RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YTHDC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000047188

Ensembl transcript IDs: ENST00000161863.9, ENST00000503857.5, ENST00000506333.1, ENST00000507567.1, ENST00000512600.1, ENST00000514720.1, ENST00000515883.5

Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTTCCCGTCTCTCTGCGGCAACTCTTTCAGCCACAGCGATAGCTaGCAATCGTCTTGGTTGAGTACAAAATATACGGCAGGGGATACC +
Preference number: 1 (lower is better)
Translates to: PFPSLCGNSFSHSDS*QSSWLSTKYTAGDT
Trigger: GGTATCCCCTGCCGTATATTTTGTACTCAACCAAGACGATTGGCAGCTATCGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR GCA 90 bp TCGGATCTGATAACCAATTGTTTGACCAATCCTTTCCCGTCTCTCTaGGGCAACTCTTTCAGCCACAGCGATAGCTGCCAATCGTCTTGG +
Preference number: 1 (lower is better)
Translates to: SDLITNCLTNPFPSL*GNSFSHSDSCQSSW
Trigger: CCAAGACGATTGGCAGCTATCGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGATTGGTCAAACAATTGGTTATCAGATCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR TCA 90 bp GTTCCGGAGTCTGAAATTCCAACATATTCTGGAATCGGAGTCTACTaGACAGACGAAAACAAATTCCAGGTCTACATCGCCCTGCCCTGC +
Preference number: 1 (lower is better)
Translates to: VPESEIPTYSGIGVY*TDENKFQVYIALPC
Trigger: GCAGGGCAGGGCGATGTAGACCTGGAATTTGTTTTCGTCTGTTCAGTAGACTCCGATTCCAGAATATGTTGGAATTTCAGACTCCGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR TCA 90 bp GCTTTACTATGGACATTGGCTCCCATACTGATTAACTGTTCTACTTaGCTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGTTGCA +
Preference number: 1 (lower is better)
Translates to: ALLWTLAPILINCST*LAKPRPAATIRAVA
Trigger: TGCAACAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAGTTAATCAGTATGGGAGCCAATGTCCATAGTAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR TCA 90 bp CCATCCAGCCATTTGATGCTTTACTATGGACATTGGCTCCCATACTaGTTAACTGTTCTACTTGACTTGCAAAGCCACGTCCTGCAGCAA +
Preference number: 1 (lower is better)
Translates to: PSSHLMLYYGHWLPY*LTVLLDLQSHVLQQ
Trigger: TTGCTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAGTTAATCAGTATGGGAGCCAATGTCCATAGTAAAGCATCAAATGGCTGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR GCA 90 bp TACTTGACTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGTTaGACTGGTTTCACTATGTCTGTAATCAACACTAACATTTTCAGT +
Preference number: 1 (lower is better)
Translates to: YLTCKATSCSNHQSC*TGFTMSVINTNIFS
Trigger: ACTGAAAATGTTAGTGTTGATTACAGACATAGTGAAACCAGTGCAACAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGTCAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR GCA 90 bp GGTATCTATGTGTACTGTCAGCAAACCGCTTGTCATCAAACAGGATaGGATCTCTCAGTCCAACAATTTCGTCATATCCAGGCAGAAAAA +
Preference number: 1 (lower is better)
Translates to: GIYVYCQQTACHQTG*DLSVQQFRHIQAEK
Trigger: TTTTTCTGCCTGGATATGACGAAATTGTTGGACTGAGAGATCGCATCCTGTTTGATGACAAGCGGTTTGCTGACAGTACACATAGATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR TCA 90 bp TTCAGGAGCTCTCTGTCTTCAGCACTGAGGTCACTTCCATTTGTTTaGACCAGAGAACTTTCATCTAGATTTCCAAATTCCAGTGTAGCA +
Preference number: 1 (lower is better)
Translates to: FRSSLSSALRSLPFV*TRELSSRFPNSSVA
Trigger: TGCTACACTGGAATTTGGAAATCTAGATGAAAGTTCTCTGGTTCAAACAAATGGAAGTGACCTCAGTGCTGAAGACAGAGAGCTCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR GCA 90 bp TTCATCCACGATAACATGTGTCACAGTCGACAACGTACTATCTCCTaGCATCAATGTACGAAGCAATACCCCATTAGTACAAAATGTCAG +
Preference number: 1 (lower is better)
Translates to: FIHDNMCHSRQRTIS*HQCTKQYPISTKCQ
Trigger: CTGACATTTTGTACTAATGGGGTATTGCTTCGTACATTGATGGCAGGAGATAGTACGTTGTCGACTGTGACACATGTTATCGTGGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR TCA 90 bp CTGCACCAGCATCACAACTATGGCAGATATTGTATAGAAGATGCATaGTCAAATCCAAGTCTACTTTTTCATCATCGAAACTATGATGAT +
Preference number: 1 (lower is better)
Translates to: LHQHHNYGRYCIEDA*SNPSLLFHHRNYDD
Trigger: ATCATCATAGTTTCGATGATGAAAAAGTAGACTTGGATTTGATCATGCATCTTCTATACAATATCTGCCATAGTTGTGATGCTGGTGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR TCA 90 bp ACTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGTTGCACTGGTTTCACTGCCAATCGTCTTGGTTaGGTACAAAATATACGGCAG +
Preference number: 2 (lower is better)
Translates to: TCKATSCSNHQSCCTGFTANRLG*VQNIRQ
Trigger: CTGCCGTATATTTTGTACTCAACCAAGACGATTGGC...AGTGAAACCAGTGCAACAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR GCA 90 bp GAACAGACGAAAACAAATTCCAGGTCTACATCGCCCTGCCCTGCCTTTCCGCTGCAACGTACTATCTCCTaGCATCAATGTACGAAGCAA +
Preference number: 2 (lower is better)
Translates to: EQTKTNSRSTSPCPAFPLQRTIS*HQCTKQ
Trigger: TTGCTTCGTACATTGATGGCAGGAGATAGTACGTTG...CAGCGGAAAGGCAGGGCAGGGCGATGTAGACCTGGAATTTGTTTTCGTCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR CCA 90 bp TCGCCCTGCCCTGCCTTTCCGCTGTATGGCACTAGCTTTGGAAATCCATACCATAGCTGCCAATCGTCTTaGTTGAGTACAAAATATACG +
Preference number: 2 (lower is better)
Translates to: SPCPAFPLYGTSFGNPYHSCQSS*LSTKYT
Trigger: CGTATATTTTGTACTCAACCAAGACGATTGGCAGCT...ATGGTATGGATTTCCAAAGCTAGTGCCATACAGCGGAAAGGCAGGGCAGGGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR CCA 90 bp GAAAACAAATTCCAGGTCTACATCGCCCTGCCCTGCCTTTCCGCTGTATGGCACTCAGAGCTGTTGCACTaGTTTCACTATGTCTGTAAT +
Preference number: 2 (lower is better)
Translates to: ENKFQVYIALPCLSAVWHSELLH*FHYVCN
Trigger: ATTACAGACATAGTGAAACCAGTGCAACAGCTCTGA...GTGCCATACAGCGGAAAGGCAGGGCAGGGCGATGTAGACCTGGAATTTGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR TCA 90 bp TTAACTGTTCTACTTGACTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGTCTTTTTCAGTCAGCTaGCTGAAGACAGCATCACCA +
Preference number: 2 (lower is better)
Translates to: LTVLLDLQSHVLQQPSELSFSVS*LKTASP
Trigger: TGGTGATGCTGTCTTCAGTCAGCTGACTGAAAAAGA...CAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR CAA 90 bp GTGTCTTTGGAGAAACCCTGCTTTCTAATCGGATCTGATAACCAATaGTTTGACCAATCCTTTCCCGTCTCTCTGCGGCAACTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: VSLEKPCFLIGSDNQ*FDQSFPVSLRQLFQ
Trigger: CTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGATTGGTCAAACAATTGGTTATCAGATCCGATTAGAAAGCAGGGTTTCTCCAAAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR CCA 90 bp AAAACAAATTCCAGGTCTACATCGCCCTGCCCTGCCTTTCCGCTGTATGGCACTCCAGCATCACAACTATaGCAGATATTGTATAGAAGA +
Preference number: 2 (lower is better)
Translates to: KTNSRSTSPCPAFPLYGTPASQL*QILYRR
Trigger: TCTTCTATACAATATCTGCCATAGTTGTGATGCTGG...AGTGCCATACAGCGGAAAGGCAGGGCAGGGCGATGTAGACCTGGAATTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR CAA 90 bp AAATGGAAGGCGGCACTTAGAATTGTGGCGCTTGCAGGCTTTAGTTaGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAATTTTTAAA +
Preference number: 2 (lower is better)
Translates to: KWKAALRIVALAGFS*EDAQQASYQLRIFK
Trigger: TTTAAAAATTCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGCCACAATTCTAAGTGCCGCCTTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000161863.9
3UTR-3UTR GCA 90 bp TCCTGCCATCAATGTACGAAGCAATACCCCATTAGTACAAAATGTCAGAAGTGTAGCCACAGCGATAGCTaGCAATCGTCTTGGTTGAGT +
Preference number: 2 (lower is better)
Translates to: SCHQCTKQYPISTKCQKCSHSDS*QSSWLS
Trigger: ACTCAACCAAGACGATTGGCAGCTATCGCTGTGGCT...ACACTTCTGACATTTTGTACTAATGGGGTATTGCTTCGTACATTGATGGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR TCA 90 bp TTAACTGTTCTACTTGACTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGACTATTTTCTTGAGCTaGGTACCATTCTGTAAGTGT +
Preference number: 2 (lower is better)
Translates to: LTVLLDLQSHVLQQPSELTIFLS*VPFCKC
Trigger: ACACTTACAGAATGGTACTCAGCTCAAGAAAATAGT...CAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR CCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCGGCACTTAGAATTGTaGCGCTTGCAGGCTTTAGTT +
Preference number: 2 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDRHLEL*RLQALV
Trigger: AACTAAAGCCTGCAAGCGCCACAATTCTAAGTGCCG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
3UTR-3UTR GCA 90 bp AAACAGGATGCGATCTCTCAGTCCAACAATTTCGTCATATCCAGGCAGAAAAATTCTTTGGAGAAACCCTaGTTTCTAATCGGATCTGAT +
Preference number: 2 (lower is better)
Translates to: KQDAISQSNNFVISRQKNSLEKP*FLIGSD
Trigger: ATCAGATCCGATTAGAAAGCAGGGTTTCTCCAAAGA...ATTTTTCTGCCTGGATATGACGAAATTGTTGGACTGAGAGATCGCATCCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR CCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTGCAGGCTTTAGTTTaGAAGACGCACAGCAAGCAA +
Preference number: 2 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDLQALV*KTHSKQ
Trigger: TTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAA...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
3UTR-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATGGTGCTCAGATGTTCTaGTATATTCAGGCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDGAQMF*YIQAFL
Trigger: AAGAAAGGCCTGAATATATCAGAACATCTGAGCACC...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
3UTR-3UTR GCA 90 bp ACTGCACCAGCATCACAACTATGGCAGATATTGTATAGAAGATGCATGATCAAAAATCGATCCCTTTCATaGACTTCATCCACGATAACA +
Preference number: 2 (lower is better)
Translates to: TAPASQLWQILYRRCMIKNRSLS*TSSTIT
Trigger: TGTTATCGTGGATGAAGTGCATGAAAGGGATCGATT...TTTGATCATGCATCTTCTATACAATATCTGCCATAGTTGTGATGCTGGTGCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGGCACTTAATCTAATCTaGTCAGGAAGAAACTTTGCC +
Preference number: 2 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMALNLI*SGRNFA
Trigger: GGCAAAGTTTCTTCCTGATCAGATTAGATTAAGTGC...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
3UTR-3UTR TCA 90 bp AAATTTTTACCTGTAATGGCATTCTCAAAAGTTCCGGAGTCTGAAATTCCAACAATTAACTGTTCTACTTaGCTTGCAAAGCCACGTCCT +
Preference number: 2 (lower is better)
Translates to: KFLPVMAFSKVPESEIPTINCST*LAKPRP
Trigger: AGGACGTGGCTTTGCAAGTCAAGTAGAACAGTTAAT...TGTTGGAATTTCAGACTCCGGAACTTTTGAGAATGCCATTACAGGTAAAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR GCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGATGTATCATGAGAAGTaGCATCAAACCTGTCTATTT +
Preference number: 2 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMMYHEK*HQTCLF
Trigger: AAATAGACAGGTTTGATGGCACTTCTCATGATACAT...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
3UTR-3UTR CCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTGACTCTTCTAAAATaGTGCTCAGATGTTCTGATA +
Preference number: 2 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDLTLLK*CSDVLI
Trigger: TATCAGAACATCTGAGCACCATTTTAGAAGAGTCAA...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
3UTR-3UTR CAA 90 bp TCGCCCTGCCCTGCCTTTCCGCTGTATGGCACTAGCTTTGGAAATCCATACCATCTGATAACCAATTGTTaGACCAATCCTTTCCCGTCT +
Preference number: 3 (lower is better)
Translates to: SPCPAFPLYGTSFGNPYHLITNC*TNPFPS
Trigger: AGACGGGAAAGGATTGGTCAAACAATTGGTTATCAG...ATGGTATGGATTTCCAAAGCTAGTGCCATACAGCGGAAAGGCAGGGCAGGGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR GCA 72 bp TCTCTCTGCGGCAACTCTTTCAGCCACAGCGATAGCTaGCAATCGTCTTGGTTGAGTACAAAATATACGGCA +
Preference number: 3 (lower is better)
Translates to: SLCGNSFSHSDS*QSSWLSTKYTA
