RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for XDH (Homo sapiens)

Ensembl gene IDs: ENSG00000158125

Ensembl transcript IDs: ENST00000379416.4, ENST00000476043.1, ENST00000491727.5

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATTCTGTGACTTTAATAGATCCATGTTCTGTGGTATGTTCCTCCTaGTCCATGGAAGCCCAAAGGCAGCACAAGAAGACTCTGCTGAGG +
Preference number: 1 (lower is better)
Translates to: HSVTLIDPCSVVCSS*SMEAQRQHKKTLLR
Trigger: CCTCAGCAGAGTCTTCTTGTGCTGCCTTTGGGCTTCCATGGAGCAGGAGGAACATACCACAGAACATGGATCTATTAAAGTCACAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR CCA 90 bp GATAGAGACAGAAGAGACAGAGCTAGGATGAGAACCCAGGCTTCTTaGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCATTT +
Preference number: 1 (lower is better)
Translates to: DRDRRDRARMRTQAS*LFYLWLGLILIAAF
Trigger: AAATGCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTTCTCATCCTAGCTCTGTCTCTTCTGTCTCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR CCA 90 bp ATCAAGCACCAGTCCAACTATATCATTTCCACTATCCTCCCTCCATaGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGATTTATAC +
Preference number: 1 (lower is better)
Translates to: IKHQSNYIISTILPP*PEPQILSGRRLDLY
Trigger: GTATAAATCCAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGAAATGATATAGTTGGACTGGTGCTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR GCA 90 bp TTTCCAATGATTCAAAGATGGTTAGAGGATTTAACCTTACCCCACTaGCTCATTGCAAAATTTGAGTATAGATTCAAGGTTATGCTTTGC +
Preference number: 1 (lower is better)
Translates to: FPMIQRWLEDLTLPH*LIAKFEYRFKVMLC
Trigger: GCAAAGCATAACCTTGAATCTATACTCAAATTTTGCAATGAGGCAGTGGGGTAAGGTTAAATCCTCTAACCATCTTTGAATCATTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR TCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGAGACAGAGCTAGGATaGGAACCCAGGCTTCTTGGC +
Preference number: 2 (lower is better)
Translates to: STILPPWPEPQILSGRRLETELG*EPRLLG
Trigger: GCCAAGAAGCCTGGGTTCTCATCCTAGCTCTGTCTC...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR TCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGTGCTGTTCATTGGTTTaGAGGCCAGGCTTTCACAGG +
Preference number: 2 (lower is better)
Translates to: STILPPWPEPQILSGRRLCCSLV*RPGFHR
Trigger: CCTGTGAAAGCCTGGCCTTCAAACCAATGAACAGCA...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR TCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCGCAGCCTCAACCTCCTaGGCTCAAATGATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSAASTS*AQMISP
Trigger: TGGAGAGATCATTTGAGCTCAGGAGGTTGAGGCTGC...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR TCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGCACAGGAAGGGGAATTaGCAGTCCAAGATCACAAAG +
Preference number: 2 (lower is better)
Translates to: STILPPWPEPQILSGRRLHRKGN*QSKITK
Trigger: CTTTGTGATCTTGGACTGTCAATTCCCCTTCCTGTG...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR GCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCGTGGTATGTTCCTCCTaGTCCATGGAAGCCCAAAGG +
Preference number: 2 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSVVCSS*SMEAQR
Trigger: CCTTTGGGCTTCCATGGAGCAGGAGGAACATACCAC...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGGTTCCTCCTGCTCCATaGAAGCCCAAAGGCAGCACA +
Preference number: 2 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRVPPAP*KPKGST
Trigger: TGTGCTGCCTTTGGGCTTCCATGGAGCAGGAGGAAC...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR TCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGCCTCCTGAGCTCAAATaGTCTCTCCACCTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMPPELK*SLHLSL
Trigger: AAGGCTGAGGTGGAGAGATCATTTGAGCTCAGGAGG...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR CAA 90 bp AGAGGTTTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTaGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACC +
Preference number: 2 (lower is better)
Translates to: RGLWESSSKDRHHQN*RLYRLSSKWGIAQT
Trigger: GGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAAACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR GCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCTTAACCTTACCCCACTaGCTCATTGCAAAATTTGAG +
Preference number: 2 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSLTLPH*LIAKFE
Trigger: CTCAAATTTTGCAATGAGGCAGTGGGGTAAGGTTAA...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR TCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCGACACCATCAGAACTTaGGGTTATACAGGCTGTCCA +
Preference number: 2 (lower is better)
Translates to: LTVSFISDIKHQSNYIISDTIRT*GYTGCP
Trigger: TGGACAGCCTGTATAACCTCAAGTTCTGATGGTGTC...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR TCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCCGCAGAAACTTGAGGTaGTCTCAGCAGAGTTCATTA +
Preference number: 2 (lower is better)
Translates to: LTVSFISDIKHQSNYIISRRNLR*SQQSSL
Trigger: TAATGAACTCTGCTGAGATCACCTCAAGTTTCTGCG...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR CCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCTGCTTTGCTGTTCATTaGTTTGAAGGCCAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: LTVSFISDIKHQSNYIISCFAVH*FEGQAF
Trigger: GAAAGCCTGGCCTTCAAACCAATGAACAGCAAAGCA...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR GCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCTGCAACCCTTATGTTTaGAGTAAAATGGATCACAGG +
Preference number: 2 (lower is better)
Translates to: LTVSFISDIKHQSNYIISCNPYV*SKMDHR
Trigger: CCTGTGATCCATTTTACTGCAAACATAAGGGTTGCA...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR CAA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCTTGCTGTTCATTGGTTaGAAGGCCAGGCTTTCACAG +
Preference number: 3 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSLLFIG*KARLSQ
Trigger: CTGTGAAAGCCTGGCCTTCAAACCAATGAACAGCAA...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR CCA 72 bp CATCAGAACTTGAGGTTATACAGGCTGTCCAGTAAGTaGGGAATAGCACAAACCCTTCCCGACCCTATTCCA +
Preference number: 3 (lower is better)
Translates to: HQNLRLYRLSSK*GIAQTLPDPIP
Trigger: TGGAATAGGGTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAAGTTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR CCA 72 bp CAGTCCAACTATATCATTTCCACTATCCTCCCTCCATaGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: QSNYIISTILPP*PEPQILSGRRL
Trigger: CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGAAATGATATAGTTGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR TCA 72 bp ACAGATTCTCTCTGGCAGAAGGTTGGATTTATACAGTaGAGGCATGTGACAGTGACACATTGTCCACCCAGC +
Preference number: 3 (lower is better)
Translates to: TDSLWQKVGFIQ*RHVTVTHCPPS
Trigger: GCTGGGTGGACAATGTGTCACTGTCACATGCCTTCACTGTATAAATCCAACCTTCTGCCAGAGAGAATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR CAA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCTTCCATTGCATTCACTaGTCTTCCAAATCCCATCTT +
Preference number: 3 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSFHCIH*SSKSHL
Trigger: AAGATGGGATTTGGAAGACAAGTGAATGCAATGGAA...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR CAA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGAGACACCATCAGAACTaGAGGTTATACAGGCTGTCC +
Preference number: 3 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMRHHQN*RLYRLS
Trigger: GGACAGCCTGTATAACCTCAAGTTCTGATGGTGTCT...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR CCA 72 bp TTGAGTATAGATTCAAGGTTATGCTTTGCTGTTCATTaGTTTGAAGGCCAGGCTTTCACAGGAAGGCACACG +
Preference number: 3 (lower is better)
Translates to: LSIDSRLCFAVH*FEGQAFTGRHT
Trigger: CGTGTGCCTTCCTGTGAAAGCCTGGCCTTCAAACCAATGAACAGCAAAGCATAACCTTGAATCTATACTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR TCA 72 bp TATGTTTGCAGTAAAATGGATCACAGGAAGGGGAATTaGCAGTCCAAGATCACAAAGATAGAGACAGAAGAG +
Preference number: 3 (lower is better)
Translates to: YVCSKMDHRKGN*QSKITKIETEE
Trigger: CTCTTCTGTCTCTATCTTTGTGATCTTGGACTGTCAATTCCCCTTCCTGTGATCCATTTTACTGCAAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR TCA 72 bp AGGTCATATATTTATAGGCTTTTAAAGCAGAAGACGTaGGACAACCCTTTACTGCAACCCTTATGTTTGCAG +
Preference number: 3 (lower is better)
Translates to: RSYIYRLLKQKT*DNPLLQPLCLQ
Trigger: CTGCAAACATAAGGGTTGCAGTAAAGGGTTGTCTCACGTCTTCTGCTTTAAAAGCCTATAAATATATGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR-3UTR CAA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCTACCCCACTGCCTCATaGCAAAATTTGAGTATAGAT +
Preference number: 3 (lower is better)
Translates to: LTVSFISDIKHQSNYIISYPTAS*QNLSID
Trigger: ATCTATACTCAAATTTTGCAATGAGGCAGTGGGGTA...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR GCA 72 bp ATTCAAAGATGGTTAGAGGATTTAACCTTACCCCACTaGCTCATTGCAAAATTTGAGTATAGATTCAAGGTT +
Preference number: 3 (lower is better)
Translates to: IQRWLEDLTLPH*LIAKFEYRFKV
Trigger: AACCTTGAATCTATACTCAAATTTTGCAATGAGGCAGTGGGGTAAGGTTAAATCCTCTAACCATCTTTGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGCATCACGGTCCAGCATaGATCGCACAGGGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLHHGPA*IAQGGR
Trigger: CCGGCCGCCCTGTGCGATGCATGCTGGACCGTGATG...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGGTCCAGCAGCTCCTTaGGGGTTGAGGCCTGTATCC +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLGPAAP*GLRPVS
Trigger: GGATACAGGCCTCAACCCTCAAGGAGCTGCTGGACC...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGCAAACCAGCGCAGCTaGTCCAGGACCCCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLANQRS*SRTPLN
Trigger: GTTCAGAGGGGTCCTGGAGCAGCTGCGCTGGTTTGC...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGCCTGCACACACGTCCTaGAGCAGCTCCTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLPAHTS*SSSSFQ
Trigger: CTGGAAGGAGGAGCTGCTGCAGGACGTGTGTGCAGG...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGCTCCTCTGCCAGTCCTaGACACACGTCCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLLLCQS*THVLQQ
