RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNT9B (Homo sapiens)

Ensembl gene IDs: ENSG00000158955

Ensembl transcript IDs: ENST00000290015.7, ENST00000393461.2, ENST00000575372.5, ENST00000613753.2, ENST00000633488.1, ENST00000633753.1

Found 641 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGTGGATCAGGGTGCTCTGGCCTCCACGTTGCTCCCAGGCCCCCTaGTCTGCCAGTGAGGTCCCTGCTGCCTTACGCCCAGCACTGAGC +
Preference number: 1 (lower is better)
Translates to: WWIRVLWPPRCSQAP*SASEVPAALRPALS
Trigger: GCTCAGTGCTGGGCGTAAGGCAGCAGGGACCTCACTGGCAGAGCAGGGGGCCTGGGAGCAACGTGGAGGCCAGAGCACCCTGATCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp GGGGGCACTTGGGGCATCCTGTCCATTAGACTCCCTCACTCTAGCTaGCTGCAGGAGGACATGCAGGCCCAGTCTGCCAGCGCAGCTGAC +
Preference number: 1 (lower is better)
Translates to: GGTWGILSIRLPHSS*LQEDMQAQSASAAD
Trigger: GTCAGCTGCGCTGGCAGACTGGGCCTGCATGTCCTCCTGCAGGCAGCTAGAGTGAGGGAGTCTAATGGACAGGATGCCCCAAGTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp CCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGTGGCATGTTGGTaGATCAGGGTGCTCTGGCCTCCACGTTGCTCCCAGGCCCCCTGC +
Preference number: 1 (lower is better)
Translates to: PGTASHEVRMQVACW*IRVLWPPRCSQAPC
Trigger: GCAGGGGGCCTGGGAGCAACGTGGAGGCCAGAGCACCCTGATCCACCAACATGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp GACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGTGGCATGTTaGTGGATCAGGGTGCTCTGGCCTCCACGTTGCTCCCAGGCCCCC +
Preference number: 1 (lower is better)
Translates to: DPGTASHEVRMQVAC*WIRVLWPPRCSQAP
Trigger: GGGGGCCTGGGAGCAACGTGGAGGCCAGAGCACCCTGATCCACCAACATGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp GGTTGGGAGGGGCCCAGTGGTGTAGCCCAAGCTTCTTGGGCAGTGTaGGCAGAAGGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCT +
Preference number: 1 (lower is better)
Translates to: GWEGPSGVAQASWAV*AEGPLGVASMGSWS
Trigger: AGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCCTTCTGCCCACACTGCCCAAGAAGCTTGGGCTACACCACTGGGCCCCTCCCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp CGCCACGTCACTGCCAGGCACCAGGAAGCTGTTGCCCTCCTCCTCTaGGCTGGGAGTGAAGATTCCTTTGGCCAGCAGGGAACACAGGGA +
Preference number: 1 (lower is better)
Translates to: RHVTARHQEAVALLL*AGSEDSFGQQGTQG
Trigger: TCCCTGTGTTCCCTGCTGGCCAAAGGAATCTTCACTCCCAGCGCAGAGGAGGAGGGCAACAGCTTCCTGGTGCCTGGCAGTGACGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp CCAGCCATGAAGTCAGAATGCAGGTGGCATGTTGGTGGATCAGGGTaGTCTGGCCTCCACGTTGCTCCCAGGCCCCCTGCTCTGCCAGTG +
Preference number: 1 (lower is better)
Translates to: PAMKSECRWHVGGSG*SGLHVAPRPPALPV
Trigger: CACTGGCAGAGCAGGGGGCCTGGGAGCAACGTGGAGGCCAGAGCACCCTGATCCACCAACATGCCACCTGCATTCTGACTTCATGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp GTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCGGCCTCCTaGTCAGTGGGGGACCCGGTCAGGTCAGGCTGTATCTCCCCAGAC +
Preference number: 1 (lower is better)
Translates to: VMEYRFVLLPSDPAS*SVGDPVRSGCISPD
Trigger: GTCTGGGGAGATACAGCCTGACCTGACCGGGTCCCCCACTGAGCAGGAGGCCGGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp CCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGTaGCATGTTGGTGGATCAGGGTGCTCTGGCCTCCACGTTGCTCCC +
Preference number: 1 (lower is better)
Translates to: PPTTLALPAMKSECR*HVGGSGCSGLHVAP
Trigger: GGGAGCAACGTGGAGGCCAGAGCACCCTGATCCACCAACATGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp AATACAGGTTTGTCCTCCTTCCCAGCGACCCGGCCTCCTGCTCAGTaGGGGACCCGGTCAGGTCAGGCTGTATCTCCCCAGACAGAGGGT +
Preference number: 1 (lower is better)
Translates to: NTGLSSFPATRPPAQ*GTRSGQAVSPQTEG
Trigger: ACCCTCTGTCTGGGGAGATACAGCCTGACCTGACCGGGTCCCCCACTGAGCAGGAGGCCGGGTCGCTGGGAAGGAGGACAAACCTGTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp GCAGTGTGGGCAGAAGGACCCCTTGGAGTGGCCTCCATGGGTTCCTaGTCTCTCCAGCCTTCTCAGGCAGCCAAAGCCCCTGAGACATGG +
Preference number: 1 (lower is better)
Translates to: AVWAEGPLGVASMGS*SLQPSQAAKAPETW
Trigger: CCATGTCTCAGGGGCTTTGGCTGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCCTTCTGCCCACACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp CTTCTTGGGCAGTGTGGGCAGAAGGACCCCTTGGAGTGGCCTCCATaGGTTCCTGGTCTCTCCAGCCTTCTCAGGCAGCCAAAGCCCCTG +
Preference number: 1 (lower is better)
Translates to: LLGQCGQKDPLEWPP*VPGLSSLLRQPKPL
Trigger: CAGGGGCTTTGGCTGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCCTTCTGCCCACACTGCCCAAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp CCCATCTCAGCCAGGCTCCCGCCTTCACTTCCAGCTGGCACTGCCTaGCTTGGCATTCCTAGCCCAGCAGTTCACCTCCCAAGAACATGC +
Preference number: 1 (lower is better)
Translates to: PISARLPPSLPAGTA*LGIPSPAVHLPRTC
Trigger: GCATGTTCTTGGGAGGTGAACTGCTGGGCTAGGAATGCCAAGGCAGGCAGTGCCAGCTGGAAGTGAAGGCGGGAGCCTGGCTGAGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp AAGCTCACTCAAGAGCCAGCTGAGAAACTGAGCTCGCCACGTCACTaGCAGGCACCAGGAAGCTGTTGCCCTCCTCCTCTGCGCTGGGAG +
Preference number: 1 (lower is better)
Translates to: KLTQEPAEKLSSPRH*QAPGSCCPPPLRWE
Trigger: CTCCCAGCGCAGAGGAGGAGGGCAACAGCTTCCTGGTGCCTGGCAGTGACGTGGCGAGCTCAGTTTCTCAGCTGGCTCTTGAGTGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp GCAACAGGAACCCCCAGCCTGGTCCAGGGGCTGTGCATCCATGTGTaGCTGTGTGGAGGTACCAGTCTCTCCTCCTTTCACAGAGGGCCT +
Preference number: 1 (lower is better)
Translates to: ATGTPSLVQGLCIHV*LCGGTSLSSFHRGP
Trigger: AGGCCCTCTGTGAAAGGAGGAGAGACTGGTACCTCCACACAGGCACACATGGATGCACAGCCCCTGGACCAGGCTGGGGGTTCCTGTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp CAGCCGGGCCTCTGCAGTCAAAAATCCTTCCAGCATCCAGCAGACTaGCCTGATCCACTGGAGACTGGGCAGCTCCTCCTCGCCCTTGGA +
Preference number: 1 (lower is better)
Translates to: QPGLCSQKSFQHPAD*PDPLETGQLLLALG
Trigger: TCCAAGGGCGAGGAGGAGCTGCCCAGTCTCCAGTGGATCAGGGCAGTCTGCTGGATGCTGGAAGGATTTTTGACTGCAGAGGCCCGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp TGGTGTAGCCCAAGCTTCTTGGGCAGTGTGGGCAGAAGGACCCCTTaGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGC +
Preference number: 1 (lower is better)
Translates to: WCSPSFLGSVGRRTP*SGLHGFLVSPAFSG
Trigger: GCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCCTTCTGCCCACACTGCCCAAGAAGCTTGGGCTACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp TCATCTGTAGGTTGGGAGGGGCCCAGTGGTGTAGCCCAAGCTTCTTaGGCAGTGTGGGCAGAAGGACCCCTTGGAGTGGCCTCCATGGGT +
Preference number: 1 (lower is better)
Translates to: SSVGWEGPSGVAQAS*AVWAEGPLGVASMG
Trigger: ACCCATGGAGGCCACTCCAAGGGGTCCTTCTGCCCACACTGCCCAAGAAGCTTGGGCTACACCACTGGGCCCCTCCCAACCTACAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp AGGCCCCAGCCACAGGAAGTCACCAAAGCTCACTCAAGAGCCAGCTaGGAAACTGAGCTCGCCACGTCACTGCCAGGCACCAGGAAGCTG +
Preference number: 1 (lower is better)
Translates to: RPQPQEVTKAHSRAS*ETELATSLPGTRKL
Trigger: CAGCTTCCTGGTGCCTGGCAGTGACGTGGCGAGCTCAGTTTCTCAGCTGGCTCTTGAGTGAGCTTTGGTGACTTCCTGTGGCTGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp GGGCCTCTGCAGTCAAAAATCCTTCCAGCATCCAGCAGACTGCCCTaGTCCACTGGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCT +
Preference number: 1 (lower is better)
Translates to: GPLQSKILPASSRLP*STGDWAAPPRPWRS
Trigger: AGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCCAGTGGATCAGGGCAGTCTGCTGGATGCTGGAAGGATTTTTGACTGCAGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp GTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTATaGATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGGGCAGC +
Preference number: 1 (lower is better)
Translates to: VVSGTLVCIGTHAGL*MHVMTVCPEGRLGS
Trigger: GCTGCCCAGCCGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR GCA 90 bp CTTTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATaGAGGTGGCATGTTGGTGGATCAGGGTGCTCTGGCCTCCACGTT +
Preference number: 1 (lower is better)
Translates to: LCPPTTLALPAMKSE*RWHVGGSGCSGLHV
Trigger: AACGTGGAGGCCAGAGCACCCTGATCCACCAACATGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp GCAAAGTGGCCAAGGGCTTCCCGAAAGAAGTCACTTCCTCCTGGGTaGCATCGGGCCCCACTCTGGGGAAGTACAATGCCTCCAGCAAGG +
Preference number: 1 (lower is better)
Translates to: AKWPRASRKKSLPPG*HRAPLWGSTMPPAR
Trigger: CCTTGCTGGAGGCATTGTACTTCCCCAGAGTGGGGCCCGATGCCACCCAGGAGGAAGTGACTTCTTTCGGGAAGCCCTTGGCCACTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp AACACAGGGAGGGGCCGTTGTCTCCCTGTTCAACCTCAGGTGCACTaGGTCCCGCCTTGGTGGCTAGTTCTCCCACCTGTCTTACCTGCA +
Preference number: 1 (lower is better)
Translates to: NTGRGRCLPVQPQVH*VPPWWLVLPPVLPA
Trigger: TGCAGGTAAGACAGGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTGCACCTGAGGTTGAACAGGGAGACAACGGCCCCTCCCTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp GCCACAGGAAGTCACCAAAGCTCACTCAAGAGCCAGCTGAGAAACTaGGCTCGCCACGTCACTGCCAGGCACCAGGAAGCTGTTGCCCTC +
Preference number: 1 (lower is better)
Translates to: ATGSHQSSLKSQLRN*ARHVTARHQEAVAL
Trigger: GAGGGCAACAGCTTCCTGGTGCCTGGCAGTGACGTGGCGAGCTCAGTTTCTCAGCTGGCTCTTGAGTGAGCTTTGGTGACTTCCTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp CATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCAGCCAAAGCCCCTaGGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCA +
Preference number: 1 (lower is better)
Translates to: HGFLVSPAFSGSQSP*DMGLHLGEVPTCHP
Trigger: TGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGCTTTGGCTGCCTGAGAAGGCTGGAGAGACCAGGAACCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp ATGTTAGCAGCCAGCCACTGCCTAGATGCCTTAGAGCCTGCCCTTTaGCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGC +
Preference number: 1 (lower is better)
Translates to: MLAASHCLDALEPAL*PPTTLALPAMKSEC
Trigger: GCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAAAGGGCAGGCTCTAAGGCATCTAGGCAGTGGCTGGCTGCTAACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp GCACTTGGGGCATCCTGTCCATTAGACTCCCTCACTCTAGCTGCCTaGAGGAGGACATGCAGGCCCAGTCTGCCAGCGCAGCTGACTTTT +
Preference number: 1 (lower is better)
Translates to: ALGASCPLDSLTLAA*RRTCRPSLPAQLTF
Trigger: AAAAGTCAGCTGCGCTGGCAGACTGGGCCTGCATGTCCTCCTGCAGGCAGCTAGAGTGAGGGAGTCTAATGGACAGGATGCCCCAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp CACAGAGCGGACATGTGCTTACCAGCTCCGAGACAGACCCAGTCATaGAATACAGGTTTGTCCTCCTTCCCAGCGACCCGGCCTCCTGCT +
Preference number: 1 (lower is better)
Translates to: HRADMCLPAPRQTQS*NTGLSSFPATRPPA
Trigger: AGCAGGAGGCCGGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCTGGTAAGCACATGTCCGCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp AAGACCCCACAAGCCAAGGAGCCCTCAGAACCTGCACTGTGCCATTaGCTTGGGGTGTCCATGTTAGCAGCCAGCCACTGCCTAGATGCC +