Trigger: TGCCGTATATTTTGTACTCAACCAAGACGATTGGCAGCTATCGCTGTGGCTGAAAGAGTTGCCGCAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR GCA 72 bp ATAACCAATTGTTTGACCAATCCTTTCCCGTCTCTCTaGGGCAACTCTTTCAGCCACAGCGATAGCTGCCAA +
Preference number: 3 (lower is better)
Translates to: ITNCLTNPFPSL*GNSFSHSDSCQ
Trigger: TTGGCAGCTATCGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGATTGGTCAAACAATTGGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR TCA 72 bp TGGACATTGGCTCCCATACTGATTAACTGTTCTACTTaGCTTGCAAAGCCACGTCCTGCAGCAACCATCAGA +
Preference number: 3 (lower is better)
Translates to: WTLAPILINCST*LAKPRPAATIR
Trigger: TCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAGTTAATCAGTATGGGAGCCAATGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR GCA 72 bp GTGTACTGTCAGCAAACCGCTTGTCATCAAACAGGATaGGATCTCTCAGTCCAACAATTTCGTCATATCCAG +
Preference number: 3 (lower is better)
Translates to: VYCQQTACHQTG*DLSVQQFRHIQ
Trigger: CTGGATATGACGAAATTGTTGGACTGAGAGATCGCATCCTGTTTGATGACAAGCGGTTTGCTGACAGTACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR CCA 72 bp AACTCTTTCAGCCACAGCGATAGCTGCCAATCGTCTTaGTTGAGTACAAAATATACGGCAGGGGATACCATT +
Preference number: 3 (lower is better)
Translates to: NSFSHSDSCQSS*LSTKYTAGDTI
Trigger: AATGGTATCCCCTGCCGTATATTTTGTACTCAACCAAGACGATTGGCAGCTATCGCTGTGGCTGAAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR CAA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATAGGCGGCACTTAGAATaGTGGCGCTTGCAGGCTTTA +
Preference number: 3 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDRRHLE*WRLQAL
Trigger: TAAAGCCTGCAAGCGCCACAATTCTAAGTGCCGCCT...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
3UTR GCA 72 bp GATAACATGTGTCACAGTCGACAACGTACTATCTCCTaGCATCAATGTACGAAGCAATACCCCATTAGTACA +
Preference number: 3 (lower is better)
Translates to: DNMCHSRQRTIS*HQCTKQYPIST
Trigger: TGTACTAATGGGGTATTGCTTCGTACATTGATGGCAGGAGATAGTACGTTGTCGACTGTGACACATGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR CAA 90 bp GAGCTCTCTGTCTTCAGCACTGAGGTCACTTCCATTTGTTTGAACCAGAGAACTTGTAAGTGTGGTTTGTaGTTTCTCTTCTTGCTGTTT +
Preference number: 3 (lower is better)
Translates to: ELSVFSTEVTSICLNQRTCKCGL*FLFLLF
Trigger: AAACAGCAAGAAGAGAAACAACAAACCACACTTACA...AGTTCTCTGGTTCAAACAAATGGAAGTGACCTCAGTGCTGAAGACAGAGAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR CAA 90 bp ACTGCACCAGCATCACAACTATGGCAGATATTGTATAGAAGATGCATGATCAAACAACCATCAGAGCTGTaGCACTGGTTTCACTATGTC +
Preference number: 3 (lower is better)
Translates to: TAPASQLWQILYRRCMIKQPSEL*HWFHYV
Trigger: GACATAGTGAAACCAGTGCAACAGCTCTGATGGTTG...TTTGATCATGCATCTTCTATACAATATCTGCCATAGTTGTGATGCTGGTGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR TCA 72 bp CATTTGATGCTTTACTATGGACATTGGCTCCCATACTaGTTAACTGTTCTACTTGACTTGCAAAGCCACGTC +
Preference number: 3 (lower is better)
Translates to: HLMLYYGHWLPY*LTVLLDLQSHV
Trigger: GACGTGGCTTTGCAAGTCAAGTAGAACAGTTAATCAGTATGGGAGCCAATGTCCATAGTAAAGCATCAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR TCA 72 bp TCTGAAATTCCAACATATTCTGGAATCGGAGTCTACTaGACAGACGAAAACAAATTCCAGGTCTACATCGCC +
Preference number: 3 (lower is better)
Translates to: SEIPTYSGIGVY*TDENKFQVYIA
Trigger: GGCGATGTAGACCTGGAATTTGTTTTCGTCTGTTCAGTAGACTCCGATTCCAGAATATGTTGGAATTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR CAA 90 bp AAATTTTTACCTGTAATGGCATTCTCAAAAGTTCCGGAGTCTGAAATTCCAACACTGTCAGCAAACCGCTaGTCATCAAACAGGATGCGA +
Preference number: 3 (lower is better)
Translates to: KFLPVMAFSKVPESEIPTLSANR*SSNRMR
Trigger: TCGCATCCTGTTTGATGACAAGCGGTTTGCTGACAG...TGTTGGAATTTCAGACTCCGGAACTTTTGAGAATGCCATTACAGGTAAAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR-3UTR CAA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTAGAATTGTGGCGCTaGCAGGCTTTAGTTTGGAAG +
Preference number: 3 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDLELWR*QALVWK
Trigger: CTTCCAAACTAAAGCCTGCAAGCGCCACAATTCTAA...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
3UTR-3UTR CAA 90 bp CCATTTGATGCTTTACTATGGACATTGGCTCCCATACTGATTAACTGTTCTACTTGCCAATCGTCTTGGTaGAGTACAAAATATACGGCA +
Preference number: 3 (lower is better)
Translates to: PFDALLWTLAPILINCSTCQSSW*STKYTA
Trigger: TGCCGTATATTTTGTACTCAACCAAGACGATTGGCA...AGTAGAACAGTTAATCAGTATGGGAGCCAATGTCCATAGTAAAGCATCAAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR TCA 72 bp TTTACCTGTAATGGCATTCTCAAAAGTTCCGGAGTCTaGAATTCCAACATATTCTGGAATCGGAGTCTACTG +
Preference number: 3 (lower is better)
Translates to: FTCNGILKSSGV*NSNIFWNRSLL
Trigger: CAGTAGACTCCGATTCCAGAATATGTTGGAATTTCAGACTCCGGAACTTTTGAGAATGCCATTACAGGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR TCA 72 bp CATCACAACTATGGCAGATATTGTATAGAAGATGCATaGTCAAATCCAAGTCTACTTTTTCATCATCGAAAC +
Preference number: 3 (lower is better)
Translates to: HHNYGRYCIEDA*SNPSLLFHHRN
Trigger: GTTTCGATGATGAAAAAGTAGACTTGGATTTGATCATGCATCTTCTATACAATATCTGCCATAGTTGTGATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR GCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAGCCGCGGGGAGACGCTaGTCGGCCTGGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRAAGRR*SAWTLP
Trigger: GGGCAATGTCCAGGCCGAGCAGCGTCTCCCCGCGGC...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp TTAACTGTTCTACTTGACTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGCGGCCTGTGTTGGGCTaGGGTCACCAGAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LTVLLDLQSHVLQQPSELRPVLG*GHQKGL
Trigger: GAGGCCTTTCTGGTGACCTCAGCCCAACACAGGCCG...CAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp AAAACAAATTCCAGGTCTACATCGCCCTGCCCTGCCTTTCCGCTGTATGGCACTGCTCCAGCGCGATATTaGCTGCGATCTTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: KTNSRSTSPCPAFPLYGTAPARY*LRSSPP
Trigger: AGGAGGTGAAGATCGCAGTCAATATCGCGCTGGAGC...AGTGCCATACAGCGGAAAGGCAGGGCAGGGCGATGTAGACCTGGAATTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR GCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACCTTTCCCGTCTCTCTaGGGCAACTCTTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRPFPSL*GNSFSH
Trigger: GTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACATGCCTGCCACCAATaGAGCTTTAACGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRHACHQ*SFNDSP
Trigger: TGGGCTGTCGTTAAAGCTGCATTGGTGGCAGGCATG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTGTCCTTCAGCCCCTTaGCCCGGCCGCCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDCPSAP*PGRRPQ
Trigger: CTGGGGGCGGCGGCCGGGCCAAGGGGCTGAAGGACA...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp TTAACTGTTCTACTTGACTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGGCTCGGCCTGGACATTaGCCTGAAGAGATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LTVLLDLQSHVLQQPSELARPGH*PEEMVS
Trigger: AGAGACCATCTCTTCAGGGCAATGTCCAGGCCGAGC...CAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR GCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGATCACCTCCTCATCAATaGGAATGTCCTTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRSPPHQ*ECPSAP
Trigger: AGGGGCTGAAGGACATTCGCATTGATGAGGAGGTGA...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp ACTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGTTGCACTGGTTTCACTTCACCTCCTCATCAATaGGAATGTCCTTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TCKATSCSNHQSCCTGFTSPPHQ*ECPSAP
Trigger: AGGGGCTGAAGGACATTCGCATTGATGAGGAGGTGA...AGTGAAACCAGTGCAACAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR GCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAGTCGCCCACTTGTCTTaGTCATTTCCCGGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRVAHLS*SFPGFQ
Trigger: CTGAAAACCGGGAAATGAGCAAGACAAGTGGGCGAC...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAAGCCACAGCGATAGCTaGCAATCGTCTTGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRSHSDS*QSSWLS
Trigger: ACTCAACCAAGACGATTGGCAGCTATCGCTGTGGCT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACAGTGCCTTAATTGCTaGAGCTTGACCATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRQCLNC*SLTIGW
Trigger: CCAGCCAATGGTCAAGCTGCAGCAATTAAGGCACTG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
3UTR CAA 72 bp GCGGCACTTAGAATTGTGGCGCTTGCAGGCTTTAGTTaGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: AALRIVALAGFS*EDAQQASYQLR
Trigger: TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGCCACAATTCTAAGTGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGTTGCACTGGTTTCACTTTTCAGTCAGCTGACTaGAGACAGCATCACCACCAT +
Preference number: 4 (lower is better)
Translates to: TCKATSCSNHQSCCTGFTFQSAD*RQHHHH
Trigger: ATGGTGGTGATGCTGTCTTCAGTCAGCTGACTGAAA...AGTGAAACCAGTGCAACAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAAGACGTTCCCATAACTaGAGCAACTGTTCACCAACC +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRRRSHN*SNCSPT
Trigger: GGTTGGTGAACAGTTGCTCCAGTTATGGGAACGTCT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAGCCAATCGTCTTGGTTaGGTACAAAATATACGGCAG +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRANRLG*VQNIRQ
Trigger: CTGCCGTATATTTTGTACTCAACCAAGACGATTGGC...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GAACAGACGAAAACAAATTCCAGGTCTACATCGCCCTGCCCTGCCTTTCCGCTGCATTGGCTCCCATACTaGTTAACTGTTCTACTTGAC +
Preference number: 4 (lower is better)
Translates to: EQTKTNSRSTSPCPAFPLHWLPY*LTVLLD
Trigger: GTCAAGTAGAACAGTTAATCAGTATGGGAGCCAATG...CAGCGGAAAGGCAGGGCAGGGCGATGTAGACCTGGAATTTGTTTTCGTCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp GAAAACAAATTCCAGGTCTACATCGCCCTGCCCTGCCTTTCCGCTGTATGGCACGGAATCGGAGTCTACTaGACAGACGAAAACAAATTC +
Preference number: 4 (lower is better)
Translates to: ENKFQVYIALPCLSAVWHGIGVY*TDENKF
Trigger: GAATTTGTTTTCGTCTGTTCAGTAGACTCCGATTCC...GTGCCATACAGCGGAAAGGCAGGGCAGGGCGATGTAGACCTGGAATTTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR GCA 90 bp GAAAACAAATTCCAGGTCTACATCGCCCTGCCCTGCCTTTCCGCTGTATGGCACCAACGTACTATCTCCTaGCATCAATGTACGAAGCAA +
Preference number: 4 (lower is better)
Translates to: ENKFQVYIALPCLSAVWHQRTIS*HQCTKQ
Trigger: TTGCTTCGTACATTGATGGCAGGAGATAGTACGTTG...GTGCCATACAGCGGAAAGGCAGGGCAGGGCGATGTAGACCTGGAATTTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAACTAGCACAAGGACTTaGGTAACTACTGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRTSTRT*VTTAVC
Trigger: ACAGACAGCAGTAGTTACCCAAGTCCTTGTGCTAGT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCGGCCTGTGTTGGGCTaGGGTCACCAGAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDRPVLG*GHQKGL
Trigger: GAGGCCTTTCTGGTGACCTCAGCCCAACACAGGCCG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGATGCCATCCAGCCATTTaGTGCTTTACTATGGACATT +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRCHPAI*CFTMDI
Trigger: AATGTCCATAGTAAAGCATCAAATGGCTGGATGGCA...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGTTGCACTGGTTTCACTTGCCATCCAGCCATTTaGTGCTTTACTATGGACATT +