Trigger: CTGCTGCAGGACGTGTGTGCAGGACTGGCAGAGGAG...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGCATCGGGAGGCAGATaGAGCTCCTCTGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLASGGR*SSSASP
Trigger: AGGACTGGCAGAGGAGCTGCATCTGCCTCCCGATGC...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCGCCTCACCAGAGGCCTaGATGTCCGCTGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSASPEA*MSAARW
Trigger: CCACCTGGCAGCGGACATGCAGGCCTCTGGTGAGGC...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGCAGCTCCTTGAGGGTTaGGGCCTGTATCCACGTCAC +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLQLLEG*GLYPRH
Trigger: GTGACGTGGATACAGGCCTCAACCCTCAAGGAGCTG...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCGCGGCCGGTCTTATATaGAGCCAGGGCCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSAAGLI*SQGHCR
Trigger: ACGGCAGTGGCCCTGGCTGCATATAAGACCGGCCGC...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCGGATCTTCTCCGGGGTaGCAGGGCTGTCTAGCCGGA +
Preference number: 4 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSGSSPG*QGCLAG
Trigger: TCCGGCTAGACAGCCCTGCCACCCCGGAGAAGATCC...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACATGGTGGGCTCGGGCTaGTTCCGGAGCAGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDMVGSG*FRSSVY
Trigger: GTACACACTGCTCCGGAATCAGCCCGAGCCCACCAT...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGGCCTGCTTGAATGCTaGGAAATACTCCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLGLLEC*EILPLP
Trigger: AGGGAGGGGGAGTATTTCTCAGCATTCAAGCAGGCC...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTGGGCCCGGGTGCTGGTaGCCAGCCGGAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTGPGCW*PAGETA
Trigger: AGCTGTCTCTCCGGCTGGTCACCAGCACCCGGGCCC...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACGGAGCAGGGACACCCTaGACTCAATGGGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDGAGTP*TQWGCC
Trigger: GCAGCATCCCCATTGAGTTCAGGGTGTCCCTGCTCC...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACAGGGAAGGTTGGTTTTaGACAGCCGCCCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDREGWF*TAAQCP
Trigger: GGGGCACTGGGCGGCTGTGCAAAACCAACCTTCCCT...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGCCAGGGCCACTGCCGTaGACACCACAGTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRPGPLP*TPQCSG
Trigger: CCCGGAGCACTGTGGTGTCCACGGCAGTGGCCCTGG...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACATGTCCTCCTCAGACTaGCCCTTGGGCACCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDMSSSD*PLGTSW
Trigger: CCAAGAGGTGCCCAAGGGTCAGTCTGAGGAGGACAT...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGTTATTACCTGTGTGCTaGGCTCGAGCTGCACGGATG +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLLLPVC*ARAARM
Trigger: CATCCGTGCAGCTCGAGCTCAGCACACAGGTAATAA...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACGAGCTCCATCTCCCCTaGCTCGCCTTTTGGAACAGC +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDELHLP*LAFWNS
Trigger: GCTGTTCCAAAAGGCGAGGCAGGGGAGATGGAGCTC...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTCTAGGGCCACGGGTGTaGAGGCTCCCCTCGGGGGAA +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTLGPRV*RLPSGE
Trigger: TTCCCCCGAGGGGAGCCTGCACACCCGTGGCCCTAG...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGCAATCATAGCTCACTaGAGCCTCAACCTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLAIIAH*SLNLLS
Trigger: GCTCAGGAGGTTGAGGCTGCAGTGAGCTATGATTGC...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACAATGGGCTCCTGGGTTaGATCCAGGGGCGTGAACTC +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDNGLLG*IQGREL
Trigger: GAGTTCACGCCCCTGGATCCAACCCAGGAGCCCATT...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACAAGAGGCCAAGGCCCTaGACAAATGCCCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDKRPRP*TNAPST
Trigger: GGTGGAAGGGGCATTTGTCCAGGGCCTTGGCCTCTT...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGAAGATGGCGAGAGGCTaGCTGAGTGGTCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLKMARG*LSGLSS
Trigger: AGAAGAAAGACCACTCAGTCAGCCTCTCGCCATCTT...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGTTGGCGTCAGGGTGCTaGGCCTTGAGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMLASGC*ALRSSS
Trigger: GCTGCTGGACCTCAAGGCTCAGCACCCTGACGCCAA...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCTCCGGGAGGCCTGCTTaGATGCTGAGAAATACTCCC +
Preference number: 4 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSSGRPA*MLRNTP
Trigger: GGGAGTATTTCTCAGCATTCAAGCAGGCCTCCCGGA...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCGCCACAGACTTGACTTaGTTCCCAGCAAACCAGCGC +
Preference number: 4 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSATDLT*FPANQR
Trigger: GCGCTGGTTTGCTGGGAAGCAAGTCAAGTCTGTGGC...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGACCGGAAGTCCACCATaGCACCAGGGGCATCGGGAG +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRTGSPP*HQGHRE
Trigger: CTCCCGATGCCCCTGGTGGCATGGTGGACTTCCGGT...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCGGCCTGCATGTCCGCTaGCAGGTGGGGCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISGLHVR*QVGQGP
Trigger: CGGCCCCTGCCCCACCTGGCAGCGGACATGCAGGCC...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGTGCAGCCAGGGCCACTaGCGTGGACACCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMCSQGH*RGHHSA
Trigger: AGCACTGTGGTGTCCACGGCAGTGGCCCTGGCTGCA...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCTCGCTCAGGCAGGAGTaGAGTGGCGCAATCATAGCT +
Preference number: 4 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSSLRQE*SGAIIA
Trigger: AGCTATGATTGCGCCACTGCACTCCTGCCTGAGCGA...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGATGCAGCCTCGTCTTaGTGCTTCCTATTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLDAASS*CFLFLP
Trigger: TGGAAGGAATAGGAAGCACCAAGACGAGGCTGCATC...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGTCCCCACGACCAGCTTaGCGTCAGGGTGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRSPRPA*RQGAEP
Trigger: AGGCTCAGCACCCTGACGCCAAGCTGGTCGTGGGGA...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGGACTTGATCTTGGCGTaGGCCCGGGTGCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRDLILA*ARVLVT
Trigger: GGTCACCAGCACCCGGGCCCACGCCAAGATCAAGTC...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACCCCTGCCTCGCCTTTTaGAACAGCAATGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDPCLAF*NSNGAV
Trigger: CACTGCACCATTGCTGTTCCAAAAGGCGAGGCAGGG...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACTGTTCCCCACATTGCTaGAGTGGTCCACCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDCSPHC*SGPPQE
Trigger: CTCTTGAGGTGGACCACTTCAGCAATGTGGGGAACA...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACGCAGCCTCGTCTTGGTaGTTCCTATTCCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDAASSW*FLFLPQ
Trigger: CTGTGGAAGGAATAGGAAGCACCAAGACGAGGCTGC...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGTGCTCCGGGTCTCCTTaGCTCCAAAGCCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMCSGSP*LQSLLP
Trigger: TGGGAGGAGGCTTTGGAGGCAAGGAGACCCGGAGCA...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACGTGGTATGTTCCTCCTaGTCCATGGAAGCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDVVCSS*SMEAQR
Trigger: CCTTTGGGCTTCCATGGAGCAGGAGGAACATACCAC...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAAGGTGCAAGGAGCAGATaGGGGCCAGGCAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQGARSR*GPGRHW
Trigger: CCAATGCCTGCCTGGCCCCCATCTGCTCCTTGCACC...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGGGAAGCCCTGGAGGATaGGTCTGTAGCCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRGSPGG*VCSLCS
Trigger: GCTGCACAGGCTACAGACCCATCCTCCAGGGCTTCC...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACTTCTCCTGGTGCCTCTaGACACAAGTGTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDFSWCL*TQVSAW
Trigger: CCAAGCTGACACTTGTGTCCAGAGGCACCAGGAGAA...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACCCCACATTGCTGAAGTaGTCCACCTCAAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDPTLLK*STSRAT
Trigger: TGTGGCTCTTGAGGTGGACCACTTCAGCAATGTGGG...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGCAGTGCCCCGGATGTTaGGGATTTTATAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLQCPGC*GFYSSC
Trigger: ACAACTGCTATAAAATCCCCAACATCCGGGGCACTG...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCTCCAGCACTCGGCAATaGGCATCCCCTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISSSTRQ*ASPGAP
Trigger: GGGGGCCCCAGGGGATGCTCATTGCCGAGTGCTGGA...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAACCATGTAGGCAGCTGTaGCCCAGTCTTCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQPCRQL*PSLPRS
Trigger: GCTCCTGGGAAGACTGGGTCACAGCTGCCTACATGG...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGGTCACTGCAACATGGTaGAAGGAGCAGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRVTATW*KEQMGA
Trigger: GGCCCCCATCTGCTCCTTGCACCATGTTGCAGTGAC...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACCCTTCAAATCGCAGCTaGTTCCGAGGAGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDPSNRS*FRGVSF
Trigger: GAAAGACACTCCTCGGAAGCAGCTGCGATTTGAAGG...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGCAGATGCAGCTCCTCTaGCAGTCCTGCACACACGTC +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMQMQLL*QSCTHV
Trigger: GACGTGTGTGCAGGACTGGCAGAGGAGCTGCATCTG...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTTGCACAGCCGCCCAGTaGCCCGGATGTTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTCTAAQ*PGCWGF
Trigger: AAATCCCCAACATCCGGGGCACTGGGCGGCTGTGCA...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAATGTCCACGCAGGCATTaGGGATCTTCTCCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQCPRRH*GSSPGW