Preference number: 1 (lower is better)
Translates to: KTPQAKEPSEPALCH*LGVSMLAASHCLDA
Trigger: GGCATCTAGGCAGTGGCTGGCTGCTAACATGGACACCCCAAGTCAATGGCACAGTGCAGGTTCTGAGGGCTCCTTGGCTTGTGGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp TCCTGTCCATTAGACTCCCTCACTCTAGCTGCCTGCAGGAGGACATaGAGGCCCAGTCTGCCAGCGCAGCTGACTTTTGCAAAAGCAGCC +
Preference number: 1 (lower is better)
Translates to: SCPLDSLTLAACRRT*RPSLPAQLTFAKAA
Trigger: GGCTGCTTTTGCAAAAGTCAGCTGCGCTGGCAGACTGGGCCTGCATGTCCTCCTGCAGGCAGCTAGAGTGAGGGAGTCTAATGGACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp AGTAGCAGGGGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTaGCAGCTACACCAGGAAGCCTGCTATGGCAAGACACTGCCAAGT +
Preference number: 1 (lower is better)
Translates to: SSRGNKEAVCQGGMW*QLHQEACYGKTLPS
Trigger: ACTTGGCAGTGTCTTGCCATAGCAGGCTTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCCCCTGCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CCA 90 bp TCCTGGTCTCTCCAGCCTTCTCAGGCAGCCAAAGCCCCTGAGACATaGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCCAA +
Preference number: 1 (lower is better)
Translates to: SWSLQPSQAAKAPET*DSTWGKCQHAIQIQ
Trigger: TTGGATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGCTTTGGCTGCCTGAGAAGGCTGGAGAGACCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp CCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATaGCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCG +
Preference number: 1 (lower is better)
Translates to: PRNGGEWHTRVHWHT*RFMHACDDSLPRGP
Trigger: CGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR GCA 90 bp GCACTGAGTCCCGCCTTGGTGGCTAGTTCTCCCACCTGTCTTACCTaGACTGGTGGTAGTTTTGAGCACGGCTGGGTGAGTGTGCATAAC +
Preference number: 1 (lower is better)
Translates to: ALSPALVASSPTCLT*TGGSFEHGWVSVHN
Trigger: GTTATGCACACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCAGGTAAGACAGGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp AGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTaGTTACCAGCTCCGAGACAGACCCAGTCATGGAATACAGGTTTG +
Preference number: 1 (lower is better)
Translates to: RVWMEPTRAHHRADM*LPAPRQTQSWNTGL
Trigger: CAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCTGGTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp GTCATAGCTCGTGAGCCAGCTGTTCTTCAGTATTGTGAACTCAGCTaGTATGGGGGTGTCACAGACCAGGCAGGCCCCAGCCACAGGAAG +
Preference number: 1 (lower is better)
Translates to: VIAREPAVLQYCELS*YGGVTDQAGPSHRK
Trigger: CTTCCTGTGGCTGGGGCCTGCCTGGTCTGTGACACCCCCATACCAGCTGAGTTCACAATACTGAAGAACAGCTGGCTCACGAGCTATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp GCCTGCCTTGGCATTCCTAGCCCAGCAGTTCACCTCCCAAGAACATaGTGGCTCCAAGCCATTCATCCCAGGAAGCAAGATGGAATAGCC +
Preference number: 1 (lower is better)
Translates to: ACLGIPSPAVHLPRT*WLQAIHPRKQDGIA
Trigger: GGCTATTCCATCTTGCTTCCTGGGATGAATGGCTTGGAGCCAGCATGTTCTTGGGAGGTGAACTGCTGGGCTAGGAATGCCAAGGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp TTAACGAGAGGGGCTCAGGTCAGTTTGGCTTCTCAGCCGGGCCTCTaGAGTCAAAAATCCTTCCAGCATCCAGCAGACTGCCCTGATCCA +
Preference number: 1 (lower is better)
Translates to: LTRGAQVSLASQPGL*SQKSFQHPADCPDP
Trigger: TGGATCAGGGCAGTCTGCTGGATGCTGGAAGGATTTTTGACTGCAGAGGCCCGGCTGAGAAGCCAAACTGACCTGAGCCCCTCTCGTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp CATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTaGGCTTATCTAGACCAGGGGACAGGACTATGTGCTCATGAGAGG +
Preference number: 1 (lower is better)
Translates to: HGAVCLPGDEGYQES*AYLDQGTGLCAHER
Trigger: CCTCTCATGAGCACATAGTCCTGTCCCCTGGTCTAGATAAGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp CACAGCTTTGTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTaGGAAGGGGAAGCCAGGGGGAATGAAGGGAAGGAAAGGGAGGAG +
Preference number: 1 (lower is better)
Translates to: HSFVLVVEAARDSES*EGEARGNEGKEREE
Trigger: CTCCTCCCTTTCCTTCCCTTCATTCCCCCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAACAAAGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CCA 90 bp AAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTaGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCC +
Preference number: 1 (lower is better)
Translates to: KGWPRNGGEWHTRVH*HTCRFMHACDDSLP
Trigger: GGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR CCA 90 bp TGCCTTGGCATTCCTAGCCCAGCAGTTCACCTCCCAAGAACATGCTaGCTCCAAGCCATTCATCCCAGGAAGCAAGATGGAATAGCCCCT +
Preference number: 1 (lower is better)
Translates to: CLGIPSPAVHLPRTC*LQAIHPRKQDGIAP
Trigger: AGGGGCTATTCCATCTTGCTTCCTGGGATGAATGGCTTGGAGCCAGCATGTTCTTGGGAGGTGAACTGCTGGGCTAGGAATGCCAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp TCTCCCACCTGTCTTACCTGCACTGGTGGTAGTTTTGAGCACGGCTaGGTGAGTGTGCATAACCCAGCTCTCGAGACAAGAATGAGGCCT +
Preference number: 1 (lower is better)
Translates to: SPTCLTCTGGSFEHG*VSVHNPALETRMRP
Trigger: AGGCCTCATTCTTGTCTCGAGAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCAGGTAAGACAGGTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp TTGTTGAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTaGGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTATGCA +
Preference number: 1 (lower is better)
Translates to: LLSIEGGKRLAKEWW*VAHSCALAHMPVYA
Trigger: TGCATAAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR TCA 90 bp AGATCTCACTCGGGTCCACTCAAGCACAGAAAGCTCTCCTTTCTCTaGACGGATGGCTTCTACCACCTGTGCTTTCTCCCCATCTCTGGC +
Preference number: 1 (lower is better)
Translates to: RSHSGPLKHRKLSFL*TDGFYHLCFLPISG
Trigger: GCCAGAGATGGGGAGAAAGCACAGGTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTTTCTGTGCTTGAGTGGACCCGAGTGAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp AGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTaGATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTC +
Preference number: 1 (lower is better)
Translates to: RQKAGQGMVVSGTLV*IGTHAGLCMHVMTV
Trigger: GACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR CCA 90 bp TGCCTGTGTGGAGGTACCAGTCTCTCCTCCTTTCACAGAGGGCCTTaGCAGGTGCTGCTGAAAATGTCCACAGGATCTGAGGAAATTATC +
Preference number: 1 (lower is better)
Translates to: CLCGGTSLSSFHRGP*QVLLKMSTGSEEII
Trigger: GATAATTTCCTCAGATCCTGTGGACATTTTCAGCAGCACCTGCCAAGGCCCTCTGTGAAAGGAGGAGAGACTGGTACCTCCACACAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp CAGAAGGGCAGAAAATCTACAAAAACATCACAAGGAGGGTCTGGATaGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCAG +
Preference number: 1 (lower is better)
Translates to: QKGRKSTKTSQGGSG*SPPGLITERTCAYQ
Trigger: CTGGTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCCTTGTGATGTTTTTGTAGATTTTCTGCCCTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 90 bp GACCCAGAAGGGCAGAAAATCTACAAAAACATCACAAGGAGGGTCTaGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTA +
Preference number: 1 (lower is better)
Translates to: DPEGQKIYKNITRRV*MEPTRAHHRADMCL
Trigger: TAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCCTTGTGATGTTTTTGTAGATTTTCTGCCCTTCTGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp GTACCAGTCTCTCCTCCTTTCACAGAGGGCCTTGGCAGGTGCTGCTaGAAATGTCCACAGGATCTGAGGAAATTATCAAAGTCACGTCTC +
Preference number: 1 (lower is better)
Translates to: VPVSPPFTEGLGRCC*KCPQDLRKLSKSRL
Trigger: GAGACGTGACTTTGATAATTTCCTCAGATCCTGTGGACATTTTCAGCAGCACCTGCCAAGGCCCTCTGTGAAAGGAGGAGAGACTGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp TTTATTGGTTTATTGTCTTTCTCACCCACTAGGATGTCAGCCCCATaGGGCAGAGACTTGGTCCTGTTCCTTGCTGCACCAAGCACCCAG +
Preference number: 1 (lower is better)
Translates to: FIGLLSFSPTRMSAP*GRDLVLFLAAPSTQ
Trigger: CTGGGTGCTTGGTGCAGCAAGGAACAGGACCAAGTCTCTGCCTCATGGGGCTGACATCCTAGTGGGTGAGAAAGACAATAAACCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 90 bp CAGAGACTTGGTCCTGTTCCTTGCTGCACCAAGCACCCAGGATGCTaGCTGGTGCTCAATAAGAGATCCCTAAATAATCATTGGTTGAAT +
Preference number: 1 (lower is better)
Translates to: QRLGPVPCCTKHPGC*LVLNKRSLNNHWLN
Trigger: ATTCAACCAATGATTATTTAGGGATCTCTTATTGAGCACCAGGCAGCATCCTGGGTGCTTGGTGCAGCAAGGAACAGGACCAAGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp CTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCATTATaGGTAAGACACTTTTGCCAGAGCAGAAGAAGGGGGCCTGGACCC +
Preference number: 1 (lower is better)
Translates to: LYKCQVWEFSLSLSL*VRHFCQSRRRGPGP
Trigger: GGGTCCAGGCCCCCTTCTTCTGCTCTGGCAAAAGTGTCTTACTCATAATGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp CAGCCCGTAGTGCCTGGTCTATGGAGATGTTCAGTAAATATTCATTaGACAAGTCTCTTAGGTGTGACTTTGAGCACAGCTCTCCATCTC +
Preference number: 1 (lower is better)
Translates to: QPVVPGLWRCSVNIH*TSLLGVTLSTALHL
Trigger: GAGATGGAGAGCTGTGCTCAAAGTCACACCTAAGAGACTTGTTCAATGAATATTTACTGAACATCTCCATAGACCAGGCACTACGGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 90 bp TGCATCTTTGATGTCTTCTCTCATTTAACCTCCATCCCCACCAATTaGTATAGGTTTATGCCTGCAGTAAATGGGATAGTTATAAAGCTA +
Preference number: 1 (lower is better)
Translates to: CIFDVFSHLTSIPTN*YRFMPAVNGIVIKL
Trigger: TAGCTTTATAACTATCCCATTTACTGCAGGCATAAACCTATATCAATTGGTGGGGATGGAGGTTAAATGAGAGAAGACATCAAAGATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp GGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCTCAGGGAGTTGGCCAGGGCAGGGAGAAAGGAAGCTaGCAGATGGGCGTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GDWAAPPRPWRSQGVGQGREKGS*QMGVAG
Trigger: CCCTGCCACGCCCATCTGTCAGCTTCCTTTCTCCCT...GCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGCAGGGATCAGCAGGCTaGTTTCCAGCTGGGTTAGCT +
Preference number: 2 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPQGSAG*FPAGLA
Trigger: AGCTAACCCAGCTGGAAAGCAGCCTGCTGATCCCTG...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCATGCTCCCAGGCCCCCTaGTCTGCCAGTGAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: GPLGVASMGSWSLQPSQACSQAP*SASEVP
Trigger: AGGGACCTCACTGGCAGAGCAGGGGGCCTGGGAGCA...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCTCTGGCCTCCACGTTaGTCCCAGGCCCCCTGCTCT +
Preference number: 2 (lower is better)
Translates to: GGSGWSPPGLITERTCAYLWPPR*SQAPCS
Trigger: AGAGCAGGGGGCCTGGGAGCAACGTGGAGGCCAGAG...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGGCTATGGCAAGACACTaGCAAGTGAGGGAAATGAGG +
Preference number: 2 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPAMARH*QVREMR
