCCTaGCTGGTGTGTAAACACCGCACCAGCAGACTCCAA +
Preference number: 3 (lower is better)
Translates to: TGGQATQGGRQP*LVCKHRTSRLQ
Trigger: TTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCCACCTTGTGTGGCTTGACCCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp ACAGCTGGATGTACCCAGGCTGGACACCAAAGCCTGTaGTCTGAAACCCTGCCCCACACTTGCTCCCTGGGA +
Preference number: 3 (lower is better)
Translates to: TAGCTQAGHQSL*SETLPHTCSLG
Trigger: TCCCAGGGAGCAAGTGTGGGGCAGGGTTTCAGAGCACAGGCTTTGGTGTCCAGCCTGGGTACATCCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp GGGGTCAAGCCACACAAGGTGGCAGACAGCCCTGCCTaGTGTGTAAACACCGCACCAGCAGACTCCAACCTT +
Preference number: 3 (lower is better)
Translates to: GVKPHKVADSPA*CVNTAPADSNL
Trigger: AAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCCACCTTGTGTGGCTTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp TGCACAAAGCCGGCAGATGCCAGTCAGTGGGCGTGCTaGTCAGTAAGGCTGTGCCTTCTGCGCTTCAAGCAG +
Preference number: 3 (lower is better)
Translates to: CTKPADASQWAC*SVRLCLLRFKQ
Trigger: CTGCTTGAAGCGCAGAAGGCACAGCCTTACTGACCAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp CCCTGCCCCTCTGGTTCCAGGTTCTGCTCATGCGCGTaGACAGTAGGAGTCTCACCTTCCCGCAGTAATCCT +
Preference number: 3 (lower is better)
Translates to: PCPSGSRFCSCA*TVGVSPSRSNP
Trigger: AGGATTACTGCGGGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAGGCAGTGGCAGCATTaGCAGCCCCCACTGTGGGCC +
Preference number: 3 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAERQWQH*QPPLWA
Trigger: GGCCCACAGTGGGGGCTGCAAATGCTGCCACTGCCT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCCTAAGGTCCCCGAATaGTCTGTTGGTGCCCCTCTC +
Preference number: 3 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSPKVPE*SVGAPL
Trigger: GAGAGGGGCACCAACAGACAATTCGGGGACCTTAGG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAATGGTGCTGTTGGTGTaGAGGGCTCAGATGCTGTTG +
Preference number: 3 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPMVLLV*RAQMLL
Trigger: CAACAGCATCTGAGCCCTCAACACCAACAGCACCAT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTAGAAACTCCAGAGCTTaGTTTTGGGAAGAGCTGACA +
Preference number: 3 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGRNSRA*FWEELT
Trigger: TGTCAGCTCTTCCCAAAACAAAGCTCTGGAGTTTCT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp CGTGACTCCTGCCTCTGTACATGGCAATGTGAGATGTaGCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGT +
Preference number: 3 (lower is better)
Translates to: RDSCLCTWQCEM*LEGRGGPISAS
Trigger: ACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATCTCACATTGCCATGTACAGAGGCAGGAGTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGATGGTGCTGTTGGTGTaGAGGGCTCAGATGCTGTTG +
Preference number: 3 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMMVLLV*RAQMLL
Trigger: CAACAGCATCTGAGCCCTCAACACCAACAGCACCAT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGTGGTCCCAGCTACTaGGGAAGCTGTGGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQCGPSY*GSCGRR
Trigger: CCTCCTGCCACAGCTTCCCAAGTAGCTGGGACCACA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 72 bp ATTCACTGCAACTCCCAAGCCCCATCCCACAGCTTGTaGGGGGCTGGATTCTCATCCACTGGACTTGGCACC +
Preference number: 3 (lower is better)
Translates to: IHCNSQAPSHSL*GAGFSSTGLGT
Trigger: GGTGCCAAGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAGTTGCAGTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp AGAGTTCAGTCCAGAGGCCATAAGGGCAGCAGCCTATaGGGAACGAGGCAAAAACAACACCGGGACCCCATG +
Preference number: 3 (lower is better)
Translates to: RVQSRGHKGSSL*GTRQKQHRDPM
Trigger: CATGGGGTCCCGGTGTTGTTTTTGCCTCGTTCCCCATAGGCTGCTGCCCTTATGGCCTCTGGACTGAACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACTAGGTGAGACTGTGTaGGTTGGTGCTAAGCTAAGA +
Preference number: 3 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPLGETV*VGAKLR
Trigger: TCTTAGCTTAGCACCAACCAACACAGTCTCACCTAG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGCAGAGGATGGTGCTGTaGGTGTTGAGGGCTCAGATG +
Preference number: 3 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILQRMVL*VLRAQM
Trigger: CATCTGAGCCCTCAACACCAACAGCACCATCCTCTG...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACAGAGGATGGTGCTGTaGGTGTTGAGGGCTCAGATG +
Preference number: 3 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSQRMVL*VLRAQM
Trigger: CATCTGAGCCCTCAACACCAACAGCACCATCCTCTG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTCTTCTGGTCAGTTTTaGGCTTCTGAGGCCGACTCT +
Preference number: 3 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTSSGQF*ASEADS
Trigger: AGAGTCGGCCTCAGAAGCCAAAAACTGACCAGAAGA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp ATTCCCACAGAATCACACTCCAGCCTGGAATCTGACTaGCTTTCCCTCCTCACCACCTGGGCCATGAGCTCT +
Preference number: 3 (lower is better)
Translates to: IPTESHSSLESD*LSLLTTWAMSS
Trigger: AGAGCTCATGGCCCAGGTGGTGAGGAGGGAAAGGCAGTCAGATTCCAGGCTGGAGTGTGATTCTGTGGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp GAGACCTGGATTGCCAGGGAAACCTGGTACTCACACTaGAGACCCTGCTACTCACTGGGCTCAAAGTTTCCC +
Preference number: 3 (lower is better)
Translates to: ETWIARETWYSH*RPCYSLGSKFP
Trigger: GGGAAACTTTGAGCCCAGTGAGTAGCAGGGTCTGCAGTGTGAGTACCAGGTTTCCCTGGCAATCCAGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp GCTGACATGCCTTCCGTGGTCAGTGGGAAGTCAGAATaGTTCCTCAGAGGAGACCTGGATTGCCAGGGAAAC +
Preference number: 3 (lower is better)
Translates to: ADMPSVVSGKSE*FLRGDLDCQGN
Trigger: GTTTCCCTGGCAATCCAGGTCTCCTCTGAGGAAGCATTCTGACTTCCCACTGACCACGGAAGGCATGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp CAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTaGCACCAATGCCCTGTAAGCATGTGCCACTCTACG +
Preference number: 3 (lower is better)
Translates to: QLVRGWILIHWT*HQCPVSMCHST
Trigger: CGTAGAGTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp ATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTaGACTTGGCACCAATGCCCTGTAAGCATGTGCCAC +
Preference number: 3 (lower is better)
Translates to: IPQLVRGWILIH*TWHQCPVSMCH
Trigger: GTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp ACTCTAGCCCGAGGCATGAAGCTGACATGCCTTCCGTaGTCAGTGGGAAGTCAGAATGCTTCCTCAGAGGAG +
Preference number: 3 (lower is better)
Translates to: TLARGMKLTCLP*SVGSQNASSEE
Trigger: CTCCTCTGAGGAAGCATTCTGACTTCCCACTGACCACGGAAGGCATGTCAGCTTCATGCCTCGGGCTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp GCTTGTCTCCCTGGAACCGCCTGCCCACTCTATACATaGTTAGCACTTCCCTCCCTCCTTTGGTCAATGTGC +
Preference number: 3 (lower is better)
Translates to: ACLPGTACPLYT*LALPSLLWSMC
Trigger: GCACATTGACCAAAGGAGGGAGGGAAGTGCTAACCATGTATAGAGTGGGCAGGCGGTTCCAGGGAGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp GCATCTCACACAATGTCAGTTAGACAGCGGGACAGCTaGATGTACCCAGGCTGGACACCAAAGCCTGTGCTC +
Preference number: 3 (lower is better)
Translates to: ASHTMSVRQRDS*MYPGWTPKPVL
Trigger: GAGCACAGGCTTTGGTGTCCAGCCTGGGTACATCCAGCTGTCCCGCTGTCTAACTGACATTGTGTGAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 72 bp AGGCTGTGCCTTCTGCGCTTCAAGCAGGGTGAGACCTaGCCATGTGGGAGCAATAAAAGCTTCCATGGTGAC +
Preference number: 3 (lower is better)
Translates to: RLCLLRFKQGET*PCGSNKSFHGD
Trigger: GTCACCATGGAAGCTTTTATTGCTCCCACATGGTCAGGTCTCACCCTGCTTGAAGCGCAGAAGGCACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp CTAGGTGAGACTGTGTTGGTTGGTGCTAAGCTAAGATaGTCACCACTCAGGACAGCCAGGGATGGAGGGCAA +
Preference number: 3 (lower is better)
Translates to: LGETVLVGAKLR*SPLRTARDGGQ
Trigger: TTGCCCTCCATCCCTGGCTGTCCTGAGTGGTGAGCATCTTAGCTTAGCACCAACCAACACAGTCTCACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp CTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTaGGGTGCTGAACTCACCCTTGGGGAGGACTCATTA +
Preference number: 3 (lower is better)
Translates to: LPSITGIQAEQG*GAELTLGEDSL
Trigger: TAATGAGTCCTCCCCAAGGGTGAGTTCAGCACCCCAGCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATCTCATCCACTGGACTaGGCACCAATGCCCTGTAAG +
Preference number: 3 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQSHPLD*APMPCK
Trigger: CTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp CACAGTCTGCACCATATGACCCAGAGGGAGCCAGGCTaGCAGGTCAGGCAGAGATTTCAGCCTTTGATTAAA +
Preference number: 3 (lower is better)
Translates to: HSLHHMTQREPG*QVRQRFQPLIK
Trigger: TTTAATCAAAGGCTGAAATCTCTGCCTGACCTGGCAGCCTGGCTCCCTCTGGGTCATATGGTGCAGACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp AGGGGCTGGATTCTCATCCACTGGACTTGGCACCAATaGCCTGTAAGCATGTGCCACTCTACGATCTTTCAG +
Preference number: 3 (lower is better)
Translates to: RGWILIHWTWHQ*PVSMCHSTIFQ
Trigger: CTGAAAGATCGTAGAGTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp GGCCCCGGCAGCCAGTCCACTCTCGGCACAGTAAGCTaGAAATCTGGTGATTCCGAAGAAAACAAATGTCTT +
Preference number: 3 (lower is better)
Translates to: GPGSQSTLGTVS*KSGDSEENKCL
Trigger: AAGACATTTGTTTTCTTCGGAATCACCAGATTTGCAGCTTACTGTGCCGAGAGTGGACTGGCTGCCGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp AAAAACAACACCGGGACCCCATGGAAGCGAGCGATGTaGACTCAGGAGACCACACAAACACTGTCCTCTATG +
Preference number: 3 (lower is better)
Translates to: KNNTGTPWKRAM*TQETTQTLSSM
Trigger: CATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCACATCGCTCGCTTCCATGGGGTCCCGGTGTTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAATACAGGCACAGCCTaGGTAGAAACAGTGAGCCCT +
Preference number: 3 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAENTGTA*VETVSP
Trigger: AGGGCTCACTGTTTCTACCAAGGCTGTGCCTGTATT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 72 bp AGGCCTGTCTGCTACAGAGGATGGTGCTGTTGGTGTTaGGGGCTCAGATGCTGTTGGTTCTATGAGAACAAC +
Preference number: 3 (lower is better)
Translates to: RPVCYRGWCCWC*GLRCCWFYENN
Trigger: GTTGTTCTCATAGAACCAACAGCATCTGAGCCCTCAACACCAACAGCACCATCCTCTGTAGCAGACAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp ATCGTCCAACTGCCTAGGCCCAATTTAATAACATGCTaGTTGTCTCCCTGGAACCGCCTGCCCACTCTATAC +
Preference number: 3 (lower is better)
Translates to: IVQLPRPNLITC*LSPWNRLPTLY
Trigger: GTATAGAGTGGGCAGGCGGTTCCAGGGAGACAAGCAGCATGTTATTAAATTGGGCCTAGGCAGTTGGACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp TGCCCTGTAAGCATGTGCCACTCTACGATCTTTCAGTaGGTTTTCTCTGCTGCCAAGGGGATATTCAGTGCC +
Preference number: 3 (lower is better)
Translates to: CPVSMCHSTIFQ*VFSAAKGIFSA
Trigger: GGCACTGAATATCCCCTTGGCAGCAGAGAAAACCCACTGAAAGATCGTAGAGTGGCACATGCTTACAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGAAACTCCAGAGCTTaGTTTTGGGAAGAGCTGACA +
Preference number: 3 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQRNSRA*FWEELT
Trigger: TGTCAGCTCTTCCCAAAACAAAGCTCTGGAGTTTCT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp ATCCACTGGACTTGGCACCAATGCCCTGTAAGCATGTaGCACTCTACGATCTTTCAGTGGGTTTTCTCTGCT +
Preference number: 3 (lower is better)
Translates to: IHWTWHQCPVSM*HSTIFQWVFSA
Trigger: AGCAGAGAAAACCCACTGAAAGATCGTAGAGTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCAGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp TCTCTAGAGAGCAAGACTATAAAATCAGTCAGCCAGTaGGGAGCCCACTCAGAGCAGACAGTAAACTCGGGA +
Preference number: 3 (lower is better)
Translates to: SLESKTIKSVSQ*GAHSEQTVNSG
Trigger: TCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCTGACTGATTTTATAGTCTTGCTCTCTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp ATTATCGTCCAACTGCCTAGGCCCAATTTAATAACATaGTGCTTGTCTCCCTGGAACCGCCTGCCCACTCTA +
Preference number: 3 (lower is better)
Translates to: IIVQLPRPNLIT*CLSPWNRLPTL
Trigger: TAGAGTGGGCAGGCGGTTCCAGGGAGACAAGCAGCATGTTATTAAATTGGGCCTAGGCAGTTGGACGATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp GGTGATTCCGAAGAAAACAAATGTCTTGTCACAATCTaGGTCTCCAACAGAAACCTGGCCAGGCGTAGTGGC +
Preference number: 3 (lower is better)
Translates to: GDSEENKCLVTI*VSNRNLARRSG
Trigger: GCCACTACGCCTGGCCAGGTTTCTGTTGGAGACCCAGATTGTGACAAGACATTTGTTTTCTTCGGAATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp CCTAGGCCCAATTTAATAACATGCTGCTTGTCTCCCTaGAACCGCCTGCCCACTCTATACATGGTTAGCACT +
Preference number: 3 (lower is better)
Translates to: PRPNLITCCLSP*NRLPTLYMVST
Trigger: AGTGCTAACCATGTATAGAGTGGGCAGGCGGTTCCAGGGAGACAAGCAGCATGTTATTAAATTGGGCCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCTAGGTGAGACTGTGTaGGTTGGTGCTAAGCTAAGA +
Preference number: 3 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSLGETV*VGAKLR
Trigger: TCTTAGCTTAGCACCAACCAACACAGTCTCACCTAG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 72 bp TCACTTACCTATGATGGGCAAGTCCTGTTCCATAACTaGCCCCAGTATTCCCACAGAATCACACTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: SLTYDGQVLFHN*PQYSHRITLQP
Trigger: AGGCTGGAGTGTGATTCTGTGGGAATACTGGGGTCAGTTATGGAACAGGACTTGCCCATCATAGGTAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR GCA 72 bp GCAATAAAAGCTTCCATGGTGACCAAACGTGACTCCTaGCTCTGTACATGGCAATGTGAGATGTGCCTGGAA +
Preference number: 3 (lower is better)
Translates to: AIKASMVTKRDS*LCTWQCEMCLE
Trigger: TTCCAGGCACATCTCACATTGCCATGTACAGAGGCAGGAGTCACGTTTGGTCACCATGGAAGCTTTTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAGAAACTCCAGAGCTTaGTTTTGGGAAGAGCTGACA +
Preference number: 3 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSRNSRA*FWEELT
Trigger: TGTCAGCTCTTCCCAAAACAAAGCTCTGGAGTTTCT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTCTCATCCACTGGACTaGGCACCAATGCCCTGTAAG +
Preference number: 3 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQSHPLD*APMPCK
Trigger: CTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAAGAAAACAAATGTCTaGTCACAATCTGGGTCTCCA +
Preference number: 3 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEKKTNV*SQSGSP
Trigger: TGGAGACCCAGATTGTGACAAGACATTTGTTTTCTT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 72 bp AAGAATGTCCTGGAAAGGCAGACACTGTCTAGCAGCTaGTGCCTCACATTAAACACTTCCAGCAGAAACTCC +
Preference number: 3 (lower is better)
Translates to: KNVLERQTLSSS*CLTLNTSSRNS
Trigger: GGAGTTTCTGCTGGAAGTGTTTAATGTGAGGCATCAGCTGCTAGACAGTGTCTGCCTTTCCAGGACATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCTAGGTGAGACTGTGTaGGTTGGTGCTAAGCTAAGA +
Preference number: 3 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQLGETV*VGAKLR
Trigger: TCTTAGCTTAGCACCAACCAACACAGTCTCACCTAG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACCTAAGGTCCCCGAATaGTCTGTTGGTGCCCCTCTC +
Preference number: 3 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRPKVPE*SVGAPL
Trigger: GAGAGGGGCACCAACAGACAATTCGGGGACCTTAGG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAAGAAAACAAATGTCTaGTCACAATCTGGGTCTCCA +
Preference number: 3 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSKKTNV*SQSGSP
Trigger: TGGAGACCCAGATTGTGACAAGACATTTGTTTTCTT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 72 bp TTTCAGAATGGCAGAACCCTAATTGACAAGCTCAAGTaGTCTGCGTATCAAAATGTGGACAGGACCAGAAGC +
Preference number: 3 (lower is better)
Translates to: FQNGRTLIDKLK*SAYQNVDRTRS
Trigger: GCTTCTGGTCCTGTCCACATTTTGATACGCAGATCACTTGAGCTTGTCAATTAGGGTTCTGCCATTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 72 bp GTAGGAGTCTCACCTTCCCGCAGTAATCCTTGCTCTTaGATCATCTATTTGCTGTCTCACTTACCTATGATG +
Preference number: 3 (lower is better)
Translates to: VGVSPSRSNPCS*IIYLLSHLPMM
Trigger: CATCATAGGTAAGTGAGACAGCAAATAGATGATTCAAGAGCAAGGATTACTGCGGGAAGGTGAGACTCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAAATACAGGCACAGCCTaGGTAGAAACAGTGAGCCCT +
Preference number: 3 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRNTGTA*VETVSP
Trigger: AGGGCTCACTGTTTCTACCAAGGCTGTGCCTGTATT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CCA 72 bp AGCAGAGTCAGAAAGTTTTCCTATAAGATCCATGCCTaGGCTTCTCTAGAGAGCAAGACTATAAAATCAGTC +
Preference number: 3 (lower is better)
Translates to: SRVRKFSYKIHA*ASLESKTIKSV
Trigger: GACTGATTTTATAGTCTTGCTCTCTAGAGAAGCCCAGGCATGGATCTTATAGGAAAACTTTCTGACTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR-3UTR CAA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAATATTCAGTGCCATTTaGCCACCTGCAGATCAAGAG +
Preference number: 3 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRIFSAI*PPADQE
Trigger: CTCTTGATCTGCAGGTGGCAAAATGGCACTGAATAT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR TCA 72 bp GAAACTTCATTTATTTCAGAATGGCAGAACCCTAATTaGCAAGCTCAAGTGATCTGCGTATCAAAATGTGGA +
Preference number: 3 (lower is better)
Translates to: ETSFISEWQNPN*QAQVICVSKCG
Trigger: TCCACATTTTGATACGCAGATCACTTGAGCTTGTCAATTAGGGTTCTGCCATTCTGAAATAAATGAAGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGGCTTGTCCCCGGTGTaGGTCCTCACGTGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGGLSPV*VLTWRD
Trigger: GTCCCGCCACGTGAGGACCCACACCGGGGACAAGCC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCGGGGCCACCGGCTCTaGGGTTTGGATCACCTGCGC +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGRGHRL*GLDHLR
Trigger: GCGCAGGTGATCCAAACCCCAGAGCCGGTGGCCCCG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTACGTGGGTCACCACGTaGCGCTCCAGCATGGACGGG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGTWVTT*RSSMDG
Trigger: CCCGTCCATGCTGGAGCGGCACGTGGTGACCCACGT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTATCGGGCTCTCCACCTaGACCATGGGCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGIGLST*TMGLQL
Trigger: CAGCTGGAGGCCCATGGTGCAGGTGGAGAGCCCGAT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTACGGGCAGTCACGGCTaGTCCTCCACACGCAGACAG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGTGSHG*SSTRRQ
Trigger: CTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCCCGT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGGCGTGGCCACTGGGTaGAGGGGGAACCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSGVATG*RGNPSR
Trigger: TCTGCTGGGGTTCCCCCTCCACCCAGTGGCCACGCC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGCTGGGCGTGGCCACTaGGTGGAGGGGGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPAGRGH*VEGEPQ
Trigger: CTGGGGTTCCCCCTCCACCCAGTGGCCACGCCCAGC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGGGCGGTCCCCGGTGTaGAGGCGAAGGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSGRSPV*RRRWFF
Trigger: GAAGAACCACCTTCGCCTTCACACCGGGGACCGCCC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGGCAGTGCTTGCACATaGACGGGCGGTCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPGSACT*TGGPRC
Trigger: ACACCGGGGACCGCCCGTTCATGTGCAAGCACTGCC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCACCTGCGCCATCTGTaGGGCTGCGGCCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPHLRHL*GCGLGF
Trigger: GAAACCCAGGCCGCAGCCTCACAGATGGCGCAGGTG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCTGTAGTCGGCTGGGATaGGCTGTCCCAGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSCSRLG*AVPGWP
Trigger: CGGCCAGCCTGGGACAGCTCATCCCAGCCGACTACA...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGTCTTCAGCTTGTGGTaGCCACGTCACCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGVFSLW*PRHQPP
Trigger: TGGGGGCTGGTGACGTGGTCACCACAAGCTGAAGAC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGAGAGGCCATTGGCTTaGCGGAAGCCCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGERPLA*RKPLPQ
Trigger: CTGTGGCAAGGGCTTCCGGCAAGCCAATGGCCTCTC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCACGTGGGTCACCACGTaGCGCTCCAGCATGGACGGG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPTWVTT*RSSMDG
Trigger: CCCGTCCATGCTGGAGCGGCACGTGGTGACCCACGT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGGGTGGCCCCATCTCTaGCAGTGTGGGATCCAACCA +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGGWPHL*QCGIQP
Trigger: TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCACCGTCGGGGCTGCCTaGACAAAGCCGGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPTVGAA*TKPADA
Trigger: GGCATCTGCCGGCTTTGTGCAGGCAGCCCCGACGGT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCTGTGGCAGGAGGATTaGGTGAGCCCGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGLWQED*VSPQRL
Trigger: CAACCTCTGCGGGCTCACGCAATCCTCCTGCCACAG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGCAGGTGTAGTCGGCTaGGATGAGCTGTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGAGVVG*DELSQA
Trigger: AGCCTGGGACAGCTCATCCCAGCCGACTACACCTGC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCCATCCCACAGCTTGTaGGGGGCTGGATTCTCATCC +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGPSHSL*GAGFSS
Trigger: GGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTCACCACCTGGGCCATaGGCTCTGGGAGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPSPPGP*ALGAEV
Trigger: GACCTCTGCTCCCAGAGCTCATGGCCCAGGTGGTGA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCATCGGGCTCTCCACCTaGACCATGGGCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPIGLST*TMGLQL
Trigger: CAGCTGGAGGCCCATGGTGCAGGTGGAGAGCCCGAT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGGCAGTGGCAGCATTTaGAGCCCCCACTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPGSGSI*SPHCGP
Trigger: TGGCCCACAGTGGGGGCTGCAAATGCTGCCACTGCC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCACGGGCAGTCACGGCTaGTCCTCCACACGCAGACAG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSTGSHG*SSTRRQ
Trigger: CTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCCCGT...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAACCGTCGGGGCTGCCTaGACAAAGCCGGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPTVGAA*TKPADA
Trigger: GGCATCTGCCGGCTTTGTGCAGGCAGCCCCGACGGT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGCTGCCGGCTGTAGTTaGGGAGCTCCATTGCGTCAA +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGAAGCS*GAPLRQ
Trigger: TTGACGCAATGGAGCTCCCCAACTACAGCCGGCAGC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTAACCTGCAGCAAGGCTaGCGTGGGGAAGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGNLQQG*RGEELL
Trigger: AAGGAGCTCTTCCCCACGCCAGCCTTGCTGCAGGTT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCGGGGCCACCGGCTCTaGGGTTTGGATCACCTGCGC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLRGHRL*GLDHLR
Trigger: GCGCAGGTGATCCAAACCCCAGAGCCGGTGGCCCCG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCCTCCTGGGGTACCCTaGTCACCAGCTCCCATCCCA +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPPPGVP*SPAPIP
Trigger: TGGGATGGGAGCTGGTGACCAGGGTACCCCAGGAGG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGGCGTGGCCACTGGGTaGAGGGGGAACCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSGVATG*RGNPSR
Trigger: TCTGCTGGGGTTCCCCCTCCACCCAGTGGCCACGCC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCCATCTCTGCCAGTGTaGGATCCAACCAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGPSLPV*DPTRHS
Trigger: GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTAGAAGGCGGCCATCTTaGGGCCGGCGCGCAATGGGT +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTRRRPS*GRRAMG
Trigger: ACCCATTGCGCGCCGGCCTCAAGATGGCCGCCTTCT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCCATGGGCCTCCAGCTaGTGTTTGTCCAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGPWASS*CLSSSF
Trigger: GAAAGAGCTGGACAAACATCAGCTGGAGGCCCATGG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGGGCGGTCCCCGGTGTaGAGGCGAAGGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMGRSPV*RRRWFF
Trigger: GAAGAACCACCTTCGCCTTCACACCGGGGACCGCCC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGCATGGACGGGGCACTaGAGATCTTCCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPAWTGH*RSSHTW
Trigger: CCACGTGTGGGAAGATCTTCAGTGCCCCGTCCATGC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCACCTGCGCCATCTGTaGGGCTGCGGCCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLHLRHL*GCGLGF
Trigger: GAAACCCAGGCCGCAGCCTCACAGATGGCGCAGGTG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTGGTGCTGTTGGTGTTaGGGGCTCAGATGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGWCCWC*GLRCCW
Trigger: CCAACAGCATCTGAGCCCTCAACACCAACAGCACCA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGCGCTTCAAGCAGGGTaGGACCTGACCATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPALQAG*DLTMWE
Trigger: CTCCCACATGGTCAGGTCTCACCCTGCTTGAAGCGC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTGTAGTCGGCTGGGATaGGCTGTCCCAGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLCSRLG*AVPGWP
Trigger: CGGCCAGCCTGGGACAGCTCATCCCAGCCGACTACA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGGGCCAGAGGGCATCTaGTGGGCCCCGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSGPEGI*WAPAAS
Trigger: ACTGGCTGCCGGGGCCCATCAGATGCCCTCTGGCCC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTCCAAAGTGATCACCTaGTCTGTCGGGGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPSKVIT*SVGATG
Trigger: GCCGGTGGCCCCGACAGAGCAGGTGATCACTTTGGA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGCTGTCGGCACATCATaGCTCCTGGGGTACCCTGGT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPAVGTS*LLGYPG
Trigger: ACCAGGGTACCCCAGGAGGCATGATGTGCCGACAGC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCACACGCAGACAGGACTaGCTGCCTGGTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPTRRQD*LPGAGH
Trigger: GTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGGTGGCAGACAGCCCTaGCTGGTGTGTAAACACCGC +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSGGRQP*LVCKHR
Trigger: GCGGTGTTTACACACCAGGCAGGGCTGTCTGCCACC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCACAAAGCCGGCAGATaGCAGTCAGTGGGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSHKAGR*QSVGVL
Trigger: CAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCTGTGGCAGGAGGATTaGGTGAGCCCGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPLWQED*VSPQRL
Trigger: CAACCTCTGCGGGCTCACGCAATCCTCCTGCCACAG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCAGGGCCCCCTGGAGTaGCAGCAAGCTCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSQGPLE*QQALGK
Trigger: CTTCCCCAGAGCTTGCTGCCACTCCAGGGGGCCCTG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGTTTCTGCATTCCTCTaGCTCTCCTGGGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGVSAFL*LSWAVG
Trigger: TCCCACAGCCCAGGAGAGCCAGAGGAATGCAGAAAC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGGATGGAGAGGCCATTaGCTTGCCGGAAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPGWRGH*LAGSPC
Trigger: GCAAGGGCTTCCGGCAAGCCAATGGCCTCTCCATCC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCACGTGGGGCAGGGGTaGTACTCTTTGGAGTGCACC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPHVGQG*YSLECT
Trigger: GGTGCACTCCAAAGAGTACCACCCCTGCCCCACGTG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGGCTTCCCTCCAACGTaGGTCACCACGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTGFPPT*VTTCRS
Trigger: GGAGCGGCACGTGGTGACCCACGTTGGAGGGAAGCC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCTGTGAGGCTGCGGCCTaGGTTTCCGTGCTCATCACC +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSCEAAA*VSVLIT
Trigger: GGTGATGAGCACGGAAACCCAGGCCGCAGCCTCACA...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGCTGGGCGTGGCCACTaGGTGGAGGGGGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILAGRGH*VEGEPQ
Trigger: CTGGGGTTCCCCCTCCACCCAGTGGCCACGCCCAGC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCATAGGGTGCTGGGCGTaGCCACTGGGTGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSIGCWA*PLGGGG
Trigger: TCCCCCTCCACCCAGTGGCCACGCCCAGCACCCTAT...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCCATCAATAGGGTGCTaGGCGTGGCCACTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSPSIGC*AWPLGG
Trigger: TCCACCCAGTGGCCACGCCCAGCACCCTATTGATGG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTAATGTGAGATGTGCCTaGAAGGAAGGGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGNVRCA*KEGVAP
Trigger: TGGGGCCACCCCTTCCTTCCAGGCACATCTCACATT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCTGGGAGCAGAGGTCTaGGGACCCACCGAACAGATC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPLGAEV*GPTEQI
Trigger: GATCTGTTCGGTGGGTCCCCAGACCTCTGCTCCCAG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCTCAAGGTACACAAATaGCCCCTAGGACACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGLKVHK*PLGHQA
Trigger: GGCCTGGTGTCCTAGGGGCCATTTGTGTACCTTGAG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCAGGGTCTGGGGAGGCTaGAGCCTCTTTCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPRVWGG*SLFLLL
Trigger: CAGCAAGAGAAAGAGGCTTCAGCCTCCCCAGACCCT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGAAGGCTCTGCCGGATaGAAGGCTGCTCATTTGGCC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPEGSAG*KAAHLA
Trigger: GGCCAAATGAGCAGCCTTTCATCCGGCAGAGCCTTC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGTTTGTGCCTTCTGCTaGGTGTGCCATGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSVCAFC*VCHGPE
Trigger: CTCTGGCCCATGGCACACTCAGCAGAAGGCACAAAC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTCACCACCTGGGCCATaGGCTCTGGGAGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSSPPGP*ALGAEV
Trigger: GACCTCTGCTCCCAGAGCTCATGGCCCAGGTGGTGA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGGATCAACGTGCCTCTaGCACTCCCTTCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPGSTCL*HSLQPQ
Trigger: TTGGGGCTGAAGGGAGTGTCAGAGGCACGTTGATCC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCCAAAGCCTGTGCTCTaGAACCCTGCCCCACACTTG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSPKPVL*NPAPHL
Trigger: CAAGTGTGGGGCAGGGTTTCAGAGCACAGGCTTTGG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTGGAGAAGTTGTGCTTaGCCACAGGTAGTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGWRSCA*PQVVCP
Trigger: CGGGCAAACTACCTGTGGGCAAGCACAACTTCTCCA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCTCCGCTGGGGTTTCTaGATTCCTCTGGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSLRWGF*IPLALL
Trigger: CAGGAGAGCCAGAGGAATGCAGAAACCCCAGCGGAG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGTGGTGACATGGTGCTaGAATGCTCCAGGAAAACGG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGVVTWC*NAPGKR
Trigger: CCGTTTTCCTGGAGCATTGCAGCACCATGTCACCAC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTAGATCAGCGTCACTGTaGCATCCAGCAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGRSASL*HPASPP
Trigger: TGGAGGACTTGCTGGATGGCACAGTGACGCTGATCT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGGCCTCCTCTCTGCTaGAAACGCAGGAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPGPPLC*KRRKAL
Trigger: CAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGCTGTCGGCACATCATaGCTCCTGGGGTACCCTGGT +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPAVGTS*LLGYPG
Trigger: ACCAGGGTACCCCAGGAGGCATGATGTGCCGACAGC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGAAGGGGCCAAGTGTaGCTCAGGAAGGGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPGRGQV*LRKGPK
Trigger: CTTAGGCCCCTTCCTGAGGCACACTTGGCCCCTTCC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGCCAGTCAGTGGGCGTaGTGGTCAGTAAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPASQWA*WSVRLC
Trigger: GCACAGCCTTACTGACCAGCACGCCCACTGACTGGC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACACAAAGCCGGCAGATaGCAGTCAGTGGGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPHKAGR*QSVGVL
Trigger: CAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTCTGGTTCCAGGTTCTaGTCATGCGCGTGGACAGTA +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGSGSRF*SCAWTV
Trigger: TACTGTCCACGCGCATGAGCAGAACCTGGAACCAGA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTGTGCTCTGAAACCCTaGCCCACACTTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPCALKP*PTLAPW
Trigger: CCAGGGAGCAAGTGTGGGGCAGGGTTTCAGAGCACA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTCTTTCCCTCCTCTGTaGTCCCTTTTGGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGSFPPL*SLLAAL
Trigger: CAGTGCAGCCAAAAGGGAGCACAGAGGAGGGAAAGA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGTGTGGGTCCTCACGTaGCGGGACAGCTCAATAGAC +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSVWVLT*RDSSID
Trigger: GTCTATTGAGCTGTCCCGCCACGTGAGGACCCACAC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGGCTTGTCCCCGGTGTaGGTCCTCACGTGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSGLSPV*VLTWRD
Trigger: GTCCCGCCACGTGAGGACCCACACCGGGGACAAGCC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGATGGAGAGGCCATTaGCTTGCCGGAAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPGWRGH*LAGSPC
Trigger: GCAAGGGCTTCCGGCAAGCCAATGGCCTCTCCATCC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCAACCTGCAGCAAGGCTaGCGTGGGGAAGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSNLQQG*RGEELL
Trigger: AAGGAGCTCTTCCCCACGCCAGCCTTGCTGCAGGTT...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCAAGCACCGGAATGGCTaGGACCCTGAATGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSKHRNG*DPECWH
Trigger: GTGCCAGCATTCAGGGTCCCAGCCATTCCGGTGCTT...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCACCGGCTCTGGGGTTTaGATCACCTGCGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPTGSGV*ITCAIC
Trigger: ACAGATGGCGCAGGTGATCCAAACCCCAGAGCCGGT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCCTCCTGGGGTACCCTaGTCACCAGCTCCCATCCCA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLPPGVP*SPAPIP
Trigger: TGGGATGGGAGCTGGTGACCAGGGTACCCCAGGAGG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCCTCCTGGGGTACCCTaGTCACCAGCTCCCATCCCA +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTPPGVP*SPAPIP
Trigger: TGGGATGGGAGCTGGTGACCAGGGTACCCCAGGAGG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACAGGCTGGCCGGAGCTaGCGCTCGCTGTGGAAACCG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSQAGRS*RSLWKP
Trigger: CGGTTTCCACAGCGAGCGCCAGCTCCGGCCAGCCTG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACTGGGAGCAGAGGTCTaGGGACCCACCGAACAGATC +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPLGAEV*GPTEQI