Trigger: CCACCCCGGAGAAGATCCGCAATGCCTGCGTGGACA...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAAGTGCAGAACCCGCACTaGGAGCCGTGGCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQVQNPH*EPWLLA
Trigger: TGCCAAAAGCCACGGCTCCCAGTGCGGGTTCTGCAC...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGAGCATCCACCATCCCTaGCAAAGGTCCGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRSIHHP*QRSGSP
Trigger: AGGGCTTCCGGACCTTTGCCAGGGATGGTGGATGCT...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGGGAAAAATGGGCTCCTaGGTTGGATCCAGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMGKMGS*VGSRGV
Trigger: CACGCCCCTGGATCCAACCCAGGAGCCCATTTTTCC...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTAGATGGCCTTCTTGTTaGGGCAGTCGCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTRWPSC*GSRGAG
Trigger: CCCTGCTCCGCGACTGCCCCAACAAGAAGGCCATCT...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGCTTCTAGAGGTTTGTaGGAATCCTCTTCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLASRGL*ESSSKD
Trigger: GTCCTTTGAAGAGGATTCCCACAAACCTCTAGAAGC...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAACGGACGCCACAGACTTaGCTTGCTTCCCAGCAAACC +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQRTPQT*LASQQT
Trigger: GGTTTGCTGGGAAGCAAGTCAAGTCTGTGGCGTCCG...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGCATCATCAGCGGAAATaGAACAAACAAACCCTGGAA +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLHHQRK*NKQTLE
Trigger: TTCCAGGGTTTGTTTGTTTCATTTCCGCTGATGATG...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACGTAGTTCTTCATAGGTaGTTTTCACCCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDVVLHR*FSPLGQ
Trigger: CTGCCCAAGGGGTGAAAATCACCTATGAAGAACTAC...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGGAGACAGAGCTAGGATaGGAACCCAGGCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMETELG*EPRLLG
Trigger: GCCAAGAAGCCTGGGTTCTCATCCTAGCTCTGTCTC...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGAACCCCCAACATTTTTaGAACAAAGCTCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: STILPPWPEPQILSGRRLNPQHF*NKALGL
Trigger: AAGACCCAGAGCTTTGTTGCAAAAATGTTGGGGGTT...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGGGGGATGCTGCCAAATaGCGGGATCTTGTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMGDAAK*RDLVGA
Trigger: AGCACCTACAAGATCCCGGCATTTGGCAGCATCCCC...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAACCGCACTGGGAGCCGTaGCTTTTGGCAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQPHWEP*LLAILS
Trigger: GGAGAGAATTGCCAAAAGCCACGGCTCCCAGTGCGG...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTCAATCTCCTCCATGGTaGGCTCGGGCTGATTCCGGA +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTQSPPW*ARADSG
Trigger: TCCGGAATCAGCCCGAGCCCACCATGGAGGAGATTG...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGTCTCAATCTCCTCCATaGTGGGCTCGGGCTGATTCC +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRSQSPP*WARADS
Trigger: GGAATCAGCCCGAGCCCACCATGGAGGAGATTGAGA...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACCCAGCCTTTTCAAGATaGTCTGACAAGCCGCATAGA +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDPAFSR*SDKPHR
Trigger: TCTATGCGGCTTGTCAGACCATCTTGAAAAGGCTGG...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCAGGCTGTCCAGTAAGTaGGGAATAGCACAAACCCTT +
Preference number: 4 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSRLSSK*GIAQTL
Trigger: AAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCT...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGTGGCGAGAGGCTGACTaGGTGGTCTTTCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRWREAD*VVFLLV
Trigger: AACCAGAAGAAAGACCACTCAGTCAGCCTCTCGCCA...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGAGTGGTCTTGAGGGCTaGGATGGTTCTGTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMSGLEG*DGSVGH
Trigger: ATGGCCAACAGAACCATCTCAGCCCTCAAGACCACT...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTGCCTCTGAGTGGTCTTaGGGGCTGAGATGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTASEWS*GLRWFC
Trigger: ACAGAACCATCTCAGCCCTCAAGACCACTCAGAGGC...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTTTGGAAAGCTGCCTCTaGGTGGTCTTGAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTLESCL*VVLRAE
Trigger: CTCAGCCCTCAAGACCACTCAGAGGCAGCTTTCCAA...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTATGTATCTATGGACTTaGTCTTGGCGTGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTMYLWT*SWRGPG
Trigger: CCCGGGCCCACGCCAAGATCAAGTCCATAGATACAT...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGAGCATCTGGGCAAGGTaGAACCCTCAAGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRSIWAR*NPQASG
Trigger: ACCAGAAGCTTGAGGGTTTCACCTTGCCCAGATGCT...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGGTGCGGAGGTTCTTATaGTCTCCTGTTAGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMVRRFL*SPVRQS
Trigger: CGACTGCCTAACAGGAGATCATAAGAACCTCCGCAC...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACTGGACGATCTTGTTCTaGAGACGATCATACTTGGAG +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDWTILF*RRSYLE
Trigger: CTCCAAGTATGATCGTCTGCAGAACAAGATCGTCCA...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTCTCTCCTGCACAGGATaGAGCCTCGTCTTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTLSCTG*SLVLVL
Trigger: AAGCACCAAGACGAGGCTGCATCCTGTGCAGGAGAG...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGTGGGTCTGTAGCCTGTaGAGCGGCACAGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRWVCSL*SGTDFL
Trigger: AAGGAAATCTGTGCCGCTGCACAGGCTACAGACCCA...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGAATACTCCCCCTCCCTaGTGTAGGGGATCTCTATGG +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMNTPPP*CRGSLW
Trigger: CCATAGAGATCCCCTACAGCAGGGAGGGGGAGTATT...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGAAGGCCCTGGACAAATaGCCCTTCCACCTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMKALDK*PFHLSN
Trigger: ATTGGACAGGTGGAAGGGGCATTTGTCCAGGGCCTT...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGGTGCTGAGCTCGAGCTaGACGGATGGCATCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRVLSSS*TDGIFD
Trigger: ATCAAAGATGCCATCCGTGCAGCTCGAGCTCAGCAC...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAAGGGCCAGGCAGGCATTaGCAGAAAAGTGGACGATCT +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQGPGRH*QKSGRS
Trigger: AGATCGTCCACTTTTCTGCCAATGCCTGCCTGGCCC...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTCAGCCTCAGCAACTCTaGGGGAAAAATGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTQPQQL*GKNGLL
Trigger: CAGGAGCCCATTTTTCCCCCAGAGTTGCTGAGGCTG...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAACCTCCTTCCAGAGCTTaGAAAGCTGCCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQPPSRA*KAASEW
Trigger: CCACTCAGAGGCAGCTTTCCAAGCTCTGGAAGGAGG...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGAGCCAACCTTGTATCTaGCCAGGAAGGGATGTCTGC +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRSQPCI*PGRDVC
Trigger: GCAGACATCCCTTCCTGGCCAGATACAAGGTTGGCT...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAAGTTCCTCCTGCTCCATaGAAGCCCAAAGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQVPPAP*KPKGST
Trigger: TGTGCTGCCTTTGGGCTTCCATGGAGCAGGAGGAAC...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTCCTCAAGCTTCTGGTTaGAGTGTGTCAGGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTPQASG*SVSGPL
Trigger: AAGGGGACCTGACACACTTCAACCAGAAGCTTGAGG...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCGTAGCTCCTCTAGGGTaGAGAGGCCAAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISVAPLG*RGQGPG
Trigger: TCCAGGGCCTTGGCCTCTTCACCCTAGAGGAGCTAC...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGTGCTGTTCATTGGTTTaGAGGCCAGGCTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMCCSLV*RPGFHR
Trigger: CCTGTGAAAGCCTGGCCTTCAAACCAATGAACAGCA...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAACCTCCTGAGCTCAAATaGTCTCTCCACCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQPPELK*SLHLSL
Trigger: AAGGCTGAGGTGGAGAGATCATTTGAGCTCAGGAGG...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAAGCAGCCTCAACCTCCTaGGCTCAAATGATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQAASTS*AQMISP
Trigger: TGGAGAGATCATTTGAGCTCAGGAGGTTGAGGCTGC...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCGTTGGATTTATACAGTaGAGGCATGTGACAGTGACA +
Preference number: 4 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSVGFIQ*RHVTVT
Trigger: TGTCACTGTCACATGCCTTCACTGTATAAATCCAAC...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTGTTGTCACTGCAACATaGTGCAAGGAGCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTVVTAT*CKEQMG
Trigger: CCCCATCTGCTCCTTGCACCATGTTGCAGTGACAAC...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACGTTCATGCAGCAATTTaGATTATTCCCATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDVHAAI*IIPISS
Trigger: GGAGGAGATGGGAATAATCCAAATTGCTGCATGAAC...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGCTCAGGGATCCAGGCTaGGCAGACAATCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRLRDPG*ADNHRK
Trigger: TTTCCTATGATTGTCTGCCCAGCCTGGATCCCTGAG...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTCCAGGGAAGAAGGTGTaGTCCATCTGGACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTPGKKV*SIWTVL
Trigger: GAGAACTGTCCAGATGGACCACACCTTCTTCCCTGG...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGCTTCCCAGGAGCCACTaGGATTCTTCTTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRLPRSH*DSSSCR
Trigger: CCTACAAGAAGAAGAATCCCAGTGGCTCCTGGGAAG...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACTCTCTGGCAGAAGGTTaGATTTATACAGTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDSLAEG*IYTVKA
Trigger: TGCCTTCACTGTATAAATCCAACCTTCTGCCAGAGA...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAACTGTCCCAGTCTTCATaGAGCCAACCTTGTATCTGG +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQLSQSS*SQPCIW