Trigger: CCTCATTTCCCTCACTTGGCAGTGTCTTGCCATAGC...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCCGGCCTCCTGCTCAGTaGGGGACCCGGTCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLRPPAQ*GTRSGQ
Trigger: CTGACCTGACCGGGTCCCCCACTGAGCAGGAGGCCG...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp GAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCGCCACAGGACCCGATTaGCCCATCTCAGCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: EGLDGAHQGSSQSGHVLTATGPD*PISARL
Trigger: GAGCCTGGCTGAGATGGGTCAATCGGGTCCTGTGGC...GGTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCAAGCCAGCTGAGAAACTaGGCTCGCCACGTCACTGCC +
Preference number: 2 (lower is better)
Translates to: GPLGVASMGSWSLQPSQASQLRN*ARHVTA
Trigger: GGCAGTGACGTGGCGAGCTCAGTTTCTCAGCTGGCT...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACGCACCAGGAAGCTGTTaGCCTCCTCCTCTGCGCTGG +
Preference number: 2 (lower is better)
Translates to: GGSGWSPPGLITERTCAYAPGSC*PPPLRW
Trigger: CCAGCGCAGAGGAGGAGGGCAACAGCTTCCTGGTGC...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCAGAGGTGTGTGACACCTaGAGCCCACTGCACCTGAGC +
Preference number: 2 (lower is better)
Translates to: GPLGVASMGSWSLQPSQAEVCDT*SPLHLS
Trigger: GCTCAGGTGCAGTGGGCTCCAGGTGTCACACACCTC...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCAGTGGTATCCAGGCTTTaGGGCTCCTGGGCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: GPLGVASMGSWSLQPSQAVVSRL*GSWAQS
Trigger: GCTCTGAGCCCAGGAGCCCCAAAGCCTGGATACCAC...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGCCACCTTGGGGAGGGTaGGTTGGCCCAAGCGCCGTC +
Preference number: 2 (lower is better)
Translates to: LIWVSARLAMSPALAQAQPPWGG*VGPSAV
Trigger: GACGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGG...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CAA 90 bp TCTCAGCCAGGCTCCCGCCTTCACTTCCAGCTGGCACTGCCTGCCTaGGCATTCCTAGCCCAGCAGTTCACCTCCCAAGAACATGCTGGC +
Preference number: 2 (lower is better)
Translates to: SQPGSRLHFQLALPA*AFLAQQFTSQEHAG
Trigger: GCCAGCATGTTCTTGGGAGGTGAACTGCTGGGCTAGGAATGCCAAGGCAGGCAGTGCCAGCTGGAAGTGAAGGCGGGAGCCTGGCTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CAA 90 bp TTCATCTGTAGGTTGGGAGGGGCCCAGTGGTGTAGCCCAAGCTTCTaGGGCAGTGTGGGCAGAAGGACCCCTTGGAGTGGCCTCCATGGG +
Preference number: 2 (lower is better)
Translates to: FICRLGGAQWCSPSF*GSVGRRTPWSGLHG
Trigger: CCCATGGAGGCCACTCCAAGGGGTCCTTCTGCCCACACTGCCCAAGAAGCTTGGGCTACACCACTGGGCCCCTCCCAACCTACAGATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCACCTCTGCGCTGGGAGTaGAGATTCCTTTGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: GPLGVASMGSWSLQPSQAPLRWE*RFLWPA
Trigger: TGCTGGCCAAAGGAATCTTCACTCCCAGCGCAGAGG...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCAGAGGCCATTAGGAACTaGAGGAGGCTACCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: GPLGVASMGSWSLQPSQAEAIRN*RRLPRS
Trigger: GCTCCTGGGTAGCCTCCTTCAGTTCCTAATGGCCTC...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GTGTGCCTGTGTGGAGGTACCAGTCTCTCCTCCTTTCACAGAGGGCCTTGGCAGCATGTGATGACAGTCTaGCCAGAGGGCCGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: VCLCGGTSLSSFHRGPWQHVMTV*PEGRLG
Trigger: GCCCAGCCGGCCCTCTGGGCAGACTGTCATCACATG...CTGCCAAGGCCCTCTGTGAAAGGAGGAGAGACTGGTACCTCCACACAGGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp AACGGGGGCACTTGGGGCATCCTGTCCATTAGACTCCCTCACTCTAGCTGCCTGGCTGACAGATGGGCGTaGCAGGGCCAGCAAAGTGGC +
Preference number: 2 (lower is better)
Translates to: NGGTWGILSIRLPHSSCLADRWA*QGQQSG
Trigger: GCCACTTTGCTGGCCCTGCCACGCCCATCTGTCAGC...CAGGCAGCTAGAGTGAGGGAGTCTAATGGACAGGATGCCCCAAGTGCCCCCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTAGCGGGCCTTTGTCCTaGAGCTGGCACAGGCGAGGT +
Preference number: 2 (lower is better)
Translates to: WHGAVCLPGDEGYQESWASGPLS*SWHRRG
Trigger: ACCTCGCCTGTGCCAGCTCCAGGACAAAGGCCCGCT...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp TGCCCTTTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGTGGATCAGGGTGCTCTaGCCTCCACGTTGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: CPLPSHDPGTASHEVRMQWIRVL*PPRCSQ
Trigger: CTGGGAGCAACGTGGAGGCCAGAGCACCCTGATCCA...CTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAAAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGAAAATTAGTCAGGCGTaGTGGTGCATGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPKISQA*WCMPVI
Trigger: GATTACAGGCATGCACCACCACGCCTGACTAATTTT...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CAA 90 bp ATGTGCTTACCAGCTCCGAGACAGACCCAGTCATGGAATACAGGTTaGTCCTCCTTCCCAGCGACCCGGCCTCCTGCTCAGTGGGGGACC +
Preference number: 2 (lower is better)
Translates to: MCLPAPRQTQSWNTG*SSFPATRPPAQWGT
Trigger: GGTCCCCCACTGAGCAGGAGGCCGGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCTGGTAAGCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp GCTTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCCACTCAAGAGCCAGCTaGGAAACTGAGCTCGCCACG +
Preference number: 2 (lower is better)
Translates to: ASLSSWAHSGIQALGLLGHSRAS*ETELAT
Trigger: CGTGGCGAGCTCAGTTTCTCAGCTGGCTCTTGAGTG...GCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCTCAGGGAGTTGGCCAGGGCCCAAAATTTCAGTCCTaGTGTGCTCTTGGTCTCCCT +
Preference number: 2 (lower is better)
Translates to: GDWAAPPRPWRSQGVGQGPKFQS*CALGLP
Trigger: AGGGAGACCAAGAGCACAGCAGGACTGAAATTTTGG...GCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTGCCACAGGAGGTCCTaGCAGTGCCAGACTGGCTTG +
Preference number: 2 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRCHRRS*QCQTGL
Trigger: CAAGCCAGTCTGGCACTGCCAGGACCTCCTGTGGCA...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR-3UTR CCA 90 bp TTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGTGGCACATCGGGCCCCACTCTaGGGAAGTACAATGCCTCCA +
Preference number: 2 (lower is better)
Translates to: LPSHDPGTASHEVRMQVAHRAPL*GSTMPP
Trigger: TGGAGGCATTGTACTTCCCCAGAGTGGGGCCCGATG...TGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTGGCAGAAGGACCCCTTaGAGTGGCCTCCATGGGTTC +
Preference number: 2 (lower is better)
Translates to: WHGAVCLPGDEGYQESWAGRRTP*SGLHGF
Trigger: GAACCCATGGAGGCCACTCCAAGGGGTCCTTCTGCC...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CAA 90 bp GGGCCGTTGTCTCCCTGTTCAACCTCAGGTGCACTGAGTCCCGCCTaGGTGGCTAGTTCTCCCACCTGTCTTACCTGCACTGGTGGTAGT +
Preference number: 2 (lower is better)
Translates to: GPLSPCSTSGALSPA*VASSPTCLTCTGGS
Trigger: ACTACCACCAGTGCAGGTAAGACAGGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTGCACCTGAGGTTGAACAGGGAGACAACGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACAGTGGCACACTCGTGTaGATTGGCACACATGCCGGT +
Preference number: 2 (lower is better)
Translates to: GGSGWSPPGLITERTCAYSGTLV*IGTHAG
Trigger: ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACT...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCAGCATCCAGCAGACTaGCCTGATCCACTGGAGACT +
Preference number: 2 (lower is better)
Translates to: GGSGWSPPGLITERTCAYQHPAD*PDPLET
Trigger: AGTCTCCAGTGGATCAGGGCAGTCTGCTGGATGCTG...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCCATTTTTCTCCTGCTaGCAAGGTGTGGGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: GGSGWSPPGLITERTCAYPFFSC*QGVGQV
Trigger: CACCTGGCCCACACCTTGGCAGCAGGAGAAAAATGG...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCGTTGGTGGATCAGGGTaGTCTGGCCTCCACGTTGCT +
Preference number: 2 (lower is better)
Translates to: APETWDSTWGKCQHAIQIVGGSG*SGLHVA
Trigger: AGCAACGTGGAGGCCAGAGCACCCTGATCCACCAAC...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp TGCCCTTTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGCCATGTGTGCCTGTGTaGAGGTACCAGTCTCTCCTC +
Preference number: 2 (lower is better)
Translates to: CPLPSHDPGTASHEVRMQPCVPV*RYQSLL
Trigger: GAGGAGAGACTGGTACCTCCACACAGGCACACATGG...CTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAAAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCAAGGAAGCTGACAGATaGGCGTGGCAGGGCCAGCAA +
Preference number: 2 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLKEADR*AWQGQQ
Trigger: TTGCTGGCCCTGCCACGCCCATCTGTCAGCTTCCTT...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGGCCAATATTGACAGATaGCTGTCACTCAAAACATAC +
Preference number: 2 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPANIDR*LSLKTY
Trigger: GTATGTTTTGAGTGACAGCCATCTGTCAATATTGGC...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CAA 90 bp GAAGACCCCACAAGCCAAGGAGCCCTCAGAACCTGCACTGTGCCATaGACTTGGGGTGTCCATGTTAGCAGCCAGCCACTGCCTAGATGC +
Preference number: 2 (lower is better)
Translates to: EDPTSQGALRTCTVP*TWGVHVSSQPLPRC
Trigger: GCATCTAGGCAGTGGCTGGCTGCTAACATGGACACCCCAAGTCAATGGCACAGTGCAGGTTCTGAGGGCTCCTTGGCTTGTGGGGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAAGCCAAGAGAGTCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQEAKRVT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGTGACTCTCTTGGC...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCTCCCCATTTTTCTCCTaGTGCCAAGGTGTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: APETWDSTWGKCQHAIQISPFFS*CQGVGQ
Trigger: CTGGCCCACACCTTGGCAGCAGGAGAAAAATGGGGA...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCCAGGGAGGGATGTGGTaGCAGCTACACCAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGQGGMW*QLHQEA
Trigger: GGCTTCCTGGTGTAGCTGGCACCACATCCCTCCCTG...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp CCACTTGGGGGAAGTGCCAACATGCCATCCAGATCCAAAAGGCTGGGATCACAGTGCCACAGGAGGTCCTaGCAGTGCCAGACTGGCTTG +
Preference number: 2 (lower is better)
Translates to: PLGGSANMPSRSKRLGSQCHRRS*QCQTGL
Trigger: CAAGCCAGTCTGGCACTGCCAGGACCTCCTGTGGCA...CTGTGATCCCAGCCTTTTGGATCTGGATGGCATGTTGGCACTTCCCCCAAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp AGCTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACGGGTGGAGGCAGAGTTaGGGTCTCGGAGGAGCAAGA +
Preference number: 2 (lower is better)
Translates to: SSETDPVMEYRFVLLPSDGWRQS*GLGGAR
Trigger: TCTTGCTCCTCCGAGACCCCAACTCTGCCTCCACCC...GTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCCAGGTGGCATGTTGGTaGATCAGGGTGCTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPQVACW*IRVLWP
Trigger: AGGCCAGAGCACCCTGATCCACCAACATGCCACCTG...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCAAAGTCAGAATGCAGGTaGCATGTTGGTGGATCAGGG +
Preference number: 2 (lower is better)
Translates to: GPLGVASMGSWSLQPSQAKSECR*HVGGSG
