Pregenerated sensors for YBX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000065978Ensembl transcript IDs: ENST00000321358.12, ENST00000436427.1, ENST00000467957.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGATTCCTGATGTGCCACTCTGGCCTACTCCCGACCCCTACTGTCTaGTTCCCCTGGGCCCTGATAGCTGGCCAGGATGATCTGGAGTGT | + |
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Preference number: 1 (lower is better) Translates to: GFLMCHSGLLPTPTV*FPWALIAGQDDLEC Trigger: ACACTCCAGATCATCCTGGCCAGCTATCAGGGCCCAGGGGAAGCAGACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR GCA 90 bp | TCCCAAGCAGGAGATGACTTCCACAGCACTGCAGGATTCCTGATGTaGCACTCTGGCCTACTCCCGACCCCTACTGTCTGCTTCCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: SQAGDDFHSTAGFLM*HSGLLPTPTVCFPW Trigger: CCAGGGGAAGCAGACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTGTGGAAGTCATCTCCTGCTTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 90 bp | GTTAGTCCCAAGCAGGAGATGACTTCCACAGCACTGCAGGATTCCTaGTGTGCCACTCTGGCCTACTCCCGACCCCTACTGTCTGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: VSPKQEMTSTALQDS*CATLAYSRPLLSAS Trigger: GGAAGCAGACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTGTGGAAGTCATCTCCTGCTTGGGACTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 90 bp | GTCTCTTATCAAGTCCTCTGCAAAGAGTTAGTCCCAAGCAGGAGATaGCTTCCACAGCACTGCAGGATTCCTGATGTGCCACTCTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: VSYQVLCKELVPSRR*LPQHCRIPDVPLWP Trigger: AGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTGTGGAAGTCATCTCCTGCTTGGGACTAACTCTTTGCAGAGGACTTGATAAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 90 bp | ACTGAAACAAATTCTCCCAAGGTGACAAAACTAAGTGGAGCAGGATaGGAGTCTGGTCGGTCTAGGCTAGAGCAATGCCCTTTTAAACAA | + |
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Preference number: 1 (lower is better) Translates to: TETNSPKVTKLSGAG*ESGRSRLEQCPFKQ Trigger: TTGTTTAAAAGGGCATTGCTCTAGCCTAGACCGACCAGACTCTCATCCTGCTCCACTTAGTTTTGTCACCTTGGGAGAATTTGTTTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 90 bp | GGCAGTGTGACAGGTTGTCCTAACACTTCAATTGGCATCTTCAATTaGCACACTGAAACAAATTCTCCCAAGGTGACAAAACTAAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: GSVTGCPNTSIGIFN*HTETNSPKVTKLSG Trigger: TCCACTTAGTTTTGTCACCTTGGGAGAATTTGTTTCAGTGTGTCAATTGAAGATGCCAATTGAAGTGTTAGGACAACCTGTCACACTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 90 bp | TTGAAGTTTCAGGTCCACTGCACTCTTGCCAACACAGTATTTTCATaGACACCAGCAAGAAATAGGCTAACTCACTTCTGCAGTACAGAT | + |
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Preference number: 1 (lower is better) Translates to: LKFQVHCTLANTVFS*TPARNRLTHFCSTD Trigger: ATCTGTACTGCAGAAGTGAGTTAGCCTATTTCTTGCTGGTGTTCATGAAAATACTGTGTTGGCAAGAGTGCAGTGGACCTGAAACTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 90 bp | TGTGCGTCTGCAGTTGTAAGTAACAGTTTAGATGCTACCAACAGTTaGAGTTTCAGGTCCACTGCACTCTTGCCAACACAGTATTTTCAT | + |
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Preference number: 1 (lower is better) Translates to: CASAVVSNSLDATNS*SFRSTALLPTQYFH Trigger: ATGAAAATACTGTGTTGGCAAGAGTGCAGTGGACCTGAAACTTCAACTGTTGGTAGCATCTAAACTGTTACTTACAACTGCAGACGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 90 bp | AGGATGATCTGGAGTGTTTCGGGGCAGCAGTCACTATCAACTACATaGCTATTTCACAAAGCAAGCCAAAGAACATCTAACAAAACATTA | + |