Trigger: CCAGATACAAGGTTGGCTTCATGAAGACTGGGACAG...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGCGTTCCATAATACTCTaGGAGAGATCCTGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMRSIIL*ERSWVF
Trigger: GAACACCCAGGATCTCTCTCAGAGTATTATGGAACG...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGAGTAGGGCTCCTGCCTaGTTCAGAAAAGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMSRAPA*FRKGTV
Trigger: TACAGTTCCTTTTCTGAATCAGGCAGGAGCCCTACT...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAAGTGGAAGGGGTTCCCTaGGTTAGTCTCAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQVEGVP*VSLKAV
Trigger: TACAGCTTTGAGACTAACTCAGGGAACCCCTTCCAC...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTTGGAGCCAACATCCATaGCAATATCTGTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTWSQHP*QYLCGG
Trigger: ACCTCCGCACAGATATTGTCATGGATGTTGGCTCCA...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGCACAGGAAGGGGAATTaGCAGTCCAAGATCACAAAG +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMHRKGN*QSKITK
Trigger: CTTTGTGATCTTGGACTGTCAATTCCCCTTCCTGTG...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGTTCCACAGTTGTCACTaGAACATGGTGCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMFHSCH*NMVQGA
Trigger: TGCTCCTTGCACCATGTTGCAGTGACAACTGTGGAA...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAATCTCTCCGGGAGGCCTaGTTGAATGCTGAGAAATAC +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQSLREA*LNAEKY
Trigger: GTATTTCTCAGCATTCAAGCAGGCCTCCCGGAGAGA...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCACAGCACCAATGATATaGCCAACACAAGTAACCTTA +
Preference number: 4 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSTAPMI*PTQVTL
Trigger: TAAGGTTACTTGTGTTGGGCATATCATTGGTGCTGT...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGTTGGAACAGCAATGGTaGAGTGAGTCTCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRLEQQW*SESPGR
Trigger: TCTACCTGGAGACTCACTGCACCATTGCTGTTCCAA...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAACCAGGAAGGGATGTCTaGCACCAGTTATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQPGRDV*HQLSAC
Trigger: ACATGCTGATAACTGGTGGCAGACATCCCTTCCTGG...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCTGCAACCCTTATGTTTaGAGTAAAATGGATCACAGG +
Preference number: 4 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSCNPYV*SKMDHR
Trigger: CCTGTGATCCATTTTACTGCAAACATAAGGGTTGCA...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGGCAGACGATCATACTTaGAGAGCATCACTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRADDHT*RASLCK
Trigger: CTTGCACAGTGATGCTCTCCAAGTATGATCGTCTGC...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTTGTAGGGGATCTCTATaGAGAGCAGTATCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTCRGSL*RAVSPP
Trigger: CGGAGGAGATACTGCTCTCCATAGAGATCCCCTACA...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTTTGCACTGGCGAAAGTaGGGTCCAGTTTACCACACT +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTLHWRK*GPVYHT
Trigger: AGTGTGGTAAACTGGACCCCACTTTCGCCAGTGCAA...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGACAGTAAAGTTGCACTaGCGAAAGTGGGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRTVKLH*RKWGPV
Trigger: AACTGGACCCCACTTTCGCCAGTGCAACTTTACTGT...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCCCCTTGGGCACCTCTTaGAAGAGCTGGACATCGGCT +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISPLGTS*KSWTSA
Trigger: AGCCGATGTCCAGCTCTTCCAAGAGGTGCCCAAGGG...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGAAACCCTCAAGCTTCTaGTTGAAGTGTGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMKPSSF*LKCVRS
Trigger: GGACCTGACACACTTCAACCAGAAGCTTGAGGGTTT...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGTTTTCAGAGCTCTACTaGCCACCTGGACCATTTTGG +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRFSELY*PPGPFW
Trigger: CCAAAATGGTCCAGGTGGCCAGTAGAGCTCTGAAAA...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAACCTTCGATGCATAGATaGCCTTCTTGTTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQPSMHR*PSCWGS
Trigger: ACTGCCCCAACAAGAAGGCCATCTATGCATCGAAGG...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTAGAACCCAGGCTTCTTaGCTCTTCTACCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTRTQAS*LFYLWL
Trigger: CAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTTCT...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR CAA 72 bp TGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTaGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATA +
Preference number: 4 (lower is better)
Translates to: WESSSKDRHHQN*RLYRLSSKWGI
Trigger: TATTCCCCACTTACTGGACAGCCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTCTGTGGTTCCTGGCTTaGATAAAACTCTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTLWFLA*IKLSCH
Trigger: GTGGCATGAGAGTTTTATTCAAGCCAGGAACCACAG...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCAAGCCACCCCATAGCTaGAGTAGTGGAAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISKPPHS*SSGRGS
Trigger: GGAACCCCTTCCACTACTTCAGCTATGGGGTGGCTT...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGGGTTGTCTCTGGATCTaGATTTTTCTCCACCACCTT +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMGCLWI*IFLHHL
Trigger: AAGGTGGTGGAGAAAAATGCAGATCCAGAGACAACC...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCGTCATTGTCACAGGTTaGGGTCCCCGAACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISVIVTG*GPRTPG
Trigger: ACCTGGAGTTCGGGGACCCCAACCTGTGACAATGAC...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCGGGAGCCGTGGCTTTTaGCAATTCTCTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISGSRGF*QFSPAQ
Trigger: CTGTGCAGGAGAGAATTGCCAAAAGCCACGGCTCCC...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTCACAATCCGGTTTGCTaGAACCCCCAACATTTTTGC +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTHNPVC*NPQHFC
Trigger: GCAAAAATGTTGGGGGTTCCAGCAAACCGGATTGTG...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCGTGTGTACATACTCATaGCGATGCCAGGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISVCTYS*RCQGCR
Trigger: TCTGCACCCCTGGCATCGTCATGAGTATGTACACAC...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGGATGTATATCTCCCCTaGCACAACATTATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRDVYLP*HNIICF
Trigger: GAAGCAGATAATGTTGTGTCAGGGGAGATATACATC...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGTCTCCACCACCTTTCTaGCATTCACAAAGAAAACCA +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRSPPPF*HSQRKP
Trigger: TGGTTTTCTTTGTGAATGGCAGAAAGGTGGTGGAGA...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTTCCAACAGCCTTCGATaGATAGATGGCCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTSNSLR*IDGLLV
Trigger: AACAAGAAGGCCATCTATGCATCGAAGGCTGTTGGA...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAAACTCCTAAGAGACACTaGCAGGTAGTTATCACTGCT +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQTPKRH*QVVITA
Trigger: AGCAGTGATAACTACCTGCCAGTGTCTCTTAGGAGT...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGCAAAAGGGTTGTCTCTaGATCTGCATTTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRQKGCL*ICIFLH
Trigger: GTGGAGAAAAATGCAGATCCAGAGACAACCCTTTTG...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGGAGTGGTCTTTCTTCTaGTTCATGCAGCAATTTGGA +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYREWSFF*FMQQFG
Trigger: TCCAAATTGCTGCATGAACCAGAAGAAAGACCACTC...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCTCTGGACAGTTCTCCTaGTGCCTCTGGACACAAGTG +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISSGQFS*CLWTQV
Trigger: CACTTGTGTCCAGAGGCACCAGGAGAACTGTCCAGA...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGTTTGCAACAAAGCTCTaGGTCTTCATGGTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRFATKL*VFMVFC
Trigger: ACAGAACACCATGAAGACCCAGAGCTTTGTTGCAAA...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCCCACCTGGACCATTTTaGTATGAAGGCCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISPPGPF*YEGLGP
Trigger: TGGGCCAAGGCCTTCATACCAAAATGGTCCAGGTGG...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCTGGACCATTTTGGTATaGAGGCCTTGGCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISWTILV*RPWPIS
Trigger: TGAGATGGGCCAAGGCCTTCATACCAAAATGGTCCA...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCCATCCCACAGGTCACTaGAACTTCACTCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISHPTGH*NFTHPA
Trigger: TGCTGGATGAGTGAAGTTGCAGTGACCTGTGGGATG...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGACTTGGTGGGAATTATaGACAATCCTCTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMTWWEL*TILSFS
Trigger: GGAAAAAGAGAGGATTGTGCATAATTCCCACCAAGT...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCACTCAATGGGGATGCTaGCAAATGCCGGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISTQWGC*QMPGSC
Trigger: ACAAGATCCCGGCATTTGGCAGCATCCCCATTGAGT...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAATGGCTCTTCTACCTCTaGTTGGGCTTGATTTTGATA +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQWLFYL*LGLILI
Trigger: TATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCA...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGAACCTTCTTAGCTTCTaGTGTATCTATGGACTTGAT +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRNLLSF*CIYGLD
Trigger: ATCAAGTCCATAGATACATCAGAAGCTAAGAAGGTT...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTTTAACCTTACCCCACTaGCTCATTGCAAAATTTGAG +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTLTLPH*LIAKFE
Trigger: CTCAAATTTTGCAATGAGGCAGTGGGGTAAGGTTAA...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCCGGCACAGATTTCCTTaGAAGGCATTCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISRHRFP*KAFSIS