Preference number: 4 (lower is better)
Translates to: TCKATSCSNHQSCCTGFTCHPAI*CFTMDI
Trigger: AATGTCCATAGTAAAGCATCAAATGGCTGGATGGCA...AGTGAAACCAGTGCAACAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAAAGGATGAAGGTTCCTaGAGAGCATTACTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRKDEGS*RALLAN
Trigger: ATTGGCAAGTAATGCTCTTCAGGAACCTTCATCCTT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAGTAGCTTCATCAACTTaGGACCAAGGTTTAGATGGA +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRVASST*DQGLDG
Trigger: TCCATCTAAACCTTGGTCTCAAGTTGATGAAGCTAC...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp ACTTCATCCACGATAACATGTGTCACAGTCGACAACGTACTATCTCCTGCCATCCTGTTCTACTTGACTTaGAAAGCCACGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TSSTITCVTVDNVLSPAILFYLT*KATSCS
Trigger: GCTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAG...GATGGCAGGAGATAGTACGTTGTCGACTGTGACACATGTTATCGTGGATGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR GCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAATTAGGATACATGCCTaGCACCAATGCAGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRIRIHA*HQCSFN
Trigger: GTTAAAGCTGCATTGGTGGCAGGCATGTATCCTAAT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp CTATCTCCTGCCATCAATGTACGAAGCAATACCCCATTAGTACAAAATGTCAGAGGAGACGGCCTGTGTTaGGCTGAGGTCACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LSPAINVRSNTPLVQNVRGDGLC*AEVTRK
Trigger: CTTTCTGGTGACCTCAGCCCAACACAGGCCGTCTCC...TCTGACATTTTGTACTAATGGGGTATTGCTTCGTACATTGATGGCAGGAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp TCCTGCCATCAATGTACGAAGCAATACCCCATTAGTACAAAATGTCAGAAGTGTATTGCCCTGAAGAGATaGTCTCTCCGCACGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SCHQCTKQYPISTKCQKCIALKR*SLRTGA
Trigger: CGCTCCCGTGCGGAGAGACCATCTCTTCAGGGCAAT...ACACTTCTGACATTTTGTACTAATGGGGTATTGCTTCGTACATTGATGGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp GAGCTCTCTGTCTTCAGCACTGAGGTCACTTCCATTTGTTTGAACCAGAGAACTAATTCCATTTCTCTCTaGTCCCCGTATCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: ELSVFSTEVTSICLNQRTNSISL*SPYRKR
Trigger: GCGCTTCCGATACGGGGACCAGAGAGAAATGGAATT...AGTTCTCTGGTTCAAACAAATGGAAGTGACCTCAGTGCTGAAGACAGAGAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp GAACAGACGAAAACAAATTCCAGGTCTACATCGCCCTGCCCTGCCTTTCCGCTGTTTGATGCTTTACTATaGACATTGGCTCCCATACTG +
Preference number: 4 (lower is better)
Translates to: EQTKTNSRSTSPCPAFPLFDALL*TLAPIL
Trigger: CAGTATGGGAGCCAATGTCCATAGTAAAGCATCAAA...CAGCGGAAAGGCAGGGCAGGGCGATGTAGACCTGGAATTTGTTTTCGTCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp GAACAGACGAAAACAAATTCCAGGTCTACATCGCCCTGCCCTGCCTTTCCGCTGACTATTTTCTTGAGCTaGGTACCATTCTGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: EQTKTNSRSTSPCPAFPLTIFLS*VPFCKC
Trigger: ACACTTACAGAATGGTACTCAGCTCAAGAAAATAGT...CAGCGGAAAGGCAGGGCAGGGCGATGTAGACCTGGAATTTGTTTTCGTCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACAGATACCCTTCTGTTaGGAAATTTCAAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRQIPFC*EISRFL
Trigger: GAGAAACCTTGAAATTTCTCAACAGAAGGGTATCTG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp CTATCTCCTGCCATCAATGTACGAAGCAATACCCCATTAGTACAAAATGTCAGACCTTTCCCGTCTCTCTaGGGCAACTCTTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LSPAINVRSNTPLVQNVRPFPSL*GNSFSH
Trigger: GTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGG...TCTGACATTTTGTACTAATGGGGTATTGCTTCGTACATTGATGGCAGGAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR GCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAAATCGATCCCTTTCATaGACTTCATCCACGATAACA +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRNRSLS*TSSTIT
Trigger: TGTTATCGTGGATGAAGTGCATGAAAGGGATCGATT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp AAAACAAATTCCAGGTCTACATCGCCCTGCCCTGCCTTTCCGCTGTATGGCACTAATCGATCCCTTTCATaGACTTCATCCACGATAACA +
Preference number: 4 (lower is better)
Translates to: KTNSRSTSPCPAFPLYGTNRSLS*TSSTIT
Trigger: TGTTATCGTGGATGAAGTGCATGAAAGGGATCGATT...AGTGCCATACAGCGGAAAGGCAGGGCAGGGCGATGTAGACCTGGAATTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGATTCTCCTCTTTTCACTaGAATCTGAGGTATGCCATT +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRFSSFH*NLRYAI
Trigger: AATGGCATACCTCAGATTCCAGTGAAAAGAGGAGAA...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp TCCTGCCATCAATGTACGAAGCAATACCCCATTAGTACAAAATGTCAGAAGTGTCTAGCTGACAGCCAATaGCAAAGACCGTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: SCHQCTKQYPISTKCQKCLADSQ*QRPWES
Trigger: GGATTCCCACGGTCTTTGTCATTGGCTGTCAGCTAG...ACACTTCTGACATTTTGTACTAATGGGGTATTGCTTCGTACATTGATGGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATGCCTGGACATTGCCCTaGAGAGATGGTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDAWTLP*RDGLSA
Trigger: TGCGGAGAGACCATCTCTTCAGGGCAATGTCCAGGC...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAACTATTTTCTTGAGCTaGGTACCATTCTGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRTIFLS*VPFCKC
Trigger: ACACTTACAGAATGGTACTCAGCTCAAGAAAATAGT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCACCAGCATCACAACTATGGCAGATATTGTATAGAAGATGCATGATCAAATCCAGCAGAAGTGAAGCCTaGGCCATTGATATCACGGCC +
Preference number: 4 (lower is better)
Translates to: APASQLWQILYRRCMIKSSRSEA*AIDITA
Trigger: GGCCGTGATATCAATGGCGCAGGCTTCACTTCTGCT...GGATTTGATCATGCATCTTCTATACAATATCTGCCATAGTTGTGATGCTGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGGGAGACGGCCTGTGTTaGGCTGAGGTCACCAGAAAG +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMGDGLC*AEVTRK
Trigger: CTTTCTGGTGACCTCAGCCCAACACAGGCCGTCTCC...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGATTGCCCTGAAGAGATaGTCTCTCCGCACGGGAGCG +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMIALKR*SLRTGA
Trigger: CGCTCCCGTGCGGAGAGACCATCTCTTCAGGGCAAT...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACCAGCATCACAACTATaGCAGATATTGTATAGAAGA +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRPASQL*QILYRR
Trigger: TCTTCTATACAATATCTGCCATAGTTGTGATGCTGG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAAATTCCAACATATTCTaGAATCGGAGTCTACTGAAC +
Preference number: 4 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRNSNIF*NRSLLN
Trigger: GTTCAGTAGACTCCGATTCCAGAATATGTTGGAATT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
3UTR CAA 72 bp GAGAAACCCTGCTTTCTAATCGGATCTGATAACCAATaGTTTGACCAATCCTTTCCCGTCTCTCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: EKPCFLIGSDNQ*FDQSFPVSLRQ
Trigger: TTGCCGCAGAGAGACGGGAAAGGATTGGTCAAACAATTGGTTATCAGATCCGATTAGAAAGCAGGGTTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACGCCAGGCCTGCTAGCTaGCAGCCAATGACAAAGACC +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNARPAS*QPMTKT
Trigger: GGTCTTTGTCATTGGCTGTCAGCTAGCAGGCCTGGC...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp AAATTTTTACCTGTAATGGCATTCTCAAAAGTTCCGGAGTCTGAAATTCCAACAGCCTGGACATTGCCCTaGAGAGATGGTCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: KFLPVMAFSKVPESEIPTAWTLP*RDGLSA
Trigger: TGCGGAGAGACCATCTCTTCAGGGCAATGTCCAGGC...TGTTGGAATTTCAGACTCCGGAACTTTTGAGAATGCCATTACAGGTAAAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGGCTCCAGCGCGATATTaGCTGCGATCTTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMAPARY*LRSSPP
Trigger: AGGAGGTGAAGATCGCAGTCAATATCGCGCTGGAGC...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp ATGAAGCATAAAGACTTGGTATCTATGTGTACTGTCAGCAAACCGCTTGTCATCCAGCGCGATATTGACTaGGATCTTCACCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: MKHKDLVSMCTVSKPLVIQRDID*DLHLLI
Trigger: GATGAGGAGGTGAAGATCGCAGTCAATATCGCGCTG...GATGACAAGCGGTTTGCTGACAGTACACATAGATACCAAGTCTTTATGCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR CAA 72 bp TCTTTCAGCCACAGCGATAGCTGCCAATCGTCTTGGTaGAGTACAAAATATACGGCAGGGGATACCATTTTT +
Preference number: 4 (lower is better)
Translates to: SFSHSDSCQSSW*STKYTAGDTIF
Trigger: AAAAATGGTATCCCCTGCCGTATATTTTGTACTCAACCAAGACGATTGGCAGCTATCGCTGTGGCTGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
3UTR CAA 72 bp AAGACTTGGTATCTATGTGTACTGTCAGCAAACCGCTaGTCATCAAACAGGATGCGATCTCTCAGTCCAACA +
Preference number: 4 (lower is better)
Translates to: KTWYLCVLSANR*SSNRMRSLSPT
Trigger: TGTTGGACTGAGAGATCGCATCCTGTTTGATGACAAGCGGTTTGCTGACAGTACACATAGATACCAAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCTAGCTGACAGCCAATaGCAAAGACCGTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDLADSQ*QRPWES
Trigger: GGATTCCCACGGTCTTTGTCATTGGCTGTCAGCTAG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATGAGGTATGCCATTGTTaGGTCGCCCACTTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDEVCHC*VAHLSC
Trigger: GCAAGACAAGTGGGCGACTCAACAATGGCATACCTC...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGAGGCCTGGAATGCTCTaGGAAGTGCCATATGGTCAC +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMRPGML*EVPYGH
Trigger: GTGACCATATGGCACTTCTCAGAGCATTCCAGGCCT...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCCTCTGGCTCCAGTGTaGAATGGAGCCACTCATCAA +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMPLAPV*NGATHQ
Trigger: TTGATGAGTGGCTCCATTTCACACTGGAGCCAGAGG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCAGAGAAGACTGATCTaGTCGGTCCTCAGTACCTCG +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDQRRLI*SVLSTS
Trigger: CGAGGTACTGAGGACCGATCAGATCAGTCTTCTCTG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACGCAGAGCCCCAGTCCTaGCTCTTTTCCCTTCCAATC +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNAEPQS*LFSLPI
Trigger: GATTGGAAGGGAAAAGAGTCAGGACTGGGGCTCTGC...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACGCTCGGCCTGGACATTaGCCTGAAGAGATGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNARPGH*PEEMVS
Trigger: AGAGACCATCTCTTCAGGGCAATGTCCAGGCCGAGC...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GAGCTCTCTGTCTTCAGCACTGAGGTCACTTCCATTTGTTTGAACCAGAGAACTTCTTTGGAGAAACCCTaGTTTCTAATCGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: ELSVFSTEVTSICLNQRTSLEKP*FLIGSD
Trigger: ATCAGATCCGATTAGAAAGCAGGGTTTCTCCAAAGA...AGTTCTCTGGTTCAAACAAATGGAAGTGACCTCAGTGCTGAAGACAGAGAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR GCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCCACCCATCACTTCGTaGTTTTTGCCAGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDPPITS*FLPGLE
Trigger: TTCCAGGCCTGGCAAAAAGCACGAAGTGATGGGTGG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGGGGCAGTGCCTTAATTaGTGCAGCTTGACCATTGGC +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMGQCLN*CSLTIG
Trigger: GCCAATGGTCAAGCTGCAGCAATTAAGGCACTGCCC...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp CACAGCGATAGCTGCCAATCGTCTTGGTTGAGTACAAAATATACGGCAGGGGATCCAGCATCACAACTATaGCAGATATTGTATAGAAGA +
Preference number: 4 (lower is better)
Translates to: HSDSCQSSWLSTKYTAGDPASQL*QILYRR
