RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB10 (Homo sapiens)

Ensembl gene IDs: ENSG00000205189

Ensembl transcript IDs: ENST00000379091.8, ENST00000426744.5, ENST00000430430.5, ENST00000455036.8, ENST00000610895.2

Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAATTCTACAAGAGTTGTTTAATGAGGCAGCAATAGAGCCTCCCTaGAAGAGTATGGGCTTCAGAATCAGACGTGGTCAAATTCGAGCT +
Preference number: 1 (lower is better)
Translates to: EILQELFNEAAIEPP*KSMGFRIRRGQIRA
Trigger: AGCTCGAATTTGACCACGTCTGATTCTGAAGCCCATACTCTTTCAGGGAGGCTCTATTGCTGCCTCATTAAACAACTCTTGTAGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR TCA 90 bp CTACTAGGGTTATGTATCCAGGGAAAGGATCCCAAAGGCTCAGTGTaGCACCACGTATCATATGCTTGGCAACACAAAATAACTAAACGA +
Preference number: 1 (lower is better)
Translates to: LLGLCIQGKDPKGSV*HHVSYAWQHKITKR
Trigger: TCGTTTAGTTATTTTGTGTTGCCAAGCATATGATACGTGGTGTCACACTGAGCCTTTGGGATCCTTTCCCTGGATACATAACCCTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR CCA 90 bp AGTTTGGTACAGAAAAATAATACTGAAATTGAAGTTCAGGAGTCCTaGGTCCTAAAACTGACTGGAGTCACTGTAGCAACCTCTCTGGGT +
Preference number: 1 (lower is better)
Translates to: SLVQKNNTEIEVQES*VLKLTGVTVATSLG
Trigger: ACCCAGAGAGGTTGCTACAGTGACTCCAGTCAGTTTTAGGACCCAGGACTCCTGAACTTCAATTTCAGTATTATTTTTCTGTACCAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR GCA 90 bp AATCCTGAAACCATCTTATGTATTATCTCACCAACTGTTAGGACCTaGGCCAAGAAGACTGTCTTGTGTTTATCTTTCACCAAGATTCTA +
Preference number: 1 (lower is better)
Translates to: NPETILCIISPTVRT*AKKTVLCLSFTKIL
Trigger: TAGAATCTTGGTGAAAGATAAACACAAGACAGTCTTCTTGGCGCAGGTCCTAACAGTTGGTGAGATAATACATAAGATGGTTTCAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR CCA 90 bp AACATAGATCCAATAATTCAATTTCCTACACCTGCTCCCAAACACTaGTCTGCGGTGATTTGTGGTGAAAAAGAAAGAAGTTCAGATAGT +
Preference number: 1 (lower is better)
Translates to: NIDPIIQFPTPAPKH*SAVICGEKERSSDS
Trigger: ACTATCTGAACTTCTTTCTTTTTCACCACAAATCACCGCAGACCAGTGTTTGGGAGCAGGTGTAGGAAATTGAATTATTGGATCTATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR CCA 90 bp CACCACGTATCATATGCTTGGCAACACAAAATAACTAAACGAAACTaGCTTGATAGCTACATGCCATATGATACTAATAGGCAAAATCCT +
Preference number: 1 (lower is better)
Translates to: HHVSYAWQHKITKRN*LDSYMPYDTNRQNP
Trigger: AGGATTTTGCCTATTAGTATCATATGGCATGTAGCTATCAAGCCAGTTTCGTTTAGTTATTTTGTGTTGCCAAGCATATGATACGTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR TCA 90 bp ATGTGTTATGCACCTATTATGTACCAGTGTTCTAAGCACTTTACATaGATTAACGCATTTAGCTCACTCTTCTCCATTAGGATAGCTGTA +
Preference number: 1 (lower is better)
Translates to: MCYAPIMYQCSKHFT*INAFSSLFSIRIAV
Trigger: TACAGCTATCCTAATGGAGAAGAGTGAGCTAAATGCGTTAATTCATGTAAAGTGCTTAGAACACTGGTACATAATAGGTGCATAACACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTCAATTTCCTACACCTaGTCCCAAACACTGGTCTGC +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSSISYT*SQTLVC
Trigger: GCAGACCAGTGTTTGGGAGCAGGTGTAGGAAATTGA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGAAGTTCAGGAGTCCTaGGTCCTAAAACTGACTGGA +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSEVQES*VLKLTG
Trigger: TCCAGTCAGTTTTAGGACCCAGGACTCCTGAACTTC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR CAA 90 bp GATCTTCCCAAAGAGCTTTTACAAACAGCAGGCGGAAGTGTTCTTTaGTTTACAGTGTTCAAAATGCCAATGCTCCCACTAAATAATGGC +
Preference number: 2 (lower is better)
Translates to: DLPKELLQTAGGSVL*FTVFKMPMLPLNNG
Trigger: GCCATTATTTAGTGGGAGCATTGGCATTTTGAACACTGTAAACAAAAGAACACTTCCGCCTGCTGTTTGTAAAAGCTCTTTGGGAAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCACTTTGATAACTGACTaGGTATGTGGGGACTCCATG +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSTLITD*VCGDSM
Trigger: CATGGAGTCCCCACATACTCAGTCAGTTATCAAAGT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTACGTGAAATGCTGCTaGGAGTTCCACAATCAGCTA +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSYVKCC*EFHNQL
Trigger: TAGCTGATTGTGGAACTCTCAGCAGCATTTCACGTA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGCAATAGAGCCTCCCTaGAAGAGTATGGGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCAIEPP*KSMGFR
Trigger: TCTGAAGCCCATACTCTTTCAGGGAGGCTCTATTGC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGGCTCCCCTTTATTGTaGCCTTCTCCAAACAAAATC +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSGSPLL*PSPNKI
Trigger: GATTTTGTTTGGAGAAGGGCACAATAAAGGGGAGCC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGAACAGGGGTCCATATaGAAGTATCTGTCTCTGAGA +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSEQGSI*KYLSLR
Trigger: TCTCAGAGACAGATACTTCCATATGGACCCCTGTTC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR CAA 90 bp TGTATTATCTCACCAACTGTTAGGACCTGCGCCAAGAAGACTGTCTaGTGTTTATCTTTCACCAAGATTCTAACACATACCTACTTACAC +
Preference number: 2 (lower is better)
Translates to: CIISPTVRTCAKKTV*CLSFTKILTHTYLH
Trigger: GTGTAAGTAGGTATGTGTTAGAATCTTGGTGAAAGATAAACACAAGACAGTCTTCTTGGCGCAGGTCCTAACAGTTGGTGAGATAATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTTTGCTATAAGGCTTTaGCCCTACAGTTTTCACAGC +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSFAIRL*PYSFHS
Trigger: GCTGTGAAAACTGTAGGGTCAAAGCCTTATAGCAAA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCACTTTGATAACTGACTaGGTATGTGGGGACTCCATG +
Preference number: 2 (lower is better)
Translates to: NINFSTLIRWSTKGIISVTLITD*VCGDSM
Trigger: CATGGAGTCCCCACATACTCAGTCAGTTATCAAAGT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTACGTGAAATGCTGCTaGGAGTTCCACAATCAGCTA +
Preference number: 2 (lower is better)
Translates to: NINFSTLIRWSTKGIISVYVKCC*EFHNQL
Trigger: TAGCTGATTGTGGAACTCTCAGCAGCATTTCACGTA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGATGGACAGAGTGATTaGGTCAATTGTCACTGTACT +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSDGQSD*VNCHCT
Trigger: AGTACAGTGACAATTGACCCAATCACTCTGTCCATC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCTCCCTGAAAGAGTATaGGCTTCAGAATCAGACGTG +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCLPERV*ASESDV
Trigger: CACGTCTGATTCTGAAGCCCATACTCTTTCAGGGAG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCATTATAATGCTATGTaGGCTCCCCTTTATTGTGCC +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSHYNAM*APLYCA
Trigger: GGCACAATAAAGGGGAGCCCACATAGCATTATAATG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTTTGCTATAAGGCTTTaGCCCTACAGTTTTCACAGC +
Preference number: 2 (lower is better)
Translates to: NINFSTLIRWSTKGIISVFAIRL*PYSFHS
Trigger: GCTGTGAAAACTGTAGGGTCAAAGCCTTATAGCAAA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTTTTACTTTGATAACTaGCTGAGTATGTGGGGACTC +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSFYFDN*LSMWGL
Trigger: GAGTCCCCACATACTCAGTCAGTTATCAAAGTAAAA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCATGTTAACAATACGTaGAATGCTGCTGAGAGTTCC +
Preference number: 2 (lower is better)
Translates to: NINFSTLIRWSTKGIISVHVNNT*NAAESS
Trigger: GGAACTCTCAGCAGCATTTCACGTATTGTTAACATG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTCAACTTTTCAACTTTaGTCAGATGGAGCACCAAAG +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSSTFQL*SDGAPK
Trigger: CTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCACACTTTCCCCCGTATaGTACTACTACAGTGATATT +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSTLSPV*YYYSDI
Trigger: AATATCACTGTAGTAGTATCATACGGGGGAAAGTGT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTGCGGTGATTTGTGGTaGAAAAGAAAGAAGTTCAGA +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSCGDLW*KRKKFR
Trigger: TCTGAACTTCTTTCTTTTTCACCACAAATCACCGCA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGTGCCAAATACTATTTaGGTGTACTCTGGAATCTTC +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSVPNTI*VYSGIF
Trigger: GAAGATTCCAGAGTACACTCAAATAGTATTTGGCAC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGATGGACAGAGTGATTaGGTCAATTGTCACTGTACT +
Preference number: 2 (lower is better)
Translates to: NINFSTLIRWSTKGIISVDGQSD*VNCHCT
Trigger: AGTACAGTGACAATTGACCCAATCACTCTGTCCATC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGAACAGGGGTCCATATaGAAGTATCTGTCTCTGAGA +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCEQGSI*KYLSLR
Trigger: TCTCAGAGACAGATACTTCCATATGGACCCCTGTTC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCAGTAAGGAAATTTATTaGGGGGAGGAAAGACACTCA +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSSKEIY*GEERHS
Trigger: TGAGTGTCTTTCCTCCCCCCAATAAATTTCCTTACT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGAACGGCACAAAAACTaGGGTTTCTATCTAGTTCTT +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSERHKN*GFYLVL
Trigger: AAGAACTAGATAGAAACCCCAGTTTTTGTGCCGTTC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTTTGCTATAAGGCTTTaGCCCTACAGTTTTCACAGC +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCFAIRL*PYSFHS
Trigger: GCTGTGAAAACTGTAGGGTCAAAGCCTTATAGCAAA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTTTTACTTTGATAACTaGCTGAGTATGTGGGGACTC +
Preference number: 2 (lower is better)
Translates to: NINFSTLIRWSTKGIISVFYFDN*LSMWGL
Trigger: GAGTCCCCACATACTCAGTCAGTTATCAAAGTAAAA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCATGTTAACAATACGTaGAATGCTGCTGAGAGTTCC +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCHVNNT*NAAESS
Trigger: GGAACTCTCAGCAGCATTTCACGTATTGTTAACATG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGAAGCAGTTTACCTTTaGTTTTCAACCCATTTCCAA +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSEAVYL*FSTHFQ
Trigger: TTGGAAATGGGTTGAAAAGCAAAGGTAAACTGCTTC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCACACCACGTATCATATaGTTGGCAACACAAAATAAC +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSTPRII*LATQNN
Trigger: GTTATTTTGTGTTGCCAAGCATATGATACGTGGTGT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTCAACTTTGATCAGATaGAGCACCAAAGGGATTATA +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSSTLIR*STKGII
Trigger: TATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTCAAGTCTGAATATCTaGCCAGTTCTGATTTCCTTT +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSSSLNI*PVLISF
