Pregenerated sensors for XPA (Homo sapiens)
Ensembl gene IDs: ENSG00000136936Ensembl transcript IDs: ENST00000375128.5, ENST00000462523.5, ENST00000485042.1, ENST00000496104.1
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCAATCTAGGGTTTGCCTTGGTATCTTGTCCTCAAATTTGTAGCTaGCCTACCACTTCTGCACCTACTCTAGCACTCAGCTCCCATCTC | + |
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Preference number: 1 (lower is better) Translates to: PNLGFALVSCPQICS*PTTSAPTLALSSHL Trigger: GAGATGGGAGCTGAGTGCTAGAGTAGGTGCAGAAGTGGTAGGTCAGCTACAAATTTGAGGACAAGATACCAAGGCAAACCCTAGATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR TCA 90 bp | GCAATCACAGACATGACATTGTGCACACAACCAGGCCAGGTGACCTTCACTGAACACAACCAGGCCAGGTaGCCTTCACTGAAACTTGCT | + |
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Preference number: 2 (lower is better) Translates to: AITDMTLCTQPGQVTFTEHNQAR*PSLKLA Trigger: AGCAAGTTTCAGTGAAGGTCACCTGGCCTGGTTGTG...TTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR CCA 90 bp | GCAATCACAGACATGACATTGTGCACACAACCAGGCCAGGTGACCTTCACTGAACACATGACTAGAACCTaGGGTACAGTGGTGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: AITDMTLCTQPGQVTFTEHMTRT*GTVVHH Trigger: GTGGTGCACCACTGTACCCCAGGTTCTAGTCATGTG...TTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR TCA 90 bp | GCAATCACAGACATGACATTGTGCACACAACCAGGCCAGGTGACCTTCACTGAAAGGCAATCACAGACATaGCATTGTGCACACAACCAG | + |
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Preference number: 2 (lower is better) Translates to: AITDMTLCTQPGQVTFTERQSQT*HCAHNQ Trigger: CTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCT...TTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR CAA 90 bp | CTCAGCTCCCATCTCTGTTGTAAGAAGGCAATCACAGACATGACATaGTGCACACAACCAGGCCAGGTGACCTTCACTGAAACTTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LSSHLCCKKAITDMT*CTQPGQVTFTETCF Trigger: AAAGCAAGTTTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCTTCTTACAACAGAGATGGGAGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR TCA 90 bp | CTAGAACCTGGGGTACAGTGGTGCACCACCATTGCTATTATTTGTTTCTTGGTTCACAACCAGGCCAGGTaGCCTTCACTGAAACTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LEPGVQWCTTIAIICFLVHNQAR*PSLKLA Trigger: AGCAAGTTTCAGTGAAGGTCACCTGGCCTGGTTGTG...AACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCCCAGGTTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR GCA 90 bp | CTAGAACCTGGGGTACAGTGGTGCACCACCATTGCTATTATTTGTTTCTTGGTTACAGACATGACATTGTaGACACAACCAGGCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LEPGVQWCTTIAIICFLVTDMTL*TQPGQV Trigger: CACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGT...AACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCCCAGGTTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR CCA 90 bp | GCAATCACAGACATGACATTGTGCACACAACCAGGCCAGGTGACCTTCACTGAAGTGTCAGCTTCTTTGTaGATCAAAATCAGAAGACCA | + |
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Preference number: 2 (lower is better) Translates to: AITDMTLCTQPGQVTFTEVSASL*IKIRRP Trigger: TGGTCTTCTGATTTTGATCCACAAAGAAGCTGACAC...TTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| 3UTR-3UTR GCA 90 bp | ATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGAACCCTTTTCCCCCCTTTTCCACACGCTaGTTCTTACTGCTCGCCGCA | + |
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Preference number: 2 (lower is better) Translates to: IICFLVKNPVQPLLNPFPPFSTR*FLLLAA Trigger: TGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGG...GGGAAAAGGGTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAAT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| 3UTR-3UTR TCA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTCAGTTCAGCCTTTGTTaGACCCTTTTCCCTCTACCC | + |
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Preference number: 2 (lower is better) Translates to: SMFISAIRAFSSSSSPLFQFSLC*TLFPLP Trigger: GGGTAGAGGGAAAAGGGTTCAACAAAGGCTGAACTG...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR GCA 90 bp | CAGACTCGTACAACTCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAACAGACATGACATTGTaGACACAACCAGGCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: QTRTTQCLFLLLGLFPAVTDMTL*TQPGQV Trigger: CACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGT...TACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGTACGAGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR GCA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTCTGACCTACCACTTCTaGACCTACTCTAGCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: SMFISAIRAFSSSSSPLFLTYHF*TYSSTQ Trigger: CTGAGTGCTAGAGTAGGTGCAGAAGTGGTAGGTCAG...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR GCA 90 bp | CAGACTCGTACAACTCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTACCTGGGGTACAGTGGTaGACCACCATTGCTATTATT | + |