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Preference number: 1 (lower is better) Translates to: RMIWSVSGQQSLSTT*LFHKASQRTSNKTL Trigger: TAATGTTTTGTTAGATGTTCTTTGGCTTGCTTTGTGAAATAGTCATGTAGTTGATAGTGACTGCTGCCCCGAAACACTCCAGATCATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR TCA 90 bp | CAGCACTGCAGGATTCCTGATGTGCCACTCTGGCCTACTCCCGACCCCTACTGTGATAGCTGGCCAGGATaGTCTGGAGTGTTTCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: QHCRIPDVPLWPTPDPYCDSWPG*SGVFRG Trigger: GCCCCGAAACACTCCAGATCATCCTGGCCAGCTATC...ACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR GCA 90 bp | CAGCACTGCAGGATTCCTGATGTGCCACTCTGGCCTACTCCCGACCCCTACTGTTGCCCTTTTAAACAATaGCTCACAGCCAAAGGGACC | + |
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Preference number: 2 (lower is better) Translates to: QHCRIPDVPLWPTPDPYCCPFKQ*LTAKGT Trigger: GGTCCCTTTGGCTGTGAGGCATTGTTTAAAAGGGCA...ACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR CCA 90 bp | CACAGCACTGCAGGATTCCTGATGTGCCACTCTGGCCTACTCCCGACCCCTACTGGTGACAAAACTAAGTaGAGCAGGATGAGAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: HSTAGFLMCHSGLLPTPTGDKTK*SRMRVW Trigger: CCAGACTCTCATCCTGCTCCACTTAGTTTTGTCACC...AGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGGATGATCTGGAGTGTTTCGGGGCAGCAGTCACTATCAACTACATGACTCTAAGTGGAGCAGGATaGGAGTCTGGTCGGTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: GQDDLECFGAAVTINYMTLSGAG*ESGRSR Trigger: CCTAGACCGACCAGACTCTCATCCTGCTCCACTTAG...AGTCATGTAGTTGATAGTGACTGCTGCCCCGAAACACTCCAGATCATCCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR GCA 90 bp | CACAGCACTGCAGGATTCCTGATGTGCCACTCTGGCCTACTCCCGACCCCTACTTCCTGGCTAACACAGTaGAACCCCATCTCTATTAAA | + |
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Preference number: 2 (lower is better) Translates to: HSTAGFLMCHSGLLPTPTSWLTQ*NPISIK Trigger: TTTAATAGAGATGGGGTTGCACTGTGTTAGCCAGGA...AGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCACTGCACTCTTGCCAACACAGTATTTTCATGAACACCAGCAAGAAATAGTCCCAAGCAGGAGATaGCTTCCACAGCACTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RSTALLPTQYFHEHQQEIVPSRR*LPQHCR Trigger: CCTGCAGTGCTGTGGAAGTCATCTCCTGCTTGGGAC...TATTTCTTGCTGGTGTTCATGAAAATACTGTGTTGGCAAGAGTGCAGTGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR CCA 90 bp | AGGTCCACTGCACTCTTGCCAACACAGTATTTTCATGAACACCAGCAAGAAATACTGGCCAGGATGATCTaGAGTGTTTCGGGGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RSTALLPTQYFHEHQQEILARMI*SVSGQQ Trigger: CTGCTGCCCCGAAACACTCCAGATCATCCTGGCCAG...TATTTCTTGCTGGTGTTCATGAAAATACTGTGTTGGCAAGAGTGCAGTGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGGATGATCTGGAGTGTTTCGGGGCAGCAGTCACTATCAACTACATGACTCTTCAATTGACACACTaGAACAAATTCTCCCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: GQDDLECFGAAVTINYMTLQLTH*NKFSQG Trigger: ACCTTGGGAGAATTTGTTTCAGTGTGTCAATTGAAG...AGTCATGTAGTTGATAGTGACTGCTGCCCCGAAACACTCCAGATCATCCTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR CCA 90 bp | GAAACTGCATTTAATGTTGGCAACACTGCAGTCAACTTACAATGGTTTCATTTACCTGATGTGCCACTCTaGCCTACTCCCGACCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: ETAFNVGNTAVNLQWFHLPDVPL*PTPDPY Trigger: GTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGG...TAAATGAAACCATTGTAAGTTGACTGCAGTGTTGCCAACATTAAATGCAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR TCA 90 bp | TTCCTAAGCAGCTTTCCCATGGGTTTTATATTACTTGTTTCCATCTCTAGGACACCACACCAGGCAGTGTaGCAGGTTGTCCTAACACTT | + |
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Preference number: 2 (lower is better) Translates to: FLSSFPMGFILLVSISRTPHQAV*QVVLTL Trigger: AAGTGTTAGGACAACCTGTCACACTGCCTGGTGTGG...TGTCCTAGAGATGGAAACAAGTAATATAAAACCCATGGGAAAGCTGCTTAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR CAA 90 bp | TATTACTTGTTTCCATCTCTAGGACATAAGGAGCTGAACCAATATTaGATGACCACACCAGGCAGTGTGACAGGTTGTCCTAACACTTCA | + |
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Preference number: 2 (lower is better) Translates to: YYLFPSLGHKELNQY*MTTPGSVTGCPNTS Trigger: TGAAGTGTTAGGACAACCTGTCACACTGCCTGGTGTGGTCATCAAATATTGGTTCAGCTCCTTATGTCCTAGAGATGGAAACAAGTAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCACTGCACTCTTGCCAACACAGTATTTTCATGAACACCAGCAAGAAATATCACTATCAACTACATaGCTATTTCACAAAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: RSTALLPTQYFHEHQQEISLSTT*LFHKAS Trigger: GCTTGCTTTGTGAAATAGTCATGTAGTTGATAGTGA...TATTTCTTGCTGGTGTTCATGAAAATACTGTGTTGGCAAGAGTGCAGTGGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR GCA 90 bp | TTCCTAAGCAGCTTTCCCATGGGTTTTATATTACTTGTTTCCATCTCTAGGACATCTAGGCTAGAGCAATaGCCTTTTAAACAATGCCTC | + |
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Preference number: 2 (lower is better) Translates to: FLSSFPMGFILLVSISRTSRLEQ*PFKQCL Trigger: GAGGCATTGTTTAAAAGGGCATTGCTCTAGCCTAGA...TGTCCTAGAGATGGAAACAAGTAATATAAAACCCATGGGAAAGCTGCTTAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR CCA 90 bp | TTCCTAAGCAGCTTTCCCATGGGTTTTATATTACTTGTTTCCATCTCTAGGACACATCTATTTGTAGACTaGGTCAAGCTAAGGGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: FLSSFPMGFILLVSISRTHLFVD*VKLRVL Trigger: TAGGACCCTTAGCTTGACCCAGTCTACAAATAGATG...TGTCCTAGAGATGGAAACAAGTAATATAAAACCCATGGGAAAGCTGCTTAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR GCA 72 bp | ATGTGCCACTCTGGCCTACTCCCGACCCCTACTGTCTaGTTCCCCTGGGCCCTGATAGCTGGCCAGGATGAT | + |
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Preference number: 3 (lower is better) Translates to: MCHSGLLPTPTV*FPWALIAGQDD Trigger: ATCATCCTGGCCAGCTATCAGGGCCCAGGGGAAGCAGACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR CCA 72 bp | CTTCCACAGCACTGCAGGATTCCTGATGTGCCACTCTaGCCTACTCCCGACCCCTACTGTCTGCTTCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: LPQHCRIPDVPL*PTPDPYCLLPL Trigger: CAGGGGAAGCAGACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTGTGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR GCA 72 bp | GGAGATGACTTCCACAGCACTGCAGGATTCCTGATGTaGCACTCTGGCCTACTCCCGACCCCTACTGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: GDDFHSTAGFLM*HSGLLPTPTVC Trigger: GCAGACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTGTGGAAGTCATCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 72 bp | TGTCTGCTTCCCCTGGGCCCTGATAGCTGGCCAGGATaGTCTGGAGTGTTTCGGGGCAGCAGTCACTATCAA | + |