Trigger: GATCTGTTCGGTGGGTCCCCAGACCTCTGCTCCCAG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTGGTCCCTGCCCCTCTaGTTCCAGGTTCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPWSLPL*FQVLLM
Trigger: CATGAGCAGAACCTGGAACCAGAGGGGCAGGGACCA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGTGCCTCTGAGCTTTTaGCCTAAGTCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPVPLSF*PKSHQP
Trigger: GGGCTGGTGGGACTTAGGCCAAAAGCTCAGAGGCAC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGCATGGACGGGGCACTaGAGATCTTCCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSAWTGH*RSSHTW
Trigger: CCACGTGTGGGAAGATCTTCAGTGCCCCGTCCATGC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGCGCTTCAAGCAGGGTaGGACCTGACCATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTALQAG*DLTMWE
Trigger: CTCCCACATGGTCAGGTCTCACCCTGCTTGAAGCGC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGTCTTCAGCTTGTGGTaGCCACGTCACCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLVFSLW*PRHQPP
Trigger: TGGGGGCTGGTGACGTGGTCACCACAAGCTGAAGAC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCAGCTTCCAGGCACGTaGGGTTTAAACACACACCCG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPQLPGT*GLNTHP
Trigger: CGGGTGTGTGTTTAAACCTCACGTGCCTGGAAGCTG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGATCAACGTGCCTCTaGCACTCCCTTCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPGSTCL*HSLQPQ
Trigger: TTGGGGCTGAAGGGAGTGTCAGAGGCACGTTGATCC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACTCCGCTGGGGTTTCTaGATTCCTCTGGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPLRWGF*IPLALL
Trigger: CAGGAGAGCCAGAGGAATGCAGAAACCCCAGCGGAG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGCCTCACTAAAGGTTTaGACAGCAGGGGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSASLKV*TAGEGE
Trigger: TTCCCCCTCCCCTGCTGTGCAAACCTTTAGTGAGGC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCAGGGTGGAATTGGCTaGAAACTTCGCCCCACACTC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPQGGIG*KLRPTL
Trigger: GAGTGTGGGGCGAAGTTTGCAGCCAATTCCACCCTG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGAGAGGCCATTGGCTTaGCGGAAGCCCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMERPLA*RKPLPQ
Trigger: CTGTGGCAAGGGCTTCCGGCAAGCCAATGGCCTCTC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACGGCCTGGGTTTCCGTaGTCATCACCTTTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPRPGFP*SSPLGA
Trigger: AGCACCCAAAGGTGATGAGCACGGAAACCCAGGCCG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGGGGTTTGGATCACCTaGGCCATCTGTGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTGVWIT*AICEAA
Trigger: CGCAGCCTCACAGATGGCGCAGGTGATCCAAACCCC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGGGCCTCCTCTCTGCTaGAAACGCAGGAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMGPPLC*KRRKAL
Trigger: CAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGTGGGGCCTCCTCTCTaGTGCAAACGCAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSVGPPL*CKRRKA
Trigger: AGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCCCAC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGAGGGAGGCCTGTCTaGTACAGAGGATGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPGGRPV*YRGWCC
Trigger: ACAGCACCATCCTCTGTAGCAGACAGGCCTCCCTCC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGCAGACAGGACTGCCTaGCTGGTGCTGGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSADRTA*LVLVTV
Trigger: GACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTAAAGGATCACTGACCTaGAATAAGTGTGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGKGSLT*NKCGGL
Trigger: CAGGCCGCCACACTTATTGCAGGTCAGTGATCCTTT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGGTGGCAGACAGCCCTaGCTGGTGTGTAAACACCGC +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMGGRQP*LVCKHR
Trigger: GCGGTGTTTACACACCAGGCAGGGCTGTCTGCCACC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGGGTGGCCCCATCTCTaGCAGTGTGGGATCCAACCA +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTGWPHL*QCGIQP
Trigger: TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGCCAGTCAGTGGGCGTaGTGGTCAGTAAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTASQWA*WSVRLC
Trigger: GCACAGCCTTACTGACCAGCACGCCCACTGACTGGC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGACCGTCGGGGCTGCCTaGACAAAGCCGGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILTVGAA*TKPADA
Trigger: GGCATCTGCCGGCTTTGTGCAGGCAGCCCCGACGGT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCAAATCAGTCAGCCAGTaGGGAGCCCACTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPKSVSQ*GAHSEQ
Trigger: CTGCTCTGAGTGGGCTCCGCACTGGCTGACTGATTT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCATGTGCTCTGAAACCCTaGCCCACACTTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPCALKP*PTLAPW
Trigger: CCAGGGAGCAAGTGTGGGGCAGGGTTTCAGAGCACA...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACAGGGCCCCCTGGAGTaGCAGCAAGCTCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSQGPLE*QQALGK
Trigger: CTTCCCCAGAGCTTGCTGCCACTCCAGGGGGCCCTG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTTTCACAGGGCCCCCTaGAGTGGCAGCAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSFHRAP*SGSKLW
Trigger: CCAGAGCTTGCTGCCACTCCAGGGGGCCCTGTGAAA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTTTCACAGGGCCCCCTaGAGTGGCAGCAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMFHRAP*SGSKLW
Trigger: CCAGAGCTTGCTGCCACTCCAGGGGGCCCTGTGAAA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGTTTCTGCATTCCTCTaGCTCTCCTGGGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPVSAFL*LSWAVG
Trigger: TCCCACAGCCCAGGAGAGCCAGAGGAATGCAGAAAC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGTCGTCTTCACAGCCTaGAGGAGTTTTACCAAACCC +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGVVFTA*RSFTKP
Trigger: GGGTTTGGTAAAACTCCTCCAGGCTGTGAAGACGAC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGGCTTGGTTGGACTGTaGTGCTTGGCAAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPGLVGL*CLAKWL
Trigger: CAGCCACTTTGCCAAGCACCACAGTCCAACCAAGCC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGACAGGCTGCAGGCCTaGAAAAGATTTGTGGACACT +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGDRLQA*KRFVDT
Trigger: AGTGTCCACAAATCTTTTCCAGGCCTGCAGCCTGTC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCTTCTGTTCCCCAGGCTaGCTGTCTTCTTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSFCSPG*LSSLAA
Trigger: GGCAGCCAAAGAAGACAGCCAGCCTGGGGAACAGAA...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTTCTGTTCCCCAGGCTaGCTGTCTTCTTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPFCSPG*LSSLAA
Trigger: GGCAGCCAAAGAAGACAGCCAGCCTGGGGAACAGAA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTTCTGTTCCCCAGGCTaGCTGTCTTCTTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPFCSPG*LSSLAA
Trigger: GGCAGCCAAAGAAGACAGCCAGCCTGGGGAACAGAA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGTGTGGGTCCTCACGTaGCGGGACAGCTCAATAGAC +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPVWVLT*RDSSID
Trigger: GTCTATTGAGCTGTCCCGCCACGTGAGGACCCACAC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGGATGGAGAGGCCATTaGCTTGCCGGAAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMGWRGH*LAGSPC
Trigger: GCAAGGGCTTCCGGCAAGCCAATGGCCTCTCCATCC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCAGGTGTGCAGATGGATaGAGAGGCCATTGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPRCADG*RGHWLA
Trigger: GGCAAGCCAATGGCCTCTCCATCCATCTGCACACCT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTAGGGGTGGTACTCTTTaGAGTGCACCTCATGGATGT +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGRGGTL*SAPHGC
Trigger: ACATCCATGAGGTGCACTCCAAAGAGTACCACCCCT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCAGATCTTCCCACACGTaGGGCAGGGGTGGTACTCTT +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSRSSHT*GRGGTL
Trigger: AAGAGTACCACCCCTGCCCCACGTGTGGGAAGATCT...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTGCTCCGTGGTGACATaGTGCTGCAATGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPCSVVT*CCNAPG
Trigger: TCCTGGAGCATTGCAGCACCATGTCACCACGGAGCA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACTGTCAAGCTGGGCCTaGGAGGTGAAGAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPLSSWA*EVKSSP
Trigger: TGGGGAACTCTTCACCTCCCAGGCCCAGCTTGACAG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCCACGAGCTCAGAGCTaGCCTGAGATGCCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPPRAQS*PEMPEN
Trigger: ATTCTCAGGCATCTCAGGCCAGCTCTGAGCTCGTGG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCCACGAGCTCAGAGCTaGCCTGAGATGCCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPPRAQS*PEMPEN
Trigger: ATTCTCAGGCATCTCAGGCCAGCTCTGAGCTCGTGG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCCATCAATAGGGTGCTaGGCGTGGCCACTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSPSIGC*AWPLGG
Trigger: TCCACCCAGTGGCCACGCCCAGCACCCTATTGATGG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCTGCCTGCCTGGTGCTaGTCACAGTCTGCACCATAT +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSLPAWC*SQSAPY
Trigger: ATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCTTCTGGTCAGTTTTTaGCTTCTGAGGCCGACTCTG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGLLVSF*LLRPTL
Trigger: CAGAGTCGGCCTCAGAAGCCAAAAACTGACCAGAAG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCTGGGAGCAGAGGTCTaGGGACCCACCGAACAGATC +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTLGAEV*GPTEQI
Trigger: GATCTGTTCGGTGGGTCCCCAGACCTCTGCTCCCAG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCAAGCAGAACAGGGCTaGGGTGCTGAACTCACCCTT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPQAEQG*GAELTL
Trigger: AAGGGTGAGTTCAGCACCCCAGCCCTGTTCTGCTTG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCCTCCCAAGTATCACTaGGATACAAGCAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGPPKYH*DTSRTG
Trigger: CCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTGGATGTACCCAGGCTaGACACCAAAGCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPWMYPG*TPKPVL
Trigger: GAGCACAGGCTTTGGTGTCCAGCCTGGGTACATCCA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAAGCTCTGGGGAAGAATaGGGCTCTCCAGCACCTTCA +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPSSGEE*GSPAPS
Trigger: TGAAGGTGCTGGAGAGCCTCATTCTTCCCCAGAGCT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGAACCAGTCTCTCCTTaGTCATTCTGTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPEPVSP*SFCSPG
Trigger: GCCTGGGGAACAGAATGATCAAGGAGAGACTGGTTC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGGGCGGTCCCCGGTGTaGAGGCGAAGGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEGRSPV*RRRWFF
Trigger: GAAGAACCACCTTCGCCTTCACACCGGGGACCGCCC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTGCTGGCACTTGACATaGACCTGCAGCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSCWHLT*TCSKAG
Trigger: GCCAGCCTTGCTGCAGGTTCATGTCAAGTGCCAGCA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTGCTCAGATTCCAGGTaGCTGTCAAGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTCSDSR*LSSWAW
Trigger: CCAGGCCCAGCTTGACAGTCACCTGGAATCTGAGCA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCATGGTGCTGTTGGTGTTaGGGGCTCAGATGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPWCCWC*GLRCCW
Trigger: CCAACAGCATCTGAGCCCTCAACACCAACAGCACCA...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTGCCATTCTGCCCACTaGGCGCTGTCGGCACATCAT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMCHSAH*ALSAHH
Trigger: ATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTCAGTTTTTGGCTTCTaGGGCCGACTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGSVFGF*GRLCFR
Trigger: TCTAAAGCAGAGTCGGCCTCAGAAGCCAAAAACTGA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGGATCAACGTGCCTCTaGCACTCCCTTCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLGSTCL*HSLQPQ
Trigger: TTGGGGCTGAAGGGAGTGTCAGAGGCACGTTGATCC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCCATTGCGTCAACTCTaGCCCAAGAACTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPPLRQL*PKNCSS
Trigger: GGAAGAGCAGTTCTTGGGGCAGAGTTGACGCAATGG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCTCCGCTGGGGTTTCTaGATTCCTCTGGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTLRWGF*IPLALL
Trigger: CAGGAGAGCCAGAGGAATGCAGAAACCCCAGCGGAG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTTGGTTGGACTGTGGTaGTTGGCAAAGTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGLVGLW*LAKWLI
Trigger: AATCAGCCACTTTGCCAAGCACCACAGTCCAACCAA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCATGTATGCCAACTCCTaGATGACAGGCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPMYANS*MTGCRP
Trigger: AGGCCTGCAGCCTGTCATGCAGGAGTTGGCATACAT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTAATCCTTGGTCTCACTaGACTCCTTACACTGCACCT +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGNPWSH*TPYTAP
Trigger: AGGTGCAGTGTAAGGAGTGCAGTGAGACCAAGGATT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAATCGGGCTCTCCACCTaGACCATGGGCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSIGLST*TMGLQL
Trigger: CAGCTGGAGGCCCATGGTGCAGGTGGAGAGCCCGAT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGTCAGCTTATGGTACTaGATGCCTGAGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPVSLWY*MPEAWA
Trigger: TGCCCATGCCTCAGGCATGCAGTACCATAAGCTGAC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAAAGGTCATGAGGCAGTaGTTGCACATGAACGGGCGG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPKVMRQ*LHMNGR
Trigger: CCGCCCGTTCATGTGCAAGCACTGCCTCATGACCTT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTCTGACTGCTTGAAGTaGTCCGTGGTGACATGGTGC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPSDCLK*SVVTWC
Trigger: GCACCATGTCACCACGGAGCACTTCAAGCAGTCAGA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCTCTGACTGCTTGAAGTaGTCCGTGGTGACATGGTGC +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSSDCLK*SVVTWC
Trigger: GCACCATGTCACCACGGAGCACTTCAAGCAGTCAGA...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCAAGGTGGTCTCTGACTaGTTGAAGTGCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPKVVSD*LKCSVV
Trigger: CACCACGGAGCACTTCAAGCAGTCAGAGACCACCTT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCGGCCTGGGTTTCCGTaGTCATCACCTTTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSRPGFP*SSPLGA
Trigger: AGCACCCAAAGGTGATGAGCACGGAAACCCAGGCCG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCGGCCTGGGTTTCCGTaGTCATCACCTTTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMRPGFP*SSPLGA
Trigger: AGCACCCAAAGGTGATGAGCACGGAAACCCAGGCCG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGAACGTCACAAACACCTaGGACCCGGCAAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMNVTNT*DPASWV
Trigger: GACCCAGCTTGCCGGGTCGCAGGTGTTTGTGACGTT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCAGAGCTGGCCTGAGATaGCTGAGAATCTGGCAACGT +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSRAGLR*LRIWQR
Trigger: ACGTTGCCAGATTCTCAGGCATCTCAGGCCAGCTCT...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCAGAGCTGGCCTGAGATaGCTGAGAATCTGGCAACGT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPRAGLR*LRIWQR
Trigger: ACGTTGCCAGATTCTCAGGCATCTCAGGCCAGCTCT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCAGATCAGCGTCACTGTaGCATCCAGCAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSRSASL*HPASPP
Trigger: TGGAGGACTTGCTGGATGGCACAGTGACGCTGATCT...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGGAGGGAGGCCTGTCTaGTACAGAGGATGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMGGRPV*YRGWCC
Trigger: ACAGCACCATCCTCTGTAGCAGACAGGCCTCCCTCC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTGGTCAGTAAGGCTGTaGCTTCTGCGCTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPWSVRL*LLRFKQ
Trigger: CTGCTTGAAGCGCAGAAGGCACAGCCTTACTGACCA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTGCCCTGTAAGCATGTaGCACTCTACGATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGCPVSM*HSTIFQ
Trigger: CTGAAAGATCGTAGAGTGGCACATGCTTACAGGGCA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTGGACTTGGCACCAATaGCCTGTAAGCATGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPWTWHQ*PVSMCH
Trigger: GTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCATGAAGCTGACATaGCTTCCGTGGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPGMKLT*LPWSVG
Trigger: TCCCACTGACCACGGAAGGCATGTCAGCTTCATGCC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCTCCTTTGGTCAATGTaGAGCTTCCAGGCACGTGAG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPLLWSM*SFQARE
Trigger: CTCACGTGCCTGGAAGCTGCACATTGACCAAAGGAG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTGTGCTCTGAAACCCTaGCCCACACTTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSCALKP*PTLAPW
Trigger: CCAGGGAGCAAGTGTGGGGCAGGGTTTCAGAGCACA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGCTGCCGGCTGTAGTTaGGGAGCTCCATTGCGTCAA +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMAAGCS*GAPLRQ
Trigger: TTGACGCAATGGAGCTCCCCAACTACAGCCGGCAGC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGGCTCTCCTGGGCTGTaGGAGAATTCACACTCATCT +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSGSPGL*ENSHSS
Trigger: AGATGAGTGTGAATTCTCCCACAGCCCAGGAGAGCC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTTCCTCTGGCTCTCCTaGGCTGTGGGAGAATTCACA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPFLWLS*AVGEFT
Trigger: TGTGAATTCTCCCACAGCCCAGGAGAGCCAGAGGAA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGCAGCAGTTGCCAAATaGCTGTGGCAGAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSAAVAK*LWQRES
Trigger: AGACTCTCTCTGCCACAGCCATTTGGCAACTGCTGC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCACACTGCACAGGAGGTaGCATATTTCAATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPTLHRR*HISMAG
Trigger: CCCGGCCATTGAAATATGCCACCTCCTGTGCAGTGT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTCTTCAGGGTGGAATTaGCTGCAAACTTCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPSSGWN*LQTSPH
Trigger: GTGGGGCGAAGTTTGCAGCCAATTCCACCCTGAAGA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGTGTGGGTCCTCACGTaGCGGGACAGCTCAATAGAC +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTVWVLT*RDSSID
Trigger: GTCTATTGAGCTGTCCCGCCACGTGAGGACCCACAC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAAGATCTTCCCACACGTaGGGCAGGGGTGGTACTCTT +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPRSSHT*GRGGTL
Trigger: AAGAGTACCACCCCTGCCCCACGTGTGGGAAGATCT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTCACAGGAGCTGCACTaGAGTGATGAGAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGSQELH*SDENLE
Trigger: TTCCAAGTTCTCATCACTCCAGTGCAGCTCCTGTGA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCTGTCAAGCTGGGCCTaGGAGGTGAAGAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSLSSWA*EVKSSP
Trigger: TGGGGAACTCTTCACCTCCCAGGCCCAGCTTGACAG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGACCGGCTCTGGGGTTTaGATCACCTGCGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLTGSGV*ITCAIC
Trigger: ACAGATGGCGCAGGTGATCCAAACCCCAGAGCCGGT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTGCGACCCGGCAAGCTaGGTCTCCTCCAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSCDPAS*VSSKVI
Trigger: GATCACTTTGGAGGAGACCCAGCTTGCCGGGTCGCA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGCTGGGCGTGGCCACTaGGTGGAGGGGGAACCCCAG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGAGRGH*VEGEPQ
Trigger: CTGGGGTTCCCCCTCCACCCAGTGGCCACGCCCAGC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACTGCCTGCCTGGTGCTaGTCACAGTCTGCACCATAT +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPLPAWC*SQSAPY
Trigger: ATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTACAGGACTGCCTGCCTaGTGCTGGTCACAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTTGLPA*CWSQSA
Trigger: TGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGCAGACAGCCCTGCCTaGTGTGTAAACACCGCACCA +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSADSPA*CVNTAP
Trigger: TGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTCAAGCCACACAAGGTaGCAGACAGCCCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMSSHTR*QTALPG
Trigger: ACCAGGCAGGGCTGTCTGCCACCTTGTGTGGCTTGA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTCAAGCCACACAAGGTaGCAGACAGCCCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSSSHTR*QTALPG
Trigger: ACCAGGCAGGGCTGTCTGCCACCTTGTGTGGCTTGA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAAATGTGAGATGTGCCTaGAAGGAAGGGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPNVRCA*KEGVAP
Trigger: TGGGGCCACCCCTTCCTTCCAGGCACATCTCACATT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGCAGATGCCAGTCAGTaGGCGTGCTGGTCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMADASQ*ACWSVR
Trigger: CCTTACTGACCAGCACGCCCACTGACTGGCATCTGC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGTGGTCCCAGCTACTTaGGAAGCTGTGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSVVPAT*EAVAGG
Trigger: TCCTCCTGCCACAGCTTCCCAAGTAGCTGGGACCAC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCATTTGGGAGGCCCAGGTaGGAGAACTGCTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPFGRPR*ENCLSS
Trigger: TGAGCTCAAGCAGTTCTCCCACCTGGGCCTCCCAAA...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCTGCTGAGTGTGCCATaGGCCAGAGGGCATCTGATG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSLLSVP*ARGHLM
Trigger: CATCAGATGCCCTCTGGCCCATGGCACACTCAGCAG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTAACACCGGGACCCCATaGAAGCGAGCGATGTGGACT +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTNTGTP*KRAMWT
Trigger: AGTCCACATCGCTCGCTTCCATGGGGTCCCGGTGTT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTGGTCCCTGCCCCTCTaGTTCCAGGTTCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLWSLPL*FQVLLM
Trigger: CATGAGCAGAACCTGGAACCAGAGGGGCAGGGACCA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGCCTTCCGTGGTCAGTaGGAAGTCAGAATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPAFRGQ*EVRMLP
Trigger: AGGAAGCATTCTGACTTCCCACTGACCACGGAAGGC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTGCTGCTTGTCTCCCTaGAACCGCCTGCCCACTCTA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLCCLSP*NRLPTL
Trigger: TAGAGTGGGCAGGCGGTTCCAGGGAGACAAGCAGCA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGTGCCTCTGAGCTTTTaGCCTAAGTCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTVPLSF*PKSHQP
Trigger: GGGCTGGTGGGACTTAGGCCAAAAGCTCAGAGGCAC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCCCACACTTGCTCCCTaGGAAGGAGGGTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPPTLAP*EGGFRN
Trigger: ATTCCTAAACCCTCCTTCCCAGGGAGCAAGTGTGGG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGGTTCATTGCAGCACTaGCTGCATGGTACCAACGCT +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPGSLQH*LHGTNA
Trigger: AGCGTTGGTACCATGCAGCCAGTGCTGCAATGAACC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCACTGCCGTTCTTTATTaGCAGCGCCATAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPTAVLY*QRHRGH
Trigger: GTGTCCTCTATGGCGCTGTCAATAAAGAACGGCAGT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCTTTCTGAATGTCTCTaGGGATGGCGCAGAGACATC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPLSECL*GWRRDI
Trigger: GATGTCTCTGCGCCATCCTCAGAGACATTCAGAAAG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTAGCTCTGGGGAAGAATaGGGCTCTCCAGCACCTTCA +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTSSGEE*GSPAPS
Trigger: TGAAGGTGCTGGAGAGCCTCATTCTTCCCCAGAGCT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGAACCAGTCTCTCCTTaGTCATTCTGTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPEPVSP*SFCSPG
Trigger: GCCTGGGGAACAGAATGATCAAGGAGAGACTGGTTC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCCATGGGCCTCCAGCTaGTGTTTGTCCAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLPWASS*CLSSSF
Trigger: GAAAGAGCTGGACAAACATCAGCTGGAGGCCCATGG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGCAGATCCCGCAGCTaGAGGGCTTCCCTCCAACGT +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSCRSRS*RASLQR
Trigger: ACGTTGGAGGGAAGCCCTTCAGCTGCGGGATCTGCA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCACTCCAAAGGATCACTaGCCTGCAATAAGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPTPKDH*PAISVA
Trigger: CGCCACACTTATTGCAGGTCAGTGATCCTTTGGAGT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCTGTACATGGCAATGTaGGATGTGCCTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPLYMAM*DVPGRK
Trigger: CTTCCTTCCAGGCACATCTCACATTGCCATGTACAG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGTCCTGTTCCATAACTaGCCCCAGTATTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPVLFHN*PQYSHR
Trigger: TCTGTGGGAATACTGGGGTCAGTTATGGAACAGGAC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGTCTTCAGCTTGTGGTaGCCACGTCACCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSVFSLW*PRHQPP
Trigger: TGGGGGCTGGTGACGTGGTCACCACAAGCTGAAGAC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGATTCTCTGGAATGCTaGATGTCCTCCTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSDSLEC*MSSFTL
Trigger: GAGGGTGAAGGAGGACATTCAGCATTCCAGAGAATC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGGACACGAACACTCCTaGCCGAAGGGAACAATAAAG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPGHEHS*PKGTIK
Trigger: CTTTATTGTTCCCTTCGGGCAGGAGTGTTCGTGTCC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCAGAACTGCTGCTCCTTaGACAGAGTGTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPRTAAP*TECTAA
Trigger: AGCAGCTGTACACTCTGTGCAAGGAGCAGCAGTTCT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGTGCAATCACAGAACTaGTGCTCCTTGCACAGAGTG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPVQSQN*CSLHRV
Trigger: CACTCTGTGCAAGGAGCAGCAGTTCTGTGATTGCAC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGCCTCACTAAAGGTTTaGACAGCAGGGGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTASLKV*TAGEGE
Trigger: TTCCCCCTCCCCTGCTGTGCAAACCTTTAGTGAGGC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGCCTCACTAAAGGTTTaGACAGCAGGGGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLASLKV*TAGEGE
Trigger: TTCCCCCTCCCCTGCTGTGCAAACCTTTAGTGAGGC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCAGGGTGGAATTGGCTaGAAACTTCGCCCCACACTC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSQGGIG*KLRPTL
Trigger: GAGTGTGGGGCGAAGTTTGCAGCCAATTCCACCCTG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTAAGGTCATGAGGCAGTaGTTGCACATGAACGGGCGG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTKVMRQ*LHMNGR
Trigger: CCGCCCGTTCATGTGCAAGCACTGCCTCATGACCTT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGGGGTTTGGATCACCTaGGCCATCTGTGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILGVWIT*AICEAA
Trigger: CGCAGCCTCACAGATGGCGCAGGTGATCCAAACCCC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGTGGGGCCTCCTCTCTaGTGCAAACGCAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILVGPPL*CKRRKA
Trigger: AGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCCCAC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGCTGTCGGCACATCATaGCTCCTGGGGTACCCTGGT +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILAVGTS*LLGYPG
Trigger: ACCAGGGTACCCCAGGAGGCATGATGTGCCGACAGC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGGCAGTGGCAGCATTTaGAGCCCCCACTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQGSGSI*SPHCGP
Trigger: TGGCCCACAGTGGGGGCTGCAAATGCTGCCACTGCC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGGGTGGCCCCATCTCTaGCAGTGTGGGATCCAACCA +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILGWPHL*QCGIQP
Trigger: TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGGAAACCGTCGGGGCTaGCTGCACAAAGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEGNRRG*LHKAGR
Trigger: TCTGCCGGCTTTGTGCAGGCAGCCCCGACGGTTTCC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTGCCATTTTGCCACCTaGAGATCAAGAGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPCHFAT*RSRALP
Trigger: TGGGAGAGCTCTTGATCTGCAGGTGGCAAAATGGCA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGTGGGTTTTCTCTGCTaGCAAGGGGATATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPVGFLC*QGDIQC
Trigger: GCACTGAATATCCCCTTGGCAGCAGAGAAAACCCAC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCCAGCACTGGGTTTGTaGCTTCTGCTGAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSPALGL*LLLSVP
Trigger: TGGCACACTCAGCAGAAGGCACAAACCCAGTGCTGG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGAAATCAGTCAGCCAGTaGGGAGCCCACTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMKSVSQ*GAHSEQ
Trigger: CTGCTCTGAGTGGGCTCCGCACTGGCTGACTGATTT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAACCTGGTACTCACACTaGAGACCCTGCTACTCACTG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPTWYSH*RPCYSL
Trigger: CAGTGAGTAGCAGGGTCTGCAGTGTGAGTACCAGGT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGGCATGAAGCTGACATaGCTTCCGTGGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLGMKLT*LPWSVG
Trigger: TCCCACTGACCACGGAAGGCATGTCAGCTTCATGCC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACTCCTTTGGTCAATGTaGAGCTTCCAGGCACGTGAG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPLLWSM*SFQARE
Trigger: CTCACGTGCCTGGAAGCTGCACATTGACCAAAGGAG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGAGTGGCAGCAAGCTCTaGGGAAGAATGAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLSGSKL*GRMRLS
Trigger: GGAGAGCCTCATTCTTCCCCAGAGCTTGCTGCCACT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGTTTCTGCATTCCTCTaGCTCTCCTGGGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLVSAFL*LSWAVG
Trigger: TCCCACAGCCCAGGAGAGCCAGAGGAATGCAGAAAC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGTCGTCTTCACAGCCTaGAGGAGTTTTACCAAACCC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPVVFTA*RSFTKP
Trigger: GGGTTTGGTAAAACTCCTCCAGGCTGTGAAGACGAC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTCATCAGGGCTTGGTTaGACTGTGGTGCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPSSGLG*TVVLGK
Trigger: TTTGCCAAGCACCACAGTCCAACCAAGCCCTGATGA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCTCATCAGGGCTTGGTTaGACTGTGGTGCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSSSGLG*TVVLGK
Trigger: TTTGCCAAGCACCACAGTCCAACCAAGCCCTGATGA...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGCAGCAGTTGCCAAATaGCTGTGGCAGAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPAAVAK*LWQRES
Trigger: AGACTCTCTCTGCCACAGCCATTTGGCAACTGCTGC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCATGAGCAGGTCCAATaGACAGGTCTTTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSHEQVQ*TGLCLL
Trigger: CAGGAGACAAAGACCTGTCCATTGGACCTGCTCATG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTGGCATGTTCTGGGGTaGTCACTGCCCGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLWHVLG*SLPGRK
Trigger: CTTTCTTCCGGGCAGTGACCACCCCAGAACATGCCA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGGACTGATTTTTCCATaGCTCTGCTCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSGLIFP*LCSALL
Trigger: GAGCAGTGCTGAGCAGAGCCATGGAAAAATCAGTCC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGACAGGCTGCAGGCCTaGAAAAGATTTGTGGACACT +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSDRLQA*KRFVDT
Trigger: AGTGTCCACAAATCTTTTCCAGGCCTGCAGCCTGTC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTGCTCTGTCAGCTTATaGTACTGCATGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPCSVSL*YCMPEA
Trigger: TGCCTCAGGCATGCAGTACCATAAGCTGACAGAGCA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCTGAGTGCTTCTTCTTaGTGTGATAGGCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMLSASS*CDRPGR
Trigger: CCGCCCTGGCCTATCACACCAAGAAGAAGCACTCAG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGGCTTGTCCCCGGTGTaGGTCCTCACGTGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGGLSPV*VLTWRD
Trigger: GTCCCGCCACGTGAGGACCCACACCGGGGACAAGCC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACACGTGGGGCAGGGGTaGTACTCTTTGGAGTGCACC +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSHVGQG*YSLECT
Trigger: GGTGCACTCCAAAGAGTACCACCCCTGCCCCACGTG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGAGATCTTCCCACACGTaGGGCAGGGGTGGTACTCTT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMRSSHT*GRGGTL
Trigger: AAGAGTACCACCCCTGCCCCACGTGTGGGAAGATCT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACGTGCTCATCACCTTTaGGTGCTCAGATTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPRAHHL*VLRFQV
Trigger: CACCTGGAATCTGAGCACCCAAAGGTGATGAGCACG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTGTGAGGCTGCGGCCTaGGTTTCCGTGCTCATCACC +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILCEAAA*VSVLIT
Trigger: GGTGATGAGCACGGAAACCCAGGCCGCAGCCTCACA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGCCATCAATAGGGTGCTaGGCGTGGCCACTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILPSIGC*AWPLGG
Trigger: TCCACCCAGTGGCCACGCCCAGCACCCTATTGATGG...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCCAAGAAGAATGTCCTaGAAAGGCAGACACTGTCTA +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGPRRMS*KGRHCL
Trigger: TAGACAGTGTCTGCCTTTCCAGGACATTCTTCTTGG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCTGCCTGCCTGGTGCTaGTCACAGTCTGCACCATAT +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSLPAWC*SQSAPY
Trigger: ATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTCCTGCCTCTGTACATaGCAATGTGAGATGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPSCLCT*QCEMCL
Trigger: CAGGCACATCTCACATTGCCATGTACAGAGGCAGGA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCAGTCAGTGGGCGTGCTaGTCAGTAAGGCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSSQWAC*SVRLCL