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Preference number: 2 (lower is better) Translates to: QTRTTQCLFLLLGLFPAVPGVQW*TTIAII Trigger: AATAATAGCAATGGTGGTGCACCACTGTACCCCAGG...TACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGTACGAGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR TCA 90 bp | ATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGAACCCTTTTCCCCCTCAAATTTGTAGCTaGCCTACCACTTCTGCACCT | + |
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Preference number: 2 (lower is better) Translates to: IICFLVKNPVQPLLNPFPPQICS*PTTSAP Trigger: AGGTGCAGAAGTGGTAGGTCAGCTACAAATTTGAGG...GGGAAAAGGGTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR GCA 90 bp | GGGTACAGTGGTGCACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGGTGGTGCACCACCATTaGTATTATTTGTTTCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: GYSGAPPLLLFVSWLRIQVVHHH*YYLFLG Trigger: ACCAAGAAACAAATAATAGCAATGGTGGTGCACCAC...CTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR TCA 90 bp | ATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGAACCCTTTTCCCCCAGGTGACCTTCACTaGAACTTGCTTTTAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: IICFLVKNPVQPLLNPFPPGDLH*NLLLSH Trigger: ATGGCTTAAAAGCAAGTTTCAGTGAAGGTCACCTGG...GGGAAAAGGGTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR TCA 90 bp | ACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGAACAGGCAATCACAGACATaGCATTGTGCACACAACCAG | + |
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Preference number: 2 (lower is better) Translates to: TIAIICFLVKNPVQPLLNRQSQT*HCAHNQ Trigger: CTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCT...GTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR GCA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTGTGGTGCACCACCATTaGTATTATTTGTTTCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SMFISAIRAFSSSSSPLFVVHHH*YYLFLG Trigger: ACCAAGAAACAAATAATAGCAATGGTGGTGCACCAC...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR CCA 90 bp | TGCACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTCATATGTCAGTTCATaGCCACACATAGTACAAGTC | + |
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Preference number: 2 (lower is better) Translates to: CTTIAIICFLVKNPVQPLSYVSS*PHIVQV Trigger: GACTTGTACTATGTGTGGCCATGAACTGACATATGA...CAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| 3UTR-3UTR CAA 90 bp | GCAATCACAGACATGACATTGTGCACACAACCAGGCCAGGTGACCTTCACTGAAATCACAGACATGACATaGTGCACACAACCAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: AITDMTLCTQPGQVTFTEITDMT*CTQPGQ Trigger: CTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGAT...TTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCTCCCATCTCTGTTGTAAGAAGGCAATCACAGACATGACATTGTGCACACCAGTTCAGCCTTTGTaGAACCCTTTTCCCTCTACC | + |
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Preference number: 3 (lower is better) Translates to: LSSHLCCKKAITDMTLCTPVQPL*NPFPST Trigger: GGTAGAGGGAAAAGGGTTCAACAAAGGCTGAACTGG...TGTGCACAATGTCATGTCTGTGATTGCCTTCTTACAACAGAGATGGGAGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR GCA 72 bp | CATGTTGATGAACAATCGTCTCCCTTTTCCACACGCTaGTTCTTACTGCTCGCCGCAATTCTTCCCATAAAG | + |
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Preference number: 3 (lower is better) Translates to: HVDEQSSPFSTR*FLLLAAILPIK Trigger: CTTTATGGGAAGAATTGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGGAGACGATTGTTCATCAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCTCCCATCTCTGTTGTAAGAAGGCAATCACAGACATGACATTGTGCACAACTGTGTCAGCTTCTTaGTGGATCAAAATCAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: LSSHLCCKKAITDMTLCTTVSAS*WIKIRR Trigger: TCTTCTGATTTTGATCCACAAAGAAGCTGACACAGT...TGTGCACAATGTCATGTCTGTGATTGCCTTCTTACAACAGAGATGGGAGCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| 3UTR-3UTR CAA 90 bp | CTAGAACCTGGGGTACAGTGGTGCACCACCATTGCTATTATTTGTTTCTTGGTTAATCTAGGGTTTGCCTaGGTATCTTGTCCTCAAATT | + |
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Preference number: 3 (lower is better) Translates to: LEPGVQWCTTIAIICFLVNLGFA*VSCPQI Trigger: AATTTGAGGACAAGATACCAAGGCAAACCCTAGATT...AACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCCCAGGTTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR CAA 90 bp | GGGTACAGTGGTGCACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGAATCTAGGGTTTGCCTaGGTATCTTGTCCTCAAATT | + |