Trigger: AAAGGAAATCAGAACTGGCCAGATATTCAGACTTGA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCATAACTAAACGAAACTaGCTTGATAGCTACATGCCA +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSITKRN*LDSYMP
Trigger: TGGCATGTAGCTATCAAGCCAGTTTCGTTTAGTTAT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCACTGTTGAATCATGGTaGCTACTAGAAAGACTGTAT +
Preference number: 2 (lower is better)
Translates to: NINFSTLIRWSTKGIISVTVESW*LLERLY
Trigger: ATACAGTCTTTCTAGTAGTCACCATGATTCAACAGT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTCAACTTTTCAACTTTaGTCAGATGGAGCACCAAAG +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCSTFQL*SDGAPK
Trigger: CTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTATGATACTACTACAGTaGTATTCAGGCCGTTTACAC +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCMILLQ*YSGRLH
Trigger: GTGTAAACGGCCTGAATATCACTGTAGTAGTATCAT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTACACTTTCCCCCGTATaGTACTACTACAGTGATATT +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCTLSPV*YYYSDI
Trigger: AATATCACTGTAGTAGTATCATACGGGGGAAAGTGT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGCATGTACCATATTTTaGAAGCCTTCAAGTTCAACA +
Preference number: 2 (lower is better)
Translates to: NINFSTLIRWSTKGIISVACTIF*KPSSST
Trigger: TGTTGAACTTGAAGGCTTGCAAAATATGGTACATGC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGATCAACAAGCTATGTaGCAAATACTATTTGAGTGT +
Preference number: 2 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSDQQAM*QILFEC
Trigger: ACACTCAAATAGTATTTGGCACATAGCTTGTTGATC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTTTAAAAGATCTAGATaGGAAAAGGCAGTCCCTCGA +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCFKRSR*EKAVPR
Trigger: TCGAGGGACTGCCTTTTCCCATCTAGATCTTTTAAA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTAGTAAGGAAATTTATTaGGGGGAGGAAAGACACTCA +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCSKEIY*GEERHS
Trigger: TGAGTGTCTTTCCTCCCCCCAATAAATTTCCTTACT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTACTGTTGAATCATGGTaGCTACTAGAAAGACTGTAT +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCTVESW*LLERLY
Trigger: ATACAGTCTTTCTAGTAGTCACCATGATTCAACAGT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGACTCCATTAAGAGCTaGAATTCTACAAGAGTTGTT +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCDSIKS*NSTRVV
Trigger: AACAACTCTTGTAGAATTTCAGCTCTTAATGGAGTC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGCATGTACCATATTTTaGAAGCCTTCAAGTTCAACA +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCACTIF*KPSSST
Trigger: TGTTGAACTTGAAGGCTTGCAAAATATGGTACATGC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTCAACTTTGATCAGATaGAGCACCAAAGGGATTATA +
Preference number: 2 (lower is better)
Translates to: FIKLKCHSQLRACATLMCSTLIR*STKGII
Trigger: TATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR CCA 72 bp GCCTCCCTGAAAGAGTATGGGCTTCAGAATCAGACGTaGTCAAATTCGAGCTCTGTCACAGCTGTGTTAAAT +
Preference number: 3 (lower is better)
Translates to: ASLKEYGLQNQT*SNSSSVTAVLN
Trigger: ATTTAACACAGCTGTGACAGAGCTCGAATTTGACCACGTCTGATTCTGAAGCCCATACTCTTTCAGGGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR TCA 72 bp CAAGAGTTGTTTAATGAGGCAGCAATAGAGCCTCCCTaGAAGAGTATGGGCTTCAGAATCAGACGTGGTCAA +
Preference number: 3 (lower is better)
Translates to: QELFNEAAIEPP*KSMGFRIRRGQ
Trigger: TTGACCACGTCTGATTCTGAAGCCCATACTCTTTCAGGGAGGCTCTATTGCTGCCTCATTAAACAACTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGTGGGCTCCCCTTTATaGTGCCCTTCTCCAAACAAA +
Preference number: 3 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSVGSPL*CPSPNK
Trigger: TTTGTTTGGAGAAGGGCACAATAAAGGGGAGCCCAC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCCAAATGCAGCATCCTaGAGGAGTATAGTAGGTCAG +
Preference number: 3 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSPNAAS*RSIVGQ
Trigger: CTGACCTACTATACTCCTCAAGGATGCTGCATTTGG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCACTAGCCTGAGTGGTTaGATGGACAGAGTGATTGGG +
Preference number: 3 (lower is better)
Translates to: NINFSTLIRWSTKGIISVTSLSG*MDRVIG
Trigger: CCCAATCACTCTGTCCATCAAACCACTCAGGCTAGT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR GCA 72 bp ACCATCTTATGTATTATCTCACCAACTGTTAGGACCTaGGCCAAGAAGACTGTCTTGTGTTTATCTTTCACC +
Preference number: 3 (lower is better)
Translates to: TILCIISPTVRT*AKKTVLCLSFT
Trigger: GGTGAAAGATAAACACAAGACAGTCTTCTTGGCGCAGGTCCTAACAGTTGGTGAGATAATACATAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR CCA 72 bp CCAATAATTCAATTTCCTACACCTGCTCCCAAACACTaGTCTGCGGTGATTTGTGGTGAAAAAGAAAGAAGT +
Preference number: 3 (lower is better)
Translates to: PIIQFPTPAPKH*SAVICGEKERS
Trigger: ACTTCTTTCTTTTTCACCACAAATCACCGCAGACCAGTGTTTGGGAGCAGGTGTAGGAAATTGAATTATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCCAAATGCAGCATCCTaGAGGAGTATAGTAGGTCAG +
Preference number: 3 (lower is better)
Translates to: NINFSTLIRWSTKGIISVPNAAS*RSIVGQ
Trigger: CTGACCTACTATACTCCTCAAGGATGCTGCATTTGG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTACTAGCCTGAGTGGTTaGATGGACAGAGTGATTGGG +
Preference number: 3 (lower is better)
Translates to: FIKLKCHSQLRACATLMCTSLSG*MDRVIG
Trigger: CCCAATCACTCTGTCCATCAAACCACTCAGGCTAGT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCCAAATGCAGCATCCTaGAGGAGTATAGTAGGTCAG +
Preference number: 3 (lower is better)
Translates to: FIKLKCHSQLRACATLMCPNAAS*RSIVGQ
Trigger: CTGACCTACTATACTCCTCAAGGATGCTGCATTTGG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGCCAAGAAGACTGTCTaGTGTTTATCTTTCACCAAG +
Preference number: 3 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSAKKTV*CLSFTK
Trigger: CTTGGTGAAAGATAAACACAAGACAGTCTTCTTGGC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCTAAACGAAACTGGCTaGATAGCTACATGCCATATG +
Preference number: 3 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSLNETG*IATCHM
Trigger: CATATGGCATGTAGCTATCAAGCCAGTTTCGTTTAG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGGCGGAAGTGTTCTTTaGTTTACAGTGTTCAAAATG +
Preference number: 3 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSGGSVL*FTVFKM
Trigger: CATTTTGAACACTGTAAACAAAAGAACACTTCCGCC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR GCA 72 bp AGTAAGGCGGCAGTATTAATAGCAGGTAAGGCGCCATaGAGTTATGGAATCTGTAATATTTTTCATTCACTT +
Preference number: 3 (lower is better)
Translates to: SKAAVLIAGKAP*SYGICNIFHSL
Trigger: AAGTGAATGAAAAATATTACAGATTCCATAACTGCATGGCGCCTTACCTGCTATTAATACTGCCGCCTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR CCA 72 bp AGTTTAAGGATCTGGGTGACTGAACGGCACAAAAACTaGGGTTTCTATCTAGTTCTTCAGATAAAAACCATT +
Preference number: 3 (lower is better)
Translates to: SLRIWVTERHKN*GFYLVLQIKTI
Trigger: AATGGTTTTTATCTGAAGAACTAGATAGAAACCCCAGTTTTTGTGCCGTTCAGTCACCCAGATCCTTAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTTTTGCTATAAGGCTTaGACCCTACAGTTTTCACAG +
Preference number: 3 (lower is better)
Translates to: NINFSTLIRWSTKGIISVFCYKA*TLQFSQ
Trigger: CTGTGAAAACTGTAGGGTCAAAGCCTTATAGCAAAA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCATCAACTTTTCAACTTaGATCAGATGGAGCACCAAA +
Preference number: 3 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSINFST*IRWSTK
Trigger: TTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGAT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCCTCAACCCAAAATATaGTTCTCAATAGCTAGTGTA +
Preference number: 3 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSPQPKI*FSIASV
Trigger: TACACTAGCTATTGAGAACAATATTTTGGGTTGAGG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTTAAAGCAGGATTACTaGGAGGTAGTCTGTCATTTA +
Preference number: 3 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSLKQDY*EVVCHL
Trigger: TAAATGACAGACTACCTCCAAGTAATCCTGCTTTAA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCAAAATAATACTGAAATaGAAGTTCAGGAGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSKIILK*KFRSPG
Trigger: CCCAGGACTCCTGAACTTCAATTTCAGTATTATTTT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR TCA 72 bp TTCCATCACACTTTCCCCCGTATGATACTACTACAGTaGTATTCAGGCCGTTTACACCATTTTGTATTAATA +
Preference number: 3 (lower is better)
Translates to: FHHTFPRMILLQ*YSGRLHHFVLI
Trigger: TATTAATACAAAATGGTGTAAACGGCCTGAATATCACTGTAGTAGTATCATACGGGGGAAAGTGTGATGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR CCA 72 bp ATCACTTGTAGTCAATCAGTCCACAAATATACAACATaGGATGAAGCAGTTTACCTTTGCTTTTCAACCCAT +
Preference number: 3 (lower is better)
Translates to: ITCSQSVHKYTT*DEAVYLCFSTH
Trigger: ATGGGTTGAAAAGCAAAGGTAAACTGCTTCATCCCATGTTGTATATTTGTGGACTGATTGACTACAAGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTTTTGCTATAAGGCTTaGACCCTACAGTTTTCACAG +
Preference number: 3 (lower is better)
Translates to: FIKLKCHSQLRACATLMCFCYKA*TLQFSQ
Trigger: CTGTGAAAACTGTAGGGTCAAAGCCTTATAGCAAAA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR CCA 72 bp TATCTAGTAAATAAGAAAAATGAACAGGGGTCCATATaGAAGTATCTGTCTCTGAGAACTCTAATAATGCAC +
Preference number: 3 (lower is better)
Translates to: YLVNKKNEQGSI*KYLSLRTLIMH
Trigger: GTGCATTATTAGAGTTCTCAGAGACAGATACTTCCATATGGACCCCTGTTCATTTTTCTTATTTACTAGATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
3UTR CCA 72 bp AACAAGCTATGTGCCAAATACTATTTGAGTGTACTCTaGAATCTTCTAACTTCAAACTTATCCCTAATCTCA +
Preference number: 3 (lower is better)
Translates to: NKLCAKYYLSVL*NLLTSNLSLIS
Trigger: TGAGATTAGGGATAAGTTTGAAGTTAGAAGATTCCAGAGTACACTCAAATAGTATTTGGCACATAGCTTGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCGCCCATTAGGCGGCTaGAGCGCGGGCGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSRPLGG*SAGGAG
Trigger: GCCAGCGCCGCCCGCGCTTCAGCCGCCTAATGGGCG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCGCTCCCGGGTCTGCTaGACGCGTCCGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSRSRVC*TRPLPL
Trigger: CAGCGGCAGCGGACGCGTGCAGCAGACCCGGGAGCG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCACCGCCAAGCGAGGTaGGGCCGCCCGCGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSHRQAR*GRPRLG