Trigger: GGAGATTGAGAATGCCTTCCAAGGAAATCTGTGCCG...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGAGCTTATTCCAAACTTaGTGGGAATTATGCACAATC +
Preference number: 4 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMSLFQT*WELCTI
Trigger: GATTGTGCATAATTCCCACCAAGTTTGGAATAAGCT...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAAACCACAGATTCTCTCTaGCAGAAGGTTGGATTTATA +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQTTDSL*QKVGFI
Trigger: TATAAATCCAACCTTCTGCCAGAGAGAATCTGTGGT...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAAGAAACAGCATATTCTTaGACTTCATCTCAATGCCAA +
Preference number: 4 (lower is better)
Translates to: HHARTDSIISRWKLLWLQETAYS*TSSQCQ
Trigger: TTGGCATTGAGATGAAGTTCAAGAATATGCTGTTTC...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTCTTTCTTCTGGTTCATaGAGCAATTTGGATTATTCC +
Preference number: 4 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTLSSGS*SNLDYS
Trigger: GGAATAATCCAAATTGCTGCATGAACCAGAAGAAAG...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCAACCACAATCCGGTTTaGTGGAACCCCCAACATTTT +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISNHNPV*WNPQHF
Trigger: AAAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTT...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGCTAGAACATTGTACGTaGTCAATAATTGAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRLEHCT*SIIELV
Trigger: AACCAACTCAATTATTGAGCACGTACAATGTTCTAG...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCAGCTGTAGCCCAGATTaGGTGTTCTATAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISSCSPD*VFYKTQ
Trigger: CTGGGTTTTATAGAACACCCAATCTGGGCTACAGCT...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR TCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCAACAATTCTCCTTGTTaGACTTGTCAACCTCACTCT +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISNNSPC*TCQPHS
Trigger: AGAGTGAGGTTGACAAGTTCAACAAGGAGAATTGTT...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR GCA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCGAAAACCAATTTGTCTaGTGTCATTGTCACAGGTTG +
Preference number: 4 (lower is better)
Translates to: LTVSFISDIKHQSNYIISENQFV*CHCHRL
Trigger: CAACCTGTGACAATGACAGCAGACAAATTGGTTTTC...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
3UTR CAA 72 bp ATTACATTTTTGATCAAAATCTTCCATTGCATTCACTaGTCTTCCAAATCCCATCTTGACAAATCACAGGTC +
Preference number: 4 (lower is better)
Translates to: ITFLIKIFHCIH*SSKSHLDKSQV
Trigger: GACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTGAATGCAATGGAAGATTTTGATCAAAAATGTAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 90 bp GTGCACCGGAAGTCCACCATGCCACCAGGGGCATCGGGAGGCAGATaGAGCTCCTCTGCCAGTCCTGCACACACGTCCTGCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VHRKSTMPPGASGGR*SSSASPAHTSCSSS
Trigger: GGAGCTGCTGCAGGACGTGTGTGCAGGACTGGCAGAGGAGCTGCATCTGCCTCCCGATGCCCCTGGTGGCATGGTGGACTTCCGGTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 90 bp AATGTCGTCACAGTACACGGCCTCACCAGAGGCCTGCATGTCCGCTaGCAGGTGGGGCAGGGGCCGGCCCACCATGTCCTCCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: NVVTVHGLTRGLHVR*QVGQGPAHHVLLRL
Trigger: CAGTCTGAGGAGGACATGGTGGGCCGGCCCCTGCCCCACCTGGCAGCGGACATGCAGGCCTCTGGTGAGGCCGTGTACTGTGACGACATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 90 bp GTCGCGGAGCAGGGACACCCTGAACTCAATGGGGATGCTGCCAAATaGCGGGATCTTGTAGGTGCTAGGGCCACGGGTGTGCAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: VAEQGHPELNGDAAK*RDLVGARATGVQAP
Trigger: GGGAGCCTGCACACCCGTGGCCCTAGCACCTACAAGATCCCGGCATTTGGCAGCATCCCCATTGAGTTCAGGGTGTCCCTGCTCCGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 90 bp GGCGTCAGGGTGCTGAGCCTTGAGGTCCAGCAGCTCCTTGAGGGTTaGGGCCTGTATCCACGTCACACGCTCCCCTTCAAATCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GVRVLSLEVQQLLEG*GLYPRHTLPFKSQL
Trigger: CAGCTGCGATTTGAAGGGGAGCGTGTGACGTGGATACAGGCCTCAACCCTCAAGGAGCTGCTGGACCTCAAGGCTCAGCACCCTGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379416.4
ENST00000491727.5
CDS GCA 90 bp GATGTCTGCCACCAGTTATCAGCATGTCCTCATCACGGTCCAGCATaGATCGCACAGGGCGGCCGGTCTTATATGCAGCCAGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: DVCHQLSACPHHGPA*IAQGGRSYMQPGPL
Trigger: CAGTGGCCCTGGCTGCATATAAGACCGGCCGCCCTGTGCGATGCATGCTGGACCGTGATGAGGACATGCTGATAACTGGTGGCAGACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 90 bp CACAGCATCCACCATCCCTGGCAAAGGTCCGGAAGCCCTGGAGGATaGGTCTGTAGCCTGTGCAGCGGCACAGATTTCCTTGGAAGGCAT +
Preference number: 5 (lower is better)
Translates to: HSIHHPWQRSGSPGG*VCSLCSGTDFLGRH
Trigger: ATGCCTTCCAAGGAAATCTGTGCCGCTGCACAGGCTACAGACCCATCCTCCAGGGCTTCCGGACCTTTGCCAGGGATGGTGGATGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 90 bp CATAGATGGCCTTCTTGTTGGGGCAGTCGCGGAGCAGGGACACCCTaGACTCAATGGGGATGCTGCCAAATGCCGGGATCTTGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: HRWPSCWGSRGAGTP*TQWGCCQMPGSCRC
Trigger: GCACCTACAAGATCCCGGCATTTGGCAGCATCCCCATTGAGTTCAGGGTGTCCCTGCTCCGCGACTGCCCCAACAAGAAGGCCATCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGGGGCCAGGCAGGCATaGGCAGAAAAGTGGACGATC +
Preference number: 5 (lower is better)
Translates to: STILPPWPEPQILSGRRLGARQA*AEKWTI
Trigger: GATCGTCCACTTTTCTGCCAATGCCTGCCTGGCCCC...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 90 bp CTCCTTCCAGAGCTTGGAAAGCTGCCTCTGAGTGGTCTTGAGGGCTaGGATGGTTCTGTTGGCCATTCCACCATAGCAAAGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LLPELGKLPLSGLEG*DGSVGHSTIAKGQL
Trigger: GAGCTGGCCCTTTGCTATGGTGGAATGGCCAACAGAACCATCTCAGCCCTCAAGACCACTCAGAGGCAGCTTTCCAAGCTCTGGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 90 bp GCAGCTCCTCCTTCCAGAGCTTGGAAAGCTGCCTCTGAGTGGTCTTaGGGGCTGAGATGGTTCTGTTGGCCATTCCACCATAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: AAPPSRAWKAASEWS*GLRWFCWPFHHSKG
Trigger: CCCTTTGCTATGGTGGAATGGCCAACAGAACCATCTCAGCCCTCAAGACCACTCAGAGGCAGCTTTCCAAGCTCTGGAAGGAGGAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 90 bp GTTGAGGCCTGTATCCACGTCACACGCTCCCCTTCAAATCGCAGCTaGTTCCGAGGAGTGTCTTTCAGCCTCAGCAACTCTGGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: VEACIHVTRSPSNRS*FRGVSFSLSNSGGK
Trigger: TTTTCCCCCAGAGTTGCTGAGGCTGAAAGACACTCCTCGGAAGCAGCTGCGATTTGAAGGGGAGCGTGTGACGTGGATACAGGCCTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379416.4
ENST00000491727.5
CDS-3UTR CAA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCGAGGGAAGGTTGGTTTaGCACAGCCGCCCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSEGRLV*HSRPVP
Trigger: GGGCACTGGGCGGCTGTGCAAAACCAACCTTCCCTC...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 90 bp TTTCCTTGGAAGGCATTCTCAATCTCCTCCATGGTGGGCTCGGGCTaGTTCCGGAGCAGTGTGTACATACTCATGACGATGCCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: FPWKAFSISSMVGSG*FRSSVYILMTMPGV
Trigger: CACCCCTGGCATCGTCATGAGTATGTACACACTGCTCCGGAATCAGCCCGAGCCCACCATGGAGGAGATTGAGAATGCCTTCCAAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 90 bp ACACAAAGAGCTCCATCTCCCCTGCCTCGCCTTTTGGAACAGCAATaGTGCAGTGAGTCTCCAGGTAGAAGTGCTCTTGGCCACCGATGT +
Preference number: 5 (lower is better)
Translates to: TQRAPSPLPRLLEQQ*CSESPGRSALGHRC
Trigger: ACATCGGTGGCCAAGAGCACTTCTACCTGGAGACTCACTGCACCATTGCTGTTCCAAAAGGCGAGGCAGGGGAGATGGAGCTCTTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGGATGCAGCCTCGTCTaGGTGCTTCCTATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: STILPPWPEPQILSGRRLGCSLV*VLPIPS
Trigger: GGAAGGAATAGGAAGCACCAAGACGAGGCTGCATCC...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 90 bp CACTGGTTACCTTGGCAATGTCATCTTCTCTCCGGGAGGCCTGCTTaGATGCTGAGAAATACTCCCCCTCCCTGCTGTAGGGGATCTCTA +
Preference number: 5 (lower is better)
Translates to: HWLPWQCHLLSGRPA*MLRNTPPPCCRGSL
Trigger: TAGAGATCCCCTACAGCAGGGAGGGGGAGTATTTCTCAGCATTCAAGCAGGCCTCCCGGAGAGAAGATGACATTGCCAAGGTAACCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 90 bp CAAAGAGCTCCATCTCCCCTGCCTCGCCTTTTGGAACAGCAATGGTaGAGTGAGTCTCCAGGTAGAAGTGCTCTTGGCCACCGATGTATA +
Preference number: 5 (lower is better)
Translates to: QRAPSPLPRLLEQQW*SESPGRSALGHRCI
Trigger: TATACATCGGTGGCCAAGAGCACTTCTACCTGGAGACTCACTGCACCATTGCTGTTCCAAAAGGCGAGGCAGGGGAGATGGAGCTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCAGGTCCAGCAGCTCCTaGAGGGTTGAGGCCTGTATC +
Preference number: 5 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSRSSSS*RVEACI
Trigger: GATACAGGCCTCAACCCTCAAGGAGCTGCTGGACCT...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 90 bp GGCTTTTGGCAATTCTCTCCTGCACAGGATGCAGCCTCGTCTTGGTaGTTCCTATTCCTTCCACAGTTGTCACTGCAACATGGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: GFWQFSPAQDAASSW*FLFLPQLSLQHGAR
Trigger: CCTTGCACCATGTTGCAGTGACAACTGTGGAAGGAATAGGAAGCACCAAGACGAGGCTGCATCCTGTGCAGGAGAGAATTGCCAAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 90 bp GGTCTTCATGGTGTTCTGTGTAGACACAAAGAGCTCCATCTCCCCTaGCTCGCCTTTTGGAACAGCAATGGTGCAGTGAGTCTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: GLHGVLCRHKELHLP*LAFWNSNGAVSLQV
Trigger: TACCTGGAGACTCACTGCACCATTGCTGTTCCAAAAGGCGAGGCAGGGGAGATGGAGCTCTTTGTGTCTACACAGAACACCATGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 90 bp CTATTCCTTCCACAGTTGTCACTGCAACATGGTGCAAGGAGCAGATaGGGGCCAGGCAGGCATTGGCAGAAAAGTGGACGATCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: LFLPQLSLQHGARSR*GPGRHWQKSGRSCS
Trigger: AGAACAAGATCGTCCACTTTTCTGCCAATGCCTGCCTGGCCCCCATCTGCTCCTTGCACCATGTTGCAGTGACAACTGTGGAAGGAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 90 bp GTTCTGTGTAGACACAAAGAGCTCCATCTCCCCTGCCTCGCCTTTTaGAACAGCAATGGTGCAGTGAGTCTCCAGGTAGAAGTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: VLCRHKELHLPCLAF*NSNGAVSLQVEVLL
Trigger: CAAGAGCACTTCTACCTGGAGACTCACTGCACCATTGCTGTTCCAAAAGGCGAGGCAGGGGAGATGGAGCTCTTTGTGTCTACACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCTGGGAGCCGTGGCTTTaGGCAATTCTCTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSWEPWL*AILSCT