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Preference number: 3 (lower is better) Translates to: GYSGAPPLLLFVSWLRIQNLGFA*VSCPQI Trigger: AATTTGAGGACAAGATACCAAGGCAAACCCTAGATT...CTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| 3UTR-3UTR CAA 90 bp | ACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGTGGTCCATACTCATGTaGATGAACAATCGTCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: TTIAIICFLVKNPVQPLLWSILM*MNNRLP Trigger: AGGGAGACGATTGTTCATCAACATGAGTATGGACCA...CAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| CDS-3UTR CCA 90 bp | GACATGACATTGTGCACACAACCAGGCCAGGTGACCTTCACTGAAACTTGCTTTGCAGCCAGCCGGGCCTaGCGCAGCATCAGTGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: DMTLCTQPGQVTFTETCFAASRA*RSISAR Trigger: GCGGGCACTGATGCTGCGCCAGGCCCGGCTGGCTGC...AAAGCAAGTTTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | CATCTCTGTTGTAAGAAGGCAATCACAGACATGACATTGTGCACACAACCAGGCCTGGCGCAGCATCAGTaGCCGCTGCCGCTTCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: HLCCKKAITDMTLCTQPGLAQHQ*PLPLPL Trigger: GAGCGGAAGCGGCAGCGGGCACTGATGCTGCGCCAG...GCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCTTCTTACAACAGAGATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR CCA 90 bp | GCAATCACAGACATGACATTGTGCACACAACCAGGCCAGGTGACCTTCACTGAAAGTCTCAGCCCTTTGTaGCCTATTCAGGAAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: AITDMTLCTQPGQVTFTESLSPL*PIQEGG Trigger: CCCGCCTTCCTGAATAGGCCACAAAGGGCTGAGACT...TTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTGGCAGCTCCGCGGGTTaGTCTAAAGCCGCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SMFISAIRAFSSSSSPLFGSSAG*SKAAAS Trigger: GGAGGCGGCGGCTTTAGAGCAACCCGCGGAGCTGCC...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | CATACTCATGTTGATGAACAATCGTCTCCCTTTTCCACACGCTGCTTCTTACTGAGCATCAGTGCCCGCTaGCGCTTCCGCTCGATACTC | + |
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Preference number: 4 (lower is better) Translates to: HTHVDEQSSPFSTRCFLLSISAR*RFRSIL Trigger: GAGTATCGAGCGGAAGCGGCAGCGGGCACTGATGCT...CAGTAAGAAGCAGCGTGTGGAAAAGGGAGACGATTGTTCATCAACATGAGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| CDS-3UTR CCA 90 bp | ACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGAACGCAGCCAGCCGGGCCTaGCGCAGCATCAGTGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: TIAIICFLVKNPVQPLLNAASRA*RSISAR Trigger: GCGGGCACTGATGCTGCGCCAGGCCCGGCTGGCTGC...GTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | ACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGGGCAGCTCCGCGGGTTaGTCTAAAGCCGCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TTIAIICFLVKNPVQPLLGSSAG*SKAAAS Trigger: GGAGGCGGCGGCTTTAGAGCAACCCGCGGAGCTGCC...CAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | GCAATCACAGACATGACATTGTGCACACAACCAGGCCAGGTGACCTTCACTGAACACGCTGCTTCTTACTaGTCGCCGCAATTCTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: AITDMTLCTQPGQVTFTEHAASY*SPQFFY Trigger: GTAAAAGAATTGCGGCGAGCAGTAAGAAGCAGCGTG...TTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375128.5 |
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| CDS-3UTR GCA 90 bp | CTTCTGGTCCATACTCATGTTGATGAACAATCGTCTCCCTTTTCCACACGCTGCCTGACCTACCACTTCTaGACCTACTCTAGCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: LLVHTHVDEQSSPFSTRCLTYHF*TYSSTQ Trigger: CTGAGTGCTAGAGTAGGTGCAGAAGTGGTAGGTCAG...GCAGCGTGTGGAAAAGGGAGACGATTGTTCATCAACATGAGTATGGACCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| CDS-3UTR TCA 90 bp | GACATGACATTGTGCACACAACCAGGCCAGGTGACCTTCACTGAAACTTGCTTTAGGCAATCACAGACATaGCATTGTGCACACAACCAG | + |
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Preference number: 4 (lower is better) Translates to: DMTLCTQPGQVTFTETCFRQSQT*HCAHNQ Trigger: CTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCT...AAAGCAAGTTTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTAGCATCAGTGCCCGCTaGCGCTTCCGCTCGATACTC | + |
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Preference number: 4 (lower is better) Translates to: SMFISAIRAFSSSSSPLFSISAR*RFRSIL Trigger: GAGTATCGAGCGGAAGCGGCAGCGGGCACTGATGCT...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | GGGTACAGTGGTGCACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGCCCTTTTCCACACGCTaGTTCTTACTGCTCGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GYSGAPPLLLFVSWLRIQPFSTR*FLLLAA Trigger: TGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGG...CTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | ATCACAGACATGACATTGTGCACACAACCAGGCCAGGTGACCTTCACTGAAACTCCTGGGGTACAGTGGTaGACCACCATTGCTATTATT | + |