Trigger: CCCTGATCCACCAACATGCCACCTGCATTCTGACTT...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGGTAATCCCAGCACCCTaGGAGACTGAGGCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: LIWVSARLAMSPALAQAQVIPAP*ETEAGR
Trigger: TCTGCCAGCCTCAGTCTCCCAGGGTGCTGGGATTAC...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAACTCTCGAGACAAGAATaGGGCCTCAGCGGAGGCATA +
Preference number: 2 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKLSRQE*GLSGGI
Trigger: TATGCCTCCGCTGAGGCCTCATTCTTGTCTCGAGAG...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp AGCTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACTTGAGCACGGCTGGGTaGGTGTGCATAACCCAGCTC +
Preference number: 2 (lower is better)
Translates to: SSETDPVMEYRFVLLPSDLSTAG*VCITQL
Trigger: GAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAA...GTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGGCCAAGAGAGTCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: VLVVEAARDSESWEGEARAKRVT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGTGACTCTCTTGGC...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGGCAGCTTGAAGGGTaGCACAGGAGGTCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPEGQLEG*HRRSWQ
Trigger: CTGCCAGGACCTCCTGTGGCACCCTTCAAGCTGCCC...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR-3UTR GCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGCATGTGATGACAGTCTaGCCAGAGGGCCGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: GMLGLREEALLLFVEYRGHVMTV*PEGRLG
Trigger: GCCCAGCCGGCCCTCTGGGCAGACTGTCATCACATG...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR-3UTR GCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCACCTCCCAAGAACATaGTGGCTCCAAGCCATTCAT +
Preference number: 2 (lower is better)
Translates to: GGSGWSPPGLITERTCAYHLPRT*WLQAIH
Trigger: ATGAATGGCTTGGAGCCAGCATGTTCTTGGGAGGTG...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp GAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCAAGGTTGGGGATGCTTaGGTTAAGGGAGGAGGCTTT +
Preference number: 2 (lower is better)
Translates to: EGLDGAHQGSSQSGHVLTKVGDA*VKGGGF
Trigger: AAAGCCTCCTCCCTTAACCCAAGCATCCCCAACCTT...GGTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACACTGTGCCATTGACTTaGGGTGTCCATGTTAGCAGC +
Preference number: 2 (lower is better)
Translates to: GGSGWSPPGLITERTCAYTVPLT*GVHVSS
Trigger: GCTGCTAACATGGACACCCCAAGTCAATGGCACAGT...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGTGTCAGGGAGGGATGTaGTGCCAGCTACACCAGGAA +
Preference number: 2 (lower is better)
Translates to: LIWVSARLAMSPALAQAQCQGGM*CQLHQE
Trigger: TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACA...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp GGAAATTATCAAAGTCACGTCTCCTCCTCAAGTAAGAGCCAAAGTGAGGGCCAAGCCGGCTGGGCAGCTTaGAGGGTGCCACAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: GNYQSHVSSSSKSQSEGQAGWAA*RVPQEV
Trigger: GACCTCCTGTGGCACCCTTCAAGCTGCCCAGCCGGC...TTGGCCCTCACTTTGGCTCTTACTTGAGGAGGAGACGTGACTTTGATAATTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp GTGTGCCTGTGTGGAGGTACCAGTCTCTCCTCCTTTCACAGAGGGCCTTGGCAGAAGCTCTCCTTTCTCTaGACGGATGGCTTCTACCAC +
Preference number: 2 (lower is better)
Translates to: VCLCGGTSLSSFHRGPWQKLSFL*TDGFYH
Trigger: GTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTT...CTGCCAAGGCCCTCTGTGAAAGGAGGAGAGACTGGTACCTCCACACAGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp GAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCTGTTCTTCAGTATTGTaGACTCAGCTGGTATGGGGG +
Preference number: 2 (lower is better)
Translates to: EGLDGAHQGSSQSGHVLTCSSVL*TQLVWG
Trigger: CCCCCATACCAGCTGAGTTCACAATACTGAAGAACA...GGTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCAACACATGCCGGTTTATaGATGCATGTGATGACAGTC +
Preference number: 2 (lower is better)
Translates to: GPLGVASMGSWSLQPSQATHAGL*MHVMTV
Trigger: GACTGTCATCACATGCATGCATAAACCGGCATGTGT...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GCTTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCGTGCATTGGCACACATaGCGGTTTATGCATGCATGT +
Preference number: 2 (lower is better)
Translates to: ASLSSWAHSGIQALGLLGVHWHT*RFMHAC
Trigger: ACATGCATGCATAAACCGGCATGTGTGCCAATGCAC...GCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGCTACACCAGGAAGCCTaGTATGGCAAGACACTGCCA +
Preference number: 2 (lower is better)
Translates to: VLVVEAARDSESWEGEARLHQEA*YGKTLP
Trigger: TGGCAGTGTCTTGCCATAGCAGGCTTCCTGGTGTAG...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGGCCAAGGAATGGTGGTaGGTGGCACACTCGTGTGCA +
Preference number: 2 (lower is better)
Translates to: GMLGLREEALLLFVEYRGAKEWW*VAHSCA
Trigger: TGCACACGAGTGTGCCACTCACCACCATTCCTTGGC...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR-3UTR TCA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCCTTAAAGCTGTAGAATaGGGGGTCAGTGGTCACTCT +
Preference number: 2 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLLKAVE*GVSGHS
Trigger: AGAGTGACCACTGACCCCTCATTCTACAGCTTTAAG...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGCAGCTTGAAGGGTaGCACAGGAGGTCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: LGMLGLREEALLLFVEYRGQLEG*HRRSWQ
Trigger: CTGCCAGGACCTCCTGTGGCACCCTTCAAGCTGCCC...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR-3UTR GCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCCTACACCAGGAAGCCTaGTATGGCAAGACACTGCCA +
Preference number: 2 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGLHQEA*YGKTLP
Trigger: TGGCAGTGTCTTGCCATAGCAGGCTTCCTGGTGTAG...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTTCCCCACCTCATCTTaGAGAAGCTCCAGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGFPTSS*RSSRFR
Trigger: CCTGAACCTGGAGCTTCTGCAAGATGAGGTGGGGAA...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CAA 90 bp CCACCTCATCTTGCAGAAGCTCCAGGTTCAGGCTTCTGCACAGCTTaGTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: PPHLAEAPGSGFCTA*FLWLRQPGILRVGK
Trigger: CTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAACAAAGCTGTGCAGAAGCCTGAACCTGGAGCTTCTGCAAGATGAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp AGCTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACATGTCTTTCTCACTCTaGCCTCCTCTCCAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: SSETDPVMEYRFVLLPSDMSFSL*PPLQVL
Trigger: GAGGACTTGGAGAGGAGGGCAGAGTGAGAAAGACAT...GTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp GGAGCCAGGCTTAGCAAGGACTCAAGCACCTATAACCCCAGCCAGGGCAAAAGCTATTGTGAACTCAGCTaGTATGGGGGTGTCACAGAC +
Preference number: 2 (lower is better)
Translates to: GARLSKDSSTYNPSQGKSYCELS*YGGVTD
Trigger: GTCTGTGACACCCCCATACCAGCTGAGTTCACAATA...GCTTTTGCCCTGGCTGGGGTTATAGGTGCTTGAGTCCTTGCTAAGCCTGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp AATAGCAAAGTGCTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCAGGAGCCCACTGCACCTaGGCAGGGCCACAGGACCCG +
Preference number: 2 (lower is better)
Translates to: NSKVLYKCQVWEFSLSLSGAHCT*AGPQDP
Trigger: CGGGTCCTGTGGCCCTGCTCAGGTGCAGTGGGCTCC...TGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTTTGGGGAGGGTGGGTTaGCCCAAGCGCCGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFLGRVG*PKRRLS
Trigger: GGAGAGACGGCGCTTGGGCCAACCCACCCTCCCCAA...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTAATGTCCACAGGATCTaGGGAAATTATCAAAGTCAC +
Preference number: 2 (lower is better)
Translates to: WHGAVCLPGDEGYQESWANVHRI*GNYQSH
Trigger: GTGACTTTGATAATTTCCTCAGATCCTGTGGACATT...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR TCA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCAACGGAGAAATCAAGTaGGATGAAAGGGGTAAAAGT +
Preference number: 2 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLNGEIK*DERGKS
Trigger: ACTTTTACCCCTTTCATCTCACTTGATTTCTCCGTT...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCAAAATTAGTCAGGCGTaGTGGTGCATGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGKISQA*WCMPVI
Trigger: GATTACAGGCATGCACCACCACGCCTGACTAATTTT...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGACCACCTTGGGGAGGGTaGGTTGGCCCAAGCGCCGTC +
Preference number: 2 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRPPWGG*VGPSAV
Trigger: GACGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGG...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGGCAGCCAGGGATTCTaGGAGTTGGGAAGGGGAAGC +
Preference number: 2 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFGSQGF*ELGRGS
Trigger: GCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCC...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTCAGGGAGGGATGTGGTaGCAGCTACACCAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFQGGMW*QLHQEA
Trigger: GGCTTCCTGGTGTAGCTGGCACCACATCCCTCCCTG...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGATTGGGGAGGGTGGGTTaGCCCAAGCGCCGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRLGRVG*PKRRLS
Trigger: GGAGAGACGGCGCTTGGGCCAACCCACCCTCCCCAA...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCAAAAGATGCCAATATTaGCAGATGGCTGTCACTCAA +
Preference number: 2 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGKRCQY*QMAVTQ
Trigger: TTGAGTGACAGCCATCTGTCAATATTGGCATCTTTT...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp GAGGGTTTCCGGGAAAATACACAAACCCCACCTGTGCTGTCTGTGAAATATAGCAGTTTTGAGCACGGCTaGGTGAGTGTGCATAACCCA +
Preference number: 2 (lower is better)
Translates to: EGFRENTQTPPVLSVKYSSFEHG*VSVHNP
Trigger: TGGGTTATGCACACTCACCCAGCCGTGCTCAAAACT...GCTATATTTCACAGACAGCACAGGTGGGGTTTGTGTATTTTCCCGGAAACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTGTAATCCCAGCACCCTaGGAGACTGAGGCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFVIPAP*ETEAGR
Trigger: TCTGCCAGCCTCAGTCTCCCAGGGTGCTGGGATTAC...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCGCCAATATTGACAGATaGCTGTCACTCAAAACATAC +
Preference number: 2 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGANIDR*LSLKTY
Trigger: GTATGTTTTGAGTGACAGCCATCTGTCAATATTGGC...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTCAGGGATCAGCAGGCTaGTTTCCAGCTGGGTTAGCT +
Preference number: 2 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFQGSAG*FPAGLA
Trigger: AGCTAACCCAGCTGGAAAGCAGCCTGCTGATCCCTG...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp GAGGGTTTCCGGGAAAATACACAAACCCCACCTGTGCTGTCTGTGAAATATAGCCTTTCTCTGAACGGATaGCTTCTACCACCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: EGFRENTQTPPVLSVKYSLSLNG*LLPPVL