Trigger: TCTTCTATACAATATCTGCCATAGTTGTGATGCTGG...ATCCCCTGCCGTATATTTTGTACTCAACCAAGACGATTGGCAGCTATCGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGGCTTTTTGCCAGGCCTaGAATGCTCTGAGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMAFCQA*NALRSA
Trigger: GGCACTTCTCAGAGCATTCCAGGCCTGGCAAAAAGC...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp CATGTGTCACAGTCGACAACGTACTATCTCCTGCCATCAATGTACGAAGCAATAAAAAGTTCCGGAGTCTaGAATTCCAACATATTCTGG +
Preference number: 4 (lower is better)
Translates to: HVSQSTTYYLLPSMYEAIKSSGV*NSNIFW
Trigger: CCAGAATATGTTGGAATTTCAGACTCCGGAACTTTT...TATTGCTTCGTACATTGATGGCAGGAGATAGTACGTTGTCGACTGTGACACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR GCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACAGCAGAAGTGAAGCCTaGGCCATTGATATCACGGCC +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNSRSEA*AIDITA
Trigger: GGCCGTGATATCAATGGCGCAGGCTTCACTTCTGCT...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCAGCGCGATATTGACTaGGATCTTCACCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDQRDID*DLHLLI
Trigger: GATGAGGAGGTGAAGATCGCAGTCAATATCGCGCTG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTCACTTCGTGCTTTTTaGCAGGCCTGGAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDSLRAF*QAWNAL
Trigger: CAGAGCATTCCAGGCCTGGCAAAAAGCACGAAGTGA...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCCAATCTGTGGGCAGTaGCTTAATTGCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDPICGQ*LNCCSL
Trigger: CAAGCTGCAGCAATTAAGGCACTGCCCACAGATTGG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGAGAGGTTCTAGTTCCTaGCCATCCCTGCTTATCTGC +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMRGSSS*PSLLIC
Trigger: GCAGATAAGCAGGGATGGGCAGGAACTAGAACCTCT...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATAATTCCATTTCTCTCTaGTCCCCGTATCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDNSISL*SPYRKR
Trigger: GCGCTTCCGATACGGGGACCAGAGAGAAATGGAATT...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGATAGGCCTTGGCCTTTaGCCAATCCCAGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMIGLGL*PIPDGC
Trigger: ACAACCATCTGGGATTGGCCAAAGGCCAAGGCCTAT...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTGCACCAGCATCACAACTATGGCAGATATTGTATAGAAGATGCATGATCAAAACAGTTCTCTGCCTCTaGGATTCAGGCTTGAAACTA +
Preference number: 4 (lower is better)
Translates to: TAPASQLWQILYRRCMIKTVLCL*DSGLKL
Trigger: TAGTTTCAAGCCTGAATCTCAGAGGCAGAGAACTGT...TTTGATCATGCATCTTCTATACAATATCTGCCATAGTTGTGATGCTGGTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGTTTCAGTCAGCTGACTaGAGACAGCATCACCACCAT +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMFQSAD*RQHHHH
Trigger: ATGGTGGTGATGCTGTCTTCAGTCAGCTGACTGAAA...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp CTATCTCCTGCCATCAATGTACGAAGCAATACCCCATTAGTACAAAATGTCAGAATTAACTGTTCTACTTaGCTTGCAAAGCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: LSPAINVRSNTPLVQNVRINCST*LAKPRP
Trigger: AGGACGTGGCTTTGCAAGTCAAGTAGAACAGTTAAT...TCTGACATTTTGTACTAATGGGGTATTGCTTCGTACATTGATGGCAGGAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp ACTGCACCAGCATCACAACTATGGCAGATATTGTATAGAAGATGCATGATCAAACTCTGTCTTCAGCACTaGGGTCACTTCCATTTGTTT +
Preference number: 4 (lower is better)
Translates to: TAPASQLWQILYRRCMIKLCLQH*GHFHLF
Trigger: AAACAAATGGAAGTGACCTCAGTGCTGAAGACAGAG...TTTGATCATGCATCTTCTATACAATATCTGCCATAGTTGTGATGCTGGTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGAGGCTGACTGAGAACTaGAGCAGGATGAAATCGTAC +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMRLTEN*SRMKSY
Trigger: GTACGATTTCATCCTGCTTCAGTTCTCAGTCAGCCT...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp AAATTTTTACCTGTAATGGCATTCTCAAAAGTTCCGGAGTCTGAAATTCCAACAAGCCACAGCGATAGCTaGCAATCGTCTTGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: KFLPVMAFSKVPESEIPTSHSDS*QSSWLS
Trigger: ACTCAACCAAGACGATTGGCAGCTATCGCTGTGGCT...TGTTGGAATTTCAGACTCCGGAACTTTTGAGAATGCCATTACAGGTAAAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR GCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACCTGTTCTACTTGACTTaGAAAGCCACGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNLFYLT*KATSCS
Trigger: GCTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAG...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACTTGCCAGGCCTGGAATaGTCTGAGAAGTGCCATATG +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNLPGLE*SEKCHM
Trigger: CATATGGCACTTCTCAGAGCATTCCAGGCCTGGCAA...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCTGAGAAGTGCCATATaGTCACTGAAAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMLRSAI*SLKAPA
Trigger: TGCAGGAGCTTTCAGTGACCATATGGCACTTCTCAG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGTCTTTTTCAGTCAGCTaGCTGAAGACAGCATCACCA +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMSFSVS*LKTASP
Trigger: TGGTGATGCTGTCTTCAGTCAGCTGACTGAAAAAGA...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCTCTGTCTTCAGCACTaGGGTCACTTCCATTTGTTT +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDLCLQH*GHFHLF
Trigger: AAACAAATGGAAGTGACCTCAGTGCTGAAGACAGAG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACCCTGATGCTCTAAGTTaGCCAAGCAACTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNPDALS*PSNCVL
Trigger: GAGAACACAGTTGCTTGGTCAACTTAGAGCATCAGG...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACTTAATTGCTGCAGCTTaGCCATTGGCTGGAGGAATC +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNLIAAA*PLAGGI
Trigger: GATTCCTCCAGCCAATGGTCAAGCTGCAGCAATTAA...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGGACAGGCGTCACTGCTaGACAACATCTAATATTAGC +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMDRRHC*TTSNIS
Trigger: GCTAATATTAGATGTTGTTCAGCAGTGACGCCTGTC...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCTATCTTTGTACTTCTaGGGTGGGTGTAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMLSLYF*GGCNAG
Trigger: TCCAGCATTACACCCACCTCAGAAGTACAAAGATAG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATGATTTCAGAGAAGACTaGTCTGATCGGTCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDDFRED*SDRSSV
Trigger: TACTGAGGACCGATCAGATCAGTCTTCTCTGAAATC...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACCCTACAAAGCATAGCTaGACGTTTTTGAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNPTKHS*TFLRGL
Trigger: CAGGCCTCTCAAAAACGTGCAGCTATGCTTTGTAGG...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATGAATGCTCTGAGAAGTaGCATATGGTCACTGAAAGC +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDECSEK*HMVTES
Trigger: GCTTTCAGTGACCATATGGCACTTCTCAGAGCATTC...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCTGAAGAGCATTACTTaGCAATCTAGCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMLKSIT*QSSWST
Trigger: TGTGGACCAGCTAGATTGGCAAGTAATGCTCTTCAG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACCACTTCTGTCTGAGCTaGAGCAATAAACTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNHFCLS*SNKLAA
Trigger: GGCAGCTAGTTTATTGCTGCAGCTCAGACAGAAGTG...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp GCACCAGCATCACAACTATGGCAGATATTGTATAGAAGATGCATGATCAAATCCTCAGAGCTGTTGCACTaGTTTCACTATGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: APASQLWQILYRRCMIKSSELLH*FHYVCN
Trigger: ATTACAGACATAGTGAAACCAGTGCAACAGCTCTGA...GGATTTGATCATGCATCTTCTATACAATATCTGCCATAGTTGTGATGCTGGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCTGGGGCTAACAGCTTaGTATGTAAGCAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDLGLTA*YVSKVP
Trigger: AGGAACTTTGCTTACATACCAAGCTGTTAGCCCCAG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACGGCTCCAGTGTGAAATaGAGCCACTCATCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNGSSVK*SHSSSF
Trigger: GAAACTTGATGAGTGGCTCCATTTCACACTGGAGCC...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGTCGAACAGGCATGTTTaGTCTTGGCGAAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMSNRHV*SWRRRF
Trigger: AAATCTCCTTCGCCAAGACCAAACATGCCTGTTCGA...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACCGGCACTTAGAATTGTaGCGCTTGCAGGCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNRHLEL*RLQALV
Trigger: AACTAAAGCCTGCAAGCGCCACAATTCTAAGTGCCG...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGTGCATGAGCTGTTTCTaGTCCATCTTTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMCMSCF*SIFLLH
Trigger: GTGAAGAAGAAAGATGGATCAGAAACAGCTCATGCA...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACCAGGTCATCATTGCATaGGCTGTTTCTGATCCATCT +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNQVIIA*AVSDPS
Trigger: AGATGGATCAGAAACAGCTCATGCAATGATGACCTG...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCTTTTCACTGGAATCTaGGGTATGCCATTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMLFTGI*GMPLLS
Trigger: ACTCAACAATGGCATACCTCAGATTCCAGTGAAAAG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACACAGTTCTCTGCCTCTaGGATTCAGGCTTGAAACTA +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNTVLCL*DSGLKL
Trigger: TAGTTTCAAGCCTGAATCTCAGAGGCAGAGAACTGT...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp AAATTTTTACCTGTAATGGCATTCTCAAAAGTTCCGGAGTCTGAAATTCCAACATCTTTTTCAGTCAGCTaGCTGAAGACAGCATCACCA +
Preference number: 4 (lower is better)
Translates to: KFLPVMAFSKVPESEIPTSFSVS*LKTASP
Trigger: TGGTGATGCTGTCTTCAGTCAGCTGACTGAAAAAGA...TGTTGGAATTTCAGACTCCGGAACTTTTGAGAATGCCATTACAGGTAAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATATTAACTGTTCTACTTaGCTTGCAAAGCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDINCST*LAKPRP
Trigger: AGGACGTGGCTTTGCAAGTCAAGTAGAACAGTTAAT...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCATTGGCTCCCATACTaGTTAACTGTTCTACTTGAC +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDHWLPY*LTVLLD
Trigger: GTCAAGTAGAACAGTTAATCAGTATGGGAGCCAATG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATGGAATCGGAGTCTACTaGACAGACGAAAACAAATTC +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDGIGVY*TDENKF
Trigger: GAATTTGTTTTCGTCTGTTCAGTAGACTCCGATTCC...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGTGCTCTAACAAAACCTaGTGCTCTAAGTTGACCAAG +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMCSNKT*CSKLTK
Trigger: CTTGGTCAACTTAGAGCATCAGGTTTTGTTAGAGCA...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATATCCACTCTAAAGGATaGAGGTTCCTGAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDIHSKG*RFLKSI
Trigger: AATGCTCTTCAGGAACCTTCATCCTTTAGAGTGGAT...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCAACGTACTATCTCCTaGCATCAATGTACGAAGCAA +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMQRTIS*HQCTKQ
Trigger: TTGCTTCGTACATTGATGGCAGGAGATAGTACGTTG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCGTAAAAATAAGCTATaGCACTTCTGTCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMRKNKL*HFCLSC
Trigger: GCAGCTCAGACAGAAGTGGCATAGCTTATTTTTACG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCCAAGTAAACTATGCTaGTTTCCCAAAAGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDPSKLC*FPKRLD
