RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for YPEL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000166793

Ensembl transcript IDs: ENST00000300022.8, ENST00000524592.1, ENST00000524669.5, ENST00000528797.5, ENST00000529776.5, ENST00000531442.1, ENST00000532314.5, ENST00000533025.1, ENST00000534711.5, ENST00000534810.3

Found 497 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCCCAGGAGCAGTGACTGGGCCTCAGAGAAAGCCCATAAAGACTaGTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGC +
Preference number: 1 (lower is better)
Translates to: GPRSSDWASEKAHKD*LLWKQPTRGCSASS
Trigger: GCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCCAGTCACTGCTCCTGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR CCA 90 bp AGCAGTGACTGGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTaGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCCCCAC +
Preference number: 1 (lower is better)
Translates to: SSDWASEKAHKDCLL*KQPTRGCSASSCPH
Trigger: GTGGGGACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCCAGTCACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR TCA 90 bp AAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTaGGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAA +
Preference number: 1 (lower is better)
Translates to: KEVEQKRIPPTILSA*VYALPSLPCSGSWE
Trigger: TTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR GCA 90 bp GGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATaGCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGA +
Preference number: 1 (lower is better)
Translates to: GAKTDSSHNPLCLSL*PAIASMFRILGTER
Trigger: TCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR GCA 90 bp TCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTaGCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTTG +
Preference number: 1 (lower is better)
Translates to: SKRGGAKTDSSHNPL*LSLCPAIASMFRIL
Trigger: CAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR CCA 90 bp TTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTaGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCT +
Preference number: 1 (lower is better)
Translates to: LPCDPRFVLCSLKKR*SKNGFLPQSSLPES
Trigger: AGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR TCA 90 bp AGGGGTAGGAAACTTCATCCTCAGAGACTCTGGTCTCCTGGTGTCTaGGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCTG +
Preference number: 1 (lower is better)
Translates to: RGRKLHPQRLWSPGV*DQNFTPTQVFSHLL
Trigger: CAGCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAGACCAGAGTCTCTGAGGATGAAGTTTCCTACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR TCA 90 bp TTCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATaGTCTACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCA +
Preference number: 1 (lower is better)
Translates to: FTPTQVFSHLLFCGP*STCPVTQGLSSVHS
Trigger: TGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR CCA 90 bp CCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTaGTCCATGATCTACTTGCCCTGTGACCCAAGGTTTGTCCTCTGT +
Preference number: 1 (lower is better)
Translates to: PEFHSNPSLFSSAVL*SMIYLPCDPRFVLC
Trigger: ACAGAGGACAAACCTTGGGTCACAGGGCAAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp CATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCTGCTTGGCAGGGCCGTaGGGAGGGAGGGGCATGCGG +
Preference number: 2 (lower is better)
Translates to: HTKVSFAGGSHGKDWPRSCLAGP*GGRGMR
Trigger: CCGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCA...GCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp CACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTGCTTGGCAGGGCCGTaGGGAGGGAGGGGCATGCGG +
Preference number: 2 (lower is better)
Translates to: HNPLCLSLCPAIASMFRICLAGP*GGRGMR
Trigger: CCGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCA...GATCCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp CCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCTGCTTGGCAGGGCCGTaGGGAGGGAGGGGCATGCGG +
Preference number: 2 (lower is better)
Translates to: PAIASMFRILGTERPTTICLAGP*GGRGMR
Trigger: CCGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCA...GATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp TCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCATCCCCTCCAGGGGACTaGGTCCCAGGAGCAGTGACT +
Preference number: 2 (lower is better)
Translates to: SFAGGSHGKDWPRSTDFPSPPGD*VPGAVT
Trigger: AGTCACTGCTCCTGGGACCCAGTCCCCTGGAGGGGA...TGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp CATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACCATGCTGGTATAGACTaGTTGGCAGGGCCGTGGGGA +
Preference number: 2 (lower is better)
Translates to: HSLVAATGKTGPVALIFHHAGID*LAGPWG
Trigger: TCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATG...GTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGCATGCTGGTATAGACTaGTTGGCAGGGCCGTGGGGA +
Preference number: 2 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGEHAGID*LAGPWG
Trigger: TCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATG...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp TTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCTACATGCTTGGCAGGGCCGTaGGGAGGGAGGGGCATGCGG +
Preference number: 2 (lower is better)
Translates to: FPRAWDLSFPCTQVLFPTCLAGP*GGRGMR
Trigger: CCGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCA...TGTAGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGGGGCAGTACTCATGCTaGTATAGACTGCTTGGCAGG +
Preference number: 2 (lower is better)
Translates to: YSCWYRLLGRAVGREGHAGQYSC*YRLLGR
Trigger: CCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp TCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACCCAGGAGCAGTGACTaGGCCTCAGAGAAAGCCCAT +
Preference number: 2 (lower is better)
Translates to: SFAGGSHGKDWPRSTDFPPRSSD*ASEKAH
Trigger: ATGGGCTTTCTCTGAGGCCCAGTCACTGCTCCTGGG...TGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGGTGGGGCAGTACTCATaGTGGTATAGACTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGEVGQYS*WYRLLG
Trigger: GCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp GACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCCCGAGACTCTGGTCTCCTaGTGTCTGAGACCAGAATTT +
Preference number: 2 (lower is better)
Translates to: DCLLWKQPTRGCSASSCPETLVS*CLRPEF
Trigger: AAATTCTGGTCTCAGACACCAGGAGACCAGAGTCTC...GGGACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR TCA 90 bp AAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCTGGTCTCCTGGTGTCTaGGACCAGAATTTCACTCCA +
Preference number: 2 (lower is better)
Translates to: KTAYSGSSRLGAVPRAAVWSPGV*DQNFTP
Trigger: TGGAGTGAAATTCTGGTCTCAGACACCAGGAGACCA...GACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR TCA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGCCAGGGCCTGGGATTTaGGTTTTCCCTGCACTCAAG +
Preference number: 2 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGPGPGI*VFPALK
Trigger: CTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGG...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp AACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCTCCCACAATCCTCTCTaGCTGAGTCTATGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: NGFLPQSSLPESMPCHRFSHNPL*LSLCPA
Trigger: GGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA...GAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp TCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGGTGGGGCAGTACTCATaGTGGTATAGACTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: SHNPLCLSLCPAIASMFRVGQYS*WYRLLG
Trigger: GCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC...CCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR CAA 90 bp CTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTaGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCAGTTCTGT +
Preference number: 2 (lower is better)
Translates to: LCLSLCPAIASMFRI*GTERPTTIPFPQFC
Trigger: ACAGAACTGGGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR TCA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCACAATCCTCTCTGCCTaGGTCTATGCCCTGCCATCG +
Preference number: 2 (lower is better)
Translates to: ASMFRILGTERPTTIPFPTILSA*VYALPS
Trigger: CGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGT...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp AAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCAGCCCAGTGTGGTTTTaGAGCTCTCACAGAAAATGT +
Preference number: 2 (lower is better)
Translates to: KTAYSGSSRLGAVPRAAVSPVWF*SSHRKC
Trigger: ACATTTTCTGTGAGAGCTGCAAAACCACACTGGGCT...GACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532314.5
3UTR-3UTR GCA 90 bp GTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATAGGAAGGGCACACCCTaGCTGAGCCCCTCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: VTQGLSSVHSKRGGAKTDRKGTP*LSPSVP
Trigger: TGGGACTGAGGGGCTCAGGCAGGGTGTGCCCTTCCT...ATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532314.5
3UTR-3UTR CCA 90 bp CATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCAGTTATGTCAGCTACCGAGTaGAGCCCCGTGAGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: HVQDLGNRKTHNHPFPPVMSATE*SPVSKR
Trigger: CCTCTTGCTCACGGGGCTCCACTCGGTAGCTGACAT...AACTGGGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532314.5
3UTR-3UTR TCA 90 bp ATCTACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGTTCTGTCTCTCCCTaGCTGCTGCCCACTCCTGAG +
Preference number: 2 (lower is better)
Translates to: IYLPCDPRFVLCSLKKRWSSVSP*LLPTPE
Trigger: CTCAGGAGTGGGCAGCAGTCAGGGAGAGACAGAACT...CCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGTAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR TCA 90 bp TTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCAGTTCTGTCTCTCCCTaGCTGCTGCCCACTCCTGAG +
Preference number: 2 (lower is better)
Translates to: FTQKEVEQKRIPPTILSASSVSP*LLPTPE
Trigger: CTCAGGAGTGGGCAGCAGTCAGGGAGAGACAGAACT...GGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCCATGCTGGTATAGACTaGTTGGCAGGGCCGTGGGGA +
Preference number: 2 (lower is better)
Translates to: LLVSETRISLQPKSFLICHAGID*LAGPWG
Trigger: TCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATG...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp CACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCCCCTGTTCTAAAGGGTaGCTGGTAGTGGATATGGTG +
Preference number: 2 (lower is better)
Translates to: HNPLCLSLCPAIASMFRIPCSKG*LVVDMV
Trigger: CACCATATCCACTACCAGGCACCCTTTAGAACAGGG...GATCCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp CACCCCACCCAATGGCAAAAGTTAGATACTCGAAAGTGCCTCTTCAGTGCCAAGTCTCTCCCTGACTGCTaGCCACTCCTGAGCCTTAAC +
Preference number: 2 (lower is better)
Translates to: HPTQWQKLDTRKCLFSAKSLPDC*PLLSLN
Trigger: GTTAAGGCTCAGGAGTGGGCAGCAGTCAGGGAGAGA...CTTGGCACTGAAGAGGCACTTTCGAGTATCTAACTTTTGCCATTGGGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp AAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCGATTTGAGTTTTCCCTaGACTCAAGTCCTTTTCCCT +
Preference number: 2 (lower is better)
Translates to: KTAYSGSSRLGAVPRAAVDLSFP*TQVLFP
Trigger: AGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATC...GACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGAAAAGTTTCATTCGCTaGTGGCAGCCACGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGKSFIR*WQPRER
Trigger: TCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTT...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR TCA 90 bp TTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCAGTTCTGTCTCTCCCTaGCTGCTGCCCACTCCTGAG +
Preference number: 2 (lower is better)
Translates to: LLFPRAWDLSFPCTQVLFSSVSP*LLPTPE
Trigger: CTCAGGAGTGGGCAGCAGTCAGGGAGAGACAGAACT...GAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp GTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACACATGCTGGTATAGACTaGTTGGCAGGGCCGTGGGGA +
Preference number: 2 (lower is better)
Translates to: VCPLFTQKEVEQKRIPPTHAGID*LAGPWG
Trigger: TCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATG...TGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp TTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCTACACCTGAGTCTATGCCCTaGCATCGCTTCCATGTTCAG +
Preference number: 2 (lower is better)
Translates to: FPRAWDLSFPCTQVLFPTPESMP*HRFHVQ
Trigger: CTGAACATGGAAGCGATGGCAGGGCATAGACTCAGG...TGTAGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp CTACAAATAGGGGTAGGAAACTTCATCCTCAGAGACTCTGGTCTCCTGGTGTCTTCCCACAATCCTCTCTaGCTGAGTCTATGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: LQIGVGNFILRDSGLLVSSHNPL*LSLCPA
Trigger: GGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA...AGACACCAGGAGACCAGAGTCTCTGAGGATGAAGTTTCCTACCCCTATTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp TCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCAGATTTGAGTTTTCCCTaGACTCAAGTCCTTTTCCCT +
Preference number: 2 (lower is better)
Translates to: SFAGGSHGKDWPRSTDFPDLSFP*TQVLFP
Trigger: AGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATC...TGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp GACTGGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTGAGACTCTGGTCTCCTaGTGTCTGAGACCAGAATTT +
Preference number: 2 (lower is better)
Translates to: DWASEKAHKDCLLWKQPTETLVS*CLRPEF
Trigger: AAATTCTGGTCTCAGACACCAGGAGACCAGAGTCTC...AGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR TCA 90 bp TGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAACTGTTCTGTGGTCCATaGTCTACTTGCCCTGTGACC +
Preference number: 2 (lower is better)
Translates to: CPVTQGLSSVHSKRGGAKLFCGP*STCPVT
Trigger: GGTCACAGGGCAAGTAGATCATGGACCACAGAACAG...TTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTCATGCTGGTATAGACTaGTTGGCAGGGCCGTGGGGA +
Preference number: 2 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLHAGID*LAGPWG
Trigger: TCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATG...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp CTACAAATAGGGGTAGGAAACTTCATCCTCAGAGACTCTGGTCTCCTGGTGTCTGTGGGGCAGTACTCATaGTGGTATAGACTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: LQIGVGNFILRDSGLLVSVGQYS*WYRLLG
Trigger: GCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC...AGACACCAGGAGACCAGAGTCTCTGAGGATGAAGTTTCCTACCCCTATTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp TTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCTACACCCTGTTCTAAAGGGTaGCTGGTAGTGGATATGGTG +
Preference number: 2 (lower is better)
Translates to: FPRAWDLSFPCTQVLFPTPCSKG*LVVDMV
Trigger: CACCATATCCACTACCAGGCACCCTTTAGAACAGGG...TGTAGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp GTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCTCTCCCTGACTGCTaGCCACTCCTGAGCCTTAAC +
Preference number: 2 (lower is better)
Translates to: VTQGLSSVHSKRGGAKTDSLPDC*PLLSLN
Trigger: GTTAAGGCTCAGGAGTGGGCAGCAGTCAGGGAGAGA...ATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp GGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTCTCGTCTCAAAAGCTTaGTCATATTTCCAGCCCAGT +
Preference number: 2 (lower is better)
Translates to: GGAKTDSSHNPLCLSLCPLVSKA*SYFQPS
Trigger: ACTGGGCTGGAAATATGAGCAAGCTTTTGAGACGAG...AGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532314.5
3UTR-3UTR TCA 90 bp AAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAAGTTCTGTCTCTCCCTaGCTGCTGCCCACTCCTGAG +
Preference number: 2 (lower is better)
Translates to: KHFMYHTKVSFAGGSHGKSSVSP*LLPTPE
Trigger: CTCAGGAGTGGGCAGCAGTCAGGGAGAGACAGAACT...TTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR TCA 90 bp GTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACACTGTTCTGTGGTCCATaGTCTACTTGCCCTGTGACC +
Preference number: 2 (lower is better)
Translates to: VCPLFTQKEVEQKRIPPTLFCGP*STCPVT
Trigger: GGTCACAGGGCAAGTAGATCATGGACCACAGAACAG...TGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR TCA 90 bp TCAAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGACCAGGGCCTGGGATTTaGGTTTTCCCTGCACTCAAG +
Preference number: 2 (lower is better)
Translates to: SSTLCIIQKFHSLVAATGPGPGI*VFPALK
Trigger: CTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGG...TCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp TTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCGTGGGGCAGTACTCATaGTGGTATAGACTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: LLFPRAWDLSFPCTQVLFVGQYS*WYRLLG
Trigger: GCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC...GAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR TCA 90 bp TCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGTGTGTGACATTTCAATaGTGTATTTCCCTTCCTTGT +
Preference number: 2 (lower is better)
Translates to: SHNPLCLSLCPAIASMFRCVTFQ*CISLPC
Trigger: ACAAGGAAGGGAAATACATCATTGAAATGTCACACA...CCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532314.5
3UTR-3UTR GCA 90 bp GTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACACCCTGTTCTAAAGGGTaGCTGGTAGTGGATATGGTG +
Preference number: 2 (lower is better)
Translates to: VCPLFTQKEVEQKRIPPTPCSKG*LVVDMV
Trigger: CACCATATCCACTACCAGGCACCCTTTAGAACAGGG...TGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp AAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAACTCTGCCTGAGTCTATaGCCTGCCATCGCTTCCATG +
Preference number: 2 (lower is better)
Translates to: KHFMYHTKVSFAGGSHGKLCLSL*PAIASM
Trigger: CATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAG...TTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp ATTTCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTCTGCCTGAGTCTATaGCCTGCCATCGCTTCCATG +
Preference number: 2 (lower is better)
Translates to: ISLQPKSFLICCSVVHDLLCLSL*PAIASM
Trigger: CATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAG...TAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR GCA 90 bp AAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAATCCCACAATCCTCTCTaGCTGAGTCTATGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: KHFMYHTKVSFAGGSHGKSHNPL*LSLCPA
Trigger: GGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA...TTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp TGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAATCATCTGCTGTTCTGTaGTCCATGATCTACTTGCCC +