Trigger: AAGCACAGGTGGTAGAAGCCATCCGTTCAGAGAAAG...GCTATATTTCACAGACAGCACAGGTGGGGTTTGTGTATTTTCCCGGAAACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CCA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAACAGCCAGAAATCCAGTaGAAAACAATTCATTTTTAC +
Preference number: 2 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKQPEIQ*KTIHFY
Trigger: GTAAAAATGAATTGTTTTCCACTGGATTTCTGGCTG...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGAGTGAGCAGAGATCATaGCAGTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGSEQRS*QCTPAW
Trigger: CCAGGCTGGAGTGCACTGGCATGATCTCTGCTCACT...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGGTAGTCCCAGCTACTTaGGAGGCTGAGCCAAGAGAG +
Preference number: 2 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGVVPAT*EAEPRE
Trigger: CTCTCTTGGCTCAGCCTCCCAAGTAGCTGGGACTAC...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp AATAGCAAAGTGCTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCACTGTTCAACCTCAGGTaGACTGAGTCCCGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: NSKVLYKCQVWEFSLSLSLFNLR*TESRLG
Trigger: ACCAAGGCGGGACTCAGTGCACCTGAGGTTGAACAG...TGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGAAGTGAGCAGAGATCATaGCAGTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRSEQRS*QCTPAW
Trigger: CCAGGCTGGAGTGCACTGGCATGATCTCTGCTCACT...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTGCTATGGCAAGACACTaGCAAGTGAGGGAAATGAGG +
Preference number: 2 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFAMARH*QVREMR
Trigger: CCTCATTTCCCTCACTTGGCAGTGTCTTGCCATAGC...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTCCAGGTTCAGGCTTCTaGACAGCTTTGTTCTTGTGG +
Preference number: 2 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFPGSGF*TALFLW
Trigger: CCACAAGAACAAAGCTGTGCAGAAGCCTGAACCTGG...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp AATAGCAAAGTGCTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCATCCCAGGAAGCAAGATaGAATAGCCCCTCTCTCCCG +
Preference number: 2 (lower is better)
Translates to: NSKVLYKCQVWEFSLSLSSQEAR*NSPSLP
Trigger: CGGGAGAGAGGGGCTATTCCATCTTGCTTCCTGGGA...TGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGCCAGGTTCAGGCTTCTaGACAGCTTTGTTCTTGTGG +
Preference number: 2 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMPGSGF*TALFLW
Trigger: CCACAAGAACAAAGCTGTGCAGAAGCCTGAACCTGG...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGATTCCCCACCTCATCTTaGAGAAGCTCCAGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRFPTSS*RSSRFR
Trigger: CCTGAACCTGGAGCTTCTGCAAGATGAGGTGGGGAA...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGGACAGCTTTCTGTACTaGTATGGGTATCAGCCAGAC +
Preference number: 2 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGDSFLY*YGYQPD
Trigger: GTCTGGCTGATACCCATATCAGTACAGAAAGCTGTC...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTCTCAGCTGCTGTAACTaGCCCAAAACTCAGCTATTT +
Preference number: 2 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFLSCCN*PKTQLF
Trigger: AAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAG...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGACAGCTTTGTTCTTGTaGTTGAGGCAGCCAGGGATT +
Preference number: 2 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMTALFL*LRQPGI
Trigger: AATCCCTGGCTGCCTCAACCACAAGAACAAAGCTGT...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTCTTTCTGTACTGATATaGGTATCAGCCAGACTGGCT +
Preference number: 2 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFLSVLI*VSARLA
Trigger: AGCCAGTCTGGCTGATACCCATATCAGTACAGAAAG...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTCTTTCTGTACTGATATaGGTATCAGCCAGACTGGCT +
Preference number: 2 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFLSVLI*VSARLA
Trigger: AGCCAGTCTGGCTGATACCCATATCAGTACAGAAAG...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGTCCATCCCCACCAATTaGTATAGGTTTATGCCTGCA +
Preference number: 2 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMSIPTN*YRFMPA
Trigger: TGCAGGCATAAACCTATATCAATTGGTGGGGATGGA...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGAACAGCTTTGTTCTTGTaGTTGAGGCAGCCAGGGATT +
Preference number: 2 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRTALFL*LRQPGI
Trigger: AATCCCTGGCTGCCTCAACCACAAGAACAAAGCTGT...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGATCCATCCCCACCAATTaGTATAGGTTTATGCCTGCA +
Preference number: 2 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRSIPTN*YRFMPA
Trigger: TGCAGGCATAAACCTATATCAATTGGTGGGGATGGA...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGATACAGCATCCTTAATTaGATCACCTGGCCACCTACA +
Preference number: 2 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRYSILN*ITWPPT
Trigger: TGTAGGTGGCCAGGTGATTCAATTAAGGATGCTGTA...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR TCA 90 bp AATAGCAAAGTGCTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCATTTGCTTCTCTTTGTTaGGTATCGAGGGAGGCAAAA +
Preference number: 2 (lower is better)
Translates to: NSKVLYKCQVWEFSLSLSFASLC*VSREAK
Trigger: TTTTGCCTCCCTCGATACTCAACAAAGAGAAGCAAA...TGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR GCA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGGGCCCAATAGTTCTATaGATCTTTGATGTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMGPIVL*IFDVFS
Trigger: AGAGAAGACATCAAAGATGCATAGAACTATTGGGCC...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR GCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGAGGCCCAATAGTTCTATaGATCTTTGATGTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRGPIVL*IFDVFS
Trigger: AGAGAAGACATCAAAGATGCATAGAACTATTGGGCC...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR GCA 72 bp AGGGTGCTCTGGCCTCCACGTTGCTCCCAGGCCCCCTaGTCTGCCAGTGAGGTCCCTGCTGCCTTACGCCCA +
Preference number: 3 (lower is better)
Translates to: RVLWPPRCSQAP*SASEVPAALRP
Trigger: TGGGCGTAAGGCAGCAGGGACCTCACTGGCAGAGCAGGGGGCCTGGGAGCAACGTGGAGGCCAGAGCACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp TTGTCCTCCTTCCCAGCGACCCGGCCTCCTGCTCAGTaGGGGACCCGGTCAGGTCAGGCTGTATCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: LSSFPATRPPAQ*GTRSGQAVSPQ
Trigger: CTGGGGAGATACAGCCTGACCTGACCGGGTCCCCCACTGAGCAGGAGGCCGGGTCGCTGGGAAGGAGGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGAGCCAAGAGAGTCACTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPSQESH*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTGACTCTCTTGGCT...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CCA 72 bp GGTTGGGAGGGGCCCAGTGGTGTAGCCCAAGCTTCTTaGGCAGTGTGGGCAGAAGGACCCCTTGGAGTGGCC +
Preference number: 3 (lower is better)
Translates to: GWEGPSGVAQAS*AVWAEGPLGVA
Trigger: GGCCACTCCAAGGGGTCCTTCTGCCCACACTGCCCAAGAAGCTTGGGCTACACCACTGGGCCCCTCCCAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGGCTTTGTTCTTGTGGTaGAGGCAGCCAGGGATTCTG +
Preference number: 3 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPALFLW*RQPGIL
Trigger: CAGAATCCCTGGCTGCCTCAACCACAAGAACAAAGC...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR GCA 72 bp GCCAGGCTCCCGCCTTCACTTCCAGCTGGCACTGCCTaGCTTGGCATTCCTAGCCCAGCAGTTCACCTCCCA +
Preference number: 3 (lower is better)
Translates to: ARLPPSLPAGTA*LGIPSPAVHLP
Trigger: TGGGAGGTGAACTGCTGGGCTAGGAATGCCAAGGCAGGCAGTGCCAGCTGGAAGTGAAGGCGGGAGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp TACAGGTTTGTCCTCCTTCCCAGCGACCCGGCCTCCTaGTCAGTGGGGGACCCGGTCAGGTCAGGCTGTATC +
Preference number: 3 (lower is better)
Translates to: YRFVLLPSDPAS*SVGDPVRSGCI
Trigger: GATACAGCCTGACCTGACCGGGTCCCCCACTGAGCAGGAGGCCGGGTCGCTGGGAAGGAGGACAAACCTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp GGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTGGCCGGCTGGGCAGCTaGAAGGGTGCCACAGGAGGT +
Preference number: 3 (lower is better)
Translates to: GQGMVVSGTLVCIGTHAGGRLGS*KGATGG
Trigger: ACCTCCTGTGGCACCCTTCAAGCTGCCCAGCCGGCC...ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR-3UTR CAA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTCTGGCCTCCACGTaGCTCCCAGGCCCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKALAST*LPGPLL
Trigger: GAGCAGGGGGCCTGGGAGCAACGTGGAGGCCAGAGC...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACGCACTGAGTCCCGCCTaGGTGGCTAGTTCTCCCACC +
Preference number: 3 (lower is better)
Translates to: GGSGWSPPGLITERTCAYALSPA*VASSPT
Trigger: GGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTGC...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp GCTTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCACAGTCAGCGGGCCTTaGTCCTGGAGCTGGCACAGG +
Preference number: 3 (lower is better)
Translates to: ASLSSWAHSGIQALGLLGTVSGP*SWSWHR
Trigger: CCTGTGCCAGCTCCAGGACAAAGGCCCGCTGACTGT...GCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCCTTAGAGCCTGCCCTTaGCCCTCCCACGACCCTGGC +
Preference number: 3 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLLRACP*PSHDPG
Trigger: GCCAGGGTCGTGGGAGGGCAAAGGGCAGGCTCTAAG...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp CTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTaGGCTCAGAGCAGGTCAGCCCGTAGTGCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: LGLTVVSRLWGS*AQSRSARSAWS
Trigger: AGACCAGGCACTACGGGCTGACCTGCTCTGAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCAGCTCCTCCTCGCCCTaGGAGGTCTCAGGGAGTTGG +
Preference number: 3 (lower is better)
Translates to: APETWDSTWGKCQHAIQISSSSP*EVSGSW
Trigger: CCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCT...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 72 bp AGGGGCCGTTGTCTCCCTGTTCAACCTCAGGTGCACTaGGTCCCGCCTTGGTGGCTAGTTCTCCCACCTGTC +
Preference number: 3 (lower is better)
Translates to: RGRCLPVQPQVH*VPPWWLVLPPV
Trigger: GACAGGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTGCACCTGAGGTTGAACAGGGAGACAACGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp CAAGAGCCAGCTGAGAAACTGAGCTCGCCACGTCACTaGCAGGCACCAGGAAGCTGTTGCCCTCCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: QEPAEKLSSPRH*QAPGSCCPPPL
Trigger: CAGAGGAGGAGGGCAACAGCTTCCTGGTGCCTGGCAGTGACGTGGCGAGCTCAGTTTCTCAGCTGGCTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp AAGTCAGAATGCAGGTGGCATGTTGGTGGATCAGGGTaGTCTGGCCTCCACGTTGCTCCCAGGCCCCCTGCT +