Trigger: ATCGAGCCTTTTGGGAAAGCAGCATAGTTTACTTGG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCAGGGAAACACAAGTTaGTCTAATAGGAAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMQGNTS*SNRKRA
Trigger: GGCTCTTTTCCTATTAGAGCAACTTGTGTTTCCCTG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp CCATTTGATGCTTTACTATGGACATTGGCTCCCATACTGATTAACTGTTCTACTAGCTGCCAATCGTCTTaGTTGAGTACAAAATATACG +
Preference number: 4 (lower is better)
Translates to: PFDALLWTLAPILINCSTSCQSS*LSTKYT
Trigger: CGTATATTTTGTACTCAACCAAGACGATTGGCAGCT...AGTAGAACAGTTAATCAGTATGGGAGCCAATGTCCATAGTAAAGCATCAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp ATGAAGCATAAAGACTTGGTATCTATGTGTACTGTCAGCAAACCGCTTGTCATCAATTCCAACATATTCTaGAATCGGAGTCTACTGAAC +
Preference number: 4 (lower is better)
Translates to: MKHKDLVSMCTVSKPLVINSNIF*NRSLLN
Trigger: GTTCAGTAGACTCCGATTCCAGAATATGTTGGAATT...GATGACAAGCGGTTTGCTGACAGTACACATAGATACCAAGTCTTTATGCTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCATTTTACCAAGATGTaGTTCTACTGGCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDHFTKM*FYWQVS
Trigger: GCTGACTTGCCAGTAGAACCACATCTTGGTAAAATG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACTTGCAGGCTTTAGTTTaGAAGACGCACAGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNLQALV*KTHSKQ
Trigger: TTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAA...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACGTGACAGGAAATCTTTaGATTAGGCTCCTAACAGCA +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNVTGNL*IRLLTA
Trigger: TGCTGTTAGGAGCCTAATTCAAAGATTTCCTGTCAC...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTCATCTAAAAGGAACTaGGGAATCTGTGTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDSSKRN*GICVVF
Trigger: AAAGACCACACAGATTCCTCAGTTCCTTTTAGATGA...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGTGCTACTCTTCATTATaGAGTATCGAACAGGCATGT +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMCYSSL*SIEQAC
Trigger: ACATGCCTGTTCGATACTTCATAATGAAGAGTAGCA...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACGGTGCTCAGATGTTCTaGTATATTCAGGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNGAQMF*YIQAFL
Trigger: AAGAAAGGCCTGAATATATCAGAACATCTGAGCACC...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGTCTTTGGAGAAACCCTaGTTTCTAATCGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMSLEKP*FLIGSD
Trigger: ATCAGATCCGATTAGAAAGCAGGGTTTCTCCAAAGA...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACGTCACTGAAAGCTCCTaGAGTAAAACGTTTCCTACA +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNVTESS*SKTFPT
Trigger: TGTAGGAAACGTTTTACTGCAGGAGCTTTCAGTGAC...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCATCAGTACTCTTTCTaGAGTAGTACACTCATCAGA +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMHQYSF*SSTLIR
Trigger: TCTGATGAGTGTACTACTGCAGAAAGAGTACTGATG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp CCATTTGATGCTTTACTATGGACATTGGCTCCCATACTGATTAACTGTTCTACTAGGCTCTTTCAGTACTaGTCAAAGAAGAAGGAAATT +
Preference number: 4 (lower is better)
Translates to: PFDALLWTLAPILINCSTRLFQY*SKKKEI
Trigger: AATTTCCTTCTTCTTTGACCAGTACTGAAAGAGCCT...AGTAGAACAGTTAATCAGTATGGGAGCCAATGTCCATAGTAAAGCATCAAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGAGCTGCCAATCGTCTTaGTTGAGTACAAAATATACG +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMSCQSS*LSTKYT
Trigger: CGTATATTTTGTACTCAACCAAGACGATTGGCAGCT...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTCAGAGCTGTTGCACTaGTTTCACTATGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDSELLH*FHYVCN
Trigger: ATTACAGACATAGTGAAACCAGTGCAACAGCTCTGA...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGTTCTCTCTGTCCACGTaGACTAAATTAGGATACATG +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMFSLST*TKLGYM
Trigger: CATGTATCCTAATTTAGTCCACGTGGACAGAGAGAA...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGACTTGCCAATCTAGCTaGTCCACAGAATACCAATAT +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMTCQSS*STEYQY
Trigger: ATATTGGTATTCTGTGGACCAGCTAGATTGGCAAGT...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACAAAAGTTCCGGAGTCTaGAATTCCAACATATTCTGG +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNKSSGV*NSNIFW
Trigger: CCAGAATATGTTGGAATTTCAGACTCCGGAACTTTT...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTGTCATTCCATGGATTaGGTAAATGGTGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDCHSMD*VNGVQI
Trigger: AATTTGCACACCATTTACTCAATCCATGGAATGACA...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCTCAAGATTTTATGTTaGCCCATGATTTTTCACGTG +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMLKILC*PMIFHV
Trigger: CACGTGAAAAATCATGGGTCAACATAAAATCTTGAG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACATACCAAGTAAACTATaGTGCTTTCCCAAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNIPSKL*CFPKRL
Trigger: GAGCCTTTTGGGAAAGCAGCATAGTTTACTTGGTAT...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACTTTGATGCTTTACTATaGACATTGGCTCCCATACTG +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNFDALL*TLAPIL
Trigger: CAGTATGGGAGCCAATGTCCATAGTAAAGCATCAAA...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATAAGAAATATGAGACTTaGCACAAGCACGGATTTACA +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDKKYET*HKHGFT
Trigger: TGTAAATCCGTGCTTGTGCCAAGTCTCATATTTCTT...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR TCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACAGGCAAAATCATAGCTaGCTTTCTAAACTAATGCAC +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNRQNHS*LSKLMH
Trigger: GTGCATTAGTTTAGAAAGTCAGCTATGATTTTGCCT...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTCCCATGTATCCATTaGATCTATTGTCTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDFPCIH*IYCLKH
Trigger: ATGCTTAAGACAATAGATGCAATGGATACATGGGAA...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGATCAAGTTTCAAGGCTaGCAAATTAGCTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMIKFQG*QISCSF
Trigger: AAAACTACAGCTAATTTGGCAGCCTTGAAACTTGAT...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACAGGCTCTTTCAGTACTaGTCAAAGAAGAAGGAAATT +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNRLFQY*SKKKEI
Trigger: AATTTCCTTCTTCTTTGACCAGTACTGAAAGAGCCT...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGTTGACTCTTCTAAAATaGTGCTCAGATGTTCTGATA +
Preference number: 4 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMLTLLK*CSDVLI
Trigger: TATCAGAACATCTGAGCACCATTTTAGAAGAGTCAA...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR GCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACATGTATCATGAGAAGTaGCATCAAACCTGTCTATTT +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNMYHEK*HQTCLF
Trigger: AAATAGACAGGTTTGATGGCACTTCTCATGATACAT...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CCA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACATATTAGCTATTCTATaGGCTCTGGTCATTTCATCA +
Preference number: 4 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNILAIL*ALVISS
Trigger: TGATGAAATGACCAGAGCCCATAGAATAGCTAATAT...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS CCA 90 bp CGCGTTCCAGACCCGGGTGCCGCCGCTGAGGCCCGCCCCGGACGGTaGCCCGGGTCTTCCCTCCCTCTTCGGAGGCACCCCCATCACTCG +
Preference number: 5 (lower is better)
Translates to: RVPDPGAAAEARPGR*PGSSLPLRRHPHHS
Trigger: CGAGTGATGGGGGTGCCTCCGAAGAGGGAGGGAAGACCCGGGCCACCGTCCGGGGCGGGCCTCAGCGGCGGCACCCGGGTCTGGAACGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514720.1
CDS GCA 90 bp GCCAGGAGCCGGCTGCCGCGGGGAGACGCTGCTCGGCCTGGACATTaGCCTGAAGAGATGGTCTCTCCGCACGGGAGCGGCCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ARSRLPRGDAARPGH*PEEMVSPHGSGQAC
Trigger: GCAGGCCTGGCCGCTCCCGTGCGGAGAGACCATCTCTTCAGGGCAATGTCCAGGCCGAGCAGCGTCTCCCCGCGGCAGCCGGCTCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS TCA 90 bp GAGCCGGCTGCCGCGGGGAGACGCTGCTCGGCCTGGACATTGCCCTaGAGAGATGGTCTCTCCGCACGGGAGCGGCCAGGCCTGCTAGCT +
Preference number: 5 (lower is better)
Translates to: EPAAAGRRCSAWTLP*RDGLSARERPGLLA
Trigger: AGCTAGCAGGCCTGGCCGCTCCCGTGCGGAGAGACCATCTCTTCAGGGCAATGTCCAGGCCGAGCAGCGTCTCCCCGCGGCAGCCGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS TCA 90 bp GGTCTCTCCGCACGGGAGCGGCCAGGCCTGCTAGCTGACAGCCAATaGCAAAGACCGTGGGAATCCGGGGCCACTACCGGGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: GLSARERPGLLADSQ*QRPWESGATTGKLR
Trigger: CCGGAGCTTCCCGGTAGTGGCCCCGGATTCCCACGGTCTTTGTCATTGGCTGTCAGCTAGCAGGCCTGGCCGCTCCCGTGCGGAGAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS TCA 90 bp TCCGGGGCCACTACCGGGAAGCTCCGGAGACGGCCTGTGTTGGGCTaGGGTCACCAGAAAGGCCTCAGTCACCGCCACAGCAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: SGATTGKLRRRPVLG*GHQKGLSHRHSRSE
Trigger: TTCACTTCTGCTGTGGCGGTGACTGAGGCCTTTCTGGTGACCTCAGCCCAACACAGGCCGTCTCCGGAGCTTCCCGGTAGTGGCCCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS TCA 90 bp CTGAAGAGATGGTCTCTCCGCACGGGAGCGGCCAGGCCTGCTAGCTaGCAGCCAATGACAAAGACCGTGGGAATCCGGGGCCACTACCGG +
Preference number: 5 (lower is better)
Translates to: LKRWSLRTGAARPAS*QPMTKTVGIRGHYR
Trigger: CCGGTAGTGGCCCCGGATTCCCACGGTCTTTGTCATTGGCTGTCAGCTAGCAGGCCTGGCCGCTCCCGTGCGGAGAGACCATCTCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAATGTCCTTCAGCCCCTaGGCCCGGCCGCCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRMSFSP*ARPPPP
Trigger: TGGGGGCGGCGGCCGGGCCAAGGGGCTGAAGGACAT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp TTCTGGAATCGGAGTCTACTGAACAGACGAAAACAAATTCCAGGTCTACATCGCATGTCCTTCAGCCCCTaGGCCCGGCCGCCGCCCCCA +
Preference number: 5 (lower is better)
Translates to: FWNRSLLNRRKQIPGLHRMSFSP*ARPPPP
Trigger: TGGGGGCGGCGGCCGGGCCAAGGGGCTGAAGGACAT...GCGATGTAGACCTGGAATTTGTTTTCGTCTGTTCAGTAGACTCCGATTCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS TCA 90 bp CCATTTCTCTCTGGTCCCCGTATCGGAAGCGCTCCAGCGCGATATTaGCTGCGATCTTCACCTCCTCATCAATGCGAATGTCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: PFLSGPRIGSAPARY*LRSSPPHQCECPSA
Trigger: GGCTGAAGGACATTCGCATTGATGAGGAGGTGAAGATCGCAGTCAATATCGCGCTGGAGCGCTTCCGATACGGGGACCAGAGAGAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS GCA 90 bp TTCTCTCTGGTCCCCGTATCGGAAGCGCTCCAGCGCGATATTGACTaGGATCTTCACCTCCTCATCAATGCGAATGTCCTTCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: FSLVPVSEALQRDID*DLHLLINANVLQPL
Trigger: AAGGGGCTGAAGGACATTCGCATTGATGAGGAGGTGAAGATCGCAGTCAATATCGCGCTGGAGCGCTTCCGATACGGGGACCAGAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACATAGGCCTTGGCCTTaGGCCAATCCCAGATGGTTG +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRHRPWP*ANPRWL
Trigger: CAACCATCTGGGATTGGCCAAAGGCCAAGGCCTATG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAAGGCGGCACTTAGAATaGTGGCGCTTGCAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRRRHLE*WRLQAL