Trigger: CCCAAGACGCGGGCGGCCCCACCTCGCTTGGCGGTG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCGCCCATTAGGCGGCTaGAGCGCGGGCGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCRPLGG*SAGGAG
Trigger: GCCAGCGCCGCCCGCGCTTCAGCCGCCTAATGGGCG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCGCTCCCGGGTCTGCTaGACGCGTCCGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVRSRVC*TRPLPL
Trigger: CAGCGGCAGCGGACGCGTGCAGCAGACCCGGGAGCG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCACCGCCTGCTGCTGCTaGAGCTGCCGCCTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSTACCC*SCRLPP
Trigger: GGGCGGAAGGCGGCAGCTGCAGCAGCAGCAGGCGGT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGGGGGCTGTCTCGGCTaGGGCTGCGGAGGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSGGCLG*GCGGQA
Trigger: AGCTTGGCCTCCGCAGCCCCAGCCGAGACAGCCCCC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCACCGCCAAGCGAGGTaGGGCCGCCCGCGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVHRQAR*GRPRLG
Trigger: CCCAAGACGCGGGCGGCCCCACCTCGCTTGGCGGTG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCGGGCGGCGGAGAGGTaGGGAGCGAGCCTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCRAAER*GASLQR
Trigger: TCGCTGCAGGCTCGCTCCTCACCTCTCCGCCGCCCG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGCTCGCTCCCGGGTCTaGTGCACGCGTCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCARSRV*CTRPLP
Trigger: CGGCAGCGGACGCGTGCAGCAGACCCGGGAGCGAGC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGGCTACTGCCATTGTTaGCGAGACCCCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSGYCHC*RDPRRR
Trigger: GCGGCGGCGGGGGTCTCGGCAACAATGGCAGTAGCC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCACCGCCTGCTGCTGCTaGAGCTGCCGCCTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVTACCC*SCRLPP
Trigger: GGGCGGAAGGCGGCAGCTGCAGCAGCAGCAGGCGGT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGGAGCAGCAACTCCTTaGCTTCCTCGGCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSGAATP*LPRRRR
Trigger: CCGGCGCCGCCGAGGAAGCCAAGGAGTTGCTGCTCC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCACCGCCAAGCGAGGTaGGGCCGCCCGCGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCHRQAR*GRPRLG
Trigger: CCCAAGACGCGGGCGGCCCCACCTCGCTTGGCGGTG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCGAGGCCTTCGAAGTTaGGCAGCGGAGTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSRGLRS*AAECGE
Trigger: CTCCCCGCACTCCGCTGCTCAACTTCGAAGGCCTCG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGGGGAGACCCTCCGCTaGCCCCTCTTTAAAGCCGCG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSGETLR*PLFKAA
Trigger: CGCGGCTTTAAAGAGGGGGCAGCGGAGGGTCTCCCC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGGTGAGGAGCGAGCCTaGAGCGAGCGAGGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSGEERA*SERGLR
Trigger: TCGAAGGCCTCGCTCGCTGCAGGCTCGCTCCTCACC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGGCGGCCGCGGCTACTaGCATTGTTGCCGAGACCCC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVGGRGY*HCCRDP
Trigger: GGGGTCTCGGCAACAATGGCAGTAGCCGCGGCCGCC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCCTCCTCGTCCTCGGTaGTGTCGCTCAGGGACGCGC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVPPRPR*CRSGTR
Trigger: GCGCGTCCCTGAGCGACAGCACCGAGGACGAGGAGG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTACCGCCTGCTGCTGCTaGAGCTGCCGCCTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCTACCC*SCRLPP
Trigger: GGGCGGAAGGCGGCAGCTGCAGCAGCAGCAGGCGGT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGGGCCGCCCGCGTCTTaGGGGAGCAGCAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVGPPAS*GSSNSL
Trigger: CAAGGAGTTGCTGCTCCCCCAAGACGCGGGCGGCCC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCGAGGCCTTCGAAGTTaGGCAGCGGAGTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVRGLRS*AAECGE
Trigger: CTCCCCGCACTCCGCTGCTCAACTTCGAAGGCCTCG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCCGGCCCTCGCCCATTaGAATGCCTCAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSPALAH*NASRAT
Trigger: TGTGGCCCTTGAGGCATTTCAATGGGCGAGGGCCGG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGGGGAGACCCTCCGCTaGCCCCTCTTTAAAGCCGCG +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVGETLR*PLFKAA
Trigger: CGCGGCTTTAAAGAGGGGGCAGCGGAGGGTCTCCCC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGGTGAGGAGCGAGCCTaGAGCGAGCGAGGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVGEERA*SERGLR
Trigger: TCGAAGGCCTCGCTCGCTGCAGGCTCGCTCCTCACC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGGCTACTGCCATTGTTaGCGAGACCCCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCGYCHC*RDPRRR
Trigger: GCGGCGGCGGGGGTCTCGGCAACAATGGCAGTAGCC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGGCGGCCGCGGCTACTaGCATTGTTGCCGAGACCCC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCGGRGY*HCCRDP
Trigger: GGGGTCTCGGCAACAATGGCAGTAGCCGCGGCCGCC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCAGGGACGCGCCGTCCTaGATCAACTCCTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSRDAPS*INSFPS
Trigger: GGAGGGGAAGGAGTTGATGCAGGACGGCGCGTCCCT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCCTCCTCGTCCTCGGTaGTGTCGCTCAGGGACGCGC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCPPRPR*CRSGTR
Trigger: GCGCGTCCCTGAGCGACAGCACCGAGGACGAGGAGG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCGTCCGACCAGGCCCTaGCGGAGGTCGAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSRPTRP*RRSNGK
Trigger: TTTGCCATTCGACCTCCGCCAGGGCCTGGTCGGACG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426744.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGAGGCCTCCAGGTCTTaGGGCTCCAGGCCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSEASRS*GSRPSN
Trigger: ATTGGAGGGCCTGGAGCCCCAAGACCTGGAGGCCTC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGGAGCAGCAACTCCTTaGCTTCCTCGGCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCGAATP*LPRRRR
Trigger: CCGGCGCCGCCGAGGAAGCCAAGGAGTTGCTGCTCC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCAGCCTTGTCATTTGCTaGGGGTGGGTGGCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVSLVIC*GWVAVP
Trigger: GGGCACCGCCACCCACCCTCAGCAAATGACAAGGCT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430430.5
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTGCGGTTCATTTCACTaGACGACATGGCGCGCGCCG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSCGSFH*TTWRAP
Trigger: CGGCGCGCGCCATGTCGTTCAGTGAAATGAACCGCA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCCGGCCCTCGCCCATTaGAATGCCTCAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVPALAH*NASRAT
Trigger: TGTGGCCCTTGAGGCATTTCAATGGGCGAGGGCCGG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGGGGAGACCCTCCGCTaGCCCCTCTTTAAAGCCGCG +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCGETLR*PLFKAA
Trigger: CGCGGCTTTAAAGAGGGGGCAGCGGAGGGTCTCCCC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGGTGAGGAGCGAGCCTaGAGCGAGCGAGGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCGEERA*SERGLR
Trigger: TCGAAGGCCTCGCTCGCTGCAGGCTCGCTCCTCACC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCAGGGACGCGCCGTCCTaGATCAACTCCTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVRDAPS*INSFPS
Trigger: GGAGGGGAAGGAGTTGATGCAGGACGGCGCGTCCCT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCGTCCGACCAGGCCCTaGCGGAGGTCGAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVRPTRP*RRSNGK
Trigger: TTTGCCATTCGACCTCCGCCAGGGCCTGGTCGGACG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426744.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCTCATCATGCCCCACTaGGGGAAGGTCCACGCTTCC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSLIMPH*GKVHAS
Trigger: GGAAGCGTGGACCTTCCCCCAGTGGGGCATGATGAG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCCTCGCCCATTGAAATaGCTCAAGGGCCACACCGAG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSPRPLK*LKGHTE
Trigger: CTCGGTGTGGCCCTTGAGGCATTTCAATGGGCGAGG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGAGGCCTCCAGGTCTTaGGGCTCCAGGCCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCEASRS*GSRPSN
Trigger: ATTGGAGGGCCTGGAGCCCCAAGACCTGGAGGCCTC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTCTGCATTAGAGACTTaGGCCGCGCGAGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSSALET*AARAGS
Trigger: ACTTCCCGCTCGCGCGGCCCAAGTCTCTAATGCAGA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCTCATCATGCCCCACTaGGGGAAGGTCCACGCTTCC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVLIMPH*GKVHAS
Trigger: GGAAGCGTGGACCTTCCCCCAGTGGGGCATGATGAG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTGCTCGGTAGAGACGTaGTGCCTCAGGAGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSCSVET*CLRRRV
Trigger: AACCCTCCTCCTGAGGCACCACGTCTCTACCGAGCA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTGCGGTTCATTTCACTaGACGACATGGCGCGCGCCG +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCCGSFH*TTWRAP
Trigger: CGGCGCGCGCCATGTCGTTCAGTGAAATGAACCGCA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGACTGGACCAGGCGGTaGCTTTCACGCGAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVDWTRR*LSREEV
Trigger: AACCTCTTCGCGTGAAAGGCACCGCCTGGTCCAGTC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430430.5
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCTGTGCGGTGGGAGCTaGGCTCCAGCCTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVLCGGS*APALSF
Trigger: AAATGACAAGGCTGGAGCGCAGCTCCCACCGCACAG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430430.5
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTCGGTAGAGACGTGGTaGCTCAGGAGGAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSSVETW*LRRRVF
Trigger: GAAAACCCTCCTCCTGAGGCACCACGTCTCTACCGA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGCTTCGTGGAGTTTGTaGTCGGTAGAGACGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSASWSL*SVETWC