Preference number: 2 (lower is better)
Translates to: CPVTQGLSSVHSKRGGAKSSAVL*SMIYLP
Trigger: GGGCAAGTAGATCATGGACCACAGAACAGCAGATGA...TTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR CAA 90 bp AACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTaGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGG +
Preference number: 2 (lower is better)
Translates to: NPSLFSSAVLWSMIY*PCDPRFVLCSLKKR
Trigger: CCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp CCCACCCAATGGCAAAAGTTAGATACTCGAAAGTGCCTCTTCAGTGCCAAGATATCATCTGCTGTTCTGTaGTCCATGATCTACTTGCCC +
Preference number: 2 (lower is better)
Translates to: PTQWQKLDTRKCLFSAKISSAVL*SMIYLP
Trigger: GGGCAAGTAGATCATGGACCACAGAACAGCAGATGA...TATCTTGGCACTGAAGAGGCACTTTCGAGTATCTAACTTTTGCCATTGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CCA 90 bp GTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACACCTTCCTTGTACTTCTaGCTCGTCTCAAAAGCTTGC +
Preference number: 2 (lower is better)
Translates to: VCPLFTQKEVEQKRIPPTPSLYF*LVSKAC
Trigger: GCAAGCTTTTGAGACGAGCCAGAAGTACAAGGAAGG...TGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532314.5
3UTR-3UTR CAA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGGCTGGTATAGACTGCTaGGCAGGGCCGTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGEAGIDC*AGPWGG
Trigger: CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGC...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp GACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCCCCCCAGGGCCTGGGATTaGAGTTTTCCCTGCACTCAA +
Preference number: 3 (lower is better)
Translates to: DCLLWKQPTRGCSASSCPPRAWD*SFPCTQ
Trigger: TTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGG...GGGACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCGCTGGTATAGACTGCTaGGCAGGGCCGTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: ASMFRILGTERPTTIPFPAGIDC*AGPWGG
Trigger: CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGC...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR CCA 72 bp TGGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTaGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGC +
Preference number: 3 (lower is better)
Translates to: WASEKAHKDCLL*KQPTRGCSASS
Trigger: GCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp TTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCTACAGCTGGTATAGACTGCTaGGCAGGGCCGTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: FPRAWDLSFPCTQVLFPTAGIDC*AGPWGG
Trigger: CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGC...TGTAGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp CTACAAATAGGGGTAGGAAACTTCATCCTCAGAGACTCTGGTCTCCTGGTGTCTGCTGGTATAGACTGCTaGGCAGGGCCGTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: LQIGVGNFILRDSGLLVSAGIDC*AGPWGG
Trigger: CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGC...AGACACCAGGAGACCAGAGTCTCTGAGGATGAAGTTTCCTACCCCTATTTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR GCA 72 bp AGCAGTGACTGGGCCTCAGAGAAAGCCCATAAAGACTaGTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCC +
Preference number: 3 (lower is better)
Translates to: SSDWASEKAHKD*LLWKQPTRGCS
Trigger: GGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCCAGTCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR GCA 72 bp ACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATaGCCTGCCATCGCTTCCATGTTCAGGATCTTGGGA +
Preference number: 3 (lower is better)
Translates to: TDSSHNPLCLSL*PAIASMFRILG
Trigger: TCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR GCA 72 bp GGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTaGCTGAGTCTATGCCCTGCCATCGCTTCCATGTTC +
Preference number: 3 (lower is better)
Translates to: GGAKTDSSHNPL*LSLCPAIASMF
Trigger: GAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR CCA 72 bp GTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTTaGGAACAGAAAGACCCACAACCATCCCTTTCCCCC +
Preference number: 3 (lower is better)
Translates to: VYALPSLPCSGS*EQKDPQPSLSP
Trigger: GGGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp AAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTGGTCCATGATCTACTaGCCCTGTGACCCAAGGTTT +
Preference number: 3 (lower is better)
Translates to: KVSFAGGSHGKDWPRSTDWSMIY*PCDPRF
Trigger: AAACCTTGGGTCACAGGGCAAGTAGATCATGGACCA...ATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGCCTGTGACCCAAGGTTaGTCCTCTGTTCACTCAAAA +
Preference number: 3 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGPVTQG*SSVHSK
Trigger: TTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGG...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp CCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTTGGTCCATGATCTACTaGCCCTGTGACCCAAGGTTT +
Preference number: 3 (lower is better)
Translates to: PQRKPIKTAYSGSSRLGAWSMIY*PCDPRF
Trigger: AAACCTTGGGTCACAGGGCAAGTAGATCATGGACCA...AGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp CACCCCACCCAATGGCAAAAGTTAGATACTCGAAAGTGCCTCTTCAGTGCCAAGTCCATGTTCAGGATCTaGGGAACAGAAAGACCCACA +
Preference number: 3 (lower is better)
Translates to: HPTQWQKLDTRKCLFSAKSMFRI*GTERPT
Trigger: TGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGA...CTTGGCACTGAAGAGGCACTTTCGAGTATCTAACTTTTGCCATTGGGTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp TTTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCAGGGCCTGGGATTaGAGTTTTCCCTGCACTCAA +
Preference number: 3 (lower is better)
Translates to: FTISQGLGFEFSLHSSPFPRAWD*SFPCTQ
Trigger: TTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGG...AAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR TCA 72 bp ACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATaGTCTACTTGCCCTGTGACCCAAGGTTTGTCCTCT +
Preference number: 3 (lower is better)
Translates to: TQVFSHLLFCGP*STCPVTQGLSS
Trigger: AGAGGACAAACCTTGGGTCACAGGGCAAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR CCA 72 bp GACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTaGAGCAAAAACGGATTCCTCCCACAATCCTCTCTG +
Preference number: 3 (lower is better)
Translates to: DPRFVLCSLKKR*SKNGFLPQSSL
Trigger: CAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR CCA 72 bp CACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTaGTCCATGATCTACTTGCCCTGTGACCCAAGGTTT +
Preference number: 3 (lower is better)
Translates to: HSNPSLFSSAVL*SMIYLPCDPRF
Trigger: AAACCTTGGGTCACAGGGCAAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCCCTGTGACCCAAGGTTaGTCCTCTGTTCACTCAAAA +
Preference number: 3 (lower is better)
Translates to: LLVSETRISLQPKSFLICPVTQG*SSVHSK
Trigger: TTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGG...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp GTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACACCTGTGACCCAAGGTTaGTCCTCTGTTCACTCAAAA +
Preference number: 3 (lower is better)
Translates to: VCPLFTQKEVEQKRIPPTPVTQG*SSVHSK
Trigger: TTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGG...TGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR-3UTR CAA 90 bp TCAAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGATGGTCCATGATCTACTaGCCCTGTGACCCAAGGTTT +
Preference number: 3 (lower is better)
Translates to: SSTLCIIQKFHSLVAATGWSMIY*PCDPRF
Trigger: AAACCTTGGGTCACAGGGCAAGTAGATCATGGACCA...TCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
3UTR TCA 72 bp AAACTTCATCCTCAGAGACTCTGGTCTCCTGGTGTCTaGGACCAGAATTTCACTCCAACCCAAGTCTTTTCT +
Preference number: 3 (lower is better)
Translates to: KLHPQRLWSPGV*DQNFTPTQVFS
Trigger: AGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAGACCAGAGTCTCTGAGGATGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGGAGGGGCTGGCGCCGTaGAGCCCCCGCAGAGACGGT +
Preference number: 4 (lower is better)
Translates to: GQYSCWYRLLGRAVGREGEGLAP*SPRRDG
Trigger: ACCGTCTCTGCGGGGGCTGCACGGCGCCAGCCCCTC...CCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGGAGGGGCTGGCGCCGTaGAGCCCCCGCAGAGACGGT +
Preference number: 4 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGEGLAP*SPRRDG
Trigger: ACCGTCTCTGCGGGGGCTGCACGGCGCCAGCCCCTC...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCTGCTTGGCAGGGCCGTaGGGAGGGAGGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: GSTHAGIDCLAGPWGGRGCLAGP*GGRGMR
Trigger: CCGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCA...GCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAATGCCCTGGTGGGCTaGAGGGGCTGGCGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGNALVG*RGWRRA
Trigger: TGCACGGCGCCAGCCCCTCCAGCCCACCAGGGCATT...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR TCA 90 bp GGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGCCGAGTGGAGCCCCGTaGGCAAGAGGCGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: GWGSTHAGIDCLAGPWGGPSGAP*ARGAVQ
Trigger: CTGAACAGCGCCTCTTGCTCACGGGGCTCCACTCGG...CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGCGGGCTGGAGGACAATaGCCTGGTGGGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: YSCWYRLLGRAVGREGHARAGGQ*PGGLEG
Trigger: CCCCTCCAGCCCACCAGGGCATTGTCCTCCAGCCCG...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGTGGAGGACAATGCCCTaGTGGGCTGGAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGWRTMP*WAGGAG
Trigger: GCCAGCCCCTCCAGCCCACCAGGGCATTGTCCTCCA...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR TCA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGAGACGGTCGCAGGTaGAGCAGCGGAGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGRDGRR*SSGAGW
Trigger: CCAACCTGCTCCGCTGCTTCACCTGCGACCGTCTCT...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR TCA 90 bp GGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCAGAGACGGTCGCAGGTaGAGCAGCGGAGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GSTHAGIDCLAGPWGGRGRDGRR*SSGAGW
Trigger: CCAACCTGCTCCGCTGCTTCACCTGCGACCGTCTCT...GCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR TCA 90 bp GTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGCCGAGTGGAGCCCCGTaGGCAAGAGGCGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VGQYSCWYRLLGRAVGREPSGAP*ARGAVQ
Trigger: CTGAACAGCGCCTCTTGCTCACGGGGCTCCACTCGG...CTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGAGGAAGGGCACACCCTaGCTGAGCCCCTCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GQYSCWYRLLGRAVGREGRKGTP*LSPSVP
Trigger: TGGGACTGAGGGGCTCAGGCAGGGTGTGCCCTTCCT...CCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGGGGCAGGAGAAGTGTTaGGGGGCTGCCCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGEGQEKC*GAARPG
Trigger: CCCTGGCCGGGCAGCCCCCCAACACTTCTCCTGCCC...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
CDS-3UTR CCA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGTGCTTGGCAGGGCCGTaGGGAGGGAGGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGECLAGP*GGRGMR
Trigger: CCGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCA...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGGCCGATCCAGGCTTCTaGCGCCAAAGCCAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: GQYSCWYRLLGRAVGREGADPGF*RQSQGV
Trigger: GACTCCCTGGCTTTGGCGCCAGAAGCCTGGATCGGC...CCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000534711.5
CDS-3UTR TCA 90 bp CTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACCTCCCCAGAGACGGTCGCAGGTaGAGCAGCGGAGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LVAATGKTGPVALIFHLPRDGRR*SSGAGW
Trigger: CCAACCTGCTCCGCTGCTTCACCTGCGACCGTCTCT...GGGGAGGTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp GTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGTCACAGCTGGGCATaGCGGGCTGGAGGACAATGC +
Preference number: 4 (lower is better)
Translates to: VGQYSCWYRLLGRAVGREGHSWA*RAGGQC
Trigger: GCATTGTCCTCCAGCCCGTCATGCCCAGCTGTGACC...CTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGCGGGCTGGAGGACAATaGCCTGGTGGGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGERAGGQ*PGGLEG
Trigger: CCCCTCCAGCCCACCAGGGCATTGTCCTCCAGCCCG...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGAGGAAGGGCACACCCTaGCTGAGCCCCTCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VGQYSCWYRLLGRAVGRERKGTP*LSPSVP
Trigger: TGGGACTGAGGGGCTCAGGCAGGGTGTGCCCTTCCT...CTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGACATTGGGCTCCGGCTaGAGGAAACGGGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GWGSTHAGIDCLAGPWGGTLGSG*RKRALL
Trigger: AAGGAGGGCCCGTTTCCTGCAGCCGGAGCCCAATGT...CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp GGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCTTGGGGGCTCAAGACTaGGGCTGCAAAGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSTHAGIDCLAGPWGGRGLGAQD*GCKAGQ
Trigger: CTGGCCAGCTTTGCAGCCCCAGTCTTGAGCCCCCAA...GCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCAGGGCAGGAGAAGTGTTaGGGGGCTGCCCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SFAGGSHGKDWPRSTDFPGQEKC*GAARPG
Trigger: CCCTGGCCGGGCAGCCCCCCAACACTTCTCCTGCCC...TGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
CDS-3UTR CCA 90 bp GTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGCTGGGCATGACGGGCTaGAGGACAATGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VGQYSCWYRLLGRAVGRELGMTG*RTMPWW
Trigger: CCACCAGGGCATTGTCCTCCAGCCCGTCATGCCCAG...CTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGGAGGCGCTGTTCAGCTaGCCCGCAACCCACGTTGAC +
Preference number: 4 (lower is better)
Translates to: YSCWYRLLGRAVGREGHAEALFS*PATHVD
Trigger: GTCAACGTGGGTTGCGGGCCAGCTGAACAGCGCCTC...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCCCTCCCAGGGCAGGCTTTaGGGGTCTGCACCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DCLLWKQPTRGCSASSCPSQGRL*GSAPAA
Trigger: TGCTGCTGGTGCAGACCCCCAAAGCCTGCCCTGGGA...GGGACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp CATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACCCGAGTGGAGCCCCGTaGGCAAGAGGCGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: HSLVAATGKTGPVALIFHPSGAP*ARGAVQ
Trigger: CTGAACAGCGCCTCTTGCTCACGGGGCTCCACTCGG...GTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCTGGTATAGACTaGTTGGCAGGGCCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GQYSCWYRLLGRAVGREGHAGID*LAGPWG
Trigger: TCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATG...CCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCCATGCTGGTATAGACTaGTTGGCAGGGCCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GSTHAGIDCLAGPWGGRGHAGID*LAGPWG
Trigger: TCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATG...GCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGCAGCGGAGCAGGTTaGCTAGAGCCGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GWGSTHAGIDCLAGPWGGSSGAG*LEPCFR
Trigger: CCTGAAACACGGCTCTAGCCAACCTGCTCCGCTGCT...CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
CDS-3UTR CCA 90 bp CATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACTGGAGGACAATGCCCTaGTGGGCTGGAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HSLVAATGKTGPVALIFHWRTMP*WAGGAG
Trigger: GCCAGCCCCTCCAGCCCACCAGGGCATTGTCCTCCA...GTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGATGTCAGCTACCGAGTaGAGCCCCGTGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGMSATE*SPVSKR
Trigger: CCTCTTGCTCACGGGGCTCCACTCGGTAGCTGACAT...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCTGCTTGGCAGGGCCGTaGGGAGGGAGGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: SSHNPLCLSLCPAIASMFCLAGP*GGRGMR
Trigger: CCGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCA...GAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGTGTCGCCCTGTCCCCTaGATCCCCATTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VGQYSCWYRLLGRAVGRECRPVP*IPILLW
Trigger: CCAGAGCAGAATGGGGATCCAGGGGACAGGGCGACA...CTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000534711.5
CDS-3UTR GCA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGCGGGCTGGAGGACAATaGCCTGGTGGGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGRAGGQ*PGGLEG
Trigger: CCCCTCCAGCCCACCAGGGCATTGTCCTCCAGCCCG...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGAGCGGGGCAGATAGCTaGGGAAAGTCTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VGQYSCWYRLLGRAVGRESGADS*GKSWWG
Trigger: TCCCCACCAAGACTTTCCGCAGCTATCTGCCCCGCT...CTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGACACAGCTGTAAGTaGGGTGACAGCGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VGQYSCWYRLLGRAVGREGHSCK*GDSGAD
Trigger: ATCTGCCCCGCTGTCACCGCACTTACAGCTGTGTCC...CTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACCTCCCCCATGCTGGTATAGACTaGTTGGCAGGGCCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LVAATGKTGPVALIFHLPHAGID*LAGPWG
Trigger: TCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATG...GGGGAGGTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGTCTCTCCCTGACTGCTaGCCACTCCTGAGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGSLPDC*PLLSLN
Trigger: GTTAAGGCTCAGGAGTGGGCAGCAGTCAGGGAGAGA...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACCTCCCCCCCACAGCATCCAGTTaGATTGTCGCCCTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LVAATGKTGPVALIFHLPPTASS*IVALSP
Trigger: AGGGGACAGGGCGACAATGCAACTGGATGCTGTGGG...GGGGAGGTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGCCCACAGCATCCAGTTaGATTGTCGCCCTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: YSCWYRLLGRAVGREGHAPTASS*IVALSP
Trigger: AGGGGACAGGGCGACAATGCAACTGGATGCTGTGGG...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000534711.5
CDS-3UTR CCA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGCTGGGCATGACGGGCTaGAGGACAATGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGELGMTG*RTMPWW
Trigger: CCACCAGGGCATTGTCCTCCAGCCCGTCATGCCCAG...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGATGTCAGCTACCGAGTaGAGCCCCGTGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: YSCWYRLLGRAVGREGHAMSATE*SPVSKR
Trigger: CCTCTTGCTCACGGGGCTCCACTCGGTAGCTGACAT...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCGCACAGACGCTGCCATaGGAGCAACGTCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: GSTHAGIDCLAGPWGGRGAQTLP*EQRHLQ