Preference number: 3 (lower is better)
Translates to: KSECRWHVGGSG*SGLHVAPRPPA
Trigger: AGCAGGGGGCCTGGGAGCAACGTGGAGGCCAGAGCACCCTGATCCACCAACATGCCACCTGCATTCTGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp GCATCCTGTCCATTAGACTCCCTCACTCTAGCTGCCTaGAGGAGGACATGCAGGCCCAGTCTGCCAGCGCAG +
Preference number: 3 (lower is better)
Translates to: ASCPLDSLTLAA*RRTCRPSLPAQ
Trigger: CTGCGCTGGCAGACTGGGCCTGCATGTCCTCCTGCAGGCAGCTAGAGTGAGGGAGTCTAATGGACAGGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp TGGGGCATCCTGTCCATTAGACTCCCTCACTCTAGCTaGCTGCAGGAGGACATGCAGGCCCAGTCTGCCAGC +
Preference number: 3 (lower is better)
Translates to: WGILSIRLPHSS*LQEDMQAQSAS
Trigger: GCTGGCAGACTGGGCCTGCATGTCCTCCTGCAGGCAGCTAGAGTGAGGGAGTCTAATGGACAGGATGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp CTTCTTGGGCAGTGTGGGCAGAAGGACCCCTTGGAGTaGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: LLGQCGQKDPLE*PPWVPGLSSLL
Trigger: GAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCCTTCTGCCCACACTGCCCAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp AGGCAGGCAGGGGCATCCATGAGCAACGGGGGCACTTaGGGCATCCTGTCCATTAGACTCCCTCACTCTAGC +
Preference number: 3 (lower is better)
Translates to: RQAGASMSNGGT*GILSIRLPHSS
Trigger: GCTAGAGTGAGGGAGTCTAATGGACAGGATGCCCCAAGTGCCCCCGTTGCTCATGGATGCCCCTGCCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTCACAGGGAGGGGCCGTaGTCTCCCTGTTCAACCTCA +
Preference number: 3 (lower is better)
Translates to: WHGAVCLPGDEGYQESWAHREGP*SPCSTS
Trigger: TGAGGTTGAACAGGGAGACAACGGCCCCTCCCTGTG...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAATGGGTGGAGGCAGAGTaGGGGTCTCGGAGGAGCAAG +
Preference number: 3 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKWVEAE*GSRRSK
Trigger: CTTGCTCCTCCGAGACCCCAACTCTGCCTCCACCCA...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 72 bp GGCTTATCTAGACCAGGGGACAGGACTATGTGCTCATaGGAGGCAGGCAGGGGCATCCATGAGCAACGGGGG +
Preference number: 3 (lower is better)
Translates to: GLSRPGDRTMCS*EAGRGIHEQRG
Trigger: CCCCCGTTGCTCATGGATGCCCCTGCCTGCCTCTCATGAGCACATAGTCCTGTCCCCTGGTCTAGATAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp CCCTGCAAGGTCTTCATCCTGAACAAGAGAGGCATGTaGAACAGGAACCCCCAGCCTGGTCCAGGGGCTGTG +
Preference number: 3 (lower is better)
Translates to: PCKVFILNKRGM*NRNPQPGPGAV
Trigger: CACAGCCCCTGGACCAGGCTGGGGGTTCCTGTTGCACATGCCTCTCTTGTTCAGGATGAAGACCTTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp CCAAGGGCTTCCCGAAAGAAGTCACTTCCTCCTGGGTaGCATCGGGCCCCACTCTGGGGAAGTACAATGCCT +
Preference number: 3 (lower is better)
Translates to: PRASRKKSLPPG*HRAPLWGSTMP
Trigger: AGGCATTGTACTTCCCCAGAGTGGGGCCCGATGCCACCCAGGAGGAAGTGACTTCTTTCGGGAAGCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp GCCAGCCATGAAGTCAGAATGCAGGTGGCATGTTGGTaGATCAGGGTGCTCTGGCCTCCACGTTGCTCCCAG +
Preference number: 3 (lower is better)
Translates to: ASHEVRMQVACW*IRVLWPPRCSQ
Trigger: CTGGGAGCAACGTGGAGGCCAGAGCACCCTGATCCACCAACATGCCACCTGCATTCTGACTTCATGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp ACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGTaGCATGTTGGTGGATCAGGGTGCTCTGGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: TLALPAMKSECR*HVGGSGCSGLH
Trigger: GTGGAGGCCAGAGCACCCTGATCCACCAACATGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp CTCCAGCCTTCTCAGGCAGCCAAAGCCCCTGAGACATaGGACTCCACTTGGGGGAAGTGCCAACATGCCATC +
Preference number: 3 (lower is better)
Translates to: LQPSQAAKAPET*DSTWGKCQHAI
Trigger: GATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGCTTTGGCTGCCTGAGAAGGCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCAACCTGCACTGTGCCATaGACTTGGGGTGTCCATGTT +
Preference number: 3 (lower is better)
Translates to: GPLGVASMGSWSLQPSQATCTVP*TWGVHV
Trigger: AACATGGACACCCCAAGTCAATGGCACAGTGCAGGT...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp TGCCCTTTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGCACACTCGTGTGCATaGGCACACATGCCGGTTTAT +
Preference number: 3 (lower is better)
Translates to: CPLPSHDPGTASHEVRMQAHSCA*AHMPVY
Trigger: ATAAACCGGCATGTGTGCCAATGCACACGAGTGTGC...CTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAAAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCAAGGCTTTGCTTCTCTTaGTTGAGTATCGAGGGAGGC +
Preference number: 3 (lower is better)
Translates to: GPLGVASMGSWSLQPSQARLCFS*LSIEGG
Trigger: GCCTCCCTCGATACTCAACAAAGAGAAGCAAAGCCT...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 72 bp ATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTaGGTGGCACACTCGTGTGCATTGGCACACATGCCG +
Preference number: 3 (lower is better)
Translates to: IEGGKRLAKEWW*VAHSCALAHMP
Trigger: CGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR TCA 72 bp CAGTCAAAAATCCTTCCAGCATCCAGCAGACTGCCCTaGTCCACTGGAGACTGGGCAGCTCCTCCTCGCCCT +
Preference number: 3 (lower is better)
Translates to: QSKILPASSRLP*STGDWAAPPRP
Trigger: AGGGCGAGGAGGAGCTGCCCAGTCTCCAGTGGATCAGGGCAGTCTGCTGGATGCTGGAAGGATTTTTGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp GGGGCTCAGGTCAGTTTGGCTTCTCAGCCGGGCCTCTaGAGTCAAAAATCCTTCCAGCATCCAGCAGACTGC +
Preference number: 3 (lower is better)
Translates to: GAQVSLASQPGL*SQKSFQHPADC
Trigger: GCAGTCTGCTGGATGCTGGAAGGATTTTTGACTGCAGAGGCCCGGCTGAGAAGCCAAACTGACCTGAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp TTAGACTCCCTCACTCTAGCTGCCTGCAGGAGGACATaGAGGCCCAGTCTGCCAGCGCAGCTGACTTTTGCA +
Preference number: 3 (lower is better)
Translates to: LDSLTLAACRRT*RPSLPAQLTFA
Trigger: TGCAAAAGTCAGCTGCGCTGGCAGACTGGGCCTGCATGTCCTCCTGCAGGCAGCTAGAGTGAGGGAGTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTaGCAGCTACACCAGGAAGCCTGCTATGGCAAGACA +
Preference number: 3 (lower is better)
Translates to: GNKEAVCQGGMW*QLHQEACYGKT
Trigger: TGTCTTGCCATAGCAGGCTTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CCA 72 bp ACTGCCAGCCATGAAGTCAGAATGCAGGTGGCATGTTaGTGGATCAGGGTGCTCTGGCCTCCACGTTGCTCC +
Preference number: 3 (lower is better)
Translates to: TASHEVRMQVAC*WIRVLWPPRCS
Trigger: GGAGCAACGTGGAGGCCAGAGCACCCTGATCCACCAACATGCCACCTGCATTCTGACTTCATGGCTGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGCCGGCTGGGCAGCTaGAAGGGTGCCACAGGAGGT +
Preference number: 3 (lower is better)
Translates to: LGMLGLREEALLLFVEYRGRLGS*KGATGG
Trigger: ACCTCCTGTGGCACCCTTCAAGCTGCCCAGCCGGCC...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR-3UTR CAA 90 bp TTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGTGGCAAAGTCCTCAACAAGGTaGGGGATGCTTGGGTTAAGG +
Preference number: 3 (lower is better)
Translates to: LPSHDPGTASHEVRMQVAKSSTR*GMLGLR
Trigger: CCTTAACCCAAGCATCCCCAACCTTGTTGAGGACTT...TGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 72 bp AGTCACCAAAGCTCACTCAAGAGCCAGCTGAGAAACTaGGCTCGCCACGTCACTGCCAGGCACCAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: SHQSSLKSQLRN*ARHVTARHQEA
Trigger: AGCTTCCTGGTGCCTGGCAGTGACGTGGCGAGCTCAGTTTCTCAGCTGGCTCTTGAGTGAGCTTTGGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 72 bp AGGGTCAGCAACTCTAGGTTTAGGGAGAAAGGAAGCTaGCAGATGGGCGTGGCAGGGCCAGCAAAGTGGCCA +
Preference number: 3 (lower is better)
Translates to: RVSNSRFREKGS*QMGVAGPAKWP
Trigger: TGGCCACTTTGCTGGCCCTGCCACGCCCATCTGTCAGCTTCCTTTCTCCCTAAACCTAGAGTTGCTGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp ATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTaGTTACCAGCTCCGAGACAGACCCAGTCATGGAAT +
Preference number: 3 (lower is better)
Translates to: MEPTRAHHRADM*LPAPRQTQSWN
Trigger: ATTCCATGACTGGGTCTGTCTCGGAGCTGGTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp CAGGGAGGGATGTGGTGCCAGCTACACCAGGAAGCCTaGTATGGCAAGACACTGCCAAGTGAGGGAAATGAG +
Preference number: 3 (lower is better)
Translates to: QGGMWCQLHQEA*YGKTLPSEGNE
Trigger: CTCATTTCCCTCACTTGGCAGTGTCTTGCCATAGCAGGCTTCCTGGTGTAGCTGGCACCACATCCCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CCA 72 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTaGCACACTCGTGTGCATTGGCACACATGCCGGTTT +
Preference number: 3 (lower is better)
Translates to: REAKGWPRNGGE*HTRVHWHTCRF
Trigger: AAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR-3UTR CAA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCGTGTGGGCCAGGTGCTaGGGTCAGCAATGTCATTTT +
Preference number: 3 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPVWARC*GQQCHF
Trigger: AAAATGACATTGCTGACCCAAGCACCTGGCCCACAC...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCCTCTTAGGTGTGACTTaGAGCACAGCTCTCCATCTC +
Preference number: 3 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLLLGVT*STALHL
Trigger: GAGATGGAGAGCTGTGCTCAAAGTCACACCTAAGAG...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGGGCTTCTGCACAGCTTaGTTCTTGTGGTTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: LIWVSARLAMSPALAQAQGFCTA*FLWLRQ
Trigger: CTGCCTCAACCACAAGAACAAAGCTGTGCAGAAGCC...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR GCA 72 bp GGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATaGCGGTTTATGCATGCATGTGATGACAGTCTGCCC +
Preference number: 3 (lower is better)
Translates to: GGEWHTRVHWHT*RFMHACDDSLP
Trigger: GGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
3UTR GCA 72 bp CCACCTCATCTTGCAGAAGCTCCAGGTTCAGGCTTCTaGACAGCTTTGTTCTTGTGGTTGAGGCAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: PPHLAEAPGSGF*TALFLWLRQPG
Trigger: CCCTGGCTGCCTCAACCACAAGAACAAAGCTGTGCAGAAGCCTGAACCTGGAGCTTCTGCAAGATGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR GCA 72 bp GATCCAAAAGGCTGGGATCACAGCCTGGGAAGGAACTaGTTCCCTGAGTTCTTGGGCTCACAGTGGTATCCA +
Preference number: 3 (lower is better)
Translates to: DPKGWDHSLGRN*FPEFLGSQWYP
Trigger: TGGATACCACTGTGAGCCCAAGAACTCAGGGAAGCAGTTCCTTCCCAGGCTGTGATCCCAGCCTTTTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp GGGCAGAAAATCTACAAAAACATCACAAGGAGGGTCTaGATGGAGCCCACCAGGGCTCATCACAGAGCGGAC +
Preference number: 3 (lower is better)
Translates to: GQKIYKNITRRV*MEPTRAHHRAD
Trigger: GTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCCTTGTGATGTTTTTGTAGATTTTCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp CAATCAAAATTCATCTGTAGGTTGGGAGGGGCCCAGTaGTGTAGCCCAAGCTTCTTGGGCAGTGTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: QSKFICRLGGAQ*CSPSFLGSVGR