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Preference number: 3 (lower is better) Translates to: CLLPLGPDSWPG*SGVFRGSSHYQ Trigger: TTGATAGTGACTGCTGCCCCGAAACACTCCAGATCATCCTGGCCAGCTATCAGGGCCCAGGGGAAGCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 72 bp | AAGCAGGAGATGACTTCCACAGCACTGCAGGATTCCTaGTGTGCCACTCTGGCCTACTCCCGACCCCTACTG | + |
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Preference number: 3 (lower is better) Translates to: KQEMTSTALQDS*CATLAYSRPLL Trigger: CAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTGTGGAAGTCATCTCCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR CAA 90 bp | CACAGCACTGCAGGATTCCTGATGTGCCACTCTGGCCTACTCCCGACCCCTACTGAGCTGAACCAATATTaGATGACCACACCAGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: HSTAGFLMCHSGLLPTPTELNQY*MTTPGS Trigger: ACTGCCTGGTGTGGTCATCAAATATTGGTTCAGCTC...AGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 72 bp | CAAGTCCTCTGCAAAGAGTTAGTCCCAAGCAGGAGATaGCTTCCACAGCACTGCAGGATTCCTGATGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: QVLCKELVPSRR*LPQHCRIPDVP Trigger: TGGCACATCAGGAATCCTGCAGTGCTGTGGAAGTCATCTCCTGCTTGGGACTAACTCTTTGCAGAGGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 72 bp | AATTCTCCCAAGGTGACAAAACTAAGTGGAGCAGGATaGGAGTCTGGTCGGTCTAGGCTAGAGCAATGCCCT | + |
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Preference number: 3 (lower is better) Translates to: NSPKVTKLSGAG*ESGRSRLEQCP Trigger: AGGGCATTGCTCTAGCCTAGACCGACCAGACTCTCATCCTGCTCCACTTAGTTTTGTCACCTTGGGAGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR GCA 72 bp | GGTCGGTCTAGGCTAGAGCAATGCCCTTTTAAACAATaGCTCACAGCCAAAGGGACCCACCCAAAATCTACA | + |
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Preference number: 3 (lower is better) Translates to: GRSRLEQCPFKQ*LTAKGTHPKST Trigger: TGTAGATTTTGGGTGGGTCCCTTTGGCTGTGAGGCATTGTTTAAAAGGGCATTGCTCTAGCCTAGACCGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 72 bp | CAGGTCCACTGCACTCTTGCCAACACAGTATTTTCATaGACACCAGCAAGAAATAGGCTAACTCACTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: QVHCTLANTVFS*TPARNRLTHFC Trigger: GCAGAAGTGAGTTAGCCTATTTCTTGCTGGTGTTCATGAAAATACTGTGTTGGCAAGAGTGCAGTGGACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR-3UTR CAA 90 bp | TTCCTAAGCAGCTTTCCCATGGGTTTTATATTACTTGTTTCCATCTCTAGGACAGTCCTAACACTTCAATaGGCATCTTCAATTGACACA | + |
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Preference number: 3 (lower is better) Translates to: FLSSFPMGFILLVSISRTVLTLQ*ASSIDT Trigger: TGTGTCAATTGAAGATGCCAATTGAAGTGTTAGGAC...TGTCCTAGAGATGGAAACAAGTAATATAAAACCCATGGGAAAGCTGCTTAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR TCA 72 bp | ACAGGTTGTCCTAACACTTCAATTGGCATCTTCAATTaGCACACTGAAACAAATTCTCCCAAGGTGACAAAA | + |