Trigger: TTGCAGATGACGTTGCTCCCATGGCAGCGTCTGTGC...GCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp GTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGCTGCTCTGGCAAACCTaGCAGCCGATCCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGQYSCWYRLLGRAVGRELLWQT*QPIQAS
Trigger: AGAAGCCTGGATCGGCTGCCAGGTTTGCCAGAGCAG...CTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000534711.5
CDS-3UTR CCA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGATCCCCATTCTGCTCTaGCAAACCTGGCAGCCGATC +
Preference number: 4 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGIPILL*QTWQPI
Trigger: GATCGGCTGCCAGGTTTGCCAGAGCAGAATGGGGAT...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000534711.5
CDS-3UTR TCA 90 bp AAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATCCGAGTGGAGCCCCGTaGGCAAGAGGCGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: KVSFAGGSHGKDWPRSTDPSGAP*ARGAVQ
Trigger: CTGAACAGCGCCTCTTGCTCACGGGGCTCCACTCGG...ATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCGGGGCAACTGACAGCTaGCAGCAGAGGCGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: CPAIASMFRILGTERPTTGATDS*QQRRRG
Trigger: GCCTCGGCGCCTCTGCTGTCAGCTGTCAGTTGCCCC...GGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp TGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCGCTGGCGGGGGCAACTaGCAGCTGACAGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: CPAIASMFRILGTERPTTAGGGN*QLTAEA
Trigger: CGCCTCTGCTGTCAGCTGTCAGTTGCCCCCGCCAGC...GGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp GGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGGTGGGGCAGTACTCATaGTGGTATAGACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GQYSCWYRLLGRAVGREGVGQYS*WYRLLG
Trigger: GCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC...CCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGTCTCTCCCTGACTGCTaGCCACTCCTGAGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: YSCWYRLLGRAVGREGHASLPDC*PLLSLN
Trigger: GTTAAGGCTCAGGAGTGGGCAGCAGTCAGGGAGAGA...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGCCTGAGTCTATGCCCTaGCATCGCTTCCATGTTCAG +
Preference number: 4 (lower is better)
Translates to: GWGSTHAGIDCLAGPWGGPESMP*HRFHVQ
Trigger: CTGAACATGGAAGCGATGGCAGGGCATAGACTCAGG...CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTAATGCCCTGGTGGGCTaGAGGGGCTGGCGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: GGAKTDSSHNPLCLSLCPNALVG*RGWRRA
Trigger: TGCACGGCGCCAGCCCCTCCAGCCCACCAGGGCATT...AGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp AAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTGGAGGACAATGCCCTaGTGGGCTGGAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KVSFAGGSHGKDWPRSTDWRTMP*WAGGAG
Trigger: GCCAGCCCCTCCAGCCCACCAGGGCATTGTCCTCCA...ATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGCGGCCATGGCTCCCTTaGAAGGACTTGGAAATAAGC +
Preference number: 4 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGRPWLP*KDLEIS
Trigger: GCTTATTTCCAAGTCCTTCCAAGGGAGCCATGGCCG...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGGGGCAGTACTCATGCTaGTATAGACTGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGGQYSC*YRLLGR
Trigger: CCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACTGTCGCCCTGTCCCCTaGATCCCCATTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HSLVAATGKTGPVALIFHCRPVP*IPILLW
Trigger: CCAGAGCAGAATGGGGATCCAGGGGACAGGGCGACA...GTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp GGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCCCCTCCTGAGGGAATaGAGGAAAAGGGAATCAGCT +
Preference number: 4 (lower is better)
Translates to: GQYSCWYRLLGRAVGREGPLLRE*RKRESA
Trigger: AGCTGATTCCCTTTTCCTCCATTCCCTCAGGAGGGG...CCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp GGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCCAGGTATACAAACCCTaGTTCGGTTCTCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSTHAGIDCLAGPWGGRGQVYKP*FGSLLR
Trigger: CCTCAGGAGAGAACCGAATCAGGGTTTGTATACCTG...GCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp AGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCCGGGCTGGAGGACAATaGCCTGGTGGGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLCPAIASMFRILGTERPRAGGQ*PGGLEG
Trigger: CCCCTCCAGCCCACCAGGGCATTGTCCTCCAGCCCG...GGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACGGACACAGCTGTAAGTaGGGTGACAGCGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: HSLVAATGKTGPVALIFHGHSCK*GDSGAD
Trigger: ATCTGCCCCGCTGTCACCGCACTTACAGCTGTGTCC...GTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGAAGGGCACACCCTaGCTGAGCCCCTCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SSHNPLCLSLCPAIASMFRKGTP*LSPSVP
Trigger: TGGGACTGAGGGGCTCAGGCAGGGTGTGCCCTTCCT...GAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCCCCTGTTCTAAAGGGTaGCTGGTAGTGGATATGGTG +
Preference number: 4 (lower is better)
Translates to: GSTHAGIDCLAGPWGGRGPCSKG*LVVDMV
Trigger: CACCATATCCACTACCAGGCACCCTTTAGAACAGGG...GCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCCCTGTTCTAAAGGGTaGCTGGTAGTGGATATGGTG +
Preference number: 4 (lower is better)
Translates to: GQYSCWYRLLGRAVGREGPCSKG*LVVDMV
Trigger: CACCATATCCACTACCAGGCACCCTTTAGAACAGGG...CCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGCCTCACCTTGAGGTCTaGTCCAGAGATCTCCGTCTA +
Preference number: 4 (lower is better)
Translates to: VGQYSCWYRLLGRAVGREPHLEV*SRDLRL
Trigger: TAGACGGAGATCTCTGGAGCAGACCTCAAGGTGAGG...CTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGGACATCAGGGGAGCTaGGACCTCAGGAGGACCCCT +
Preference number: 4 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGGHQGS*DLRRTP
Trigger: AGGGGTCCTCCTGAGGTCGCAGCTCCCCTGATGTCC...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCAATGCCCTGGTGGGCTaGAGGGGCTGGCGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: ASMFRILGTERPTTIPFPNALVG*RGWRRA
Trigger: TGCACGGCGCCAGCCCCTCCAGCCCACCAGGGCATT...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGCTGGGCATGACGGGCTaGAGGACAATGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGLGMTG*RTMPWW
Trigger: CCACCAGGGCATTGTCCTCCAGCCCGTCATGCCCAG...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCGAGGCGCTGTTCAGCTaGCCCGCAACCCACGTTGAC +
Preference number: 4 (lower is better)
Translates to: SSHNPLCLSLCPAIASMFEALFS*PATHVD
Trigger: GTCAACGTGGGTTGCGGGCCAGCTGAACAGCGCCTC...GAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp AAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCATGTCAGCTACCGAGTaGAGCCCCGTGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KTAYSGSSRLGAVPRAAVMSATE*SPVSKR
Trigger: CCTCTTGCTCACGGGGCTCCACTCGGTAGCTGACAT...GACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGCTATTTCCCAGGGCCTaGGATTTGAGTTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGLFPRA*DLSFPC
Trigger: GCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAG...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGCCCAGGAGCAGTGACTaGGCCTCAGAGAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGEPRSSD*ASEKAH
Trigger: ATGGGCTTTCTCTGAGGCCCAGTCACTGCTCCTGGG...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCGGGGAGAGGGAGGGCTaGCGGGGGCAACTGACAGCT +
Preference number: 4 (lower is better)
Translates to: ASMFRILGTERPTTIPFPGEREG*RGQLTA
Trigger: AGCTGTCAGTTGCCCCCGCCAGCCCTCCCTCTCCCC...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp GGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCGACAGCTGGAGCCAATaGGAAATGGGTAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: GSTHAGIDCLAGPWGGRGDSWSQ*EMGSMS
Trigger: TGACATGCTACCCATTTCCCATTGGCTCCAGCTGTC...GCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp GACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCCCTGGTCTCCTGGTGTCTaGGACCAGAATTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: DCLLWKQPTRGCSASSCPWSPGV*DQNFTP
Trigger: TGGAGTGAAATTCTGGTCTCAGACACCAGGAGACCA...GGGACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGTGGTCTCCTGGTGTCTaGGACCAGAATTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: YSCWYRLLGRAVGREGHAWSPGV*DQNFTP
Trigger: TGGAGTGAAATTCTGGTCTCAGACACCAGGAGACCA...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp CATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACTCCTCGGTCTGTGGGTaGATGTGGCTGTGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: HSLVAATGKTGPVALIFHSSVCG*MWLCVV
Trigger: CACAACACACAGCCACATTCACCCACAGACCGAGGA...GTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp TCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCGCTGCCCCCTCACCTTaGGGTCTGCTCCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: SSHNPLCLSLCPAIASMFAAPSP*GLLQRS
Trigger: AGATCTCTGGAGCAGACCTCAAGGTGAGGGGGCAGC...GAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGCCCTGTTCTAAAGGGTaGCTGGTAGTGGATATGGTG +
Preference number: 4 (lower is better)
Translates to: YSCWYRLLGRAVGREGHAPCSKG*LVVDMV
Trigger: CACCATATCCACTACCAGGCACCCTTTAGAACAGGG...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp AAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCTCTCTCCCTGACTGCTaGCCACTCCTGAGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: KTAYSGSSRLGAVPRAAVSLPDC*PLLSLN
Trigger: GTTAAGGCTCAGGAGTGGGCAGCAGTCAGGGAGAGA...GACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGAGGAAGATTGCCTTCTaGCCACGCGCCAGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGRKIAF*PRASLR
Trigger: TCGGAGGCTGGCGCGTGGGCAGAAGGCAATCTTCCT...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp CATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACGGAATAGAGGAAGATTaGCTTCTGCCCACGCGCCAG +
Preference number: 4 (lower is better)
Translates to: HSLVAATGKTGPVALIFHGIEED*LLPTRQ
Trigger: CTGGCGCGTGGGCAGAAGGCAATCTTCCTCTATTCC...GTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp AAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTGGGGGCTCAAGACTaGGGCTGCAAAGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KVSFAGGSHGKDWPRSTDLGAQD*GCKAGQ
Trigger: CTGGCCAGCTTTGCAGCCCCAGTCTTGAGCCCCCAA...ATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCAGTTAATGCCCTGGTGGGCTaGAGGGGCTGGCGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: HVQDLGNRKTHNHPFPPVNALVG*RGWRRA
Trigger: TGCACGGCGCCAGCCCCTCCAGCCCACCAGGGCATT...AACTGGGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GACTGGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTCTGGGCATGACGGGCTaGAGGACAATGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: DWASEKAHKDCLLWKQPTLGMTG*RTMPWW
Trigger: CCACCAGGGCATTGTCCTCCAGCCCGTCATGCCCAG...AGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGGAGACTCTGGTCTCCTaGTGTCTGAGACCAGAATTT +
Preference number: 4 (lower is better)
Translates to: GWGSTHAGIDCLAGPWGGETLVS*CLRPEF
Trigger: AAATTCTGGTCTCAGACACCAGGAGACCAGAGTCTC...CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTTCCCCTCCAGGGGACTaGGTCCCAGGAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: GGAKTDSSHNPLCLSLCPSPPGD*VPGAVT
Trigger: AGTCACTGCTCCTGGGACCCAGTCCCCTGGAGGGGA...AGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAAAAGTTTCATTCGCTaGTGGCAGCCACGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: GWGSTHAGIDCLAGPWGGKSFIR*WQPRER
Trigger: TCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTT...CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTTCCTGTCCTCCGCAGTaGCCACAGGCACCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PQRKPIKTAYSGSSRLGASCPPQ*PQAPSC
Trigger: ACAGCTGGGTGCCTGTGGCCACTGCGGAGGACAGGA...AGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGATCCCCATTCTGCTCTaGCAAACCTGGCAGCCGATC +
Preference number: 4 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGEIPILL*QTWQPI
Trigger: GATCGGCTGCCAGGTTTGCCAGAGCAGAATGGGGAT...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000534711.5
CDS-3UTR TCA 90 bp TGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCGGTCACAGCTGGGCATaGCGGGCTGGAGGACAATGC +
Preference number: 4 (lower is better)
Translates to: CHRFHVQDLGNRKTHNHPGHSWA*RAGGQC
Trigger: GCATTGTCCTCCAGCCCGTCATGCCCAGCTGTGACC...GGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGAGTTCTGTCTCTCCCTaGCTGCTGCCCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGSSVSP*LLPTPE
Trigger: CTCAGGAGTGGGCAGCAGTCAGGGAGAGACAGAACT...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TTTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTGAGGGGCTGGCGCCGTaGAGCCCCCGCAGAGACGGT +
Preference number: 4 (lower is better)
Translates to: FTISQGLGFEFSLHSSPFEGLAP*SPRRDG
Trigger: ACCGTCTCTGCGGGGGCTGCACGGCGCCAGCCCCTC...AAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCCGGGCTGGAGGACAATaGCCTGGTGGGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLVSETRISLQPKSFLICRAGGQ*PGGLEG
Trigger: CCCCTCCAGCCCACCAGGGCATTGTCCTCCAGCCCG...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCAGCGGGGCAGATAGCTaGGGAAAGTCTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: HTKVSFAGGSHGKDWPRSSGADS*GKSWWG
Trigger: TCCCCACCAAGACTTTCCGCAGCTATCTGCCCCGCT...GCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCGGACACAGCTGTAAGTaGGGTGACAGCGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: HTKVSFAGGSHGKDWPRSGHSCK*GDSGAD
Trigger: ATCTGCCCCGCTGTCACCGCACTTACAGCTGTGTCC...GCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCAGCCCAGTGTGGTTTTaGAGCTCTCACAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: GSTHAGIDCLAGPWGGRGSPVWF*SSHRKC
Trigger: ACATTTTCTGTGAGAGCTGCAAAACCACACTGGGCT...GCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGCTCGTCTCAAAAGCTTaGTCATATTTCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GWGSTHAGIDCLAGPWGGLVSKA*SYFQPS
Trigger: ACTGGGCTGGAAATATGAGCAAGCTTTTGAGACGAG...CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCTCGTCTCAAAAGCTTaGTCATATTTCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GQYSCWYRLLGRAVGREGLVSKA*SYFQPS
Trigger: ACTGGGCTGGAAATATGAGCAAGCTTTTGAGACGAG...CCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCAAGGGGAGGGAGAGCATaGAGGCAGGTATACAAACCC +
Preference number: 4 (lower is better)
Translates to: SFAGGSHGKDWPRSTDFPRGGRA*RQVYKP
Trigger: GGGTTTGTATACCTGCCTGCATGCTCTCCCTCCCCT...TGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp CCCACCCAATGGCAAAAGTTAGATACTCGAAAGTGCCTCTTCAGTGCCAAGATAGGGCAGGAGAAGTGTTaGGGGGCTGCCCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PTQWQKLDTRKCLFSAKIGQEKC*GAARPG
Trigger: CCCTGGCCGGGCAGCCCCCCAACACTTCTCCTGCCC...TATCTTGGCACTGAAGAGGCACTTTCGAGTATCTAACTTTTGCCATTGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
CDS-3UTR CCA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCAATGCCCTGGTGGGCTaGAGGGGCTGGCGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: LLVSETRISLQPKSFLICNALVG*RGWRRA
Trigger: TGCACGGCGCCAGCCCCTCCAGCCCACCAGGGCATT...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CACCCCACCCAATGGCAAAAGTTAGATACTCGAAAGTGCCTCTTCAGTGCCAAGTGGAGGACAATGCCCTaGTGGGCTGGAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HPTQWQKLDTRKCLFSAKWRTMP*WAGGAG
Trigger: GCCAGCCCCTCCAGCCCACCAGGGCATTGTCCTCCA...CTTGGCACTGAAGAGGCACTTTCGAGTATCTAACTTTTGCCATTGGGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGCCTTCCTTGTACTTCTaGCTCGTCTCAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: YSCWYRLLGRAVGREGHAPSLYF*LVSKAC
Trigger: GCAAGCTTTTGAGACGAGCCAGAAGTACAAGGAAGG...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACATGCTTGGCAGGGCCGTaGGGAGGGAGGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: VCPLFTQKEVEQKRIPPTCLAGP*GGRGMR
Trigger: CCGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCA...TGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTGCTTGGCAGGGCCGTaGGGAGGGAGGGGCATGCGG +
Preference number: 4 (lower is better)
Translates to: VTQGLSSVHSKRGGAKTDCLAGP*GGRGMR
Trigger: CCGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCA...ATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCCCCAGGAGCAGTGACTaGGCCTCAGAGAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HTKVSFAGGSHGKDWPRSPRSSD*ASEKAH
Trigger: ATGGGCTTTCTCTGAGGCCCAGTCACTGCTCCTGGG...GCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCTCCCCTCCAGGGGACTaGGTCCCAGGAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: PAIASMFRILGTERPTTISPPGD*VPGAVT
Trigger: AGTCACTGCTCCTGGGACCCAGTCCCCTGGAGGGGA...GATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACAGTTTCATTCGCTGGTaGCAGCCACGGGAAAGACTG +
Preference number: 4 (lower is better)
Translates to: HSLVAATGKTGPVALIFHSFIRW*QPRERL
Trigger: CAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACT...GTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCGCCGATCCAGGCTTCTaGCGCCAAAGCCAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: ASMFRILGTERPTTIPFPADPGF*RQSQGV
Trigger: GACTCCCTGGCTTTGGCGCCAGAAGCCTGGATCGGC...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGGAGCCTTTTAAGAGTTaGGGATGCCTGAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGEPFKS*GCLKVF
Trigger: AAAGACCTTCAGGCATCCCCAACTCTTAAAAGGCTC...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp TGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCAGTTCTGTCTCTCCCTaGCTGCTGCCCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CPAIASMFRILGTERPTTSSVSP*LLPTPE
Trigger: CTCAGGAGTGGGCAGCAGTCAGGGAGAGACAGAACT...GGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp ACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTACAATCCTCTCTGCCTaGGTCTATGCCCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: TKVSFAGGSHGKDWPRSTTILSA*VYALPS
Trigger: CGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGT...AGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCACAATCCTCTCTGCCTaGGTCTATGCCCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: SSHNPLCLSLCPAIASMFTILSA*VYALPS
Trigger: CGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGT...GAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGCCAGGGCCTGGGATTTaGGTTTTCCCTGCACTCAAG +
Preference number: 4 (lower is better)
Translates to: SHNPLCLSLCPAIASMFRPGPGI*VFPALK