Trigger: TCTGCCCACACTGCCCAAGAAGCTTGGGCTACACCACTGGGCCCCTCCCAACCTACAGATGAATTTTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp GTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTaGGCTTATCTAGACCAGGGGACAGGACTATGTGCT +
Preference number: 3 (lower is better)
Translates to: VCLPGDEGYQES*AYLDQGTGLCA
Trigger: AGCACATAGTCCTGTCCCCTGGTCTAGATAAGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp GAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCTTAAGGGAGGAGGCTTaGCTTCTCTTTGTTGAGTAT +
Preference number: 3 (lower is better)
Translates to: EGLDGAHQGSSQSGHVLTLREEA*LLFVEY
Trigger: ATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAA...GGTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGAGGCAGGGGACCACCTaGGGGAGGGTGGGTTGGCCC +
Preference number: 3 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGRQGTT*GRVGWP
Trigger: GGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCT...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR GCA 72 bp CTTTCCAGCTGGGTTAGCTCATTCCCCACCTCATCTTaGAGAAGCTCCAGGTTCAGGCTTCTGCACAGCTTT +
Preference number: 3 (lower is better)
Translates to: LSSWVSSFPTSS*RSSRFRLLHSF
Trigger: AAAGCTGTGCAGAAGCCTGAACCTGGAGCTTCTGCAAGATGAGGTGGGGAATGAGCTAACCCAGCTGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CCA 72 bp TGTCTTACCTGCACTGGTGGTAGTTTTGAGCACGGCTaGGTGAGTGTGCATAACCCAGCTCTCGAGACAAGA +
Preference number: 3 (lower is better)
Translates to: CLTCTGGSFEHG*VSVHNPALETR
Trigger: TCTTGTCTCGAGAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCAGGTAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCTCAGCGGAGGCATATTaGAAAAGCCAAATCAAGGAC +
Preference number: 3 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPSAEAY*KSQIKD
Trigger: GTCCTTGATTTGGCTTTTCAAATATGCCTCCGCTGA...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 72 bp TTATTGTCTTTCTCACCCACTAGGATGTCAGCCCCATaGGGCAGAGACTTGGTCCTGTTCCTTGCTGCACCA +
Preference number: 3 (lower is better)
Translates to: LLSFSPTRMSAP*GRDLVLFLAAP
Trigger: TGGTGCAGCAAGGAACAGGACCAAGTCTCTGCCTCATGGGGCTGACATCCTAGTGGGTGAGAAAGACAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR TCA 72 bp CTAGTGCATGAAGTGGGTGAGGACAGCTTTCTGTACTaGTATGGGTATCAGCCAGACTGGCTATGTCCCCAG +
Preference number: 3 (lower is better)
Translates to: LVHEVGEDSFLY*YGYQPDWLCPQ
Trigger: CTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACAGAAAGCTGTCCTCACCCACTTCATGCACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR GCA 72 bp GCCAGCTACACCAGGAAGCCTGCTATGGCAAGACACTaGCAAGTGAGGGAAATGAGGATGGGTAAACAGTAT +
Preference number: 3 (lower is better)
Translates to: ASYTRKPAMARH*QVREMRMGKQY
Trigger: ATACTGTTTACCCATCCTCATTTCCCTCACTTGGCAGTGTCTTGCCATAGCAGGCTTCCTGGTGTAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CCA 72 bp ACTCAAGCACAGAAAGCTCTCCTTTCTCTGAACGGATaGCTTCTACCACCTGTGCTTTCTCCCCATCTCTGG +
Preference number: 3 (lower is better)
Translates to: TQAQKALLSLNG*LLPPVLSPHLW
Trigger: CCAGAGATGGGGAGAAAGCACAGGTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTTTCTGTGCTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp GGTCCTGTTCCTTGCTGCACCAAGCACCCAGGATGCTaGCTGGTGCTCAATAAGAGATCCCTAAATAATCAT +
Preference number: 3 (lower is better)
Translates to: GPVPCCTKHPGC*LVLNKRSLNNH
Trigger: ATGATTATTTAGGGATCTCTTATTGAGCACCAGGCAGCATCCTGGGTGCTTGGTGCAGCAAGGAACAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR GCA 72 bp CTTGGTCCTGTTCCTTGCTGCACCAAGCACCCAGGATaGTGCCTGGTGCTCAATAAGAGATCCCTAAATAAT +
Preference number: 3 (lower is better)
Translates to: LGPVPCCTKHPG*CLVLNKRSLNN
Trigger: ATTATTTAGGGATCTCTTATTGAGCACCAGGCAGCATCCTGGGTGCTTGGTGCAGCAAGGAACAGGACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp AGAAAATCTACAAAAACATCACAAGGAGGGTCTGGATaGAGCCCACCAGGGCTCATCACAGAGCGGACATGT +
Preference number: 3 (lower is better)
Translates to: RKSTKTSQGGSG*SPPGLITERTC
Trigger: ACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCCTTGTGATGTTTTTGTAGATTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CCA 72 bp AACACAAATGAGAGCAATCAAAATTCATCTGTAGGTTaGGAGGGGCCCAGTGGTGTAGCCCAAGCTTCTTGG +
Preference number: 3 (lower is better)
Translates to: NTNESNQNSSVG*EGPSGVAQASW
Trigger: CCAAGAAGCTTGGGCTACACCACTGGGCCCCTCCCAACCTACAGATGAATTTTGATTGCTCTCATTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp GAGGGTTTCCGGGAAAATACACAAACCCCACCTGTGCTGTCTGTGAAATATAGCCTGAAATTTCCTGTGTaGGTGAAGGGTCAGCAACTC +
Preference number: 3 (lower is better)
Translates to: EGFRENTQTPPVLSVKYSLKFPV*VKGQQL
Trigger: GAGTTGCTGACCCTTCACCAACACAGGAAATTTCAG...GCTATATTTCACAGACAGCACAGGTGGGGTTTGTGTATTTTCCCGGAAACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTTGCACAGCTTTGTTCTaGTGGTTGAGGCAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFCTALF*WLRQPG
Trigger: CCCTGGCTGCCTCAACCACAAGAACAAAGCTGTGCA...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CAA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGAGCCAAGAGAGTCACTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGSQESH*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTGACTCTCTTGGCT...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR TCA 72 bp ACAGCATCCTTAATTGAATCACCTGGCCACCTACATTaGCAGATGCTCAGCTGCTGTAACTGCCCCAAAACT +
Preference number: 3 (lower is better)
Translates to: TASLIESPGHLH*QMLSCCNCPKT
Trigger: AGTTTTGGGGCAGTTACAGCAGCTGAGCATCTGTCAATGTAGGTGGCCAGGTGATTCAATTAAGGATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR-3UTR CAA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGGGCTTCTGCACAGCTTaGTTCTTGTGGTTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMGFCTA*FLWLRQ
Trigger: CTGCCTCAACCACAAGAACAAAGCTGTGCAGAAGCC...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR TCA 72 bp TGCCAGGTGTGGGAATTCTCGTTGTCATTATCATTATaGGTAAGACACTTTTGCCAGAGCAGAAGAAGGGGG +
Preference number: 3 (lower is better)
Translates to: CQVWEFSLSLSL*VRHFCQSRRRG
Trigger: CCCCCTTCTTCTGCTCTGGCAAAAGTGTCTTACTCATAATGATAATGACAACGAGAATTCCCACACCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR-3UTR CAA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTCAAAAGATGCCAATATaGACAGATGGCTGTCACTCA +
Preference number: 3 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFQKMPI*TDGCHS
Trigger: TGAGTGACAGCCATCTGTCAATATTGGCATCTTTTG...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR TCA 72 bp GATGTCTTCTCTCATTTAACCTCCATCCCCACCAATTaGTATAGGTTTATGCCTGCAGTAAATGGGATAGTT +
Preference number: 3 (lower is better)
Translates to: DVFSHLTSIPTN*YRFMPAVNGIV
Trigger: AACTATCCCATTTACTGCAGGCATAAACCTATATCAATTGGTGGGGATGGAGGTTAAATGAGAGAAGACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGGCCCGGGCCAGGGTGTaGGTGAGGGCGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPARARV*VRAAED
Trigger: GTCCTCTGCCGCCCTCACCCACACCCTGGCCCGGGC...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGTTGGTGAGGCTGCCCTaGCTGGCAGGGGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPLVRLP*LAGAHS
Trigger: GCTGTGGGCCCCTGCCAGGCAGGGCAGCCTCACCAA...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGCCACCTTGGGGAGGGTaGGTTGGCCCAAGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPPPWGG*VGPSAV
Trigger: GACGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGG...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGTGCCAGGTGAGTACTTaGTGGGCCGGCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPCQVST*WAGRSW
Trigger: CCAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCA...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGCAGGGAGGGATGTGGTaGCAGCTACACCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPQGGMW*QLHQEA
Trigger: GGCTTCCTGGTGTAGCTGGCACCACATCCCTCCCTG...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GCTTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCCCGCACACGCCCCACTaGCAGGCCTGCCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ASLSSWAHSGIQALGLLGPHTPH*QACRLS
Trigger: GGAGAGCCGGCAGGCCTGGCAGTGGGGCGTGTGCGG...GCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGGTAATCCCAGCACCCTaGGAGACTGAGGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPVIPAP*ETEAGR
Trigger: TCTGCCAGCCTCAGTCTCCCAGGGTGCTGGGATTAC...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGCCTGGCCACCTACATTaGCAGATGCTCAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPPGHLH*QMLSCC
Trigger: ACAGCAGCTGAGCATCTGTCAATGTAGGTGGCCAGG...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GCTTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCAGCGACCCGGCCTCCTaGTCAGTGGGGGACCCGGTC +
Preference number: 4 (lower is better)
Translates to: ASLSSWAHSGIQALGLLGSDPAS*SVGDPV
Trigger: GACCGGGTCCCCCACTGAGCAGGAGGCCGGGTCGCT...GCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAAGCCCGGGCCAGGGTGTaGGTGAGGGCGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQEARARV*VRAAED
Trigger: GTCCTCTGCCGCCCTCACCCACACCCTGGCCCGGGC...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCTCAGGGAGTTGGCCAGGGCCAAGGAGGGTCTGGATaGAGCCCACCAGGGCTCATC +
Preference number: 4 (lower is better)
Translates to: GDWAAPPRPWRSQGVGQGQGGSG*SPPGLI
Trigger: GATGAGCCCTGGTGGGCTCCATCCAGACCCTCCTTG...GCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCTCAGGGAGTTGGCCAGGGCGGCAGAAGGACCCCTTaGAGTGGCCTCCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: GDWAAPPRPWRSQGVGQGGRRTP*SGLHGF
Trigger: GAACCCATGGAGGCCACTCCAAGGGGTCCTTCTGCC...GCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGGTAGTCCCAGCTACTTaGGAGGCTGAGCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPVVPAT*EAEPRE
Trigger: CTCTCTTGGCTCAGCCTCCCAAGTAGCTGGGACTAC...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGCCGCACACGCCCCACTaGCAGGCCTGCCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LIWVSARLAMSPALAQAQPHTPH*QACRLS
Trigger: GGAGAGCCGGCAGGCCTGGCAGTGGGGCGTGTGCGG...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCTCAGGGAGTTGGCCAGGGCCTCCCTCACTCTAGCTaGCTGCAGGAGGACATGCAG +
Preference number: 4 (lower is better)
Translates to: GDWAAPPRPWRSQGVGQGLPHSS*LQEDMQ
Trigger: CTGCATGTCCTCCTGCAGGCAGCTAGAGTGAGGGAG...GCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATGCCCGGGCCAGGGTGTaGGTGAGGGCGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHARARV*VRAAED