Trigger: AAGGCACAGCCTTACTGACCAGCACGCCCACTGACT...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCTACTTGGGAAGCTGTaGCAGGAGGATTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTLLGKL*QEDCVS
Trigger: GCTCACGCAATCCTCCTGCCACAGCTTCCCAAGTAG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGCAATTCAGGTCTCTTaGGCAGAAGTAGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGAIQVS*AEVGEK
Trigger: CTTTTCTCCTACTTCTGCCCAAGAGACCTGAATTGC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGACCCTGCTACTCACTaGGCTCAAAGTTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPDPATH*AQSFPN
Trigger: GTTTGGGAAACTTTGAGCCCAGTGAGTAGCAGGGTC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTCCTCAGAGGAGACCTaGATTGCCAGGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMSSEET*IARETW
Trigger: CCAGGTTTCCCTGGCAATCCAGGTCTCCTCTGAGGA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTCCTCAGAGGAGACCTaGATTGCCAGGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLSSEET*IARETW
Trigger: CCAGGTTTCCCTGGCAATCCAGGTCTCCTCTGAGGA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCTGACATGCCTTCCGTaGTCAGTGGGAAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSLTCLP*SVGSQN
Trigger: ATTCTGACTTCCCACTGACCACGGAAGGCATGTCAG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTGCCCACTCTATACATaGTTAGCACTTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPCPLYT*LALPSL
Trigger: GAGGGAGGGAAGTGCTAACCATGTATAGAGTGGGCA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTGGATGTACCCAGGCTaGACACCAAAGCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSWMYPG*TPKPVL
Trigger: GAGCACAGGCTTTGGTGTCCAGCCTGGGTACATCCA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTGGATGTACCCAGGCTaGACACCAAAGCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLWMYPG*TPKPVL
Trigger: GAGCACAGGCTTTGGTGTCCAGCCTGGGTACATCCA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCTCTGTGCTCCCTTTTaGCTGCACTGTGTCTACATC +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSLCAPF*LHCVYI
Trigger: GATGTAGACACAGTGCAGCCAAAAGGGAGCACAGAG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAGAAGGCGGCCATCTTaGGGCCGGCGCGCAATGGGT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGRRRPS*GRRAMG
Trigger: ACCCATTGCGCGCCGGCCTCAAGATGGCCGCCTTCT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTAACCATGAGTGCATCTaGGAAGACACCTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGNHECI*EDTFIF
Trigger: GAAAATGAAGGTGTCTTCTCAGATGCACTCATGGTT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTCACAAGCTTCTCCATaGCCTCTCTTTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLSQASP*PLFLQG
Trigger: CCCCTGGAGAAAGAGAGGTCATGGAGAAGCTTGTGA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGAACCAGTCTCTCCTTaGTCATTCTGTTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSEPVSP*SFCSPG
Trigger: GCCTGGGGAACAGAATGATCAAGGAGAGACTGGTTC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGGCAGTGCTTGCACATaGACGGGCGGTCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGGSACT*TGGPRC
Trigger: ACACCGGGGACCGCCCGTTCATGTGCAAGCACTGCC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGCATGGACGGGGCACTaGAGATCTTCCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQAWTGH*RSSHTW
Trigger: CCACGTGTGGGAAGATCTTCAGTGCCCCGTCCATGC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGAAGATCGGTGGTTCTaGGCAGCAAATACGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTEDRWF*AANTSG
Trigger: CCCTGACGTATTTGCTGCTCAGAACCACCGATCTTC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCTGAATGCTGGCACTTaGCATGAACCTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTLNAGT*HEPAAR
Trigger: CCTTGCTGCAGGTTCATGTCAAGTGCCAGCATTCAG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGCTCAGATTCCAGGTaGCTGTCAAGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSCSDSR*LSSWAW
Trigger: CCAGGCCCAGCTTGACAGTCACCTGGAATCTGAGCA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGAAGGCTCTGCCGGATaGAAGGCTGCTCATTTGGCC +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILEGSAG*KAAHLA
Trigger: GGCCAAATGAGCAGCCTTTCATCCGGCAGAGCCTTC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTTCAGACTCTACTTCTaGAGCCACATGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPFRLYF*SHMSLG
Trigger: CCCAAGTGACATGTGGCTTCAGAAGTAGAGTCTGAA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTGGCAGAACCCTAATTaGCAAGCTCAAGTGATCTGC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPWQNPN*QAQVIC
Trigger: GCAGATCACTTGAGCTTGTCAATTAGGGTTCTGCCA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGAATTTCTCAGTGCTTaGAAGGATCTGACACTGGAA +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGEFLSA*KDLTLE
Trigger: TTCCAGTGTCAGATCCTTTCAAGCACTGAGAAATTC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCTTTCTGGGAGTCCCTaGTTGATCCCGCAAATAAAG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSLSGSP*LIPQIK
Trigger: CTTTATTTGCGGGATCAATCAGGGACTCCCAGAAAG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGGGGCTCACCACAGATaGATCGATGGAGATGGTATC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLGAHHR*IDGDGI
Trigger: GATACCATCTCCATCGATGCATCTGTGGTGAGCCCC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTGGAGAAGTTGTGCTTaGCCACAGGTAGTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLWRSCA*PQVVCP
Trigger: CGGGCAAACTACCTGTGGGCAAGCACAACTTCTCCA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTGTGCTTGTCTTCTTTaGCTCACTAAAGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGCACLL*LTKGLH
Trigger: GTGCAAACCTTTAGTGAGGCAAAGAAGACAAGCACA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCAAGGACACCAATGTATaGCAACTCCTGCATGACAGG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPKDTNV*QLLHDR
Trigger: CCTGTCATGCAGGAGTTGGCATACATTGGTGTCCTT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCACGTGGGTCACCACGTaGCGCTCCAGCATGGACGGG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGTWVTT*RSSMDG
Trigger: CCCGTCCATGCTGGAGCGGCACGTGGTGACCCACGT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTGTTCTGCTTTGATGTaGTTCTTGTGCTCAATGGTG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGCSALM*FLCSMV
Trigger: CACCATTGAGCACAAGAAGCACATCAAAGCAGAACA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGACATGGTGCTGCAATaGTCCAGGAAAACGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPDMVLQ*SRKTES
Trigger: ACTTTCCGTTTTCCTGGAGCATTGCAGCACCATGTC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCATCCGTGGTGACATGGTaGTGCAATGCTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPSVVTW*CNAPGK
Trigger: TTTTCCTGGAGCATTGCAGCACCATGTCACCACGGA...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTAAGGTGGTCTCTGACTaGTTGAAGTGCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTKVVSD*LKCSVV
Trigger: CACCACGGAGCACTTCAAGCAGTCAGAGACCACCTT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGGTGCTAAGCTAAGATaGTCACCACTCAGGACAGCC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLGAKLR*SPLRTA
Trigger: GGCTGTCCTGAGTGGTGAGCATCTTAGCTTAGCACC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGGTGCTAAGCTAAGATaGTCACCACTCAGGACAGCC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSGAKLR*SPLRTA
Trigger: GGCTGTCCTGAGTGGTGAGCATCTTAGCTTAGCACC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGGAAGGGGCCAAGTGTaGCTCAGGAAGGGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQGRGQV*LRKGPK
Trigger: CTTAGGCCCCTTCCTGAGGCACACTTGGCCCCTTCC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGGACTGCCTGCCTGGTaGTGGTCACAGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQGLPAW*WSQSAP
Trigger: TGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGCAGACAGGACTGCCTaGCTGGTGCTGGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQADRTA*LVLVTV
Trigger: GACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGGTGGCAGACAGCCCTaGCTGGTGTGTAAACACCGC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEGGRQP*LVCKHR
Trigger: GCGGTGTTTACACACCAGGCAGGGCTGTCTGCCACC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCAAGCTCAAGTGATCTaGGTATCAAAATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGQAQVI*VSKCGQ
Trigger: CTGTCCACATTTTGATACGCAGATCACTTGAGCTTG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTGGACTTGGCACCAATaGCCTGTAAGCATGTGCCAC +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMWTWHQ*PVSMCH
Trigger: GTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTCTGGTTCCAGGTTCTaGTCATGCGCGTGGACAGTA +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTSGSRF*SCAWTV
Trigger: TACTGTCCACGCGCATGAGCAGAACCTGGAACCAGA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAAGACCCCTGGTCCCTaGCCCTCTGGTTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQKTPGP*PSGSRF
Trigger: GAACCTGGAACCAGAGGGGCAGGGACCAGGGGTCTT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTCACACTGCAGACCCTaGTACTCACTGGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLSHCRP*YSLGSK
Trigger: CTTTGAGCCCAGTGAGTAGCAGGGTCTGCAGTGTGA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTCACACTGCAGACCCTaGTACTCACTGGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSSHCRP*YSLGSK
Trigger: CTTTGAGCCCAGTGAGTAGCAGGGTCTGCAGTGTGA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCTCCCTGGAACCGCCTaGCCACTCTATACATGGTTA +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMLPGTA*PLYTWL
Trigger: TAACCATGTATAGAGTGGGCAGGCGGTTCCAGGGAG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGTGCTCCCTTTTGGCTaGACTGTGTCTACATCTTCT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPVLPFG*TVSTSS
Trigger: AGAAGATGTAGACACAGTGCAGCCAAAAGGGAGCAC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTTTCACAGGGCCCCCTaGAGTGGCAGCAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEFHRAP*SGSKLW
Trigger: CCAGAGCTTGCTGCCACTCCAGGGGGCCCTGTGAAA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTTCCTCTGGCTCTCCTaGGCTGTGGGAGAATTCACA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLFLWLS*AVGEFT
Trigger: TGTGAATTCTCCCACAGCCCAGGAGAGCCAGAGGAA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGTTGCCAAATGGCTGTaGCAGAGAGAGTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPVAKWL*QRESAF
Trigger: AAAAGCAGACTCTCTCTGCCACAGCCATTTGGCAAC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGTTGCCAAATGGCTGTaGCAGAGAGAGTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPVAKWL*QRESAF
Trigger: AAAAGCAGACTCTCTCTGCCACAGCCATTTGGCAAC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGCAGCAGTTGCCAAATaGCTGTGGCAGAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTAAVAK*LWQRES
Trigger: AGACTCTCTCTGCCACAGCCATTTGGCAACTGCTGC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACATGAGCAGGTCCAATaGACAGGTCTTTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPHEQVQ*TGLCLL
Trigger: CAGGAGACAAAGACCTGTCCATTGGACCTGCTCATG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGACACTGCACAGGAGGTaGCATATTTCAATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLTLHRR*HISMAG
Trigger: CCCGGCCATTGAAATATGCCACCTCCTGTGCAGTGT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTGCATGCCTGAGGCATaGGCAAATTCTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMCMPEA*ANSLPQ
Trigger: CTGTGGCAGAGAATTTGCCCATGCCTCAGGCATGCA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTGCATGCCTGAGGCATaGGCAAATTCTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTCMPEA*ANSLPQ
Trigger: CTGTGGCAGAGAATTTGCCCATGCCTCAGGCATGCA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTCTTCAGGGTGGAATTaGCTGCAAACTTCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLSSGWN*LQTSPH
Trigger: GTGGGGCGAAGTTTGCAGCCAATTCCACCCTGAAGA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTACAGCATCACAGTACTaGCATGCATACATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGTASQY*HAYIFP
Trigger: AGGGAAAATGTATGCATGCCAGTACTGTGATGCTGT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGACAGCTCAATAGACTaGGCAAACACAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPDSSID*ANTASQ
Trigger: CTGTGATGCTGTGTTTGCCCAGTCTATTGAGCTGTC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGGCTTCCCTCCAACGTaGGTCACCACGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGGFPPT*VTTCRS
Trigger: GGAGCGGCACGTGGTGACCCACGTTGGAGGGAAGCC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGCAAATACGTCAGGGTaGTGGGTTCGATTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPANTSG*WVRLWY
Trigger: GTACCACAATCGAACCCACCACCCTGACGTATTTGC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTCACAGGAGCTGCACTaGAGTGATGAGAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPSQELH*SDENLE
Trigger: TTCCAAGTTCTCATCACTCCAGTGCAGCTCCTGTGA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTAAGAGCTCCTTACACTaGTCACATTCATGGAACTTC +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGKSSLH*SHSWNF
Trigger: GAAGTTCCATGAATGTGACCAGTGTAAGGAGCTCTT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCGTGCTCATCACCTTTaGGTGCTCAGATTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSRAHHL*VLRFQV
Trigger: CACCTGGAATCTGAGCACCCAAAGGTGATGAGCACG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCGTGCTCATCACCTTTaGGTGCTCAGATTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLRAHHL*VLRFQV
Trigger: CACCTGGAATCTGAGCACCCAAAGGTGATGAGCACG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTGCGACCCGGCAAGCTaGGTCTCCTCCAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILCDPAS*VSSKVI
Trigger: GATCACTTTGGAGGAGACCCAGCTTGCCGGGTCGCA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGAAAGGCTGCTCATTTaGCCTCACCACAGATCAGCG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMERLLI*PHHRSA
Trigger: CGCTGATCTGTGGTGAGGCCAAATGAGCAGCCTTTC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGAAAGGCTGCTCATTTaGCCTCACCACAGATCAGCG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSERLLI*PHHRSA
Trigger: CGCTGATCTGTGGTGAGGCCAAATGAGCAGCCTTTC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAATGGCCAGAGGCAGTaGCAGCATTTGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSNGQRQ*QHLQPP
Trigger: TGGGGGCTGCAAATGCTGCCACTGCCTCTGGCCATT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCCCTCTCACTTTAAATaGCCAGAGGCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTPSHFK*PEAVAA
Trigger: TGCTGCCACTGCCTCTGGCCATTTAAAGTGAGAGGG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCCCTCTCACTTTAAATaGCCAGAGGCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLPSHFK*PEAVAA
Trigger: TGCTGCCACTGCCTCTGGCCATTTAAAGTGAGAGGG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTATAGGGTGCTGGGCGTaGCCACTGGGTGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSIGCWA*PLGGGG
Trigger: TCCCCCTCCACCCAGTGGCCACGCCCAGCACCCTAT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTCAAGCCACACAAGGTaGCAGACAGCCCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILSSHTR*QTALPG
Trigger: ACCAGGCAGGGCTGTCTGCCACCTTGTGTGGCTTGA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGCAGATGCCAGTCAGTaGGCGTGCTGGTCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILADASQ*ACWSVR
Trigger: CCTTACTGACCAGCACGCCCACTGACTGGCATCTGC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCTCATCCACTGGACTTaGCACCAATGCCCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLLIHWT*HQCPVS
Trigger: GCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCTCATCCACTGGACTTaGCACCAATGCCCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTLIHWT*HQCPVS
Trigger: GCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCAGCTTGTGAGGGGCTaGATTCTCATCCACTGGACT +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTQLVRG*ILIHWT
Trigger: AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCAGCTTGTGAGGGGCTaGATTCTCATCCACTGGACT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMQLVRG*ILIHWT
Trigger: AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGTGGTCCCAGCTACTTaGGAAGCTGTGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILVVPAT*EAVAGG
Trigger: TCCTCCTGCCACAGCTTCCCAAGTAGCTGGGACCAC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACTGCTGAGTGTGCCATaGGCCAGAGGGCATCTGATG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSLLSVP*ARGHLM
Trigger: CATCAGATGCCCTCTGGCCCATGGCACACTCAGCAG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTGGAAGCGAGCGATGTaGACTCAGGAGACCACACAA +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTWKRAM*TQETTQ
Trigger: TTGTGTGGTCTCCTGAGTCCACATCGCTCGCTTCCA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTGGAAGCGAGCGATGTaGACTCAGGAGACCACACAA +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSWKRAM*TQETTQ
Trigger: TTGTGTGGTCTCCTGAGTCCACATCGCTCGCTTCCA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAAAGGGCAGCAGCCTATaGGGAACGAGGCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPKGSSL*GTRQKQ
Trigger: TTGTTTTTGCCTCGTTCCCCATAGGCTGCTGCCCTT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAAATCACACTCCAGCCTaGAATCTGACTGCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPNHTPA*NLTAFP
Trigger: GGGAAAGGCAGTCAGATTCCAGGCTGGAGTGTGATT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTTCTGCTCATGCGCGTaGACAGTAGGAGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMFCSCA*TVGVSP
Trigger: AGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGATTGCCAGGGAAACCTaGTACTCACACTGCAGACCC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLIARET*YSHCRP
Trigger: GGGTCTGCAGTGTGAGTACCAGGTTTCCCTGGCAAT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGATTGCCAGGGAAACCTaGTACTCACACTGCAGACCC +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMIARET*YSHCRP
Trigger: GGGTCTGCAGTGTGAGTACCAGGTTTCCCTGGCAAT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTACTGCCGTTCTTTATTaGCAGCGCCATAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTTAVLY*QRHRGH
Trigger: GTGTCCTCTATGGCGCTGTCAATAAAGAACGGCAGT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCTTTCTGAATGTCTCTaGGGATGGCGCAGAGACATC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLLSECL*GWRRDI
Trigger: GATGTCTCTGCGCCATCCTCAGAGACATTCAGAAAG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTCCAGCACCTTCAGATaGAAGGATTTCTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPSSTFR*KDFYLR
Trigger: CCTCAAGTAGAAATCCTTTCATCTGAAGGTGCTGGA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTCCAGCACCTTCAGATaGAAGGATTTCTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPSSTFR*KDFYLR
Trigger: CCTCAAGTAGAAATCCTTTCATCTGAAGGTGCTGGA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCAGAATTGAAACCACCTaGACCAGAGTCACGTTTCAC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPRIETT*TRVTFH
Trigger: GTGAAACGTGACTCTGGTTCAGGTGGTTTCAATTCT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTTCAATGGCCGGGACTaGTTTTTCCATGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTFNGRD*FFHGSA
Trigger: AGCAGAGCCATGGAAAAATCAGTCCCGGCCATTGAA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAATGCCAACTCCTGCATaGCAGGCTGCAGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQMPTPA*QAAGLE
Trigger: TTCCAGGCCTGCAGCCTGTCATGCAGGAGTTGGCAT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGATGCCAACTCCTGCATaGCAGGCTGCAGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEMPTPA*QAAGLE
Trigger: TTCCAGGCCTGCAGCCTGTCATGCAGGAGTTGGCAT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGGTCTGGGGAGGCTaGAGCCTCTTTCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQRVWGG*SLFLLL
Trigger: CAGCAAGAGAAAGAGGCTTCAGCCTCCCCAGACCCT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGGATCTTCTATGTTGTaGAAGGTGTGCAGATGGATG +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPGSSML*KVCRWM
Trigger: CATCCATCTGCACACCTTTCACAACATAGAAGATCC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGCTGGCACTTGACATaGACCTGCAGCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQCWHLT*TCSKAG
Trigger: GCCAGCCTTGCTGCAGGTTCATGTCAAGTGCCAGCA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGAAGGCTCTGCCGGATaGAAGGCTGCTCATTTGGCC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEEGSAG*KAAHLA
Trigger: GGCCAAATGAGCAGCCTTTCATCCGGCAGAGCCTTC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCTGTTTTGGGAAGAGCTaGCAACTGACAAGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSCFGKS*QLTRGY
Trigger: ATAACCCCTTGTCAGTTGTCAGCTCTTCCCAAAACA...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCTGTACATGGCAATGTaGGATGTGCCTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMLYMAM*DVPGRK
Trigger: CTTCCTTCCAGGCACATCTCACATTGCCATGTACAG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCTGTACATGGCAATGTaGGATGTGCCTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLLYMAM*DVPGRK
Trigger: CTTCCTTCCAGGCACATCTCACATTGCCATGTACAG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGAAGCAGGGTGAGACCTaGCCATGTGGGAGCAATAAA +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMKQGET*PCGSNK
Trigger: TTTATTGCTCCCACATGGTCAGGTCTCACCCTGCTT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCCATCCCACAGCTTGTaGGGGGCTGGATTCTCATCC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEPSHSL*GAGFSS
Trigger: GGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGTCCTGTTCCATAACTaGCCCCAGTATTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSVLFHN*PQYSHR
Trigger: TCTGTGGGAATACTGGGGTCAGTTATGGAACAGGAC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGCCCCGAAGTTTCCATaGCAACAAAACAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSAPKFP*QQNKDQ
Trigger: TTGATCCTTGTTTTGTTGTCATGGAAACTTCGGGGC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGATTCTCTGGAATGCTaGATGTCCTCCTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMDSLEC*MSSFTL
Trigger: GAGGGTGAAGGAGGACATTCAGCATTCCAGAGAATC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGGACACGAACACTCCTaGCCGAAGGGAACAATAAAG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSGHEHS*PKGTIK
Trigger: CTTTATTGTTCCCTTCGGGCAGGAGTGTTCGTGTCC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTACCAATGGAGATGGTaGAATCACAGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPYQWRW*NHRTAA
Trigger: AGCAGCAGTTCTGTGATTGCACCATCTCCATTGGTA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGCTGTCTTCTTTGGCTaGCTTTTCATCTTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGAVFFG*LFIFFV
Trigger: AACAAAGAAGATGAAAAGGCAGCCAAAGAAGACAGC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGCAGGGTGGAATTGGCTaGAAACTTCGCCCCACACTC +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILQGGIG*KLRPTL
Trigger: GAGTGTGGGGCGAAGTTTGCAGCCAATTCCACCCTG...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCTGGGGAAACTCATCCTaGACTTCTTGCAGTCATAAG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSWGNSS*TSCSHK
Trigger: CTTATGACTGCAAGAAGTGCAGGATGAGTTTCCCCA...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTGGGGAAACTCATCCTaGACTTCTTGCAGTCATAAG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPWGNSS*TSCSHK
Trigger: CTTATGACTGCAAGAAGTGCAGGATGAGTTTCCCCA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCTTGATGTGCTTCTTGTaGTCAATGGTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSLMCFL*SMVLGK
Trigger: CTTCCCCAACACCATTGAGCACAAGAAGCACATCAA...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCAGCTCCCATCCCACTaGTCTTTCAGACTCTACTTC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSQLPSH*SFRLYF
Trigger: GAAGTAGAGTCTGAAAGAGCAGTGGGATGGGAGCTG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGAAAGGATCACTGACCTaGAATAAGTGTGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMKGSLT*NKCGGL
Trigger: CAGGCCGCCACACTTATTGCAGGTCAGTGATCCTTT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGGAAACCGTCGGGGCTaGCTGCACAAAGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSGNRRG*LHKAGR
Trigger: TCTGCCGGCTTTGTGCAGGCAGCCCCGACGGTTTCC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAGCCTGGAATCTGACTaGCTTTCCCTCCTCACCACC +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSSLESD*LSLLTT
Trigger: GGTGGTGAGGAGGGAAAGGCAGTCAGATTCCAGGCT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCAGTGGGAAGTCAGAATaGTTCCTCAGAGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSSGKSE*FLRGDL
Trigger: CAGGTCTCCTCTGAGGAAGCATTCTGACTTCCCACT...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGAGTGGGAAGTCAGAATaGTTCCTCAGAGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMSGKSE*FLRGDL
Trigger: CAGGTCTCCTCTGAGGAAGCATTCTGACTTCCCACT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAGTGGCAGCAAGCTCTaGGGAAGAATGAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSSGSKL*GRMRLS
Trigger: GGAGAGCCTCATTCTTCCCCAGAGCTTGCTGCCACT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTCTTGTGAAACTGAATaGGCTGCTTCCTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPSCETE*AASSVS
Trigger: TGAGACTGAGGAAGCAGCCCATTCAGTTTCACAAGA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCATTTCTATTGTCTCCTTaGGTGTTCTGCCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPFLLSP*VFCPHS
Trigger: GCTGTGAGGGCAGAACACCCAAGGAGACAATAGAAA...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGGCTTGGTTGGACTGTaGTGCTTGGCAAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILGLVGL*CLAKWL
Trigger: CAGCCACTTTGCCAAGCACCACAGTCCAACCAAGCC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAATAATCATCAGGGCTTaGTTGGACTGTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPIIIRA*LDCGAW
Trigger: CCAAGCACCACAGTCCAACCAAGCCCTGATGATTAT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGGATTGTTTCTAAAGTaGCATGTTCTGGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPGLFLK*HVLGWS
Trigger: TGACCACCCCAGAACATGCCACTTTAGAAACAATCC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCCTGGAAAAGATTTGTaGACACTGCACAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSPGKDL*TLHRRW
Trigger: CCACCTCCTGTGCAGTGTCCACAAATCTTTTCCAGG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGACAGGCTGCAGGCCTaGAAAAGATTTGTGGACACT +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTDRLQA*KRFVDT
Trigger: AGTGTCCACAAATCTTTTCCAGGCCTGCAGCCTGTC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTTTCTCTTGCTGTCCTaGCAAGGAACCAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTFLLLS*QGTSLS
Trigger: GGAGAGACTGGTTCCTTGCCAGGACAGCAAGAGAAA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTTTCTCTTGCTGTCCTaGCAAGGAACCAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMFLLLS*QGTSLS
Trigger: GGAGAGACTGGTTCCTTGCCAGGACAGCAAGAGAAA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGAGGTCACATGTCACTaGAAGCCTCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPEVTCH*KPLLLL
Trigger: AAGAAGAAGAAGAGGCTTCCAGTGACATGTGACCTC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTGCTCTGTCAGCTTATaGTACTGCATGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLCSVSL*YCMPEA
Trigger: TGCCTCAGGCATGCAGTACCATAAGCTGACAGAGCA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGAGGTGTGCAGATGGATaGAGAGGCCATTGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILRCADG*RGHWLA
Trigger: GGCAAGCCAATGGCCTCTCCATCCATCTGCACACCT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCAGGGGTGGTACTCTTTaGAGTGCACCTCATGGATGT +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSRGGTL*SAPHGC
Trigger: ACATCCATGAGGTGCACTCCAAAGAGTACCACCCCT...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGAATACGTCAGGGTGGTaGGTTCGATTGTGGTACCAC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLNTSGW*VRLWYH
Trigger: GTGGTACCACAATCGAACCCACCACCCTGACGTATT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGCAAATACGTCAGGGTaGTGGGTTCGATTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTANTSG*WVRLWY
Trigger: GTACCACAATCGAACCCACCACCCTGACGTATTTGC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGCAGCAAGGCTGGCGTaGGGAAGAGCTCCTTACACT +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEAARLA*GRAPYT
Trigger: AGTGTAAGGAGCTCTTCCCCACGCCAGCCTTGCTGC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAACCTGCAGCAAGGCTaGCGTGGGGAAGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQNLQQG*RGEELL
Trigger: AAGGAGCTCTTCCCCACGCCAGCCTTGCTGCAGGTT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGCTCCGTGGTGACATaGTGCTGCAATGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSCSVVT*CCNAPG
Trigger: TCCTGGAGCATTGCAGCACCATGTCACCACGGAGCA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCTGTCAAGCTGGGCCTaGGAGGTGAAGAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAELSSWA*EVKSSP
Trigger: TGGGGAACTCTTCACCTCCCAGGCCCAGCTTGACAG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGACCGGCTCTGGGGTTTaGATCACCTGCGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAETGSGV*ITCAIC
Trigger: ACAGATGGCGCAGGTGATCCAAACCCCAGAGCCGGT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGGGCTCAGATGCTGTTaGTTCTATGAGAACAACGAA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPGLRCC*FYENNE
Trigger: TTCGTTGTTCTCATAGAACCAACAGCATCTGAGCCC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACCCCGAATTGTCTGTTaGTGCCCCTCTCACTTTAAA +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPPRIVC*CPSHFK
Trigger: TTTAAAGTGAGAGGGGCACCAACAGACAATTCGGGG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCCAAGAAGAATGTCCTaGAAAGGCAGACACTGTCTA +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPPRRMS*KGRHCL
Trigger: TAGACAGTGTCTGCCTTTCCAGGACATTCTTCTTGG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAACAGGACTGCCTGCCTaGTGCTGGTCACAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQTGLPA*CWSQSA
Trigger: TGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCCATCTCTGCCAGTGTaGGATCCAACCAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEPSLPV*DPTRHS
Trigger: GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGAGTCAGTGGGCGTGCTaGTCAGTAAGGCTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILSQWAC*SVRLCL
Trigger: AAGGCACAGCCTTACTGACCAGCACGCCCACTGACT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTGGATTCTCATCCACTaGACTTGGCACCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTWILIH*TWHQCP
Trigger: AGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCTATAAGATCCATGCCTaGGCTTCTCTAGAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSYKIHA*ASLESK
Trigger: CTTGCTCTCTAGAGAAGCCCAGGCATGGATCTTATA...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAACACCGGGACCCCATaGAAGCGAGCGATGTGGACT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQNTGTP*KRAMWT
Trigger: AGTCCACATCGCTCGCTTCCATGGGGTCCCGGTGTT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGGTCCCTGCCCCTCTaGTTCCAGGTTCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQWSLPL*FQVLLM
Trigger: CATGAGCAGAACCTGGAACCAGAGGGGCAGGGACCA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGATGAGTAAAGACCCCTaGTCCCTGCCCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILMSKDP*SLPLWF
Trigger: GAACCAGAGGGGCAGGGACCAGGGGTCTTTACTCAT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATCCTCAGAGGAGACCTaGATTGCCAGGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSSSEET*IARETW
Trigger: CCAGGTTTCCCTGGCAATCCAGGTCTCCTCTGAGGA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCTGACATGCCTTCCGTaGTCAGTGGGAAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMLTCLP*SVGSQN
Trigger: ATTCTGACTTCCCACTGACCACGGAAGGCATGTCAG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGCTGCTTGTCTCCCTaGAACCGCCTGCCCACTCTA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQCCLSP*NRLPTL
Trigger: TAGAGTGGGCAGGCGGTTCCAGGGAGACAAGCAGCA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGCAGCACTGGCTGCATaGTACCAACGCTATTCAAAG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMAALAA*YQRYSK
Trigger: CTTTGAATAGCGTTGGTACCATGCAGCCAGTGCTGC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404138.5
CDS-3UTR TCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCAAGCTTGTGAGCCCTaGAGTAAATGGTACCAATGG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMQACEP*SKWYQW
Trigger: CCATTGGTACCATTTACTTCAGGGCTCACAAGCTTG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCAAGCTTGTGAGCCCTaGAGTAAATGGTACCAATGG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSQACEP*SKWYQW
Trigger: CCATTGGTACCATTTACTTCAGGGCTCACAAGCTTG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGCTCTGGGGAAGAATaGGGCTCTCCAGCACCTTCA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQSSGEE*GSPAPS
Trigger: TGAAGGTGCTGGAGAGCCTCATTCTTCCCCAGAGCT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCTGATATCAGAGAATTaGAACCACCTGAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPLISEN*NHLNQS
Trigger: ACTCTGGTTCAGGTGGTTTCAATTCTCTGATATCAG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACCATGGGCCTCCAGCTaGTGTTTGTCCAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQPWASS*CLSSSF
Trigger: GAAAGAGCTGGACAAACATCAGCTGGAGGCCCATGG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGCAGATCCCGCAGCTaGAGGGCTTCCCTCCAACGT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGCRSRS*RASLQR
Trigger: ACGTTGGAGGGAAGCCCTTCAGCTGCGGGATCTGCA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCATGCTGTTGGTTCTATaGGAACAACGAAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPMLLVL*EQRSFH
Trigger: ATGGAAGCTTCGTTGTTCTCATAGAACCAACAGCAT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTTCAGACTCTACTTCTaGAGCCACATGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTFRLYF*SHMSLG
Trigger: CCCAAGTGACATGTGGCTTCAGAAGTAGAGTCTGAA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTTCAGACTCTACTTCTaGAGCCACATGTCACTTGGG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSFRLYF*SHMSLG