Trigger: CTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGG...CCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp GACTGGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTCGGAGCAGGTTGGCTTaGGGTCTGCTCCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: DWASEKAHKDCLLWKQPTRSRLA*GLLQRS
Trigger: AGATCTCTGGAGCAGACCTCAAGCCAACCTGCTCCG...AGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534810.3
CDS-3UTR TCA 90 bp AGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCCTGTTCCACTCTCTCTaGAGGCCGCCAGGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SLCPAIASMFRILGTERPLFHSL*RPPGSL
Trigger: GAGACTGCCTGGCGGCCTTCAGAGAGAGTGGAACAG...GGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp GACTGGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTGGACACAGCTGTAAGTaGGGTGACAGCGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: DWASEKAHKDCLLWKQPTGHSCK*GDSGAD
Trigger: ATCTGCCCCGCTGTCACCGCACTTACAGCTGTGTCC...AGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACCTCCCCAGCCCAGTGTGGTTTTaGAGCTCTCACAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: LVAATGKTGPVALIFHLPSPVWF*SSHRKC
Trigger: ACATTTTCTGTGAGAGCTGCAAAACCACACTGGGCT...GGGGAGGTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp AACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCTCTCTCCCTGACTGCTaGCCACTCCTGAGCCTTAAC +
Preference number: 4 (lower is better)
Translates to: NGFLPQSSLPESMPCHRFSLPDC*PLLSLN
Trigger: GTTAAGGCTCAGGAGTGGGCAGCAGTCAGGGAGAGA...GAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGTCCCACAATCCTCTCTaGCTGAGTCTATGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGSHNPL*LSLCPA
Trigger: GGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp ACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAGAGGCGCTGTTCAGCTaGCCCGCAACCCACGTTGAC +
Preference number: 4 (lower is better)
Translates to: TCPVTQGLSSVHSKRGGAEALFS*PATHVD
Trigger: GTCAACGTGGGTTGCGGGCCAGCTGAACAGCGCCTC...TGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCAGGGCAGTACTCATGCTaGTATAGACTGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SFAGGSHGKDWPRSTDFPGQYSC*YRLLGR
Trigger: CCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC...TGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp ACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCATCCCCTCCAGGGGACTaGGTCCCAGGAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: TCPVTQGLSSVHSKRGGASPPGD*VPGAVT
Trigger: AGTCACTGCTCCTGGGACCCAGTCCCCTGGAGGGGA...TGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCGGAATCGTCAGAGCTTaGAGAGGGATGGAGGAACCG +
Preference number: 4 (lower is better)
Translates to: SSHNPLCLSLCPAIASMFGIVRA*RGMEEP
Trigger: CGGTTCCTCCATCCCTCTCCAAGCTCTGACGATTCC...GAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp AGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCCAAAGCCCTCACGTGTaGCCGCCCATTCTCGCACCT +
Preference number: 4 (lower is better)
Translates to: SLCPAIASMFRILGTERPQSPHV*PPILAP
Trigger: AGGTGCGAGAATGGGCGGCCACACGTGAGGGCTTTG...GGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCAGAGACGGTCGCAGGTaGAGCAGCGGAGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLVSETRISLQPKSFLICRDGRR*SSGAGW
Trigger: CCAACCTGCTCCGCTGCTTCACCTGCGACCGTCTCT...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp AGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCAGTTCTGTCTCTCCCTaGCTGCTGCCCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SLCPAIASMFRILGTERPSSVSP*LLPTPE
Trigger: CTCAGGAGTGGGCAGCAGTCAGGGAGAGACAGAACT...GGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTGCCCGGGCTGAGTTCAGGGTaGCATTGGGCTCCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SNPSLFSSAVLWSMIYLPGLSSG*HWAPAA
Trigger: TGCAGCCGGAGCCCAATGTCACCCTGAACTCAGCCC...GGGCAAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp TGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAAGGAAGGGCACACCCTaGCTGAGCCCCTCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: CPVTQGLSSVHSKRGGAKRKGTP*LSPSVP
Trigger: TGGGACTGAGGGGCTCAGGCAGGGTGTGCCCTTCCT...TTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCCATGCTGGTATAGACTaGTTGGCAGGGCCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: CHRFHVQDLGNRKTHNHPHAGID*LAGPWG
Trigger: TCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATG...GGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGTGGGGCAGTACTCATaGTGGTATAGACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGVGQYS*WYRLLG
Trigger: GCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACCCTGTTCTAAAGGGTaGCTGGTAGTGGATATGGTG +
Preference number: 4 (lower is better)
Translates to: SFAGGSHGKDWPRSTDFPPCSKG*LVVDMV
Trigger: CACCATATCCACTACCAGGCACCCTTTAGAACAGGG...TGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGTTAGATACTCGAAAGTaGCTCTTCAGTGCCAAGATA +
Preference number: 4 (lower is better)
Translates to: GQYSCWYRLLGRAVGREGLDTRK*LFSAKI
Trigger: TATCTTGGCACTGAAGAGGCACTTTCGAGTATCTAA...CCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTCATTTGGAGAAGGGCTaGCCCCTCACCTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GGAKTDSSHNPLCLSLCPHLEKG*PLTLRS
Trigger: AGACCTCAAGGTGAGGGGGCAGCCCTTCTCCAAATG...AGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp CCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCTTCCGCTCCTTCAATTaGGAAGGGGATGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PAIASMFRILGTERPTTIFRSFN*EGDGGG
Trigger: CCCACCCCCATCCCCTTCCCAATTGAAGGAGCGGAA...GATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCCGGCCATGGCTCCCTTaGAAGGACTTGGAAATAAGC +
Preference number: 4 (lower is better)
Translates to: SSHNPLCLSLCPAIASMFRPWLP*KDLEIS
Trigger: GCTTATTTCCAAGTCCTTCCAAGGGAGCCATGGCCG...GAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCATGTCAGCTACCGAGTaGAGCCCCGTGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PAIASMFRILGTERPTTIMSATE*SPVSKR
Trigger: CCTCTTGCTCACGGGGCTCCACTCGGTAGCTGACAT...GATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGCCTTCCTTGTACTTCTaGCTCGTCTCAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGEPSLYF*LVSKAC
Trigger: GCAAGCTTTTGAGACGAGCCAGAAGTACAAGGAAGG...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGAGCCACGGGAAAGACTaGCCCCGTAGCACTGATTTT +
Preference number: 4 (lower is better)
Translates to: SHNPLCLSLCPAIASMFRSHGKD*PRSTDF
Trigger: AAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCT...CCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAGCGCCAGCCTCCGAGTaGCTGAAGGTGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VCPLFTQKEVEQKRIPPTAPASE*LKVLEA
Trigger: TGCCTCCAGCACCTTCAGCCACTCGGAGGCTGGCGC...TGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp CTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTAGAGACGGTCGCAGGTaGAGCAGCGGAGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LCSLKKRWSKNGFLPQSSRDGRR*SSGAGW
Trigger: CCAACCTGCTCCGCTGCTTCACCTGCGACCGTCTCT...AGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCGGTCACAGCTGGGCATaGCGGGCTGGAGGACAATGC +
Preference number: 4 (lower is better)
Translates to: LLFPRAWDLSFPCTQVLFGHSWA*RAGGQC
Trigger: GCATTGTCCTCCAGCCCGTCATGCCCAGCTGTGACC...GAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTGGTCACAGCTGGGCATaGCGGGCTGGAGGACAATGC +
Preference number: 4 (lower is better)
Translates to: SSVHSKRGGAKTDSSHNPGHSWA*RAGGQC
Trigger: GCATTGTCCTCCAGCCCGTCATGCCCAGCTGTGACC...AGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp GGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTCTGTTCTGTGGTCCATaGTCTACTTGCCCTGTGACC +
Preference number: 4 (lower is better)
Translates to: GGAKTDSSHNPLCLSLCPLFCGP*STCPVT
Trigger: GGTCACAGGGCAAGTAGATCATGGACCACAGAACAG...AGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCATGTCAGAGGAGCCTaGTTCCTGGGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLFPRAWDLSFPCTQVLFHVRGA*FLGWAG
Trigger: CCCTGCCCAGCCCAGGAATCAGGCTCCTCTGACATG...GAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp CATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCAGTTGATTCGGTTCTCTCCTaGGGTCAGGGTCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: HVQDLGNRKTHNHPFPPVDSVLS*GQGPVL
Trigger: GAGCACAGGACCCTGACCTCAGGAGAGAACCGAATC...AACTGGGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp CCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTCCTGAGTCTATGCCCTaGCATCGCTTCCATGTTCAG +
Preference number: 4 (lower is better)
Translates to: PQRKPIKTAYSGSSRLGAPESMP*HRFHVQ
Trigger: CTGAACATGGAAGCGATGGCAGGGCATAGACTCAGG...AGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCCTCTGCCTGAGTCTATaGCCTGCCATCGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: CHRFHVQDLGNRKTHNHPLCLSL*PAIASM
Trigger: CATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAG...GGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp AGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCCTCTGCCTGAGTCTATaGCCTGCCATCGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: SLCPAIASMFRILGTERPLCLSL*PAIASM
Trigger: CATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAG...GGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACCTCCCCTTAGATACTCGAAAGTaGCTCTTCAGTGCCAAGATA +
Preference number: 4 (lower is better)
Translates to: LVAATGKTGPVALIFHLPLDTRK*LFSAKI
Trigger: TATCTTGGCACTGAAGAGGCACTTTCGAGTATCTAA...GGGGAGGTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp AACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCTTGCCGGGAAATAAGTaGGGGAATCGTCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: NGFLPQSSLPESMPCHRFLPGNK*GNRQSL
Trigger: CAAGCTCTGACGATTCCCGCACTTATTTCCCGGCAA...GAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp CTACAAATAGGGGTAGGAAACTTCATCCTCAGAGACTCTGGTCTCCTGGTGTCTCACGGGCACAGACGCTaGCATGGGAGCAACGTCATC +
Preference number: 4 (lower is better)
Translates to: LQIGVGNFILRDSGLLVSHGHRR*HGSNVI
Trigger: GATGACGTTGCTCCCATGGCAGCGTCTGTGCCCGTG...AGACACCAGGAGACCAGAGTCTCTGAGGATGAAGTTTCCTACCCCTATTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp ACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCTTCCGCTCCTTCAATTaGGAAGGGGATGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TISQGLGFEFSLHSSPFPFRSFN*EGDGGG
Trigger: CCCACCCCCATCCCCTTCCCAATTGAAGGAGCGGAA...GGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp ACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAGCAGCGGAGCAGGTTaGCTAGAGCCGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TCPVTQGLSSVHSKRGGASSGAG*LEPCFR
Trigger: CCTGAAACACGGCTCTAGCCAACCTGCTCCGCTGCT...TGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
CDS-3UTR CCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTTGGAGGACAATGCCCTaGTGGGCTGGAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLWRTMP*WAGGAG
Trigger: GCCAGCCCCTCCAGCCCACCAGGGCATTGTCCTCCA...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTGGGCATGACGGGCTaGAGGACAATGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SSVHSKRGGAKTDSSHNPLGMTG*RTMPWW
Trigger: CCACCAGGGCATTGTCCTCCAGCCCGTCATGCCCAG...AGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAGAGGCGCTGTTCAGCTaGCCCGCAACCCACGTTGAC +
Preference number: 4 (lower is better)
Translates to: VCPLFTQKEVEQKRIPPTEALFS*PATHVD
Trigger: GTCAACGTGGGTTGCGGGCCAGCTGAACAGCGCCTC...TGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCGGGCAGTACTCATGCTaGTATAGACTGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CPAIASMFRILGTERPTTGQYSC*YRLLGR
Trigger: CCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC...GGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTCCTCTCCTCCGGGCTaGGTCCCAGGAAGACACCTT +
Preference number: 4 (lower is better)
Translates to: FTQKEVEQKRIPPTILSASSPPG*VPGRHL
Trigger: AAGGTGTCTTCCTGGGACCCAGCCCGGAGGAGAGGA...GGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524669.5
3UTR CAA 72 bp AGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTaGGGAACAGAAAGACCCACAACCATCCCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SLCPAIASMFRI*GTERPTTIPFP
Trigger: GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTGGTCACAGCTGGGCATaGCGGGCTGGAGGACAATGC +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLGHSWA*RAGGQC
Trigger: GCATTGTCCTCCAGCCCGTCATGCCCAGCTGTGACC...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGTGTGTGACATTTCAATaGTGTATTTCCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: YSCWYRLLGRAVGREGHACVTFQ*CISLPC
Trigger: ACAAGGAAGGGAAATACATCATTGAAATGTCACACA...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAAGTTCTGTCTCTCCCTaGCTGCTGCCCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CPVTQGLSSVHSKRGGAKSSVSP*LLPTPE
Trigger: CTCAGGAGTGGGCAGCAGTCAGGGAGAGACAGAACT...TTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp ACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCACAATCCTCTCTGCCTaGGTCTATGCCCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: TISQGLGFEFSLHSSPFPTILSA*VYALPS
Trigger: CGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGT...GGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp AACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCATAAACAGTGATGCCTaGTGCTGCAGCCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: NGFLPQSSLPESMPCHRFINSDA*CCSQSC
Trigger: GCAACTTTGGCTGCAGCATCAGGCATCACTGTTTAT...GAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp TGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAAGCGGGGCAGATAGCTaGGGAAAGTCTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: CPVTQGLSSVHSKRGGAKSGADS*GKSWWG
Trigger: TCCCCACCAAGACTTTCCGCAGCTATCTGCCCCGCT...TTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAGGACACAGCTGTAAGTaGGGTGACAGCGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: CPVTQGLSSVHSKRGGAKGHSCK*GDSGAD
Trigger: ATCTGCCCCGCTGTCACCGCACTTACAGCTGTGTCC...TTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CACCCCACCCAATGGCAAAAGTTAGATACTCGAAAGTGCCTCTTCAGTGCCAAGCTCTGCCTGAGTCTATaGCCTGCCATCGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: HPTQWQKLDTRKCLFSAKLCLSL*PAIASM
Trigger: CATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAG...CTTGGCACTGAAGAGGCACTTTCGAGTATCTAACTTTTGCCATTGGGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp AACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCAAAGCCCATAAAGACTaGTTACTCTGGAAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: NGFLPQSSLPESMPCHRFKAHKD*LLWKQP
Trigger: CGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTT...GAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTCAGGCTTTGGGGGTCTaGACCAGCAGCAAAACAATA +
Preference number: 4 (lower is better)
Translates to: GGAKTDSSHNPLCLSLCPQALGV*TSSKTI
Trigger: TATTGTTTTGCTGCTGGTGCAGACCCCCAAAGCCTG...AGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp TCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGAGTTCCCCTCTGACATaGACCACCTTGAAACACCTT +
Preference number: 4 (lower is better)
Translates to: SHNPLCLSLCPAIASMFRSSPLT*TTLKHL
Trigger: AAGGTGTTTCAAGGTGGTGCATGTCAGAGGGGAACT...CCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp AAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATCCACCTTTCAGTCTCTaGTTCACAGGTTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KVSFAGGSHGKDWPRSTDPPFSL*FTGLPS
Trigger: TGAAGGCAAACCTGTGAAGCAGAGACTGAAAGGTGG...ATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp TTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCTACAGAAACGGGCCCTCCTTaGCAAGAGACCACCTTTCAG +
Preference number: 4 (lower is better)
Translates to: FPRAWDLSFPCTQVLFPTETGPP*QETTFQ
Trigger: CTGAAAGGTGGTCTCTTGGCAAGGAGGGCCCGTTTC...TGTAGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp TTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTTCCGCTCCTTCAATTaGGAAGGGGATGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FTQKEVEQKRIPPTILSAFRSFN*EGDGGG
Trigger: CCCACCCCCATCCCCTTCCCAATTGAAGGAGCGGAA...GGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTGCCCAGCAGCGGAGCAGGTTaGCTAGAGCCGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SNPSLFSSAVLWSMIYLPSSGAG*LEPCFR
Trigger: CCTGAAACACGGCTCTAGCCAACCTGCTCCGCTGCT...GGGCAAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
CDS-3UTR CCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTGAGGCGCTGTTCAGCTaGCCCGCAACCCACGTTGAC +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLEALFS*PATHVD
Trigger: GTCAACGTGGGTTGCGGGCCAGCTGAACAGCGCCTC...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp ACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTTCATCTGCTGTTCTGTaGTCCATGATCTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: TKVSFAGGSHGKDWPRSTSSAVL*SMIYLP
Trigger: GGGCAAGTAGATCATGGACCACAGAACAGCAGATGA...AGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp AACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCGAGACTCTGGTCTCCTaGTGTCTGAGACCAGAATTT +
Preference number: 4 (lower is better)
Translates to: NGFLPQSSLPESMPCHRFETLVS*CLRPEF
Trigger: AAATTCTGGTCTCAGACACCAGGAGACCAGAGTCTC...GAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp ATCTACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGCCCAGGAGCAGTGACTaGGCCTCAGAGAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: IYLPCDPRFVLCSLKKRWPRSSD*ASEKAH
Trigger: ATGGGCTTTCTCTGAGGCCCAGTCACTGCTCCTGGG...CCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGTAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TTTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTTCCCCTCCAGGGGACTaGGTCCCAGGAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: FTISQGLGFEFSLHSSPFSPPGD*VPGAVT
Trigger: AGTCACTGCTCCTGGGACCCAGTCCCCTGGAGGGGA...AAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCAGCCACGGGAAAGACTaGCCCCGTAGCACTGATTTT +
Preference number: 4 (lower is better)
Translates to: PAIASMFRILGTERPTTISHGKD*PRSTDF
Trigger: AAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCT...GATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp AGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCAGCCACGGGAAAGACTaGCCCCGTAGCACTGATTTT +
Preference number: 4 (lower is better)
Translates to: SLCPAIASMFRILGTERPSHGKD*PRSTDF