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Preference number: 4 (lower is better) Translates to: ITDMTLCTQPGQVTFTETPGVQW*TTIAII Trigger: AATAATAGCAATGGTGGTGCACCACTGTACCCCAGG...AGTTTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR TCA 90 bp | GTGTCAGCTTCTTTGTGGATCAAAATCAGAAGACCAAGAGGAACCAGGTTCCAACAGTTCAGCCTTTGTTaGACCCTTTTCCCTCTACCC | + |
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Preference number: 4 (lower is better) Translates to: VSASLWIKIRRPRGTRFQQFSLC*TLFPLP Trigger: GGGTAGAGGGAAAAGGGTTCAACAAAGGCTGAACTG...TTGGAACCTGGTTCCTCTTGGTCTTCTGATTTTGATCCACAAAGAAGCTGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | GTGTCAGCTTCTTTGTGGATCAAAATCAGAAGACCAAGAGGAACCAGGTTCCAAACAGACATGACATTGTaGACACAACCAGGCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: VSASLWIKIRRPRGTRFQTDMTL*TQPGQV Trigger: CACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGT...TTGGAACCTGGTTCCTCTTGGTCTTCTGATTTTGATCCACAAAGAAGCTGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| 3UTR CAA 72 bp | CATCTCTGTTGTAAGAAGGCAATCACAGACATGACATaGTGCACACAACCAGGCCAGGTGACCTTCACTGAA | + |
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Preference number: 4 (lower is better) Translates to: HLCCKKAITDMT*CTQPGQVTFTE Trigger: TTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCTTCTTACAACAGAGATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR TCA 90 bp | CTCAGCTCCCATCTCTGTTGTAAGAAGGCAATCACAGACATGACATTGTGCACACTTCCTCTTCTAAAATaGAGCCTCCTCCTGTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LSSHLCCKKAITDMTLCTLPLLK*SLLLCQ Trigger: TTGACACAGGAGGAGGCTTCATTTTAGAAGAGGAAG...TGTGCACAATGTCATGTCTGTGATTGCCTTCTTACAACAGAGATGGGAGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | GGGTACAGTGGTGCACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGCTGACCTACCACTTCTaGACCTACTCTAGCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: GYSGAPPLLLFVSWLRIQLTYHF*TYSSTQ Trigger: CTGAGTGCTAGAGTAGGTGCAGAAGTGGTAGGTCAG...CTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR TCA 90 bp | ACTGCTCGCCGCAATTCTTCCCATAAAGAAGTAAACTGTGTCAGCTTCTTTGTGCCAGGTGACCTTCACTaGAACTTGCTTTTAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TARRNSSHKEVNCVSFFVPGDLH*NLLLSH Trigger: ATGGCTTAAAAGCAAGTTTCAGTGAAGGTCACCTGG...CACAAAGAAGCTGACACAGTTTACTTCTTTATGGGAAGAATTGCGGCGAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
||
| CDS-3UTR TCA 90 bp | CAGACTCGTACAACTCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTACACAACCAGGCCAGGTaGCCTTCACTGAAACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTRTTQCLFLLLGLFPAVHNQAR*PSLKLA Trigger: AGCAAGTTTCAGTGAAGGTCACCTGGCCTGGTTGTG...TACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGTACGAGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR GCA 90 bp | CAGACTCGTACAACTCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTACACGCTGCTTCTTACTaGTCGCCGCAATTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTRTTQCLFLLLGLFPAVHAASY*SPQFFP Trigger: TGGGAAGAATTGCGGCGAGCAGTAAGAAGCAGCGTG...TACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGTACGAGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462523.5 |
||
| CDS-3UTR CCA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTCACATGACTAGAACCTaGGGTACAGTGGTGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SMFISAIRAFSSSSSPLFHMTRT*GTVVHH Trigger: GTGGTGCACCACTGTACCCCAGGTTCTAGTCATGTG...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR CCA 90 bp | GTGGATCAAAATCAGAAGACCAAGAGGAACCAGGTTCCAATTTCTTTTCAACTACACATGACTAGAACCTaGGGTACAGTGGTGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VDQNQKTKRNQVPISFQLHMTRT*GTVVHH Trigger: GTGGTGCACCACTGTACCCCAGGTTCTAGTCATGTG...TAGTTGAAAAGAAATTGGAACCTGGTTCCTCTTGGTCTTCTGATTTTGATCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462523.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTTCTTACTGCTCGCCGCAATTCTTCCCATAAAGAAGTAAACTGTGTCAGCTCTTCTAATGCTTCTTaGCTACCCCAAACTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLTARRNSSHKEVNCVSSSNAS*LPQTSR Trigger: TCTTGAAGTTTGGGGTAGTCAAGAAGCATTAGAAGA...GCTGACACAGTTTACTTCTTTATGGGAAGAATTGCGGCGAGCAGTAAGAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| CDS-3UTR TCA 90 bp | CAGACTCGTACAACTCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTACAGTTCAGCCTTTGTTaGACCCTTTTCCCTCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: QTRTTQCLFLLLGLFPAVQFSLC*TLFPLP Trigger: GGGTAGAGGGAAAAGGGTTCAACAAAGGCTGAACTG...TACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGTACGAGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCTTACTGCTCGCCGCAATTCTTCCCATAAAGAAGTAAACTGTGTCAGCTATCATCAGCATCTCTaGAGTTATCACAAGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLTARRNSSHKEVNCVSYHQHL*SYHKLA Trigger: TGCCAACTTGTGATAACTGCAGAGATGCTGATGATA...GCTGACACAGTTTACTTCTTTATGGGAAGAATTGCGGCGAGCAGTAAGAAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462523.5 |