Trigger: TAAAGCCTGCAAGCGCCACAATTCTAAGTGCCGCCT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp ACTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGTTGCACTGGTTTCACTACTGTTCTACTTGACTaGCAAAGCCACGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: TCKATSCSNHQSCCTGFTTVLLD*QSHVLQ
Trigger: CTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAGT...AGTGAAACCAGTGCAACAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACAGGCATGTTTGGTCTaGGCGAAGGAGATTTTGAGC +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRQACLV*AKEILS
Trigger: GCTCAAAATCTCCTTCGCCAAGACCAAACATGCCTG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACTTGCAGGCTTTAGTTaGGAAGACGCACAGCAAGCA +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRLAGFS*EDAQQA
Trigger: TGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACAACCATCAGAGCTGTaGCACTGGTTTCACTATGTC +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRQPSEL*HWFHYV
Trigger: GACATAGTGAAACCAGTGCAACAGCTCTGATGGTTG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS CCA 90 bp GATGAGGCCAAAGGAAGCTCTTCTGAAGACATAGGCCTTGGCCTTTaGCCAATCCCAGATGGTTGTTGTAAACCTGCAGACTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: DEAKGSSSEDIGLGL*PIPDGCCKPADCSS
Trigger: TGAAGAACAGTCTGCAGGTTTACAACAACCATCTGGGATTGGCCAAAGGCCAAGGCCTATGTCTTCAGAAGAGCTTCCTTTGGCCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000512600.1
CDS GCA 90 bp GACCAAGGTTTAGATGGAGCTCTCATTCGGCGTAAAAATAAGCTATaGCACTTCTGTCTGAGCTGCAGCAATAAACTAGCTGCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: DQGLDGALIRRKNKL*HFCLSCSNKLAASG
Trigger: GCCAGAGGCAGCTAGTTTATTGCTGCAGCTCAGACAGAAGTGGCATAGCTTATTTTTACGCCGAATGAGAGCTCCATCTAAACCTTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp CCATTTGATGCTTTACTATGGACATTGGCTCCCATACTGATTAACTGTTCTACTGTGAAGCCTGCGCCATaGATATCACGGCCAGGCGAG +
Preference number: 5 (lower is better)
Translates to: PFDALLWTLAPILINCSTVKPAP*ISRPGE
Trigger: CTCGCCTGGCCGTGATATCAATGGCGCAGGCTTCAC...AGTAGAACAGTTAATCAGTATGGGAGCCAATGTCCATAGTAAAGCATCAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACTGATAACCAATTGTTaGACCAATCCTTTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRLITNC*TNPFPS
Trigger: AGACGGGAAAGGATTGGTCAAACAATTGGTTATCAG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS CCA 90 bp CTTCGTGCTTTTTGCCAGGCCTGGAATGCTCTGAGAAGTGCCATATaGTCACTGAAAGCTCCTGCAGTAAAACGTTTCCTACAAAGCATA +
Preference number: 5 (lower is better)
Translates to: LRAFCQAWNALRSAI*SLKAPAVKRFLQSI
Trigger: TATGCTTTGTAGGAAACGTTTTACTGCAGGAGCTTTCAGTGACCATATGGCACTTCTCAGAGCATTCCAGGCCTGGCAAAAAGCACGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATGTGAAGCCTGCGCCATaGATATCACGGCCAGGCGAG +
Preference number: 5 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDVKPAP*ISRPGE
Trigger: CTCGCCTGGCCGTGATATCAATGGCGCAGGCTTCAC...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp TCGCCCTGCCCTGCCTTTCCGCTGTATGGCACTAGCTTTGGAAATCCATACCATATGAAGCATAAAGACTaGGTATCTATGTGTACTGTC +
Preference number: 5 (lower is better)
Translates to: SPCPAFPLYGTSFGNPYHMKHKD*VSMCTV
Trigger: GACAGTACACATAGATACCAAGTCTTTATGCTTCAT...ATGGTATGGATTTCCAAAGCTAGTGCCATACAGCGGAAAGGCAGGGCAGGGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAACAAAGACAACATCATaGACTGTGATGCTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRTKTTS*TVMLVS
Trigger: TGAAACCAGCATCACAGTCAATGATGTTGTCTTTGT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGATTTTCCTACTATTATTaGACCTCCAAGATGAGGCCA +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRFSYYY*TSKMRP
Trigger: TGGCCTCATCTTGGAGGTCAAATAATAGTAGGAAAA...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS TCA 90 bp ATTCGGATTCTCCTCTTTTCACTGGAATCTGAGGTATGCCATTGTTaGGTCGCCCACTTGTCTTGCTCATTTCCCGGTTTTCAGCTTCAA +
Preference number: 5 (lower is better)
Translates to: IRILLFSLESEVCHC*VAHLSCSFPGFQLQ
Trigger: TTGAAGCTGAAAACCGGGAAATGAGCAAGACAAGTGGGCGACTCAACAATGGCATACCTCAGATTCCAGTGAAAAGAGGAGAATCCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000514720.1
ENST00000515883.5
CDS CCA 90 bp TTTTTCTCCTTTGGCCCTGTCAACACTAGATTCTCTCTGTCCACGTaGACTAAATTAGGATACATGCCTGCCACCAATGCAGCTTTAACG +
Preference number: 5 (lower is better)
Translates to: FFSFGPVNTRFSLST*TKLGYMPATNAALT
Trigger: CGTTAAAGCTGCATTGGTGGCAGGCATGTATCCTAATTTAGTCCACGTGGACAGAGAGAATCTAGTGTTGACAGGGCCAAAGGAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000506333.1
CDS-3UTR CAA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCGCTCCAGCGCGATATaGACTGCGATCTTCACCTCC +
Preference number: 5 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDRSSAI*TAIFTS
Trigger: GGAGGTGAAGATCGCAGTCAATATCGCGCTGGAGCG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACAGTTAGGTATCTATTaGCTCCCTTTCCTTTACTTT +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRQLGIY*LPFLYF
Trigger: AAAGTAAAGGAAAGGGAGCAAATAGATACCTAACTG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp TTAACTGTTCTACTTGACTTGCAAAGCCACGTCCTGCAGCAACCATCAGAGCTGGGATCTGATAACCAATaGTTTGACCAATCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: LTVLLDLQSHVLQQPSELGSDNQ*FDQSFP
Trigger: GGGAAAGGATTGGTCAAACAATTGGTTATCAGATCC...CAGCTCTGATGGTTGCTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp CACAGCGATAGCTGCCAATCGTCTTGGTTGAGTACAAAATATACGGCAGGGGATATGTCAGAAGTGTCTTaGGAGAAACCCTGCTTTCTA +
Preference number: 5 (lower is better)
Translates to: HSDSCQSSWLSTKYTAGDMSEVS*EKPCFL
Trigger: TAGAAAGCAGGGTTTCTCCAAAGACACTTCTGACAT...ATCCCCTGCCGTATATTTTGTACTCAACCAAGACGATTGGCAGCTATCGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGACAACTATGGCAGATATaGTATAGAAGATGCATGATC +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRQLWQI*YRRCMI
Trigger: GATCATGCATCTTCTATACAATATCTGCCATAGTTG...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGAATGAAGCATAAAGACTaGGTATCTATGTGTACTGTC +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRMKHKD*VSMCTV
Trigger: GACAGTACACATAGATACCAAGTCTTTATGCTTCAT...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp GCGCTTGCAGGCTTTAGTTTGGAAGACGCACAGCAAGCAAGCTACCAGTTGAGATGTATGGCACTAGCTTaGGAAATCCATACCATTTTT +
Preference number: 5 (lower is better)
Translates to: ALAGFSLEDAQQASYQLRCMALA*EIHTIF
Trigger: AAAAATGGTATGGATTTCCAAAGCTAGTGCCATACA...TCTCAACTGGTAGCTTGCTTGCTGTGCGTCTTCCAAACTAAAGCCTGCAAGCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS GCA 90 bp ATGGGCTCTGGTCATTTCATCATAAATAAGCCAATCTGTGGGCAGTaGCTTAATTGCTGCAGCTTGACCATTGGCTGGAGGAATCTTTTT +
Preference number: 5 (lower is better)
Translates to: MGSGHFIINKPICGQ*LNCCSLTIGWRNLF
Trigger: AAAAAGATTCCTCCAGCCAATGGTCAAGCTGCAGCAATTAAGGCACTGCCCACAGATTGGCTTATTTATGATGAAATGACCAGAGCCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000506333.1
CDS GCA 90 bp GACCAAGGTTTAGATGGAGCTCTCATTCGGCGTAAAAATAAGCTATaGCACTTCTGTCTGAGCTGCAGCAATAAACTAGCTGCCTGTAAT +
Preference number: 5 (lower is better)
Translates to: DQGLDGALIRRKNKL*HFCLSCSNKLAACN
Trigger: ATTACAGGCAGCTAGTTTATTGCTGCAGCTCAGACAGAAGTGGCATAGCTTATTTTTACGCCGAATGAGAGCTCCATCTAAACCTTGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512600.1
CDS-3UTR CAA 90 bp ACTTCATCCACGATAACATGTGTCACAGTCGACAACGTACTATCTCCTGCCATCTGCCAATCGTCTTGGTaGAGTACAAAATATACGGCA +
Preference number: 5 (lower is better)
Translates to: TSSTITCVTVDNVLSPAICQSSW*STKYTA
Trigger: TGCCGTATATTTTGTACTCAACCAAGACGATTGGCA...GATGGCAGGAGATAGTACGTTGTCGACTGTGACACATGTTATCGTGGATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp ACTTCATCCACGATAACATGTGTCACAGTCGACAACGTACTATCTCCTGCCATCCTGATAACCAATTGTTaGACCAATCCTTTCCCGTCT +
Preference number: 5 (lower is better)
Translates to: TSSTITCVTVDNVLSPAILITNC*TNPFPS
Trigger: AGACGGGAAAGGATTGGTCAAACAATTGGTTATCAG...GATGGCAGGAGATAGTACGTTGTCGACTGTGACACATGTTATCGTGGATGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS TCA 90 bp TGCCTAAAAGAATCAAATTCGGATTCTCCTCTTTTCACTGGAATCTaGGGTATGCCATTGTTGAGTCGCCCACTTGTCTTGCTCATTTCC +
Preference number: 5 (lower is better)
Translates to: CLKESNSDSPLFTGI*GMPLLSRPLVLLIS
Trigger: GGAAATGAGCAAGACAAGTGGGCGACTCAACAATGGCATACCTCAGATTCCAGTGAAAAGAGGAGAATCCGAATTTGATTCTTTTAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000514720.1
ENST00000515883.5
CDS-3UTR CAA 90 bp GCACCAGCATCACAACTATGGCAGATATTGTATAGAAGATGCATGATCAAATCCCAACCATCAGAGCTGTaGCACTGGTTTCACTATGTC +
Preference number: 5 (lower is better)
Translates to: APASQLWQILYRRCMIKSQPSEL*HWFHYV
Trigger: GACATAGTGAAACCAGTGCAACAGCTCTGATGGTTG...GGATTTGATCATGCATCTTCTATACAATATCTGCCATAGTTGTGATGCTGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp ACTGCACCAGCATCACAACTATGGCAGATATTGTATAGAAGATGCATGATCAAACTGTCAGCAAACCGCTaGTCATCAAACAGGATGCGA +
Preference number: 5 (lower is better)
Translates to: TAPASQLWQILYRRCMIKLSANR*SSNRMR
Trigger: TCGCATCCTGTTTGATGACAAGCGGTTTGCTGACAG...TTTGATCATGCATCTTCTATACAATATCTGCCATAGTTGTGATGCTGGTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp ACTTCATCCACGATAACATGTGTCACAGTCGACAACGTACTATCTCCTGCCATCACAAAGACAACATCATaGACTGTGATGCTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: TSSTITCVTVDNVLSPAITKTTS*TVMLVS
Trigger: TGAAACCAGCATCACAGTCAATGATGTTGTCTTTGT...GATGGCAGGAGATAGTACGTTGTCGACTGTGACACATGTTATCGTGGATGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS TCA 90 bp TCTAGCTGGTCCACAGAATACCAATATAGTGACAGGCGTCACTGCTaGACAACATCTAATATTAGCTATTCTATGGGCTCTGGTCATTTC +
Preference number: 5 (lower is better)
Translates to: SSWSTEYQYSDRRHC*TTSNISYSMGSGHF
Trigger: GAAATGACCAGAGCCCATAGAATAGCTAATATTAGATGTTGTTCAGCAGTGACGCCTGTCACTATATTGGTATTCTGTGGACCAGCTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000506333.1
CDS GCA 90 bp CATTTCATCATAAATAAGCCAATCTGTGGGCAGTGCCTTAATTGCTaGAGCTTGACCATTGGCTGGAGGAATCTTTTTATATTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: HFIINKPICGQCLNC*SLTIGWRNLFILRL
Trigger: CAGCCTCAATATAAAAAGATTCCTCCAGCCAATGGTCAAGCTGCAGCAATTAAGGCACTGCCCACAGATTGGCTTATTTATGATGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000506333.1
CDS GCA 90 bp GGTCATTTCATCATAAATAAGCCAATCTGTGGGCAGTGCCTTAATTaGTGCAGCTTGACCATTGGCTGGAGGAATCTTTTTATATTGAGG +
Preference number: 5 (lower is better)
Translates to: GHFIINKPICGQCLN*CSLTIGWRNLFILR
Trigger: CCTCAATATAAAAAGATTCCTCCAGCCAATGGTCAAGCTGCAGCAATTAAGGCACTGCCCACAGATTGGCTTATTTATGATGAAATGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000506333.1
CDS-3UTR CAA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGAGTCGCCCACTTGTCTaGCTCATTTCCCGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMSRPLV*LISRFS
Trigger: TGAAAACCGGGAAATGAGCAAGACAAGTGGGCGACT...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATACTGTTCTACTTGACTaGCAAAGCCACGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDTVLLD*QSHVLQ
Trigger: CTGCAGGACGTGGCTTTGCAAGTCAAGTAGAACAGT...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATCTGTCAGCAAACCGCTaGTCATCAAACAGGATGCGA +