Trigger: AAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCT...GGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp AAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATAAAAGTTTCATTCGCTaGTGGCAGCCACGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KVSFAGGSHGKDWPRSTDKSFIR*WQPRER
Trigger: TCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTT...ATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCGAGAATGGGGCAGCTTaGGTCCCCAATCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LLVSETRISLQPKSFLICENGAA*VPNPEL
Trigger: GAGCTCAGGATTGGGGACCCAAGCTGCCCCATTCTC...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp CATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCAGTTCTTCTTCAAGGGGCATaGAGAATGGGGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: HVQDLGNRKTHNHPFPPVLLQGA*RMGQLG
Trigger: CCCAAGCTGCCCCATTCTCCATGCCCCTTGAAGAAG...AACTGGGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCCCATTCTCGCACCTTaGTTCACTCATTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ASMFRILGTERPTTIPFPPILAP*FTHSGP
Trigger: TGGGCCAGAATGAGTGAACCAAGGTGCGAGAATGGG...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp CTACAAATAGGGGTAGGAAACTTCATCCTCAGAGACTCTGGTCTCCTGGTGTCTACAATCCTCTCTGCCTaGGTCTATGCCCTGCCATCG +
Preference number: 4 (lower is better)
Translates to: LQIGVGNFILRDSGLLVSTILSA*VYALPS
Trigger: CGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGT...AGACACCAGGAGACCAGAGTCTCTGAGGATGAAGTTTCCTACCCCTATTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp CTACAAATAGGGGTAGGAAACTTCATCCTCAGAGACTCTGGTCTCCTGGTGTCTCCAGGGCCTGGGATTTaGGTTTTCCCTGCACTCAAG +
Preference number: 4 (lower is better)
Translates to: LQIGVGNFILRDSGLLVSPGPGI*VFPALK
Trigger: CTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGG...AGACACCAGGAGACCAGAGTCTCTGAGGATGAAGTTTCCTACCCCTATTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTGCCCCCAGGGCCTGGGATTTaGGTTTTCCCTGCACTCAAG +
Preference number: 4 (lower is better)
Translates to: SNPSLFSSAVLWSMIYLPPGPGI*VFPALK
Trigger: CTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGG...GGGCAAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TCAAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAGGCTGTGTGGTAGGGTaGGAGCAACGGCCACAACGA +
Preference number: 4 (lower is better)
Translates to: SSTLCIIQKFHSLVAATGGCVVG*EQRPQR
Trigger: TCGTTGTGGCCGTTGCTCTCACCCTACCACACAGCC...TCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp CCCACCCAATGGCAAAAGTTAGATACTCGAAAGTGCCTCTTCAGTGCCAAGATACATGCTGGTATAGACTaGTTGGCAGGGCCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PTQWQKLDTRKCLFSAKIHAGID*LAGPWG
Trigger: TCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATG...TATCTTGGCACTGAAGAGGCACTTTCGAGTATCTAACTTTTGCCATTGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp ACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCGTGGGGCAGTACTCATaGTGGTATAGACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TISQGLGFEFSLHSSPFPVGQYS*WYRLLG
Trigger: GCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC...GGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp ACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAGTGGGGCAGTACTCATaGTGGTATAGACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TCPVTQGLSSVHSKRGGAVGQYS*WYRLLG
Trigger: GCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC...TGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCCCTGTTCTAAAGGGTaGCTGGTAGTGGATATGGTG +
Preference number: 4 (lower is better)
Translates to: ASMFRILGTERPTTIPFPPCSKG*LVVDMV
Trigger: CACCATATCCACTACCAGGCACCCTTTAGAACAGGG...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCAGTTTGCTGCAGCCAAAGTTaGCGGGAAATAAGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: HVQDLGNRKTHNHPFPPVCCSQS*REISAG
Trigger: TCCCGCACTTATTTCCCGGCAACTTTGGCTGCAGCA...AACTGGGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp AACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCATGGATTTTCTCATCTaGTCTGAGGTTTTGGCACCC +
Preference number: 4 (lower is better)
Translates to: NGFLPQSSLPESMPCHRFMDFLI*SEVLAP
Trigger: GGGTGCCAAAACCTCAGAGCAGATGAGAAAATCCAT...GAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp CACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCCCTTCCTTGTACTTCTaGCTCGTCTCAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: HNPLCLSLCPAIASMFRIPSLYF*LVSKAC
Trigger: GCAAGCTTTTGAGACGAGCCAGAAGTACAAGGAAGG...GATCCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCTACAGGGCAGTACTCATGCTaGTATAGACTGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FPRAWDLSFPCTQVLFPTGQYSC*YRLLGR
Trigger: CCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC...TGTAGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCCTATTTCCCAGGGCCTaGGATTTGAGTTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: CHRFHVQDLGNRKTHNHPLFPRA*DLSFPC
Trigger: GCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAG...GGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCTACAAGTTTCATTCGCTGGTaGCAGCCACGGGAAAGACTG +
Preference number: 4 (lower is better)
Translates to: FPRAWDLSFPCTQVLFPTSFIRW*QPRERL
Trigger: CAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACT...TGTAGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTAGCAGCGGAGCAGGTTaGCTTGAGGTCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSVHSKRGGAKTDSSHNPSSGAG*LEVCSR
Trigger: TCTGGAGCAGACCTCAAGCCAACCTGCTCCGCTGCT...AGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTGAAGTGAGACGGGGCTaGACCGTAGGAGAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: SSVHSKRGGAKTDSSHNPEVRRG*TVGERG
Trigger: TCCCCTTTCTCCTACGGTCCAGCCCCGTCTCACTTC...AGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCGAGAAGAGGCAGTGTTaGCTCTGGTTAGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLVSETRISLQPKSFLICEKRQC*LWLARA
Trigger: TGCCCTGGCTAACCAGAGCCAACACTGCCTCTTCTC...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp ATCTACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCCTGTGGGCCCCTTaGTCTTTCTCTCTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: IYLPCDPRFVLCSLKKRWSLWAP*SFSLLV
Trigger: GACTAGGAGAGAGAAAGACCAAGGGGCCCACAGGCT...CCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGTAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp CACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCCAAAACAATAAACAGTaGTGCCTGATGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HNPLCLSLCPAIASMFRIQNNKQ*CLMLQP
Trigger: TGGCTGCAGCATCAGGCATCACTGTTTATTGTTTTG...GATCCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp AAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGGAGAGATGTTCCCCTaGAGTGAGACGGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KHFMYHTKVSFAGGSHGKGEMFP*SETGLD
Trigger: GTCCAGCCCCGTCTCACTTCAGGGGAACATCTCTCC...TTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp ACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCATTTCTTCAGGCAATCTaGCAGCTGGAGCCAATGGGA +
Preference number: 4 (lower is better)
Translates to: TCPVTQGLSSVHSKRGGAFLQAI*QLEPMG
Trigger: TCCCATTGGCTCCAGCTGTCAGATTGCCTGAAGAAA...TGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp CTACAAATAGGGGTAGGAAACTTCATCCTCAGAGACTCTGGTCTCCTGGTGTCTGTTTTCAGTTCTTCGTaGGGCTCTGCATCGCACAGG +
Preference number: 4 (lower is better)
Translates to: LQIGVGNFILRDSGLLVSVFSSS*GSASHR
Trigger: CCTGTGCGATGCAGAGCCTCACGAAGAACTGAAAAC...AGACACCAGGAGACCAGAGTCTCTGAGGATGAAGTTTCCTACCCCTATTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTAGCGGGGCAGATAGCTaGGGAAAGTCTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLSGADS*GKSWWG
Trigger: TCCCCACCAAGACTTTCCGCAGCTATCTGCCCCGCT...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAGTGGGGCAGTACTCATaGTGGTATAGACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: CPVTQGLSSVHSKRGGAKVGQYS*WYRLLG
Trigger: GCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC...TTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCCCTGAGTCTATGCCCTaGCATCGCTTCCATGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLVSETRISLQPKSFLICPESMP*HRFHVQ
Trigger: CTGAACATGGAAGCGATGGCAGGGCATAGACTCAGG...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCGATTTGAGTTTTCCCTaGACTCAAGTCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SSHNPLCLSLCPAIASMFDLSFP*TQVLFP
Trigger: AGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATC...GAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCAAAGCCCATAAAGACTaGTTACTCTGGAAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ASMFRILGTERPTTIPFPKAHKD*LLWKQP
Trigger: CGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTT...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCAGTCTTTACTAACTGTTaGCTTAGCCCTTGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: SFAGGSHGKDWPRSTDFPVFTNC*LSPWLK
Trigger: CTTTAACCAAGGGCTAAGGCAACAGTTAGTAAAGAC...TGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCTTCTTCGTGAGGCTCTaGATCGCACAGGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: LLVSETRISLQPKSFLICFFVRL*IAQALC
Trigger: ACACAGTGCCTGTGCGATGCAGAGCCTCACGAAGAA...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTAGCAGCGGAGCAGGTTaGCTAGAGCCGTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLSSGAG*LEPCFR
Trigger: CCTGAAACACGGCTCTAGCCAACCTGCTCCGCTGCT...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
CDS-3UTR CCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTATGTCAGCTACCGAGTaGAGCCCCGTGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLMSATE*SPVSKR
Trigger: CCTCTTGCTCACGGGGCTCCACTCGGTAGCTGACAT...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCAAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGACCCAGGAGCAGTGACTaGGCCTCAGAGAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: SSTLCIIQKFHSLVAATGPRSSD*ASEKAH
Trigger: ATGGGCTTTCTCTGAGGCCCAGTCACTGCTCCTGGG...TCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp ATCTACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGTTTCATTCGCTGGTaGCAGCCACGGGAAAGACTG +
Preference number: 4 (lower is better)
Translates to: IYLPCDPRFVLCSLKKRWSFIRW*QPRERL
Trigger: CAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACT...CCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGTAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCAAAAGTTTCATTCGCTaGTGGCAGCCACGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: ASMFRILGTERPTTIPFPKSFIR*WQPRER
Trigger: TCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTT...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCAGGCAGTGTTGGCTCTaGTTAGCCAGGGCATACAGG +
Preference number: 4 (lower is better)
Translates to: LLFPRAWDLSFPCTQVLFRQCWL*LARAYR
Trigger: CCTGTATGCCCTGGCTAACCAGAGCCAACACTGCCT...GAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp TGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCACAGCAGTGACTCTGTaGGTGACTGAAGATGAAGTA +
Preference number: 4 (lower is better)
Translates to: CPAIASMFRILGTERPTTTAVTL*VTEDEV
Trigger: TACTTCATCTTCAGTCACCCACAGAGTCACTGCTGT...GGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp ATCTACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGGGAGCCAATGGGAAATaGGTAGCATGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IYLPCDPRFVLCSLKKRWGANGK*VACQRS
Trigger: GCTCCTCTGACATGCTACCCATTTCCCATTGGCTCC...CCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGTAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp ACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCAGGCAATCTGACAGCTaGAGCCAATGGGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: TISQGLGFEFSLHSSPFPRQSDS*SQWEMG
Trigger: ACCCATTTCCCATTGGCTCCAGCTGTCAGATTGCCT...GGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp TCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTGTTCTGTGGTCCATaGTCTACTTGCCCTGTGACC +
Preference number: 4 (lower is better)
Translates to: SSVHSKRGGAKTDSSHNPLFCGP*STCPVT
Trigger: GGTCACAGGGCAAGTAGATCATGGACCACAGAACAG...AGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp GTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATCTGTTCTGTGGTCCATaGTCTACTTGCCCTGTGACC +
Preference number: 4 (lower is better)
Translates to: VTQGLSSVHSKRGGAKTDLFCGP*STCPVT
Trigger: GGTCACAGGGCAAGTAGATCATGGACCACAGAACAG...ATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCAGTCACCTTGAGGTCTaGTCCAGAGATCTCCGTCTA +
Preference number: 4 (lower is better)
Translates to: LLVSETRISLQPKSFLICSHLEV*SRDLRL
Trigger: TAGACGGAGATCTCTGGAGCAGACCTCAAGGTGACT...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300022.8
ENST00000532314.5
CDS-3UTR GCA 90 bp AAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAAGCGGGGCAGATAGCTaGGGAAAGTCTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KHFMYHTKVSFAGGSHGKSGADS*GKSWWG
Trigger: TCCCCACCAAGACTTTCCGCAGCTATCTGCCCCGCT...TTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCTCGTCTCAAAAGCTTaGTCATATTTCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ASMFRILGTERPTTIPFPLVSKA*SYFQPS
Trigger: ACTGGGCTGGAAATATGAGCAAGCTTTTGAGACGAG...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TCAAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGATCCCACAATCCTCTCTaGCTGAGTCTATGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSTLCIIQKFHSLVAATGSHNPL*LSLCPA
Trigger: GGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA...TCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTTCCCACAATCCTCTCTaGCTGAGTCTATGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLSHNPL*LSLCPA
Trigger: GGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TCAAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAGTCTGGTTCAGAGATaGCAGCTGGGCACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSTLCIIQKFHSLVAATGSLVQR*QLGTLA
Trigger: TGCCAGAGTGCCCAGCTGGCATCTCTGAACCAGACT...TCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTCCCAGAATAAGCACCTaGCTGTCTTCCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLPRIST*LSSQPV
Trigger: CACAGGCTGGGAAGACAGGCAGGTGCTTATTCTGGG...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp CTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCGGCCATGGCTCCCTTaGAAGGACTTGGAAATAAGC +
Preference number: 4 (lower is better)
Translates to: LCSLKKRWSKNGFLPQSSRPWLP*KDLEIS
Trigger: GCTTATTTCCAAGTCCTTCCAAGGGAGCCATGGCCG...AGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCGGCCATGGCTCCCTTaGAAGGACTTGGAAATAAGC +
Preference number: 4 (lower is better)
Translates to: SSVHSKRGGAKTDSSHNPRPWLP*KDLEIS
Trigger: GCTTATTTCCAAGTCCTTCCAAGGGAGCCATGGCCG...AGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534810.3
CDS-3UTR CCA 90 bp ACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCACCTTCCTTGTACTTCTaGCTCGTCTCAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TCPVTQGLSSVHSKRGGAPSLYF*LVSKAC
Trigger: GCAAGCTTTTGAGACGAGCCAGAAGTACAAGGAAGG...TGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CCCACCCAATGGCAAAAGTTAGATACTCGAAAGTGCCTCTTCAGTGCCAAGATAGGGCAGTACTCATGCTaGTATAGACTGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PTQWQKLDTRKCLFSAKIGQYSC*YRLLGR
Trigger: CCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCC...TATCTTGGCACTGAAGAGGCACTTTCGAGTATCTAACTTTTGCCATTGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCTACATCATCTGCTGTTCTGTaGTCCATGATCTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: FPRAWDLSFPCTQVLFPTSSAVL*SMIYLP
Trigger: GGGCAAGTAGATCATGGACCACAGAACAGCAGATGA...TGTAGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp CTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTAGCCACGGGAAAGACTaGCCCCGTAGCACTGATTTT +
Preference number: 4 (lower is better)
Translates to: LCSLKKRWSKNGFLPQSSSHGKD*PRSTDF
Trigger: AAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCT...AGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCAAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGACTTCCCAGCCCACTGTaGGTGGTTAGCCTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SSTLCIIQKFHSLVAATGLPSPL*VVSLSL
Trigger: CAGACTTAGGCTAACCACCCACAGTGGGCTGGGAAG...TCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp AAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAACTGCTCTGGCAAACCTaGCAGCCGATCCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KHFMYHTKVSFAGGSHGKLLWQT*QPIQAS
Trigger: AGAAGCCTGGATCGGCTGCCAGGTTTGCCAGAGCAG...TTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
3UTR CAA 72 bp CTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTaGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTC +
Preference number: 4 (lower is better)
Translates to: LFSSAVLWSMIY*PCDPRFVLCSL
Trigger: GAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCTGGTCTCCTGGTGTCTaGGACCAGAATTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: LLFPRAWDLSFPCTQVLFWSPGV*DQNFTP
Trigger: TGGAGTGAAATTCTGGTCTCAGACACCAGGAGACCA...GAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp ATTTCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACCAGGGCCTGGGATTTaGGTTTTCCCTGCACTCAAG +
Preference number: 4 (lower is better)
Translates to: ISLQPKSFLICCSVVHDLPGPGI*VFPALK
Trigger: CTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGG...TAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp GACTGGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTGTAATTGCTGGGTTCTaGTTAGGAATAGAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: DWASEKAHKDCLLWKQPTVIAGF*LGIEED
Trigger: ATCTTCCTCTATTCCTAATCAGAACCCAGCAATTAC...AGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp CTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTAGTCACCTTGAGGTCTaGTCCAGAGATCTCCGTCTA +
Preference number: 4 (lower is better)
Translates to: LCSLKKRWSKNGFLPQSSSHLEV*SRDLRL
Trigger: TAGACGGAGATCTCTGGAGCAGACCTCAAGGTGACT...AGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300022.8
ENST00000532314.5
CDS-3UTR GCA 90 bp ACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCAGCCCAGTGTGGTTTTaGAGCTCTCACAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: TISQGLGFEFSLHSSPFPSPVWF*SSHRKC