Trigger: GCACCACGTCTCTACCGAGCACAAACTCCACGAAGC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTCTGCATTAGAGACTTaGGCCGCGCGAGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVSALET*AARAGS
Trigger: ACTTCCCGCTCGCGCGGCCCAAGTCTCTAATGCAGA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCTCATCATGCCCCACTaGGGGAAGGTCCACGCTTCC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCLIMPH*GKVHAS
Trigger: GGAAGCGTGGACCTTCCCCCAGTGGGGCATGATGAG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTGCTCGGTAGAGACGTaGTGCCTCAGGAGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVCSVET*CLRRRV
Trigger: AACCCTCCTCCTGAGGCACCACGTCTCTACCGAGCA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTGGGCGTTGGCTTCGTaGAGTTTGTGCTCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSWALAS*SLCSVE
Trigger: CTCTACCGAGCACAAACTCCACGAAGCCAACGCCCA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCAAGGATCTGGGTGACTaGACGGCACAAAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSKDLGD*TAQKLG
Trigger: CCCCAGTTTTTGTGCCGTTCAGTCACCCAGATCCTT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCAGAGGCACGCTAAACTaGTCGGCTCCGCCACATAAC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVRGTLN*SAPPHN
Trigger: GTTATGTGGCGGAGCCGAGCAGTTTAGCGTGCCTCT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCCTCGCCCATTGAAATaGCTCAAGGGCCACACCGAG +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCPRPLK*LKGHTE
Trigger: CTCGGTGTGGCCCTTGAGGCATTTCAATGGGCGAGG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGAGCATTGGAGCTTCTaGATTAGAGACTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSEHWSF*IRDLGR
Trigger: GCGGCCCAAGTCTCTAATGCAGAAGCTCCAATGCTC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGGGTTTTCTTGTAGTTaGGGGTCCCTCGCGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSGFSCS*GSLAKA
Trigger: AGCTTTCGCGAGGGACCCGCAACTACAAGAAAACCC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTCGGTAGAGACGTGGTaGCTCAGGAGGAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVSVETW*LRRRVF
Trigger: GAAAACCCTCCTCCTGAGGCACCACGTCTCTACCGA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCTGGCGGAGGTCGAATaGCAAATGAACAACGGACCG +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVLAEVE*QMNNGP
Trigger: CGGTCCGTTGTTCATTTGCCATTCGACCTCCGCCAG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426744.5
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTCTGCATTAGAGACTTaGGCCGCGCGAGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCSALET*AARAGS
Trigger: ACTTCCCGCTCGCGCGGCCCAAGTCTCTAATGCAGA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTGCTCGGTAGAGACGTaGTGCCTCAGGAGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCCSVET*CLRRRV
Trigger: AACCCTCCTCCTGAGGCACCACGTCTCTACCGAGCA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTTGCCCTCCTGGCTGTaGTTTATCTGCACAGTCTAC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSLPSWL*FICTVY
Trigger: GTAGACTGTGCAGATAAATCACAGCCAGGAGGGCAA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGCAATAGAGCCTCCCTaGAAGAGTATGGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSAIEPP*KSMGFR
Trigger: TCTGAAGCCCATACTCTTTCAGGGAGGCTCTATTGC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCCCAAAGGCTCAGTGTaGCACCACGTATCATATGCT +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSPKGSV*HHVSYA
Trigger: AGCATATGATACGTGGTGTCACACTGAGCCTTTGGG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTAGAGGCACGCTAAACTaGTCGGCTCCGCCACATAAC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCRGTLN*SAPPHN
Trigger: GTTATGTGGCGGAGCCGAGCAGTTTAGCGTGCCTCT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGAGCATTGGAGCTTCTaGATTAGAGACTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVEHWSF*IRDLGR
Trigger: GCGGCCCAAGTCTCTAATGCAGAAGCTCCAATGCTC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTCGGTAGAGACGTGGTaGCTCAGGAGGAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCSVETW*LRRRVF
Trigger: GAAAACCCTCCTCCTGAGGCACCACGTCTCTACCGA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGCTTCGTGGAGTTTGTaGTCGGTAGAGACGTGGTGC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCASWSL*SVETWC
Trigger: GCACCACGTCTCTACCGAGCACAAACTCCACGAAGC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCAAATAACTGTGCGGTaGGAGCTGCGCTCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCQITVR*ELRSSL
Trigger: AAGGCTGGAGCGCAGCTCCCACCGCACAGTTATTTG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430430.5
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTCTGCAGGGGTCTTTTaGCACCAGCCGCAAGACATA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVSAGVF*HQPQDI
Trigger: TATGTCTTGCGGCTGGTGCCAAAAGACCCCTGCAGA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTGGGCGTTGGCTTCGTaGAGTTTGTGCTCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCWALAS*SLCSVE
Trigger: CTCTACCGAGCACAAACTCCACGAAGCCAACGCCCA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCTGACTCCTGGGCGTTaGCTTCGTGGAGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCLTPGR*LRGVCA
Trigger: AGCACAAACTCCACGAAGCCAACGCCCAGGAGTCAG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGGTATTTCTGACTCCTaGGCGTTGGCTTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVGISDS*ALASWS
Trigger: ACTCCACGAAGCCAACGCCCAGGAGTCAGAAATACC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTTGCCCTCCTGGCTGTaGTTTATCTGCACAGTCTAC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVLPSWL*FICTVY
Trigger: GTAGACTGTGCAGATAAATCACAGCCAGGAGGGCAA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCATACAAACTTCTCCTaGTTCATCCCATCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSHTNFS*FIPSRG
Trigger: CCCTCTCGATGGGATGAATCAGGAGAAGTTTGTATG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGCAATAGAGCCTCCCTaGAAGAGTATGGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVAIEPP*KSMGFR
Trigger: TCTGAAGCCCATACTCTTTCAGGGAGGCTCTATTGC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTAAGGATCTGGGTGACTaGACGGCACAAAAACTGGGG +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCKDLGD*TAQKLG
Trigger: CCCCAGTTTTTGTGCCGTTCAGTCACCCAGATCCTT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGAGCATTGGAGCTTCTaGATTAGAGACTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCEHWSF*IRDLGR
Trigger: GCGGCCCAAGTCTCTAATGCAGAAGCTCCAATGCTC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGGGTTTTCTTGTAGTTaGGGGTCCCTCGCGAAAGCT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCGFSCS*GSLAKA
Trigger: AGCTTTCGCGAGGGACCCGCAACTACAAGAAAACCC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTTCCTTCACAAAGACTaGACCAGGCGGTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVFLHKD*TRRCLS
Trigger: TGAAAGGCACCGCCTGGTCCAGTCTTTGTGAAGGAA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430430.5
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCGCCACGAGTTCACCTaGGACTTTGCAAATAACTGT +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSRHEFT*DFANNC
Trigger: ACAGTTATTTGCAAAGTCCCAGGTGAACTCGTGGCG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430430.5
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTCTGCAGGGGTCTTTTaGCACCAGCCGCAAGACATA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCSAGVF*HQPQDI
Trigger: TATGTCTTGCGGCTGGTGCCAAAAGACCCCTGCAGA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGGTATTTCTGACTCCTaGGCGTTGGCTTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCGISDS*ALASWS
Trigger: ACTCCACGAAGCCAACGCCCAGGAGTCAGAAATACC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCTCCCTGAAAGAGTATaGGCTTCAGAATCAGACGTG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSLPERV*ASESDV
Trigger: CACGTCTGATTCTGAAGCCCATACTCTTTCAGGGAG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGAAGTCCAAGATGACTaGAAAACCTTGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSEVQDD*KTLNCS
Trigger: GCTGCAGTTCAAGGTTTTTCAGTCATCTTGGACTTC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTCACTCCTGTGTGAATaGGCAAGTGCCTTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSSLLCE*ASAFLV
Trigger: CACTAAAAAGGCACTTGCTCATTCACACAGGAGTGA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCACTGGCTGCTAACATaGAGATCTTCTTACACACCA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSHWLLT*RSSYTP
Trigger: TGGTGTGTAAGAAGATCTTCATGTTAGCAGCCAGTG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTTGCCCTCCTGGCTGTaGTTTATCTGCACAGTCTAC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCLPSWL*FICTVY
Trigger: GTAGACTGTGCAGATAAATCACAGCCAGGAGGGCAA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCCCAAAGGCTCAGTGTaGCACCACGTATCATATGCT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCPKGSV*HHVSYA
Trigger: AGCATATGATACGTGGTGTCACACTGAGCCTTTGGG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTCAATTTCCTACACCTaGTCCCAAACACTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVSISYT*SQTLVC
Trigger: GCAGACCAGTGTTTGGGAGCAGGTGTAGGAAATTGA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTCAGGAGATCCATCCTaGACCCAACTACTGTCATTC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVSGDPS*TQLLSF
Trigger: GAATGACAGTAGTTGGGTCCAGGATGGATCTCCTGA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGTCTGGAAGGAGCATTaGAGCTTCTGCATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVVWKEH*SFCIRD
Trigger: GTCTCTAATGCAGAAGCTCCAATGCTCCTTCCAGAC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGAAGTTCAGGAGTCCTaGGTCCTAAAACTGACTGGA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVEVQES*VLKLTG
Trigger: TCCAGTCAGTTTTAGGACCCAGGACTCCTGAACTTC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCGGTGCCCAAGGAAGTaGACTTATTTTGTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVRCPRK*TYFVPS
Trigger: TGAAGGAACAAAATAAGTTCACTTCCTTGGGCACCG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430430.5