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Preference number: 3 (lower is better) Translates to: TGCPNTSIGIFN*HTETNSPKVTK Trigger: TTTTGTCACCTTGGGAGAATTTGTTTCAGTGTGTCAATTGAAGATGCCAATTGAAGTGTTAGGACAACCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR CCA 90 bp | CCTGATGTGCCACTCTGGCCTACTCCCGACCCCTACTGTCTGCTTCCCCTGGGCCCTGATGTGCCACTCTaGCCTACTCCCGACCCCTAC | + |
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Preference number: 4 (lower is better) Translates to: PDVPLWPTPDPYCLLPLGPDVPL*PTPDPY Trigger: GTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGG...GCCCAGGGGAAGCAGACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR CCA 90 bp | CCTGATGTGCCACTCTGGCCTACTCCCGACCCCTACTGTCTGCTTCCCCTGGGCCTGGCCAGGATGATCTaGAGTGTTTCGGGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PDVPLWPTPDPYCLLPLGLARMI*SVSGQQ Trigger: CTGCTGCCCCGAAACACTCCAGATCATCCTGGCCAG...GCCCAGGGGAAGCAGACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR TCA 90 bp | CCTGATGTGCCACTCTGGCCTACTCCCGACCCCTACTGTCTGCTTCCCCTGGGCCTAAGTGGAGCAGGATaGGAGTCTGGTCGGTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: PDVPLWPTPDPYCLLPLGLSGAG*ESGRSR Trigger: CCTAGACCGACCAGACTCTCATCCTGCTCCACTTAG...GCCCAGGGGAAGCAGACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR GCA 90 bp | CCTGATGTGCCACTCTGGCCTACTCCCGACCCCTACTGTCTGCTTCCCCTGGGCTCCTGGCTAACACAGTaGAACCCCATCTCTATTAAA | + |
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Preference number: 4 (lower is better) Translates to: PDVPLWPTPDPYCLLPLGSWLTQ*NPISIK Trigger: TTTAATAGAGATGGGGTTGCACTGTGTTAGCCAGGA...GCCCAGGGGAAGCAGACAGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR TCA 90 bp | TGCCCTTTTAAACAATGCCTCACAGCCAAAGGGACCCACCCAAAATCTACACTCGCACTGCAGGATTCCTaGTGTGCCACTCTGGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: CPFKQCLTAKGTHPKSTLALQDS*CATLAY Trigger: GTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGC...GAGTGTAGATTTTGGGTGGGTCCCTTTGGCTGTGAGGCATTGTTTAAAAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR TCA 90 bp | TGCCCTTTTAAACAATGCCTCACAGCCAAAGGGACCCACCCAAAATCTACACTCGTCCCAAGCAGGAGATaGCTTCCACAGCACTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CPFKQCLTAKGTHPKSTLVPSRR*LPQHCR Trigger: CCTGCAGTGCTGTGGAAGTCATCTCCTGCTTGGGAC...GAGTGTAGATTTTGGGTGGGTCCCTTTGGCTGTGAGGCATTGTTTAAAAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR GCA 90 bp | GAGGGAATTACCAGTGAGCATCATCTATTTGTAGACTGGGTCAAGCTAAGGGTCGCAGGATTCCTGATGTaGCACTCTGGCCTACTCCCG | + |
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Preference number: 4 (lower is better) Translates to: EGITSEHHLFVDWVKLRVAGFLM*HSGLLP Trigger: CGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGC...GACCCTTAGCTTGACCCAGTCTACAAATAGATGATGCTCACTGGTAATTCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR TCA 90 bp | AGGTCCACTGCACTCTTGCCAACACAGTATTTTCATGAACACCAGCAAGAAATAGATAGCTGGCCAGGATaGTCTGGAGTGTTTCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RSTALLPTQYFHEHQQEIDSWPG*SGVFRG Trigger: GCCCCGAAACACTCCAGATCATCCTGGCCAGCTATC...TATTTCTTGCTGGTGTTCATGAAAATACTGTGTTGGCAAGAGTGCAGTGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR GCA 90 bp | GGCCAGGATGATCTGGAGTGTTTCGGGGCAGCAGTCACTATCAACTACATGACTTCTAGGCTAGAGCAATaGCCTTTTAAACAATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GQDDLECFGAAVTINYMTSRLEQ*PFKQCL Trigger: GAGGCATTGTTTAAAAGGGCATTGCTCTAGCCTAGA...AGTCATGTAGTTGATAGTGACTGCTGCCCCGAAACACTCCAGATCATCCTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR CCA 90 bp | TTCCTAAGCAGCTTTCCCATGGGTTTTATATTACTTGTTTCCATCTCTAGGACAACTGTCTGCTTCCCCTaGGCCCTGATAGCTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: FLSSFPMGFILLVSISRTTVCFP*ALIAGQ Trigger: CTGGCCAGCTATCAGGGCCCAGGGGAAGCAGACAGT...TGTCCTAGAGATGGAAACAAGTAATATAAAACCCATGGGAAAGCTGCTTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR TCA 90 bp | GAGGGAATTACCAGTGAGCATCATCTATTTGTAGACTGGGTCAAGCTAAGGGTCGATGCTACCAACAGTTaGAGTTTCAGGTCCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: EGITSEHHLFVDWVKLRVDATNS*SFRSTA Trigger: TGCAGTGGACCTGAAACTTCAACTGTTGGTAGCATC...GACCCTTAGCTTGACCCAGTCTACAAATAGATGATGCTCACTGGTAATTCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR GCA 90 bp | TGCCCTTTTAAACAATGCCTCACAGCCAAAGGGACCCACCCAAAATCTACACTCAAGTTTCAGGTCCACTaGACTCTTGCCAACACAGTA | + |
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Preference number: 4 (lower is better) Translates to: CPFKQCLTAKGTHPKSTLKFQVH*TLANTV Trigger: TACTGTGTTGGCAAGAGTGCAGTGGACCTGAAACTT...GAGTGTAGATTTTGGGTGGGTCCCTTTGGCTGTGAGGCATTGTTTAAAAGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR TCA 90 bp | GGCCAGGATGATCTGGAGTGTTTCGGGGCAGCAGTCACTATCAACTACATGACTAACACAGTATTTTCATaGACACCAGCAAGAAATAGG | + |
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Preference number: 4 (lower is better) Translates to: GQDDLECFGAAVTINYMTNTVFS*TPARNR Trigger: CCTATTTCTTGCTGGTGTTCATGAAAATACTGTGTT...AGTCATGTAGTTGATAGTGACTGCTGCCCCGAAACACTCCAGATCATCCTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| 3UTR CAA 72 bp | TTTCCATCTCTAGGACATAAGGAGCTGAACCAATATTaGATGACCACACCAGGCAGTGTGACAGGTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: FPSLGHKELNQY*MTTPGSVTGCP Trigger: AGGACAACCTGTCACACTGCCTGGTGTGGTCATCAAATATTGGTTCAGCTCCTTATGTCCTAGAGATGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR CCA 90 bp | GAGGGAATTACCAGTGAGCATCATCTATTTGTAGACTGGGTCAAGCTAAGGGTCCATCTATTTGTAGACTaGGTCAAGCTAAGGGTCCTA | + |
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Preference number: 4 (lower is better) Translates to: EGITSEHHLFVDWVKLRVHLFVD*VKLRVL Trigger: TAGGACCCTTAGCTTGACCCAGTCTACAAATAGATG...GACCCTTAGCTTGACCCAGTCTACAAATAGATGATGCTCACTGGTAATTCCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR TCA 90 bp | GAAACTGCATTTAATGTTGGCAACACTGCAGTCAACTTACAATGGTTTCATTTACCACACCAGGCAGTGTaGCAGGTTGTCCTAACACTT | + |