Trigger: TGTGCAGGAGAGAATTGCCAAAAGCCACGGCTCCCA...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 90 bp GGGCTGTCTAGCCGGAAGAGTTCCTTCACGTTATTACCTGTGTGCTaGGCTCGAGCTGCACGGATGGCATCTTTGATGGCAAAGAAGATA +
Preference number: 5 (lower is better)
Translates to: GLSSRKSSFTLLPVC*ARAARMASLMAKKI
Trigger: TATCTTCTTTGCCATCAAAGATGCCATCCGTGCAGCTCGAGCTCAGCACACAGGTAATAACGTGAAGGAACTCTTCCGGCTAGACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 90 bp CCGGAAGAGTTCCTTCACGTTATTACCTGTGTGCTGAGCTCGAGCTaGACGGATGGCATCTTTGATGGCAAAGAAGATAGAAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PEEFLHVITCVLSSS*TDGIFDGKEDRSSQ
Trigger: CTGGCTGCTTCTATCTTCTTTGCCATCAAAGATGCCATCCGTGCAGCTCGAGCTCAGCACACAGGTAATAACGTGAAGGAACTCTTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGTCTCCACAGCCGAGCTaGGTTCCACTCAGCCCCAAC +
Preference number: 5 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRSPQPS*VPLSPN
Trigger: GTTGGGGCTGAGTGGAACCAAGCTCGGCTGTGGAGA...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGAGACACCATCAGAACTaGAGGTTATACAGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: STILPPWPEPQILSGRRLRHHQN*RLYRLS
Trigger: GGACAGCCTGTATAACCTCAAGTTCTGATGGTGTCT...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCTTCAGAGACAAGATCTaGCTCAGTCGCTCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSFRDKI*LSRSGR
Trigger: CCTGCCTGAGCGACTGAGCAAGATCTTGTCTCTGAA...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGCTCTCTGGCAGAAGGTaGGATTTATACAGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: STILPPWPEPQILSGRRLLSGRR*DLYSEG
Trigger: GCCTTCACTGTATAAATCCAACCTTCTGCCAGAGAG...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 90 bp CCATTCACAAAGAAAACCAATTTGTCTGCTGTCATTGTCACAGGTTaGGGTCCCCGAACTCCAGGTACCTCACTCCTAAGAGACACTGGC +
Preference number: 5 (lower is better)
Translates to: PFTKKTNLSAVIVTG*GPRTPGTSLLRDTG
Trigger: GCCAGTGTCTCTTAGGAGTGAGGTACCTGGAGTTCGGGGACCCCAACCTGTGACAATGACAGCAGACAAATTGGTTTTCTTTGTGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGGAAAAGTGGACGATCTaGTTCTGCAGACGATCATAC +
Preference number: 5 (lower is better)
Translates to: STILPPWPEPQILSGRRLEKWTI*FCRRSY
Trigger: GTATGATCGTCTGCAGAACAAGATCGTCCACTTTTC...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAATCTATGGACTTGATCTaGGCGTGGGCCCGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: HHARTDSIISRWKLLWLQSMDLI*AWARVL
Trigger: CAGCACCCGGGCCCACGCCAAGATCAAGTCCATAGA...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCCAGGTAGAAGTGCTCTaGGCCACCGATGTATATCTC +
Preference number: 5 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSQVEVL*ATDVYL
Trigger: GAGATATACATCGGTGGCCAAGAGCACTTCTACCTG...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTCCCCGGAAGGCCGTGTaGGAGGGAAGGTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTPRKAV*EGRLVL
Trigger: CAAAACCAACCTTCCCTCCAACACGGCCTTCCGGGG...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGGCCGTGGGAGAGGTGTaGGGCACAGTGTTAGTGCTT +
Preference number: 5 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRAVGEV*GTVLVL
Trigger: AAGCACTAACACTGTGCCCAACACCTCTCCCACGGC...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAATTGTCCACGCAGGCATaGCGGATCTTCTCCGGGGTG +
Preference number: 5 (lower is better)
Translates to: HHARTDSIISRWKLLWLQLSTQA*RIFSGV
Trigger: CACCCCGGAGAAGATCCGCAATGCCTGCGTGGACAA...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAACACAGGGTGGTGAACTaGTCCACGCAGGCATTGCGG +
Preference number: 5 (lower is better)
Translates to: HHARTDSIISRWKLLWLQHRVVN*STQALR
Trigger: CCGCAATGCCTGCGTGGACAAGTTCACCACCCTGTG...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGCTCTTCTACCTCTGGTaGGGCTTGATTTTGATAGCA +
Preference number: 5 (lower is better)
Translates to: STILPPWPEPQILSGRRLLFYLW*GLILIA
Trigger: TGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAG...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 90 bp TCCAAAGCCTCCTCCCATTCTCTTCACTCGAACCACAATCCGGTTTaGTGGAACCCCCAACATTTTTGCAACAAAGCTCTGGGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: SKASSHSLHSNHNPV*WNPQHFCNKALGLH
Trigger: ATGAAGACCCAGAGCTTTGTTGCAAAAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTTCGAGTGAAGAGAATGGGAGGAGGCTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 90 bp ACCGTCGGGTCCATGTTCTACCGAATTCAGCTCAGGGATCCAGGCTaGGCAGACAATCATAGGAAACAGCATATTCTTGAACTTCATCTC +
Preference number: 5 (lower is better)
Translates to: TVGSMFYRIQLRDPG*ADNHRKQHILELHL
Trigger: GAGATGAAGTTCAAGAATATGCTGTTTCCTATGATTGTCTGCCCAGCCTGGATCCCTGAGCTGAATTCGGTAGAACATGGACCCGACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379416.4
ENST00000476043.1
ENST00000491727.5
CDS CCA 90 bp AAAGCCTCCTCCCATTCTCTTCACTCGAACCACAATCCGGTTTGCTaGAACCCCCAACATTTTTGCAACAAAGCTCTGGGTCTTCATGGT +
Preference number: 5 (lower is better)
Translates to: KASSHSLHSNHNPVC*NPQHFCNKALGLHG
Trigger: ACCATGAAGACCCAGAGCTTTGTTGCAAAAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTTCGAGTGAAGAGAATGGGAGGAGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCTGCAGACGATCATACTaGGAGAGCATCACTGTGCAA +
Preference number: 5 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSCRRSY*ESITVQ
Trigger: TTGCACAGTGATGCTCTCCAAGTATGATCGTCTGCA...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAACGCCACAGACTTGACTaGCTTCCCAGCAAACCAGCG +
Preference number: 5 (lower is better)
Translates to: HHARTDSIISRWKLLWLQRHRLD*LPSKPA
Trigger: CGCTGGTTTGCTGGGAAGCAAGTCAAGTCTGTGGCG...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACTCCAGTTTACCACACTaGTCTTCCAGGTTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDSSLPH*SSRFSW
Trigger: CCAAGAGAACCTGGAAGACAAGTGTGGTAAACTGGA...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCTCTGAAACAGTAAAGTaGCACTGGCGAAAGTGGGGT +
Preference number: 5 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSSETVK*HWRKWG
Trigger: ACCCCACTTTCGCCAGTGCAACTTTACTGTTTCAGA...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGGATGTATCTATGGACTaGATCTTGGCGTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMDVSMD*ILAWAR
Trigger: CCGGGCCCACGCCAAGATCAAGTCCATAGATACATC...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGCCCTCAAGCTTCTGGTaGAAGTGTGTCAGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMPSSFW*KCVRSP
Trigger: AGGGGACCTGACACACTTCAACCAGAAGCTTGAGGG...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACTATCCTCCCTCCATGGCCAGAACCACAGATTCTCTCTGGCAGAAGGTTGCAACAATTCTCCTTGTaGAACTTGTCAACCTCACTC +
Preference number: 5 (lower is better)
Translates to: STILPPWPEPQILSGRRLQQFSL*NLSTSL
Trigger: GAGTGAGGTTGACAAGTTCAACAAGGAGAATTGTTG...CAACCTTCTGCCAGAGAGAATCTGTGGTTCTGGCCATGGAGGGAGGATAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 90 bp TTCAGAGCAAGCCACCCCATAGCTGAAGTAGTGGAAGGGGTTCCCTaGGTTAGTCTCAAAGCTGTAGCCCAGATTGGGTGTTCTATAAAA +
Preference number: 5 (lower is better)
Translates to: FRASHPIAEVVEGVP*VSLKAVAQIGCSIK
Trigger: TTTTATAGAACACCCAATCTGGGCTACAGCTTTGAGACTAACTCAGGGAACCCCTTCCACTACTTCAGCTATGGGGTGGCTTGCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACGGTTCATGCAGCAATTaGGATTATTCCCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDGSCSN*DYSHLL
Trigger: GAGGAGATGGGAATAATCCAAATTGCTGCATGAACC...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAACTCCGGGAGGCCTGCTaGAATGCTGAGAAATACTCC +
Preference number: 5 (lower is better)
Translates to: HHARTDSIISRWKLLWLQLREAC*NAEKYS
Trigger: GGAGTATTTCTCAGCATTCAAGCAGGCCTCCCGGAG...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGCTCACAGACCAGGGTTaGCAGTTTTCTGGGACACCA +
Preference number: 5 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMLTDQG*QFSGTP
Trigger: TGGTGTCCCAGAAAACTGCAAACCCTGGTCTGTGAG...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCACCCTTGGGCACCTCTaGGAAGAGCTGGACATCGGC +
Preference number: 5 (lower is better)
Translates to: LTVSFISDIKHQSNYIISTLGHL*EELDIG
Trigger: GCCGATGTCCAGCTCTTCCAAGAGGTGCCCAAGGGT...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGTTCATGAAGCCAACCTaGTATCTGGCCAGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMFMKPT*YLARKG
Trigger: TCCCTTCCTGGCCAGATACAAGGTTGGCTTCATGAA...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGCATGATACTGAGAGCTaGCTAGGCATTCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMHDTES*LGILPS
Trigger: GCTGGGAAGAATGCCTAGCAAGCTCTCAGTATCATG...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCTGTCATTGTCACAGGTaGGGGTCCCCGAACTCCAGG +
Preference number: 5 (lower is better)
Translates to: LTVSFISDIKHQSNYIISCHCHR*GSPNSR
Trigger: CCTGGAGTTCGGGGACCCCAACCTGTGACAATGACA...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAAGCGGCACAGATTTCCTaGGAAGGCATTCTCAATCTC +
Preference number: 5 (lower is better)
Translates to: HHARTDSIISRWKLLWLQAAQIS*EGILNL
Trigger: GAGATTGAGAATGCCTTCCAAGGAAATCTGTGCCGC...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACGGAAACAGCATATTCTaGAACTTCATCTCAATGCCA +
Preference number: 5 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDGNSIF*NFISMP
Trigger: TGGCATTGAGATGAAGTTCAAGAATATGCTGTTTCC...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGATGCCACTGGTTACCTaGGCAATGTCATCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRMPLVT*AMSSSL
Trigger: GAGAGAAGATGACATTGCCAAGGTAACCAGTGGCAT...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCCCCCTGCCTCGCCTTTaGGAACAGCAATGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: LTVSFISDIKHQSNYIISPLPRL*EQQWCS
Trigger: ACTGCACCATTGCTGTTCCAAAAGGCGAGGCAGGGG...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGGAACCCCCAACATTTTaGCAACAAAGCTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: LWESSSKDRHHQNLRLYREPPTF*QQSSGS
Trigger: AGACCCAGAGCTTTGTTGCAAAAATGTTGGGGGTTC...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTGAACCACAATCCGGTTaGCTGGAACCCCCAACATTT +