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGAAGTCCAAGATGACTaGAAAACCTTGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVEVQDD*KTLNCS
Trigger: GCTGCAGTTCAAGGTTTTTCAGTCATCTTGGACTTC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCATACTTGAAATCATGTaGAGTACCAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSILEIM*STSITS
Trigger: GGAGGTGATGCTGGTACTTCACATGATTTCAAGTAT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCACTGGCTGCTAACATaGAGATCTTCTTACACACCA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVHWLLT*RSSYTP
Trigger: TGGTGTGTAAGAAGATCTTCATGTTAGCAGCCAGTG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCATACAAACTTCTCCTaGTTCATCCCATCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCHTNFS*FIPSRG
Trigger: CCCTCTCGATGGGATGAATCAGGAGAAGTTTGTATG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCACTTCAATGGCATTTTaGCTTGTGAGCACCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSTSMAF*LVSTRL
Trigger: TAACCTGGTGCTCACAAGCCAAAATGCCATTGAAGT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTCAGGAGATCCATCCTaGACCCAACTACTGTCATTC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCSGDPS*TQLLSF
Trigger: GAATGACAGTAGTTGGGTCCAGGATGGATCTCCTGA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGTCTGGAAGGAGCATTaGAGCTTCTGCATTAGAGAC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCVWKEH*SFCIRD
Trigger: GTCTCTAATGCAGAAGCTCCAATGCTCCTTCCAGAC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCACAAGAAGTCCAAGATaGCTGAAAAACCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSTRSPR*LKNLEL
Trigger: CAGTTCAAGGTTTTTCAGTCATCTTGGACTTCTTGT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCATACTTGAAATCATGTaGAGTACCAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVILEIM*STSITS
Trigger: GGAGGTGATGCTGGTACTTCACATGATTTCAAGTAT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTCACTCCTGTGTGAATaGGCAAGTGCCTTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCSLLCE*ASAFLV
Trigger: CACTAAAAAGGCACTTGCTCATTCACACAGGAGTGA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCACTGGCTGCTAACATaGAGATCTTCTTACACACCA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCHWLLT*RSSYTP
Trigger: TGGTGTGTAAGAAGATCTTCATGTTAGCAGCCAGTG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCATGATACTACTACAGTaGTATTCAGGCCGTTTACAC +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSMILLQ*YSGRLH
Trigger: GTGTAAACGGCCTGAATATCACTGTAGTAGTATCAT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGCACAAATCCAACTCTaGAATAGAAATGTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSAQIQL*NRNVWS
Trigger: TGACCAGACATTTCTATTTCAGAGTTGGATTTGTGC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGGCTCCCCTTTATTGTaGCCTTCTCCAAACAAAATC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCGSPLL*PSPNKI
Trigger: GATTTTGTTTGGAGAAGGGCACAATAAAGGGGAGCC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCACTTCAATGGCATTTTaGCTTGTGAGCACCAGGTTA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVTSMAF*LVSTRL
Trigger: TAACCTGGTGCTCACAAGCCAAAATGCCATTGAAGT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTTTAAAAGATCTAGATaGGAAAAGGCAGTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSFKRSR*EKAVPR
Trigger: TCGAGGGACTGCCTTTTCCCATCTAGATCTTTTAAA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTTAAGTTTAAGGATCTaGGTGACTGAACGGCACAAA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSLSLRI*VTERHK
Trigger: TTTGTGCCGTTCAGTCACCCAGATCCTTAAACTTAA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCATTATAATGCTATGTaGGCTCCCCTTTATTGTGCC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVHYNAM*APLYCA
Trigger: GGCACAATAAAGGGGAGCCCACATAGCATTATAATG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCGCTTACCACAATGCTaGCATCACAAAGAATACCTT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCRLPQC*HHKEYL
Trigger: AAGGTATTCTTTGTGATGTCAGCATTGTGGTAAGCG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTGTTCTTATGAGCTTTaGAGATTTTTCCGCTTACCA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSCSYEL*RFFRLP
Trigger: TGGTAAGCGGAAAAATCTTCAAAGCTCATAAGAACA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCATGACTGAAAAACCTTaGACTGCAGCAATATCTAAG +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSMTEKP*TAAISK
Trigger: CTTAGATATTGCTGCAGTTCAAGGTTTTTCAGTCAT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCACAAGAAGTCCAAGATaGCTGAAAAACCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVTRSPR*LKNLEL
Trigger: CAGTTCAAGGTTTTTCAGTCATCTTGGACTTCTTGT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTATACTTGAAATCATGTaGAGTACCAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCILEIM*STSITS
Trigger: GGAGGTGATGCTGGTACTTCACATGATTTCAAGTAT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTCAACTTTTCAACTTTaGTCAGATGGAGCACCAAAG +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVSTFQL*SDGAPK
Trigger: CTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCACACTTTCCCCCGTATaGTACTACTACAGTGATATT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVTLSPV*YYYSDI
Trigger: AATATCACTGTAGTAGTATCATACGGGGGAAAGTGT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGACTCCATTAAGAGCTaGAATTCTACAAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSDSIKS*NSTRVV
Trigger: AACAACTCTTGTAGAATTTCAGCTCTTAATGGAGTC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGCACAAATCCAACTCTaGAATAGAAATGTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVAQIQL*NRNVWS
Trigger: TGACCAGACATTTCTATTTCAGAGTTGGATTTGTGC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTGCGGTGATTTGTGGTaGAAAAGAAAGAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVCGDLW*KRKKFR
Trigger: TCTGAACTTCTTTCTTTTTCACCACAAATCACCGCA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGTGCCAAATACTATTTaGGTGTACTCTGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVVPNTI*VYSGIF
Trigger: GAAGATTCCAGAGTACACTCAAATAGTATTTGGCAC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGGTAAGATTCCGTGTTaGCCAAAAACTGGCAATTTT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVGKIPC*PKTGNF
Trigger: AAAATTGCCAGTTTTTGGGCAACACGGAATCTTACC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGCATGTACCATATTTTaGAAGCCTTCAAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSACTIF*KPSSST
Trigger: TGTTGAACTTGAAGGCTTGCAAAATATGGTACATGC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTACTTCAATGGCATTTTaGCTTGTGAGCACCAGGTTA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCTSMAF*LVSTRL
Trigger: TAACCTGGTGCTCACAAGCCAAAATGCCATTGAAGT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGATGGACAGAGTGATTaGGTCAATTGTCACTGTACT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCDGQSD*VNCHCT
Trigger: AGTACAGTGACAATTGACCCAATCACTCTGTCCATC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCAGTAAGGAAATTTATTaGGGGGAGGAAAGACACTCA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVSKEIY*GEERHS
Trigger: TGAGTGTCTTTCCTCCCCCCAATAAATTTCCTTACT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGAACGGCACAAAAACTaGGGTTTCTATCTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVERHKN*GFYLVL
Trigger: AAGAACTAGATAGAAACCCCAGTTTTTGTGCCGTTC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTTAAGTTTAAGGATCTaGGTGACTGAACGGCACAAA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVLSLRI*VTERHK
Trigger: TTTGTGCCGTTCAGTCACCCAGATCCTTAAACTTAA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCATTATAATGCTATGTaGGCTCCCCTTTATTGTGCC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCHYNAM*APLYCA
Trigger: GGCACAATAAAGGGGAGCCCACATAGCATTATAATG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGCAGTAGGTTGGATTTaGTCATTACATCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVAVGWI*SLHLAV
Trigger: TACTGCAAGATGTAATGACCAAATCCAACCTACTGC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCATGACTGAAAAACCTTaGACTGCAGCAATATCTAAG +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVMTEKP*TAAISK
Trigger: CTTAGATATTGCTGCAGTTCAAGGTTTTTCAGTCAT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTACAAGAAGTCCAAGATaGCTGAAAAACCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCTRSPR*LKNLEL
Trigger: CAGTTCAAGGTTTTTCAGTCATCTTGGACTTCTTGT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTTTTACTTTGATAACTaGCTGAGTATGTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCFYFDN*LSMWGL
Trigger: GAGTCCCCACATACTCAGTCAGTTATCAAAGTAAAA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGACTCCATTAAGAGCTaGAATTCTACAAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVDSIKS*NSTRVV
Trigger: AACAACTCTTGTAGAATTTCAGCTCTTAATGGAGTC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTGCGGTGATTTGTGGTaGAAAAGAAAGAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCCGDLW*KRKKFR
Trigger: TCTGAACTTCTTTCTTTTTCACCACAAATCACCGCA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGTGCCAAATACTATTTaGGTGTACTCTGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCVPNTI*VYSGIF
Trigger: GAAGATTCCAGAGTACACTCAAATAGTATTTGGCAC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGGTAAGATTCCGTGTTaGCCAAAAACTGGCAATTTT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCGKIPC*PKTGNF
Trigger: AAAATTGCCAGTTTTTGGGCAACACGGAATCTTACC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGAAGCAGTTTACCTTTaGTTTTCAACCCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVEAVYL*FSTHFQ
Trigger: TTGGAAATGGGTTGAAAAGCAAAGGTAAACTGCTTC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCACACCACGTATCATATaGTTGGCAACACAAAATAAC +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVTPRII*LATQNN
Trigger: GTTATTTTGTGTTGCCAAGCATATGATACGTGGTGT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCACAAAGGCTACTTTTaGATTGAGATTTCCATAGTA +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSHKGYF*IEISIV
Trigger: TACTATGGAAATCTCAATGCAAAAGTAGCCTTTGTG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTTAAGTTTAAGGATCTaGGTGACTGAACGGCACAAA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCLSLRI*VTERHK