||
| CDS-3UTR GCA 90 bp | ACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGAACCCCTTTTCCACACGCTaGTTCTTACTGCTCGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TIAIICFLVKNPVQPLLNPFSTR*FLLLAA Trigger: TGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGG...GTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR CCA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTGAACCTGGGGTACAGTaGTGCACCACCATTGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: SMFISAIRAFSSSSSPLFEPGVQ*CTTIAI Trigger: AATAGCAATGGTGGTGCACCACTGTACCCCAGGTTC...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR CCA 90 bp | CAGACTCGTACAACTCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGAACCTGGGGTACAGTaGTGCACCACCATTGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: QTRTTQCLFLLLGLFPAVEPGVQ*CTTIAI Trigger: AATAGCAATGGTGGTGCACCACTGTACCCCAGGTTC...TACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGTACGAGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCTTACTGCTCGCCGCAATTCTTCCCATAAAGAAGTAAACTGTGTCAGCGTGTCAGCTTCTTTGTaGATCAAAATCAGAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLTARRNSSHKEVNCVSVSASL*IKIRRP Trigger: TGGTCTTCTGATTTTGATCCACAAAGAAGCTGACAC...GCTGACACAGTTTACTTCTTTATGGGAAGAATTGCGGCGAGCAGTAAGAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
||
| CDS-3UTR TCA 90 bp | GGGTACAGTGGTGCACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTCACCCCATTGTGAATaGTGTGGATTCTTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GYSGAPPLLLFVSWLRIQSPHCE*CGFFFT Trigger: TGTGAAGAAGAATCCACATCATTCACAATGGGGTGA...CTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR TCA 90 bp | CTAGAACCTGGGGTACAGTGGTGCACCACCATTGCTATTATTTGTTTCTTGGTTCATATCACCCCATTGTaGATGATGTGGATTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEPGVQWCTTIAIICFLVHITPL*MMWILL Trigger: AAGAAGAATCCACATCATTCACAATGGGGTGATATG...AACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCCCAGGTTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR TCA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTAGGCAATCACAGACATaGCATTGTGCACACAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SMFISAIRAFSSSSSPLFRQSQT*HCAHNQ Trigger: CTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCT...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR TCA 90 bp | TCAGACTCGTACAACTCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTCCTCAAATTTGTAGCTaGCCTACCACTTCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SDSYNSMFISAIRAFSSSPQICS*PTTSAP Trigger: AGGTGCAGAAGTGGTAGGTCAGCTACAAATTTGAGG...ACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGTACGAGTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR TCA 90 bp | TGTGGATCAAAATCAGAAGACCAAGAGGAACCAGGTTCCAATTTCTTTTCAACTCCTCAAATTTGTAGCTaGCCTACCACTTCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CGSKSEDQEEPGSNFFSTPQICS*PTTSAP Trigger: AGGTGCAGAAGTGGTAGGTCAGCTACAAATTTGAGG...AGTTGAAAAGAAATTGGAACCTGGTTCCTCTTGGTCTTCTGATTTTGATCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462523.5 |
||
| CDS-3UTR GCA 90 bp | CTAGAACCTGGGGTACAGTGGTGCACCACCATTGCTATTATTTGTTTCTTGGTTGTGGTGCACCACCATTaGTATTATTTGTTTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEPGVQWCTTIAIICFLVVVHHH*YYLFLG Trigger: ACCAAGAAACAAATAATAGCAATGGTGGTGCACCAC...AACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCCCAGGTTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR TCA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTCCAGGTGACCTTCACTaGAACTTGCTTTTAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SMFISAIRAFSSSSSPLFPGDLH*NLLLSH Trigger: ATGGCTTAAAAGCAAGTTTCAGTGAAGGTCACCTGG...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR GCA 90 bp | ACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGAACACAGACATGACATTGTaGACACAACCAGGCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TIAIICFLVKNPVQPLLNTDMTL*TQPGQV Trigger: CACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGT...GTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR GCA 90 bp | ACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGCCTGGGGTACAGTGGTaGACCACCATTGCTATTATT | + |
|