Trigger: CCCAAGTGACATGTGGCTTCAGAAGTAGAGTCTGAA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTCAGTTTTTGGCTTCTaGGGCCGACTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMSVFGF*GRLCFR
Trigger: TCTAAAGCAGAGTCGGCCTCAGAAGCCAAAAACTGA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTGTCTCACTTACCTATaGTGGGCAAGTCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSCLTYL*WASPVP
Trigger: TGGAACAGGACTTGCCCATCATAGGTAAGTGAGACA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCTTTCTGGGAGTCCCTaGTTGATCCCGCAAATAAAG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLLSGSP*LIPQIK
Trigger: CTTTATTTGCGGGATCAATCAGGGACTCCCAGAAAG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACCATTGCGTCAACTCTaGCCCAAGAACTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSPLRQL*PKNCSS
Trigger: GGAAGAGCAGTTCTTGGGGCAGAGTTGACGCAATGG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCACAGAGTGTACAGCTaGTGCAGCAGCTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSHRVYS*CSSCRL
Trigger: CAGCCGGCAGCTGCTGCAGCAGCTGTACACTCTGTG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCACAGAGTGTACAGCTaGTGCAGCAGCTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGHRVYS*CSSCRL
Trigger: CAGCCGGCAGCTGCTGCAGCAGCTGTACACTCTGTG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGGGGCTCACCACAGATaGATCGATGGAGATGGTATC +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSGAHHR*IDGDGI
Trigger: GATACCATCTCCATCGATGCATCTGTGGTGAGCCCC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTGCCCACAGGTAGTTTaGCCGTGTACATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLCPQVV*PCTSFP
Trigger: TGGAAATGATGTACACGGGCAAACTACCTGTGGGCA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTGTGCTTGTCTTCTTTaGCTCACTAAAGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPCACLL*LTKGLH
Trigger: GTGCAAACCTTTAGTGAGGCAAAGAAGACAAGCACA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCAAAGTGGCTGATTTCTaGAACTTCTCTAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSKVADF*NFSSRR
Trigger: CCTTCTGCTAGAGAAGTTGCAGAAATCAGCCACTTT...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTTGGTTGGACTGTGGTaGTTGGCAAAGTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLLVGLW*LAKWLI
Trigger: AATCAGCCACTTTGCCAAGCACCACAGTCCAACCAA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGACAGTCTCTGCCAGGTaGTCCTCCTCCGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAETVSAR*SSSEVK
Trigger: CTTTACCTCGGAGGAGGAGCACCTGGCAGAGACTGT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAACAGTCTCTGCCAGGTaGTCCTCCTCCGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQTVSAR*SSSEVK
Trigger: CTTTACCTCGGAGGAGGAGCACCTGGCAGAGACTGT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAATGTATGCCAACTCCTaGATGACAGGCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSMYANS*MTGCRP
Trigger: AGGCCTGCAGCCTGTCATGCAGGAGTTGGCATACAT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTAATCCTTGGTCTCACTaGACTCCTTACACTGCACCT +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTNPWSH*TPYTAP
Trigger: AGGTGCAGTGTAAGGAGTGCAGTGAGACCAAGGATT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACTTGCCGGAAGCCCTTaGCACAGTCTCTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQLAGSP*HSLCRH
Trigger: ATGTCTGCAGAGACTGTGGCAAGGGCTTCCGGCAAG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTGGTACTCTTTGGAGTaGACCTCATGGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSWYSLE*TSWMCF
Trigger: GAAGCACATCCATGAGGTGCACTCCAAAGAGTACCA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGACATGGTGCTGCAATaGTCCAGGAAAACGGAAAGT +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLDMVLQ*SRKTES
Trigger: ACTTTCCGTTTTCCTGGAGCATTGCAGCACCATGTC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTCCAAAGTGATCACCTaGTCTGTCGGGGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGSKVIT*SVGATG
Trigger: GCCGGTGGCCCCGACAGAGCAGGTGATCACTTTGGA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAGATCAGCGTCACTGTaGCATCCAGCAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSRSASL*HPASPP
Trigger: TGGAGGACTTGCTGGATGGCACAGTGACGCTGATCT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAACGCAGGAAGGCTCTaGCGGATGAAAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAENAGRL*RMKGCS
Trigger: TGAGCAGCCTTTCATCCGGCAGAGCCTTCCTGCGTT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAACGCAGGAAGGCTCTaGCGGATGAAAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQNAGRL*RMKGCS
Trigger: TGAGCAGCCTTTCATCCGGCAGAGCCTTCCTGCGTT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGGACTGCCTGCCTGGTaGTGGTCACAGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGGLPAW*WSQSAP
Trigger: TGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCACACGCAGACAGGACTaGCTGCCTGGTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGTRRQD*LPGAGH
Trigger: GTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTACCAAACGTGACTCCTaGCTCTGTACATGGCAATGT +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTTKRDS*LCTWQC
Trigger: ACATTGCCATGTACAGAGGCAGGAGTCACGTTTGGT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGGTCAGTAAGGCTGTaGCTTCTGCGCTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSWSVRL*LLRFKQ
Trigger: CTGCTTGAAGCGCAGAAGGCACAGCCTTACTGACCA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGCCAGTCAGTGGGCGTaGTGGTCAGTAAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGASQWA*WSVRLC
Trigger: GCACAGCCTTACTGACCAGCACGCCCACTGACTGGC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCAAGCTCAAGTGATCTaGGTATCAAAATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPQAQVI*VSKCGQ
Trigger: CTGTCCACATTTTGATACGCAGATCACTTGAGCTTG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCAAGCTCAAGTGATCTaGGTATCAAAATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSQAQVI*VSKCGQ
Trigger: CTGTCCACATTTTGATACGCAGATCACTTGAGCTTG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCATATTCAGTGCCATTTTaGCACCTGCAGATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPYSVPF*HLQIKS
Trigger: GCTCTTGATCTGCAGGTGGCAAAATGGCACTGAATA...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTGCCCTGTAAGCATGTaGCACTCTACGATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMCPVSM*HSTIFQ
Trigger: CTGAAAGATCGTAGAGTGGCACATGCTTACAGGGCA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCTCGGCACAGTAAGCTaGAAATCTGGTGATTCCGAA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLLGTVS*KSGDSE
Trigger: TTCGGAATCACCAGATTTGCAGCTTACTGTGCCGAG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCCAGCACTGGGTTTGTaGCTTCTGCTGAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEPALGL*LLLSVP
Trigger: TGGCACACTCAGCAGAAGGCACAAACCCAGTGCTGG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAAATCAGTCAGCCAGTaGGGAGCCCACTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQKSVSQ*GAHSEQ
Trigger: CTGCTCTGAGTGGGCTCCGCACTGGCTGACTGATTT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAAGACCCCTGGTCCCTaGCCCTCTGGTTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGKTPGP*PSGSRF
Trigger: GAACCTGGAACCAGAGGGGCAGGGACCAGGGGTCTT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATCACACTGCAGACCCTaGTACTCACTGGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSSHCRP*YSLGSK
Trigger: CTTTGAGCCCAGTGAGTAGCAGGGTCTGCAGTGTGA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCAATTTAATAACATGCTaGTTGTCTCCCTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPNLITC*LSPWNR
Trigger: GCGGTTCCAGGGAGACAAGCAGCATGTTATTAAATT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCCCAATTTAATAACATaGTGCTTGTCTCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPPNLIT*CLSPWN
Trigger: GTTCCAGGGAGACAAGCAGCATGTTATTAAATTGGG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCCCAATTTAATAACATaGTGCTTGTCTCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPPNLIT*CLSPWN
Trigger: GTTCCAGGGAGACAAGCAGCATGTTATTAAATTGGG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTCTTTCCCTCCTCTGTaGTCCCTTTTGGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILSFPPL*SLLAAL
Trigger: CAGTGCAGCCAAAAGGGAGCACAGAGGAGGGAAAGA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCATGCATCGATGGAGATaGTATCTGTGTTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPMHRWR*YLCYPA
Trigger: TGCTGGATAACACAGATACCATCTCCATCGATGCAT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCCACAGATGCATCGATaGAGATGGTATCTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPPQMHR*RWYLCY
Trigger: ATAACACAGATACCATCTCCATCGATGCATCTGTGG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGGCTCTCCTGGGCTGTaGGAGAATTCACACTCATCT +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILGSPGL*ENSHSS
Trigger: AGATGAGTGTGAATTCTCCCACAGCCCAGGAGAGCC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTTTCTATTGTCTCCTTaGGTGTTCTGCCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSFLLSP*VFCPHS
Trigger: GCTGTGAGGGCAGAACACCCAAGGAGACAATAGAAA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTTTCTATTGTCTCCTTaGGTGTTCTGCCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMFLLSP*VFCPHS
Trigger: GCTGTGAGGGCAGAACACCCAAGGAGACAATAGAAA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGTTGCCAAATGGCTGTaGCAGAGAGAGTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLVAKWL*QRESAF
Trigger: AAAAGCAGACTCTCTCTGCCACAGCCATTTGGCAAC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTGGCATGTTCTGGGGTaGTCACTGCCCGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEWHVLG*SLPGRK
Trigger: CTTTCTTCCGGGCAGTGACCACCCCAGAACATGCCA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTACTCAATCTTCTGTTaGATGGCCTCCAAGATCAAC +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPYSIFC*MASKIN
Trigger: GTTGATCTTGGAGGCCATCCAACAGAAGATTGAGTA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAACACTGCACAGGAGGTaGCATATTTCAATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSTLHRR*HISMAG
Trigger: CCCGGCCATTGAAATATGCCACCTCCTGTGCAGTGT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGACAGCTCAATAGACTaGGCAAACACAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMDSSID*ANTASQ
Trigger: CTGTGATGCTGTGTTTGCCCAGTCTATTGAGCTGTC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGACAGCTCAATAGACTaGGCAAACACAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTDSSID*ANTASQ
Trigger: CTGTGATGCTGTGTTTGCCCAGTCTATTGAGCTGTC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCATGGTGGGTTCGATTGTaGTACCACAAACCAGACAAT +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPWWVRL*YHKPDN
Trigger: ATTGTCTGGTTTGTGGTACCACAATCGAACCCACCA...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGCTCCGTGGTGACATaGTGCTGCAATGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQCSVVT*CCNAPG
Trigger: TCCTGGAGCATTGCAGCACCATGTCACCACGGAGCA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTGTGAGGCTGCGGCCTaGGTTTCCGTGCTCATCACC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSCEAAA*VSVLIT
Trigger: GGTGATGAGCACGGAAACCCAGGCCGCAGCCTCACA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGAGATGCCTGAGAATCTaGCAACGTCACAAACACCTG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMRCLRI*QRHKHL
Trigger: CAGGTGTTTGTGACGTTGCCAGATTCTCAGGCATCT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGAAAGGCTGCTCATTTaGCCTCACCACAGATCAGCG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILERLLI*PHHRSA
Trigger: CGCTGATCTGTGGTGAGGCCAAATGAGCAGCCTTTC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCCCCGAATTGTCTGTTaGTGCCCCTCTCACTTTAAA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLPRIVC*CPSHFK
Trigger: TTTAAAGTGAGAGGGGCACCAACAGACAATTCGGGG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCTGCGTATCAAAATGTaGACAGGACCAGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSLRIKM*TGPEAG
Trigger: ACCTGCTTCTGGTCCTGTCCACATTTTGATACGCAG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCTACTTGGGAAGCTGTaGCAGGAGGATTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAELLGKL*QEDCVS
Trigger: GCTCACGCAATCCTCCTGCCACAGCTTCCCAAGTAG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGCCTTCCGTGGTCAGTaGGAAGTCAGAATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSAFRGQ*EVRMLP
Trigger: AGGAAGCATTCTGACTTCCCACTGACCACGGAAGGC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGATTCTCCTTCCTTTCTaGGAGTCCCTGATTGATCCC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLILLPF*ESLIDP
Trigger: GGGATCAATCAGGGACTCCCAGAAAGGAAGGAGAAT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGCTTCCCTCCCTCCTTTaGTCAATGTGCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILLPSLL*SMCSFQ
Trigger: CTGGAAGCTGCACATTGACCAAAGGAGGGAGGGAAG...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACAAGCAGAACAGGGCTaGGGTGCTGAACTCACCCTT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQQAEQG*GAELTL
Trigger: AAGGGTGAGTTCAGCACCCCAGCCCTGTTCTGCTTG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CAA 72 bp ACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTaGGCACCAATGCCCTGTAAGCATGTGCCACTCTAC +
Preference number: 4 (lower is better)
Translates to: TACEGLDSHPLD*APMPCKHVPLY
Trigger: GTAGAGTGGCACATGCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGAGAAGGCGGCCATCTTaGGGCCGGCGCGCAATGGGT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQRRRPS*GRRAMG
Trigger: ACCCATTGCGCGCCGGCCTCAAGATGGCCGCCTTCT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAGGGTCTGGGGAGGCTaGAGCCTCTTTCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSRVWGG*SLFLLL
Trigger: CAGCAAGAGAAAGAGGCTTCAGCCTCCCCAGACCCT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGGATCTTCTATGTTGTaGAAGGTGTGCAGATGGATG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTGSSML*KVCRWM
Trigger: CATCCATCTGCACACCTTTCACAACATAGAAGATCC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACTGAATGCTGGCACTTaGCATGAACCTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQLNAGT*HEPAAR
Trigger: CCTTGCTGCAGGTTCATGTCAAGTGCCAGCATTCAG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCTGAATGCTGGCACTTaGCATGAACCTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAELNAGT*HEPAAR
Trigger: CCTTGCTGCAGGTTCATGTCAAGTGCCAGCATTCAG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTGCCATTCTGCCCACTaGGCGCTGTCGGCACATCAT +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSCHSAH*ALSAHH
Trigger: ATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGGAAGAGCTGACAACTaGCAAGGGGTTATCAGGCAT +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILGRADN*QGVIRH
Trigger: ATGCCTGATAACCCCTTGTCAGTTGTCAGCTCTTCC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTGTTTTGGGAAGAGCTaGCAACTGACAAGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLCFGKS*QLTRGY
Trigger: ATAACCCCTTGTCAGTTGTCAGCTCTTCCCAAAACA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTACAGTCTGCACCATATaGCCCAGAGGGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSTVCTI*PRGSQA
Trigger: AGCCTGGCTCCCTCTGGGTCATATGGTGCAGACTGT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGACTCCAAAGGATCACTaGCCTGCAATAAGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILTPKDH*PAISVA
Trigger: CGCCACACTTATTGCAGGTCAGTGATCCTTTGGAGT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAAGCAGGGTGAGACCTaGCCATGTGGGAGCAATAAA +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSKQGET*PCGSNK
Trigger: TTTATTGCTCCCACATGGTCAGGTCTCACCCTGCTT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCCCTTCACATGGAGATaGAGTCTTAAAGGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTPFTWR*SLKGLS
Trigger: GCTCAAACCTTTAAGACTTCATCTCCATGTGAAGGG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGAATTTCTCAGTGCTTaGAAGGATCTGACACTGGAA +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPEFLSA*KDLTLE
Trigger: TTCCAGTGTCAGATCCTTTCAAGCACTGAGAAATTC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGTTTGTGCCTTCTGCTaGGTGTGCCATGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGVCAFC*VCHGPE
Trigger: CTCTGGCCCATGGCACACTCAGCAGAAGGCACAAAC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGCCCCGAAGTTTCCATaGCAACAAAACAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTAPKFP*QQNKDQ
Trigger: TTGATCCTTGTTTTGTTGTCATGGAAACTTCGGGGC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCCAAAGCCTGTGCTCTaGAACCCTGCCCCACACTTG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGPKPVL*NPAPHL
Trigger: CAAGTGTGGGGCAGGGTTTCAGAGCACAGGCTTTGG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCCAAAGCCTGTGCTCTaGAACCCTGCCCCACACTTG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSPKPVL*NPAPHL
Trigger: CAAGTGTGGGGCAGGGTTTCAGAGCACAGGCTTTGG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGAGCACCGATTCAAACTaGCGTTCTTTATTGACAGCG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLSTDSN*RSLLTA
Trigger: CGCTGTCAATAAAGAACGGCAGTTTGAATCGGTGCT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAGAACTGCTGCTCCTTaGACAGAGTGTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSRTAAP*TECTAA
Trigger: AGCAGCTGTACACTCTGTGCAAGGAGCAGCAGTTCT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCTGTCTCAGAGGGAATaGTCAGAATCTCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSLSQRE*SESLSQ
Trigger: CTGTGAAAGAGATTCTGAGCATTCCCTCTGAGACAG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGCTGTCTTCTTTGGCTaGCTTTTCATCTTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSAVFFG*LFIFFV
Trigger: AACAAAGAAGATGAAAAGGCAGCCAAAGAAGACAGC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGTGGTGACATGGTGCTaGAATGCTCCAGGAAAACGG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQVVTWC*NAPGKR
Trigger: CCGTTTTCCTGGAGCATTGCAGCACCATGTCACCAC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGTGGTGACATGGTGCTaGAATGCTCCAGGAAAACGG +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEVVTWC*NAPGKR
Trigger: CCGTTTTCCTGGAGCATTGCAGCACCATGTCACCAC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTCCGTGGTGACATGGTaGTGCAATGCTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILSVVTW*CNAPGK
Trigger: TTTTCCTGGAGCATTGCAGCACCATGTCACCACGGA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAAGGTGGTCTCTGACTaGTTGAAGTGCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEKVVSD*LKCSVV
Trigger: CACCACGGAGCACTTCAAGCAGTCAGAGACCACCTT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAACGTCACAAACACCTaGGACCCGGCAAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSNVTNT*DPASWV
Trigger: GACCCAGCTTGCCGGGTCGCAGGTGTTTGTGACGTT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAGAGCTGGCCTGAGATaGCTGAGAATCTGGCAACGT +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAERAGLR*LRIWQR
Trigger: ACGTTGCCAGATTCTCAGGCATCTCAGGCCAGCTCT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGCCGGATGAAAGGCTaGTCATTTGGCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQCRMKG*SFGLTT
Trigger: TGTGGTGAGGCCAAATGAGCAGCCTTTCATCCGGCA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTGCCGGATGAAAGGCTaGTCATTTGGCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAECRMKG*SFGLTT
Trigger: TGTGGTGAGGCCAAATGAGCAGCCTTTCATCCGGCA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGGAGGGAGGCCTGTCTaGTACAGAGGATGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGGGRPV*YRGWCC
Trigger: ACAGCACCATCCTCTGTAGCAGACAGGCCTCCCTCC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGGTCAGTAAGGCTGTaGCTTCTGCGCTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQWSVRL*LLRFKQ
Trigger: CTGCTTGAAGCGCAGAAGGCACAGCCTTACTGACCA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTATTCAGTGCCATTTTaGCACCTGCAGATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSYSVPF*HLQIKS
Trigger: GCTCTTGATCTGCAGGTGGCAAAATGGCACTGAATA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCTCCTTTGGTCAATGTaGAGCTTCCAGGCACGTGAG +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAELLWSM*SFQARE
Trigger: CTCACGTGCCTGGAAGCTGCACATTGACCAAAGGAG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCTCCCTGGAACCGCCTaGCCACTCTATACATGGTTA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAELPGTA*PLYTWL
Trigger: TAACCATGTATAGAGTGGGCAGGCGGTTCCAGGGAG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACCCAATTTAATAACATaGTGCTTGTCTCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPPNLIT*CLSPWN
Trigger: GTTCCAGGGAGACAAGCAGCATGTTATTAAATTGGG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGCTGCCGGCTGTAGTTaGGGAGCTCCATTGCGTCAA +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSAAGCS*GAPLRQ
Trigger: TTGACGCAATGGAGCTCCCCAACTACAGCCGGCAGC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTGGTACCAATGGAGATaGTGCAATCACAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLWYQWR*CNHRTA
Trigger: AGCAGTTCTGTGATTGCACCATCTCCATTGGTACCA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCAGTAAATGGTACCAATaGAGATGGTGCAATCACAGA +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPSKWYQ*RWCNHR
Trigger: TCTGTGATTGCACCATCTCCATTGGTACCATTTACT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCAGGGCCCCCTGGAGTaGCAGCAAGCTCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQQGPLE*QQALGK
Trigger: CTTCCCCAGAGCTTGCTGCCACTCCAGGGGGCCCTG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTGGTGCTTGGCAAAGTaGCTGATTTCTGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLWCLAK*LISATS
Trigger: AGAAGTTGCAGAAATCAGCCACTTTGCCAAGCACCA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGGATTGTTTCTAAAGTaGCATGTTCTGGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTGLFLK*HVLGWS
Trigger: TGACCACCCCAGAACATGCCACTTTAGAAACAATCC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGCCTCCAAGATCAACTaGTTATGCCTCAGGATTGTT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMASKIN*LCLRIV
Trigger: AACAATCCTGAGGCATAACCAGTTGATCTTGGAGGC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCAATCTTCTGTTGGATaGCCTCCAAGATCAACTGGT +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLQSSVG*PPRSTG
Trigger: ACCAGTTGATCTTGGAGGCCATCCAACAGAAGATTG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACCTGGAAAAGATTTGTaGACACTGCACAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSPGKDL*TLHRRW
Trigger: CCACCTCCTGTGCAGTGTCCACAAATCTTTTCCAGG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGCCTGGAAAAGATTTGTaGACACTGCACAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILPGKDL*TLHRRW
Trigger: CCACCTCCTGTGCAGTGTCCACAAATCTTTTCCAGG...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGGTGGTTCTTCAGGGTaGAATTGGCTGCAAACTTCG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSGGSSG*NWLQTS
Trigger: CGAAGTTTGCAGCCAATTCCACCCTGAAGAACCACC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTTCCCTCCAACGTaGGTCACCACGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQGFPPT*VTTCRS
Trigger: GGAGCGGCACGTGGTGACCCACGTTGGAGGGAAGCC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGCAGCAAGGCTGGCGTaGGGAAGAGCTCCTTACACT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGAARLA*GRAPYT
Trigger: AGTGTAAGGAGCTCTTCCCCACGCCAGCCTTGCTGC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAAGCACCGGAATGGCTaGGACCCTGAATGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSKHRNG*DPECWH
Trigger: GTGCCAGCATTCAGGGTCCCAGCCATTCCGGTGCTT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGCGACCCGGCAAGCTaGGTCTCCTCCAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGCDPAS*VSSKVI
Trigger: GATCACTTTGGAGGAGACCCAGCTTGCCGGGTCGCA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGGGCTCAGATGCTGTTaGTTCTATGAGAACAACGAA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLGLRCC*FYENNE
Trigger: TTCGTTGTTCTCATAGAACCAACAGCATCTGAGCCC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAATGGCCAGAGGCAGTaGCAGCATTTGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGNGQRQ*QHLQPP
Trigger: TGGGGGCTGCAAATGCTGCCACTGCCTCTGGCCATT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCCCTCTCACTTTAAATaGCCAGAGGCAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEPSHFK*PEAVAA
Trigger: TGCTGCCACTGCCTCTGGCCATTTAAAGTGAGAGGG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGCAGACAGCCCTGCCTaGTGTGTAAACACCGCACCA +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSADSPA*CVNTAP
Trigger: TGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCCATCTCTGCCAGTGTaGGATCCAACCAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSPSLPV*DPTRHS
Trigger: GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTCCTGCCTCTGTACATaGCAATGTGAGATGTGCCTG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILSCLCT*QCEMCL
Trigger: CAGGCACATCTCACATTGCCATGTACAGAGGCAGGA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGCAGATGCCAGTCAGTaGGCGTGCTGGTCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGADASQ*ACWSVR
Trigger: CCTTACTGACCAGCACGCCCACTGACTGGCATCTGC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTGTCTTGTCACAATCTaGGTCTCCAACAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMCLVTI*VSNRNL
Trigger: CAGGTTTCTGTTGGAGACCCAGATTGTGACAAGACA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTGTCTTGTCACAATCTaGGTCTCCAACAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTCLVTI*VSNRNL
Trigger: CAGGTTTCTGTTGGAGACCCAGATTGTGACAAGACA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTATAAGATCCATGCCTaGGCTTCTCTAGAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLYKIHA*ASLESK
Trigger: CTTGCTCTCTAGAGAAGCCCAGGCATGGATCTTATA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGCAATTCAGGTCTCTTaGGCAGAAGTAGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMAIQVS*AEVGEK
Trigger: CTTTTCTCCTACTTCTGCCCAAGAGACCTGAATTGC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGGAAGCGAGCGATGTaGACTCAGGAGACCACACAA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQWKRAM*TQETTQ
Trigger: TTGTGTGGTCTCCTGAGTCCACATCGCTCGCTTCCA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAACACCGGGACCCCATaGAAGCGAGCGATGTGGACT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGNTGTP*KRAMWT
Trigger: AGTCCACATCGCTCGCTTCCATGGGGTCCCGGTGTT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAAGGGCAGCAGCCTATaGGGAACGAGGCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSKGSSL*GTRQKQ
Trigger: TTGTTTTTGCCTCGTTCCCCATAGGCTGCTGCCCTT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGAATCACACTCCAGCCTaGAATCTGACTGCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILNHTPA*NLTAFP
Trigger: GGGAAAGGCAGTCAGATTCCAGGCTGGAGTGTGATT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTTCTGCTCATGCGCGTaGACAGTAGGAGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEFCSCA*TVGVSP
Trigger: AGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATTCTGCTCATGCGCGTaGACAGTAGGAGTCTCACCT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQFCSCA*TVGVSP
Trigger: AGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGATTGCCAGGGAAACCTaGTACTCACACTGCAGACCC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEIARET*YSHCRP
Trigger: GGGTCTGCAGTGTGAGTACCAGGTTTCCCTGGCAAT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGCCTCCCAAGTATCACTaGGATACAAGCAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILPPKYH*DTSRTG
Trigger: CCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGG...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCCCACACTTGCTCCCTaGGAAGGAGGGTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEPTLAP*EGGFRN
Trigger: ATTCCTAAACCCTCCTTCCCAGGGAGCAAGTGTGGG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTTACCCAGGATTCTCTaGAATGCTGAATGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMLPRIL*NAECPP
Trigger: AGGAGGACATTCAGCATTCCAGAGAATCCTGGGTAA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGCAGGATTAGAATATTaGTACAGCCTCAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMAGLEY*YSLNRD
Trigger: GTCCCTGTTGAGGCTGTACCAATATTCTAATCCTGC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
3UTR CAA 72 bp CAGACAGTAAACTCGGGAAGGGCCTTCCCCTCTTTCTaGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QTVNSGRAFPSF*MRTSTGFVPSA
Trigger: AGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGCCCTTCCCGAGTTTACTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACTTTCTGAATGTCTCTaGGGATGGCGCAGAGACATC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQLSECL*GWRRDI
Trigger: GATGTCTCTGCGCCATCCTCAGAGACATTCAGAAAG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCTGATATCAGAGAATTaGAACCACCTGAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTLISEN*NHLNQS
Trigger: ACTCTGGTTCAGGTGGTTTCAATTCTCTGATATCAG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAATGGTACTGCATGCCTaGGGCATGGGCAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQMVLHA*GMGKFS
Trigger: AGAGAATTTGCCCATGCCTCAGGCATGCAGTACCAT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACATCTGTTTTCTAGGTaGGACTGTGTTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSHLFSR*DCVGWC
Trigger: GCACCAACCAACACAGTCTCACCTAGAAAACAGATG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGGTGCTGTTGGTGTTaGGGGCTCAGATGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGWCCWC*GLRCCW
Trigger: CCAACAGCATCTGAGCCCTCAACACCAACAGCACCA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGGAAGAGCTGACAACTaGCAAGGGGTTATCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQGRADN*QGVIRH
Trigger: ATGCCTGATAACCCCTTGTCAGTTGTCAGCTCTTCC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAAGAGATTTCAGCCTTTaGTTAAAGGAAGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPRDFSL*LKEGDE
Trigger: TTCATCCCCTTCCTTTAATCAAAGGCTGAAATCTCT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAATTGACAAGCTCAAGTaGTCTGCGTATCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPIDKLK*SAYQNV
Trigger: CACATTTTGATACGCAGATCACTTGAGCTTGTCAAT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGTGCTTGAAAGGATCTaGCACTGGAATTCAAAATTT +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPVLERI*HWNSKF
Trigger: AAATTTTGAATTCCAGTGTCAGATCCTTTCAAGCAC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGTCTCACTTACCTATaGTGGGCAAGTCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSCLTYL*WASPVP
Trigger: TGGAACAGGACTTGCCCATCATAGGTAAGTGAGACA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTGTCTCACTTACCTATaGTGGGCAAGTCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILCLTYL*WASPVP
Trigger: TGGAACAGGACTTGCCCATCATAGGTAAGTGAGACA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCAGCTTCCAGGCACGTaGGGTTTAAACACACACCCG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSQLPGT*GLNTHP
Trigger: CGGGTGTGTGTTTAAACCTCACGTGCCTGGAAGCTG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGGACACGAACACTCCTaGCCGAAGGGAACAATAAAG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQGHEHS*PKGTIK
Trigger: CTTTATTGTTCCCTTCGGGCAGGAGTGTTCGTGTCC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAGAACTGCTGCTCCTTaGACAGAGTGTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAERTAAP*TECTAA
Trigger: AGCAGCTGTACACTCTGTGCAAGGAGCAGCAGTTCT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGTGCAATCACAGAACTaGTGCTCCTTGCACAGAGTG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQVQSQN*CSLHRV
Trigger: CACTCTGTGCAAGGAGCAGCAGTTCTGTGATTGCAC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGAAAGTGGCTGATTTCTaGAACTTCTCTAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLKVADF*NFSSRR
Trigger: CCTTCTGCTAGAGAAGTTGCAGAAATCAGCCACTTT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAATCCTTGGTCTCACTaGACTCCTTACACTGCACCT +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSNPWSH*TPYTAP
Trigger: AGGTGCAGTGTAAGGAGTGCAGTGAGACCAAGGATT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAAGGTCATGAGGCAGTaGTTGCACATGAACGGGCGG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSKVMRQ*LHMNGR
Trigger: CCGCCCGTTCATGTGCAAGCACTGCCTCATGACCTT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCTTGCCGGAAGCCCTTaGCACAGTCTCTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGLAGSP*HSLCRH
Trigger: ATGTCTGCAGAGACTGTGGCAAGGGCTTCCGGCAAG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCTTGCCGGAAGCCCTTaGCACAGTCTCTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSLAGSP*HSLCRH
Trigger: ATGTCTGCAGAGACTGTGGCAAGGGCTTCCGGCAAG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGGTACTCTTTGGAGTaGACCTCATGGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSWYSLE*TSWMCF
Trigger: GAAGCACATCCATGAGGTGCACTCCAAAGAGTACCA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTGTTCTGCTTTGATGTaGTTCTTGTGCTCAATGGTG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMCSALM*FLCSMV
Trigger: CACCATTGAGCACAAGAAGCACATCAAAGCAGAACA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCATGGAACTTCATATCTaGATGTTCTGCTTTGATGTG +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPMELHI*MFCFDV
Trigger: CACATCAAAGCAGAACATGCAGATATGAAGTTCCAT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGACCAAACGTGACTCCTaGCTCTGTACATGGCAATGT +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILTKRDS*LCTWQC
Trigger: ACATTGCCATGTACAGAGGCAGGAGTCACGTTTGGT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAACCAAACGTGACTCCTaGCTCTGTACATGGCAATGT +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSTKRDS*LCTWQC
Trigger: ACATTGCCATGTACAGAGGCAGGAGTCACGTTTGGT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTGCCATTTTGCCACCTaGAGATCAAGAGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAECHFAT*RSRALP
Trigger: TGGGAGAGCTCTTGATCTGCAGGTGGCAAAATGGCA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGTGGGTTTTCTCTGCTaGCAAGGGGATATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQVGFLC*QGDIQC
Trigger: GCACTGAATATCCCCTTGGCAGCAGAGAAAACCCAC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGAAAGAATTTCTCAGTaGTTGAAAGGATCTGACACT +