Trigger: TTTGTGCCGTTCAGTCACCCAGATCCTTAAACTTAA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTCAAGTCTGAATATCTaGCCAGTTCTGATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVSSLNI*PVLISF
Trigger: AAAGGAAATCAGAACTGGCCAGATATTCAGACTTGA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCATAACTAAACGAAACTaGCTTGATAGCTACATGCCA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVITKRN*LDSYMP
Trigger: TGGCATGTAGCTATCAAGCCAGTTTCGTTTAGTTAT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGCAGTAGGTTGGATTTaGTCATTACATCTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCAVGWI*SLHLAV
Trigger: TACTGCAAGATGTAATGACCAAATCCAACCTACTGC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCACATTTGCAGTAGGTTaGATTTGGTCATTACATCTT +
Preference number: 4 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSTFAVG*IWSLHL
Trigger: AAGATGTAATGACCAAATCCAACCTACTGCAAATGT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR TCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTGTTCTTATGAGCTTTaGAGATTTTTCCGCTTACCA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCCSYEL*RFFRLP
Trigger: TGGTAAGCGGAAAAATCTTCAAAGCTCATAAGAACA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGAAGCAGTTTACCTTTaGTTTTCAACCCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCEAVYL*FSTHFQ
Trigger: TTGGAAATGGGTTGAAAAGCAAAGGTAAACTGCTTC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGATCAACAAGCTATGTaGCAAATACTATTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVDQQAM*QILFEC
Trigger: ACACTCAAATAGTATTTGGCACATAGCTTGTTGATC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTACACCACGTATCATATaGTTGGCAACACAAAATAAC +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCTPRII*LATQNN
Trigger: GTTATTTTGTGTTGCCAAGCATATGATACGTGGTGT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCACAAAGGCTACTTTTaGATTGAGATTTCCATAGTA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVHKGYF*IEISIV
Trigger: TACTATGGAAATCTCAATGCAAAAGTAGCCTTTGTG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGCAGCAATATCTAAGTaGGTAGTATTGTTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVAAISK*VVLFWL
Trigger: TAACCAAAACAATACTACCCACTTAGATATTGCTGC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTCAAGTCTGAATATCTaGCCAGTTCTGATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCSSLNI*PVLISF
Trigger: AAAGGAAATCAGAACTGGCCAGATATTCAGACTTGA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTATAACTAAACGAAACTaGCTTGATAGCTACATGCCA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCITKRN*LDSYMP
Trigger: TGGCATGTAGCTATCAAGCCAGTTTCGTTTAGTTAT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCACATTTGCAGTAGGTTaGATTTGGTCATTACATCTT +
Preference number: 4 (lower is better)
Translates to: NINFSTLIRWSTKGIISVTFAVG*IWSLHL
Trigger: AAGATGTAATGACCAAATCCAACCTACTGCAAATGT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGATCAACAAGCTATGTaGCAAATACTATTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCDQQAM*QILFEC
Trigger: ACACTCAAATAGTATTTGGCACATAGCTTGTTGATC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR GCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCACAAAGGCTACTTTTaGATTGAGATTTCCATAGTA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCHKGYF*IEISIV
Trigger: TACTATGGAAATCTCAATGCAAAAGTAGCCTTTGTG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CCA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGCAGCAATATCTAAGTaGGTAGTATTGTTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: FIKLKCHSQLRACATLMCAAISK*VVLFWL
Trigger: TAACCAAAACAATACTACCCACTTAGATATTGCTGC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 90 bp GCAGCCCGGCTCGCGCTCGCTCCCGGGTCTGCTGCACGCGTCCGCTaGCGCTGCCGCTGCCGGGCCGACGCCTCCGACCGCTCTCTCGTC +
Preference number: 5 (lower is better)
Translates to: AARLALAPGSAARVR*RCRCRADASDRSLV
Trigger: GACGAGAGAGCGGTCGGAGGCGTCGGCCCGGCAGCGGCAGCGGCAGCGGACGCGTGCAGCAGACCCGGGAGCGAGCGCGAGCCGGGCTGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 90 bp CGGCTCGCGCTCGCTCCCGGGTCTGCTGCACGCGTCCGCTGCCGCTaGCGCTGCCGGGCCGACGCCTCCGACCGCTCTCTCGTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: RLALAPGSAARVRCR*RCRADASDRSLVLH
Trigger: GTGGAGGACGAGAGAGCGGTCGGAGGCGTCGGCCCGGCAGCGGCAGCGGCAGCGGACGCGTGCAGCAGACCCGGGAGCGAGCGCGAGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 90 bp CGCTGCCCTCCACTTCGTCCCCGCCATCGCCGCCCGACCGCCTGCTaGTGCTGCAGCTGCCGCCTTCCGCCCCGCTGCCGTCGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: RCPPLRPRHRRPTAC*CCSCRLPPRCRRPG
Trigger: GCCTGGGCGACGGCAGCGGGGCGGAAGGCGGCAGCTGCAGCAGCAGCAGGCGGTCGGGCGGCGATGGCGGGGACGAAGTGGAGGGCAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
ENST00000610895.2
CDS GCA 90 bp CACCGCTGCCCTCCACTTCGTCCCCGCCATCGCCGCCCGACCGCCTaGTGCTGCTGCAGCTGCCGCCTTCCGCCCCGCTGCCGTCGCCCA +
Preference number: 5 (lower is better)
Translates to: HRCPPLRPRHRRPTA*CCCSCRLPPRCRRP
Trigger: TGGGCGACGGCAGCGGGGCGGAAGGCGGCAGCTGCAGCAGCAGCAGGCGGTCGGGCGGCGATGGCGGGGACGAAGTGGAGGGCAGCGGTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
ENST00000610895.2
CDS TCA 90 bp CCAACCCGCCTCCTCGGAACGCCAGCGTCCTGCGGTTCATTTCACTaGACGACATGGCGCGCGCCGCCGCCGCCGCCGCCCGGTGCCCCG +
Preference number: 5 (lower is better)
Translates to: PTRLLGTPASCGSFH*TTWRAPPPPPPGAP
Trigger: CGGGGCACCGGGCGGCGGCGGCGGCGGCGCGCGCCATGTCGTTCAGTGAAATGAACCGCAGGACGCTGGCGTTCCGAGGAGGCGGGTTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 90 bp AGGGCCACACCGAGGTCTCGGGGCGGCCGCGGCTACTGCCATTGTTaGCGAGACCCCCGCCGCCGCCGCCTCGGAAGGCCAGAGTCCGAC +
Preference number: 5 (lower is better)
Translates to: RATPRSRGGRGYCHC*RDPRRRRLGRPESD
Trigger: GTCGGACTCTGGCCTTCCGAGGCGGCGGCGGCGGGGGTCTCGGCAACAATGGCAGTAGCCGCGGCCGCCCCGAGACCTCGGTGTGGCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 90 bp AATGCCTCAAGGGCCACACCGAGGTCTCGGGGCGGCCGCGGCTACTaGCATTGTTGCCGAGACCCCCGCCGCCGCCGCCTCGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: NASRATPRSRGGRGY*HCCRDPRRRRLGRP
Trigger: TGGCCTTCCGAGGCGGCGGCGGCGGGGGTCTCGGCAACAATGGCAGTAGCCGCGGCCGCCCCGAGACCTCGGTGTGGCCCTTGAGGCATT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 90 bp CCCTCCTCCTCGTCCTCGGTGCTGTCGCTCAGGGACGCGCCGTCCTaGATCAACTCCTTCCCCTCCAGCGCGTCCAGCTCCAGATCCACA +
Preference number: 5 (lower is better)
Translates to: PSSSSSVLSLRDAPS*INSFPSSASSSRST
Trigger: TGTGGATCTGGAGCTGGACGCGCTGGAGGGGAAGGAGTTGATGCAGGACGGCGCGTCCCTGAGCGACAGCACCGAGGACGAGGAGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
ENST00000610895.2
CDS TCA 90 bp CGGAGAGGTGAGGAGCGAGCCTGCAGCGAGCGAGGCCTTCGAAGTTaGGCAGCGGAGTGCGGGGAGACCCTCCGCTGCCCCCTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: RRGEERACSERGLRS*AAECGETLRCPLFK
Trigger: TTTAAAGAGGGGGCAGCGGAGGGTCTCCCCGCACTCCGCTGCTCAACTTCGAAGGCCTCGCTCGCTGCAGGCTCGCTCCTCACCTCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 90 bp CCGCCGCCGGCTTCGCAGGCGCTGAGGGTGAGAGGCACGCTAAACTaGTCGGCTCCGCCACATAACGAAGCGACAATAAAGCCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PPPASQALRVRGTLN*SAPPHNEATIKPAE
Trigger: CTCCGCCGGCTTTATTGTCGCTTCGTTATGTGGCGGAGCCGAGCAGTTTAGCGTGCCTCTCACCCTCAGCGCCTGCGAAGCCGGCGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS CCA 90 bp CCGCGCCCGGGACGCGCATTTTCCTTCTCTCGCCACGAGTTCACCTaGGACTTTGCAAATAACTGTGCGGTGGGAGCTGCGCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PRPGRAFSFSRHEFT*DFANNCAVGAALQP
Trigger: AGGCTGGAGCGCAGCTCCCACCGCACAGTTATTTGCAAAGTCCCAGGTGAACTCGTGGCGAGAGAAGGAAAATGCGCGTCCCGGGCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379091.8
ENST00000430430.5
CDS TCA 90 bp CAAATAACTGTGCGGTGGGAGCTGCGCTCCAGCCTTGTCATTTGCTaGGGGTGGGTGGCGGTGCCCAAGGAAGTGAACTTATTTTGTTCC +
Preference number: 5 (lower is better)
Translates to: QITVRWELRSSLVIC*GWVAVPKEVNLFCS
Trigger: GGAACAAAATAAGTTCACTTCCTTGGGCACCGCCACCCACCCTCAGCAAATGACAAGGCTGGAGCGCAGCTCCCACCGCACAGTTATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379091.8
ENST00000430430.5
CDS CCA 90 bp GGCGGTGCCCAAGGAAGTGAACTTATTTTGTTCCTTCACAAAGACTaGACCAGGCGGTGCCTTTCACGCGAAGAGGTTACGACCACGGAC +
Preference number: 5 (lower is better)
Translates to: GGAQGSELILFLHKD*TRRCLSREEVTTTD
Trigger: GTCCGTGGTCGTAACCTCTTCGCGTGAAAGGCACCGCCTGGTCCAGTCTTTGTGAAGGAACAAAATAAGTTCACTTCCTTGGGCACCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379091.8
ENST00000430430.5
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGGGGCCGCCCGCGTCTaGGGGGAGCAGCAACTCCTT +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSGAARV*GEQQLL
Trigger: AAGGAGTTGCTGCTCCCCCAAGACGCGGGCGGCCCC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCCGCGGCTACTGCCATaGTTGCCGAGACCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSPRLLP*LPRPPP
Trigger: CGGCGGGGGTCTCGGCAACAATGGCAGTAGCCGCGG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTCCCCGCCAGCGTTATaGTTCGTGGAGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSSPPAL*FVEPPP
Trigger: CGGCGGCGGCTCCACGAACAATAACGCTGGCGGGGA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGGGAGCAGCAACTCCTaGGCTTCCTCGGCGGCGCCG +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVGSSNS*ASSAAP
Trigger: CGGCGCCGCCGAGGAAGCCAAGGAGTTGCTGCTCCC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGGGGCCGCCCGCGTCTaGGGGGAGCAGCAACTCCTT +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVGAARV*GEQQLL
Trigger: AAGGAGTTGCTGCTCCCCCAAGACGCGGGCGGCCCC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCGGCTACTGCCATTGTaGCCGAGACCCCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVRLLPL*PRPPPP
Trigger: CGGCGGCGGGGGTCTCGGCAACAATGGCAGTAGCCG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCCGCGGCTACTGCCATaGTTGCCGAGACCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVPRLLP*LPRPPP
Trigger: CGGCGGGGGTCTCGGCAACAATGGCAGTAGCCGCGG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 90 bp GGAAGTGAACTTATTTTGTTCCTTCACAAAGACTGGACCAGGCGGTaGCTTTCACGCGAAGAGGTTACGACCACGGACACAACCTCCTTT +