Preference number: 4 (lower is better) Translates to: TTIAIICFLVKNPVQPLLPGVQW*TTIAII Trigger: AATAATAGCAATGGTGGTGCACCACTGTACCCCAGG...CAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR TCA 90 bp | ACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGCTTCCTCTTCTAAAATaGAGCCTCCTCCTGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TTIAIICFLVKNPVQPLLLPLLK*SLLLCQ Trigger: TTGACACAGGAGGAGGCTTCATTTTAGAAGAGGAAG...CAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | ACAACTCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACGTGGTGCACCACCATTaGTATTATTTGTTTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTQCLFLLLGLFPAVVPHVVHHH*YYLFLG Trigger: ACCAAGAAACAAATAATAGCAATGGTGGTGCACCAC...GTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR TCA 90 bp | ACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGTCACCCCATTGTGAATaGTGTGGATTCTTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TTIAIICFLVKNPVQPLLSPHCE*CGFFFT Trigger: TGTGAAGAAGAATCCACATCATTCACAATGGGGTGA...CAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR GCA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTTATCATCAGCATCTCTaGAGTTATCACAAGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SMFISAIRAFSSSSSPLFYHQHL*SYHKLA Trigger: TGCCAACTTGTGATAACTGCAGAGATGCTGATGATA...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR CCA 90 bp | TGCACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTCCATAACAGGTCCTaGTTGATGAACAACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTTIAIICFLVKNPVQPLFHNRS*LMNNFS Trigger: GGAAAAGTTGTTCATCAACCAGGACCTGTTATGGAA...CAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR CCA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTTTCCATAACAGGTCCTaGTTGATGAACAACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SMFISAIRAFSSSSSPLFFHNRS*LMNNFS Trigger: GGAAAAGTTGTTCATCAACCAGGACCTGTTATGGAA...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR CCA 90 bp | ACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGTCATATGTCAGTTCATaGCCACACATAGTACAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TTIAIICFLVKNPVQPLLSYVSS*PHIVQV Trigger: GACTTGTACTATGTGTGGCCATGAACTGACATATGA...CAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR TCA 90 bp | ACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGAACTCTTCTAATGCTTCTTaGCTACCCCAAACTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TIAIICFLVKNPVQPLLNSSNAS*LPQTSR Trigger: TCTTGAAGTTTGGGGTAGTCAAGAAGCATTAGAAGA...GTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS GCA 90 bp | TTCCGCTCGATACTCGCCCGCACCGAGGCAGGCAGCTCCGCGGGTTaGTCTAAAGCCGCCGCCTCCGGCAAAGCCCCGTCGGCCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FRSILARTEAGSSAG*SKAAASGKAPSAAA Trigger: GGCGGCGGCCGACGGGGCTTTGCCGGAGGCGGCGGCTTTAGAGCAACCCGCGGAGCTGCCTGCCTCGGTGCGGGCGAGTATCGAGCGGAA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS GCA 90 bp | GGCTGCTTTTACATTAGCCATGCCGAGGCAGGCAGCTCCGCGGGTTaGTCTAAAGCCGCCGCCTCCGGCAAAGCCCCGTCGGCCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GCFYISHAEAGSSAG*SKAAASGKAPSAAA Trigger: GGCGGCGGCCGACGGGGCTTTGCCGGAGGCGGCGGCTTTAGAGCAACCCGCGGAGCTGCCTGCCTCGGCATGGCTAATGTAAAAGCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496104.1 |
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| CDS GCA 90 bp | GTCCATACTCATGTTGATGAACAATCGTCTCCCTTTTCCACACGCTaGTTCTTACTGCTCGCCGCAATTCTCACTAGTTCGGCCTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VHTHVDEQSSPFSTR*FLLLAAILTSSACE Trigger: TTCACAGGCCGAACTAGTGAGAATTGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGGAGACGATTGTTCATCAACATGAGTATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485042.1 |
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| CDS-3UTR CAA 90 bp | GTGTCAGCTTCTTTGTGGATCAAAATCAGAAGACCAAGAGGAACCAGGTTCCAATCCAGTCTCAGCCCTTaGTGGCCTATTCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VSASLWIKIRRPRGTRFQSSLSP*WPIQEG Trigger: GCCTTCCTGAATAGGCCACAAAGGGCTGAGACTGGA...TTGGAACCTGGTTCCTCTTGGTCTTCTGATTTTGATCCACAAAGAAGCTGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| CDS-3UTR CAA 90 bp | CATACTCATGTTGATGAACAATCGTCTCCCTTTTCCACACGCTGCTTCTTACTGCCAGTTCAGCCTTTGTaGAACCCTTTTCCCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: HTHVDEQSSPFSTRCFLLPVQPL*NPFPST Trigger: GGTAGAGGGAAAAGGGTTCAACAAAGGCTGAACTGG...CAGTAAGAAGCAGCGTGTGGAAAAGGGAGACGATTGTTCATCAACATGAGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| CDS-3UTR CAA 90 bp | GAACAATCGTCTCCCTTTTCCACACGCTGCTTCTTACTGCTCGCCGCAATTCTTCATAACAGGTCCTGGTaGATGAACAACTTTTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EQSSPFSTRCFLLLAAILHNRSW*MNNFSN Trigger: ATTGGAAAAGTTGTTCATCAACCAGGACCTGTTATG...AAGAATTGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGGAGACGATTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462523.5 |
||