Preference number: 4 (lower is better)
Translates to: TAILPTERCRHIMPPGVPERISQ*LKGSDT
Trigger: AGTGTCAGATCCTTTCAAGCACTGAGAAATTCTTTC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGGCATGAAGCTGACATaGCTTCCGTGGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGGMKLT*LPWSVG
Trigger: TCCCACTGACCACGGAAGGCATGTCAGCTTCATGCC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGGGTCAGTAAACTTTTaGTGTTCAGCACCGATTCAA +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMGSVNF*CSAPIQ
Trigger: TTGAATCGGTGCTGAACAGCAAAAGTTTACTGACCC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTTCTGTCAACTAAAGTaGTCTCGGTGCATCGCGCAG +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEFCQLK*SRCIAQ
Trigger: CTGCGCGATGCACCGAGAGCACTTTAGTTGACAGAA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCATTGCAGCACTGGCTaGATGGTACCAACGCTATTC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEHCSTG*MVPTLF
Trigger: GAATAGCGTTGGTACCATGCAGCCAGTGCTGCAATG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGATGCATCGATGGAGATaGTATCTGTGTTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMMHRWR*YLCYPA
Trigger: TGCTGGATAACACAGATACCATCTCCATCGATGCAT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCCACAGATGCATCGATaGAGATGGTATCTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMPQMHR*RWYLCY
Trigger: ATAACACAGATACCATCTCCATCGATGCATCTGTGG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGGCTTGGTTGGACTGTaGTGCTTGGCAAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGGLVGL*CLAKWL
Trigger: CAGCCACTTTGCCAAGCACCACAGTCCAACCAAGCC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGATAATCATCAGGGCTTaGTTGGACTGTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILIIIRA*LDCGAW
Trigger: CCAAGCACCACAGTCCAACCAAGCCCTGATGATTAT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAATAATCATCAGGGCTTaGTTGGACTGTGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSIIIRA*LDCGAW
Trigger: CCAAGCACCACAGTCCAACCAAGCCCTGATGATTAT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGGACTGATTTTTCCATaGCTCTGCTCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQGLIFP*LCSALL
Trigger: GAGCAGTGCTGAGCAGAGCCATGGAAAAATCAGTCC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGGTGGTTCTTCAGGGTaGAATTGGCTGCAAACTTCG +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEGGSSG*NWLQTS
Trigger: CGAAGTTTGCAGCCAATTCCACCCTGAAGAACCACC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCTGAGTGCTTCTTCTTaGTGTGATAGGCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGLSASS*CDRPGR
Trigger: CCGCCCTGGCCTATCACACCAAGAAGAAGCACTCAG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGACAGCATCACAGTACTaGCATGCATACATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMTASQY*HAYIFP
Trigger: AGGGAAAATGTATGCATGCCAGTACTGTGATGCTGT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCACAGCATCACAGTACTaGCATGCATACATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSTASQY*HAYIFP
Trigger: AGGGAAAATGTATGCATGCCAGTACTGTGATGCTGT...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAGGTGTGCAGATGGATaGAGAGGCCATTGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGRCADG*RGHWLA
Trigger: GGCAAGCCAATGGCCTCTCCATCCATCTGCACACCT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAATACGTCAGGGTGGTaGGTTCGATTGTGGTACCAC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAENTSGW*VRLWYH
Trigger: GTGGTACCACAATCGAACCCACCACCCTGACGTATT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGCAAATACGTCAGGGTaGTGGGTTCGATTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQANTSG*WVRLWY
Trigger: GTACCACAATCGAACCCACCACCCTGACGTATTTGC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTGTGCTCAATGGTGTTaGGGAAGGTTTTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILCAQWC*GRFCHR
Trigger: CCTGTGACAAAACCTTCCCCAACACCATTGAGCACA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCACACTGGTCACATTCATaGAACTTCATATCTGCATGT +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPHWSHS*NFISAC
Trigger: ACATGCAGATATGAAGTTCCATGAATGTGACCAGTG...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGAGATGCCTGAGAATCTaGCAACGTCACAAACACCTG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILRCLRI*QRHKHL
Trigger: CAGGTGTTTGTGACGTTGCCAGATTCTCAGGCATCT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCCACGAGCTCAGAGCTaGCCTGAGATGCCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSPRAQS*PEMPEN
Trigger: ATTCTCAGGCATCTCAGGCCAGCTCTGAGCTCGTGG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAATGTGAGATGTGCCTaGAAGGAAGGGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSNVRCA*KEGVAP
Trigger: TGGGGCCACCCCTTCCTTCCAGGCACATCTCACATT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACTTCTGGTCAGTTTTTaGCTTCTGAGGCCGACTCTG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQLLVSF*LLRPTL
Trigger: CAGAGTCGGCCTCAGAAGCCAAAAACTGACCAGAAG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCTACTTGGGAAGCTGTaGCAGGAGGATTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSLLGKL*QEDCVS
Trigger: GCTCACGCAATCCTCCTGCCACAGCTTCCCAAGTAG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAATCACACTCCAGCCTaGAATCTGACTGCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAENHTPA*NLTAFP
Trigger: GGGAAAGGCAGTCAGATTCCAGGCTGGAGTGTGATT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTATGAGTAAAGACCCCTaGTCCCTGCCCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSMSKDP*SLPLWF
Trigger: GAACCAGAGGGGCAGGGACCAGGGGTCTTTACTCAT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGACCCTGCTACTCACTaGGCTCAAAGTTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEDPATH*AQSFPN
Trigger: GTTTGGGAAACTTTGAGCCCAGTGAGTAGCAGGGTC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCAAGCAGAACAGGGCTaGGGTGCTGAACTCACCCTT +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSQAEQG*GAELTL
Trigger: AAGGGTGAGTTCAGCACCCCAGCCCTGTTCTGCTTG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCTCAAGGTACACAAATaGCCCCTAGGACACCAGGCC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGLKVHK*PLGHQA
Trigger: GGCCTGGTGTCCTAGGGGCCATTTGTGTACCTTGAG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACTCTGTGCTCCCTTTTaGCTGCACTGTGTCTACATC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQLCAPF*LHCVYI
Trigger: GATGTAGACACAGTGCAGCCAAAAGGGAGCACAGAG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTCACAAGCTTCTCCATaGCCTCTCTTTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGSQASP*PLFLQG
Trigger: CCCCTGGAGAAAGAGAGGTCATGGAGAAGCTTGTGA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGAAGATCGGTGGTTCTaGGCAGCAAATACGTCAGGG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSEDRWF*AANTSG
Trigger: CCCTGACGTATTTGCTGCTCAGAACCACCGATCTTC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGAGAGATTTCAGCCTTTaGTTAAAGGAAGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMRDFSL*LKEGDE
Trigger: TTCATCCCCTTCCTTTAATCAAAGGCTGAAATCTCT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGCGCTTCAAGCAGGGTaGGACCTGACCATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQALQAG*DLTMWE
Trigger: CTCCCACATGGTCAGGTCTCACCCTGCTTGAAGCGC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGATTGACAAGCTCAAGTaGTCTGCGTATCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLIDKLK*SAYQNV
Trigger: CACATTTTGATACGCAGATCACTTGAGCTTGTCAAT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTATTGACAAGCTCAAGTaGTCTGCGTATCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTIDKLK*SAYQNV
Trigger: CACATTTTGATACGCAGATCACTTGAGCTTGTCAAT...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGGCAGAACCCTAATTaGCAAGCTCAAGTGATCTGC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQWQNPN*QAQVIC
Trigger: GCAGATCACTTGAGCTTGTCAATTAGGGTTCTGCCA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGGGCCAGAGGGCATCTaGTGGGCCCCGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRGPEGI*WAPAAS
Trigger: ACTGGCTGCCGGGGCCCATCAGATGCCCTCTGGCCC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACTTTCTGGGAGTCCCTaGTTGATCCCGCAAATAAAG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQLSGSP*LIPQIK
Trigger: CTTTATTTGCGGGATCAATCAGGGACTCCCAGAAAG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGACGAGAGGAATAGCTaGATGACAACACTGATCCAA +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILDERNS*MTTLIQ
Trigger: TTGGATCAGTGTTGTCATTCAGCTATTCCTCTCGTC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCCATTGCGTCAACTCTaGCCCAAGAACTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGPLRQL*PKNCSS
Trigger: GGAAGAGCAGTTCTTGGGGCAGAGTTGACGCAATGG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCACAGAGTGTACAGCTaGTGCAGCAGCTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQHRVYS*CSSCRL
Trigger: CAGCCGGCAGCTGCTGCAGCAGCTGTACACTCTGTG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTACCAATGGAGATGGTaGAATCACAGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILYQWRW*NHRTAA
Trigger: AGCAGCAGTTCTGTGATTGCACCATCTCCATTGGTA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTGCCCACAGGTAGTTTaGCCGTGTACATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAECPQVV*PCTSFP
Trigger: TGGAAATGATGTACACGGGCAAACTACCTGTGGGCA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCAAGATCAACTGGTTATaGCTCAGGATTGTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPKINWL*LRIVSK
Trigger: TTTAGAAACAATCCTGAGGCATAACCAGTTGATCTT...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAAGGACACCAATGTATaGCAACTCCTGCATGACAGG +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEKDTNV*QLLHDR
Trigger: CCTGTCATGCAGGAGTTGGCATACATTGGTGTCCTT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGCTGTCTTCTTTGGCTaGCTTTTCATCTTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLAVFFG*LFIFFV
Trigger: AACAAAGAAGATGAAAAGGCAGCCAAAGAAGACAGC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGAGAGGCCATTGGCTTaGCGGAAGCCCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQERPLA*RKPLPQ
Trigger: CTGTGGCAAGGGCTTCCGGCAAGCCAATGGCCTCTC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTCATCCTGCACTTCTTaGAGTCATAAGGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLSSCTS*SHKDLL
Trigger: TAGAAGATCCTTATGACTGCAAGAAGTGCAGGATGA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCATATCTGCATGTTCTaGTTTGATGTGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMHICMF*FDVLLV
Trigger: CACAAGAAGCACATCAAAGCAGAACATGCAGATATG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCATATCTGCATGTTCTaGTTTGATGTGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLHICMF*FDVLLV
Trigger: CACAAGAAGCACATCAAAGCAGAACATGCAGATATG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAATGGAACTTCATATCTaGATGTTCTGCTTTGATGTG +
Preference number: 4 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPMELHI*MFCFDV
Trigger: CACATCAAAGCAGAACATGCAGATATGAAGTTCCAT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGTGGGGCCTCCTCTCTaGTGCAAACGCAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQVGPPL*CKRRKA
Trigger: AGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCCCAC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGGTGCTAAGCTAAGATaGTCACCACTCAGGACAGCC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGGAKLR*SPLRTA
Trigger: GGCTGTCCTGAGTGGTGAGCATCTTAGCTTAGCACC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGAAGACCCCTGGTCCCTaGCCCTCTGGTTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQKTPGP*PSGSRF
Trigger: GAACCTGGAACCAGAGGGGCAGGGACCAGGGGTCTT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTACCTGGTACTCACACTaGAGACCCTGCTACTCACTG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSTWYSH*RPCYSL
Trigger: CAGTGAGTAGCAGGGTCTGCAGTGTGAGTACCAGGT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCACCTGGTACTCACACTaGAGACCCTGCTACTCACTG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGTWYSH*RPCYSL
Trigger: CAGTGAGTAGCAGGGTCTGCAGTGTGAGTACCAGGT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGGTACCAATGGAGATaGTGCAATCACAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSWYQWR*CNHRTA
Trigger: AGCAGTTCTGTGATTGCACCATCTCCATTGGTACCA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTTTCCTTTCACATCCTaGTTCTGTGCTTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMFPFTS*FCACLL
Trigger: AAGAAGACAAGCACAGAACCAGGATGTGAAAGGAAA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTTTCCTTTCACATCCTaGTTCTGTGCTTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLFPFTS*FCACLL
Trigger: AAGAAGACAAGCACAGAACCAGGATGTGAAAGGAAA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTGCATGCCTGAGGCATaGGCAAATTCTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSCMPEA*ANSLPQ
Trigger: CTGTGGCAGAGAATTTGCCCATGCCTCAGGCATGCA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTCTTCAGGGTGGAATTaGCTGCAAACTTCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGSSGWN*LQTSPH
Trigger: GTGGGGCGAAGTTTGCAGCCAATTCCACCCTGAAGA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTGGTGGGTTCGATTGTaGTACCACAAACCAGACAAT +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILWWVRL*YHKPDN
Trigger: ATTGTCTGGTTTGTGGTACCACAATCGAACCCACCA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGGAGTGATGAGAACTTaGAAGATCGGTGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQGVMRT*KIGGSE
Trigger: CTCAGAACCACCGATCTTCCAAGTTCTCATCACTCC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGTGCTCAATGGTGTTaGGGAAGGTTTTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQCAQWC*GRFCHR
Trigger: CCTGTGACAAAACCTTCCCCAACACCATTGAGCACA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCACTGGTCACATTCATaGAACTTCATATCTGCATGT +
Preference number: 4 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMHWSHS*NFISAC
Trigger: ACATGCAGATATGAAGTTCCATGAATGTGACCAGTG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGGGCTCAGATGCTGTTaGTTCTATGAGAACAACGAA +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILGLRCC*FYENNE
Trigger: TTCGTTGTTCTCATAGAACCAACAGCATCTGAGCCC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACTGCGTATCAAAATGTaGACAGGACCAGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQLRIKM*TGPEAG
Trigger: ACCTGCTTCTGGTCCTGTCCACATTTTGATACGCAG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCTCATCCACTGGACTTaGCACCAATGCCCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGLIHWT*HQCPVS
Trigger: GCTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCAGCTTGTGAGGGGCTaGATTCTCATCCACTGGACT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGQLVRG*ILIHWT
Trigger: AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATGTCTTGTCACAATCTaGGTCTCCAACAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSCLVTI*VSNRNL
Trigger: CAGGTTTCTGTTGGAGACCCAGATTGTGACAAGACA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATATAAGATCCATGCCTaGGCTTCTCTAGAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSYKIHA*ASLESK
Trigger: CTTGCTCTCTAGAGAAGCCCAGGCATGGATCTTATA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGCCTTCCGTGGTCAGTaGGAAGTCAGAATGCTTCCT +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSAFRGQ*EVRMLP
Trigger: AGGAAGCATTCTGACTTCCCACTGACCACGGAAGGC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCTTCCCTCCCTCCTTTaGTCAATGTGCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSLPSLL*SMCSFQ
Trigger: CTGGAAGCTGCACATTGACCAAAGGAGGGAGGGAAG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CAA 72 bp GTTTTCTCTGCTGCCAAGGGGATATTCAGTGCCATTTaGCCACCTGCAGATCAAGAGCTCTCCCAGACTGAC +
Preference number: 4 (lower is better)
Translates to: VFSAAKGIFSAI*PPADQELSQTD
Trigger: GTCAGTCTGGGAGAGCTCTTGATCTGCAGGTGGCAAAATGGCACTGAATATCCCCTTGGCAGCAGAGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CAA 72 bp GTCCAACTGCCTAGGCCCAATTTAATAACATGCTGCTaGTCTCCCTGGAACCGCCTGCCCACTCTATACATG +
Preference number: 4 (lower is better)
Translates to: VQLPRPNLITCC*SPWNRLPTLYM
Trigger: CATGTATAGAGTGGGCAGGCGGTTCCAGGGAGACAAGCAGCATGTTATTAAATTGGGCCTAGGCAGTTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGAACCATGAGTGCATCTaGGAAGACACCTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILNHECI*EDTFIF
Trigger: GAAAATGAAGGTGTCTTCTCAGATGCACTCATGGTT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGAATTGAAACCACCTaGACCAGAGTCACGTTTCAC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQRIETT*TRVTFH
Trigger: GTGAAACGTGACTCTGGTTCAGGTGGTTTCAATTCT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAGAATTGAAACCACCTaGACCAGAGTCACGTTTCAC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAERIETT*TRVTFH
Trigger: GTGAAACGTGACTCTGGTTCAGGTGGTTTCAATTCT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTTCGTATTTCCTCCATaGGCAGGTCCAATGGACAGG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGFVFPP*AGPMDR
Trigger: CCTGTCCATTGGACCTGCTCATGGAGGAAATACGAA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTTGTTGGCTTCAAGGTaGAATTTATTACTCACCTTC +
Preference number: 4 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLLLASR*NLLLTF
Trigger: GAAGGTGAGTAATAAATTTCACCTTGAAGCCAACAA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTTGTTGGCTTCAAGGTaGAATTTATTACTCACCTTC +
Preference number: 4 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSLLASR*NLLLTF
Trigger: GAAGGTGAGTAATAAATTTCACCTTGAAGCCAACAA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCATGGTACTGCATGCCTaGGGCATGGGCAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGMVLHA*GMGKFS
Trigger: AGAGAATTTGCCCATGCCTCAGGCATGCAGTACCAT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGCTCAGATTCCAGGTaGCTGTCAAGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQCSDSR*LSSWAW
Trigger: CCAGGCCCAGCTTGACAGTCACCTGGAATCTGAGCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGCCATTCTGCCCACTaGGCGCTGTCGGCACATCAT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQCHSAH*ALSAHH
Trigger: ATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGACACTGTCTAGCAGCTaGTGCCTCACATTAAACACT +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAETLSSS*CLTLNT
Trigger: AGTGTTTAATGTGAGGCATCAGCTGCTAGACAGTGT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAAGCAGGGTGAGACCTaGCCATGTGGGAGCAATAAA +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSKQGET*PCGSNK
Trigger: TTTATTGCTCCCACATGGTCAGGTCTCACCCTGCTT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACCCTTCACATGGAGATaGAGTCTTAAAGGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQPFTWR*SLKGLS
Trigger: GCTCAAACCTTTAAGACTTCATCTCCATGTGAAGGG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGATTTTGGAGAAGTTGTaGTTGCCCACAGGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILILEKL*LPTGSL
Trigger: CAAACTACCTGTGGGCAAGCACAACTTCTCCAAAAT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTCCGTGGTGACATGGTaGTGCAATGCTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGSVVTW*CNAPGK
Trigger: TTTTCCTGGAGCATTGCAGCACCATGTCACCACGGA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCAGCTCCCATCCCACTaGTCTTTCAGACTCTACTTC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSQLPSH*SFRLYF
Trigger: GAAGTAGAGTCTGAAAGAGCAGTGGGATGGGAGCTG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAAAGGATCACTGACCTaGAATAAGTGTGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSKGSLT*NKCGGL
Trigger: CAGGCCGCCACACTTATTGCAGGTCAGTGATCCTTT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTATTCAGTGCCATTTTaGCACCTGCAGATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEYSVPF*HLQIKS
Trigger: GCTCTTGATCTGCAGGTGGCAAAATGGCACTGAATA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAGTGGGAAGTCAGAATaGTTCCTCAGAGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGSGKSE*FLRGDL
Trigger: CAGGTCTCCTCTGAGGAAGCATTCTGACTTCCCACT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATCTTGTGAAACTGAATaGGCTGCTTCCTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQSCETE*AASSVS
Trigger: TGAGACTGAGGAAGCAGCCCATTCAGTTTCACAAGA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGTCGTCTTCACAGCCTaGAGGAGTTTTACCAAACCC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSVVFTA*RSFTKP
Trigger: GGGTTTGGTAAAACTCCTCCAGGCTGTGAAGACGAC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTGGTGCTTGGCAAAGTaGCTGATTTCTGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEWCLAK*LISATS
Trigger: AGAAGTTGCAGAAATCAGCCACTTTGCCAAGCACCA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTCATCAGGGCTTGGTTaGACTGTGGTGCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSSSGLG*TVVLGK
Trigger: TTTGCCAAGCACCACAGTCCAACCAAGCCCTGATGA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGGATTGTTTCTAAAGTaGCATGTTCTGGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEGLFLK*HVLGWS
Trigger: TGACCACCCCAGAACATGCCACTTTAGAAACAATCC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGCCTCCAAGATCAACTaGTTATGCCTCAGGATTGTT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQASKIN*LCLRIV
Trigger: AACAATCCTGAGGCATAACCAGTTGATCTTGGAGGC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTACTCAATCTTCTGTTaGATGGCCTCCAAGATCAAC +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILYSIFC*MASKIN
Trigger: GTTGATCTTGGAGGCCATCCAACAGAAGATTGAGTA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGAGGTCACATGTCACTaGAAGCCTCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQEVTCH*KPLLLL
Trigger: AAGAAGAAGAAGAGGCTTCCAGTGACATGTGACCTC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAGGGGTGGTACTCTTTaGAGTGCACCTCATGGATGT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGRGGTL*SAPHGC
Trigger: ACATCCATGAGGTGCACTCCAAAGAGTACCACCCCT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAATACGTCAGGGTGGTaGGTTCGATTGTGGTACCAC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGNTSGW*VRLWYH
Trigger: GTGGTACCACAATCGAACCCACCACCCTGACGTATT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGCAGCAAGGCTGGCGTaGGGAAGAGCTCCTTACACT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQAARLA*GRAPYT
Trigger: AGTGTAAGGAGCTCTTCCCCACGCCAGCCTTGCTGC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACGGGGCCACCGGCTCTaGGGTTTGGATCACCTGCGC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRRGHRL*GLDHLR
Trigger: GCGCAGGTGATCCAAACCCCAGAGCCGGTGGCCCCG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACCAAGAAGAATGTCCTaGAAAGGCAGACACTGTCTA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQPRRMS*KGRHCL
Trigger: TAGACAGTGTCTGCCTTTCCAGGACATTCTTCTTGG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGACAGGACTGCCTGCCTaGTGCTGGTCACAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQTGLPA*CWSQSA
Trigger: TGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTGGATTCTCATCCACTaGACTTGGCACCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSWILIH*TWHQCP
Trigger: AGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGCCCACTCTATACATaGTTAGCACTTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGCPLYT*LALPSL
Trigger: GAGGGAGGGAAGTGCTAACCATGTATAGAGTGGGCA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTGCCCACTCTATACATaGTTAGCACTTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSCPLYT*LALPSL
Trigger: GAGGGAGGGAAGTGCTAACCATGTATAGAGTGGGCA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGCTGCTTGTCTCCCTaGAACCGCCTGCCCACTCTA +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQCCLSP*NRLPTL
Trigger: TAGAGTGGGCAGGCGGTTCCAGGGAGACAAGCAGCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGCAGGATTAGAATATTaGTACAGCCTCAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQAGLEY*YSLNRD
Trigger: GTCCCTGTTGAGGCTGTACCAATATTCTAATCCTGC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACTGATATCAGAGAATTaGAACCACCTGAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQLISEN*NHLNQS
Trigger: ACTCTGGTTCAGGTGGTTTCAATTCTCTGATATCAG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGGCAGTGCTTGCACATaGACGGGCGGTCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRGSACT*TGGPRC
Trigger: ACACCGGGGACCGCCCGTTCATGTGCAAGCACTGCC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCATCTGTTTTCTAGGTaGGACTGTGTTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGHLFSR*DCVGWC
Trigger: GCACCAACCAACACAGTCTCACCTAGAAAACAGATG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGAGAGATTTCAGCCTTTaGTTAAAGGAAGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILRDFSL*LKEGDE
Trigger: TTCATCCCCTTCCTTTAATCAAAGGCTGAAATCTCT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGGCAGAACCCTAATTaGCAAGCTCAAGTGATCTGC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGWQNPN*QAQVIC
Trigger: GCAGATCACTTGAGCTTGTCAATTAGGGTTCTGCCA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTCAGTTTTTGGCTTCTaGGGCCGACTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSSVFGF*GRLCFR
Trigger: TCTAAAGCAGAGTCGGCCTCAGAAGCCAAAAACTGA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAAGCAGGAGAAACTCTaGATAGTCAGTAAGACCAGA +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQKQEKL*IVSKTR
Trigger: TCTGGTCTTACTGACTATTCAGAGTTTCTCCTGCTT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTGCCCACAGGTAGTTTaGCCGTGTACATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSCPQVV*PCTSFP
Trigger: TGGAAATGATGTACACGGGCAAACTACCTGTGGGCA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTGTGCTTGTCTTCTTTaGCTCACTAAAGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAECACLL*LTKGLH
Trigger: GTGCAAACCTTTAGTGAGGCAAAGAAGACAAGCACA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTTGGTTGGACTGTGGTaGTTGGCAAAGTGGCTGATT +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSLVGLW*LAKWLI
Trigger: AATCAGCCACTTTGCCAAGCACCACAGTCCAACCAA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGACAGTCTCTGCCAGGTaGTCCTCCTCCGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQTVSAR*SSSEVK
Trigger: CTTTACCTCGGAGGAGGAGCACCTGGCAGAGACTGT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAAGGACACCAATGTATaGCAACTCCTGCATGACAGG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSKDTNV*QLLHDR
Trigger: CCTGTCATGCAGGAGTTGGCATACATTGGTGTCCTT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTCATCCTGCACTTCTTaGAGTCATAAGGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILSSCTS*SHKDLL
Trigger: TAGAAGATCCTTATGACTGCAAGAAGTGCAGGATGA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGGTACTCTTTGGAGTaGACCTCATGGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGWYSLE*TSWMCF
Trigger: GAAGCACATCCATGAGGTGCACTCCAAAGAGTACCA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTGTTCTGCTTTGATGTaGTTCTTGTGCTCAATGGTG +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAECSALM*FLCSMV
Trigger: CACCATTGAGCACAAGAAGCACATCAAAGCAGAACA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGCCCTGTAAGCATGTaGCACTCTACGATCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGCPVSM*HSTIFQ
Trigger: CTGAAAGATCGTAGAGTGGCACATGCTTACAGGGCA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGAGCCTGGAATCTGACTaGCTTTCCCTCCTCACCACC +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQSLESD*LSLLTT
Trigger: GGTGGTGAGGAGGGAAAGGCAGTCAGATTCCAGGCT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGAGTGGCAGCAAGCTCTaGGGAAGAATGAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQSGSKL*GRMRLS
Trigger: GGAGAGCCTCATTCTTCCCCAGAGCTTGCTGCCACT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATACTCAATCTTCTGTTaGATGGCCTCCAAGATCAAC +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQYSIFC*MASKIN
Trigger: GTTGATCTTGGAGGCCATCCAACAGAAGATTGAGTA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTCACAGGAGCTGCACTaGAGTGATGAGAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGSQELH*SDENLE
Trigger: TTCCAAGTTCTCATCACTCCAGTGCAGCTCCTGTGA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGTGCTCAATGGTGTTaGGGAAGGTTTTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGCAQWC*GRFCHR
Trigger: CCTGTGACAAAACCTTCCCCAACACCATTGAGCACA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTATTCTCCTTCCTTTCTaGGAGTCCCTGATTGATCCC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSILLPF*ESLIDP
Trigger: GGGATCAATCAGGGACTCCCAGAAAGGAAGGAGAAT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CAA 72 bp GATCAACGTGCCTCTGACACTCCCTTCAGCCCCAAATaGTTCTCTTACTCCCATTTTCTTCCTACCTCCCAA +
Preference number: 4 (lower is better)
Translates to: DQRASDTPFSPK*FSYSHFLPTSQ
Trigger: TTGGGAGGTAGGAAGAAAATGGGAGTAAGAGAACAATTTGGGGCTGAAGGGAGTGTCAGAGGCACGTTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTCCAGCACCTTCAGATaGAAGGATTTCTACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGSSTFR*KDFYLR
Trigger: CCTCAAGTAGAAATCCTTTCATCTGAAGGTGCTGGA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGTTTTGGGAAGAGCTaGCAACTGACAAGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGCFGKS*QLTRGY
Trigger: ATAACCCCTTGTCAGTTGTCAGCTCTTCCCAAAACA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTACACTGTCTAGCAGCTaGTGCCTCACATTAAACACT +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSTLSSS*CLTLNT
Trigger: AGTGTTTAATGTGAGGCATCAGCTGCTAGACAGTGT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATCACCACCTGGGCCATaGGCTCTGGGAGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRSPPGP*ALGAEV
Trigger: GACCTCTGCTCCCAGAGCTCATGGCCCAGGTGGTGA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGCCCCGAAGTTTCCATaGCAACAAAACAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSAPKFP*QQNKDQ
Trigger: TTGATCCTTGTTTTGTTGTCATGGAAACTTCGGGGC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGACATCACAGTCCATTTaGAACTCATGTAGCCTAATT +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILTSQSI*NSCSLI
Trigger: AATTAGGCTACATGAGTTTCAAATGGACTGTGATGT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTACCAATGGAGATGGTaGAATCACAGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGYQWRW*NHRTAA
Trigger: AGCAGCAGTTCTGTGATTGCACCATCTCCATTGGTA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGGAGAAGTTGTGCTTaGCCACAGGTAGTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQWRSCA*PQVVCP
Trigger: CGGGCAAACTACCTGTGGGCAAGCACAACTTCTCCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTCTGTCTCAGAGGGAATaGTCAGAATCTCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSLSQRE*SESLSQ
Trigger: CTGTGAAAGAGATTCTGAGCATTCCCTCTGAGACAG...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCTGTCTCAGAGGGAATaGTCAGAATCTCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGLSQRE*SESLSQ
Trigger: CTGTGAAAGAGATTCTGAGCATTCCCTCTGAGACAG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGTCAGCTTATGGTACTaGATGCCTGAGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQVSLWY*MPEAWA
Trigger: TGCCCATGCCTCAGGCATGCAGTACCATAAGCTGAC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTTGATGTGCTTCTTGTaGTCAATGGTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSLMCFL*SMVLGK
Trigger: CTTCCCCAACACCATTGAGCACAAGAAGCACATCAA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGATGGAACTTCATATCTaGATGTTCTGCTTTGATGTG +
Preference number: 4 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILMELHI*MFCFDV
Trigger: CACATCAAAGCAGAACATGCAGATATGAAGTTCCAT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTCTGACTGCTTGAAGTaGTCCGTGGTGACATGGTGC +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQSDCLK*SVVTWC
Trigger: GCACCATGTCACCACGGAGCACTTCAAGCAGTCAGA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAGTAAATGGTACCAATaGAGATGGTGCAATCACAGA +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAESKWYQ*RWCNHR
Trigger: TCTGTGATTGCACCATCTCCATTGGTACCATTTACT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTCTTGTGAAACTGAATaGGCTGCTTCCTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGSCETE*AASSVS
Trigger: TGAGACTGAGGAAGCAGCCCATTCAGTTTCACAAGA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTCTCCTGGGCTGTaGGAGAATTCACACTCATCT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQGSPGL*ENSHSS
Trigger: AGATGAGTGTGAATTCTCCCACAGCCCAGGAGAGCC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGCTGGCTGTCTTCTTTaGCTGCCTTTTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSAGCLL*LPFHLL
Trigger: AAGAAGATGAAAAGGCAGCCAAAGAAGACAGCCAGC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGAGGTCACATGTCACTaGAAGCCTCTTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGEVTCH*KPLLLL
Trigger: AAGAAGAAGAAGAGGCTTCCAGTGACATGTGACCTC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCCCACACTTGCTCCCTaGGAAGGAGGGTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQPTLAP*EGGFRN
Trigger: ATTCCTAAACCCTCCTTCCCAGGGAGCAAGTGTGGG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAACCATGAGTGCATCTaGGAAGACACCTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGNHECI*EDTFIF
Trigger: GAAAATGAAGGTGTCTTCTCAGATGCACTCATGGTT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGTCCTGTTCCATAACTaGCCCCAGTATTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQVLFHN*PQYSHR
Trigger: TCTGTGGGAATACTGGGGTCAGTTATGGAACAGGAC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAACATCACAGTCCATTTaGAACTCATGTAGCCTAATT +
Preference number: 4 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQTSQSI*NSCSLI
Trigger: AATTAGGCTACATGAGTTTCAAATGGACTGTGATGT...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAAAGTGGCTGATTTCTaGAACTTCTCTAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSKVADF*NFSSRR
Trigger: CCTTCTGCTAGAGAAGTTGCAGAAATCAGCCACTTT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAAGATCAACTGGTTATaGCTCAGGATTGTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSKINWL*LRIVSK