Preference number: 5 (lower is better)
Translates to: GSELILFLHKDWTRR*LSREEVTTTDTTSF
Trigger: AAAGGAGGTTGTGTCCGTGGTCGTAACCTCTTCGCGTGAAAGGCACCGCCTGGTCCAGTCTTTGTGAAGGAACAAAATAAGTTCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379091.8
ENST00000430430.5
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTCCCCGCCAGCGTTATaGTTCGTGGAGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVSPPAL*FVEPPP
Trigger: CGGCGGCGGCTCCACGAACAATAACGCTGGCGGGGA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGGGAGCAGCAACTCCTaGGCTTCCTCGGCGGCGCCG +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCGSSNS*ASSAAP
Trigger: CGGCGCCGCCGAGGAAGCCAAGGAGTTGCTGCTCCC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGGGGCCGCCCGCGTCTaGGGGGAGCAGCAACTCCTT +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCGAARV*GEQQLL
Trigger: AAGGAGTTGCTGCTCCCCCAAGACGCGGGCGGCCCC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCGGCTACTGCCATTGTaGCCGAGACCCCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCRLLPL*PRPPPP
Trigger: CGGCGGCGGGGGTCTCGGCAACAATGGCAGTAGCCG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGCCGGCCCTCGCCCATaGAAATGCCTCAAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSAGPRP*KCLKGH
Trigger: GTGGCCCTTGAGGCATTTCAATGGGCGAGGGCCGGC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGCGAGGCCTTCGAAGTaGAGCAGCGGAGTGCGGGGA +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVARPSK*SSGVRG
Trigger: TCCCCGCACTCCGCTGCTCAACTTCGAAGGCCTCGC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGCCGGCCCTCGCCCATaGAAATGCCTCAAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVAGPRP*KCLKGH
Trigger: GTGGCCCTTGAGGCATTTCAATGGGCGAGGGCCGGC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCCTCCAGCCTTGTCATTaGCTGAGGGTGGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSLQPCH*LRVGGG
Trigger: ACCGCCACCCACCCTCAGCAAATGACAAGGCTGGAG...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430430.5
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCAGCTGCGCTCCAGCCTaGTCATTTGCTGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSSCAPA*SFAEGG
Trigger: CCCACCCTCAGCAAATGACAAGGCTGGAGCGCAGCT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430430.5
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGCGAGGCCTTCGAAGTaGAGCAGCGGAGTGCGGGGA +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCARPSK*SSGVRG
Trigger: TCCCCGCACTCCGCTGCTCAACTTCGAAGGCCTCGC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGCCGGCCCTCGCCCATaGAAATGCCTCAAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCAGPRP*KCLKGH
Trigger: GTGGCCCTTGAGGCATTTCAATGGGCGAGGGCCGGC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCAGCCAGGGAAAGTCCTaGAGCCAGGAGGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSSQGKS*SQEVWK
Trigger: CTTCCAGACCTCCTGGCTCAAGGACTTTCCCTGGCT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTTCTGCATTAGAGACTaGGGCCGCGCGAGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCFCIRD*GRASGK
Trigger: CTTCCCGCTCGCGCGGCCCAAGTCTCTAATGCAGAA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCATCTGCAGGGGTCTTTaGGCACCAGCCGCAAGACAT +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSICRGL*APAARH
Trigger: ATGTCTTGCGGCTGGTGCCAAAAGACCCCTGCAGAT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTTGGCTTCGTGGAGTTaGTGCTCGGTAGAGACGTGG +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSLASWS*CSVETW
Trigger: CCACGTCTCTACCGAGCACAAACTCCACGAAGCCAA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTCTGACTCCTGGGCGTaGGCTTCGTGGAGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVSDSWA*ASWSLC
Trigger: GCACAAACTCCACGAAGCCAACGCCCAGGAGTCAGA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTAGCCAGGGAAAGTCCTaGAGCCAGGAGGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCSQGKS*SQEVWK
Trigger: CTTCCAGACCTCCTGGCTCAAGGACTTTCCCTGGCT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCATCTGCAGGGGTCTTTaGGCACCAGCCGCAAGACAT +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVICRGL*APAARH
Trigger: ATGTCTTGCGGCTGGTGCCAAAAGACCCCTGCAGAT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTTGGCTTCGTGGAGTTaGTGCTCGGTAGAGACGTGG +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVLASWS*CSVETW
Trigger: CCACGTCTCTACCGAGCACAAACTCCACGAAGCCAA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTCTGACTCCTGGGCGTaGGCTTCGTGGAGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCSDSWA*ASWSLC
Trigger: GCACAAACTCCACGAAGCCAACGCCCAGGAGTCAGA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGTGGGCTCCCCTTTATaGTGCCCTTCTCCAAACAAA +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVVGSPL*CPSPNK
Trigger: TTTGTTTGGAGAAGGGCACAATAAAGGGGAGCCCAC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCAACAACTTCACTCATTaGAAGATAGCTGGCCACGGT +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSNNFTH*KIAGHG
Trigger: ACCGTGGCCAGCTATCTTCAAATGAGTGAAGTTGTT...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGTGGGCTCCCCTTTATaGTGCCCTTCTCCAAACAAA +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCVGSPL*CPSPNK
Trigger: TTTGTTTGGAGAAGGGCACAATAAAGGGGAGCCCAC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCTGCAGTAGGTTGGATTaGGTCATTACATCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSCSRLD*VITSCS
Trigger: ACTGCAAGATGTAATGACCAAATCCAACCTACTGCA...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTAACAACTTCACTCATTaGAAGATAGCTGGCCACGGT +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCNNFTH*KIAGHG
Trigger: ACCGTGGCCAGCTATCTTCAAATGAGTGAAGTTGTT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGCCAAGAAGACTGTCTaGTGTTTATCTTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVAKKTV*CLSFTK
Trigger: CTTGGTGAAAGATAAACACAAGACAGTCTTCTTGGC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTGCAGTAGGTTGGATTaGGTCATTACATCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVCSRLD*VITSCS
Trigger: ACTGCAAGATGTAATGACCAAATCCAACCTACTGCA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTACATCTTGCAGTAACATTATCTACTAGGGTTATGTATCCAGGGAAAGGATCCGAAATTTCGGCAAGTTaGAACAACTTCACTCATTTG +
Preference number: 5 (lower is better)
Translates to: LHLAVTLSTRVMYPGKGSEISAS*NNFTHL
Trigger: CAAATGAGTGAAGTTGTTCAAACTTGCCGAAATTTC...GGATCCTTTCCCTGGATACATAACCCTAGTAGATAATGTTACTGCAAGATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGGCGGAAGTGTTCTTTaGTTTACAGTGTTCAAAATG +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVGGSVL*FTVFKM
Trigger: CATTTTGAACACTGTAAACAAAAGAACACTTCCGCC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTGCCAAGAAGACTGTCTaGTGTTTATCTTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCAKKTV*CLSFTK
Trigger: CTTGGTGAAAGATAAACACAAGACAGTCTTCTTGGC...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCGCAAAATCCTTAAAGTaGCTAGTGCCTTTTGTCACT +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVAKSLK*LVPFVT
Trigger: AGTGACAAAAGGCACTAGCAACTTTAAGGATTTTGC...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCTAAACGAAACTGGCTaGATAGCTACATGCCATATG +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCLNETG*IATCHM
Trigger: CATATGGCATGTAGCTATCAAGCCAGTTTCGTTTAG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCATCAACTTTTCAACTTaGATCAGATGGAGCACCAAA +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVINFST*IRWSTK
Trigger: TTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGAT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCCCTCAACCCAAAATATaGTTCTCAATAGCTAGTGTA +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVPQPKI*FSIASV
Trigger: TACACTAGCTATTGAGAACAATATTTTGGGTTGAGG...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCTTAAAGCAGGATTACTaGGAGGTAGTCTGTCATTTA +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVLKQDY*EVVCHL
Trigger: TAAATGACAGACTACCTCCAAGTAATCCTGCTTTAA...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCAAAATAATACTGAAATaGAAGTTCAGGAGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVKIILK*KFRSPG
Trigger: CCCAGGACTCCTGAACTTCAATTTCAGTATTATTTT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp AACATCAACTTTTCAACTTTGATCAGATGGAGCACCAAAGGGATTATATCTGTCAACATTTGCAGTAGGTaGGATTTGGTCATTACATCT +
Preference number: 5 (lower is better)
Translates to: NINFSTLIRWSTKGIISVNICSR*DLVITS
Trigger: AGATGTAATGACCAAATCCAACCTACTGCAAATGTT...GACAGATATAATCCCTTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTATCAACTTTTCAACTTaGATCAGATGGAGCACCAAA +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCINFST*IRWSTK
Trigger: TTTGGTGCTCCATCTGATCAAAGTTGAAAAGTTGAT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTCCTCAACCCAAAATATaGTTCTCAATAGCTAGTGTA +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCPQPKI*FSIASV
Trigger: TACACTAGCTATTGAGAACAATATTTTGGGTTGAGG...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTTTAAAGCAGGATTACTaGGAGGTAGTCTGTCATTTA +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCLKQDY*EVVCHL
Trigger: TAAATGACAGACTACCTCCAAGTAATCCTGCTTTAA...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTAAAATAATACTGAAATaGAAGTTCAGGAGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCKIILK*KFRSPG
Trigger: CCCAGGACTCCTGAACTTCAATTTCAGTATTATTTT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS-3UTR CAA 90 bp TTTATAAAATTAAAATGCCACAGCCAGTTAAGAGCATGTGCTACACTGATGTGTAACATTTGCAGTAGGTaGGATTTGGTCATTACATCT +
Preference number: 5 (lower is better)
Translates to: FIKLKCHSQLRACATLMCNICSR*DLVITS
Trigger: AGATGTAATGACCAAATCCAACCTACTGCAAATGTT...ACACATCAGTGTAGCACATGCTCTTAACTGGCTGTGGCATTTTAATTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 72 bp CGTCCCCGCCATCGCCGCCCGACCGCCTGCTGCTGCTaGAGCTGCCGCCTTCCGCCCCGCTGCCGTCGCCCA +
Preference number: 6 (lower is better)
Translates to: RPRHRRPTACCC*SCRLPPRCRRP