Trigger: ACATTTTCTGTGAGAGCTGCAAAACCACACTGGGCT...GGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCAGTTCTCGTCTCAAAAGCTTaGTCATATTTCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: HVQDLGNRKTHNHPFPPVLVSKA*SYFQPS
Trigger: ACTGGGCTGGAAATATGAGCAAGCTTTTGAGACGAG...AACTGGGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TTTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCTGAGTCTATGCCCTaGCATCGCTTCCATGTTCAG +
Preference number: 4 (lower is better)
Translates to: FTISQGLGFEFSLHSSPFPESMP*HRFHVQ
Trigger: CTGAACATGGAAGCGATGGCAGGGCATAGACTCAGG...AAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCGATTTGAGTTTTCCCTaGACTCAAGTCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ASMFRILGTERPTTIPFPDLSFP*TQVLFP
Trigger: AGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATC...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTGCCCAAAGCCCATAAAGACTaGTTACTCTGGAAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SNPSLFSSAVLWSMIYLPKAHKD*LLWKQP
Trigger: CGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTT...GGGCAAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCTCTGCTTCACAGGTTTaGCTTCAACTTTGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LLVSETRISLQPKSFLICSASQV*LQLCQR
Trigger: TCGCTGGCAAAGTTGAAGGCAAACCTGTGAAGCAGA...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCCCTTCCTTGTACTTCTaGCTCGTCTCAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LLVSETRISLQPKSFLICPSLYF*LVSKAC
Trigger: GCAAGCTTTTGAGACGAGCCAGAAGTACAAGGAAGG...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAGAGACTCTGGTCTCCTaGTGTCTGAGACCAGAATTT +
Preference number: 4 (lower is better)
Translates to: CPVTQGLSSVHSKRGGAKETLVS*CLRPEF
Trigger: AAATTCTGGTCTCAGACACCAGGAGACCAGAGTCTC...TTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTATTTCCCAGGGCCTaGGATTTGAGTTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SSVHSKRGGAKTDSSHNPLFPRA*DLSFPC
Trigger: GCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAG...AGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCAAAAGTTTCATTCGCTaGTGGCAGCCACGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: FTQKEVEQKRIPPTILSAKSFIR*WQPRER
Trigger: TCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTT...GGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTTGGTCTCCTGGTGTCTaGGACCAGAATTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLWSPGV*DQNFTP
Trigger: TGGAGTGAAATTCTGGTCTCAGACACCAGGAGACCA...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CTACAAATAGGGGTAGGAAACTTCATCCTCAGAGACTCTGGTCTCCTGGTGTCTAGCCCAGTGTGGTTTTaGAGCTCTCACAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: LQIGVGNFILRDSGLLVSSPVWF*SSHRKC
Trigger: ACATTTTCTGTGAGAGCTGCAAAACCACACTGGGCT...AGACACCAGGAGACCAGAGTCTCTGAGGATGAAGTTTCCTACCCCTATTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp CATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCAGTTGATTTGAGTTTTCCCTaGACTCAAGTCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: HVQDLGNRKTHNHPFPPVDLSFP*TQVLFP
Trigger: AGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATC...AACTGGGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCCCTACAGATTTGAGTTTTCCCTaGACTCAAGTCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: FPRAWDLSFPCTQVLFPTDLSFP*TQVLFP
Trigger: AGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATC...TGTAGGGAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TCAAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGCCAAGGAAAGGCTaGACAGAAGGCCAGAGAATC +
Preference number: 4 (lower is better)
Translates to: SSTLCIIQKFHSLVAATGKPRKG*TEGQRI
Trigger: GATTCTCTGGCCTTCTGTGCAGCCTTTCCTTGGCTT...TCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp TTTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTAAGCAGGTGAGCTGCTaGTTTCTCCTTCATAGGGCT +
Preference number: 4 (lower is better)
Translates to: FTISQGLGFEFSLHSSPFKQVSC*FLLHRA
Trigger: AGCCCTATGAAGGAGAAAGCAGCAGCTCACCTGCTT...AAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp TTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCGATAAGCAGGTGAGCTaGTGCTTTCTCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: LLFPRAWDLSFPCTQVLFDKQVS*CFLLHR
Trigger: CCTATGAAGGAGAAAGCAGCAGCTCACCTGCTTATC...GAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp CTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTTCATCTGCTGTTCTGTaGTCCATGATCTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: LCSLKKRWSKNGFLPQSSSSAVL*SMIYLP
Trigger: GGGCAAGTAGATCATGGACCACAGAACAGCAGATGA...AGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTCTATTTCCCAGGGCCTaGGATTTGAGTTTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLLFPRA*DLSFPC
Trigger: GCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAG...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp AAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAAGTTTCATTCGCTGGTaGCAGCCACGGGAAAGACTG +
Preference number: 4 (lower is better)
Translates to: KHFMYHTKVSFAGGSHGKSFIRW*QPRERL
Trigger: CAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACT...TTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp TCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTGACACCTGCTCACAATaGATTTTCTCATCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSVHSKRGGAKTDSSHNPDTCSQ*IFSSAL
Trigger: CAGAGCAGATGAGAAAATCCATTGTGAGCAGGTGTC...AGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTTTGGTTCACTCATTCTaGCCCAGAATAAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLLVHSF*PRISTC
Trigger: GCAGGTGCTTATTCTGGGCCAGAATGAGTGAACCAA...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp ACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCATGTGTGACATTTCAATaGTGTATTTCCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TCPVTQGLSSVHSKRGGACVTFQ*CISLPC
Trigger: ACAAGGAAGGGAAATACATCATTGAAATGTCACACA...TGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTAGAGTTGGGGATGCCTaGAGGTCTTTCTTTTACATG +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLRVGDA*RSFFYM
Trigger: CATGTAAAAGAAAGACCTTCAGGCATCCCCAACTCT...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR GCA 90 bp TTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTTAGATACTCGAAAGTaGCTCTTCAGTGCCAAGATA +
Preference number: 4 (lower is better)
Translates to: FTQKEVEQKRIPPTILSALDTRK*LFSAKI
Trigger: TATCTTGGCACTGAAGAGGCACTTTCGAGTATCTAA...GGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp ATTTCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTAAAAGCCCATAAAGACTaGTTACTCTGGAAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ISLQPKSFLICCSVVHDLKAHKD*LLWKQP
Trigger: CGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTT...TAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp AAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAATCATCTGCTGTTCTGTaGTCCATGATCTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: KHFMYHTKVSFAGGSHGKSSAVL*SMIYLP
Trigger: GGGCAAGTAGATCATGGACCACAGAACAGCAGATGA...TTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp ATTTCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTAGAGACTCTGGTCTCCTaGTGTCTGAGACCAGAATTT +
Preference number: 4 (lower is better)
Translates to: ISLQPKSFLICCSVVHDLETLVS*CLRPEF
Trigger: AAATTCTGGTCTCAGACACCAGGAGACCAGAGTCTC...TAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp ATTTCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTAAGCCCAGTGTGGTTTTaGAGCTCTCACAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: ISLQPKSFLICCSVVHDLSPVWF*SSHRKC
Trigger: ACATTTTCTGTGAGAGCTGCAAAACCACACTGGGCT...TAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CCA 90 bp ATTTCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACAGGGAGAAGCAAGTTaGGCAAATGACTGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: ISLQPKSFLICCSVVHDLQGEAS*ANDWRK
Trigger: TTTTCTCCAGTCATTTGCCCAACTTGCTTCTCCCTG...TAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR TCA 90 bp GTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACATGTGTGACATTTCAATaGTGTATTTCCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VCPLFTQKEVEQKRIPPTCVTFQ*CISLPC
Trigger: ACAAGGAAGGGAAATACATCATTGAAATGTCACACA...TGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR GCA 90 bp TTTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTTTAGATACTCGAAAGTaGCTCTTCAGTGCCAAGATA +
Preference number: 4 (lower is better)
Translates to: FTISQGLGFEFSLHSSPFLDTRK*LFSAKI
Trigger: TATCTTGGCACTGAAGAGGCACTTTCGAGTATCTAA...AAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TTTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTTGTGTGACATTTCAATaGTGTATTTCCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: FTISQGLGFEFSLHSSPFCVTFQ*CISLPC
Trigger: ACAAGGAAGGGAAATACATCATTGAAATGTCACACA...AAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR TCA 90 bp TCACTCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTTGTGTGACATTTCAATaGTGTATTTCCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLQPKSFLICCSVVHDLLCVTFQ*CISLPC
Trigger: ACAAGGAAGGGAAATACATCATTGAAATGTCACACA...AAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS CCA 90 bp GGGCATGACGGGCTGGAGGACAATGCCCTGGTGGGCTGGAGGGGCTaGCGCCGTGCAGCCCCCGCAGAGACGGTCGCAGGTGAAGCAGCG +
Preference number: 5 (lower is better)
Translates to: GHDGLEDNALVGWRG*RRAAPAETVAGEAA
Trigger: CGCTGCTTCACCTGCGACCGTCTCTGCGGGGGCTGCACGGCGCCAGCCCCTCCAGCCCACCAGGGCATTGTCCTCCAGCCCGTCATGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300022.8
ENST00000524592.1
ENST00000524669.5
ENST00000528797.5
ENST00000529776.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS TCA 90 bp CTGGAGGGGCTGGCGCCGTGCAGCCCCCGCAGAGACGGTCGCAGGTaGAGCAGCGGAGCAGGTTGGCTAGAGCCGTGTTTCAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: LEGLAPCSPRRDGRR*SSGAGWLEPCFRAG
Trigger: TCCTGCCCTGAAACACGGCTCTAGCCAACCTGCTCCGCTGCTTCACCTGCGACCGTCTCTGCGGGGGCTGCACGGCGCCAGCCCCTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300022.8
ENST00000524592.1
ENST00000524669.5
ENST00000528797.5
ENST00000532314.5
ENST00000534711.5
CDS TCA 90 bp CTGGAGGGGCTGGCGCCGTGCAGCCCCCGCAGAGACGGTCGCAGGTaGAGCAGCGGAGCAGGTTGGCTTGAGGTCTGCTCCAGAGATCTC +
Preference number: 5 (lower is better)
Translates to: LEGLAPCSPRRDGRR*SSGAGWLEVCSRDL
Trigger: GAGATCTCTGGAGCAGACCTCAAGCCAACCTGCTCCGCTGCTTCACCTGCGACCGTCTCTGCGGGGGCTGCACGGCGCCAGCCCCTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529776.5
ENST00000534810.3
CDS-3UTR CAA 90 bp GGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGGCTGGTATAGACTGCTaGGCAGGGCCGTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: GWGSTHAGIDCLAGPWGGAGIDC*AGPWGG
Trigger: CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGC...CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CAA 90 bp GGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCCCCCACAGCATCCAGTaGCATTGTCGCCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GSTHAGIDCLAGPWGGRGPHSIQ*HCRPVP
Trigger: GGGGACAGGGCGACAATGCAACTGGATGCTGTGGGG...GCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000534711.5
CDS CCA 90 bp TGGTTAGCCAGGGCATACAGGCTCTCCTCGTCCTGTCCTCCGCAGTaGCCACAGGCACCCAGCTGTTCCACTCTCTCTGAAGGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: WLARAYRLSSSCPPQ*PQAPSCSTLSEGRQ
Trigger: CTGGCGGCCTTCAGAGAGAGTGGAACAGCTGGGTGCCTGTGGCCACTGCGGAGGACAGGACGAGGAGAGCCTGTATGCCCTGGCTAACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000531442.1
CDS CCA 90 bp CATTGTCGCCCTGTCCCCTGGATCCCCATTCTGCTCTGGCAAACCTaGCAGCCGATCCAGGCTTCTGGCGCCAAAGCCAGGGAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: HCRPVPWIPILLWQT*QPIQASGAKARESV
Trigger: CACCGACTCCCTGGCTTTGGCGCCAGAAGCCTGGATCGGCTGCCAGGTTTGCCAGAGCAGAATGGGGATCCAGGGGACAGGGCGACAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CCA 90 bp GTCAGCTACCGAGTGGAGCCCCGTGAGCAAGAGGCGCTGTTCAGCTaGCCCGCAACCCACGTTGACCACGGAGTTAAACAGGTAGGCTCG +
Preference number: 5 (lower is better)
Translates to: VSYRVEPREQEALFS*PATHVDHGVKQVGS
Trigger: CGAGCCTACCTGTTTAACTCCGTGGTCAACGTGGGTTGCGGGCCAGCTGAACAGCGCCTCTTGCTCACGGGGCTCCACTCGGTAGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534711.5
ENST00000534810.3
CDS CCA 90 bp GTCAGCTACCGAGTGGAGCCCCGTGAGCAAGAGGCGCTGTTCAGCTaGCCCGCAACCCACGTTGACCCTGTCTCAGGAAACAGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: VSYRVEPREQEALFS*PATHVDPVSGNRKD
Trigger: GTCCTTCCTGTTTCCTGAGACAGGGTCAACGTGGGTTGCGGGCCAGCTGAACAGCGCCTCTTGCTCACGGGGCTCCACTCGGTAGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524592.1
ENST00000528797.5
CDS-3UTR CAA 90 bp GGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCAAGCAGCGGAGCAGGTaGGCTAGAGCCGTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: GSTHAGIDCLAGPWGGRGKQRSR*ARAVFQ
Trigger: CTGAAACACGGCTCTAGCCAACCTGCTCCGCTGCTT...GCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
CDS CCA 90 bp CCAGGCTTCTGGCGCCAAAGCCAGGGAGTCGGTGTTTCTCCCTCCTaGGGCAGAAGCAGCCTCCACCATTTTCCACAGAGAGAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: PGFWRQSQGVGVSPS*GRSSLHHFPQREAH
Trigger: GTGGGCTTCTCTCTGTGGAAAATGGTGGAGGCTGCTTCTGCCCCAGGAGGGAGAAACACCGACTCCCTGGCTTTGGCGCCAGAAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524669.5
ENST00000528797.5
ENST00000533025.1
CDS CCA 90 bp ATCCAGTTGCATTGTCGCCCTGTCCCCTGGATCCCCATTCTGCTCTaGCAAACCTGGCAGCCGATCCAGGCTTCTGGCGCCAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: IQLHCRPVPWIPILL*QTWQPIQASGAKAR
Trigger: CCTGGCTTTGGCGCCAGAAGCCTGGATCGGCTGCCAGGTTTGCCAGAGCAGAATGGGGATCCAGGGGACAGGGCGACAATGCAACTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000534711.5
CDS-3UTR CAA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGTTTCCGCTCCTTCAATaGGGAAGGGGATGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: YSCWYRLLGRAVGREGHAFPLLQ*GRGWGW
Trigger: CCACCCCCATCCCCTTCCCAATTGAAGGAGCGGAAA...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CCAGGGGTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGATAAGCTCATCGTGTTaGGCCAGGTGTGCACGGCAG +
Preference number: 5 (lower is better)
Translates to: PGVGQYSCWYRLLGRAVGISSSC*ARCARQ
Trigger: CTGCCGTGCACACCTGGCCAAACACGATGAGCTTAT...CCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CAA 90 bp GACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCCCGGCCCGCAACCCACGTaGACCCTTGGAAATAAGCTC +
Preference number: 5 (lower is better)
Translates to: DCLLWKQPTRGCSASSCPGPQPT*TLGNKL
Trigger: GAGCTTATTTCCAAGGGTCAACGTGGGTTGCGGGCC...GGGACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532314.5
CDS-3UTR CAA 90 bp TACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGGGGCATGCGATAAGCTCATCGTGTTaGGCCAGGTGTGCACGGCAG +
Preference number: 5 (lower is better)
Translates to: YSCWYRLLGRAVGREGHAISSSC*ARCARQ
Trigger: CTGCCGTGCACACCTGGCCAAACACGATGAGCTTAT...CGCATGCCCCTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS GCA 90 bp AGGAAGACACCTTGGGCTGAGTTCAGGGTGACATTGGGCTCCGGCTaGAGGAAACGGGCCCTCCTTGCCAAGAGACCACCTTTCAGTCTC +
Preference number: 5 (lower is better)
Translates to: RKTPWAEFRVTLGSG*RKRALLAKRPPFSL
Trigger: GAGACTGAAAGGTGGTCTCTTGGCAAGGAGGGCCCGTTTCCTGCAGCCGGAGCCCAATGTCACCCTGAACTCAGCCCAAGGTGTCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS GCA 90 bp GCCCACGGGCACAGACGCTGCCATGGGAGCAACGTCATCTGCAAGTaGCCTCTCCTTGGTTTTCAGTTCTTCGTGAGGCTCTGCATCGCA +
Preference number: 5 (lower is better)
Translates to: AHGHRRCHGSNVICK*PLLGFQFFVRLCIA
Trigger: TGCGATGCAGAGCCTCACGAAGAACTGAAAACCAAGGAGAGGGCACTTGCAGATGACGTTGCTCCCATGGCAGCGTCTGTGCCCGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000533025.1
CDS-3UTR CAA 90 bp GTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGTCGGCCATGGCTCCCTaGGAAGGACTTGGAAATAAG +
Preference number: 5 (lower is better)
Translates to: VGQYSCWYRLLGRAVGRESAMAP*EGLGNK
Trigger: CTTATTTCCAAGTCCTTCCAAGGGAGCCATGGCCGA...CTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGCTGGTATAGACTGCTaGGCAGGGCCGTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PQRKPIKTAYSGSSRLGAAGIDC*AGPWGG
Trigger: CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGC...AGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp GGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCTGGTATAGACTGCTaGGCAGGGCCGTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: GGAKTDSSHNPLCLSLCPAGIDC*AGPWGG
Trigger: CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGC...AGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCTCCCAGGGCAGGCTTaGGGGGTCTGCACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PAIASMFRILGTERPTTILPGQA*GVCTSS
Trigger: GCTGCTGGTGCAGACCCCCAAAGCCTGCCCTGGGAG...GATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CAA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGCAGCATCCAGTTGCATaGTCGCCCTGTCCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGEQHPVA*SPCPLD
Trigger: ATCCAGGGGACAGGGCGACAATGCAACTGGATGCTG...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000534711.5
CDS-3UTR CAA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGCCCCACAGCATCCAGTaGCATTGTCGCCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGPHSIQ*HCRPVP
Trigger: GGGGACAGGGCGACAATGCAACTGGATGCTGTGGGG...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS GCA 90 bp ATAAGAAGGGAGGTGGCCCCTGTTGGCTCCGATAAGCAGGTGAGCTaGTGCTTTCTCCTTCATAGGGCTTCCCAGCCCACTGTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: IRREVAPVGSDKQVS*CFLLHRASQPTVGG
Trigger: ACCACCCACAGTGGGCTGGGAAGCCCTATGAAGGAGAAAGCAGCAGCTCACCTGCTTATCGGAGCCAACAGGGGCCACCTCCCTTCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CAA 90 bp AGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCGCTGGTATAGACTGCTaGGCAGGGCCGTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: SLCPAIASMFRILGTERPAGIDC*AGPWGG
Trigger: CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGC...GGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp TGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCGGCTGCCCCCTCACCTaGAGGTCTGCTCCAGAGATC +
Preference number: 5 (lower is better)
Translates to: CPAIASMFRILGTERPTTGCPLT*RSAPEI