Trigger: TTTAGAAACAATCCTGAGGCATAACCAGTTGATCTT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATCCAAAGTGATCACCTaGTCTGTCGGGGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRSKVIT*SVGATG
Trigger: GCCGGTGGCCCCGACAGAGCAGGTGATCACTTTGGA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGGGCCTCCTCTCTGCTaGAAACGCAGGAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRGPPLC*KRRKAL
Trigger: CAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACACAAAGCCGGCAGATaGCAGTCAGTGGGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRHKAGR*QSVGVL
Trigger: CAGCACGCCCACTGACTGGCATCTGCCGGCTTTGTG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGAAAGAATTTCTCAGTaGTTGAAAGGATCTGACACT +
Preference number: 4 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEERISQ*LKGSDT
Trigger: AGTGTCAGATCCTTTCAAGCACTGAGAAATTCTTTC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACTGTGGCAGGAGGATTaGGTGAGCCCGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRLWQED*VSPQRL
Trigger: CAACCTCTGCGGGCTCACGCAATCCTCCTGCCACAG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAATTTAATAACATGCTaGTTGTCTCCCTGGAACCGC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSNLITC*LSPWNR
Trigger: GCGGTTCCAGGGAGACAAGCAGCATGTTATTAAATT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCATGCATCGATGGAGATaGTATCTGTGTTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGMHRWR*YLCYPA
Trigger: TGCTGGATAACACAGATACCATCTCCATCGATGCAT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCATGAGCAGGTCCAATaGACAGGTCTTTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQHEQVQ*TGLCLL
Trigger: CAGGAGACAAAGACCTGTCCATTGGACCTGCTCATG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGCTCTGTCAGCTTATaGTACTGCATGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQCSVSL*YCMPEA
Trigger: TGCCTCAGGCATGCAGTACCATAAGCTGACAGAGCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGTGGTTCTTCAGGGTaGAATTGGCTGCAAACTTCG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQGGSSG*NWLQTS
Trigger: CGAAGTTTGCAGCCAATTCCACCCTGAAGAACCACC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAAGAGCTCCTTACACTaGTCACATTCATGGAACTTC +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSKSSLH*SHSWNF
Trigger: GAAGTTCCATGAATGTGACCAGTGTAAGGAGCTCTT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGCAGGTGTAGTCGGCTaGGATGAGCTGTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRAGVVG*DELSQA
Trigger: AGCCTGGGACAGCTCATCCCAGCCGACTACACCTGC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGGATTCTCATCCACTaGACTTGGCACCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQWILIH*TWHQCP
Trigger: AGGGCATTGGTGCCAAGTCCAGTGGATGAGAATCCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCTGACATGCCTTCCGTaGTCAGTGGGAAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQLTCLP*SVGSQN
Trigger: ATTCTGACTTCCCACTGACCACGGAAGGCATGTCAG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCAAGCTTGTGAGCCCTaGAGTAAATGGTACCAATGG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQQACEP*SKWYQW
Trigger: CCATTGGTACCATTTACTTCAGGGCTCACAAGCTTG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATGCTGGCACTTGACATaGACCTGCAGCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRCWHLT*TCSKAG
Trigger: GCCAGCCTTGCTGCAGGTTCATGTCAAGTGCCAGCA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGTTTGTGCCTTCTGCTaGGTGTGCCATGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRVCAFC*VCHGPE
Trigger: CTCTGGCCCATGGCACACTCAGCAGAAGGCACAAAC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGACATGGTGCTGCAATaGTCCAGGAAAACGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQDMVLQ*SRKTES
Trigger: ACTTTCCGTTTTCCTGGAGCATTGCAGCACCATGTC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGAGTGATGAGAACTTaGAAGATCGGTGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQGVMRT*KIGGSE
Trigger: CTCAGAACCACCGATCTTCCAAGTTCTCATCACTCC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCACTGGTCACATTCATaGAACTTCATATCTGCATGT +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGHWSHS*NFISAC
Trigger: ACATGCAGATATGAAGTTCCATGAATGTGACCAGTG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAAAGCACCGGAATGGCTaGGACCCTGAATGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRKHRNG*DPECWH
Trigger: GTGCCAGCATTCAGGGTCCCAGCCATTCCGGTGCTT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAAATGGCCAGAGGCAGTaGCAGCATTTGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRNGQRQ*QHLQPP
Trigger: TGGGGGCTGCAAATGCTGCCACTGCCTCTGGCCATT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGCAGACAGCCCTGCCTaGTGTGTAAACACCGCACCA +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRADSPA*CVNTAP
Trigger: TGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCTGCGTATCAAAATGTaGACAGGACCAGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQLRIKM*TGPEAG
Trigger: ACCTGCTTCTGGTCCTGTCCACATTTTGATACGCAG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CAA 72 bp GCTGCAAATCTGGTGATTCCGAAGAAAACAAATGTCTaGTCACAATCTGGGTCTCCAACAGAAACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AANLVIPKKTNV*SQSGSPTETWP
Trigger: TGGCCAGGTTTCTGTTGGAGACCCAGATTGTGACAAGACATTTGTTTTCTTCGGAATCACCAGATTTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGATCTTCTATGTTGTaGAAGGTGTGCAGATGGATG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQGSSML*KVCRWM
Trigger: CATCCATCTGCACACCTTTCACAACATAGAAGATCC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGAAGTCTTAAAGGTTTaGGCACCATCTTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQEVLKV*APSSGQ
Trigger: CTGACCAGAAGATGGTGCTCAAACCTTTAAGACTTC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGAGCACCGATTCAAACTaGCGTTCTTTATTGACAGCG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQSTDSN*RSLLTA
Trigger: CGCTGTCAATAAAGAACGGCAGTTTGAATCGGTGCT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGGGGAAACTCATCCTaGACTTCTTGCAGTCATAAG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQWGNSS*TSCSHK
Trigger: CTTATGACTGCAAGAAGTGCAGGATGAGTTTCCCCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGAAAGAATTTCTCAGTaGTTGAAAGGATCTGACACT +
Preference number: 4 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSERISQ*LKGSDT
Trigger: AGTGTCAGATCCTTTCAAGCACTGAGAAATTCTTTC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACCAGCACTGGGTTTGTaGCTTCTGCTGAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRPALGL*LLLSVP
Trigger: TGGCACACTCAGCAGAAGGCACAAACCCAGTGCTGG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGGTGCTTGGCAAAGTaGCTGATTTCTGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQWCLAK*LISATS
Trigger: AGAAGTTGCAGAAATCAGCCACTTTGCCAAGCACCA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGCAATCTTCTGTTGGATaGCCTCCAAGATCAACTGGT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQQSSVG*PPRSTG
Trigger: ACCAGTTGATCTTGGAGGCCATCCAACAGAAGATTG...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGCTGGCTGTCTTCTTTaGCTGCCTTTTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQAGCLL*LPFHLL
Trigger: AAGAAGATGAAAAGGCAGCCAAAGAAGACAGCCAGC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATTTGGGAGGCCCAGGTaGGAGAACTGCTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRFGRPR*ENCLSS
Trigger: TGAGCTCAAGCAGTTCTCCCACCTGGGCCTCCCAAA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAATGAGTAAAGACCCCTaGTCCCTGCCCCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRMSKDP*SLPLWF
Trigger: GAACCAGAGGGGCAGGGACCAGGGGTCTTTACTCAT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACTCAAGGTACACAAATaGCCCCTAGGACACCAGGCC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRLKVHK*PLGHQA
Trigger: GGCCTGGTGTCCTAGGGGCCATTTGTGTACCTTGAG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGAAGATCGGTGGTTCTaGGCAGCAAATACGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRREDRWF*AANTSG
Trigger: CCCTGACGTATTTGCTGCTCAGAACCACCGATCTTC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACATGGTGACCAAACGTaGCTCCTGCCTCTGTACATG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRHGDQT*LLPLYM
Trigger: CATGTACAGAGGCAGGAGTCACGTTTGGTCACCATG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGGGGCTCACCACAGATaGATCGATGGAGATGGTATC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRGAHHR*IDGDGI
Trigger: GATACCATCTCCATCGATGCATCTGTGGTGAGCCCC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGATTTTGGAGAAGTTGTaGTTGCCCACAGGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQILEKL*LPTGSL
Trigger: CAAACTACCTGTGGGCAAGCACAACTTCTCCAAAAT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAAGATCAACTGGTTATaGCTCAGGATTGTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGKINWL*LRIVSK
Trigger: TTTAGAAACAATCCTGAGGCATAACCAGTTGATCTT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAATGTATGCCAACTCCTaGATGACAGGCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRMYANS*MTGCRP
Trigger: AGGCCTGCAGCCTGTCATGCAGGAGTTGGCATACAT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGTCAGCTTATGGTACTaGATGCCTGAGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRVSLWY*MPEAWA
Trigger: TGCCCATGCCTCAGGCATGCAGTACCATAAGCTGAC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACTCCCTGGAACCGCCTaGCCACTCTATACATGGTTA +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRLPGTA*PLYTWL
Trigger: TAACCATGTATAGAGTGGGCAGGCGGTTCCAGGGAG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATTCCTCTGGCTCTCCTaGGCTGTGGGAGAATTCACA +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRFLWLS*AVGEFT
Trigger: TGTGAATTCTCCCACAGCCCAGGAGAGCCAGAGGAA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACTTCCCTCCCTCCTTTaGTCAATGTGCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRLPSLL*SMCSFQ
Trigger: CTGGAAGCTGCACATTGACCAAAGGAGGGAGGGAAG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATTCGTATTTCCTCCATaGGCAGGTCCAATGGACAGG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRFVFPP*AGPMDR
Trigger: CCTGTCCATTGGACCTGCTCATGGAGGAAATACGAA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAACTCCAAAGGATCACTaGCCTGCAATAAGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRTPKDH*PAISVA
Trigger: CGCCACACTTATTGCAGGTCAGTGATCCTTTGGAGT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGGACTGATTTTTCCATaGCTCTGCTCAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRGLIFP*LCSALL
Trigger: GAGCAGTGCTGAGCAGAGCCATGGAAAAATCAGTCC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATTTCTCTTGCTGTCCTaGCAAGGAACCAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRFLLLS*QGTSLS
Trigger: GGAGAGACTGGTTCCTTGCCAGGACAGCAAGAGAAA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAAAGGGCAGCAGCCTATaGGGAACGAGGCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRKGSSL*GTRQKQ
Trigger: TTGTTTTTGCCTCGTTCCCCATAGGCTGCTGCCCTT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACCTCCCAAGTATCACTaGGATACAAGCAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRPPKYH*DTSRTG
Trigger: CCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
3UTR CAA 72 bp GGCCTTGGTAAAGGAAATGACACACATTCCCCCAATTaGGAAGCAATCTTAATTAGCCAGGGAGTGATTTTT +
Preference number: 4 (lower is better)
Translates to: GLGKGNDTHSPN*EAILISQGVIF
Trigger: AAAAATCACTCCCTGGCTAATTAAGATTGCTTCCAAATTGGGGGAATGTGTGTCATTTCCTTTACCAAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGTGCTTGAAAGGATCTaGCACTGGAATTCAAAATTT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQVLERI*HWNSKF
Trigger: AAATTTTGAATTCCAGTGTCAGATCCTTTCAAGCAC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGACATCACAGTCCATTTaGAACTCATGTAGCCTAATT +
Preference number: 4 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQTSQSI*NSCSLI
Trigger: AATTAGGCTACATGAGTTTCAAATGGACTGTGATGT...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACTCGGCACAGTAAGCTaGAAATCTGGTGATTCCGAA +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRLGTVS*KSGDSE
Trigger: TTCGGAATCACCAGATTTGCAGCTTACTGTGCCGAG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGTGCTCCCTTTTGGCTaGACTGTGTCTACATCTTCT +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRVLPFG*TVSTSS
Trigger: AGAAGATGTAGACACAGTGCAGCCAAAAGGGAGCAC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAAGATGCCTGAGAATCTaGCAACGTCACAAACACCTG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRRCLRI*QRHKHL
Trigger: CAGGTGTTTGTGACGTTGCCAGATTCTCAGGCATCT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAATTCTCCTTCCTTTCTaGGAGTCCCTGATTGATCCC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRILLPF*ESLIDP
Trigger: GGGATCAATCAGGGACTCCCAGAAAGGAAGGAGAAT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGAAGTCTTAAAGGTTTaGGCACCATCTTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRREVLKV*APSSGQ
Trigger: CTGACCAGAAGATGGTGCTCAAACCTTTAAGACTTC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACCCTTCACATGGAGATaGAGTCTTAAAGGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRPFTWR*SLKGLS
Trigger: GCTCAAACCTTTAAGACTTCATCTCCATGTGAAGGG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAGCCTCCAAGATCAACTaGTTATGCCTCAGGATTGTT +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRASKIN*LCLRIV
Trigger: AACAATCCTGAGGCATAACCAGTTGATCTTGGAGGC...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACAATCTTCTGTTGGATaGCCTCCAAGATCAACTGGT +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRQSSVG*PPRSTG
Trigger: ACCAGTTGATCTTGGAGGCCATCCAACAGAAGATTG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR TCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAATGCTGTTGGTTCTATaGGAACAACGAAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRMLLVL*EQRSFH
Trigger: ATGGAAGCTTCGTTGTTCTCATAGAACCAACAGCAT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAATTTTGGAGAAGTTGTaGTTGCCCACAGGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRILEKL*LPTGSL
Trigger: CAAACTACCTGTGGGCAAGCACAACTTCTCCAAAAT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACCACAGATGCATCGATaGAGATGGTATCTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRPQMHR*RWYLCY
Trigger: ATAACACAGATACCATCTCCATCGATGCATCTGTGG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATCATCCTGCACTTCTTaGAGTCATAAGGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRSSCTS*SHKDLL
Trigger: TAGAAGATCCTTATGACTGCAAGAAGTGCAGGATGA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR GCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACATATCTGCATGTTCTaGTTTGATGTGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRHICMF*FDVLLV
Trigger: CACAAGAAGCACATCAAAGCAGAACATGCAGATATG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGAAGTAAATGGTACCAATaGAGATGGTGCAATCACAGA +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRSKWYQ*RWCNHR
Trigger: TCTGTGATTGCACCATCTCCATTGGTACCATTTACT...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CCA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATTTCCTTTCACATCCTaGTTCTGTGCTTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRFPFTS*FCACLL
Trigger: AAGAAGACAAGCACAGAACCAGGATGTGAAAGGAAA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCAGAAGGCGGCCATCTaGAGGCCGGCGCGCAATGGG +
Preference number: 5 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGQKAAI*RPARNG
Trigger: CCCATTGCGCGCCGGCCTCAAGATGGCCGCCTTCTG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCAGAAGGCGGCCATCTaGAGGCCGGCGCGCAATGGG +
Preference number: 5 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPQKAAI*RPARNG
Trigger: CCCATTGCGCGCCGGCCTCAAGATGGCCGCCTTCTG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp AACACCTGCGACCCGGCAAGCTGGGTCTCCTCCAAAGTGATCACCTaGTCTGTCGGGGCCACCGGCTCTGGGGTTTGGATCACCTGCGCC +
Preference number: 5 (lower is better)
Translates to: NTCDPASWVSSKVIT*SVGATGSGVWITCA
Trigger: GGCGCAGGTGATCCAAACCCCAGAGCCGGTGGCCCCGACAGAGCAGGTGATCACTTTGGAGGAGACCCAGCTTGCCGGGTCGCAGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGTCATGAGGCAGTGCTaGCACATGAACGGGCGGTCC +
Preference number: 5 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGVMRQC*HMNGRS
Trigger: GGACCGCCCGTTCATGTGCAAGCACTGCCTCATGAC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp CAGATCCCGCAGCTGAAGGGCTTCCCTCCAACGTGGGTCACCACGTaGCGCTCCAGCATGGACGGGGCACTGAAGATCTTCCCACACGTG +
Preference number: 5 (lower is better)
Translates to: QIPQLKGFPPTWVTT*RSSMDGALKIFPHV
Trigger: CACGTGTGGGAAGATCTTCAGTGCCCCGTCCATGCTGGAGCGGCACGTGGTGACCCACGTTGGAGGGAAGCCCTTCAGCTGCGGGATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCAGAAGGCGGCCATCTaGAGGCCGGCGCGCAATGGG +
Preference number: 5 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSQKAAI*RPARNG
Trigger: CCCATTGCGCGCCGGCCTCAAGATGGCCGCCTTCTG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTGCCTCACTAAAGGTTaGCACAGCAGGGGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGCLTKG*HSRGGG
Trigger: TCCCCCTCCCCTGCTGTGCAAACCTTTAGTGAGGCA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGGAGAGGCCATTGGCTaGCCGGAAGCCCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPGEAIG*PEALAT
Trigger: TGTGGCAAGGGCTTCCGGCAAGCCAATGGCCTCTCC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGGAGAGGCCATTGGCTaGCCGGAAGCCCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSGEAIG*PEALAT
Trigger: TGTGGCAAGGGCTTCCGGCAAGCCAATGGCCTCTCC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCCTAAGGTCCCCGAATaGTCTGTTGGTGCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGPKVPE*SVGAPL
Trigger: GAGAGGGGCACCAACAGACAATTCGGGGACCTTAGG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGTGGTCTCTGACTGCTaGAAGTGCTCCGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGVVSDC*KCSVVT
Trigger: TGTCACCACGGAGCACTTCAAGCAGTCAGAGACCAC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGAGGCAGTGGCAGCATTaGCAGCCCCCACTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMRQWQH*QPPLWA
Trigger: GGCCCACAGTGGGGGCTGCAAATGCTGCCACTGCCT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp ACGTCACAAACACCTGCGACCCGGCAAGCTGGGTCTCCTCCAAAGTaGTCACCTGCTCTGTCGGGGCCACCGGCTCTGGGGTTTGGATCA +
Preference number: 5 (lower is better)
Translates to: TSQTPATRQAGSPPK*SPALSGPPALGFGS
Trigger: TGATCCAAACCCCAGAGCCGGTGGCCCCGACAGAGCAGGTGATCACTTTGGAGGAGACCCAGCTTGCCGGGTCGCAGGTGTTTGTGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp CAAGTCCTCCACAGTCACCGCCACGAGCTCAGAGCTGGCCTGAGATaGCTGAGAATCTGGCAACGTCACAAACACCTGCGACCCGGCAAG +
Preference number: 5 (lower is better)
Translates to: QVLHSHRHELRAGLR*LRIWQRHKHLRPGK
Trigger: CTTGCCGGGTCGCAGGTGTTTGTGACGTTGCCAGATTCTCAGGCATCTCAGGCCAGCTCTGAGCTCGTGGCGGTGACTGTGGAGGACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp GGCAAGCTGTGGGGCCTCCTCTCTGCTGCAAACGCAGGAAGGCTCTaGCGGATGAAAGGCTGCTCATTTGGCCTCACCACAGATCAGCGT +
Preference number: 5 (lower is better)
Translates to: GKLWGLLSAANAGRL*RMKGCSFGLTTDQR
Trigger: ACGCTGATCTGTGGTGAGGCCAAATGAGCAGCCTTTCATCCGGCAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCCCACAGCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTTGCCCACAGGTAGTTaGCCCGTGTACATCATTTCC +
Preference number: 5 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGLPTGS*PVYIIS
Trigger: GGAAATGATGTACACGGGCAAACTACCTGTGGGCAA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGCAGAAGGCCCAGGTTaGGGAAAGTCGTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSAEGPG*GKSSSQ
Trigger: CTGTGAAGACGACTTTCCCAAACCTGGGCCTTCTGC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCTTACACTGCACCTGTTaGCTCTTAGCCACCCGGCAG +
Preference number: 5 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSLHCTC*LLATRQ
Trigger: CTGCCGGGTGGCTAAGAGCAAACAGGTGCAGTGTAA...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGTCATGAGGCAGTGCTaGCACATGAACGGGCGGTCC +
Preference number: 5 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLVMRQC*HMNGRS
Trigger: GGACCGCCCGTTCATGTGCAAGCACTGCCTCATGAC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGCTTGCCGGAAGCCCTaGCCACAGTCTCTGCAGACA +
Preference number: 5 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLACRKP*PQSLQT
Trigger: TGTCTGCAGAGACTGTGGCAAGGGCTTCCGGCAAGC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCAGGGGTGGTACTCTTaGGAGTGCACCTCATGGATG +
Preference number: 5 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSQGWYS*ECTSWM
Trigger: CATCCATGAGGTGCACTCCAAAGAGTACCACCCCTG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCGGGTGGTGGGTTCGATaGTGGTACCACAAACCAGAC +
Preference number: 5 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSGWWVR*WYHKPD
Trigger: GTCTGGTTTGTGGTACCACAATCGAACCCACCACCC...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGCTTTGATGTGCTTCTaGTGCTCAATGGTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGALMCF*CSMVLG
Trigger: CCCCAACACCATTGAGCACAAGAAGCACATCAAAGC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCCGTGCTCATCACCTTaGGGTGCTCAGATTCCAGGT +
Preference number: 5 (lower is better)
Translates to: TAILPTERCRHIMPPGVPPCSSP*GAQIPG
Trigger: ACCTGGAATCTGAGCACCCAAAGGTGATGAGCACGG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCAGAGGATGGTGCTGTaGGTGTTGAGGGCTCAGATG +
Preference number: 5 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPQRMVL*VLRAQM
Trigger: CATCTGAGCCCTCAACACCAACAGCACCATCCTCTG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGTCAGGAATTCCTCCTaGGCTGTTTCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: TAILPTERCRHIMPPGVPVRNSS*AVSRDS
Trigger: GGAGTCCCTGGAAACAGCCAAGGAGGAATTCCTGAC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp ACAAACCAGACAATTGCTGGTAGGCCTTGTTGCAGATCCCGCAGCTaGAGGGCTTCCCTCCAACGTGGGTCACCACGTGCCGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: TNQTIAGRPCCRSRS*RASLQRGSPRAAPA
Trigger: TGCTGGAGCGGCACGTGGTGACCCACGTTGGAGGGAAGCCCTTCAGCTGCGGGATCTGCAACAAGGCCTACCAGCAATTGTCTGGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp GCCTGGGTTTCCGTGCTCATCACCTTTGGGTGCTCAGATTCCAGGTaGCTGTCAAGCTGGGCCTGGGAGGTGAAGAGTTCCCCACAGAGC +
Preference number: 5 (lower is better)
Translates to: AWVSVLITFGCSDSR*LSSWAWEVKSSPQS
Trigger: GCTCTGTGGGGAACTCTTCACCTCCCAGGCCCAGCTTGACAGTCACCTGGAATCTGAGCACCCAAAGGTGATGAGCACGGAAACCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp TGTGGGGCCTCCTCTCTGCTGCAAACGCAGGAAGGCTCTGCCGGATaGAAGGCTGCTCATTTGGCCTCACCACAGATCAGCGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: CGASSLLQTQEGSAG*KAAHLASPQISVTV
Trigger: CACAGTGACGCTGATCTGTGGTGAGGCCAAATGAGCAGCCTTTCATCCGGCAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 90 bp CCTTGCACAGAGTGTACAGCTGCTGCAGCAGCTGCCGGCTGTAGTTaGGGAGCTCCATTGCGTCAACTCTGCCCCAAGAACTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PCTECTAAAAAAGCS*GAPLRQLCPKNCSS
Trigger: GGAAGAGCAGTTCTTGGGGCAGAGTTGACGCAATGGAGCTCCCCAACTACAGCCGGCAGCTGCTGCAGCAGCTGTACACTCTGTGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CCA 90 bp TGCCATCCAGCAAGTCCTCCACAGTCACCGCCACGAGCTCAGAGCTaGCCTGAGATGCCTGAGAATCTGGCAACGTCACAAACACCTGCG +
Preference number: 5 (lower is better)
Translates to: CHPASPPQSPPRAQS*PEMPENLATSQTPA
Trigger: CGCAGGTGTTTGTGACGTTGCCAGATTCTCAGGCATCTCAGGCCAGCTCTGAGCTCGTGGCGGTGACTGTGGAGGACTTGCTGGATGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCTTGGAGAAGTTGTGCTaGCCCACAGGTAGTTTGCCC +
Preference number: 5 (lower is better)
Translates to: TAILPTERCRHIMPPGVPLEKLC*PTGSLP
Trigger: GGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAA...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCATCATCAGGGCTTGGTaGGACTGTGGTGCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: TAILPTERCRHIMPPGVPIIRAW*DCGAWQ
Trigger: TTGCCAAGCACCACAGTCCAACCAAGCCCTGATGAT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCTCCAGGGGCTAAACTaGTCATGTGTGAGATCATCT +
Preference number: 5 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGLQGLN*SCVRSS
Trigger: AGATGATCTCACACATGACAAGTTTAGCCCCTGGAG...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCCAATGGACAGGTCTTaGTCTCCTGAACCACCAGCA +
Preference number: 5 (lower is better)
Translates to: TAILPTERCRHIMPPGVPPMDRS*SPEPPA
Trigger: TGCTGGTGGTTCAGGAGACAAAGACCTGTCCATTGG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCCAATGGACAGGTCTTaGTCTCCTGAACCACCAGCA +
Preference number: 5 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSPMDRS*SPEPPA
Trigger: TGCTGGTGGTTCAGGAGACAAAGACCTGTCCATTGG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGGTGGTGGGTTCGATaGTGGTACCACAAACCAGAC +
Preference number: 5 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPGWWVR*WYHKPD
Trigger: GTCTGGTTTGTGGTACCACAATCGAACCCACCACCC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTTTGTGCTCAATGGTGTaGGGGAAGGTTTTGTCACAG +
Preference number: 5 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGLCSMV*GKVLSQ
Trigger: CTGTGACAAAACCTTCCCCAACACCATTGAGCACAA...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCCTAAGGTCCCCGAATaGTCTGTTGGTGCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMPKVPE*SVGAPL
Trigger: GAGAGGGGCACCAACAGACAATTCGGGGACCTTAGG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCACTTCCCTCCCTCCTTaGGTCAATGTGCAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: TAILPTERCRHIMPPGVPTSLPP*VNVQLP
Trigger: TGGAAGCTGCACATTGACCAAAGGAGGGAGGGAAGT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCCTCTGTGCTCCCTTTaGGCTGCACTGTGTCTACAT +
Preference number: 5 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPPLCSL*AALCLH
Trigger: ATGTAGACACAGTGCAGCCAAAAGGGAGCACAGAGG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp GGAGGTGAAGAGTTCCCCACAGAGCTCACAGGGGAAGGTGGTCTCTaGCTGCTTGAAGTGCTCCGTGGTGACATGGTGCTGCAATGCTCC +
Preference number: 5 (lower is better)
Translates to: GGEEFPTELTGEGGL*LLEVLRGDMVLQCS
Trigger: GGAGCATTGCAGCACCATGTCACCACGGAGCACTTCAAGCAGTCAGAGACCACCTTCCCCTGTGAGCTCTGTGGGGAACTCTTCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp TTGGGTGCTCAGATTCCAGGTGACTGTCAAGCTGGGCCTGGGAGGTaGAGAGTTCCCCACAGAGCTCACAGGGGAAGGTGGTCTCTGACT +
Preference number: 5 (lower is better)
Translates to: LGAQIPGDCQAGPGR*RVPHRAHRGRWSLT
Trigger: AGTCAGAGACCACCTTCCCCTGTGAGCTCTGTGGGGAACTCTTCACCTCCCAGGCCCAGCTTGACAGTCACCTGGAATCTGAGCACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp GTACAGCTGCTGCAGCAGCTGCCGGCTGTAGTTGGGGAGCTCCATTaGGTCAACTCTGCCCCAAGAACTGCTCTTCCTCTCCTCTCCTTA +
Preference number: 5 (lower is better)
Translates to: VQLLQQLPAVVGELH*VNSAPRTALPLLSL
Trigger: TAAGGAGAGGAGAGGAAGAGCAGTTCTTGGGGCAGAGTTGACGCAATGGAGCTCCCCAACTACAGCCGGCAGCTGCTGCAGCAGCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 90 bp GATGAAAGGCTGCTCATTTGGCCTCACCACAGATCAGCGTCACTGTaGCATCCAGCAAGTCCTCCACAGTCACCGCCACGAGCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: DERLLIWPHHRSASL*HPASPPQSPPRAQS
Trigger: GCTCTGAGCTCGTGGCGGTGACTGTGGAGGACTTGCTGGATGGCACAGTGACGCTGATCTGTGGTGAGGCCAAATGAGCAGCCTTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp CTCCTCTCTGCTGCAAACGCAGGAAGGCTCTGCCGGATGAAAGGCTaGTCATTTGGCCTCACCACAGATCAGCGTCACTGTGCCATCCAG +
Preference number: 5 (lower is better)
Translates to: LLSAANAGRLCRMKG*SFGLTTDQRHCAIQ
Trigger: CTGGATGGCACAGTGACGCTGATCTGTGGTGAGGCCAAATGAGCAGCCTTTCATCCGGCAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 90 bp TGCCACAGAGGTCACATGTCACTGGAAGCCTCTTCTTCTTCTTCTTaGGGGCATCGGGCTCTCCACCTGCACCATGGGCCTCCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: CHRGHMSLEASSSSS*GHRALHLHHGPPAD
Trigger: ATCAGCTGGAGGCCCATGGTGCAGGTGGAGAGCCCGATGCCCCCAAGAAGAAGAAGAAGAGGCTTCCAGTGACATGTGACCTCTGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 90 bp GGCGGTCCCCGGTGTGAAGGCGAAGGTGGTTCTTCAGGGTGGAATTaGCTGCAAACTTCGCCCCACACTCTTCACAGGAGAAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GGPRCEGEGGSSGWN*LQTSPHTLHRRKAS
Trigger: AGAAGCCTTTCTCCTGTGAAGAGTGTGGGGCGAAGTTTGCAGCCAATTCCACCCTGAAGAACCACCTTCGCCTTCACACCGGGGACCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTATGATTTTGGAGAAGTaGTGCTTGCCCACAGGTAGT +
Preference number: 5 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGMILEK*CLPTGS
Trigger: ACTACCTGTGGGCAAGCACAACTTCTCCAAAATCAT...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCGCAGAAGGCCCAGGTTaGGGAAAGTCGTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSAEGPG*GKSSSQ
Trigger: CTGTGAAGACGACTTTCCCAAACCTGGGCCTTCTGC...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGTCACGGCTGCTCCTCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTGCTGATATCAGAGAATaGAAACCACCTGAACCAGAG +
Preference number: 5 (lower is better)
Translates to: GSHGCSSTRRQDCLPGAGADIRE*KPPEPE
Trigger: CTCTGGTTCAGGTGGTTTCAATTCTCTGATATCAGC...ACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGAGGAGCAGCCGTGACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTTACACTGCACCTGTTaGCTCTTAGCCACCCGGCAG +
Preference number: 5 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTLHCTC*LLATRQ
Trigger: CTGCCGGGTGGCTAAGAGCAAACAGGTGCAGTGTAA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTCTCTTCTTCTTCTTCTaGGGGGCATCGGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTLFFFF*GASGSP
Trigger: TGGAGAGCCCGATGCCCCCAAGAAGAAGAAGAAGAG...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGGAGAGGCCATTGGCTaGCCGGAAGCCCTTGCCACA +
Preference number: 5 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEGEAIG*PEALAT
Trigger: TGTGGCAAGGGCTTCCGGCAAGCCAATGGCCTCTCC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCCGTGCTCATCACCTTaGGGTGCTCAGATTCCAGGT +
Preference number: 5 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLPCSSP*GAQIPG
Trigger: ACCTGGAATCTGAGCACCCAAAGGTGATGAGCACGG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACACCGGCTCTGGGGTTaGGATCACCTGCGCCATCTG +
Preference number: 5 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQHRLWG*DHLRHL
Trigger: CAGATGGCGCAGGTGATCCAAACCCCAGAGCCGGTG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCAGAGGATGGTGCTGTaGGTGTTGAGGGCTCAGATG +
Preference number: 5 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMQRMVL*VLRAQM
Trigger: CATCTGAGCCCTCAACACCAACAGCACCATCCTCTG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCAGAGGATGGTGCTGTaGGTGTTGAGGGCTCAGATG +
Preference number: 5 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSQRMVL*VLRAQM
Trigger: CATCTGAGCCCTCAACACCAACAGCACCATCCTCTG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTCTTCTGGTCAGTTTTaGGCTTCTGAGGCCGACTCT +
Preference number: 5 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPSSGQF*ASEADS
Trigger: AGAGTCGGCCTCAGAAGCCAAAAACTGACCAGAAGA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp AAGGTCATGAGGCAGTGCTTGCACATGAACGGGCGGTCCCCGGTGTaGAGGCGAAGGTGGTTCTTCAGGGTGGAATTGGCTGCAAACTTC +
Preference number: 5 (lower is better)
Translates to: KVMRQCLHMNGRSPV*RRRWFFRVELAANF
Trigger: GAAGTTTGCAGCCAATTCCACCCTGAAGAACCACCTTCGCCTTCACACCGGGGACCGCCCGTTCATGTGCAAGCACTGCCTCATGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp GGCTGTAGTTGGGGAGCTCCATTGCGTCAACTCTGCCCCAAGAACTaGTCTTCCTCTCCTCTCCTTAGAGTTGGCTTTGGGAGGACAGGC +
Preference number: 5 (lower is better)
Translates to: GCSWGAPLRQLCPKN*SSSPLLRVGFGRTG
Trigger: GCCTGTCCTCCCAAAGCCAACTCTAAGGAGAGGAGAGGAAGAGCAGTTCTTGGGGCAGAGTTGACGCAATGGAGCTCCCCAACTACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 90 bp GCAGCAGCTGCCGGCTGTAGTTGGGGAGCTCCATTGCGTCAACTCTaGCCCAAGAACTGCTCTTCCTCTCCTCTCCTTAGAGTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: AAAAGCSWGAPLRQL*PKNCSSSPLLRVGF
Trigger: AAAGCCAACTCTAAGGAGAGGAGAGGAAGAGCAGTTCTTGGGGCAGAGTTGACGCAATGGAGCTCCCCAACTACAGCCGGCAGCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 90 bp GTGAAGAGTTCCCCACAGAGCTCACAGGGGAAGGTGGTCTCTGACTaGTTGAAGTGCTCCGTGGTGACATGGTGCTGCAATGCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: VKSSPQSSQGKVVSD*LKCSVVTWCCNAPG
Trigger: TCCTGGAGCATTGCAGCACCATGTCACCACGGAGCACTTCAAGCAGTCAGAGACCACCTTCCCCTGTGAGCTCTGTGGGGAACTCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 90 bp TGCTGCAAACGCAGGAAGGCTCTGCCGGATGAAAGGCTGCTCATTTaGCCTCACCACAGATCAGCGTCACTGTGCCATCCAGCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: CCKRRKALPDERLLI*PHHRSASLCHPASP
Trigger: AGGACTTGCTGGATGGCACAGTGACGCTGATCTGTGGTGAGGCCAAATGAGCAGCCTTTCATCCGGCAGAGCCTTCCTGCGTTTGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCATCATCAGGGCTTGGTaGGACTGTGGTGCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSIIRAW*DCGAWQ
Trigger: TTGCCAAGCACCACAGTCCAACCAAGCCCTGATGAT...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCCTCCAGGGGCTAAACTaGTCATGTGTGAGATCATCT +
Preference number: 5 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSLQGLN*SCVRSS
Trigger: AGATGATCTCACACATGACAAGTTTAGCCCCTGGAG...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTTCTTCAGGGTGGAATaGGCTGCAAACTTCGCCCCA +
Preference number: 5 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLFFRVE*AANFAP
Trigger: TGGGGCGAAGTTTGCAGCCAATTCCACCCTGAAGAA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGGATGGAGAGGCCATaGGCTTGCCGGAAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQWMERP*ACRKPL
Trigger: CAAGGGCTTCCGGCAAGCCAATGGCCTCTCCATCCA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTGGATGGAGAGGCCATaGGCTTGCCGGAAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEWMERP*ACRKPL
Trigger: CAAGGGCTTCCGGCAAGCCAATGGCCTCTCCATCCA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCTAGGTGAGACTGTGTaGGTTGGTGCTAAGCTAAGA +
Preference number: 5 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPLGETV*VGAKLR
Trigger: TCTTAGCTTAGCACCAACCAACACAGTCTCACCTAG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGATGGTGCTGTTGGTGTaGAGGGCTCAGATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLMVLLV*RAQMLL