| CDS-3UTR CAA 90 bp | CATCTCTGTTGTAAGAAGGCAATCACAGACATGACATTGTGCACACAACCAGGCCCTGTCGGACTTCCTTaGCTTCTTCTAATGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HLCCKKAITDMTLCTQPGPVGLP*LLLMLL Trigger: AAGAAGCATTAGAAGAAGCAAAGGAAGTCCGACAGG...GCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCTTCTTACAACAGAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR CAA 90 bp | GACATGACATTGTGCACACAACCAGGCCAGGTGACCTTCACTGAAACTTGCTTTAGTGGTGCACCACCATaGCTATTATTTGTTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DMTLCTQPGQVTFTETCFSGAPP*LLFVSW Trigger: CCAAGAAACAAATAATAGCAATGGTGGTGCACCACT...AAAGCAAGTTTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR CAA 90 bp | CTAGAACCTGGGGTACAGTGGTGCACCACCATTGCTATTATTTGTTTCTTGGTTTGGTCCATACTCATGTaGATGAACAATCGTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LEPGVQWCTTIAIICFLVWSILM*MNNRLP Trigger: AGGGAGACGATTGTTCATCAACATGAGTATGGACCA...AACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCCCAGGTTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR CAA 90 bp | TCAGACTCGTACAACTCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTATCACAGACATGACATaGTGCACACAACCAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SDSYNSMFISAIRAFSSSITDMT*CTQPGQ Trigger: CTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGAT...ACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGTACGAGTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR CAA 90 bp | GTGGATCAAAATCAGAAGACCAAGAGGAACCAGGTTCCAATTTCTTTTCAACTAATCACAGACATGACATaGTGCACACAACCAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VDQNQKTKRNQVPISFQLITDMT*CTQPGQ Trigger: CTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGAT...TAGTTGAAAAGAAATTGGAACCTGGTTCCTCTTGGTCTTCTGATTTTGATCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462523.5 |
||
| CDS-3UTR CAA 90 bp | CATCTCTGTTGTAAGAAGGCAATCACAGACATGACATTGTGCACACAACCAGGCAATCTAGGGTTTGCCTaGGTATCTTGTCCTCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: HLCCKKAITDMTLCTQPGNLGFA*VSCPQI Trigger: AATTTGAGGACAAGATACCAAGGCAAACCCTAGATT...GCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCTTCTTACAACAGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCTTACTGCTCGCCGCAATTCTTCCCATAAAGAAGTAAACTGTGTCAGCAATCTAGGGTTTGCCTaGGTATCTTGTCCTCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: LLLTARRNSSHKEVNCVSNLGFA*VSCPQI Trigger: AATTTGAGGACAAGATACCAAGGCAAACCCTAGATT...GCTGACACAGTTTACTTCTTTATGGGAAGAATTGCGGCGAGCAGTAAGAAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462523.5 |
||
| CDS-3UTR CAA 90 bp | CAGACTCGTACAACTCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTACCAGTTCAGCCTTTGTaGAACCCTTTTCCCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: QTRTTQCLFLLLGLFPAVPVQPL*NPFPST Trigger: GGTAGAGGGAAAAGGGTTCAACAAAGGCTGAACTGG...TACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGTACGAGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS CCA 90 bp | TTGTCACTGGAGCAGTGTGAAACAAGAGATTCAGAAATGGTTATGTaGGTTGGTGGTATGCAAAACAGAACCATATTCAGAAGTGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSLEQCETRDSEMVM*VGGMQNRTIFRSEL Trigger: CAACTCACTTCTGAATATGGTTCTGTTTTGCATACCACCAACCCACATAACCATTTCTGAATCTCTTGTTTCACACTGCTCCAGTGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485042.1 |
||
| CDS-3UTR CAA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTCCTGTCGGACTTCCTTaGCTTCTTCTAATGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SMFISAIRAFSSSSSPLFPVGLP*LLLMLL Trigger: AAGAAGCATTAGAAGAAGCAAAGGAAGTCCGACAGG...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
||
| CDS-3UTR CAA 90 bp | TCAATGTTTATTTCTGCTATTAGGGCTTTTTCCAGCAGTAGTTCCCCACTGTTTAATCCAGTTCAGCCTTaGTTGAACCCTTTTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SMFISAIRAFSSSSSPLFNPVQP*LNPFPS Trigger: AGAGGGAAAAGGGTTCAACAAAGGCTGAACTGGATT...AAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR CAA 90 bp | ACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGAATCCAGTTCAGCCTTaGTTGAACCCTTTTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: TTIAIICFLVKNPVQPLLNPVQP*LNPFPS Trigger: AGAGGGAAAAGGGTTCAACAAAGGCTGAACTGGATT...CAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR CAA 90 bp | ACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGAACAGTGGTGCACCACCATaGCTATTATTTGTTTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: TIAIICFLVKNPVQPLLNSGAPP*LLFVSW Trigger: CCAAGAAACAAATAATAGCAATGGTGGTGCACCACT...GTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS-3UTR CAA 90 bp | ACCACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGACTGTGTCAGCTTCTTaGTGGATCAAAATCAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: TTIAIICFLVKNPVQPLLTVSAS*WIKIRR Trigger: TCTTCTGATTTTGATCCACAAAGAAGCTGACACAGT...CAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| CDS-3UTR