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Preference number: 4 (lower is better) Translates to: ETAFNVGNTAVNLQWFHLPHQAV*QVVLTL Trigger: AAGTGTTAGGACAACCTGTCACACTGCCTGGTGTGG...TAAATGAAACCATTGTAAGTTGACTGCAGTGTTGCCAACATTAAATGCAGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR TCA 90 bp | GAGGGAATTACCAGTGAGCATCATCTATTTGTAGACTGGGTCAAGCTAAGGGTCTCACTATCAACTACATaGCTATTTCACAAAGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: EGITSEHHLFVDWVKLRVSLSTT*LFHKAS Trigger: GCTTGCTTTGTGAAATAGTCATGTAGTTGATAGTGA...GACCCTTAGCTTGACCCAGTCTACAAATAGATGATGCTCACTGGTAATTCCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR GCA 90 bp | TTCCTAAGCAGCTTTCCCATGGGTTTTATATTACTTGTTTCCATCTCTAGGACATGCCCTTTTAAACAATaGCTCACAGCCAAAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: FLSSFPMGFILLVSISRTCPFKQ*LTAKGT Trigger: GGTCCCTTTGGCTGTGAGGCATTGTTTAAAAGGGCA...TGTCCTAGAGATGGAAACAAGTAATATAAAACCCATGGGAAAGCTGCTTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR CCA 90 bp | TTCCTAAGCAGCTTTCCCATGGGTTTTATATTACTTGTTTCCATCTCTAGGACAGGTGACAAAACTAAGTaGAGCAGGATGAGAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FLSSFPMGFILLVSISRTGDKTK*SRMRVW Trigger: CCAGACTCTCATCCTGCTCCACTTAGTTTTGTCACC...TGTCCTAGAGATGGAAACAAGTAATATAAAACCCATGGGAAAGCTGCTTAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR TCA 90 bp | TTCCTAAGCAGCTTTCCCATGGGTTTTATATTACTTGTTTCCATCTCTAGGACACTTCAATTGACACACTaGAACAAATTCTCCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: FLSSFPMGFILLVSISRTLQLTH*NKFSQG Trigger: ACCTTGGGAGAATTTGTTTCAGTGTGTCAATTGAAG...TGTCCTAGAGATGGAAACAAGTAATATAAAACCCATGGGAAAGCTGCTTAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS TCA 90 bp | TGCGCCGCGCCCTCCGAGCACACGCGGAAGGGAGCTGGGTGGGGGTaGCGCGAACAACGGCGTGCGGGCCCGAGCGCACGAGGCCGGTCG | + |
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Preference number: 5 (lower is better) Translates to: CAAPSEHTRKGAGWG*REQRRAGPSARGRS Trigger: CGACCGGCCTCGTGCGCTCGGGCCCGCACGCCGTTGTTCGCGTCACCCCCACCCAGCTCCCTTCCGCGTGTGCTCGGAGGGCGCGGCGCA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436427.1 |
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| CDS GCA 90 bp | GCCGCGGACGGAGAGCACGTGAGGGAAGGGGAAGCCGCTCCGGCCTaGGTAGGCGGTGCGCCGCGCCCTCCGAGCACACGCGGAAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: AADGEHVREGEAAPA*VGGAPRPPSTRGRE Trigger: CTCCCTTCCGCGTGTGCTCGGAGGGCGCGGCGCACCGCCTACGCAGGCCGGAGCGGCTTCCCCTTCCCTCACGTGCTCTCCGTCCGCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436427.1 |
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| CDS GCA 90 bp | AGAGCACGTGAGGGAAGGGGAAGCCGCTCCGGCCTGCGTAGGCGGTaGGCCGCGCCCTCCGAGCACACGCGGAAGGGAGCTGGGTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: RAREGRGSRSGLRRR*AAPSEHTRKGAGWG Trigger: CCCCCACCCAGCTCCCTTCCGCGTGTGCTCGGAGGGCGCGGCGCACCGCCTACGCAGGCCGGAGCGGCTTCCCCTTCCCTCACGTGCTCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436427.1 |
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| CDS-3UTR CAA 90 bp | CACAGCACTGCAGGATTCCTGATGTGCCACTCTGGCCTACTCCCGACCCCTACTAGATGCTACCAACAGTaGAAGTTTCAGGTCCACTGC | + |
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Preference number: 5 (lower is better) Translates to: HSTAGFLMCHSGLLPTPTRCYQQ*KFQVHC Trigger: GCAGTGGACCTGAAACTTCAACTGTTGGTAGCATCT...AGTAGGGGTCGGGAGTAGGCCAGAGTGGCACATCAGGAATCCTGCAGTGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR CAA 90 bp | TGCCCTTTTAAACAATGCCTCACAGCCAAAGGGACCCACCCAAAATCTACACTCAAACTGCATTTAATGTaGGCAACACTGCAGTCAACT | + |