Trigger: CAACAGCATCTGAGCCCTCAACACCAACAGCACCAT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCAGGCAGTGGCAGCATTaGCAGCCCCCACTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGRQWQH*QPPLWA
Trigger: GGCCCACAGTGGGGGCTGCAAATGCTGCCACTGCCT...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAAATACAGGCACAGCCTaGGTAGAAACAGTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPNTGTA*VETVSP
Trigger: AGGGCTCACTGTTTCTACCAAGGCTGTGCCTGTATT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGACTTCCCTCCCTCCTTaGGTCAATGTGCAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMTSLPP*VNVQLP
Trigger: TGGAAGCTGCACATTGACCAAAGGAGGGAGGGAAGT...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp CCCGGAAGAAAGCATCGGCACCAGGCTCCCTTCGTATTTCCTCCATaGGCAGGTCCAATGGACAGGTCTTTGTCTCCTGAACCACCAGCA +
Preference number: 5 (lower is better)
Translates to: PGRKHRHQAPFVFPP*AGPMDRSLSPEPPA
Trigger: TGCTGGTGGTTCAGGAGACAAAGACCTGTCCATTGGACCTGCTCATGGAGGAAATACGAAGGGAGCCTGGTGCCGATGCTTTCTTCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS GCA 90 bp GTCCCCGGTGTGAAGGCGAAGGTGGTTCTTCAGGGTGGAATTGGCTaGAAACTTCGCCCCACACTCTTCACAGGAGAAAGGCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: VPGVKAKVVLQGGIG*KLRPTLFTGERLLI
Trigger: GATGAGAAGCCTTTCTCCTGTGAAGAGTGTGGGGCGAAGTTTGCAGCCAATTCCACCCTGAAGAACCACCTTCGCCTTCACACCGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 90 bp TGCACAGGAGGTGGCATATTTCAATGGCCGGGACTGATTTTTCCATaGCTCTGCTCAGCACTGCTCTCAGGGAAGCTTCAGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: CTGGGIFQWPGLIFP*LCSALLSGKLQGWL
Trigger: CAGCCAGCCCTGAAGCTTCCCTGAGAGCAGTGCTGAGCAGAGCCATGGAAAAATCAGTCCCGGCCATTGAAATATGCCACCTCCTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS-3UTR CAA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGTTGCCCACAGGTAGTTaGCCCGTGTACATCATTTCC +
Preference number: 5 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLLPTGS*PVYIIS
Trigger: GGAAATGATGTACACGGGCAAACTACCTGTGGGCAA...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGTTGGACTGTGGTGCTaGGCAAAGTGGCTGATTTCT +
Preference number: 5 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMVGLWC*AKWLIS
Trigger: AGAAATCAGCCACTTTGCCAAGCACCACAGTCCAAC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCGTACTCAATCTTCTGTaGGATGGCCTCCAAGATCAA +
Preference number: 5 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPVLNLL*DGLQDQ
Trigger: TTGATCTTGGAGGCCATCCAACAGAAGATTGAGTAC...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACAGGGGTGGTACTCTTaGGAGTGCACCTCATGGATG +
Preference number: 5 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSQGWYS*ECTSWM
Trigger: CATCCATGAGGTGCACTCCAAAGAGTACCACCCCTG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGCCACAAACCAGACAATaGCTGGTAGGCCTTGTTGCA +
Preference number: 5 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMPQTRQ*LVGLVA
Trigger: TGCAACAAGGCCTACCAGCAATTGTCTGGTTTGTGG...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGCTTTGATGTGCTTCTaGTGCTCAATGGTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLALMCF*CSMVLG
Trigger: CCCCAACACCATTGAGCACAAGAAGCACATCAAAGC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCTCTGCATGTTCTGCTTaGATGTGCTTCTTGTGCTCA +
Preference number: 5 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPSACSA*MCFLCS
Trigger: TGAGCACAAGAAGCACATCAAAGCAGAACATGCAGA...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCACCGGCTCTGGGGTTaGGATCACCTGCGCCATCTG +
Preference number: 5 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGHRLWG*DHLRHL
Trigger: CAGATGGCGCAGGTGATCCAAACCCCAGAGCCGGTG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCTCTTCTGGTCAGTTTTaGGCTTCTGAGGCCGACTCT +
Preference number: 5 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSSSGQF*ASEADS
Trigger: AGAGTCGGCCTCAGAAGCCAAAAACTGACCAGAAGA...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCATATTCAGTGCCATTTaGCCACCTGCAGATCAAGAG +
Preference number: 5 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSIFSAI*PPADQE
Trigger: CTCTTGATCTGCAGGTGGCAAAATGGCACTGAATAT...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTTAATAACATGCTGCTaGTCTCCCTGGAACCGCCTG +
Preference number: 5 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMLITCC*SPWNRL
Trigger: CAGGCGGTTCCAGGGAGACAAGCAGCATGTTATTAA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp AGCCAGTGCGGAGCCCACTCAGAGCAGACAGTAAACTCGGGAAGGGCCTTCCCCCCCTTCAGCCCCAAATaGTTCTCTTACTCCCATTTT +
Preference number: 5 (lower is better)
Translates to: SQCGAHSEQTVNSGRAFPPFSPK*FSYSHF
Trigger: AAAATGGGAGTAAGAGAACAATTTGGGGCTGAAGGG...GGGGAAGGCCCTTCCCGAGTTTACTGTCTGCTCTGAGTGGGCTCCGCACTGGCT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCATTTTATAATAAAGTaGGGAGCCAGGAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: TAILPTERCRHIMPPGVPHFIIK*GARRRE
Trigger: CTCCCTCCTCCTGGCTCCCAACTTTATTATAAAATG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGACTGATCCAATCTCCTaGTGTTTAGGGCAGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLTDPIS*CLGQGS
Trigger: TGACCCCTGCCCTAAACACAAGGAGATTGGATCAGT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404138.5
CDS TCA 90 bp GAGGACAGGCCCTGTTCAGCACCGATTCAAACTGCCGTTCTTTATTaGCAGCGCCATAGAGGACACGAACACTCCTGCCCGAAGGGAACA +
Preference number: 5 (lower is better)
Translates to: EDRPCSAPIQTAVLY*QRHRGHEHSCPKGT
Trigger: TGTTCCCTTCGGGCAGGAGTGTTCGTGTCCTCTATGGCGCTGTCAATAAAGAACGGCAGTTTGAATCGGTGCTGAACAGGGCCTGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374651.8
ENST00000375647.5
CDS CCA 90 bp TCCTGGGCTGTGGGAGAATTCACACTCATCTCTTGTGAAACTGAATaGGCTGCTTCCTCAGTCTCAGCTTTCACAGGGCCCCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: SWAVGEFTLISCETE*AASSVSAFTGPPGV
Trigger: CACTCCAGGGGGCCCTGTGAAAGCTGAGACTGAGGAAGCAGCCCATTCAGTTTCACAAGAGATGAGTGTGAATTCTCCCACAGCCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CCA 90 bp TTGTCCCCGGTGTGGGTCCTCACGTGGCGGGACAGCTCAATAGACTaGGCAAACACAGCATCACAGTACTGGCATGCATACATTTTCCCT +
Preference number: 5 (lower is better)
Translates to: LSPVWVLTWRDSSID*ANTASQYWHAYIFP
Trigger: AGGGAAAATGTATGCATGCCAGTACTGTGATGCTGTGTTTGCCCAGTCTATTGAGCTGTCCCGCCACGTGAGGACCCACACCGGGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGGCTAAGGAGATGATTTaGGAGAAGTTGTGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLAKEMI*EKLCLP
Trigger: GGGCAAGCACAACTTCTCCAAAATCATCTCCTTAGC...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCCTGGTCAGAAGATTTTaGCAGCTAACAGCTACATCA +
Preference number: 5 (lower is better)
Translates to: TAILPTERCRHIMPPGVPLVRRF*QLTATS
Trigger: TGATGTAGCTGTTAGCTGCAAAAATCTTCTGACCAG...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTTTTTCTATTGTCTCCTaGGGTGTTCTGCCCTCACAG +
Preference number: 5 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTFSIVS*GVLPSQ
Trigger: CTGTGAGGGCAGAACACCCAAGGAGACAATAGAAAA...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCGCAACAAATTTTCTATaGTCTCCTTGGGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: TAILPTERCRHIMPPGVPATNFL*SPWVFC
Trigger: GCAGAACACCCAAGGAGACAATAGAAAATTTGTTGC...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGCTCCAGGGGCTAAACTaGTCATGTGTGAGATCATCT +
Preference number: 5 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLLQGLN*SCVRSS
Trigger: AGATGATCTCACACATGACAAGTTTAGCCCCTGGAG...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGCTGATATCAGAGAATaGAAACCACCTGAACCAGAG +
Preference number: 5 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPADIRE*KPPEPE
Trigger: CTCTGGTTCAGGTGGTTTCAATTCTCTGATATCAGC...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACCAATGGACAGGTCTTaGTCTCCTGAACCACCAGCA +
Preference number: 5 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSPMDRS*SPEPPA
Trigger: TGCTGGTGGTTCAGGAGACAAAGACCTGTCCATTGG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCTCTTCTTCTTCTTCTaGGGGGCATCGGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAELFFFF*GASGSP
Trigger: TGGAGAGCCCGATGCCCCCAAGAAGAAGAAGAAGAG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCATTCTTCAGGGTGGAATaGGCTGCAAACTTCGCCCCA +
Preference number: 5 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSFFRVE*AANFAP
Trigger: TGGGGCGAAGTTTGCAGCCAATTCCACCCTGAAGAA...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGTCATGAGGCAGTGCTaGCACATGAACGGGCGGTCC +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSVMRQC*HMNGRS
Trigger: GGACCGCCCGTTCATGTGCAAGCACTGCCTCATGAC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGCTTGCCGGAAGCCCTaGCCACAGTCTCTGCAGACA +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSACRKP*PQSLQT
Trigger: TGTCTGCAGAGACTGTGGCAAGGGCTTCCGGCAAGC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTGGATGGAGAGGCCATaGGCTTGCCGGAAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSWMERP*ACRKPL
Trigger: CAAGGGCTTCCGGCAAGCCAATGGCCTCTCCATCCA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGGGTGGTGGGTTCGATaGTGGTACCACAAACCAGAC +
Preference number: 5 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQGWWVR*WYHKPD
Trigger: GTCTGGTTTGTGGTACCACAATCGAACCCACCACCC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCATCTGCATGTTCTGCTTaGATGTGCTTCTTGTGCTCA +
Preference number: 5 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPSACSA*MCFLCS
Trigger: TGAGCACAAGAAGCACATCAAAGCAGAACATGCAGA...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGTGGTCTCTGACTGCTaGAAGTGCTCCGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQVVSDC*KCSVVT
Trigger: TGTCACCACGGAGCACTTCAAGCAGTCAGAGACCAC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCCGTGCTCATCACCTTaGGGTGCTCAGATTCCAGGT +
Preference number: 5 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEPCSSP*GAQIPG
Trigger: ACCTGGAATCTGAGCACCCAAAGGTGATGAGCACGG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGATGGTGCTGTTGGTGTaGAGGGCTCAGATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILMVLLV*RAQMLL
Trigger: CAACAGCATCTGAGCCCTCAACACCAACAGCACCAT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAAGAAACTCCAGAGCTTaGTTTTGGGAAGAGCTGACA +
Preference number: 5 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPRNSRA*FWEELT
Trigger: TGTCAGCTCTTCCCAAAACAAAGCTCTGGAGTTTCT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTCTCATCCACTGGACTaGGCACCAATGCCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILSHPLD*APMPCK
Trigger: CTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp ACTGCCATTCTGCCCACTGAGCGCTGTCGGCACATCATGCCTCCTGGGGTACCCAGAATTTCTCAGTGCTaGAAAGGATCTGACACTGGA +
Preference number: 5 (lower is better)
Translates to: TAILPTERCRHIMPPGVPRISQC*KGSDTG
Trigger: TCCAGTGTCAGATCCTTTCAAGCACTGAGAAATTCT...GGGTACCCCAGGAGGCATGATGTGCCGACAGCGCTCAGTGGGCAGAATGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCAGAATTTCTCAGTGCTaGAAAGGATCTGACACTGGA +
Preference number: 5 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSRISQC*KGSDTG
Trigger: TCCAGTGTCAGATCCTTTCAAGCACTGAGAAATTCT...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGTGCTGAACTCACCCTaGGGGAGGACTCATTATAGC +
Preference number: 5 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILVLNSP*GRTHYS
Trigger: GCTATAATGAGTCCTCCCCAAGGGTGAGTTCAGCAC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGTGCTGAACTCACCCTaGGGGAGGACTCATTATAGC +
Preference number: 5 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSVLNSP*GRTHYS
Trigger: GCTATAATGAGTCCTCCCCAAGGGTGAGTTCAGCAC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCACCTCTGTGCTCCCTTTaGGCTGCACTGTGTCTACAT +
Preference number: 5 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSPLCSL*AALCLH
Trigger: ATGTAGACACAGTGCAGCCAAAAGGGAGCACAGAGG...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp CGTATTTCCTCCATGAGCAGGTCCAATGGACAGGTCTTTGTCTCCTaGACCACCAGCAGCAGTTGCCAAATGGCTGTGGCAGAGAGAGTC +
Preference number: 5 (lower is better)
Translates to: RISSMSRSNGQVFVS*TTSSSCQMAVAERV
Trigger: GACTCTCTCTGCCACAGCCATTTGGCAACTGCTGCTGGTGGTTCAGGAGACAAAGACCTGTCCATTGGACCTGCTCATGGAGGAAATACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS TCA 90 bp CAGGAGCTGCACTGGAGTGATGAGAACTTGGAAGATCGGTGGTTCTaGGCAGCAAATACGTCAGGGTGGTGGGTTCGATTGTGGTACCAC +
Preference number: 5 (lower is better)
Translates to: QELHWSDENLEDRWF*AANTSGWWVRLWYH
Trigger: GTGGTACCACAATCGAACCCACCACCCTGACGTATTTGCTGCTCAGAACCACCGATCTTCCAAGTTCTCATCACTCCAGTGCAGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp AAATGGTACCAATGGAGATGGTGCAATCACAGAACTGCTGCTCCTTaGACAGAGTGTACAGCTGCTGCAGCAGCTGCCGGCTGTAGTTGG +
Preference number: 5 (lower is better)
Translates to: KWYQWRWCNHRTAAP*TECTAAAAAAGCSW
Trigger: CCAACTACAGCCGGCAGCTGCTGCAGCAGCTGTACACTCTGTGCAAGGAGCAGCAGTTCTGTGATTGCACCATCTCCATTGGTACCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 90 bp GGGAAGGTGGTCTCTGACTGCTTGAAGTGCTCCGTGGTGACATGGTaGTGCAATGCTCCAGGAAAACGGAAAGTAGCAGCACAGTACAAG +
Preference number: 5 (lower is better)
Translates to: GKVVSDCLKCSVVTW*CNAPGKRKVAAQYK
Trigger: CTTGTACTGTGCTGCTACTTTCCGTTTTCCTGGAGCATTGCAGCACCATGTCACCACGGAGCACTTCAAGCAGTCAGAGACCACCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 90 bp GCTTCAGCTGTAGTAGGAGTCTCCGCTGGGGTTTCTGCATTCCTCTaGCTCTCCTGGGCTGTGGGAGAATTCACACTCATCTCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: ASAVVGVSAGVSAFL*LSWAVGEFTLISCE
Trigger: TTCACAAGAGATGAGTGTGAATTCTCCCACAGCCCAGGAGAGCCAGAGGAATGCAGAAACCCCAGCGGAGACTCCTACTACAGCTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CCA 90 bp ATCGGCACCAGGCTCCCTTCGTATTTCCTCCATGAGCAGGTCCAATaGACAGGTCTTTGTCTCCTGAACCACCAGCAGCAGTTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: IGTRLPSYFLHEQVQ*TGLCLLNHQQQLPN
Trigger: ATTTGGCAACTGCTGCTGGTGGTTCAGGAGACAAAGACCTGTCCATTGGACCTGCTCATGGAGGAAATACGAAGGGAGCCTGGTGCCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 90 bp TTTCCATGGCTCTGCTCAGCACTGCTCTCAGGGAAGCTTCAGGGCTaGCTGTCTCAGAGGGAATGCTCAGAATCTCTTTCACAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: FPWLCSALLSGKLQG*LSQRECSESLSQSL
Trigger: CAGAGACTGTGAAAGAGATTCTGAGCATTCCCTCTGAGACAGCCAGCCCTGAAGCTTCCCTGAGAGCAGTGCTGAGCAGAGCCATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 90 bp TGGGGAAGGTTTTGTCACAGGAGCTGCACTGGAGTGATGAGAACTTaGAAGATCGGTGGTTCTGAGCAGCAAATACGTCAGGGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: WGRFCHRSCTGVMRT*KIGGSEQQIRQGGG
Trigger: CCCACCACCCTGACGTATTTGCTGCTCAGAACCACCGATCTTCCAAGTTCTCATCACTCCAGTGCAGCTCCTGTGACAAAACCTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTTGGAGAAGTTGTGCTaGCCCACAGGTAGTTTGCCC +
Preference number: 5 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAELEKLC*PTGSLP
Trigger: GGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTGCCTCACTAAAGGTTaGCACAGCAGGGGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSCLTKG*HSRGGG
Trigger: TCCCCCTCCCCTGCTGTGCAAACCTTTAGTGAGGCA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGGTTGGACTGTGGTGCTaGGCAAAGTGGCTGATTTCT +
Preference number: 5 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILVGLWC*AKWLIS
Trigger: AGAAATCAGCCACTTTGCCAAGCACCACAGTCCAAC...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCAAGCCCCATCCCACAGCTTGTGAGGGGCTGGATTCTCATCCACTGGACTGCTGATATCAGAGAATaGAAACCACCTGAACCAGAG +
Preference number: 5 (lower is better)
Translates to: LPSPIPQLVRGWILIHWTADIRE*KPPEPE
Trigger: CTCTGGTTCAGGTGGTTTCAATTCTCTGATATCAGC...AGTCCAGTGGATGAGAATCCAGCCCCTCACAAGCTGTGGGATGGGGCTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATTCTTCAGGGTGGAATaGGCTGCAAACTTCGCCCCA +
Preference number: 5 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQFFRVE*AANFAP
Trigger: TGGGGCGAAGTTTGCAGCCAATTCCACCCTGAAGAA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGCTTTGATGTGCTTCTaGTGCTCAATGGTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSALMCF*CSMVLG
Trigger: CCCCAACACCATTGAGCACAAGAAGCACATCAAAGC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGTCTCATCCACTGGACTaGGCACCAATGCCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAESHPLD*APMPCK
Trigger: CTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGA...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAGGCACTCCAAGAAAACAAATGTCTaGTCACAATCTGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: WKEGVAPSLPVWDPTRHSKKTNV*SQSGSP
Trigger: TGGAGACCCAGATTGTGACAAGACATTTGTTTTCTT...GGAGTGCCTGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTTAATAACATGCTGCTaGTCTCCCTGGAACCGCCTG +
Preference number: 5 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILLITCC*SPWNRL
Trigger: CAGGCGGTTCCAGGGAGACAAGCAGCATGTTATTAA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAGTGCTGAACTCACCCTaGGGGAGGACTCATTATAGC +
Preference number: 5 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQVLNSP*GRTHYS
Trigger: GCTATAATGAGTCCTCCCCAAGGGTGAGTTCAGCAC...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp AAGGTGGTCTCTGACTGCTTGAAGTGCTCCGTGGTGACATGGTGCTaGAATGCTCCAGGAAAACGGAAAGTAGCAGCACAGTACAAGCAC +
Preference number: 5 (lower is better)
Translates to: KVVSDCLKCSVVTWC*NAPGKRKVAAQYKH
Trigger: GTGCTTGTACTGTGCTGCTACTTTCCGTTTTCCTGGAGCATTGCAGCACCATGTCACCACGGAGCACTTCAAGCAGTCAGAGACCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 90 bp TGGCCTCCAAGATCAACTGGTTATGCCTCAGGATTGTTTCTAAAGTaGCATGTTCTGGGGTGGTCACTGCCCGGAAGAAAGCATCGGCAC +
Preference number: 5 (lower is better)
Translates to: WPPRSTGYASGLFLK*HVLGWSLPGRKHRH
Trigger: GTGCCGATGCTTTCTTCCGGGCAGTGACCACCCCAGAACATGCCACTTTAGAAACAATCCTGAGGCATAACCAGTTGATCTTGGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 90 bp TGCAGTCATAAGGATCTTCTATGTTGTGAAAGGTGTGCAGATGGATaGAGAGGCCATTGGCTTGCCGGAAGCCCTTGCCACAGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: CSHKDLLCCERCADG*RGHWLAGSPCHSLC
Trigger: GCAGAGACTGTGGCAAGGGCTTCCGGCAAGCCAATGGCCTCTCCATCCATCTGCACACCTTTCACAACATAGAAGATCCTTATGACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCCTCTGGTTCCAGGTTCTGCTCATGCGCGTGGACAGTAGGAGTCTCACCTTCCCTGGTCAGAAGATTTTaGCAGCTAACAGCTACATCA +
Preference number: 5 (lower is better)
Translates to: PSGSRFCSCAWTVGVSPSLVRRF*QLTATS
Trigger: TGATGTAGCTGTTAGCTGCAAAAATCTTCTGACCAG...GGAAGGTGAGACTCCTACTGTCCACGCGCATGAGCAGAACCTGGAACCAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGGCAACAAATTTTCTATaGTCTCCTTGGGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMATNFL*SPWVFC
Trigger: GCAGAACACCCAAGGAGACAATAGAAAATTTGTTGC...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGCAGAAGGCCCAGGTTaGGGAAAGTCGTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSAEGPG*GKSSSQ
Trigger: CTGTGAAGACGACTTTCCCAAACCTGGGCCTTCTGC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTTGTGCTCAATGGTGTaGGGGAAGGTTTTGTCACAG +
Preference number: 5 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILLCSMV*GKVLSQ
Trigger: CTGTGACAAAACCTTCCCCAACACCATTGAGCACAA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGTGGTCTCTGACTGCTaGAAGTGCTCCGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGVVSDC*KCSVVT
Trigger: TGTCACCACGGAGCACTTCAAGCAGTCAGAGACCAC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGCTAGGTGAGACTGTGTaGGTTGGTGCTAAGCTAAGA +
Preference number: 5 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILLGETV*VGAKLR
Trigger: TCTTAGCTTAGCACCAACCAACACAGTCTCACCTAG...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATCTTCTGGTCAGTTTTaGGCTTCTGAGGCCGACTCT +
Preference number: 5 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQSSGQF*ASEADS
Trigger: AGAGTCGGCCTCAGAAGCCAAAAACTGACCAGAAGA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GATGTGCCTGGAAGGAAGGGGTGGCCCCATCTCTGCCAGTGTGGGATCCAACCAAAGAAAACAAATGTCTaGTCACAATCTGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: DVPGRKGWPHLCQCGIQPKKTNV*SQSGSP
Trigger: TGGAGACCCAGATTGTGACAAGACATTTGTTTTCTT...TGGTTGGATCCCACACTGGCAGAGATGGGGCCACCCCTTCCTTCCAGGCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTGTCAGGAATTCCTCCTaGGCTGTTTCCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSVRNSS*AVSRDS
Trigger: GGAGTCCCTGGAAACAGCCAAGGAGGAATTCCTGAC...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAGGGGTCAGTAAACTTTaGCTGTTCAGCACCGATTCA +
Preference number: 5 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSGVSKL*LFSTDS
Trigger: TGAATCGGTGCTGAACAGCAAAAGTTTACTGACCCC...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404138.5
CDS GCA 90 bp AACTTCGCCCCACACTCTTCACAGGAGAAAGGCTTCTCATCGAAGTaGTCTGTCAGCTTATGGTACTGCATGCCTGAGGCATGGGCAAAT +
Preference number: 5 (lower is better)
Translates to: NFAPHSSQEKGFSSK*SVSLWYCMPEAWAN
Trigger: ATTTGCCCATGCCTCAGGCATGCAGTACCATAAGCTGACAGAGCACTTCGATGAGAAGCCTTTCTCCTGTGAAGAGTGTGGGGCGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 90 bp TTCTCTAGCAGAAGGCCCAGGTTTGGGAAAGTCGTCTTCACAGCCTaGAGGAGTTTTACCAAACCCTCAGCAGTCAGCGTCTTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: FSSRRPRFGKVVFTA*RSFTKPSAVSVFSS
Trigger: TGAAGAGAAGACGCTGACTGCTGAGGGTTTGGTAAAACTCCTCCAGGCTGTGAAGACGACTTTCCCAAACCTGGGCCTTCTGCTAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTTGGAGAAGTTGTGCTaGCCCACAGGTAGTTTGCCC +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSLEKLC*PTGSLP
Trigger: GGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGCTAAGGAGATGATTTaGGAGAAGTTGTGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEAKEMI*EKLCLP
Trigger: GGGCAAGCACAACTTCTCCAAAATCATCTCCTTAGC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAAGAAACTCCAGAGCTTaGTTTTGGGAAGAGCTGACA +
Preference number: 5 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSRNSRA*FWEELT
Trigger: TGTCAGCTCTTCCCAAAACAAAGCTCTGGAGTTTCT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAAAGGCCCCAGAGTTCAATATTCAGTGCCATTTaGCCACCTGCAGATCAAGAG +
Preference number: 5 (lower is better)
Translates to: CSKKPTDSFTPPQRPQSSIFSAI*PPADQE
Trigger: CTCTTGATCTGCAGGTGGCAAAATGGCACTGAATAT...TGAACTCTGGGGCCTTTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTCTCATCCACTGGACTaGGCACCAATGCCCTGTAAG +
Preference number: 5 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGSHPLD*APMPCK
Trigger: CTTACAGGGCATTGGTGCCAAGTCCAGTGGATGAGA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGTGTGGTCCCAGCTACTaGGGAAGCTGTGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQCGPSY*GSCGRR
Trigger: CCTCCTGCCACAGCTTCCCAAGTAGCTGGGACCACA...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GGCAGACAGCCCTGCCTGGTGTGTAAACACCGCACCAGCAGACTCCAACCTTTGACACATTCCCCCAATTaGGAAGCAATCTTAATTAGC +
Preference number: 5 (lower is better)
Translates to: GRQPCLVCKHRTSRLQPLTHSPN*EAILIS
Trigger: GCTAATTAAGATTGCTTCCAAATTGGGGGAATGTGT...CAAAGGTTGGAGTCTGCTGGTGCGGTGTTTACACACCAGGCAGGGCTGTCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGTGCAGGATTAGAATATaGGTACAGCCTCAACAGGGA +
Preference number: 5 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILCRIRI*VQPQQG
Trigger: TCCCTGTTGAGGCTGTACCAATATTCTAATCCTGCA...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TCCACACGCAGACAGGACTGCCTGCCTGGTGCTGGTCACAGTCTGCACCATATGTGTATCAGGTCCTCTTaGTGTTCTAGTAACAGAACA +
Preference number: 5 (lower is better)
Translates to: STRRQDCLPGAGHSLHHMCIRSS*CSSNRT
Trigger: TGTTCTGTTACTAGAACACAAAGAGGACCTGATACA...CATATGGTGCAGACTGTGACCAGCACCAGGCAGGCAGTCCTGTCTGCGTGTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp AAGGATTTCTACTTGAGGCTTCTCTGGTTCCTTTCTGAATGTCTCTaGGGATGGCGCAGAGACATCCCTTACCACCTGACCCTGAACCGA +
Preference number: 5 (lower is better)
Translates to: KDFYLRLLWFLSECL*GWRRDIPYHLTLNR
Trigger: TCGGTTCAGGGTCAGGTGGTAAGGGATGTCTCTGCGCCATCCTCAGAGACATTCAGAAAGGAACCAGAGAAGCCTCAAGTAGAAATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGATGATTTTGGAGAAGTaGTGCTTGCCCACAGGTAGT +
Preference number: 5 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEMILEK*CLPTGS
Trigger: ACTACCTGTGGGCAAGCACAACTTCTCCAAAATCAT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGGTACTCAATCTTCTGTaGGATGGCCTCCAAGATCAA +
Preference number: 5 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEVLNLL*DGLQDQ
Trigger: TTGATCTTGGAGGCCATCCAACAGAAGATTGAGTAC...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCCACAAACCAGACAATaGCTGGTAGGCCTTGTTGCA +
Preference number: 5 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGPQTRQ*LVGLVA
Trigger: TGCAACAAGGCCTACCAGCAATTGTCTGGTTTGTGG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTAATACAGGCACAGCCTaGGTAGAAACAGTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSNTGTA*VETVSP
Trigger: AGGGCTCACTGTTTCTACCAAGGCTGTGCCTGTATT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAACCCTTCAGCCCCAAATaGTTCTCTTACTCCCATTTT +
Preference number: 5 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQPFSPK*FSYSHF
Trigger: AAAATGGGAGTAAGAGAACAATTTGGGGCTGAAGGG...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGCATTTTATAATAAAGTaGGGAGCCAGGAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAEHFIIK*GARRRE
Trigger: CTCCCTCCTCCTGGCTCCCAACTTTATTATAAAATG...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCAGGGACACAACAGTTaGAACATCCAGGCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGQGHNS*NIQAFL
Trigger: GAGGAAAGCCTGGATGTTCAAACTGTTGTGTCCCTG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp GGCAGCAAGCTCTGGGGAAGAATGAGGCTCTCCAGCACCTTCAGATaGAAGGATTTCTACTTGAGGCTTCTCTGGTTCCTTTCTGAATGT +
Preference number: 5 (lower is better)
Translates to: GSKLWGRMRLSSTFR*KDFYLRLLWFLSEC
Trigger: ACATTCAGAAAGGAACCAGAGAAGCCTCAAGTAGAAATCCTTTCATCTGAAGGTGCTGGAGAGCCTCATTCTTCCCCAGAGCTTGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS TCA 90 bp GTAAACTTTTGCTGTTCAGCACCGATTCAAACTGCCGTTCTTTATTaGCAGCGCCATAGAGGACACGAACACTCCTGCCCGAAGGGAACA +
Preference number: 5 (lower is better)
Translates to: VNFCCSAPIQTAVLY*QRHRGHEHSCPKGT
Trigger: TGTTCCCTTCGGGCAGGAGTGTTCGTGTCCTCTATGGCGCTGTCAATAAAGAACGGCAGTTTGAATCGGTGCTGAACAGCAAAAGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400239.6
ENST00000404138.5
CDS GCA 90 bp CATCATTTCCAACAAGAGCGCAAACTCCTCGGGGCTCACCACAGATaGATCGATGGAGATGGTATCTGTGTTATCCAGCAGGGTTTTGAA +
Preference number: 5 (lower is better)
Translates to: HHFQQERKLLGAHHR*IDGDGICVIQQGFE
Trigger: TTCAAAACCCTGCTGGATAACACAGATACCATCTCCATCGATGCATCTGTGGTGAGCCCCGAGGAGTTTGCGCTCTTGTTGGAAATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CCA 90 bp ATGGACAGGTCTTTGTCTCCTGAACCACCAGCAGCAGTTGCCAAATaGCTGTGGCAGAGAGAGTCTGCTTTTCTAGAACTGCTGATATCA +
Preference number: 5 (lower is better)
Translates to: MDRSLSPEPPAAVAK*LWQRESAFLELLIS
Trigger: TGATATCAGCAGTTCTAGAAAAGCAGACTCTCTCTGCCACAGCCATTTGGCAACTGCTGCTGGTGGTTCAGGAGACAAAGACCTGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 90 bp CTTTGGAGTGCACCTCATGGATGTGCTTCCGGTGATCCTGAAGAGTaGGGAAACTCATCCTGCACTTCTTGCAGTCATAAGGATCTTCTA +
Preference number: 5 (lower is better)
Translates to: LWSAPHGCASGDPEE*GNSSCTSCSHKDLL
Trigger: TAGAAGATCCTTATGACTGCAAGAAGTGCAGGATGAGTTTCCCCACTCTTCAGGATCACCGGAAGCACATCCATGAGGTGCACTCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTTTTCTATTGTCTCCTaGGGTGTTCTGCCCTCACAG +
Preference number: 5 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGFSIVS*GVLPSQ
Trigger: CTGTGAGGGCAGAACACCCAAGGAGACAATAGAAAA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTTTTCTATTGTCTCCTaGGGTGTTCTGCCCTCACAG +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSFSIVS*GVLPSQ
Trigger: CTGTGAGGGCAGAACACCCAAGGAGACAATAGAAAA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTTTGTGCTCAATGGTGTaGGGGAAGGTTTTGTCACAG +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSLCSMV*GKVLSQ
Trigger: CTGTGACAAAACCTTCCCCAACACCATTGAGCACAA...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCCTTCCCCTCTTTCTTGATGAGAACCAGCACTGGGTTTGTGCCTTCTGCTGAGAGAATTTCTCAGTGCTaGAAAGGATCTGACACTGGA +
Preference number: 5 (lower is better)
Translates to: AFPSFLMRTSTGFVPSAERISQC*KGSDTG
Trigger: TCCAGTGTCAGATCCTTTCAAGCACTGAGAAATTCT...CTCAGCAGAAGGCACAAACCCAGTGCTGGTTCTCATCAAGAAAGAGGGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGAAGAAAACAAATGTCTaGTCACAATCTGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILKKTNV*SQSGSP
Trigger: TGGAGACCCAGATTGTGACAAGACATTTGTTTTCTT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp GCAGCATTTGCAGCCCCCACTGTGGGCCAAGTCCCATATCTAACTGCCATTCTGACACATTCCCCCAATTaGGAAGCAATCTTAATTAGC +
Preference number: 5 (lower is better)
Translates to: AAFAAPTVGQVPYLTAILTHSPN*EAILIS
Trigger: GCTAATTAAGATTGCTTCCAAATTGGGGGAATGTGT...CAGAATGGCAGTTAGATATGGGACTTGGCCCACAGTGGGGGCTGCAAATGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp CTTCAGATGAAAGGATTTCTACTTGAGGCTTCTCTGGTTCCTTTCTaGATGTCTCTGAGGATGGCGCAGAGACATCCCTTACCACCTGAC +
Preference number: 5 (lower is better)
Translates to: LQMKGFLLEASLVPF*MSLRMAQRHPLPPD
Trigger: GTCAGGTGGTAAGGGATGTCTCTGCGCCATCCTCAGAGACATTCAGAAAGGAACCAGAGAAGCCTCAAGTAGAAATCCTTTCATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 90 bp GCTTCCGGTGATCCTGAAGAGTGGGGAAACTCATCCTGCACTTCTTaGAGTCATAAGGATCTTCTATGTTGTGAAAGGTGTGCAGATGGA +
Preference number: 5 (lower is better)
Translates to: ASGDPEEWGNSSCTS*SHKDLLCCERCADG
Trigger: TCCATCTGCACACCTTTCACAACATAGAAGATCCTTATGACTGCAAGAAGTGCAGGATGAGTTTCCCCACTCTTCAGGATCACCGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 90 bp AGGTCTTTGTCTCCTGAACCACCAGCAGCAGTTGCCAAATGGCTGTaGCAGAGAGAGTCTGCTTTTCTAGAACTGCTGATATCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: RSLSPEPPAAVAKWL*QRESAFLELLISEN
Trigger: ATTCTCTGATATCAGCAGTTCTAGAAAAGCAGACTCTCTCTGCCACAGCCATTTGGCAACTGCTGCTGGTGGTTCAGGAGACAAAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 90 bp AGGTGCTCCTCCTCCGAGGTAAAGAGCTTGTACTCAATCTTCTGTTaGATGGCCTCCAAGATCAACTGGTTATGCCTCAGGATTGTTTCT +
Preference number: 5 (lower is better)
Translates to: RCSSSEVKSLYSIFC*MASKINWLCLRIVS
Trigger: AGAAACAATCCTGAGGCATAACCAGTTGATCTTGGAGGCCATCCAACAGAAGATTGAGTACAAGCTCTTTACCTCGGAGGAGGAGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTATGATTTTGGAGAAGTaGTGCTTGCCCACAGGTAGT +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSMILEK*CLPTGS
Trigger: ACTACCTGTGGGCAAGCACAACTTCTCCAAAATCAT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGTACTCAATCTTCTGTaGGATGGCCTCCAAGATCAA +
Preference number: 5 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGVLNLL*DGLQDQ
Trigger: TTGATCTTGGAGGCCATCCAACAGAAGATTGAGTAC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACACCGGCTCTGGGGTTaGGATCACCTGCGCCATCTG +
Preference number: 5 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRHRLWG*DHLRHL
Trigger: CAGATGGCGCAGGTGATCCAAACCCCAGAGCCGGTG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTATATTCAGTGCCATTTaGCCACCTGCAGATCAAGAG +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSIFSAI*PPADQE
Trigger: CTCTTGATCTGCAGGTGGCAAAATGGCACTGAATAT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCCATTTTATAATAAAGTaGGGAGCCAGGAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGHFIIK*GARRRE
Trigger: CTCCCTCCTCCTGGCTCCCAACTTTATTATAAAATG...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCTGCAGGATTAGAATATaGGTACAGCCTCAACAGGGA +
Preference number: 5 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGCRIRI*VQPQQG
Trigger: TCCCTGTTGAGGCTGTACCAATATTCTAATCCTGCA...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CCGAACAGATCCATGTGTTCCAAGAAGCCCACAGACTCCTTCACACCACCCCAATGTATCAGGTCCTCTTaGTGTTCTAGTAACAGAACA +
Preference number: 5 (lower is better)
Translates to: PNRSMCSKKPTDSFTPPQCIRSS*CSSNRT
Trigger: TGTTCTGTTACTAGAACACAAAGAGGACCTGATACA...TTGGGGTGGTGTGAAGGAGTCTGTGGGCTTCTTGGAACACATGGATCTGTTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp CATGGATGTGCTTCCGGTGATCCTGAAGAGTGGGGAAACTCATCCTaGACTTCTTGCAGTCATAAGGATCTTCTATGTTGTGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: HGCASGDPEEWGNSS*TSCSHKDLLCCERC
Trigger: ACACCTTTCACAACATAGAAGATCCTTATGACTGCAAGAAGTGCAGGATGAGTTTCCCCACTCTTCAGGATCACCGGAAGCACATCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp TCATGGAACTTCATATCTGCATGTTCTGCTTTGATGTGCTTCTTGTaGTCAATGGTGTTGGGGAAGGTTTTGTCACAGGAGCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: SWNFISACSALMCFL*SMVLGKVLSQELHW
Trigger: CCAGTGCAGCTCCTGTGACAAAACCTTCCCCAACACCATTGAGCACAAGAAGCACATCAAAGCAGAACATGCAGATATGAAGTTCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp CTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGGCGCAACAAATTTTCTATaGTCTCCTTGGGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LPFSSYLPSITGIQAEQGATNFL*SPWVFC
Trigger: GCAGAACACCCAAGGAGACAATAGAAAATTTGTTGC...GCCCTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TTACTCCCATTTTCTTCCTACCTCCCAAGTATCACTGGGATACAAGCAGAACAGGTTGGACTGTGGTGCTaGGCAAAGTGGCTGATTTCT +
Preference number: 5 (lower is better)
Translates to: LLPFSSYLPSITGIQAEQVGLWC*AKWLIS
Trigger: AGAAATCAGCCACTTTGCCAAGCACCACAGTCCAAC...CTGTTCTGCTTGTATCCCAGTGATACTTGGGAGGTAGGAAGAAAATGGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp TTTACCAAACCCTCAGCAGTCAGCGTCTTCTCTTCAGTCATTCTGTaGAACAAATTTTCTATTGTCTCCTTGGGTGTTCTGCCCTCACAG +
Preference number: 5 (lower is better)
Translates to: FTKPSAVSVFSSVIL*NKFSIVSLGVLPSQ
Trigger: CTGTGAGGGCAGAACACCCAAGGAGACAATAGAAAATTTGTTGCACAGAATGACTGAAGAGAAGACGCTGACTGCTGAGGGTTTGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 90 bp TTGTACTCAATCTTCTGTTGGATGGCCTCCAAGATCAACTGGTTATaGCTCAGGATTGTTTCTAAAGTGGCATGTTCTGGGGTGGTCACT +
Preference number: 5 (lower is better)
Translates to: LYSIFCWMASKINWL*LRIVSKVACSGVVT
Trigger: AGTGACCACCCCAGAACATGCCACTTTAGAAACAATCCTGAGGCATAACCAGTTGATCTTGGAGGCCATCCAACAGAAGATTGAGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 90 bp AAGAGCTTGTACTCAATCTTCTGTTGGATGGCCTCCAAGATCAACTaGTTATGCCTCAGGATTGTTTCTAAAGTGGCATGTTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: KSLYSIFCWMASKIN*LCLRIVSKVACSGV