Preference number: 5 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDLSANR*SSNRMR
Trigger: TCGCATCCTGTTTGATGACAAGCGGTTTGCTGACAG...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGTTGGCGAAGGAGATTTaGAGCCCTTTCCTGAGGATG +
Preference number: 5 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMLAKEI*SPFLRM
Trigger: CATCCTCAGGAAAGGGCTCAAAATCTCCTTCGCCAA...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS TCA 90 bp TGTAAGCAAAGTTCCTGTAATGGCATTCTCAAAAGTTCCGGAGTCTaGAATTCCAACATATTCTGGAATCGGAGTCTACTGAACAGACGA +
Preference number: 5 (lower is better)
Translates to: CKQSSCNGILKSSGV*NSNIFWNRSLLNRR
Trigger: TCGTCTGTTCAGTAGACTCCGATTCCAGAATATGTTGGAATTTCAGACTCCGGAACTTTTGAGAATGCCATTACAGGAACTTTGCTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS GCA 90 bp GCTCTCATTCGGCGTAAAAATAAGCTATGCCACTTCTGTCTGAGCTaGAGCAATAAACTAGCTGCCTGTAATAGTTCAAATAGATACAAG +
Preference number: 5 (lower is better)
Translates to: ALIRRKNKLCHFCLS*SNKLAACNSSNRYK
Trigger: CTTGTATCTATTTGAACTATTACAGGCAGCTAGTTTATTGCTGCAGCTCAGACAGAAGTGGCATAGCTTATTTTTACGCCGAATGAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512600.1
CDS-3UTR CAA 90 bp CTATCTCCTGCCATCAATGTACGAAGCAATACCCCATTAGTACAAAATGTCAGAATGCCATCCAGCCATTaGATGCTTTACTATGGACAT +
Preference number: 5 (lower is better)
Translates to: LSPAINVRSNTPLVQNVRMPSSH*MLYYGH
Trigger: ATGTCCATAGTAAAGCATCAAATGGCTGGATGGCAT...TCTGACATTTTGTACTAATGGGGTATTGCTTCGTACATTGATGGCAGGAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACATCACTTCGTGCTTTTaGCCAGGCCTGGAATGCTCT +
Preference number: 5 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNITSCF*PGLECS
Trigger: AGAGCATTCCAGGCCTGGCAAAAAGCACGAAGTGAT...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCTTAATTGCTGCAGCTaGACCATTGGCTGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMLNCCS*TIGWRN
Trigger: ATTCCTCCAGCCAATGGTCAAGCTGCAGCAATTAAG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATATCGAACAGGCATGTTaGGTCTTGGCGAAGGAGATT +
Preference number: 5 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDIEQAC*VLAKEI
Trigger: AATCTCCTTCGCCAAGACCAAACATGCCTGTTCGAT...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS TCA 90 bp TCAGTACCTCGTTTAGGATGTAAAATTCCTCTATCTTTGTACTTCTaGGGTGGGTGTAATGCTGGAGATGGAGATTTCATCAGTACTCTT +
Preference number: 5 (lower is better)
Translates to: SVPRLGCKIPLSLYF*GGCNAGDGDFISTL
Trigger: AAGAGTACTGATGAAATCTCCATCTCCAGCATTACACCCACCTCAGAAGTACAAAGATAGAGGAATTTTACATCCTAAACGAGGTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000512600.1
CDS-3UTR CAA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACACTGGGGCTAACAGCTaGGTATGTAAGCAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNTGANS*VCKQSS
Trigger: GGAACTTTGCTTACATACCAAGCTGTTAGCCCCAGT...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp GCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATTTTATGCTATCACTACTGTCATaGGGAATGCCATCCACTCTA +
Preference number: 5 (lower is better)
Translates to: APLYNAFPEKVEGSQDFMLSLLS*GMPSTL
Trigger: TAGAGTGGATGGCATTCCCAATGACAGTAGTGATAG...CATAAAATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATGGTAGCTTCATCAACTaGAGACCAAGGTTTAGATGG +
Preference number: 5 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDGSFIN*RPRFRW
Trigger: CCATCTAAACCTTGGTCTCAAGTTGATGAAGCTACC...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS TCA 90 bp GTGCTTAAAACAGCTATAATTGCTCTTATGGTAGCTTCATCAACTTaGGACCAAGGTTTAGATGGAGCTCTCATTCGGCGTAAAAATAAG +
Preference number: 5 (lower is better)
Translates to: VLKTAIIALMVASST*DQGLDGALIRRKNK
Trigger: CTTATTTTTACGCCGAATGAGAGCTCCATCTAAACCTTGGTCTCAAGTTGATGAAGCTACCATAAGAGCAATTATAGCTGTTTTAAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000512600.1
CDS-3UTR CAA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATGGATCTGATAACCAATaGTTTGACCAATCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDGSDNQ*FDQSFP
Trigger: GGGAAAGGATTGGTCAAACAATTGGTTATCAGATCC...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATATGTCAGAAGTGTCTTaGGAGAAACCCTGCTTTCTA +
Preference number: 5 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDMSEVS*EKPCFL
Trigger: TAGAAAGCAGGGTTTCTCCAAAGACACTTCTGACAT...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp AAACAGGATGCGATCTCTCAGTCCAACAATTTCGTCATATCCAGGCAGAAAAATTGTAAGTGTGGTTTGTaGTTTCTCTTCTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: KQDAISQSNNFVISRQKNCKCGL*FLFLLF
Trigger: AAACAGCAAGAAGAGAAACAACAAACCACACTTACA...ATTTTTCTGCCTGGATATGACGAAATTGTTGGACTGAGAGATCGCATCCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp ACTAATGCACCACTATATAATGCTTTCCCAGAGAAAGTAGAAGGTTCTCAAGATATGCCATCCAGCCATTaGATGCTTTACTATGGACAT +
Preference number: 5 (lower is better)
Translates to: TNAPLYNAFPEKVEGSQDMPSSH*MLYYGH
Trigger: ATGTCCATAGTAAAGCATCAAATGGCTGGATGGCAT...ATCTTGAGAACCTTCTACTTTCTCTGGGAAAGCATTATATAGTGGTGCATTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp CCATTTGATGCTTTACTATGGACATTGGCTCCCATACTGATTAACTGTTCTACTGTCACTTCCATTTGTTaGAACCAGAGAACTTTCATC +
Preference number: 5 (lower is better)
Translates to: PFDALLWTLAPILINCSTVTSIC*NQRTFI
Trigger: GATGAAAGTTCTCTGGTTCAAACAAATGGAAGTGAC...AGTAGAACAGTTAATCAGTATGGGAGCCAATGTCCATAGTAAAGCATCAAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp CTATCTCCTGCCATCAATGTACGAAGCAATACCCCATTAGTACAAAATGTCAGACAACTATGGCAGATATaGTATAGAAGATGCATGATC +
Preference number: 5 (lower is better)
Translates to: LSPAINVRSNTPLVQNVRQLWQI*YRRCMI
Trigger: GATCATGCATCTTCTATACAATATCTGCCATAGTTG...TCTGACATTTTGTACTAATGGGGTATTGCTTCGTACATTGATGGCAGGAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS-3UTR CAA 90 bp TCCTGCCATCAATGTACGAAGCAATACCCCATTAGTACAAAATGTCAGAAGTGTTGTATGGCACTAGCTTaGGAAATCCATACCATTTTT +
Preference number: 5 (lower is better)
Translates to: SCHQCTKQYPISTKCQKCCMALA*EIHTIF
Trigger: AAAAATGGTATGGATTTCCAAAGCTAGTGCCATACA...ACACTTCTGACATTTTGTACTAATGGGGTATTGCTTCGTACATTGATGGCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503857.5
CDS TCA 90 bp TCTGTTGAGAAATTTCAAGGTTTCTCAAATTGCTACTCTTCATTATaGAGTATCGAACAGGCATGTTTGGTCTTGGCGAAGGAGATTTTG +
Preference number: 5 (lower is better)
Translates to: SVEKFQGFSNCYSSL*SIEQACLVLAKEIL
Trigger: CAAAATCTCCTTCGCCAAGACCAAACATGCCTGTTCGATACTTCATAATGAAGAGTAGCAATTTGAGAAACCTTGAAATTTCTCAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000512600.1
CDS TCA 90 bp AGCTTCCGTTCATTACTAGGAGTTGTAGACCAGATACCCTTCTGTTaGGAAATTTCAAGGTTTCTCAAATTGCTACTCTTCATTATGAAG +
Preference number: 5 (lower is better)
Translates to: SFRSLLGVVDQIPFC*EISRFLKLLLFIMK
Trigger: CTTCATAATGAAGAGTAGCAATTTGAGAAACCTTGAAATTTCTCAACAGAAGGGTATCTGGTCTACAACTCCTAGTAATGAACGGAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000512600.1
CDS TCA 90 bp ACTTTCTTGTTGTCATTCCATGGATTGAGTAAATGGTGTGCAAATTaGAAGGGAAGGCTTTCTTTTCGTATCCACTCCACCTTAAATACT +
Preference number: 5 (lower is better)
Translates to: TFLLSFHGLSKWCAN*KGRLSFRIHSTLNT
Trigger: AGTATTTAAGGTGGAGTGGATACGAAAAGAAAGCCTTCCCTTTCAATTTGCACACCATTTACTCAATCCATGGAATGACAACAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000507567.1
ENST00000512600.1
CDS-3UTR CAA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACTGCCAATCGTCTTGGTaGAGTACAAAATATACGGCA +
Preference number: 5 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNCQSSW*STKYTA
Trigger: TGCCGTATATTTTGTACTCAACCAAGACGATTGGCA...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACGTCACTTCCATTTGTTaGAACCAGAGAACTTTCATC +
Preference number: 5 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNVTSIC*NQRTFI
Trigger: GATGAAAGTTCTCTGGTTCAAACAAATGGAAGTGAC...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACCCAGATACCCTTCTGTaGAGAAATTTCAAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNPDTLL*RNFKVS
Trigger: AGAAACCTTGAAATTTCTCAACAGAAGGGTATCTGG...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACCTTATCTGCACTTTCTaGTTGTCATTCCATGGATTG +
Preference number: 5 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNLICTF*LSFHGL
Trigger: CAATCCATGGAATGACAACAAGAAAGTGCAGATAAG...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACTGTAAGTGTGGTTTGTaGTTTCTCTTCTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNCKCGL*FLFLLF
Trigger: AAACAGCAAGAAGAGAAACAACAAACCACACTTACA...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS-3UTR CAA 90 bp AAGATGGTAGTTCTAAAGCAACACTCTAAAAGTGTTAAAAAGCCCATTCGTAACGAAATGTCCAGATCCTaGAACAGAAAATACCAAGTA +
Preference number: 5 (lower is better)
Translates to: KMVVLKQHSKSVKKPIRNEMSRS*NRKYQV
Trigger: TACTTGGTATTTTCTGTTCAAGGATCTGGACATTTC...GTTACGAATGGGCTTTTTAACACTTTTAGAGTGTTGCTTTAGAACTACCATCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS CCA 72 bp GACCCGGGTGCCGCCGCTGAGGCCCGCCCCGGACGGTaGCCCGGGTCTTCCCTCCCTCTTCGGAGGCACCCC +
Preference number: 6 (lower is better)
Translates to: DPGAAAEARPGR*PGSSLPLRRHP
Trigger: GGGGTGCCTCCGAAGAGGGAGGGAAGACCCGGGCCACCGTCCGGGGCGGGCCTCAGCGGCGGCACCCGGGTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514720.1
CDS TCA 72 bp GCCGCGGGGAGACGCTGCTCGGCCTGGACATTGCCCTaGAGAGATGGTCTCTCCGCACGGGAGCGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: AAGRRCSAWTLP*RDGLSARERPG
Trigger: GCCTGGCCGCTCCCGTGCGGAGAGACCATCTCTTCAGGGCAATGTCCAGGCCGAGCAGCGTCTCCCCGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS GCA 72 bp CGGCTGCCGCGGGGAGACGCTGCTCGGCCTGGACATTaGCCTGAAGAGATGGTCTCTCCGCACGGGAGCGGC +
Preference number: 6 (lower is better)
Translates to: RLPRGDAARPGH*PEEMVSPHGSG
Trigger: GCCGCTCCCGTGCGGAGAGACCATCTCTTCAGGGCAATGTCCAGGCCGAGCAGCGTCTCCCCGCGGCAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS CCA 72 bp TCACCTCCTCATCAATGCGAATGTCCTTCAGCCCCTTaGCCCGGCCGCCGCCCCCAGGGCCACAAGGCGAGG +
Preference number: 6 (lower is better)
Translates to: SPPHQCECPSAP*PGRRPQGHKAR
Trigger: CCTCGCCTTGTGGCCCTGGGGGCGGCGGCCGGGCCAAGGGGCTGAAGGACATTCGCATTGATGAGGAGGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS TCA 72 bp GCACGGGAGCGGCCAGGCCTGCTAGCTGACAGCCAATaGCAAAGACCGTGGGAATCCGGGGCCACTACCGGG +
Preference number: 6 (lower is better)
Translates to: ARERPGLLADSQ*QRPWESGATTG
Trigger: CCCGGTAGTGGCCCCGGATTCCCACGGTCTTTGTCATTGGCTGTCAGCTAGCAGGCCTGGCCGCTCCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS CCA 72 bp GAGACGCTGCTCGGCCTGGACATTGCCCTGAAGAGATaGTCTCTCCGCACGGGAGCGGCCAGGCCTGCTAGC +
Preference number: 6 (lower is better)
Translates to: ETLLGLDIALKR*SLRTGAARPAS
Trigger: GCTAGCAGGCCTGGCCGCTCCCGTGCGGAGAGACCATCTCTTCAGGGCAATGTCCAGGCCGAGCAGCGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS TCA 72 bp TGGTCTCTCCGCACGGGAGCGGCCAGGCCTGCTAGCTaGCAGCCAATGACAAAGACCGTGGGAATCCGGGGC +
Preference number: 6 (lower is better)
Translates to: WSLRTGAARPAS*QPMTKTVGIRG