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Preference number: 5 (lower is better) Translates to: CPFKQCLTAKGTHPKSTLKLHLM*ATLQST Trigger: AGTTGACTGCAGTGTTGCCAACATTAAATGCAGTTT...GAGTGTAGATTTTGGGTGGGTCCCTTTGGCTGTGAGGCATTGTTTAAAAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS-3UTR CAA 90 bp | AGGTCCACTGCACTCTTGCCAACACAGTATTTTCATGAACACCAGCAAGAAATAGTCCTAACACTTCAATaGGCATCTTCAATTGACACA | + |
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Preference number: 5 (lower is better) Translates to: RSTALLPTQYFHEHQQEIVLTLQ*ASSIDT Trigger: TGTGTCAATTGAAGATGCCAATTGAAGTGTTAGGAC...TATTTCTTGCTGGTGTTCATGAAAATACTGTGTTGGCAAGAGTGCAGTGGACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321358.12 |
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| CDS GCA 72 bp | GGGCAGGCCCGGGGCGCGGGCCCCAGGATGGGTGTGTaGGCAGGCCGCGGACGGAGAGCACGTGAGGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GQARGAGPRMGV*AGRGRRAREGR Trigger: CCTTCCCTCACGTGCTCTCCGTCCGCGGCCTGCGCACACACCCATCCTGGGGCCCGCGCCCCGGGCCTGCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436427.1 |
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| CDS CCA 72 bp | GTGCGCCGCGCCCTCCGAGCACACGCGGAAGGGAGCTaGGTGGGGGTGACGCGAACAACGGCGTGCGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: VRRALRAHAEGS*VGVTRTTACGP Trigger: GGGCCCGCACGCCGTTGTTCGCGTCACCCCCACCCAGCTCCCTTCCGCGTGTGCTCGGAGGGCGCGGCGCAC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436427.1 |
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| CDS GCA 72 bp | GGAGAGCACGTGAGGGAAGGGGAAGCCGCTCCGGCCTaGGTAGGCGGTGCGCCGCGCCCTCCGAGCACACGC | + |
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Preference number: 6 (lower is better) Translates to: GEHVREGEAAPA*VGGAPRPPSTR Trigger: GCGTGTGCTCGGAGGGCGCGGCGCACCGCCTACGCAGGCCGGAGCGGCTTCCCCTTCCCTCACGTGCTCTCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436427.1 |
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| CDS CCA 72 bp | CGATTACCAGCTATCCTTTTCCAAATCCGCCCGGCTTaGGCATCCGGTCCCTCGCACGCCGGCCGCCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RLPAILFQIRPA*ASGPSHAGRRG Trigger: GCCGCGGCGGCCGGCGTGCGAGGGACCGGATGCCCAAGCCGGGCGGATTTGGAAAAGGATAGCTGGTAATCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467957.1 |
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| CDS CAA 72 bp | TGTCATTCCAGCTATCCTTTTCCAAATCCGCCCGGCTaGGGCATCCGGTCCCTCGCACGCCGGCCGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: CHSSYPFPNPPG*GIRSLARRPPR Trigger: CCGCGGCGGCCGGCGTGCGAGGGACCGGATGCCCAAGCCGGGCGGATTTGGAAAAGGATAGCTGGAATGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436427.1 |
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| CDS CAA 72 bp | ACGATTACCAGCTATCCTTTTCCAAATCCGCCCGGCTaGGGCATCCGGTCCCTCGCACGCCGGCCGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: TITSYPFPNPPG*GIRSLARRPPR Trigger: CCGCGGCGGCCGGCGTGCGAGGGACCGGATGCCCAAGCCGGGCGGATTTGGAAAAGGATAGCTGGTAATCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467957.1 |
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