Trigger: GATCTCTGGAGCAGACCTCAAGGTGAGGGGGCAGCC...GGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS GCA 90 bp AGCCTCCACCATTTTCCACAGAGAGAAGCCCACGGGCACAGACGCTaGCATGGGAGCAACGTCATCTGCAAGTGCCCTCTCCTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: SLHHFPQREAHGHRR*HGSNVICKCPLLGF
Trigger: AAAACCAAGGAGAGGGCACTTGCAGATGACGTTGCTCCCATGGCAGCGTCTGTGCCCGTGGGCTTCTCTCTGTGGAAAATGGTGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000533025.1
CDS CCA 90 bp CAGACGCTGCCATGGGAGCAACGTCATCTGCAAGTGCCCTCTCCTTaGTTTTCAGTTCTTCGTGAGGCTCTGCATCGCACAGGCACTGTG +
Preference number: 5 (lower is better)
Translates to: QTLPWEQRHLQVPSP*FSVLREALHRTGTV
Trigger: CACAGTGCCTGTGCGATGCAGAGCCTCACGAAGAACTGAAAACCAAGGAGAGGGCACTTGCAGATGACGTTGCTCCCATGGCAGCGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000533025.1
CDS-3UTR CAA 90 bp GTGGGGCAGTACTCATGCTGGTATAGACTGCTTGGCAGGGCCGTGGGGAGGGAGTCCATGTTCAGGATCTaGGGAACAGAAAGACCCACA +
Preference number: 5 (lower is better)
Translates to: VGQYSCWYRLLGRAVGRESMFRI*GTERPT
Trigger: TGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGA...CTCCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGCATGAGTACTGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp GGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCCCATTCTCGCACCTaGGTTCACTCATTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: GPQRKPIKTAYSGSSRLGAHSRT*VHSFWP
Trigger: GGGCCAGAATGAGTGAACCAAGGTGCGAGAATGGGC...CCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS TCA 90 bp GCAACGTCATCTGCAAGTGCCCTCTCCTTGGTTTTCAGTTCTTCGTaGGGCTCTGCATCGCACAGGCACTGTGTCTCAGGGGATCAGAGC +
Preference number: 5 (lower is better)
Translates to: ATSSASALSLVFSSS*GSASHRHCVSGDQS
Trigger: GCTCTGATCCCCTGAGACACAGTGCCTGTGCGATGCAGAGCCTCACGAAGAACTGAAAACCAAGGAGAGGGCACTTGCAGATGACGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000533025.1
CDS TCA 90 bp AGGCTCTGCATCGCACAGGCACTGTGTCTCAGGGGATCAGAGCCTTaGGGTCTGCTCCAGAGATCTCCGTCTATCTCTCTCTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: RLCIAQALCLRGSEP*GLLQRSPSISLSLS
Trigger: AGAGAGAGAGAGAGAGATAGACGGAGATCTCTGGAGCAGACCTCAAGGCTCTGATCCCCTGAGACACAGTGCCTGTGCGATGCAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533025.1
CDS GCA 90 bp TGCAGGAAACGGGCCCTCCTTGCCAAGAGACCACCTTTCAGTCTCTaGTTCACAGGTTTGCCTTCAACTTTGCCAGCGAGTTCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: CRKRALLAKRPPFSL*FTGLPSTLPASSPL
Trigger: CAGAGGGGAACTCGCTGGCAAAGTTGAAGGCAAACCTGTGAAGCAGAGACTGAAAGGTGGTCTCTTGGCAAGGAGGGCCCGTTTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS GCA 90 bp CATTCTCGCACCTTGGTTCACTCATTCTGGCCCAGAATAAGCACCTaGCTGTCTTCCCAGCCTGTGGGCCCCTTGGTCTTTCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: HSRTLVHSFWPRIST*LSSQPVGPLVFLSP
Trigger: AGGAGAGAGAAAGACCAAGGGGCCCACAGGCTGGGAAGACAGGCAGGTGCTTATTCTGGGCCAGAATGAGTGAACCAAGGTGCGAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CCA 90 bp CCACCATTTTCCACAGAGAGAAGCCCACGGGCACAGACGCTGCCATaGGAGCAACGTCATCTGCAAGTGCCCTCTCCTTGGTTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: PPFSTERSPRAQTLP*EQRHLQVPSPWFSV
Trigger: AACTGAAAACCAAGGAGAGGGCACTTGCAGATGACGTTGCTCCCATGGCAGCGTCTGTGCCCGTGGGCTTCTCTCTGTGGAAAATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000533025.1
CDS-3UTR CAA 90 bp GGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTAAGCAGCGGAGCAGGTaGGCTAGAGCCGTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: GGAKTDSSHNPLCLSLCPKQRSR*ARAVFQ
Trigger: CTGAAACACGGCTCTAGCCAACCTGCTCCGCTGCTT...AGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
CDS-3UTR CAA 90 bp AAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATATAAGCTCATCGTGTTaGGCCAGGTGTGCACGGCAG +
Preference number: 5 (lower is better)
Translates to: KVSFAGGSHGKDWPRSTDISSSC*ARCARQ
Trigger: CTGCCGTGCACACCTGGCCAAACACGATGAGCTTAT...ATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp ACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTATGCTGCAGCCAAAGTaGCCGGGAAATAAGTGCGGG +
Preference number: 5 (lower is better)
Translates to: TKVSFAGGSHGKDWPRSTMLQPK*PGNKCG
Trigger: CCCGCACTTATTTCCCGGCAACTTTGGCTGCAGCAT...AGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS TCA 90 bp AGGGCAGGCTTTGGGGGTCTGCACCAGCAGCAAAACAATAAACAGTaGTGCCTGATGCTGCAGCCAAAGTTGCCGGGAAATAAGTGCGGG +
Preference number: 5 (lower is better)
Translates to: RAGFGGLHQQQNNKQ*CLMLQPKLPGNKCG
Trigger: CCCGCACTTATTTCCCGGCAACTTTGGCTGCAGCATCAGGCATCACTGTTTATTGTTTTGCTGCTGGTGCAGACCCCCAAAGCCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS GCA 90 bp GCATCGCACAGGCACTGTGTCTCAGGGGATCAGAGCCTTGAGGTCTaGTCCAGAGATCTCCGTCTATCTCTCTCTCTCTCTCTCAATCTC +
Preference number: 5 (lower is better)
Translates to: ASHRHCVSGDQSLEV*SRDLRLSLSLSLNL
Trigger: GAGATTGAGAGAGAGAGAGAGAGATAGACGGAGATCTCTGGAGCAGACCTCAAGGCTCTGATCCCCTGAGACACAGTGCCTGTGCGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533025.1
CDS-3UTR CAA 90 bp AAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTGTTCCGCGAGCAGCTGTCCTCCCTTGGAAGGACTaGGAAATAAGCTCATCGTGT +
Preference number: 5 (lower is better)
Translates to: KTAYSGSSRLGAVPRAAVLPWKD*EISSSC
Trigger: ACACGATGAGCTTATTTCCAAGTCCTTCCAAGGGAG...GACAGCTGCTCGCGGAACAGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGCTCCCTTGGAAGGACTaGGAAATAAGCTCATCGTGT +
Preference number: 5 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGELPWKD*EISSSC
Trigger: ACACGATGAGCTTATTTCCAAGTCCTTCCAAGGGAG...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534711.5
ENST00000534810.3
CDS-3UTR CAA 90 bp TCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTGCTGGTATAGACTGCTaGGCAGGGCCGTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: SSVHSKRGGAKTDSSHNPAGIDC*AGPWGG
Trigger: CCCTCCCCACGGCCCTGCCAAGCAGTCTATACCAGC...AGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CCAGACCCCTGTTCTAAAGGGTGCCTGGTAGTGGATATGGTGGAGGCAGGGGAGCCTGTGACCCAAGGTTaGTCCTCTGTTCACTCAAAA +
Preference number: 5 (lower is better)
Translates to: PDPCSKGCLVVDMVEAGEPVTQG*SSVHSK
Trigger: TTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGG...CTCCCCTGCCTCCACCATATCCACTACCAGGCACCCTTTAGAACAGGGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp TCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCATGGTCCATGATCTACTaGCCCTGTGACCCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: SFAGGSHGKDWPRSTDFPWSMIY*PCDPRF
Trigger: AAACCTTGGGTCACAGGGCAAGTAGATCATGGACCA...TGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp AGTCTATGCCCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCAGAGAAGAGGCAGTGTaGGCTCTGGTTAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SLCPAIASMFRILGTERPREEAV*ALVSQG
Trigger: GCCCTGGCTAACCAGAGCCAACACTGCCTCTTCTCT...GGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGGGCATAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CAA 90 bp TGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCATAAGCTCATCGTGTTaGGCCAGGTGTGCACGGCAG +
Preference number: 5 (lower is better)
Translates to: CHRFHVQDLGNRKTHNHPISSSC*ARCARQ
Trigger: CTGCCGTGCACACCTGGCCAAACACGATGAGCTTAT...GGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCTGGTCCATGATCTACTaGCCCTGTGACCCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: HTKVSFAGGSHGKDWPRSWSMIY*PCDPRF
Trigger: AAACCTTGGGTCACAGGGCAAGTAGATCATGGACCA...GCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CCTGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCCAGGGCCTGGGATTaGAGTTTTCCCTGCACTCAA +
Preference number: 5 (lower is better)
Translates to: PAIASMFRILGTERPTTIPRAWD*SFPCTQ
Trigger: TTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGG...GATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp TTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCGCGGAGCAGGTTGGCTaGAGGTCTGCTCCAGAGATC +
Preference number: 5 (lower is better)
Translates to: FTQKEVEQKRIPPTILSAAEQVG*RSAPEI
Trigger: GATCTCTGGAGCAGACCTCAAGCCAACCTGCTCCGC...GGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534810.3
CDS-3UTR CAA 90 bp CATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATTTTCCACGAATGTGGCTGTGTGTaGTGGAACTGCATCATAACA +
Preference number: 5 (lower is better)
Translates to: HSLVAATGKTGPVALIFHECGCV*WNCIIT
Trigger: TGTTATGATGCAGTTCCACAACACACAGCCACATTC...GTGGAAAATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CAA 90 bp TGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCAGGAATAGAGGAAGATaGCCTTCTGCCCACGCGCCA +
Preference number: 5 (lower is better)
Translates to: CHRFHVQDLGNRKTHNHPRNRGR*PSAHAP
Trigger: TGGCGCGTGGGCAGAAGGCAATCTTCCTCTATTCCT...GGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS TCA 90 bp GCTTTGGGGGTCTGCACCAGCAGCAAAACAATAAACAGTGATGCCTaGTGCTGCAGCCAAAGTTGCCGGGAAATAAGTGCGGGAATCGTC +
Preference number: 5 (lower is better)
Translates to: ALGVCTSSKTINSDA*CCSQSCREISAGIV
Trigger: GACGATTCCCGCACTTATTTCCCGGCAACTTTGGCTGCAGCATCAGGCATCACTGTTTATTGTTTTGCTGCTGGTGCAGACCCCCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS GCA 90 bp TTCACAGGTTTGCCTTCAACTTTGCCAGCGAGTTCCCCTCTGACATaGACCACCTTGAAACACCTTCTTCAAGGGGCATGGAGAATGGGG +
Preference number: 5 (lower is better)
Translates to: FTGLPSTLPASSPLT*TTLKHLLQGAWRMG
Trigger: CCCCATTCTCCATGCCCCTTGAAGAAGGTGTTTCAAGGTGGTGCATGTCAGAGGGGAACTCGCTGGCAAAGTTGAAGGCAAACCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CCA 90 bp AATACATTTTCTTCAGGCAATCTGACAGCTGGAGCCAATGGGAAATaGGTAGCATGTCAGAGGAGCCTGATTCCTGGGCTGGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: NTFSSGNLTAGANGK*VACQRSLIPGLGRA
Trigger: AGCCCTGCCCAGCCCAGGAATCAGGCTCCTCTGACATGCTACCCATTTCCCATTGGCTCCAGCTGTCAGATTGCCTGAAGAAAATGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CAA 90 bp ACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGAAATAGAAGTCACCTaGAGGTCTGCTCCAGAGATC +
Preference number: 5 (lower is better)
Translates to: TKVSFAGGSHGKDWPRSTEIEVT*RSAPEI
Trigger: GATCTCTGGAGCAGACCTCAAGGTGACTTCTATTTC...AGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300022.8
ENST00000532314.5
CDS-3UTR CAA 90 bp TCCAACCCAAGTCTTTTCTCATCTGCTGTTCTGTGGTCCATGATCTACTTGCCCAAGCAGCGGAGCAGGTaGGCTAGAGCCGTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: SNPSLFSSAVLWSMIYLPKQRSR*ARAVFQ
Trigger: CTGAAACACGGCTCTAGCCAACCTGCTCCGCTGCTT...GGGCAAGTAGATCATGGACCACAGAACAGCAGATGAGAAAAGACTTGGGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
CDS-3UTR CAA 90 bp AACGGATTCCTCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCTCCCTTGGAAGGACTaGGAAATAAGCTCATCGTGT +
Preference number: 5 (lower is better)
Translates to: NGFLPQSSLPESMPCHRFLPWKD*EISSSC
Trigger: ACACGATGAGCTTATTTCCAAGTCCTTCCAAGGGAG...GAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGAGGAATCCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534810.3
CDS-3UTR CAA 90 bp TCCCACAATCCTCTCTGCCTGAGTCTATGCCCTGCCATCGCTTCCATGTTCAGGCTCCCTTGGAAGGACTaGGAAATAAGCTCATCGTGT +
Preference number: 5 (lower is better)
Translates to: SHNPLCLSLCPAIASMFRLPWKD*EISSSC
Trigger: ACACGATGAGCTTATTTCCAAGTCCTTCCAAGGGAG...CCTGAACATGGAAGCGATGGCAGGGCATAGACTCAGGCAGAGAGGATTGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534810.3
CDS-3UTR CAA 90 bp TGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTCGGCCATGGCTCCCTaGGAAGGACTTGGAAATAAG +
Preference number: 5 (lower is better)
Translates to: CHRFHVQDLGNRKTHNHPSAMAP*EGLGNK
Trigger: CTTATTTCCAAGTCCTTCCAAGGGAGCCATGGCCGA...GGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534810.3
CDS-3UTR CAA 90 bp AAAGTTTCATTCGCTGGTGGCAGCCACGGGAAAGACTGGCCCCGTAGCACTGATCCTGTGACCCAAGGTTaGTCCTCTGTTCACTCAAAA +
Preference number: 5 (lower is better)
Translates to: KVSFAGGSHGKDWPRSTDPVTQG*SSVHSK
Trigger: TTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGG...ATCAGTGCTACGGGGCCAGTCTTTCCCGTGGCTGCCACCAGCGAATGAAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CACCCCACCCAATGGCAAAAGTTAGATACTCGAAAGTGCCTCTTCAGTGCCAAGGGTTTGCCTTCAACTTaGCCAGCGAGTTCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: HPTQWQKLDTRKCLFSAKGLPST*PASSPL
Trigger: CAGAGGGGAACTCGCTGGCAAAGTTGAAGGCAAACC...CTTGGCACTGAAGAGGCACTTTCGAGTATCTAACTTTTGCCATTGGGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS TCA 90 bp GCAGTGACTCTGTGGGTGACTGAAGATGAAGTAATTGCTGGGTTCTaGTTAGGAATAGAGGAAGATTGCCTTCTGCCCACGCGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: AVTLWVTEDEVIAGF*LGIEEDCLLPTRQP
Trigger: AGGCTGGCGCGTGGGCAGAAGGCAATCTTCCTCTATTCCTAATCAGAACCCAGCAATTACTTCATCTTCAGTCACCCACAGAGTCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS TCA 90 bp GGAGAGCATGCAGGCAGGTATACAAACCCTGATTCGGTTCTCTCCTaGGGTCAGGGTCCTGTGCTCTGGGACTCTTCACTAGAACTTTAT +
Preference number: 5 (lower is better)
Translates to: GEHAGRYTNPDSVLS*GQGPVLWDSSLELY
Trigger: ATAAAGTTCTAGTGAAGAGTCCCAGAGCACAGGACCCTGACCTCAGGAGAGAACCGAATCAGGGTTTGTATACCTGCCTGCATGCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CCA 90 bp GGCAGAAAATACATTTTCTTCAGGCAATCTGACAGCTGGAGCCAATaGGAAATGGGTAGCATGTCAGAGGAGCCTGATTCCTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GRKYIFFRQSDSWSQ*EMGSMSEEPDSWAG
Trigger: CCCAGCCCAGGAATCAGGCTCCTCTGACATGCTACCCATTTCCCATTGGCTCCAGCTGTCAGATTGCCTGAAGAAAATGTATTTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CAA 90 bp TTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCTTTCCGCTCCTTCAATaGGGAAGGGGATGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: LLFPRAWDLSFPCTQVLFFPLLQ*GRGWGW
Trigger: CCACCCCCATCCCCTTCCCAATTGAAGGAGCGGAAA...GAAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CCCACCCAATGGCAAAAGTTAGATACTCGAAAGTGCCTCTTCAGTGCCAAGATATTTCCGCTCCTTCAATaGGGAAGGGGATGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: PTQWQKLDTRKCLFSAKIFPLLQ*GRGWGW
Trigger: CCACCCCCATCCCCTTCCCAATTGAAGGAGCGGAAA...TATCTTGGCACTGAAGAGGCACTTTCGAGTATCTAACTTTTGCCATTGGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp GTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATAAGCAGCGGAGCAGGTaGGCTAGAGCCGTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: VTQGLSSVHSKRGGAKTDKQRSR*ARAVFQ
Trigger: CTGAAACACGGCTCTAGCCAACCTGCTCCGCTGCTT...ATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
CDS-3UTR CAA 90 bp TTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTCTGCCATAAGCTCATCGTGTTaGGCCAGGTGTGCACGGCAG +
Preference number: 5 (lower is better)
Translates to: FTQKEVEQKRIPPTILSAISSSC*ARCARQ
Trigger: CTGCCGTGCACACCTGGCCAAACACGATGAGCTTAT...GGCAGAGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTAGGGGCTTCCATGTTCAGGATCTaGGGAACAGAAAGACCCACA +
Preference number: 5 (lower is better)
Translates to: PQRKPIKTAYSGSSRLGASMFRI*GTERPT
Trigger: TGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGA...AGCCCCTAGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp GACTGGGCCTCAGAGAAAGCCCATAAAGACTGCTTACTCTGGAAGCAGCCGACTCCTGTGACCCAAGGTTaGTCCTCTGTTCACTCAAAA +
Preference number: 5 (lower is better)
Translates to: DWASEKAHKDCLLWKQPTPVTQG*SSVHSK
Trigger: TTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGG...AGTCGGCTGCTTCCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp TGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAACCCAGGGCCTGGGATTaGAGTTTTCCCTGCACTCAA +
Preference number: 5 (lower is better)
Translates to: CPVTQGLSSVHSKRGGAKPRAWD*SFPCTQ
Trigger: TTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGG...TTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp TCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTGGGAATCGTCAGAGCTaGGAGAGGGATGGAGGAACC +
Preference number: 5 (lower is better)
Translates to: SSVHSKRGGAKTDSSHNPGNRQS*ERDGGT
Trigger: GGTTCCTCCATCCCTCTCCAAGCTCTGACGATTCCC...AGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CAA 90 bp GTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAGGAAACGGGCCCTCCTaGCCAAGAGACCACCTTTCA +
Preference number: 5 (lower is better)
Translates to: VCPLFTQKEVEQKRIPPTGNGPS*PRDHLS
Trigger: TGAAAGGTGGTCTCTTGGCAAGGAGGGCCCGTTTCC...TGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CCA 90 bp CTAGAACTTTATAGATGTTTCCAACAGTACCAAAGCCCTCACGTGTaGCCGCCCATTCTCGCACCTTGGTTCACTCATTCTGGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: LELYRCFQQYQSPHV*PPILAPWFTHSGPE
Trigger: TTCTGGGCCAGAATGAGTGAACCAAGGTGCGAGAATGGGCGGCCACACGTGAGGGCTTTGGTACTGTTGGAAACATCTATAAAGTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CAA 90 bp TGCCATCGCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCGAAATAGAAGTCACCTaGAGGTCTGCTCCAGAGATC +
Preference number: 5 (lower is better)
Translates to: CHRFHVQDLGNRKTHNHPEIEVT*RSAPEI
Trigger: GATCTCTGGAGCAGACCTCAAGGTGACTTCTATTTC...GGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGCGATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300022.8
ENST00000532314.5
CDS-3UTR CAA 90 bp TGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAATCGGCCATGGCTCCCTaGGAAGGACTTGGAAATAAG +
Preference number: 5 (lower is better)
Translates to: CPVTQGLSSVHSKRGGAKSAMAP*EGLGNK
Trigger: CTTATTTCCAAGTCCTTCCAAGGGAGCCATGGCCGA...TTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534810.3
CDS-3UTR CAA 90 bp GCTTCCATGTTCAGGATCTTGGGAACAGAAAGACCCACAACCATCCCTTTCCCCCCTGTGACCCAAGGTTaGTCCTCTGTTCACTCAAAA +
Preference number: 5 (lower is better)
Translates to: ASMFRILGTERPTTIPFPPVTQG*SSVHSK
Trigger: TTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGG...GGGGAAAGGGATGGTTGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGAAGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp ACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCATGGTCCATGATCTACTaGCCCTGTGACCCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: TCPVTQGLSSVHSKRGGAWSMIY*PCDPRF
Trigger: AAACCTTGGGTCACAGGGCAAGTAGATCATGGACCA...TGCTCCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp GTTTGTCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACACCCAGGGCCTGGGATTaGAGTTTTCCCTGCACTCAA +
Preference number: 5 (lower is better)
Translates to: VCPLFTQKEVEQKRIPPTPRAWD*SFPCTQ