Trigger: GCCCCGGATTCCCACGGTCTTTGTCATTGGCTGTCAGCTAGCAGGCCTGGCCGCTCCCGTGCGGAGAGACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS CAA 72 bp CTCTGGTCCCCGTATCGGAAGCGCTCCAGCGCGATATaGACTGCGATCTTCACCTCCTCATCAATGCGAATG +
Preference number: 6 (lower is better)
Translates to: LWSPYRKRSSAI*TAIFTSSSMRM
Trigger: CATTCGCATTGATGAGGAGGTGAAGATCGCAGTCAATATCGCGCTGGAGCGCTTCCGATACGGGGACCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS TCA 72 bp TCTGGTCCCCGTATCGGAAGCGCTCCAGCGCGATATTaGCTGCGATCTTCACCTCCTCATCAATGCGAATGT +
Preference number: 6 (lower is better)
Translates to: SGPRIGSAPARY*LRSSPPHQCEC
Trigger: ACATTCGCATTGATGAGGAGGTGAAGATCGCAGTCAATATCGCGCTGGAGCGCTTCCGATACGGGGACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS GCA 72 bp GTCCCCGTATCGGAAGCGCTCCAGCGCGATATTGACTaGGATCTTCACCTCCTCATCAATGCGAATGTCCTT +
Preference number: 6 (lower is better)
Translates to: VPVSEALQRDID*DLHLLINANVL
Trigger: AAGGACATTCGCATTGATGAGGAGGTGAAGATCGCAGTCAATATCGCGCTGGAGCGCTTCCGATACGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS CAA 90 bp TCCATTTCTCTCTGGTCCCCGTATCGGAAGCGCTCCAGCGCGATATaGACTGCGATCTTCACCTCCTCATCAATGCGAATGTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SISLWSPYRKRSSAI*TAIFTSSSMRMSFS
Trigger: GCTGAAGGACATTCGCATTGATGAGGAGGTGAAGATCGCAGTCAATATCGCGCTGGAGCGCTTCCGATACGGGGACCAGAGAGAAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000503857.5
ENST00000515883.5
CDS GCA 72 bp CGGCGTAAAAATAAGCTATGCCACTTCTGTCTGAGCTaGAGCAATAAACTAGCTGCCTCTGGCTCCAGTGTG +
Preference number: 6 (lower is better)
Translates to: RRKNKLCHFCLS*SNKLAASGSSV
Trigger: CACACTGGAGCCAGAGGCAGCTAGTTTATTGCTGCAGCTCAGACAGAAGTGGCATAGCTTATTTTTACGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS CCA 72 bp AAAGGAAGCTCTTCTGAAGACATAGGCCTTGGCCTTTaGCCAATCCCAGATGGTTGTTGTAAACCTGCAGAC +
Preference number: 6 (lower is better)
Translates to: KGSSSEDIGLGL*PIPDGCCKPAD
Trigger: GTCTGCAGGTTTACAACAACCATCTGGGATTGGCCAAAGGCCAAGGCCTATGTCTTCAGAAGAGCTTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000512600.1
CDS TCA 72 bp CTCCTCTTTTCACTGGAATCTGAGGTATGCCATTGTTaGGTCGCCCACTTGTCTTGCTCATTTCCCGGTTTT +
Preference number: 6 (lower is better)
Translates to: LLFSLESEVCHC*VAHLSCSFPGF
Trigger: AAAACCGGGAAATGAGCAAGACAAGTGGGCGACTCAACAATGGCATACCTCAGATTCCAGTGAAAAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000514720.1
ENST00000515883.5
CDS TCA 72 bp TTAAATACTCCTCCTAGTCCAGCAGAGCCCCAGTCCTaGCTCTTTTCCCTTCCAATCTCAGAAGACATCCTA +
Preference number: 6 (lower is better)
Translates to: LNTPPSPAEPQS*LFSLPISEDIL
Trigger: TAGGATGTCTTCTGAGATTGGAAGGGAAAAGAGTCAGGACTGGGGCTCTGCTGGACTAGGAGGAGTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000507567.1
ENST00000512600.1
CDS GCA 72 bp GGTCATTTCATCATAAATAAGCCAATCTGTGGGCAGTaGCTTAATTGCTGCAGCTTGACCATTGGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: GHFIINKPICGQ*LNCCSLTIGWR
Trigger: CCTCCAGCCAATGGTCAAGCTGCAGCAATTAAGGCACTGCCCACAGATTGGCTTATTTATGATGAAATGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000506333.1
CDS CCA 72 bp TTTTGCCAGGCCTGGAATGCTCTGAGAAGTGCCATATaGTCACTGAAAGCTCCTGCAGTAAAACGTTTCCTA +
Preference number: 6 (lower is better)
Translates to: FCQAWNALRSAI*SLKAPAVKRFL
Trigger: TAGGAAACGTTTTACTGCAGGAGCTTTCAGTGACCATATGGCACTTCTCAGAGCATTCCAGGCCTGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS CCA 72 bp TTTGGCCCTGTCAACACTAGATTCTCTCTGTCCACGTaGACTAAATTAGGATACATGCCTGCCACCAATGCA +
Preference number: 6 (lower is better)
Translates to: FGPVNTRFSLST*TKLGYMPATNA
Trigger: TGCATTGGTGGCAGGCATGTATCCTAATTTAGTCCACGTGGACAGAGAGAATCTAGTGTTGACAGGGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000506333.1
CDS CCA 72 bp AGCAATAAACTAGCTGCCTCTGGCTCCAGTGTGAAATaGAGCCACTCATCAAGTTTCAAGGCTGCCAAATTA +
Preference number: 6 (lower is better)
Translates to: SNKLAASGSSVK*SHSSSFKAAKL
Trigger: TAATTTGGCAGCCTTGAAACTTGATGAGTGGCTCCATTTCACACTGGAGCCAGAGGCAGCTAGTTTATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS CAA 72 bp AAGCCAATCTGTGGGCAGTGCCTTAATTGCTGCAGCTaGACCATTGGCTGGAGGAATCTTTTTATATTGAGG +
Preference number: 6 (lower is better)
Translates to: KPICGQCLNCCS*TIGWRNLFILR
Trigger: CCTCAATATAAAAAGATTCCTCCAGCCAATGGTCAAGCTGCAGCAATTAAGGCACTGCCCACAGATTGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000506333.1
CDS TCA 72 bp TTACCAAGATGTGGTTCTACTGGCAAGTCAGCCAAATaGTACCCAAGTTCAGTCAGATCTTCCCATGTATCC +
Preference number: 6 (lower is better)
Translates to: LPRCGSTGKSAK*YPSSVRSSHVS
Trigger: GGATACATGGGAAGATCTGACTGAACTTGGGTATCATTTGGCTGACTTGCCAGTAGAACCACATCTTGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS CCA 72 bp AGCACACAAGACCATTTTACCAAGATGTGGTTCTACTaGCAAGTCAGCCAAATGATACCCAAGTTCAGTCAG +
Preference number: 6 (lower is better)
Translates to: STQDHFTKMWFY*QVSQMIPKFSQ
Trigger: CTGACTGAACTTGGGTATCATTTGGCTGACTTGCCAGTAGAACCACATCTTGGTAAAATGGTCTTGTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS TCA 72 bp CCACCTCGTGCTCTAACAAAACCTGATGCTCTAAGTTaGCCAAGCAACTGTGTTCTCATGCCTATGATTATT +
Preference number: 6 (lower is better)
Translates to: PPRALTKPDALS*PSNCVLMPMII
Trigger: AATAATCATAGGCATGAGAACACAGTTGCTTGGTCAACTTAGAGCATCAGGTTTTGTTAGAGCACGAGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000506333.1
CDS GCA 72 bp CAGTGTGAAATGGAGCCACTCATCAAGTTTCAAGGCTaGCAAATTAGCTGTAGTTTTGTCCTCCATTTCACT +
Preference number: 6 (lower is better)
Translates to: QCEMEPLIKFQG*QISCSFVLHFT
Trigger: AGTGAAATGGAGGACAAAACTACAGCTAATTTGGCAGCCTTGAAACTTGATGAGTGGCTCCATTTCACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS GCA 72 bp TTAGATGGAGCTCTCATTCGGCGTAAAAATAAGCTATaGCACTTCTGTCTGAGCTGCAGCAATAAACTAGCT +
Preference number: 6 (lower is better)
Translates to: LDGALIRRKNKL*HFCLSCSNKLA
Trigger: AGCTAGTTTATTGCTGCAGCTCAGACAGAAGTGGCATAGCTTATTTTTACGCCGAATGAGAGCTCCATCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000512600.1
CDS CAA 72 bp AACAGCTATAATTGCTCTTATGGTAGCTTCATCAACTaGAGACCAAGGTTTAGATGGAGCTCTCATTCGGCG +
Preference number: 6 (lower is better)
Translates to: NSYNCSYGSFIN*RPRFRWSSHSA
Trigger: CGCCGAATGAGAGCTCCATCTAAACCTTGGTCTCAAGTTGATGAAGCTACCATAAGAGCAATTATAGCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000512600.1
CDS CAA 72 bp TCAAATGTATATCCTCTGGAGGAGATCTTACCTGTTTaGTACACTTCTAGATCCCTCACACCAAGAACTGGC +
Preference number: 6 (lower is better)
Translates to: SNVYPLEEILPV*YTSRSLTPRTG
Trigger: GCCAGTTCTTGGTGTGAGGGATCTAGAAGTGTACAAAACAGGTAAGATCTCCTCCAGAGGATATACATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512600.1
CDS TCA 72 bp AGTTCCTGTAATGGCATTCTCAAAAGTTCCGGAGTCTaGAATTCCAACATATTCTGGAATCGGAGTCTACTG +
Preference number: 6 (lower is better)
Translates to: SSCNGILKSSGV*NSNIFWNRSLL
Trigger: CAGTAGACTCCGATTCCAGAATATGTTGGAATTTCAGACTCCGGAACTTTTGAGAATGCCATTACAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS TCA 72 bp TTGTCATTCCATGGATTGAGTAAATGGTGTGCAAATTaGAAGGGAAGGCTTTCTTTTCGTATCCACTCCACC +
Preference number: 6 (lower is better)
Translates to: LSFHGLSKWCAN*KGRLSFRIHST
Trigger: GGTGGAGTGGATACGAAAAGAAAGCCTTCCCTTTCAATTTGCACACCATTTACTCAATCCATGGAATGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000507567.1
ENST00000512600.1
CDS TCA 72 bp ATCCCTCACACCAAGAACTGGCATTCAATGTGTCACTaGGTGAAGTACTTTTCTATAGGAATGCTAATCAGC +
Preference number: 6 (lower is better)
Translates to: IPHTKNWHSMCH*VKYFSIGMLIS
Trigger: GCTGATTAGCATTCCTATAGAAAAGTACTTCACTCAGTGACACATTGAATGCCAGTTCTTGGTGTGAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512600.1
CDS CAA 72 bp TATACCTGCCCATCCCTGCTTATCTGCACTTTCTTGTaGTCATTCCATGGATTGAGTAAATGGTGTGCAAAT +
Preference number: 6 (lower is better)
Translates to: YTCPSLLICTFL*SFHGLSKWCAN
Trigger: ATTTGCACACCATTTACTCAATCCATGGAATGACAACAAGAAAGTGCAGATAAGCAGGGATGGGCAGGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507567.1
ENST00000512600.1
CDS TCA 72 bp TCCACAGAATACCAATATAGTGACAGGCGTCACTGCTaGACAACATCTAATATTAGCTATTCTATGGGCTCT +
Preference number: 6 (lower is better)
Translates to: STEYQYSDRRHC*TTSNISYSMGS
Trigger: AGAGCCCATAGAATAGCTAATATTAGATGTTGTTCAGCAGTGACGCCTGTCACTATATTGGTATTCTGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000506333.1
CDS GCA 72 bp AAAATGCCATTGTATACCTGCCCATCCCTGCTTATCTaGACTTTCTTGTTGTCATTCCATGGATTGAGTAAA +
Preference number: 6 (lower is better)
Translates to: KMPLYTCPSLLI*TFLLSFHGLSK
Trigger: TTTACTCAATCCATGGAATGACAACAAGAAAGTGCAGATAAGCAGGGATGGGCAGGTATACAATGGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507567.1
ENST00000512600.1
CDS TCA 72 bp TGCTTATCTGCACTTTCTTGTTGTCATTCCATGGATTaGGTAAATGGTGTGCAAATTGAAAGGGAAGGCTTT +
Preference number: 6 (lower is better)
Translates to: CLSALSCCHSMD*VNGVQIEREGF
Trigger: AAAGCCTTCCCTTTCAATTTGCACACCATTTACTCAATCCATGGAATGACAACAAGAAAGTGCAGATAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000507567.1
ENST00000512600.1
CDS CAA 72 bp AGACATCCTAGAAAATCCCTGGAAATGTCCAGATCCTaGAACAGAAAATACCAAGTAAACTATGCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: RHPRKSLEMSRS*NRKYQVNYAAF
Trigger: GAAAGCAGCATAGTTTACTTGGTATTTTCTGTTCAAGGATCTGGACATTTCCAGGGATTTTCTAGGATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161863.9
ENST00000507567.1
ENST00000512600.1
CDS TCA 72 bp AAATTTCAAGGTTTCTCAAATTGCTACTCTTCATTATaGAGTATCGAACAGGCATGTTTGGTCTTGGCGAAG +
Preference number: 6 (lower is better)
Translates to: KFQGFSNCYSSL*SIEQACLVLAK
Trigger: CTTCGCCAAGACCAAACATGCCTGTTCGATACTTCATAATGAAGAGTAGCAATTTGAGAAACCTTGAAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000512600.1
CDS GCA 72 bp ATACCCAAGTTCAGTCAGATCTTCCCATGTATCCATTaGATCTATTGTCTTAAGCATTTGTACAGCATTTCT +
Preference number: 6 (lower is better)
Translates to: IPKFSQIFPCIH*IYCLKHLYSIS
Trigger: AGAAATGCTGTACAAATGCTTAAGACAATAGATGCAATGGATACATGGGAAGATCTGACTGAACTTGGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000161863.9
CDS CCA 72 bp TATTATATGCCTCCCCTCAATCAAATGTATATCCTCTaGAGGAGATCTTACCTGTTTTGTACACTTCTAGAT +
Preference number: 6 (lower is better)
Translates to: YYMPPLNQMYIL*RRSYLFCTLLD
Trigger: ATCTAGAAGTGTACAAAACAGGTAAGATCTCCTCCAGAGGATATACATTTGATTGAGGGGAGGCATATAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512600.1
CDS CCA 72 bp TTTGTTTTTCATAGAGATTCAGCAAAAGCACTCAGCTaGAACTTCCAAAGGTTTACTGTGAAACCTAGCATA +
Preference number: 6 (lower is better)
Translates to: FVFHRDSAKALS*NFQRFTVKPSI
Trigger: TATGCTAGGTTTCACAGTAAACCTTTGGAAGTTCCAGCTGAGTGCTTTTGCTGAATCTCTATGAAAAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512600.1
CDS CAA 72 bp TTCATTACTAGGAGTTGTAGACCAGATACCCTTCTGTaGAGAAATTTCAAGGTTTCTCAAATTGCTACTCTT +
Preference number: 6 (lower is better)
Translates to: FITRSCRPDTLL*RNFKVSQIATL
Trigger: AAGAGTAGCAATTTGAGAAACCTTGAAATTTCTCAACAGAAGGGTATCTGGTCTACAACTCCTAGTAATGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161863.9
ENST00000512600.1