CAA 90 bp | ACCATTGCTATTATTTGTTTCTTGGTTAAGAATCCAGTTCAGCCTTTGTTGAACCATAACAGGTCCTGGTaGATGAACAACTTTTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: TIAIICFLVKNPVQPLLNHNRSW*MNNFSN Trigger: ATTGGAAAAGTTGTTCATCAACCAGGACCTGTTATG...GTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS GCA 72 bp | GCAGCCAGCCGGGCCTGGCGCAGCATCAGTGCCCGCTaGCGCTTCCGCTCGATACTCGCCCGCACCGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: AASRAWRSISAR*RFRSILARTEA Trigger: TGCCTCGGTGCGGGCGAGTATCGAGCGGAAGCGGCAGCGGGCACTGATGCTGCGCCAGGCCCGGCTGGCTGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS GCA 72 bp | ATACTCGCCCGCACCGAGGCAGGCAGCTCCGCGGGTTaGTCTAAAGCCGCCGCCTCCGGCAAAGCCCCGTCG | + |
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Preference number: 6 (lower is better) Translates to: ILARTEAGSSAG*SKAAASGKAPS Trigger: CGACGGGGCTTTGCCGGAGGCGGCGGCTTTAGAGCAACCCGCGGAGCTGCCTGCCTCGGTGCGGGCGAGTAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS GCA 72 bp | TACATTAGCCATGCCGAGGCAGGCAGCTCCGCGGGTTaGTCTAAAGCCGCCGCCTCCGGCAAAGCCCCGTCG | + |
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Preference number: 6 (lower is better) Translates to: YISHAEAGSSAG*SKAAASGKAPS Trigger: CGACGGGGCTTTGCCGGAGGCGGCGGCTTTAGAGCAACCCGCGGAGCTGCCTGCCTCGGCATGGCTAATGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496104.1 |
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| CDS GCA 72 bp | AATGAAGCCTCCTCCTGTGTCAATTATCTTTGGGGCTaGTTTTACATTAGCCATGCCGAGGCAGGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NEASSCVNYLWG*FYISHAEAGSS Trigger: GGAGCTGCCTGCCTCGGCATGGCTAATGTAAAAGCAGCCCCAAAGATAATTGACACAGGAGGAGGCTTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496104.1 |
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| CDS GCA 72 bp | AATGAAGCCTCCTCCTGTGTCAATTATCTTTGGGGCTaGTTTTACATTAGCCATGCCTCCAGTAGCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: NEASSCVNYLWG*FYISHASSSRS Trigger: GCTGCGGCTACTGGAGGCATGGCTAATGTAAAAGCAGCCCCAAAGATAATTGACACAGGAGGAGGCTTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000375128.5 ENST00000462523.5 |
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| CDS GCA 72 bp | AACAATCGTCTCCCTTTTCCACACGCTGCTTCTTACTaGTCGCCGCAATTCTCACTAGTTCGGCCTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: NNRLPFPHAASY*SPQFSLVRPVN Trigger: ATTCACAGGCCGAACTAGTGAGAATTGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGGAGACGATTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485042.1 |
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| CDS GCA 72 bp | CATGTTGATGAACAATCGTCTCCCTTTTCCACACGCTaGTTCTTACTGCTCGCCGCAATTCTCACTAGTTCG | + |
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Preference number: 6 (lower is better) Translates to: HVDEQSSPFSTR*FLLLAAILTSS Trigger: CGAACTAGTGAGAATTGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGGAGACGATTGTTCATCAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485042.1 |
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| CDS CCA 72 bp | AATCTCTACAGTGTCTACTCCAGTCTCAGCCCTTTGTaGCCTATTCAGGAAGGCGGGAACAACCTCTTTTAC | + |
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Preference number: 6 (lower is better) Translates to: NLYSVYSSLSPL*PIQEGGNNLFY Trigger: GTAAAAGAGGTTGTTCCCGCCTTCCTGAATAGGCCACAAAGGGCTGAGACTGGAGTAGACACTGTAGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| CDS CAA 72 bp | TCTAATCTCTACAGTGTCTACTCCAGTCTCAGCCCTTaGTGGCCTATTCAGGAAGGCGGGAACAACCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SNLYSVYSSLSP*WPIQEGGNNLF Trigger: AAAGAGGTTGTTCCCGCCTTCCTGAATAGGCCACAAAGGGCTGAGACTGGAGTAGACACTGTAGAGATTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462523.5 |
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| CDS GCA 72 bp | CATGTTGATGAACAATCGTCTCCCTTTTCCACACGCTaGTTCTTACTGCTCGCCGCAATTCTTTTACTTTTT | + |
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Preference number: 6 (lower is better) Translates to: HVDEQSSPFSTR*FLLLAAILLLF Trigger: AAAAAGTAAAAGAATTGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGGAGACGATTGTTCATCAACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375128.5 |
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| CDS CAA 72 bp | CAGTCTTTCAGAAGATATTCTTGTTTTGCCTCTGTTTaGGTTATAAGCTTGTGTTTATCATCAGCATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QSFRRYSCFASV*VISLCLSSASL Trigger: CAGAGATGCTGATGATAAACACAAGCTTATAACCAAAACAGAGGCAAAACAAGAATATCTTCTGAAAGACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375128.5 ENST00000462523.5 ENST00000496104.1 |
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