Trigger: CACCCCAGAACATGCCACTTTAGAAACAATCCTGAGGCATAACCAGTTGATCTTGGAGGCCATCCAACAGAAGATTGAGTACAAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 90 bp CAGTCTCTCCTTGATCATTCTGTTCCCCAGGCTGGCTGTCTTCTTTaGCTGCCTTTTCATCTTCTTTGTTGTTGGCTTCAAGGTGAAATT +
Preference number: 5 (lower is better)
Translates to: QSLLDHSVPQAGCLL*LPFHLLCCWLQGEI
Trigger: AATTTCACCTTGAAGCCAACAACAAAGAAGATGAAAAGGCAGCCAAAGAAGACAGCCAGCCTGGGGAACAGAATGATCAAGGAGAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATGCCTCACTAAAGGTTaGCACAGCAGGGGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRCLTKG*HSRGGG
Trigger: TCCCCCTCCCCTGCTGTGCAAACCTTTAGTGAGGCA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TGGACTCAGGAGACCACACAAACACTGTCCTCTATGGCAGCAATTCAGGTCTCTACACATTCCCCCAATTaGGAAGCAATCTTAATTAGC +
Preference number: 5 (lower is better)
Translates to: WTQETTQTLSSMAAIQVSTHSPN*EAILIS
Trigger: GCTAATTAAGATTGCTTCCAAATTGGGGGAATGTGT...AGAGACCTGAATTGCTGCCATAGAGGACAGTGTTTGTGTGGTCTCCTGAGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 90 bp AACATCTGTAGACTGTCTGCTAAGGAGATGATTTTGGAGAAGTTGTaGTTGCCCACAGGTAGTTTGCCCGTGTACATCATTTCCAACAAG +
Preference number: 5 (lower is better)
Translates to: NICRLSAKEMILEKL*LPTGSLPVYIISNK
Trigger: CTTGTTGGAAATGATGTACACGGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAAAATCATCTCCTTAGCAGACAGTCTACAGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 90 bp CTCTCCTTGATCATTCTGTTCCCCAGGCTGGCTGTCTTCTTTGGCTaGCTTTTCATCTTCTTTGTTGTTGGCTTCAAGGTGAAATTTATT +
Preference number: 5 (lower is better)
Translates to: LSLIILFPRLAVFFG*LFIFFVVGFKVKFI
Trigger: AATAAATTTCACCTTGAAGCCAACAACAAAGAAGATGAAAAGGCAGCCAAAGAAGACAGCCAGCCTGGGGAACAGAATGATCAAGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 90 bp CAGGCTGGCTGTCTTCTTTGGCTGCCTTTTCATCTTCTTTGTTGTTaGCTTCAAGGTGAAATTTATTACTCACCTTCCACGTTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: QAGCLLWLPFHLLCC*LQGEIYYSPSTFPS
Trigger: AGAAGGAAACGTGGAAGGTGAGTAATAAATTTCACCTTGAAGCCAACAACAAAGAAGATGAAAAGGCAGCCAAAGAAGACAGCCAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACAGGGACACAACAGTTaGAACATCCAGGCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRQGHNS*NIQAFL
Trigger: GAGGAAAGCCTGGATGTTCAAACTGTTGTGTCCCTG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp TCTTCTTTGGCTGCCTTTTCATCTTCTTTGTTGTTGGCTTCAAGGTaGAATTTATTACTCACCTTCCACGTTTCCTTCTCTCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: SSLAAFSSSLLLASR*NLLLTFHVSFSPSS
Trigger: GGAAGATGGAGAGAAGGAAACGTGGAAGGTGAGTAATAAATTTCACCTTGAAGCCAACAACAAAGAAGATGAAAAGGCAGCCAAAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 90 bp AACACTTGTATGAATATAAATAAAGCACCTGGTTCATTGCAGCACTaGCTGCATGGTACCAACGCTATTCAAAGCAGGAGAAACTCTGAA +
Preference number: 5 (lower is better)
Translates to: NTCMNINKAPGSLQH*LHGTNAIQSRRNSE
Trigger: TTCAGAGTTTCTCCTGCTTTGAATAGCGTTGGTACCATGCAGCCAGTGCTGCAATGAACCAGGTGCTTTATTTATATTCATACAAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400239.6
ENST00000404138.5
CDS-3UTR CAA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACTAGGTGAGACTGTGTaGGTTGGTGCTAAGCTAAGA +
Preference number: 5 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRLGETV*VGAKLR
Trigger: TCTTAGCTTAGCACCAACCAACACAGTCTCACCTAG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGATCTGCATGTTCTGCTTaGATGTGCTTCTTGTGCTCA +
Preference number: 5 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRSACSA*MCFLCS
Trigger: TGAGCACAAGAAGCACATCAAAGCAGAACATGCAGA...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACCCTTCAGCCCCAAATaGTTCTCTTACTCCCATTTT +
Preference number: 5 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRPFSPK*FSYSHF
Trigger: AAAATGGGAGTAAGAGAACAATTTGGGGCTGAAGGG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS-3UTR CAA 90 bp TTGAAAGGATCTGACACTGGAATTCAAAATTTACAGCCCTCTTTATTCCGAAGACTGGTCAGAAGATTTTaGCAGCTAACAGCTACATCA +
Preference number: 5 (lower is better)
Translates to: LKGSDTGIQNLQPSLFRRLVRRF*QLTATS
Trigger: TGATGTAGCTGTTAGCTGCAAAAATCTTCTGACCAG...TCTTCGGAATAAAGAGGGCTGTAAATTTTGAATTCCAGTGTCAGATCCTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 90 bp AACTTGTCATGTGTGAGATCATCTTTAATAAAATCTGGTTGTCTGTaGAAATCTCAGAGAGGTTTTCATGATAGCGTCTCAATAGCTCAG +
Preference number: 5 (lower is better)
Translates to: NLSCVRSSLIKSGCL*KSQRGFHDSVSIAQ
Trigger: CTGAGCTATTGAGACGCTATCATGAAAACCTCTCTGAGATTTTCACAGACAACCAGATTTTATTAAAGATGATCTCACACATGACAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS TCA 72 bp ACACCTGCGACCCGGCAAGCTGGGTCTCCTCCAAAGTaGTCACCTGCTCTGTCGGGGCCACCGGCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: TPATRQAGSPPK*SPALSGPPALG
Trigger: CCCCAGAGCCGGTGGCCCCGACAGAGCAGGTGATCACTTTGGAGGAGACCCAGCTTGCCGGGTCGCAGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 72 bp TTGCAGATCCCGCAGCTGAAGGGCTTCCCTCCAACGTaGGTCACCACGTGCCGCTCCAGCATGGACGGGGCA +
Preference number: 6 (lower is better)
Translates to: LQIPQLKGFPPT*VTTCRSSMDGA
Trigger: TGCCCCGTCCATGCTGGAGCGGCACGTGGTGACCCACGTTGGAGGGAAGCCCTTCAGCTGCGGGATCTGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp GACCCGGCAAGCTGGGTCTCCTCCAAAGTGATCACCTaGTCTGTCGGGGCCACCGGCTCTGGGGTTTGGATC +
Preference number: 6 (lower is better)
Translates to: DPASWVSSKVIT*SVGATGSGVWI
Trigger: GATCCAAACCCCAGAGCCGGTGGCCCCGACAGAGCAGGTGATCACTTTGGAGGAGACCCAGCTTGCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp CAGCTGAAGGGCTTCCCTCCAACGTGGGTCACCACGTaGCGCTCCAGCATGGACGGGGCACTGAAGATCTTC +
Preference number: 6 (lower is better)
Translates to: QLKGFPPTWVTT*RSSMDGALKIF
Trigger: GAAGATCTTCAGTGCCCCGTCCATGCTGGAGCGGCACGTGGTGACCCACGTTGGAGGGAAGCCCTTCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 72 bp CGGAATGGCTGGGACCCTGAATGCTGGCACTTGACATaGACCTGCAGCAAGGCTGGCGTGGGGAAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: RNGWDPECWHLT*TCSKAGVGKSS
Trigger: GGAGCTCTTCCCCACGCCAGCCTTGCTGCAGGTTCATGTCAAGTGCCAGCATTCAGGGTCCCAGCCATTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 72 bp AGGCAGTGCTTGCACATGAACGGGCGGTCCCCGGTGTaGAGGCGAAGGTGGTTCTTCAGGGTGGAATTGGCT +
Preference number: 6 (lower is better)
Translates to: RQCLHMNGRSPV*RRRWFFRVELA
Trigger: AGCCAATTCCACCCTGAAGAACCACCTTCGCCTTCACACCGGGGACCGCCCGTTCATGTGCAAGCACTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 72 bp ACAATTGCTGGTAGGCCTTGTTGCAGATCCCGCAGCTaGAGGGCTTCCCTCCAACGTGGGTCACCACGTGCC +
Preference number: 6 (lower is better)
Translates to: TIAGRPCCRSRS*RASLQRGSPRA
Trigger: GGCACGTGGTGACCCACGTTGGAGGGAAGCCCTTCAGCTGCGGGATCTGCAACAAGGCCTACCAGCAATTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp CTGCAGCAGCTGCCGGCTGTAGTTGGGGAGCTCCATTaGGTCAACTCTGCCCCAAGAACTGCTCTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: LQQLPAVVGELH*VNSAPRTALPL
Trigger: GAGAGGAAGAGCAGTTCTTGGGGCAGAGTTGACGCAATGGAGCTCCCCAACTACAGCCGGCAGCTGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 72 bp TGGGGCCTCCTCTCTGCTGCAAACGCAGGAAGGCTCTaGCGGATGAAAGGCTGCTCATTTGGCCTCACCACA +
Preference number: 6 (lower is better)
Translates to: WGLLSAANAGRL*RMKGCSFGLTT
Trigger: TGTGGTGAGGCCAAATGAGCAGCCTTTCATCCGGCAGAGCCTTCCTGCGTTTGCAGCAGAGAGGAGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 72 bp GAGTGTACAGCTGCTGCAGCAGCTGCCGGCTGTAGTTaGGGAGCTCCATTGCGTCAACTCTGCCCCAAGAAC +
Preference number: 6 (lower is better)
Translates to: ECTAAAAAAGCS*GAPLRQLCPKN
Trigger: GTTCTTGGGGCAGAGTTGACGCAATGGAGCTCCCCAACTACAGCCGGCAGCTGCTGCAGCAGCTGTACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CAA 90 bp TGTACAGCTGCTGCAGCAGCTGCCGGCTGTAGTTGGGGAGCTCCATaGCGTCAACTCTGCCCCAAGAACTGCTCTTCCTCTCCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: CTAAAAAAGCSWGAP*RQLCPKNCSSSPLL
Trigger: AAGGAGAGGAGAGGAAGAGCAGTTCTTGGGGCAGAGTTGACGCAATGGAGCTCCCCAACTACAGCCGGCAGCTGCTGCAGCAGCTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS TCA 72 bp GAGTTCCCCACAGAGCTCACAGGGGAAGGTGGTCTCTaGCTGCTTGAAGTGCTCCGTGGTGACATGGTGCTG +
Preference number: 6 (lower is better)
Translates to: EFPTELTGEGGL*LLEVLRGDMVL
Trigger: CAGCACCATGTCACCACGGAGCACTTCAAGCAGTCAGAGACCACCTTCCCCTGTGAGCTCTGTGGGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp CTTCTTCTTCTTCTTGGGGGCATCGGGCTCTCCACCTaGACCATGGGCCTCCAGCTGATGTTTGTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LLLLLGGIGLST*TMGLQLMFVQL
Trigger: GAGCTGGACAAACATCAGCTGGAGGCCCATGGTGCAGGTGGAGAGCCCGATGCCCCCAAGAAGAAGAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp CACAGTCACCGCCACGAGCTCAGAGCTGGCCTGAGATaGCTGAGAATCTGGCAACGTCACAAACACCTGCGA +
Preference number: 6 (lower is better)
Translates to: HSHRHELRAGLR*LRIWQRHKHLR
Trigger: TCGCAGGTGTTTGTGACGTTGCCAGATTCTCAGGCATCTCAGGCCAGCTCTGAGCTCGTGGCGGTGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp CTGCTCATTTGGCCTCACCACAGATCAGCGTCACTGTaGCATCCAGCAAGTCCTCCACAGTCACCGCCACGA +
Preference number: 6 (lower is better)
Translates to: LLIWPHHRSASL*HPASPPQSPPR
Trigger: TCGTGGCGGTGACTGTGGAGGACTTGCTGGATGGCACAGTGACGCTGATCTGTGGTGAGGCCAAATGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 72 bp GGTCCCCGGTGTGAAGGCGAAGGTGGTTCTTCAGGGTaGAATTGGCTGCAAACTTCGCCCCACACTCTTCAC +
Preference number: 6 (lower is better)
Translates to: GPRCEGEGGSSG*NWLQTSPHTLH
Trigger: GTGAAGAGTGTGGGGCGAAGTTTGCAGCCAATTCCACCCTGAAGAACCACCTTCGCCTTCACACCGGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 72 bp GCAAGTCCTCCACAGTCACCGCCACGAGCTCAGAGCTaGCCTGAGATGCCTGAGAATCTGGCAACGTCACAA +
Preference number: 6 (lower is better)
Translates to: ASPPQSPPRAQS*PEMPENLATSQ
Trigger: TTGTGACGTTGCCAGATTCTCAGGCATCTCAGGCCAGCTCTGAGCTCGTGGCGGTGACTGTGGAGGACTTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 72 bp CGCAGGAAGGCTCTGCCGGATGAAAGGCTGCTCATTTaGCCTCACCACAGATCAGCGTCACTGTGCCATCCA +
Preference number: 6 (lower is better)
Translates to: RRKALPDERLLI*PHHRSASLCHP
Trigger: TGGATGGCACAGTGACGCTGATCTGTGGTGAGGCCAAATGAGCAGCCTTTCATCCGGCAGAGCCTTCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CAA 72 bp AGGTCACATGTCACTGGAAGCCTCTTCTTCTTCTTCTaGGGGGCATCGGGCTCTCCACCTGCACCATGGGCC +
Preference number: 6 (lower is better)
Translates to: RSHVTGSLFFFF*GASGSPPAPWA
Trigger: GGCCCATGGTGCAGGTGGAGAGCCCGATGCCCCCAAGAAGAAGAAGAAGAGGCTTCCAGTGACATGTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 72 bp TCCGTGCTCATCACCTTTGGGTGCTCAGATTCCAGGTaGCTGTCAAGCTGGGCCTGGGAGGTGAAGAGTTCC +
Preference number: 6 (lower is better)
Translates to: SVLITFGCSDSR*LSSWAWEVKSS
Trigger: GGAACTCTTCACCTCCCAGGCCCAGCTTGACAGTCACCTGGAATCTGAGCACCCAAAGGTGATGAGCACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 72 bp TCCTCTCTGCTGCAAACGCAGGAAGGCTCTGCCGGATaGAAGGCTGCTCATTTGGCCTCACCACAGATCAGC +
Preference number: 6 (lower is better)
Translates to: SSLLQTQEGSAG*KAAHLASPQIS
Trigger: GCTGATCTGTGGTGAGGCCAAATGAGCAGCCTTTCATCCGGCAGAGCCTTCCTGCGTTTGCAGCAGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp GCCGGCTGTAGTTGGGGAGCTCCATTGCGTCAACTCTaGCCCAAGAACTGCTCTTCCTCTCCTCTCCTTAGA +
Preference number: 6 (lower is better)
Translates to: AGCSWGAPLRQL*PKNCSSSPLLR
Trigger: TCTAAGGAGAGGAGAGGAAGAGCAGTTCTTGGGGCAGAGTTGACGCAATGGAGCTCCCCAACTACAGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 72 bp CAATGGAGATGGTGCAATCACAGAACTGCTGCTCCTTaGACAGAGTGTACAGCTGCTGCAGCAGCTGCCGGC +
Preference number: 6 (lower is better)
Translates to: QWRWCNHRTAAP*TECTAAAAAAG
Trigger: GCCGGCAGCTGCTGCAGCAGCTGTACACTCTGTGCAAGGAGCAGCAGTTCTGTGATTGCACCATCTCCATTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 72 bp AGCTCACAGGGGAAGGTGGTCTCTGACTGCTTGAAGTaGTCCGTGGTGACATGGTGCTGCAATGCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: SSQGKVVSDCLK*SVVTWCCNAPG
Trigger: TCCTGGAGCATTGCAGCACCATGTCACCACGGAGCACTTCAAGCAGTCAGAGACCACCTTCCCCTGTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp GCTGCAAACGCAGGAAGGCTCTGCCGGATGAAAGGCTaGTCATTTGGCCTCACCACAGATCAGCGTCACTGT +
Preference number: 6 (lower is better)
Translates to: AANAGRLCRMKG*SFGLTTDQRHC
Trigger: ACAGTGACGCTGATCTGTGGTGAGGCCAAATGAGCAGCCTTTCATCCGGCAGAGCCTTCCTGCGTTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 72 bp AGATCTTCCCACACGTGGGGCAGGGGTGGTACTCTTTaGAGTGCACCTCATGGATGTGCTTCCGGTGATCCT +
Preference number: 6 (lower is better)
Translates to: RSSHTWGRGGTL*SAPHGCASGDP
Trigger: AGGATCACCGGAAGCACATCCATGAGGTGCACTCCAAAGAGTACCACCCCTGCCCCACGTGTGGGAAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CAA 72 bp TCCTTGGTCTCACTGCACTCCTTACACTGCACCTGTTaGCTCTTAGCCACCCGGCAGCGCTTCATGTGCACC +
Preference number: 6 (lower is better)
Translates to: SLVSLHSLHCTC*LLATRQRFMCT
Trigger: GGTGCACATGAAGCGCTGCCGGGTGGCTAAGAGCAAACAGGTGCAGTGTAAGGAGTGCAGTGAGACCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CAA 72 bp CCACAGAGCTCACAGGGGAAGGTGGTCTCTGACTGCTaGAAGTGCTCCGTGGTGACATGGTGCTGCAATGCT +
Preference number: 6 (lower is better)
Translates to: PQSSQGKVVSDC*KCSVVTWCCNA
Trigger: AGCATTGCAGCACCATGTCACCACGGAGCACTTCAAGCAGTCAGAGACCACCTTCCCCTGTGAGCTCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp TGGGGAGCTCCATTGCGTCAACTCTGCCCCAAGAACTaGTCTTCCTCTCCTCTCCTTAGAGTTGGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: WGAPLRQLCPKN*SSSPLLRVGFG
Trigger: CCCAAAGCCAACTCTAAGGAGAGGAGAGGAAGAGCAGTTCTTGGGGCAGAGTTGACGCAATGGAGCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 72 bp AGCTTCAGCTGTAGTAGGAGTCTCCGCTGGGGTTTCTaGATTCCTCTGGCTCTCCTGGGCTGTGGGAGAATT +
Preference number: 6 (lower is better)
Translates to: SFSCSRSLRWGF*IPLALLGCGRI
Trigger: AATTCTCCCACAGCCCAGGAGAGCCAGAGGAATGCAGAAACCCCAGCGGAGACTCCTACTACAGCTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp GTAGTAGGAGTCTCCGCTGGGGTTTCTGCATTCCTCTaGCTCTCCTGGGCTGTGGGAGAATTCACACTCATC +
Preference number: 6 (lower is better)
Translates to: VVGVSAGVSAFL*LSWAVGEFTLI
Trigger: GATGAGTGTGAATTCTCCCACAGCCCAGGAGAGCCAGAGGAATGCAGAAACCCCAGCGGAGACTCCTACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp CGGTGTGAAGGCGAAGGTGGTTCTTCAGGGTGGAATTaGCTGCAAACTTCGCCCCACACTCTTCACAGGAGA +
Preference number: 6 (lower is better)
Translates to: RCEGEGGSSGWN*LQTSPHTLHRR
Trigger: TCTCCTGTGAAGAGTGTGGGGCGAAGTTTGCAGCCAATTCCACCCTGAAGAACCACCTTCGCCTTCACACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 72 bp GTGTGGGTCCTCACGTGGCGGGACAGCTCAATAGACTaGGCAAACACAGCATCACAGTACTGGCATGCATAC +
Preference number: 6 (lower is better)
Translates to: VWVLTWRDSSID*ANTASQYWHAY
Trigger: GTATGCATGCCAGTACTGTGATGCTGTGTTTGCCCAGTCTATTGAGCTGTCCCGCCACGTGAGGACCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CAA 90 bp AAGAGTTCCCCACAGAGCTCACAGGGGAAGGTGGTCTCTGACTGCTaGAAGTGCTCCGTGGTGACATGGTGCTGCAATGCTCCAGGAAAA +
Preference number: 6 (lower is better)
Translates to: KSSPQSSQGKVVSDC*KCSVVTWCCNAPGK
Trigger: TTTTCCTGGAGCATTGCAGCACCATGTCACCACGGAGCACTTCAAGCAGTCAGAGACCACCTTCCCCTGTGAGCTCTGTGGGGAACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 72 bp CCCTGTTCAGCACCGATTCAAACTGCCGTTCTTTATTaGCAGCGCCATAGAGGACACGAACACTCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: PCSAPIQTAVLY*QRHRGHEHSCP
Trigger: CGGGCAGGAGTGTTCGTGTCCTCTATGGCGCTGTCAATAAAGAACGGCAGTTTGAATCGGTGCTGAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374651.8
ENST00000375647.5
CDS TCA 72 bp GGAGGCTGGCAGCAGCCAGGACAAGCTTGTGAGCCCTaGAGTAAATGGTACCAATGGAGATGGTGCAATCAC +
Preference number: 6 (lower is better)
Translates to: GGWQQPGQACEP*SKWYQWRWCNH
Trigger: GTGATTGCACCATCTCCATTGGTACCATTTACTTCAGGGCTCACAAGCTTGTCCTGGCTGCTGCCAGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS TCA 72 bp TCCATGAGCAGGTCCAATGGACAGGTCTTTGTCTCCTaGACCACCAGCAGCAGTTGCCAAATGGCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: SMSRSNGQVFVS*TTSSSCQMAVA
Trigger: TGCCACAGCCATTTGGCAACTGCTGCTGGTGGTTCAGGAGACAAAGACCTGTCCATTGGACCTGCTCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS GCA 72 bp GTGAAGGCGAAGGTGGTTCTTCAGGGTGGAATTGGCTaGAAACTTCGCCCCACACTCTTCACAGGAGAAAGG +
Preference number: 6 (lower is better)
Translates to: VKAKVVLQGGIG*KLRPTLFTGER
Trigger: CCTTTCTCCTGTGAAGAGTGTGGGGCGAAGTTTGCAGCCAATTCCACCCTGAAGAACCACCTTCGCCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 72 bp AGAAGGCCCAGGTTTGGGAAAGTCGTCTTCACAGCCTaGAGGAGTTTTACCAAACCCTCAGCAGTCAGCGTC +
Preference number: 6 (lower is better)
Translates to: RRPRFGKVVFTA*RSFTKPSAVSV
Trigger: GACGCTGACTGCTGAGGGTTTGGTAAAACTCCTCCAGGCTGTGAAGACGACTTTCCCAAACCTGGGCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp AGGCTCCCTTCGTATTTCCTCCATGAGCAGGTCCAATaGACAGGTCTTTGTCTCCTGAACCACCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: RLPSYFLHEQVQ*TGLCLLNHQQQ
Trigger: CTGCTGCTGGTGGTTCAGGAGACAAAGACCTGTCCATTGGACCTGCTCATGGAGGAAATACGAAGGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS TCA 72 bp TGCTGTTCAGCACCGATTCAAACTGCCGTTCTTTATTaGCAGCGCCATAGAGGACACGAACACTCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: CCSAPIQTAVLY*QRHRGHEHSCP
Trigger: CGGGCAGGAGTGTTCGTGTCCTCTATGGCGCTGTCAATAAAGAACGGCAGTTTGAATCGGTGCTGAACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400239.6
ENST00000404138.5
CDS GCA 72 bp CAACAAGAGCGCAAACTCCTCGGGGCTCACCACAGATaGATCGATGGAGATGGTATCTGTGTTATCCAGCAG +
Preference number: 6 (lower is better)
Translates to: QQERKLLGAHHR*IDGDGICVIQQ
Trigger: CTGCTGGATAACACAGATACCATCTCCATCGATGCATCTGTGGTGAGCCCCGAGGAGTTTGCGCTCTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 72 bp TCTGACTGCTTGAAGTGCTCCGTGGTGACATGGTGCTaGAATGCTCCAGGAAAACGGAAAGTAGCAGCACAG +
Preference number: 6 (lower is better)
Translates to: SDCLKCSVVTWC*NAPGKRKVAAQ
Trigger: CTGTGCTGCTACTTTCCGTTTTCCTGGAGCATTGCAGCACCATGTCACCACGGAGCACTTCAAGCAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 72 bp CATCAGGGCTTGGTTGGACTGTGGTGCTTGGCAAAGTaGCTGATTTCTGCAACTTCTCTAGCAGAAGGCCCA +
Preference number: 6 (lower is better)
Translates to: HQGLVGLWCLAK*LISATSLAEGP
Trigger: TGGGCCTTCTGCTAGAGAAGTTGCAGAAATCAGCCACTTTGCCAAGCACCACAGTCCAACCAAGCCCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp GGTGGCATATTTCAATGGCCGGGACTGATTTTTCCATaGCTCTGCTCAGCACTGCTCTCAGGGAAGCTTCAG +
Preference number: 6 (lower is better)
Translates to: GGIFQWPGLIFP*LCSALLSGKLQ
Trigger: CTGAAGCTTCCCTGAGAGCAGTGCTGAGCAGAGCCATGGAAAAATCAGTCCCGGCCATTGAAATATGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp AATGTATGCCAACTCCTGCATGACAGGCTGCAGGCCTaGAAAAGATTTGTGGACACTGCACAGGAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: NVCQLLHDRLQA*KRFVDTAQEVA
Trigger: TGCCACCTCCTGTGCAGTGTCCACAAATCTTTTCCAGGCCTGCAGCCTGTCATGCAGGAGTTGGCATACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp AAGGATCTTCTATGTTGTGAAAGGTGTGCAGATGGATaGAGAGGCCATTGGCTTGCCGGAAGCCCTTGCCAC +
Preference number: 6 (lower is better)
Translates to: KDLLCCERCADG*RGHWLAGSPCH
Trigger: GTGGCAAGGGCTTCCGGCAAGCCAATGGCCTCTCCATCCATCTGCACACCTTTCACAACATAGAAGATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 72 bp CACTGGAGTGATGAGAACTTGGAAGATCGGTGGTTCTaGGCAGCAAATACGTCAGGGTGGTGGGTTCGATTG +
Preference number: 6 (lower is better)
Translates to: HWSDENLEDRWF*AANTSGWWVRL
Trigger: CAATCGAACCCACCACCCTGACGTATTTGCTGCTCAGAACCACCGATCTTCCAAGTTCTCATCACTCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS TCA 72 bp CATCCGGGATGTTTCCCCAACCTCAGCACATGGCTCTaGCCTTTCAATCCAATATTCCAACCGGCAAGAAGG +
Preference number: 6 (lower is better)
Translates to: HPGCFPNLSTWL*PFNPIFQPARR
Trigger: CCTTCTTGCCGGTTGGAATATTGGATTGAAAGGTCAGAGCCATGTGCTGAGGTTGGGGAAACATCCCGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650433.1
CDS GCA 72 bp GGTTCTGTGCTTGTCTTCTTTGCCTCACTAAAGGTTTaGACAGCAGGGGAGGGGGAACAAGCTTCAGCTGTA +
Preference number: 6 (lower is better)
Translates to: GSVLVFFASLKV*TAGEGEQASAV
Trigger: TACAGCTGAAGCTTGTTCCCCCTCCCCTGCTGTGCAAACCTTTAGTGAGGCAAAGAAGACAAGCACAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp GCACCTCATGGATGTGCTTCCGGTGATCCTGAAGAGTaGGGAAACTCATCCTGCACTTCTTGCAGTCATAAG +
Preference number: 6 (lower is better)
Translates to: APHGCASGDPEE*GNSSCTSCSHK
Trigger: CTTATGACTGCAAGAAGTGCAGGATGAGTTTCCCCACTCTTCAGGATCACCGGAAGCACATCCATGAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CAA 90 bp GCTAAGGAGATGATTTTGGAGAAGTTGTGCTTGCCCACAGGTAGTTaGCCCGTGTACATCATTTCCAACAAGAGCGCAAACTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: AKEMILEKLCLPTGS*PVYIISNKSANSSG
Trigger: CCCCGAGGAGTTTGCGCTCTTGTTGGAAATGATGTACACGGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAAAATCATCTCCTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CAA 90 bp GCAAAGTGGCTGATTTCTGCAACTTCTCTAGCAGAAGGCCCAGGTTaGGGAAAGTCGTCTTCACAGCCTGGAGGAGTTTTACCAAACCCT +
Preference number: 6 (lower is better)
Translates to: AKWLISATSLAEGPG*GKSSSQPGGVLPNP
Trigger: AGGGTTTGGTAAAACTCCTCCAGGCTGTGAAGACGACTTTCCCAAACCTGGGCCTTCTGCTAGAGAAGTTGCAGAAATCAGCCACTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CAA 90 bp TCTTCTGTTGGATGGCCTCCAAGATCAACTGGTTATGCCTCAGGATaGTTTCTAAAGTGGCATGTTCTGGGGTGGTCACTGCCCGGAAGA +
Preference number: 6 (lower is better)
Translates to: SSVGWPPRSTGYASG*FLKWHVLGWSLPGR
Trigger: TCTTCCGGGCAGTGACCACCCCAGAACATGCCACTTTAGAAACAATCCTGAGGCATAACCAGTTGATCTTGGAGGCCATCCAACAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS GCA 72 bp TTTCCTTTCACATCCTGGTTCTGTGCTTGTCTTCTTTaGCTCACTAAAGGTTTGCACAGCAGGGGAGGGGGA +
Preference number: 6 (lower is better)
Translates to: FPFTSWFCACLL*LTKGLHSRGGG
Trigger: TCCCCCTCCCCTGCTGTGCAAACCTTTAGTGAGGCAAAGAAGACAAGCACAGAACCAGGATGTGAAAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 72 bp GGAATGCTCAGAATCTCTTTCACAGTCTCTGCCAGGTaGTCCTCCTCCGAGGTAAAGAGCTTGTACTCAATC +
Preference number: 6 (lower is better)
Translates to: GMLRISFTVSAR*SSSEVKSLYSI
Trigger: GATTGAGTACAAGCTCTTTACCTCGGAGGAGGAGCACCTGGCAGAGACTGTGAAAGAGATTCTGAGCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp TCTTTGTCTCCTGAACCACCAGCAGCAGTTGCCAAATaGCTGTGGCAGAGAGAGTCTGCTTTTCTAGAACTG +
Preference number: 6 (lower is better)
Translates to: SLSPEPPAAVAK*LWQRESAFLEL
Trigger: CAGTTCTAGAAAAGCAGACTCTCTCTGCCACAGCCATTTGGCAACTGCTGCTGGTGGTTCAGGAGACAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp GAGAAAGGCTTCTCATCGAAGTGCTCTGTCAGCTTATaGTACTGCATGCCTGAGGCATGGGCAAATTCTCTG +
Preference number: 6 (lower is better)
Translates to: EKGFSSKCSVSL*YCMPEAWANSL
Trigger: CAGAGAATTTGCCCATGCCTCAGGCATGCAGTACCATAAGCTGACAGAGCACTTCGATGAGAAGCCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 72 bp TGCAGCAAGGCTGGCGTGGGGAAGAGCTCCTTACACTaGTCACATTCATGGAACTTCATATCTGCATGTTCT +
Preference number: 6 (lower is better)
Translates to: CSKAGVGKSSLH*SHSWNFISACS
Trigger: AGAACATGCAGATATGAAGTTCCATGAATGTGACCAGTGTAAGGAGCTCTTCCCCACGCCAGCCTTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CAA 72 bp GGATGGCCTCCAAGATCAACTGGTTATGCCTCAGGATaGTTTCTAAAGTGGCATGTTCTGGGGTGGTCACTG +
Preference number: 6 (lower is better)
Translates to: GWPPRSTGYASG*FLKWHVLGWSL
Trigger: CAGTGACCACCCCAGAACATGCCACTTTAGAAACAATCCTGAGGCATAACCAGTTGATCTTGGAGGCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CAA 90 bp CAGGTGCTCCTCCTCCGAGGTAAAGAGCTTGTACTCAATCTTCTGTaGGATGGCCTCCAAGATCAACTGGTTATGCCTCAGGATTGTTTC +
Preference number: 6 (lower is better)
Translates to: QVLLLRGKELVLNLL*DGLQDQLVMPQDCF
Trigger: GAAACAATCCTGAGGCATAACCAGTTGATCTTGGAGGCCATCCAACAGAAGATTGAGTACAAGCTCTTTACCTCGGAGGAGGAGCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CAA 90 bp TCTTTCACAGTCTCTGCCAGGTGCTCCTCCTCCGAGGTAAAGAGCTaGTACTCAATCTTCTGTTGGATGGCCTCCAAGATCAACTGGTTA +
Preference number: 6 (lower is better)
Translates to: SFTVSARCSSSEVKS*YSIFCWMASKINWL
Trigger: TAACCAGTTGATCTTGGAGGCCATCCAACAGAAGATTGAGTACAAGCTCTTTACCTCGGAGGAGGAGCACCTGGCAGAGACTGTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CAA 90 bp TCTGCTTTGATGTGCTTCTTGTGCTCAATGGTGTTGGGGAAGGTTTaGTCACAGGAGCTGCACTGGAGTGATGAGAACTTGGAAGATCGG +
Preference number: 6 (lower is better)
Translates to: SALMCFLCSMVLGKV*SQELHWSDENLEDR
Trigger: CCGATCTTCCAAGTTCTCATCACTCCAGTGCAGCTCCTGTGACAAAACCTTCCCCAACACCATTGAGCACAAGAAGCACATCAAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp TCTTCCTTAGTAAGGACACCAATGTATGCCAACTCCTaGATGACAGGCTGCAGGCCTGGAAAAGATTTGTGG +
Preference number: 6 (lower is better)
Translates to: SSLVRTPMYANS*MTGCRPGKDLW
Trigger: CCACAAATCTTTTCCAGGCCTGCAGCCTGTCATGCAGGAGTTGGCATACATTGGTGTCCTTACTAAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp AGATCAACTGGTTATGCCTCAGGATTGTTTCTAAAGTaGCATGTTCTGGGGTGGTCACTGCCCGGAAGAAAG +
Preference number: 6 (lower is better)
Translates to: RSTGYASGLFLK*HVLGWSLPGRK
Trigger: CTTTCTTCCGGGCAGTGACCACCCCAGAACATGCCACTTTAGAAACAATCCTGAGGCATAACCAGTTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp TCCTCCGAGGTAAAGAGCTTGTACTCAATCTTCTGTTaGATGGCCTCCAAGATCAACTGGTTATGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: SSEVKSLYSIFC*MASKINWLCLR
Trigger: CCTGAGGCATAACCAGTTGATCTTGGAGGCCATCCAACAGAAGATTGAGTACAAGCTCTTTACCTCGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp AGGCCTGGAAAAGATTTGTGGACACTGCACAGGAGGTaGCATATTTCAATGGCCGGGACTGATTTTTCCATG +
Preference number: 6 (lower is better)
Translates to: RPGKDLWTLHRR*HISMAGTDFSM
Trigger: CATGGAAAAATCAGTCCCGGCCATTGAAATATGCCACCTCCTGTGCAGTGTCCACAAATCTTTTCCAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp CCAGCTGATGTTTGTCCAGCTCTTTCTTTGAATCCTTaGTCTCACTGCACTCCTTACACTGCACCTGTTTGC +
Preference number: 6 (lower is better)
Translates to: PADVCPALSLNP*SHCTPYTAPVC
Trigger: GCAAACAGGTGCAGTGTAAGGAGTGCAGTGAGACCAAGGATTCAAAGAAAGAGCTGGACAAACATCAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CCA 72 bp TTTTGTCACAGGAGCTGCACTGGAGTGATGAGAACTTaGAAGATCGGTGGTTCTGAGCAGCAAATACGTCAG +
Preference number: 6 (lower is better)
Translates to: FCHRSCTGVMRT*KIGGSEQQIRQ
Trigger: CTGACGTATTTGCTGCTCAGAACCACCGATCTTCCAAGTTCTCATCACTCCAGTGCAGCTCCTGTGACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CAA 72 bp CTGATTTCTGCAACTTCTCTAGCAGAAGGCCCAGGTTaGGGAAAGTCGTCTTCACAGCCTGGAGGAGTTTTA +
Preference number: 6 (lower is better)
Translates to: LISATSLAEGPG*GKSSSQPGGVL
Trigger: TAAAACTCCTCCAGGCTGTGAAGACGACTTTCCCAAACCTGGGCCTTCTGCTAGAGAAGTTGCAGAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CAA 72 bp ATGTGCTTCTTGTGCTCAATGGTGTTGGGGAAGGTTTaGTCACAGGAGCTGCACTGGAGTGATGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: MCFLCSMVLGKV*SQELHWSDENL
Trigger: CAAGTTCTCATCACTCCAGTGCAGCTCCTGTGACAAAACCTTCCCCAACACCATTGAGCACAAGAAGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp GCTTCCGGTGATCCTGAAGAGTGGGGAAACTCATCCTaGACTTCTTGCAGTCATAAGGATCTTCTATGTTGT +
Preference number: 6 (lower is better)
Translates to: ASGDPEEWGNSS*TSCSHKDLLCC
Trigger: ACAACATAGAAGATCCTTATGACTGCAAGAAGTGCAGGATGAGTTTCCCCACTCTTCAGGATCACCGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CAA 72 bp CTGTCTGCTAAGGAGATGATTTTGGAGAAGTTGTGCTaGCCCACAGGTAGTTTGCCCGTGTACATCATTTCC +
Preference number: 6 (lower is better)
Translates to: LSAKEMILEKLC*PTGSLPVYIIS
Trigger: GGAAATGATGTACACGGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAAAATCATCTCCTTAGCAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CAA 72 bp TGTAGACTGTCTGCTAAGGAGATGATTTTGGAGAAGTaGTGCTTGCCCACAGGTAGTTTGCCCGTGTACATC +
Preference number: 6 (lower is better)
Translates to: CRLSAKEMILEK*CLPTGSLPVYI
Trigger: GATGTACACGGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAAAATCATCTCCTTAGCAGACAGTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CAA 90 bp ATCTGTAGACTGTCTGCTAAGGAGATGATTTTGGAGAAGTTGTGCTaGCCCACAGGTAGTTTGCCCGTGTACATCATTTCCAACAAGAGC +
Preference number: 6 (lower is better)
Translates to: ICRLSAKEMILEKLC*PTGSLPVYIISNKS
Trigger: GCTCTTGTTGGAAATGATGTACACGGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAAAATCATCTCCTTAGCAGACAGTCTACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CAA 90 bp ACAGCTACATCAAACATCTGTAGACTGTCTGCTAAGGAGATGATTTaGGAGAAGTTGTGCTTGCCCACAGGTAGTTTGCCCGTGTACATC +
Preference number: 6 (lower is better)
Translates to: TATSNICRLSAKEMI*EKLCLPTGSLPVYI
Trigger: GATGTACACGGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAAAATCATCTCCTTAGCAGACAGTCTACAGATGTTTGATGTAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CAA 90 bp GTGGCAGAGAGAGTCTGCTTTTCTAGAACTGCTGATATCAGAGAATaGAAACCACCTGAACCAGAGTCACGTTTCACAAGCTTCTCCATG +
Preference number: 6 (lower is better)
Translates to: VAERVCFSRTADIRE*KPPEPESRFTSFSM
Trigger: CATGGAGAAGCTTGTGAAACGTGACTCTGGTTCAGGTGGTTTCAATTCTCTGATATCAGCAGTTCTAGAAAAGCAGACTCTCTCTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CAA 90 bp CATTCATGGAACTTCATATCTGCATGTTCTGCTTTGATGTGCTTCTaGTGCTCAATGGTGTTGGGGAAGGTTTTGTCACAGGAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: HSWNFISACSALMCF*CSMVLGKVLSQELH
Trigger: GTGCAGCTCCTGTGACAAAACCTTCCCCAACACCATTGAGCACAAGAAGCACATCAAAGCAGAACATGCAGATATGAAGTTCCATGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS GCA 72 bp CCCTCAGCAGTCAGCGTCTTCTCTTCAGTCATTCTGTaGAACAAATTTTCTATTGTCTCCTTGGGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: PSAVSVFSSVIL*NKFSIVSLGVL
Trigger: CAGAACACCCAAGGAGACAATAGAAAATTTGTTGCACAGAATGACTGAAGAGAAGACGCTGACTGCTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS GCA 72 bp ATCTTCTGTTGGATGGCCTCCAAGATCAACTGGTTATaGCTCAGGATTGTTTCTAAAGTGGCATGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: IFCWMASKINWL*LRIVSKVACSG
Trigger: CCCAGAACATGCCACTTTAGAAACAATCCTGAGGCATAACCAGTTGATCTTGGAGGCCATCCAACAGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CCA 72 bp AGCTCAATAGACTGGGCAAACACAGCATCACAGTACTaGCATGCATACATTTTCCCTTCTGAGTGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SSIDWANTASQY*HAYIFPSECFF
Trigger: GAAGAAGCACTCAGAAGGGAAAATGTATGCATGCCAGTACTGTGATGCTGTGTTTGCCCAGTCTATTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CAA 72 bp ATGATTTTGGAGAAGTTGTGCTTGCCCACAGGTAGTTaGCCCGTGTACATCATTTCCAACAAGAGCGCAAAC +
Preference number: 6 (lower is better)
Translates to: MILEKLCLPTGS*PVYIISNKSAN
Trigger: GTTTGCGCTCTTGTTGGAAATGATGTACACGGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CAA 72 bp TCAAACATCTGTAGACTGTCTGCTAAGGAGATGATTTaGGAGAAGTTGTGCTTGCCCACAGGTAGTTTGCCC +
Preference number: 6 (lower is better)
Translates to: SNICRLSAKEMI*EKLCLPTGSLP
Trigger: GGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAAAATCATCTCCTTAGCAGACAGTCTACAGATGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CAA 72 bp GGTCTCAGCTGTGTTACACACTGTATCAGGTCCTCTTaGTGTTCTAGTAACAGAACAGACAAGGTCTTTCCC +
Preference number: 6 (lower is better)
Translates to: GLSCVTHCIRSS*CSSNRTDKVFP
Trigger: GGGAAAGACCTTGTCTGTTCTGTTACTAGAACACAAAGAGGACCTGATACAGTGTGTAACACAGCTGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
CDS CAA 90 bp TCAAACATCTGTAGACTGTCTGCTAAGGAGATGATTTTGGAGAAGTaGTGCTTGCCCACAGGTAGTTTGCCCGTGTACATCATTTCCAAC +
Preference number: 6 (lower is better)
Translates to: SNICRLSAKEMILEK*CLPTGSLPVYIISN
Trigger: GTTGGAAATGATGTACACGGGCAAACTACCTGTGGGCAAGCACAACTTCTCCAAAATCATCTCCTTAGCAGACAGTCTACAGATGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS CAA 90 bp TCCATAATAGGTCTCAGCTGTGTTACACACTGTATCAGGTCCTCTTaGTGTTCTAGTAACAGAACAGACAAGGTCTTTCCCTCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: SIIGLSCVTHCIRSS*CSSNRTDKVFPSSV
Trigger: CACAGAGGAGGGAAAGACCTTGTCTGTTCTGTTACTAGAACACAAAGAGGACCTGATACAGTGTGTAACACAGCTGAGACCTATTATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
CDS GCA 72 bp TTCATATCTGCATGTTCTGCTTTGATGTGCTTCTTGTaGTCAATGGTGTTGGGGAAGGTTTTGTCACAGGAG +
Preference number: 6 (lower is better)
Translates to: FISACSALMCFL*SMVLGKVLSQE
Trigger: CTCCTGTGACAAAACCTTCCCCAACACCATTGAGCACAAGAAGCACATCAAAGCAGAACATGCAGATATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CAA 72 bp AGAATATTGGTACAGCCTCAACAGGGACACAACAGTTaGAACATCCAGGCTTTCCTCTCTTACTTTACCCAG +
Preference number: 6 (lower is better)
Translates to: RILVQPQQGHNS*NIQAFLSYFTQ
Trigger: CTGGGTAAAGTAAGAGAGGAAAGCCTGGATGTTCAAACTGTTGTGTCCCTGTTGAGGCTGTACCAATATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
CDS TCA 72 bp TTCCTCTCTTACTTTACCCAGGATTCTCTGGAATGCTaGATGTCCTCCTTCACCCTCGAAACATTTCACTAT +
Preference number: 6 (lower is better)
Translates to: FLSYFTQDSLEC*MSSFTLETFHY
Trigger: ATAGTGAAATGTTTCGAGGGTGAAGGAGGACATTCAGCATTCCAGAGAATCCTGGGTAAAGTAAGAGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
CDS CCA 72 bp TACTCAATCTTCTGTTGGATGGCCTCCAAGATCAACTaGTTATGCCTCAGGATTGTTTCTAAAGTGGCATGT +
Preference number: 6 (lower is better)
Translates to: YSIFCWMASKIN*LCLRIVSKVAC
Trigger: ACATGCCACTTTAGAAACAATCCTGAGGCATAACCAGTTGATCTTGGAGGCCATCCAACAGAAGATTGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
ENST00000650433.1
CDS CAA 72 bp TCTTCTCTTCAGTCATTCTGTGCAACAAATTTTCTATaGTCTCCTTGGGTGTTCTGCCCTCACAGCAATTCA +
Preference number: 6 (lower is better)
Translates to: SSLQSFCATNFL*SPWVFCPHSNS
Trigger: TGAATTGCTGTGAGGGCAGAACACCCAAGGAGACAATAGAAAATTTGTTGCACAGAATGACTGAAGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000400239.6
ENST00000404138.5
ENST00000650433.1
CDS TCA 72 bp GCTGCCTTTTCATCTTCTTTGTTGTTGGCTTCAAGGTaGAATTTATTACTCACCTTCCACGTTTCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: AAFSSSLLLASR*NLLLTFHVSFS
Trigger: AGAGAAGGAAACGTGGAAGGTGAGTAATAAATTTCACCTTGAAGCCAACAACAAAGAAGATGAAAAGGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374651.8
ENST00000375647.5
ENST00000404138.5
CDS CAA 72 bp AACACTTGTATGAATATAAATAAAGCACCTGGTTCATaGCAGCACTGGCTGCATGGTACCAACGCTATTCAA +
Preference number: 6 (lower is better)
Translates to: NTCMNINKAPGS*QHWLHGTNAIQ
Trigger: TTGAATAGCGTTGGTACCATGCAGCCAGTGCTGCAATGAACCAGGTGCTTTATTTATATTCATACAAGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400239.6
ENST00000404138.5