Preference number: 5 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTEPQSG*LEPPTF
Trigger: AAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTTC...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGTTGCTGTTCATTGGTTaGAAGGCCAGGCTTTCACAG +
Preference number: 5 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMLLFIG*KARLSQ
Trigger: CTGTGAAAGCCTGGCCTTCAAACCAATGAACAGCAA...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TTGAGGTTATACAGGCTGTCCAGTAAGTGGGGAATAGCACAAACCCTTCCCGACTACCCCACTGCCTCATaGCAAAATTTGAGTATAGAT +
Preference number: 5 (lower is better)
Translates to: LRLYRLSSKWGIAQTLPDYPTAS*QNLSID
Trigger: ATCTATACTCAAATTTTGCAATGAGGCAGTGGGGTA...GTCGGGAAGGGTTTGTGCTATTCCCCACTTACTGGACAGCCTGTATAACCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTGTGAACTCCTCTGGTTaGAATAAAGATGGCGAGAGG +
Preference number: 5 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTVNSSG*NKDGER
Trigger: CCTCTCGCCATCTTTATTCAAACCAGAGGAGTTCAC...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCTGGGTGTTCCCCACATaGCTGAAGTGGTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: LTVSFISDIKHQSNYIISWVFPT*LKWSTS
Trigger: TGAGGTGGACCACTTCAGCAATGTGGGGAACACCCA...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGTTCTCCTTGTTGAACTaGTCAACCTCACTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRFSLLN*STSLFR
Trigger: TCGGAAGAGTGAGGTTGACAAGTTCAACAAGGAGAA...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCAAGCTTATTCCAAACTaGGTGGGAATTATGCACAAT +
Preference number: 5 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSKLIPN*VGIMHN
Trigger: ATTGTGCATAATTCCCACCAAGTTTGGAATAAGCTT...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGGCACGGATGGCATCTTaGATGGCAAAGAAGATAGAA +
Preference number: 5 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMARMAS*MAKKIE
Trigger: TTCTATCTTCTTTGCCATCAAAGATGCCATCCGTGC...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp AACCCAGGCTTCTTGGCTCTTCTACCTCTGGTTGGGCTTGATTTTGATAGCAGCATTCAAGGTTATGCTTaGCTGTTCATTGGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: NPGFLALLPLVGLDFDSSIQGYA*LFIGLK
Trigger: CTTCAAACCAATGAACAGCAAAGCATAACCTTGAAT...GCTGCTATCAAAATCAAGCCCAACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACCATGCCAGGACTGATAGCATCATTTCTAGGTGGAAATTACTTTGGCTTCAATCTGTGGTTCCTGGCTaGAATAAAACTCTCATGCCA +
Preference number: 5 (lower is better)
Translates to: HHARTDSIISRWKLLWLQSVVPG*NKTLMP
Trigger: TGGCATGAGAGTTTTATTCAAGCCAGGAACCACAGA...TTGAAGCCAAAGTAATTTCCACCTAGAAATGATGCTATCAGTCCTGGCATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TTGTGGGAATCCTCTTCAAAGGACAGACACCATCAGAACTTGAGGTTATACAGGTACCTCTGGTTGGGCTaGATTTTGATAGCAGCATTT +
Preference number: 5 (lower is better)
Translates to: LWESSSKDRHHQNLRLYRYLWLG*ILIAAF
Trigger: AAATGCTGCTATCAAAATCAAGCCCAACCAGAGGTA...CCTGTATAACCTCAAGTTCTGATGGTGTCTGTCCTTTGAAGAGGATTCCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCGAGAACCCAGGCTTCTaGGCTCTTCTACCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LTVSFISDIKHQSNYIISENPGF*ALLPLV
Trigger: AACCAGAGGTAGAAGAGCCAAGAAGCCTGGGTTCTC...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTTCACAGGAAGGGGAATaGACAGTCCAAGATCACAAA +
Preference number: 5 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTSQEGE*TVQDHK
Trigger: TTTGTGATCTTGGACTGTCAATTCCCCTTCCTGTGA...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGATGTTTGTTCTTCCCTaGTTCTCTTTACCAACCGCA +
Preference number: 5 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMMFVLP*FSLPTA
Trigger: TGCGGTTGGTAAAGAGAACAAGGGAAGAACAAACAT...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCTGTGACAGTGACACATaGTCCACCCAGCACCATGTA +
Preference number: 5 (lower is better)
Translates to: LTVSFISDIKHQSNYIISCDSDT*STQHHV
Trigger: TACATGGTGCTGGGTGGACAATGTGTCACTGTCACA...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp TCCACCCAGCACCATGTAGGGATTAAATCACCATTTGGAGCAATAAAAGGGATGACAAAGAAAACCAATTaGTCTGCTGTCATTGTCACA +
Preference number: 5 (lower is better)
Translates to: STQHHVGIKSPFGAIKGMTKKTN*SAVIVT
Trigger: TGTGACAATGACAGCAGACAAATTGGTTTTCTTTGT...CATCCCTTTTATTGCTCCAAATGGTGATTTAATCCCTACATGGTGCTGGGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CTGACAGTTTCATTTATTAGTGACATCAAGCACCAGTCCAACTATATCATTTCCGGTAGGCCAAAAGGGTaGTCTCTGGATCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: LTVSFISDIKHQSNYIISGRPKG*SLDLHF
Trigger: AAAATGCAGATCCAGAGACAACCCTTTTGGCCTACC...GGAAATGATATAGTTGGACTGGTGCTTGATGTCACTAATAAATGAAACTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS-3UTR CAA 90 bp CACTTGTCTTCCAAATCCCATCTTGACAAATCACAGGTCTGTCATTCTGTGACTTTCCAACAATTCTCCTaGTTGAACTTGTCAACCTCA +
Preference number: 5 (lower is better)
Translates to: HLSSKSHLDKSQVCHSVTFQQFS*LNLSTS
Trigger: TGAGGTTGACAAGTTCAACAAGGAGAATTGTTGGAA...AGTCACAGAATGACAGACCTGTGATTTGTCAAGATGGGATTTGGAAGACAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp ACGGCCTCACCAGAGGCCTGCATGTCCGCTGCCAGGTaGGGCAGGGGCCGGCCCACCATGTCCTCCTCAGAC +
Preference number: 6 (lower is better)
Translates to: TASPEACMSAAR*GRGRPTMSSSD
Trigger: GTCTGAGGAGGACATGGTGGGCCGGCCCCTGCCCCACCTGGCAGCGGACATGCAGGCCTCTGGTGAGGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp GGAATGTCGTCACAGTACACGGCCTCACCAGAGGCCTaGATGTCCGCTGCCAGGTGGGGCAGGGGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: GMSSQYTASPEA*MSAARWGRGRP
Trigger: GGGCCGGCCCCTGCCCCACCTGGCAGCGGACATGCAGGCCTCTGGTGAGGCCGTGTACTGTGACGACATTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp AAGTCCACCATGCCACCAGGGGCATCGGGAGGCAGATaGAGCTCCTCTGCCAGTCCTGCACACACGTCCTGC +
Preference number: 6 (lower is better)
Translates to: KSTMPPGASGGR*SSSASPAHTSC
Trigger: GCAGGACGTGTGTGCAGGACTGGCAGAGGAGCTGCATCTGCCTCCCGATGCCCCTGGTGGCATGGTGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CAA 90 bp GGGACACCAGTGACACACAGGGTGGTGAACTTGTCCACGCAGGCATaGCGGATCTTCTCCGGGGTGGCAGGGCTGTCTAGCCGGAAGAGT +
Preference number: 6 (lower is better)
Translates to: GTPVTHRVVNLSTQA*RIFSGVAGLSSRKS
Trigger: ACTCTTCCGGCTAGACAGCCCTGCCACCCCGGAGAAGATCCGCAATGCCTGCGTGGACAAGTTCACCACCCTGTGTGTCACTGGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp AGAGGGGCGGCTCTCCAACAGCCTTCGATGCATAGATaGCCTTCTTGTTGGGGCAGTCGCGGAGCAGGGACA +
Preference number: 6 (lower is better)
Translates to: RGAALQQPSMHR*PSCWGSRGAGT
Trigger: TGTCCCTGCTCCGCGACTGCCCCAACAAGAAGGCCATCTATGCATCGAAGGCTGTTGGAGAGCCGCCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CAA 72 bp GTGACACACAGGGTGGTGAACTTGTCCACGCAGGCATaGCGGATCTTCTCCGGGGTGGCAGGGCTGTCTAGC +
Preference number: 6 (lower is better)
Translates to: VTHRVVNLSTQA*RIFSGVAGLSS
Trigger: GCTAGACAGCCCTGCCACCCCGGAGAAGATCCGCAATGCCTGCGTGGACAAGTTCACCACCCTGTGTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 72 bp CCTTCTTGTTGGGGCAGTCGCGGAGCAGGGACACCCTaGACTCAATGGGGATGCTGCCAAATGCCGGGATCT +
Preference number: 6 (lower is better)
Translates to: PSCWGSRGAGTP*TQWGCCQMPGS
Trigger: AGATCCCGGCATTTGGCAGCATCCCCATTGAGTTCAGGGTGTCCCTGCTCCGCGACTGCCCCAACAAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp CCACTGCCGTGGACACCACAGTGCTCCGGGTCTCCTTaGCTCCAAAGCCTCCTCCCATTCTCTTCACTCGAA +
Preference number: 6 (lower is better)
Translates to: PLPWTPQCSGSP*LQSLLPFSSLE
Trigger: TTCGAGTGAAGAGAATGGGAGGAGGCTTTGGAGGCAAGGAGACCCGGAGCACTGTGGTGTCCACGGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp CAGGGACACCCTGAACTCAATGGGGATGCTGCCAAATaGCGGGATCTTGTAGGTGCTAGGGCCACGGGTGTG +
Preference number: 6 (lower is better)
Translates to: QGHPELNGDAAK*RDLVGARATGV
Trigger: CACACCCGTGGCCCTAGCACCTACAAGATCCCGGCATTTGGCAGCATCCCCATTGAGTTCAGGGTGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp CACCATCCCTGGCAAAGGTCCGGAAGCCCTGGAGGATaGGTCTGTAGCCTGTGCAGCGGCACAGATTTCCTT +
Preference number: 6 (lower is better)
Translates to: HHPWQRSGSPGG*VCSLCSGTDFL
Trigger: AAGGAAATCTGTGCCGCTGCACAGGCTACAGACCCATCCTCCAGGGCTTCCGGACCTTTGCCAGGGATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp ACTTGTCCACGCAGGCATTGCGGATCTTCTCCGGGGTaGCAGGGCTGTCTAGCCGGAAGAGTTCCTTCACGT +
Preference number: 6 (lower is better)
Translates to: TCPRRHCGSSPG*QGCLAGRVPSR
Trigger: ACGTGAAGGAACTCTTCCGGCTAGACAGCCCTGCCACCCCGGAGAAGATCCGCAATGCCTGCGTGGACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 72 bp AGCAGCTCCTCCTTCCAGAGCTTGGAAAGCTGCCTCTaGGTGGTCTTGAGGGCTGAGATGGTTCTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: SSSSFQSLESCL*VVLRAEMVLLA
Trigger: GGCCAACAGAACCATCTCAGCCCTCAAGACCACTCAGAGGCAGCTTTCCAAGCTCTGGAAGGAGGAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp AGGTCCGGAAGCCCTGGAGGATGGGTCTGTAGCCTGTaGAGCGGCACAGATTTCCTTGGAAGGCATTCTCAA +
Preference number: 6 (lower is better)
Translates to: RSGSPGGWVCSL*SGTDFLGRHSQ
Trigger: TTGAGAATGCCTTCCAAGGAAATCTGTGCCGCTGCACAGGCTACAGACCCATCCTCCAGGGCTTCCGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp CACCAGTTATCAGCATGTCCTCATCACGGTCCAGCATaGATCGCACAGGGCGGCCGGTCTTATATGCAGCCA +
Preference number: 6 (lower is better)
Translates to: HQLSACPHHGPA*IAQGGRSYMQP
Trigger: TGGCTGCATATAAGACCGGCCGCCCTGTGCGATGCATGCTGGACCGTGATGAGGACATGCTGATAACTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp CCACAGTTGTCACTGCAACATGGTGCAAGGAGCAGATaGGGGCCAGGCAGGCATTGGCAGAAAAGTGGACGA +
Preference number: 6 (lower is better)
Translates to: PQLSLQHGARSR*GPGRHWQKSGR
Trigger: TCGTCCACTTTTCTGCCAATGCCTGCCTGGCCCCCATCTGCTCCTTGCACCATGTTGCAGTGACAACTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp AGAAATACTCCCCCTCCCTGCTGTAGGGGATCTCTATaGAGAGCAGTATCTCCTCCGGGCTCAGCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: RNTPPPCCRGSL*RAVSPPGSAGS