Trigger: TGGGCGACGGCAGCGGGGCGGAAGGCGGCAGCTGCAGCAGCAGCAGGCGGTCGGGCGGCGATGGCGGGGACG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
ENST00000610895.2
CDS GCA 72 bp CTCGCTCCCGGGTCTGCTGCACGCGTCCGCTGCCGCTaGCGCTGCCGGGCCGACGCCTCCGACCGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: LAPGSAARVRCR*RCRADASDRSL
Trigger: GAGAGAGCGGTCGGAGGCGTCGGCCCGGCAGCGGCAGCGGCAGCGGACGCGTGCAGCAGACCCGGGAGCGAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 72 bp CCGAGGTCTCGGGGCGGCCGCGGCTACTGCCATTGTTaGCGAGACCCCCGCCGCCGCCGCCTCGGAAGGCCA +
Preference number: 6 (lower is better)
Translates to: PRSRGGRGYCHC*RDPRRRRLGRP
Trigger: TGGCCTTCCGAGGCGGCGGCGGCGGGGGTCTCGGCAACAATGGCAGTAGCCGCGGCCGCCCCGAGACCTCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 72 bp AGGGCCACACCGAGGTCTCGGGGCGGCCGCGGCTACTaGCATTGTTGCCGAGACCCCCGCCGCCGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: RATPRSRGGRGY*HCCRDPRRRRL
Trigger: GAGGCGGCGGCGGCGGGGGTCTCGGCAACAATGGCAGTAGCCGCGGCCGCCCCGAGACCTCGGTGTGGCCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 72 bp CCACTTCGTCCCCGCCATCGCCGCCCGACCGCCTGCTaGTGCTGCAGCTGCCGCCTTCCGCCCCGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: PLRPRHRRPTAC*CCSCRLPPRCR
Trigger: ACGGCAGCGGGGCGGAAGGCGGCAGCTGCAGCAGCAGCAGGCGGTCGGGCGGCGATGGCGGGGACGAAGTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
ENST00000610895.2
CDS GCA 72 bp CCTCCACTTCGTCCCCGCCATCGCCGCCCGACCGCCTaGTGCTGCTGCAGCTGCCGCCTTCCGCCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: PPLRPRHRRPTA*CCCSCRLPPRC
Trigger: GCAGCGGGGCGGAAGGCGGCAGCTGCAGCAGCAGCAGGCGGTCGGGCGGCGATGGCGGGGACGAAGTGGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
ENST00000610895.2
CDS CAA 72 bp ACCGAGGTCTCGGGGCGGCCGCGGCTACTGCCATTGTaGCCGAGACCCCCGCCGCCGCCGCCTCGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: TEVSGRPRLLPL*PRPPPPPPRKA
Trigger: GGCCTTCCGAGGCGGCGGCGGCGGGGGTCTCGGCAACAATGGCAGTAGCCGCGGCCGCCCCGAGACCTCGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS CCA 72 bp GCGCCACCGCCAAGCGAGGTGGGGCCGCCCGCGTCTTaGGGGAGCAGCAACTCCTTGGCTTCCTCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: APPPSEVGPPAS*GSSNSLASSAA
Trigger: CGCCGCCGAGGAAGCCAAGGAGTTGCTGCTCCCCCAAGACGCGGGCGGCCCCACCTCGCTTGGCGGTGGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS CAA 72 bp CGCGCCACCGCCAAGCGAGGTGGGGCCGCCCGCGTCTaGGGGGAGCAGCAACTCCTTGGCTTCCTCGGCGGC +
Preference number: 6 (lower is better)
Translates to: RATAKRGGAARV*GEQQLLGFLGG
Trigger: GCCGCCGAGGAAGCCAAGGAGTTGCTGCTCCCCCAAGACGCGGGCGGCCCCACCTCGCTTGGCGGTGGCGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS CAA 90 bp AAGGGCCACACCGAGGTCTCGGGGCGGCCGCGGCTACTGCCATTGTaGCCGAGACCCCCGCCGCCGCCGCCTCGGAAGGCCAGAGTCCGA +
Preference number: 6 (lower is better)
Translates to: KGHTEVSGRPRLLPL*PRPPPPPPRKARVR
Trigger: TCGGACTCTGGCCTTCCGAGGCGGCGGCGGCGGGGGTCTCGGCAACAATGGCAGTAGCCGCGGCCGCCCCGAGACCTCGGTGTGGCCCTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS CAA 90 bp CTCAAGGGCCACACCGAGGTCTCGGGGCGGCCGCGGCTACTGCCATaGTTGCCGAGACCCCCGCCGCCGCCGCCTCGGAAGGCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: LKGHTEVSGRPRLLP*LPRPPPPPPRKARV
Trigger: GACTCTGGCCTTCCGAGGCGGCGGCGGCGGGGGTCTCGGCAACAATGGCAGTAGCCGCGGCCGCCCCGAGACCTCGGTGTGGCCCTTGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS TCA 72 bp CTCCTCGGAACGCCAGCGTCCTGCGGTTCATTTCACTaGACGACATGGCGCGCGCCGCCGCCGCCGCCGCCC +
Preference number: 6 (lower is better)
Translates to: LLGTPASCGSFH*TTWRAPPPPPP
Trigger: GGGCGGCGGCGGCGGCGGCGCGCGCCATGTCGTTCAGTGAAATGAACCGCAGGACGCTGGCGTTCCGAGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS CAA 90 bp GGCTGGGGCTGCGGAGGCCAAGCTGAGGCCTCCCCGCCAGCGTTATaGTTCGTGGAGCCGCCGCCGCTAGCGGTGACCAACCCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: GWGCGGQAEASPPAL*FVEPPPLAVTNPPP
Trigger: AGGAGGCGGGTTGGTCACCGCTAGCGGCGGCGGCTCCACGAACAATAACGCTGGCGGGGAGGCCTCAGCTTGGCCTCCGCAGCCCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS TCA 72 bp GAGGAGCGAGCCTGCAGCGAGCGAGGCCTTCGAAGTTaGGCAGCGGAGTGCGGGGAGACCCTCCGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: EERACSERGLRS*AAECGETLRCP
Trigger: GGGGCAGCGGAGGGTCTCCCCGCACTCCGCTGCTCAACTTCGAAGGCCTCGCTCGCTGCAGGCTCGCTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS GCA 72 bp TCCAGATCCACAGTCGCCGGCCCTCGCCCATTGAAATaGCTCAAGGGCCACACCGAGGTCTCGGGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: SRSTVAGPRPLK*LKGHTEVSGRP
Trigger: CGGCCGCCCCGAGACCTCGGTGTGGCCCTTGAGGCATTTCAATGGGCGAGGGCCGGCGACTGTGGATCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS CAA 72 bp TGCGGAGGCCAAGCTGAGGCCTCCCCGCCAGCGTTATaGTTCGTGGAGCCGCCGCCGCTAGCGGTGACCAAC +
Preference number: 6 (lower is better)
Translates to: CGGQAEASPPAL*FVEPPPLAVTN
Trigger: GTTGGTCACCGCTAGCGGCGGCGGCTCCACGAACAATAACGCTGGCGGGGAGGCCTCAGCTTGGCCTCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS CAA 72 bp CACGCGAAGAGGTTACGACCACGGACACAACCTCCTTaGATGCATTGTGCGAGGCAGCACCTCGGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: HAKRLRPRTQPP*MHCARQHLGPR
Trigger: CCGGGGCCCGAGGTGCTGCCTCGCACAATGCATCAAAGGAGGTTGTGTCCGTGGTCGTAACCTCTTCGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379091.8
CDS TCA 72 bp ACGCGAAGAGGTTACGACCACGGACACAACCTCCTTTaGTGCATTGTGCGAGGCAGCACCTCGGGCCCCGGA +
Preference number: 6 (lower is better)
Translates to: TRRGYDHGHNLL*CIVRGSTSGPG
Trigger: TCCGGGGCCCGAGGTGCTGCCTCGCACAATGCATCAAAGGAGGTTGTGTCCGTGGTCGTAACCTCTTCGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379091.8
CDS TCA 72 bp GTGCGGTGGGAGCTGCGCTCCAGCCTTGTCATTTGCTaGGGGTGGGTGGCGGTGCCCAAGGAAGTGAACTTA +
Preference number: 6 (lower is better)
Translates to: VRWELRSSLVIC*GWVAVPKEVNL
Trigger: TAAGTTCACTTCCTTGGGCACCGCCACCCACCCTCAGCAAATGACAAGGCTGGAGCGCAGCTCCCACCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379091.8
ENST00000430430.5
CDS CAA 90 bp GGTGCCTTTCACGCGAAGAGGTTACGACCACGGACACAACCTCCTTaGATGCATTGTGCGAGGCAGCACCTCGGGCCCCGGACAGTAGTC +
Preference number: 6 (lower is better)
Translates to: GAFHAKRLRPRTQPP*MHCARQHLGPRTVV
Trigger: GACTACTGTCCGGGGCCCGAGGTGCTGCCTCGCACAATGCATCAAAGGAGGTTGTGTCCGTGGTCGTAACCTCTTCGCGTGAAAGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379091.8
CDS CAA 72 bp GAGGTTACGACCACGGACACAACCTCCTTTGATGCATaGTGCGAGGCAGCACCTCGGGCCCCGGACAGTAGT +
Preference number: 6 (lower is better)
Translates to: EVTTTDTTSFDA*CEAAPRAPDSS
Trigger: ACTACTGTCCGGGGCCCGAGGTGCTGCCTCGCACAATGCATCAAAGGAGGTTGTGTCCGTGGTCGTAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379091.8
CDS GCA 72 bp GTTACGACCACGGACACAACCTCCTTTGATGCATTGTaGGAGGCAGCACCTCGGGCCCCGGACAGTAGTCAT +
Preference number: 6 (lower is better)
Translates to: VTTTDTTSFDAL*EAAPRAPDSSH
Trigger: ATGACTACTGTCCGGGGCCCGAGGTGCTGCCTCGCACAATGCATCAAAGGAGGTTGTGTCCGTGGTCGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379091.8
CDS GCA 72 bp GCTTCGCAGGCGCTGAGGGTGAGAGGCACGCTAAACTaGTCGGCTCCGCCACATAACGAAGCGACAATAAAG +
Preference number: 6 (lower is better)
Translates to: ASQALRVRGTLN*SAPPHNEATIK
Trigger: CTTTATTGTCGCTTCGTTATGTGGCGGAGCCGAGCAGTTTAGCGTGCCTCTCACCCTCAGCGCCTGCGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
CDS CAA 72 bp GGTATTTCTGACTCCTGGGCGTTGGCTTCGTGGAGTTaGTGCTCGGTAGAGACGTGGTGCCTCAGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: GISDSWALASWS*CSVETWCLRRR
Trigger: CCTCCTCCTGAGGCACCACGTCTCTACCGAGCACAAACTCCACGAAGCCAACGCCCAGGAGTCAGAAATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
ENST00000610895.2
CDS CAA 90 bp CGGGACGCGCATTTTCCTTCTCTCGCCACGAGTTCACCTGGGACTTaGCAAATAACTGTGCGGTGGGAGCTGCGCTCCAGCCTTGTCATT +
Preference number: 6 (lower is better)
Translates to: RDAHFPSLATSSPGT*QITVRWELRSSLVI
Trigger: AATGACAAGGCTGGAGCGCAGCTCCCACCGCACAGTTATTTGCAAAGTCCCAGGTGAACTCGTGGCGAGAGAAGGAAAATGCGCGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379091.8
ENST00000430430.5
CDS GCA 72 bp ATTTCTGACTCCTGGGCGTTGGCTTCGTGGAGTTTGTaGTCGGTAGAGACGTGGTGCCTCAGGAGGAGGGTT +
Preference number: 6 (lower is better)
Translates to: ISDSWALASWSL*SVETWCLRRRV
Trigger: AACCCTCCTCCTGAGGCACCACGTCTCTACCGAGCACAAACTCCACGAAGCCAACGCCCAGGAGTCAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426744.5
ENST00000430430.5
ENST00000455036.8
ENST00000610895.2
CDS CCA 72 bp GGACGCGCATTTTCCTTCTCTCGCCACGAGTTCACCTaGGACTTTGCAAATAACTGTGCGGTGGGAGCTGCG +
Preference number: 6 (lower is better)
Translates to: GRAFSFSRHEFT*DFANNCAVGAA
Trigger: CGCAGCTCCCACCGCACAGTTATTTGCAAAGTCCCAGGTGAACTCGTGGCGAGAGAAGGAAAATGCGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379091.8
ENST00000430430.5
CDS CAA 72 bp CATTTTCCTTCTCTCGCCACGAGTTCACCTGGGACTTaGCAAATAACTGTGCGGTGGGAGCTGCGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: HFPSLATSSPGT*QITVRWELRSS
Trigger: GCTGGAGCGCAGCTCCCACCGCACAGTTATTTGCAAAGTCCCAGGTGAACTCGTGGCGAGAGAAGGAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379091.8
ENST00000430430.5
CDS CAA 90 bp CATTTGCTGAGGGTGGGTGGCGGTGCCCAAGGAAGTGAACTTATTTaGTTCCTTCACAAAGACTGGACCAGGCGGTGCCTTTCACGCGAA +
Preference number: 6 (lower is better)
Translates to: HLLRVGGGAQGSELI*FLHKDWTRRCLSRE
Trigger: TTCGCGTGAAAGGCACCGCCTGGTCCAGTCTTTGTGAAGGAACAAAATAAGTTCACTTCCTTGGGCACCGCCACCCACCCTCAGCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379091.8
ENST00000430430.5
CDS GCA 72 bp CTTATTTTGTTCCTTCACAAAGACTGGACCAGGCGGTaGCTTTCACGCGAAGAGGTTACGACCACGGACACA +
Preference number: 6 (lower is better)
Translates to: LILFLHKDWTRR*LSREEVTTTDT
Trigger: TGTGTCCGTGGTCGTAACCTCTTCGCGTGAAAGGCACCGCCTGGTCCAGTCTTTGTGAAGGAACAAAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379091.8
ENST00000430430.5
CDS CCA 72 bp CAAGGAAGTGAACTTATTTTGTTCCTTCACAAAGACTaGACCAGGCGGTGCCTTTCACGCGAAGAGGTTACG +
Preference number: 6 (lower is better)
Translates to: QGSELILFLHKD*TRRCLSREEVT
Trigger: CGTAACCTCTTCGCGTGAAAGGCACCGCCTGGTCCAGTCTTTGTGAAGGAACAAAATAAGTTCACTTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379091.8
ENST00000430430.5