Trigger: TTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGG...TGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGACAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CACCCCACCCAATGGCAAAAGTTAGATACTCGAAAGTGCCTCTTCAGTGCCAAGCTGACATGCACCACCTaGAAACACCTTCTTCAAGGG +
Preference number: 5 (lower is better)
Translates to: HPTQWQKLDTRKCLFSAKLTCTT*KHLLQG
Trigger: CCCTTGAAGAAGGTGTTTCAAGGTGGTGCATGTCAG...CTTGGCACTGAAGAGGCACTTTCGAGTATCTAACTTTTGCCATTGGGTGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CAA 90 bp TCAAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGACAGCCTGTGGGCCCCTaGGTCTTTCTCTCTCCTAGT +
Preference number: 5 (lower is better)
Translates to: SSTLCIIQKFHSLVAATGQPVGP*VFLSPS
Trigger: ACTAGGAGAGAGAAAGACCAAGGGGCCCACAGGCTG...TCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CAA 90 bp TTTACTATTTCCCAGGGCCTGGGATTTGAGTTTTCCCTGCACTCAAGTCCTTTTCAGCATCCAGTTGCATaGTCGCCCTGTCCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: FTISQGLGFEFSLHSSPFQHPVA*SPCPLD
Trigger: ATCCAGGGGACAGGGCGACAATGCAACTGGATGCTG...AAAAGGACTTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGGAAATAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS-3UTR CAA 90 bp ATCTACTTGCCCTGTGACCCAAGGTTTGTCCTCTGTTCACTCAAAAAGAGGTGGTGGTCCATGATCTACTaGCCCTGTGACCCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: IYLPCDPRFVLCSLKKRWWSMIY*PCDPRF
Trigger: AAACCTTGGGTCACAGGGCAAGTAGATCATGGACCA...CCACCTCTTTTTGAGTGAACAGAGGACAAACCTTGGGTCACAGGGCAAGTAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CTCCTGGTGTCTGAGACCAGAATTTCACTCCAACCCAAGTCTTTTCTCATCTGCTCCATGTTCAGGATCTaGGGAACAGAAAGACCCACA +
Preference number: 5 (lower is better)
Translates to: LLVSETRISLQPKSFLICSMFRI*GTERPT
Trigger: TGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGA...GCAGATGAGAAAAGACTTGGGTTGGAGTGAAATTCTGGTCTCAGACACCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp AAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAACCCAGGGCCTGGGATTaGAGTTTTCCCTGCACTCAA +
Preference number: 5 (lower is better)
Translates to: KHFMYHTKVSFAGGSHGKPRAWD*SFPCTQ
Trigger: TTGAGTGCAGGGAAAACTCAAATCCCAGGCCCTGGG...TTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp AAGCACTTTATGTATCATACAAAAGTTTCATTCGCTGGTGGCAGCCACGGGAAATCGGCCATGGCTCCCTaGGAAGGACTTGGAAATAAG +
Preference number: 5 (lower is better)
Translates to: KHFMYHTKVSFAGGSHGKSAMAP*EGLGNK
Trigger: CTTATTTCCAAGTCCTTCCAAGGGAGCCATGGCCGA...TTTCCCGTGGCTGCCACCAGCGAATGAAACTTTTGTATGATACATAAAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534810.3
CDS-3UTR CAA 90 bp TCCTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTTCCATGTTCAGGATCTaGGGAACAGAAAGACCCACA +
Preference number: 5 (lower is better)
Translates to: SSVHSKRGGAKTDSSHNPSMFRI*GTERPT
Trigger: TGTGGGTCTTTCTGTTCCCAAGATCCTGAACATGGA...AGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000532314.5
ENST00000534810.3
CDS-3UTR CAA 90 bp CTCTGTTCACTCAAAAAGAGGTGGAGCAAAAACGGATTCCTCCCACAATCCTCTTTTAACAGCTGTGCTTaGGGGCACAAGGCAGAAAAT +
Preference number: 5 (lower is better)
Translates to: LCSLKKRWSKNGFLPQSSFNSCA*GHKAEN
Trigger: ATTTTCTGCCTTGTGCCCCAAAGCACAGCTGTTAAA...AGAGGATTGTGGGAGGAATCCGTTTTTGCTCCACCTCTTTTTGAGTGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CCA 72 bp GGGCTGGAGGACAATGCCCTGGTGGGCTGGAGGGGCTaGCGCCGTGCAGCCCCCGCAGAGACGGTCGCAGGT +
Preference number: 6 (lower is better)
Translates to: GLEDNALVGWRG*RRAAPAETVAG
Trigger: ACCTGCGACCGTCTCTGCGGGGGCTGCACGGCGCCAGCCCCTCCAGCCCACCAGGGCATTGTCCTCCAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300022.8
ENST00000524592.1
ENST00000524669.5
ENST00000528797.5
ENST00000529776.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS TCA 72 bp CTGGCGCCGTGCAGCCCCCGCAGAGACGGTCGCAGGTaGAGCAGCGGAGCAGGTTGGCTTGAGGTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LAPCSPRRDGRR*SSGAGWLEVCS
Trigger: GGAGCAGACCTCAAGCCAACCTGCTCCGCTGCTTCACCTGCGACCGTCTCTGCGGGGGCTGCACGGCGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529776.5
ENST00000534810.3
CDS TCA 72 bp CTGGCGCCGTGCAGCCCCCGCAGAGACGGTCGCAGGTaGAGCAGCGGAGCAGGTTGGCTAGAGCCGTGTTTC +
Preference number: 6 (lower is better)
Translates to: LAPCSPRRDGRR*SSGAGWLEPCF
Trigger: GAAACACGGCTCTAGCCAACCTGCTCCGCTGCTTCACCTGCGACCGTCTCTGCGGGGGCTGCACGGCGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300022.8
ENST00000524592.1
ENST00000524669.5
ENST00000528797.5
ENST00000532314.5
ENST00000534711.5
CDS CCA 72 bp GTCCTCTCCTCCGGGCTGGGTCCCAGGAAGACACCTTaGGCTGAGTTCAGGGTGACATTGGGCTCCGGCTGC +
Preference number: 6 (lower is better)
Translates to: VLSSGLGPRKTP*AEFRVTLGSGC
Trigger: GCAGCCGGAGCCCAATGTCACCCTGAACTCAGCCCAAGGTGTCTTCCTGGGACCCAGCCCGGAGGAGAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS TCA 72 bp TGGGTCCCAGGAAGACACCTTGGGCTGAGTTCAGGGTaGCATTGGGCTCCGGCTGCAGGAAACGGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: WVPGRHLGLSSG*HWAPAAGNGPS
Trigger: GGAGGGCCCGTTTCCTGCAGCCGGAGCCCAATGTCACCCTGAACTCAGCCCAAGGTGTCTTCCTGGGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CCA 72 bp CGAGTGGAGCCCCGTGAGCAAGAGGCGCTGTTCAGCTaGCCCGCAACCCACGTTGACCCTGTCTCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: RVEPREQEALFS*PATHVDPVSGN
Trigger: GTTTCCTGAGACAGGGTCAACGTGGGTTGCGGGCCAGCTGAACAGCGCCTCTTGCTCACGGGGCTCCACTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524592.1
ENST00000528797.5
CDS CCA 72 bp CCTGTCCCCTGGATCCCCATTCTGCTCTGGCAAACCTaGCAGCCGATCCAGGCTTCTGGCGCCAAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: PVPWIPILLWQT*QPIQASGAKAR
Trigger: CCTGGCTTTGGCGCCAGAAGCCTGGATCGGCTGCCAGGTTTGCCAGAGCAGAATGGGGATCCAGGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000534711.5
CDS CCA 72 bp CATTGTCGCCCTGTCCCCTGGATCCCCATTCTGCTCTaGCAAACCTGGCAGCCGATCCAGGCTTCTGGCGCC +
Preference number: 6 (lower is better)
Translates to: HCRPVPWIPILL*QTWQPIQASGA
Trigger: GGCGCCAGAAGCCTGGATCGGCTGCCAGGTTTGCCAGAGCAGAATGGGGATCCAGGGGACAGGGCGACAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000534711.5
CDS CCA 72 bp GTCCTCTCCTCCGGGCTGGGTCCCAGGAAGACACCTTaGGCTGAGTTCAGGGTGACATTGGGCTCCGGCTTG +
Preference number: 6 (lower is better)
Translates to: VLSSGLGPRKTP*AEFRVTLGSGL
Trigger: CAAGCCGGAGCCCAATGTCACCCTGAACTCAGCCCAAGGTGTCTTCCTGGGACCCAGCCCGGAGGAGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531442.1
CDS CAA 90 bp GGGCTGGGTCCCAGGAAGACACCTTGGGCTGAGTTCAGGGTGACATaGGGCTCCGGCTGCAGGAAACGGGCCCTCCTTGCCAAGAGACCA +
Preference number: 6 (lower is better)
Translates to: GLGPRKTPWAEFRVT*GSGCRKRALLAKRP
Trigger: TGGTCTCTTGGCAAGGAGGGCCCGTTTCCTGCAGCCGGAGCCCAATGTCACCCTGAACTCAGCCCAAGGTGTCTTCCTGGGACCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS TCA 72 bp GCAGTGGCCACAGGCACCCAGCTGTTCCACTCTCTCTaGAGGCCGCCAGGCAGTCTCTCCGCAAAACCTCCA +
Preference number: 6 (lower is better)
Translates to: AVATGTQLFHSL*RPPGSLSAKPP
Trigger: TGGAGGTTTTGCGGAGAGACTGCCTGGCGGCCTTCAGAGAGAGTGGAACAGCTGGGTGCCTGTGGCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000531442.1
CDS GCA 72 bp CCTTGGGCTGAGTTCAGGGTGACATTGGGCTCCGGCTaGAGGAAACGGGCCCTCCTTGCCAAGAGACCACCT +
Preference number: 6 (lower is better)
Translates to: PWAEFRVTLGSG*RKRALLAKRPP
Trigger: AGGTGGTCTCTTGGCAAGGAGGGCCCGTTTCCTGCAGCCGGAGCCCAATGTCACCCTGAACTCAGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CCA 72 bp CGAGTGGAGCCCCGTGAGCAAGAGGCGCTGTTCAGCTaGCCCGCAACCCACGTTGACCACGGAGTTAAACAG +
Preference number: 6 (lower is better)
Translates to: RVEPREQEALFS*PATHVDHGVKQ
Trigger: CTGTTTAACTCCGTGGTCAACGTGGGTTGCGGGCCAGCTGAACAGCGCCTCTTGCTCACGGGGCTCCACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300022.8
ENST00000524669.5
ENST00000534711.5
ENST00000534810.3
CDS CCA 72 bp TCTGCTCTGGCAAACCTGGCAGCCGATCCAGGCTTCTaGCGCCAAAGCCAGGGAGTCGGTGTTTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: SALANLAADPGF*RQSQGVGVSPS
Trigger: GGAGGGAGAAACACCGACTCCCTGGCTTTGGCGCCAGAAGCCTGGATCGGCTGCCAGGTTTGCCAGAGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CAA 90 bp GCCCCCGCAGAGACGGTCGCAGGTGAAGCAGCGGAGCAGGTTGGCTaGAGGTCTGCTCCAGAGATCTCCGTCTATCTCTCTCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: APAETVAGEAAEQVG*RSAPEISVYLSLSL
Trigger: GAGAGAGAGAGAGAGATAGACGGAGATCTCTGGAGCAGACCTCAAGCCAACCTGCTCCGCTGCTTCACCTGCGACCGTCTCTGCGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529776.5
ENST00000534810.3
CDS CCA 72 bp AGGGCATACAGGCTCTCCTCGTCCTGTCCTCCGCAGTaGCCACAGGCACCCAGCTGTTCCACTCTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: RAYRLSSSCPPQ*PQAPSCSTLSE
Trigger: TTCAGAGAGAGTGGAACAGCTGGGTGCCTGTGGCCACTGCGGAGGACAGGACGAGGAGAGCCTGTATGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000531442.1
CDS CCA 72 bp TCCACAGAGAGAAGCCCACGGGCACAGACGCTGCCATaGGAGCAACGTCATCTGCAAGTGCCCTCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: STERSPRAQTLP*EQRHLQVPSPW
Trigger: CCAAGGAGAGGGCACTTGCAGATGACGTTGCTCCCATGGCAGCGTCTGTGCCCGTGGGCTTCTCTCTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000533025.1
CDS CAA 90 bp GGGCTGGGTCCCAGGAAGACACCTTGGGCTGAGTTCAGGGTGACATaGGGCTCCGGCTTGAGGTCTGCTCCAGAGATCTCCGTCTATCTC +
Preference number: 6 (lower is better)
Translates to: GLGPRKTPWAEFRVT*GSGLRSAPEISVYL
Trigger: GAGATAGACGGAGATCTCTGGAGCAGACCTCAAGCCGGAGCCCAATGTCACCCTGAACTCAGCCCAAGGTGTCTTCCTGGGACCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531442.1
CDS TCA 72 bp TCTCACAGAAAATGTCAGCTACCGAGTGGAGCCCCGTaGGCAAGAGGCGCTGTTCAGCTGGCCCGCAACCCA +
Preference number: 6 (lower is better)
Translates to: SHRKCQLPSGAP*ARGAVQLARNP
Trigger: TGGGTTGCGGGCCAGCTGAACAGCGCCTCTTGCTCACGGGGCTCCACTCGGTAGCTGACATTTTCTGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300022.8
ENST00000524592.1
ENST00000524669.5
ENST00000528797.5
ENST00000532314.5
ENST00000534711.5
ENST00000534810.3
CDS GCA 72 bp GTGGCCCCTGTTGGCTCCGATAAGCAGGTGAGCTGCTaGTTTCTCCTTCATAGGGCTTCCCAGCCCACTGTG +
Preference number: 6 (lower is better)
Translates to: VAPVGSDKQVSC*FLLHRASQPTV
Trigger: CACAGTGGGCTGGGAAGCCCTATGAAGGAGAAAGCAGCAGCTCACCTGCTTATCGGAGCCAACAGGGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CAA 72 bp CCCAGGAAGACACCTTGGGCTGAGTTCAGGGTGACATaGGGCTCCGGCTTGAGGTCTGCTCCAGAGATCTCC +
Preference number: 6 (lower is better)
Translates to: PRKTPWAEFRVT*GSGLRSAPEIS
Trigger: GGAGATCTCTGGAGCAGACCTCAAGCCGGAGCCCAATGTCACCCTGAACTCAGCCCAAGGTGTCTTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531442.1
CDS GCA 72 bp CATTTTCCACAGAGAGAAGCCCACGGGCACAGACGCTaGCATGGGAGCAACGTCATCTGCAAGTGCCCTCTC +
Preference number: 6 (lower is better)
Translates to: HFPQREAHGHRR*HGSNVICKCPL
Trigger: GAGAGGGCACTTGCAGATGACGTTGCTCCCATGGCAGCGTCTGTGCCCGTGGGCTTCTCTCTGTGGAAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000533025.1
CDS CCA 72 bp AGAAATAGAAGTCACCTGGCAGCCGATCCAGGCTTCTaGCGCCAAAGCCAGGGAGTCGGTGTTTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: RNRSHLAADPGF*RQSQGVGVSPS
Trigger: GGAGGGAGAAACACCGACTCCCTGGCTTTGGCGCCAGAAGCCTGGATCGGCTGCCAGGTGACTTCTATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528797.5
ENST00000533025.1
CDS CCA 72 bp GAGACTATCTTCAGTTTCAGGTCCTCTCCTCCGGGCTaGGTCCCAGGAAGACACCTTGGGCTGAGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: ETIFSFRSSPPG*VPGRHLGLSSG
Trigger: CCCTGAACTCAGCCCAAGGTGTCTTCCTGGGACCCAGCCCGGAGGAGAGGACCTGAAACTGAAGATAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000531442.1
CDS CAA 72 bp GAGACGGTCGCAGGTGAAGCAGCGGAGCAGGTTGGCTaGAGGTCTGCTCCAGAGATCTCCGTCTATCTCTCT +
Preference number: 6 (lower is better)
Translates to: ETVAGEAAEQVG*RSAPEISVYLS
Trigger: AGAGAGATAGACGGAGATCTCTGGAGCAGACCTCAAGCCAACCTGCTCCGCTGCTTCACCTGCGACCGTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529776.5
ENST00000534810.3
CDS CAA 72 bp CCAAAGCCCTCACGTGTGGCCGCCCATTCTCGCACCTaGGTTCACTCATTCTGGCCCAGAATAAGCACCTGC +
Preference number: 6 (lower is better)
Translates to: PKPSRVAAHSRT*VHSFWPRISTC
Trigger: GCAGGTGCTTATTCTGGGCCAGAATGAGTGAACCAAGGTGCGAGAATGGGCGGCCACACGTGAGGGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CAA 90 bp CCAACAGTACCAAAGCCCTCACGTGTGGCCGCCCATTCTCGCACCTaGGTTCACTCATTCTGGCCCAGAATAAGCACCTGCCTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: PTVPKPSRVAAHSRT*VHSFWPRISTCLSS
Trigger: GGAAGACAGGCAGGTGCTTATTCTGGGCCAGAATGAGTGAACCAAGGTGCGAGAATGGGCGGCCACACGTGAGGGCTTTGGTACTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CAA 90 bp GAGGCTCTGCATCGCACAGGCACTGTGTCTCAGGGGATCAGAGCCTaGAGGTCTGCTCCAGAGATCTCCGTCTATCTCTCTCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: EALHRTGTVSQGIRA*RSAPEISVYLSLSL
Trigger: GAGAGAGAGAGAGAGATAGACGGAGATCTCTGGAGCAGACCTCAAGGCTCTGATCCCCTGAGACACAGTGCCTGTGCGATGCAGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533025.1
CDS TCA 72 bp AGGGGAGGGAGAGCATGCAGGCAGGTATACAAACCCTaGTTCGGTTCTCTCCTGAGGTCAGGGTCCTGTGCT +
Preference number: 6 (lower is better)
Translates to: RGGRACRQVYKP*FGSLLRSGSCA
Trigger: AGCACAGGACCCTGACCTCAGGAGAGAACCGAATCAGGGTTTGTATACCTGCCTGCATGCTCTCCCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CAA 72 bp CCTTGGGCTGAGTTCAGGGTGACATTGGGCTCCGGCTaGAGGTCTGCTCCAGAGATCTCCGTCTATCTCTCT +
Preference number: 6 (lower is better)
Translates to: PWAEFRVTLGSG*RSAPEISVYLS
Trigger: AGAGAGATAGACGGAGATCTCTGGAGCAGACCTCAAGCCGGAGCCCAATGTCACCCTGAACTCAGCCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531442.1
CDS CAA 90 bp AGGAAGACACCTTGGGCTGAGTTCAGGGTGACATTGGGCTCCGGCTaGAGGTCTGCTCCAGAGATCTCCGTCTATCTCTCTCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: RKTPWAEFRVTLGSG*RSAPEISVYLSLSL
Trigger: GAGAGAGAGAGAGAGATAGACGGAGATCTCTGGAGCAGACCTCAAGCCGGAGCCCAATGTCACCCTGAACTCAGCCCAAGGTGTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531442.1
CDS TCA 72 bp TCTGCAAGTGCCCTCTCCTTGGTTTTCAGTTCTTCGTaGGGCTCTGCATCGCACAGGCACTGTGTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: SASALSLVFSSS*GSASHRHCVSG
Trigger: CCCTGAGACACAGTGCCTGTGCGATGCAGAGCCTCACGAAGAACTGAAAACCAAGGAGAGGGCACTTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000533025.1
CDS GCA 72 bp TGCCTGATGCTGCAGCCAAAGTTGCCGGGAAATAAGTaGGGGAATCGTCAGAGCTTGGAGAGGGATGGAGGA +
Preference number: 6 (lower is better)
Translates to: CLMLQPKLPGNK*GNRQSLERDGG
Trigger: TCCTCCATCCCTCTCCAAGCTCTGACGATTCCCGCACTTATTTCCCGGCAACTTTGGCTGCAGCATCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CCA 72 bp GCTGCTTTCTCCTTCATAGGGCTTCCCAGCCCACTGTaGGTGGTTAGCCTAAGTCTGGTTCAGAGATGCCAG +
Preference number: 6 (lower is better)
Translates to: AAFSFIGLPSPL*VVSLSLVQRCQ
Trigger: CTGGCATCTCTGAACCAGACTTAGGCTAACCACCCACAGTGGGCTGGGAAGCCCTATGAAGGAGAAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS TCA 72 bp GCAGGCAGGTATACAAACCCTGATTCGGTTCTCTCCTaGGGTCAGGGTCCTGTGCTCTGGGACTCTTCACTA +
Preference number: 6 (lower is better)
Translates to: AGRYTNPDSVLS*GQGPVLWDSSL
Trigger: TAGTGAAGAGTCCCAGAGCACAGGACCCTGACCTCAGGAGAGAACCGAATCAGGGTTTGTATACCTGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CCA 72 bp GGGCAGAGGTTGTCTCTCGTTCTGTACCTCGGTCTGTaGGTGAATGTGGCTGTGTGTTGTGGAACTGCATCA +
Preference number: 6 (lower is better)
Translates to: GQRLSLVLYLGL*VNVAVCCGTAS
Trigger: TGATGCAGTTCCACAACACACAGCCACATTCACCCACAGACCGAGGTACAGAACGAGAGACAACCTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529776.5
ENST00000533025.1
CDS CCA 72 bp CCATGGGAGCAACGTCATCTGCAAGTGCCCTCTCCTTaGTTTTCAGTTCTTCGTGAGGCTCTGCATCGCACA +
Preference number: 6 (lower is better)
Translates to: PWEQRHLQVPSP*FSVLREALHRT
Trigger: TGTGCGATGCAGAGCCTCACGAAGAACTGAAAACCAAGGAGAGGGCACTTGCAGATGACGTTGCTCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524669.5
ENST00000533025.1
CDS CAA 72 bp ACTTTGCCAGCGAGTTCCCCTCTGACATGCACCACCTaGAAACACCTTCTTCAAGGGGCATGGAGAATGGGG +
Preference number: 6 (lower is better)
Translates to: TLPASSPLTCTT*KHLLQGAWRMG
Trigger: CCCCATTCTCCATGCCCCTTGAAGAAGGTGTTTCAAGGTGGTGCATGTCAGAGGGGAACTCGCTGGCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS GCA 72 bp TTGCCTTCAACTTTGCCAGCGAGTTCCCCTCTGACATaGACCACCTTGAAACACCTTCTTCAAGGGGCATGG +
Preference number: 6 (lower is better)
Translates to: LPSTLPASSPLT*TTLKHLLQGAW
Trigger: CCATGCCCCTTGAAGAAGGTGTTTCAAGGTGGTGCATGTCAGAGGGGAACTCGCTGGCAAAGTTGAAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CAA 72 bp AACTTCCATCTGGAGAGAACTGGACAGCCCCTGCCTTaGATAATCCACCCCTTTAAGACTAGAGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: NFHLERTGQPLP*IIHPFKTRAWA
Trigger: GGCCCAGGCTCTAGTCTTAAAGGGGTGGATTATCAAAGGCAGGGGCTGTCCAGTTCTCTCCAGATGGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524592.1
ENST00000528797.5
CDS CAA 72 bp CCTTTCAGTCTCTGCTTCACAGGTTTGCCTTCAACTTaGCCAGCGAGTTCCCCTCTGACATGCACCACCTTG +
Preference number: 6 (lower is better)
Translates to: PFSLCFTGLPST*PASSPLTCTTL
Trigger: CAAGGTGGTGCATGTCAGAGGGGAACTCGCTGGCAAAGTTGAAGGCAAACCTGTGAAGCAGAGACTGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS TCA 72 bp TTTGGGGGTCTGCACCAGCAGCAAAACAATAAACAGTaGTGCCTGATGCTGCAGCCAAAGTTGCCGGGAAAT +
Preference number: 6 (lower is better)
Translates to: FGGLHQQQNNKQ*CLMLQPKLPGN
Trigger: ATTTCCCGGCAACTTTGGCTGCAGCATCAGGCATCACTGTTTATTGTTTTGCTGCTGGTGCAGACCCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS CAA 72 bp CCCCCAGACGAGAACCAGATAGAAATAGAAGTCACCTaGAGGTCTGCTCCAGAGATCTCCGTCTATCTCTCT +
Preference number: 6 (lower is better)
Translates to: PPDENQIEIEVT*RSAPEISVYLS
Trigger: AGAGAGATAGACGGAGATCTCTGGAGCAGACCTCAAGGTGACTTCTATTTCTATCTGGTTCTCGTCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300022.8
ENST00000524592.1
ENST00000532314.5
CDS CCA 72 bp TACATTTTCTTCAGGCAATCTGACAGCTGGAGCCAATaGGAAATGGGTAGCATGTCAGAGGAGCCTGATTCC +
Preference number: 6 (lower is better)
Translates to: YIFFRQSDSWSQ*EMGSMSEEPDS
Trigger: GGAATCAGGCTCCTCTGACATGCTACCCATTTCCCATTGGCTCCAGCTGTCAGATTGCCTGAAGAAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524669.5
CDS TCA 72 bp CTGTGGGTGACTGAAGATGAAGTAATTGCTGGGTTCTaGTTAGGAATAGAGGAAGATTGCCTTCTGCCCACG +
Preference number: 6 (lower is better)
Translates to: LWVTEDEVIAGF*LGIEEDCLLPT
Trigger: CGTGGGCAGAAGGCAATCTTCCTCTATTCCTAATCAGAACCCAGCAATTACTTCATCTTCAGTCACCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524669.5