Trigger: AGACCCTGCTGAGCCCGGAGGAGATACTGCTCTCCATAGAGATCCCCTACAGCAGGGAGGGGGAGTATTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CAA 72 bp CAGCTGCTCCAGGACCCCTCTGAACACCTCTGTCTTTaGGGCAGGAAGCTTAGCAACAGCATCCACCAGGGT +
Preference number: 6 (lower is better)
Translates to: QLLQDPSEHLCL*GRKLSNSIHQG
Trigger: ACCCTGGTGGATGCTGTTGCTAAGCTTCCTGCCCAAAAGACAGAGGTGTTCAGAGGGGTCCTGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379416.4
ENST00000491727.5
CDS CAA 72 bp TTTTCTGGGACACCAGTGACACACAGGGTGGTGAACTaGTCCACGCAGGCATTGCGGATCTTCTCCGGGGTG +
Preference number: 6 (lower is better)
Translates to: FSGTPVTHRVVN*STQALRIFSGV
Trigger: CACCCCGGAGAAGATCCGCAATGCCTGCGTGGACAAGTTCACCACCCTGTGTGTCACTGGTGTCCCAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 72 bp CCTTGGCAATGTCATCTTCTCTCCGGGAGGCCTGCTTaGATGCTGAGAAATACTCCCCCTCCCTGCTGTAGG +
Preference number: 6 (lower is better)
Translates to: PWQCHLLSGRPA*MLRNTPPPCCR
Trigger: CCTACAGCAGGGAGGGGGAGTATTTCTCAGCATTCAAGCAGGCCTCCCGGAGAGAAGATGACATTGCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp AGCTGCTCCAGGACCCCTCTGAACACCTCTGTCTTTTaGGCAGGAAGCTTAGCAACAGCATCCACCAGGGTT +
Preference number: 6 (lower is better)
Translates to: SCSRTPLNTSVF*AGSLATASTRV
Trigger: AACCCTGGTGGATGCTGTTGCTAAGCTTCCTGCCCAAAAGACAGAGGTGTTCAGAGGGGTCCTGGAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379416.4
ENST00000491727.5
CDS CAA 72 bp ACATGGTGCAAGGAGCAGATGGGGGCCAGGCAGGCATaGGCAGAAAAGTGGACGATCTTGTTCTGCAGACGA +
Preference number: 6 (lower is better)
Translates to: TWCKEQMGARQA*AEKWTILFCRR
Trigger: TCGTCTGCAGAACAAGATCGTCCACTTTTCTGCCAATGCCTGCCTGGCCCCCATCTGCTCCTTGCACCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 72 bp AATGTCATCTTCTCTCCGGGAGGCCTGCTTGAATGCTaGGAAATACTCCCCCTCCCTGCTGTAGGGGATCTC +
Preference number: 6 (lower is better)
Translates to: NVIFSPGGLLEC*EILPLPAVGDL
Trigger: GAGATCCCCTACAGCAGGGAGGGGGAGTATTTCTCAGCATTCAAGCAGGCCTCCCGGAGAGAAGATGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 72 bp CCTTCCAGAGCTTGGAAAGCTGCCTCTGAGTGGTCTTaGGGGCTGAGATGGTTCTGTTGGCCATTCCACCAT +
Preference number: 6 (lower is better)
Translates to: PSRAWKAASEWS*GLRWFCWPFHH
Trigger: ATGGTGGAATGGCCAACAGAACCATCTCAGCCCTCAAGACCACTCAGAGGCAGCTTTCCAAGCTCTGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp TGTATCCACGTCACACGCTCCCCTTCAAATCGCAGCTaGTTCCGAGGAGTGTCTTTCAGCCTCAGCAACTCT +
Preference number: 6 (lower is better)
Translates to: CIHVTRSPSNRS*FRGVSFSLSNS
Trigger: AGAGTTGCTGAGGCTGAAAGACACTCCTCGGAAGCAGCTGCGATTTGAAGGGGAGCGTGTGACGTGGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379416.4
ENST00000491727.5
CDS GCA 72 bp GTTACCTTGGCAATGTCATCTTCTCTCCGGGAGGCCTaGTTGAATGCTGAGAAATACTCCCCCTCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: VTLAMSSSLREA*LNAEKYSPSLL
Trigger: CAGCAGGGAGGGGGAGTATTTCTCAGCATTCAAGCAGGCCTCCCGGAGAGAAGATGACATTGCCAAGGTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 72 bp AAGGCATTCTCAATCTCCTCCATGGTGGGCTCGGGCTaGTTCCGGAGCAGTGTGTACATACTCATGACGATG +
Preference number: 6 (lower is better)
Translates to: KAFSISSMVGSG*FRSSVYILMTM
Trigger: CATCGTCATGAGTATGTACACACTGCTCCGGAATCAGCCCGAGCCCACCATGGAGGAGATTGAGAATGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 72 bp GAGCTTGGAAAGCTGCCTCTGAGTGGTCTTGAGGGCTaGGATGGTTCTGTTGGCCATTCCACCATAGCAAAG +
Preference number: 6 (lower is better)
Translates to: ELGKLPLSGLEG*DGSVGHSTIAK
Trigger: CTTTGCTATGGTGGAATGGCCAACAGAACCATCTCAGCCCTCAAGACCACTCAGAGGCAGCTTTCCAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 72 bp AGCCACCCCATAGCTGAAGTAGTGGAAGGGGTTCCCTaGGTTAGTCTCAAAGCTGTAGCCCAGATTGGGTGT +
Preference number: 6 (lower is better)
Translates to: SHPIAEVVEGVP*VSLKAVAQIGC
Trigger: ACACCCAATCTGGGCTACAGCTTTGAGACTAACTCAGGGAACCCCTTCCACTACTTCAGCTATGGGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS TCA 72 bp AGCCGGAAGAGTTCCTTCACGTTATTACCTGTGTGCTaGGCTCGAGCTGCACGGATGGCATCTTTGATGGCA +
Preference number: 6 (lower is better)
Translates to: SRKSSFTLLPVC*ARAARMASLMA
Trigger: TGCCATCAAAGATGCCATCCGTGCAGCTCGAGCTCAGCACACAGGTAATAACGTGAAGGAACTCTTCCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp GGTGTTCTGTGTAGACACAAAGAGCTCCATCTCCCCTaGCTCGCCTTTTGGAACAGCAATGGTGCAGTGAGT +
Preference number: 6 (lower is better)
Translates to: GVLCRHKELHLP*LAFWNSNGAVS
Trigger: ACTCACTGCACCATTGCTGTTCCAAAAGGCGAGGCAGGGGAGATGGAGCTCTTTGTGTCTACACAGAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp GATTTCCTTGGAAGGCATTCTCAATCTCCTCCATGGTaGGCTCGGGCTGATTCCGGAGCAGTGTGTACATAC +
Preference number: 6 (lower is better)
Translates to: DFLGRHSQSPPW*ARADSGAVCTY
Trigger: GTATGTACACACTGCTCCGGAATCAGCCCGAGCCCACCATGGAGGAGATTGAGAATGCCTTCCAAGGAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp ACAGATTTCCTTGGAAGGCATTCTCAATCTCCTCCATaGTGGGCTCGGGCTGATTCCGGAGCAGTGTGTACA +
Preference number: 6 (lower is better)
Translates to: TDFLGRHSQSPP*WARADSGAVCT
Trigger: TGTACACACTGCTCCGGAATCAGCCCGAGCCCACCATGGAGGAGATTGAGAATGCCTTCCAAGGAAATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp TCCCAGCATCTGGGCAAGGTGAAACCCTCAAGCTTCTaGTTGAAGTGTGTCAGGTCCCCTTCTTTGTACAGG +
Preference number: 6 (lower is better)
Translates to: SQHLGKVKPSSF*LKCVRSPSLYR
Trigger: CCTGTACAAAGAAGGGGACCTGACACACTTCAACCAGAAGCTTGAGGGTTTCACCTTGCCCAGATGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CAA 90 bp AAAATGGGCTCCTGGGTTGGATCCAGGGGCGTGAACTCCTCTGGTTaGAATAAAGATGGCGAGAGGCTGACTGAGTGGTCTTTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: KMGSWVGSRGVNSSG*NKDGERLTEWSFFW
Trigger: CCAGAAGAAAGACCACTCAGTCAGCCTCTCGCCATCTTTATTCAAACCAGAGGAGTTCACGCCCCTGGATCCAACCCAGGAGCCCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379416.4
ENST00000491727.5
CDS CAA 72 bp CCTGGCTTGAATAAAACTCTCATGCCACTGGTTACCTaGGCAATGTCATCTTCTCTCCGGGAGGCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: PGLNKTLMPLVT*AMSSSLREACL
Trigger: CAAGCAGGCCTCCCGGAGAGAAGATGACATTGCCAAGGTAACCAGTGGCATGAGAGTTTTATTCAAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CAA 90 bp TCTGTGGTTCCTGGCTTGAATAAAACTCTCATGCCACTGGTTACCTaGGCAATGTCATCTTCTCTCCGGGAGGCCTGCTTGAATGCTGAG +
Preference number: 6 (lower is better)
Translates to: SVVPGLNKTLMPLVT*AMSSSLREACLNAE
Trigger: CTCAGCATTCAAGCAGGCCTCCCGGAGAGAAGATGACATTGCCAAGGTAACCAGTGGCATGAGAGTTTTATTCAAGCCAGGAACCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CAA 90 bp CTCCAAAGCCTCCTCCCATTCTCTTCACTCGAACCACAATCCGGTTaGCTGGAACCCCCAACATTTTTGCAACAAAGCTCTGGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: LQSLLPFSSLEPQSG*LEPPTFLQQSSGSS
Trigger: TGAAGACCCAGAGCTTTGTTGCAAAAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTTCGAGTGAAGAGAATGGGAGGAGGCTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CAA 72 bp CAGCATCTGGGCAAGGTGAAACCCTCAAGCTTCTGGTaGAAGTGTGTCAGGTCCCCTTCTTTGTACAGGTTT +
Preference number: 6 (lower is better)
Translates to: QHLGKVKPSSFW*KCVRSPSLYRF
Trigger: AAACCTGTACAAAGAAGGGGACCTGACACACTTCAACCAGAAGCTTGAGGGTTTCACCTTGCCCAGATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp AGGCAGGCATTGGCAGAAAAGTGGACGATCTTGTTCTaGAGACGATCATACTTGGAGAGCATCACTGTGCAA +
Preference number: 6 (lower is better)
Translates to: RQALAEKWTILF*RRSYLESITVQ
Trigger: TTGCACAGTGATGCTCTCCAAGTATGATCGTCTGCAGAACAAGATCGTCCACTTTTCTGCCAATGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp TCCTCCCATTCTCTTCACTCGAACCACAATCCGGTTTaGTGGAACCCCCAACATTTTTGCAACAAAGCTCTG +
Preference number: 6 (lower is better)
Translates to: SSHSLHSNHNPV*WNPQHFCNKAL
Trigger: CAGAGCTTTGTTGCAAAAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTTCGAGTGAAGAGAATGGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp AAGAAAACCAATTTGTCTGCTGTCATTGTCACAGGTTaGGGTCCCCGAACTCCAGGTACCTCACTCCTAAGA +
Preference number: 6 (lower is better)
Translates to: KKTNLSAVIVTG*GPRTPGTSLLR
Trigger: TCTTAGGAGTGAGGTACCTGGAGTTCGGGGACCCCAACCTGTGACAATGACAGCAGACAAATTGGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp TCCCATTCTCTTCACTCGAACCACAATCCGGTTTGCTaGAACCCCCAACATTTTTGCAACAAAGCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: SHSLHSNHNPVC*NPQHFCNKALG
Trigger: ACCCAGAGCTTTGTTGCAAAAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTTCGAGTGAAGAGAATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CAA 72 bp CTCCTCCCATTCTCTTCACTCGAACCACAATCCGGTTaGCTGGAACCCCCAACATTTTTGCAACAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: LLPFSSLEPQSG*LEPPTFLQQSS
Trigger: AGAGCTTTGTTGCAAAAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTTCGAGTGAAGAGAATGGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp AACCACAATCCGGTTTGCTGGAACCCCCAACATTTTTaGAACAAAGCTCTGGGTCTTCATGGTGTTCTGTGT +
Preference number: 6 (lower is better)
Translates to: NHNPVCWNPQHF*NKALGLHGVLC
Trigger: ACACAGAACACCATGAAGACCCAGAGCTTTGTTGCAAAAATGTTGGGGGTTCCAGCAAACCGGATTGTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS GCA 72 bp TTCCTTCACGTTATTACCTGTGTGCTGAGCTCGAGCTaGACGGATGGCATCTTTGATGGCAAAGAAGATAGA +
Preference number: 6 (lower is better)
Translates to: FLHVITCVLSSS*TDGIFDGKEDR
Trigger: TCTATCTTCTTTGCCATCAAAGATGCCATCCGTGCAGCTCGAGCTCAGCACACAGGTAATAACGTGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp GGTCTTTCTGAAACAGTAAAGTTGCACTGGCGAAAGTaGGGTCCAGTTTACCACACTTGTCTTCCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: GLSETVKLHWRK*GPVYHTCLPGS
Trigger: AGAACCTGGAAGACAAGTGTGGTAAACTGGACCCCACTTTCGCCAGTGCAACTTTACTGTTTCAGAAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379416.4
CDS CCA 72 bp TCCATGTTCTACCGAATTCAGCTCAGGGATCCAGGCTaGGCAGACAATCATAGGAAACAGCATATTCTTGAA +
Preference number: 6 (lower is better)
Translates to: SMFYRIQLRDPG*ADNHRKQHILE
Trigger: TTCAAGAATATGCTGTTTCCTATGATTGTCTGCCCAGCCTGGATCCCTGAGCTGAATTCGGTAGAACATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379416.4
ENST00000476043.1
ENST00000491727.5