Pregenerated sensors for YTHDF3-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000270673Ensembl transcript IDs: ENST00000603538.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTGCCTCCGTCCCGTCAGCCTCCAGGAGGGCGCCGCCGGCCGCCGTaGCTTCAGCAAGGCACTACTATCTCCGTCAGCCGCCGCCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: LPPSRQPPGGRRRPP*LQQGTTISVSRRLG Trigger: GCCGAGGCGGCGGCTGACGGAGATAGTAGTGCCTTGCTGAAGTCACGGCGGCCGGCGGCGCCCTCCTGGAGGCTGACGGGACGGAGGCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS CCA 90 bp | CCCCACGGCTTTGGGCAGCCGCCGAAGGCTCCTGCTAGGCCCGGCTaGCTCACCGGGAAGTTCCCTGCCTCCGTCCCGTCAGCCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PHGFGQPPKAPARPG*LTGKFPASVPSASR Trigger: CCTGGAGGCTGACGGGACGGAGGCAGGGAACTTCCCGGTGAGCCAGCCGGGCCTAGCAGGAGCCTTCGGCGGCTGCCCAAAGCCGTGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS TCA 90 bp | ACGGGCAGGCTTGTGGGGACCCAGCAACTCCGTCCAGAGAGCGGCTaGGTCAGCCAGCCGTCCCCACGGCTTTGGGCAGCCGCCGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: TGRLVGTQQLRPESG*VSQPSPRLWAAAEG Trigger: GCCTTCGGCGGCTGCCCAAAGCCGTGGGGACGGCTGGCTGACTCAGCCGCTCTCTGGACGGAGTTGCTGGGTCCCCACAAGCCTGCCCGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS CCA 90 bp | CCGCCTCGGCCATCTTCCTGCCCGGAGTGCAACAAAATCCGGCTCTaGCCAGCCTTCCAGCTGACGCCACTCTGCCAGGGCCCTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: PPRPSSCPECNKIRL*PAFQLTPLCQGPAA Trigger: GGCTGCAGGGCCCTGGCAGAGTGGCGTCAGCTGGAAGGCTGGCCAGAGCCGGATTTTGTTGCACTCCGGGCAGGAAGATGGCCGAGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS TCA 90 bp | CCTGCCCGGAGTGCAACAAAATCCGGCTCTGGCCAGCCTTCCAGCTaGCGCCACTCTGCCAGGGCCCTGCAGCCTCGGAGCGGGATAGAA | + |
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Preference number: 5 (lower is better) Translates to: PARSATKSGSGQPSS*RHSARALQPRSGIE Trigger: TTCTATCCCGCTCCGAGGCTGCAGGGCCCTGGCAGAGTGGCGTCAGCTGGAAGGCTGGCCAGAGCCGGATTTTGTTGCACTCCGGGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS GCA 90 bp | TGCAACAAAATCCGGCTCTGGCCAGCCTTCCAGCTGACGCCACTCTaGCAGGGCCCTGCAGCCTCGGAGCGGGATAGAAGGAAGCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: CNKIRLWPAFQLTPL*QGPAASERDRRKPQ Trigger: CTGCGGCTTCCTTCTATCCCGCTCCGAGGCTGCAGGGCCCTGGCAGAGTGGCGTCAGCTGGAAGGCTGGCCAGAGCCGGATTTTGTTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS GCA 90 bp | TACTATCTCCGTCAGCCGCCGCCTCGGCCATCTTCCTGCCCGGAGTaGAACAAAATCCGGCTCTGGCCAGCCTTCCAGCTGACGCCACTC | + |
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Preference number: 5 (lower is better) Translates to: YYLRQPPPRPSSCPE*NKIRLWPAFQLTPL Trigger: GAGTGGCGTCAGCTGGAAGGCTGGCCAGAGCCGGATTTTGTTGCACTCCGGGCAGGAAGATGGCCGAGGCGGCGGCTGACGGAGATAGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS GCA 90 bp | GCAAGGCACTACTATCTCCGTCAGCCGCCGCCTCGGCCATCTTCCTaGCCGGAGTGCAACAAAATCCGGCTCTGGCCAGCCTTCCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: ARHYYLRQPPPRPSS*PECNKIRLWPAFQL Trigger: CAGCTGGAAGGCTGGCCAGAGCCGGATTTTGTTGCACTCCGGGCAGGAAGATGGCCGAGGCGGCGGCTGACGGAGATAGTAGTGCCTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS TCA 90 bp | AAATCCATGAATTGGGCGGCGAAGTCTGACTCCAGAGATTACGGCTaGACTGGGTTTGGAAAGACTGAACCCGCGCCGGTGCTCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: KSMNWAAKSDSRDYG*TGFGKTEPAPVLLL Trigger: CAGGAGGAGCACCGGCGCGGGTTCAGTCTTTCCAAACCCAGTTCAGCCGTAATCTCTGGAGTCAGACTTCGCCGCCCAATTCATGGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS GCA 90 bp | TTGGACTTAAGTTTGAGTACCACAACTCTAACCTGCCACTTCAGCTaGACGGGCAGGCTTGTGGGGACCCAGCAACTCCGTCCAGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: LDLSLSTTTLTCHFS*TGRLVGTQQLRPES Trigger: GCTCTCTGGACGGAGTTGCTGGGTCCCCACAAGCCTGCCCGTGCAGCTGAAGTGGCAGGTTAGAGTTGTGGTACTCAAACTTAAGTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS TCA 90 bp | TTATTCATTCAAAAACATCAGAGCGGAGTCAAAAGCACAAATCCATaGATTGGGCGGCGAAGTCTGACTCCAGAGATTACGGCTGAACTG | + |
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Preference number: 5 (lower is better) Translates to: LFIQKHQSGVKSTNP*IGRRSLTPEITAEL Trigger: CAGTTCAGCCGTAATCTCTGGAGTCAGACTTCGCCGCCCAATTCATGGATTTGTGCTTTTGACTCCGCTCTGATGTTTTTGAATGAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS CAA 90 bp | ACTCCGTCCAGAGAGCGGCTGAGTCAGCCAGCCGTCCCCACGGCTTaGGGCAGCCGCCGAAGGCTCCTGCTAGGCCCGGCTGGCTCACCG | + |
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Preference number: 6 (lower is better) Translates to: TPSRERLSQPAVPTA*GSRRRLLLGPAGSP Trigger: CGGTGAGCCAGCCGGGCCTAGCAGGAGCCTTCGGCGGCTGCCCAAAGCCGTGGGGACGGCTGGCTGACTCAGCCGCTCTCTGGACGGAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS CAA 72 bp | AGAGAGCGGCTGAGTCAGCCAGCCGTCCCCACGGCTTaGGGCAGCCGCCGAAGGCTCCTGCTAGGCCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: RERLSQPAVPTA*GSRRRLLLGPA Trigger: AGCCGGGCCTAGCAGGAGCCTTCGGCGGCTGCCCAAAGCCGTGGGGACGGCTGGCTGACTCAGCCGCTCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS CCA 72 bp | TTTGGGCAGCCGCCGAAGGCTCCTGCTAGGCCCGGCTaGCTCACCGGGAAGTTCCCTGCCTCCGTCCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: FGQPPKAPARPG*LTGKFPASVPS Trigger: TGACGGGACGGAGGCAGGGAACTTCCCGGTGAGCCAGCCGGGCCTAGCAGGAGCCTTCGGCGGCTGCCCAAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS TCA 72 bp | CTTGTGGGGACCCAGCAACTCCGTCCAGAGAGCGGCTaGGTCAGCCAGCCGTCCCCACGGCTTTGGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LVGTQQLRPESG*VSQPSPRLWAA Trigger: GGCTGCCCAAAGCCGTGGGGACGGCTGGCTGACTCAGCCGCTCTCTGGACGGAGTTGCTGGGTCCCCACAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS GCA 72 bp | ATCCGGCTCTGGCCAGCCTTCCAGCTGACGCCACTCTaGCAGGGCCCTGCAGCCTCGGAGCGGGATAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: IRLWPAFQLTPL*QGPAASERDRR Trigger: CCTTCTATCCCGCTCCGAGGCTGCAGGGCCCTGGCAGAGTGGCGTCAGCTGGAAGGCTGGCCAGAGCCGGAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS GCA 72 bp | TACTATCTCCGTCAGCCGCCGCCTCGGCCATCTTCCTaGCCGGAGTGCAACAAAATCCGGCTCTGGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: YYLRQPPPRPSS*PECNKIRLWPA Trigger: GGCTGGCCAGAGCCGGATTTTGTTGCACTCCGGGCAGGAAGATGGCCGAGGCGGCGGCTGACGGAGATAGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS CAA 90 bp | ATTGGGCGGCGAAGTCTGACTCCAGAGATTACGGCTGAACTGGGTTaGGAAAGACTGAACCCGCGCCGGTGCTCCTCCTGTTTGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: IGRRSLTPEITAELG*ERLNPRRCSSCLLG Trigger: TCCAAGCAAACAGGAGGAGCACCGGCGCGGGTTCAGTCTTTCCAAACCCAGTTCAGCCGTAATCTCTGGAGTCAGACTTCGCCGCCCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS TCA 72 bp | CTCCAGAGATTACGGCTGAACTGGGTTTGGAAAGACTaGACCCGCGCCGGTGCTCCTCCTGTTTGCTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: LQRLRLNWVWKD*TRAGAPPVCLD Trigger: GTCCAAGCAAACAGGAGGAGCACCGGCGCGGGTTCAGTCTTTCCAAACCCAGTTCAGCCGTAATCTCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS TCA 72 bp | AATTGGGCGGCGAAGTCTGACTCCAGAGATTACGGCTaGACTGGGTTTGGAAAGACTGAACCCGCGCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: NWAAKSDSRDYG*TGFGKTEPAPV Trigger: CACCGGCGCGGGTTCAGTCTTTCCAAACCCAGTTCAGCCGTAATCTCTGGAGTCAGACTTCGCCGCCCAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS GCA 72 bp | AGTTTGAGTACCACAACTCTAACCTGCCACTTCAGCTaGACGGGCAGGCTTGTGGGGACCCAGCAACTCCGT | + |
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Preference number: 6 (lower is better) Translates to: SLSTTTLTCHFS*TGRLVGTQQLR Trigger: ACGGAGTTGCTGGGTCCCCACAAGCCTGCCCGTGCAGCTGAAGTGGCAGGTTAGAGTTGTGGTACTCAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS CAA 72 bp | CGAAGTCTGACTCCAGAGATTACGGCTGAACTGGGTTaGGAAAGACTGAACCCGCGCCGGTGCTCCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RSLTPEITAELG*ERLNPRRCSSC Trigger: ACAGGAGGAGCACCGGCGCGGGTTCAGTCTTTCCAAACCCAGTTCAGCCGTAATCTCTGGAGTCAGACTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS GCA 72 bp | TGCTTGGACTTAAGTTTGAGTACCACAACTCTAACCTaGCACTTCAGCTGCACGGGCAGGCTTGTGGGGACC | + |
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Preference number: 6 (lower is better) Translates to: CLDLSLSTTTLT*HFSCTGRLVGT Trigger: GGTCCCCACAAGCCTGCCCGTGCAGCTGAAGTGGCAGGTTAGAGTTGTGGTACTCAAACTTAAGTCCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS CAA 72 bp | CGCGCCGGTGCTCCTCCTGTTTGCTTGGACTTAAGTTaGAGTACCACAACTCTAACCTGCCACTTCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RAGAPPVCLDLS*STTTLTCHFSC Trigger: GCAGCTGAAGTGGCAGGTTAGAGTTGTGGTACTCAAACTTAAGTCCAAGCAAACAGGAGGAGCACCGGCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS CAA 90 bp | GAACTGGGTTTGGAAAGACTGAACCCGCGCCGGTGCTCCTCCTGTTaGCTTGGACTTAAGTTTGAGTACCACAACTCTAACCTGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: ELGLERLNPRRCSSC*LGLKFEYHNSNLPL Trigger: AAGTGGCAGGTTAGAGTTGTGGTACTCAAACTTAAGTCCAAGCAAACAGGAGGAGCACCGGCGCGGGTTCAGTCTTTCCAAACCCAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS CAA 72 bp | TTGGAAAGACTGAACCCGCGCCGGTGCTCCTCCTGTTaGCTTGGACTTAAGTTTGAGTACCACAACTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: LERLNPRRCSSC*LGLKFEYHNSN Trigger: GTTAGAGTTGTGGTACTCAAACTTAAGTCCAAGCAAACAGGAGGAGCACCGGCGCGGGTTCAGTCTTTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS TCA 72 bp | TCAAAAGCACAAATCCATGAATTGGGCGGCGAAGTCTaGCTCCAGAGATTACGGCTGAACTGGGTTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SKAQIHELGGEV*LQRLRLNWVWK Trigger: TTTCCAAACCCAGTTCAGCCGTAATCTCTGGAGTCAGACTTCGCCGCCCAATTCATGGATTTGTGCTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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| CDS TCA 72 bp | CAAAAACATCAGAGCGGAGTCAAAAGCACAAATCCATaGATTGGGCGGCGAAGTCTGACTCCAGAGATTACG | + |
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Preference number: 6 (lower is better) Translates to: QKHQSGVKSTNP*IGRRSLTPEIT Trigger: CGTAATCTCTGGAGTCAGACTTCGCCGCCCAATTCATGGATTTGTGCTTTTGACTCCGCTCTGATGTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000603538.1 |
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