Trigger: GTCCTCTGCCGCCCTCACCCACACCCTGGCCCGGGC...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp TGCCCTTTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGCCCACGTGGGTATTGTaGGCGTCTGCCCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: CPLPSHDPGTASHEVRMQPTWVL*ASARAR
Trigger: GCGGGCACGGGCAGACGCCCACAATACCCACGTGGG...CTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAAAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCTCAGGGAGTTGGCCAGGGCGCCAGACTGGCTTGCTaGGCAGTAGGCCTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GDWAAPPRPWRSQGVGQGARLAC*AVGLVL
Trigger: AAGCACTAGGCCTACTGCCCAGCAAGCCAGTCTGGC...GCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCTCAGGGAGTTGGCCAGGGCCATCGGGCCCCACTCTaGGGAAGTACAATGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GDWAAPPRPWRSQGVGQGHRAPL*GSTMPP
Trigger: TGGAGGCATTGTACTTCCCCAGAGTGGGGCCCGATG...GCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCTCAGGGAGTTGGCCAGGGCATCACAAGGAGGGTCTaGATGGAGCCCACCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GDWAAPPRPWRSQGVGQGITRRV*MEPTRA
Trigger: AGCCCTGGTGGGCTCCATCCAGACCCTCCTTGTGAT...GCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CAA 72 bp AGGTTGGGAGGGGCCCAGTGGTGTAGCCCAAGCTTCTaGGGCAGTGTGGGCAGAAGGACCCCTTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RLGGAQWCSPSF*GSVGRRTPWSG
Trigger: GCCACTCCAAGGGGTCCTTCTGCCCACACTGCCCAAGAAGCTTGGGCTACACCACTGGGCCCCTCCCAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGGAGCCCACTGCACCTaGGCAGGGCCACAGGACCCG +
Preference number: 4 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKGAHCT*AGPQDP
Trigger: CGGGTCCTGTGGCCCTGCTCAGGTGCAGTGGGCTCC...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCTCCCTCCGGCAGAGCTaGTTCTGCCGCCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLSLRQS*FCRRDS
Trigger: GCTGTCCCGGCGGCAGAAGCAGCTCTGCCGGAGGGA...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAATCCCTCCGGCAGAGCTaGTTCTGCCGCCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQESLRQS*FCRRDS
Trigger: GCTGTCCCGGCGGCAGAAGCAGCTCTGCCGGAGGGA...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAATTGGTGAGGCTGCCCTaGCTGGCAGGGGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQELVRLP*LAGAHS
Trigger: GCTGTGGGCCCCTGCCAGGCAGGGCAGCCTCACCAA...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGCCAGGTTCAGGCTTCTaGACAGCTTTGTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPPGSGF*TALFLW
Trigger: CCACAAGAACAAAGCTGTGCAGAAGCCTGAACCTGG...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp CCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTGCCCGGGCCAGGGTGTaGGTGAGGGCGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: PRNGGEWHTRVHWHTCRFARARV*VRAAED
Trigger: GTCCTCTGCCGCCCTCACCCACACCCTGGCCCGGGC...AAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGACAGGCTGCTGCAGCTaGCCTCCCGGGAGCACACCC +
Preference number: 4 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRTGCCS*PPGSTP
Trigger: GGGTGTGCTCCCGGGAGGCCAGCTGCAGCAGCCTGT...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR TCA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCATCCAGCAGACTGCCCTaGTCCACTGGAGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: GPLGVASMGSWSLQPSQASSRLP*STGDWA
Trigger: TGCCCAGTCTCCAGTGGATCAGGGCAGTCTGCTGGA...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCAGGCAGGGGCATCCATaGGCAACGGGGGCACTTGGG +
Preference number: 4 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLRQGHP*ATGALG
Trigger: CCCAAGTGCCCCCGTTGCTCATGGATGCCCCTGCCT...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGGACAGCTTTCTGTACTaGTATGGGTATCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPDSFLY*YGYQPD
Trigger: GTCTGGCTGATACCCATATCAGTACAGAAAGCTGTC...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTCCCTCCGGCAGAGCTaGTTCTGCCGCCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHSLRQS*FCRRDS
Trigger: GCTGTCCCGGCGGCAGAAGCAGCTCTGCCGGAGGGA...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp GGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTGTGGGCGTCTGCCCGTaGCCGCAGGTCCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GQGMVVSGTLVCIGTHAGVGVCP*PQVLVS
Trigger: GGAAACAAGGACCTGCGGGCACGGGCAGACGCCCAC...ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp GCACTGAGTCCCGCCTTGGTGGCTAGTTCTCCCACCTGTCTTACCTGCACTGGTCGGAACGGGGAGAGCTaGTTCCAGCAGGTGCGCACG +
Preference number: 4 (lower is better)
Translates to: ALSPALVASSPTCLTCTGRNGES*FQQVRT
Trigger: CGTGCGCACCTGCTGGAAGCAGCTCTCCCCGTTCCG...ACCAGTGCAGGTAAGACAGGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GCTTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCGGGCAGCTTGAAGGGTaGCACAGGAGGTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ASLSSWAHSGIQALGLLGGQLEG*HRRSWQ
Trigger: CTGCCAGGACCTCCTGTGGCACCCTTCAAGCTGCCC...GCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCATGTGATGACAGTCTaGCCAGAGGGCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGSGWSPPGLITERTCAYHVMTV*PEGRLG
Trigger: GCCCAGCCGGCCCTCTGGGCAGACTGTCATCACATG...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCCTCTGGCCTCCACGTTaGTCCCAGGCCCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLLWPPR*SQAPCS
Trigger: AGAGCAGGGGGCCTGGGAGCAACGTGGAGGCCAGAG...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGCCCACGTGGGTATTGTaGGCGTCTGCCCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: VLVVEAARDSESWEGEARPTWVL*ASARAR
Trigger: GCGGGCACGGGCAGACGCCCACAATACCCACGTGGG...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTCAGGAACCCCCAGCCTaGTCCAGGGGCTGTGCATCC +
Preference number: 4 (lower is better)
Translates to: WHGAVCLPGDEGYQESWAQEPPA*SRGCAS
Trigger: GGATGCACAGCCCCTGGACCAGGCTGGGGGTTCCTG...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCAGCGGGCCTTTGTCCTaGAGCTGGCACAGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: EGLDGAHQGSSQSGHVLTSGPLS*SWHRRG
Trigger: ACCTCGCCTGTGCCAGCTCCAGGACAAAGGCCCGCT...GGTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCCGGCCTCCTGCTCAGTaGGGGACCCGGTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPRPPAQ*GTRSGQ
Trigger: CTGACCTGACCGGGTCCCCCACTGAGCAGGAGGCCG...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGGGCAGGGGACCACCTTaGGGAGGGTGGGTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LIWVSARLAMSPALAQAQGRGPP*GGWVGP
Trigger: TGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCC...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CAA 72 bp CCCAAGCTTCTTGGGCAGTGTGGGCAGAAGGACCCCTaGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PKLLGQCGQKDP*EWPPWVPGLSS
Trigger: GCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCCTTCTGCCCACACTGCCCAAGAAGCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTGCCACAGGACCCGATTaGCCCATCTCAGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: WHGAVCLPGDEGYQESWAATGPD*PISARL
Trigger: GAGCCTGGCTGAGATGGGTCAATCGGGTCCTGTGGC...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTGGTATTGTGGGCGTCTaGCCGTGCCCGCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GQGMVVSGTLVCIGTHAGGIVGV*PCPQVL
Trigger: AAGGACCTGCGGGCACGGGCAGACGCCCACAATACC...ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAAGGTATTGTGGGCGTCTaGCCGTGCCCGCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQEGIVGV*PCPQVL
Trigger: AAGGACCTGCGGGCACGGGCAGACGCCCACAATACC...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCGCTGCTTCCAGCAGGTaGGCACGGCACAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPAASSR*ARHRSL
Trigger: CAGGCTCCTGTGCCGTGCGCACCTGCTGGAAGCAGC...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGCGGAACGGGGAGAGCTaGTTCCAGCAGGTGCGCACG +
Preference number: 4 (lower is better)
Translates to: VLVVEAARDSESWEGEARRNGES*FQQVRT
Trigger: CGTGCGCACCTGCTGGAAGCAGCTCTCCCCGTTCCG...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp ACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGCGGAACGGGGAGAGCTaGTTCCAGCAGGTGCGCACG +
Preference number: 4 (lower is better)
Translates to: THAGLCMHVMTVCPEGRLRNGES*FQQVRT
Trigger: CGTGCGCACCTGCTGGAAGCAGCTCTCCCCGTTCCG...CAGCCGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp GGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTGGGCAGCTTGAAGGGTaGCACAGGAGGTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQGMVVSGTLVCIGTHAGGQLEG*HRRSWQ
Trigger: CTGCCAGGACCTCCTGTGGCACCCTTCAAGCTGCCC...ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAATGCTCCCAGGCCCCCTaGTCTGCCAGTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKCSQAP*SASEVP
Trigger: AGGGACCTCACTGGCAGAGCAGGGGGCCTGGGAGCA...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCCTGCAGGAGGACATaGAGGCCCAGTCTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKACRRT*RPSLPA
Trigger: CGCTGGCAGACTGGGCCTGCATGTCCTCCTGCAGGC...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGCTCAGCTGCTGTAACTaGCCCAAAACTCAGCTATTT +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPLSCCN*PKTQLF
Trigger: AAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAG...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACGCCTTGATGCCCACGTaGGTATTGTGGGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GGSGWSPPGLITERTCAYALMPT*VLWASA
Trigger: GGCAGACGCCCACAATACCCACGTGGGCATCAAGGC...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGCAGCACCACTGCACCTaGCAGTGGCAGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRQHHCT*QWQEKA
Trigger: GGCCTTCTCCTGCCACTGCCAGGTGCAGTGGTGCTG...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp GGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCTCAGGGAGTTGGCCAGGGCAAGGTTGGGGATGCTTaGGTTAAGGGAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GDWAAPPRPWRSQGVGQGKVGDA*VKGGGF
Trigger: AAAGCCTCCTCCCTTAACCCAAGCATCCCCAACCTT...GCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGGCTCCTCCTCGCCCTTaGAGGTCTCAGGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRAPPRP*RSQGVG
Trigger: GCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGC...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTCCTGCTGCCAAGGTGTaGGCCAGGTGCTTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: WHGAVCLPGDEGYQESWAPAAKV*ARCLGQ
Trigger: CTGACCCAAGCACCTGGCCCACACCTTGGCAGCAGG...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCGGCAGGGGACCACCTTaGGGAGGGTGGGTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGGRGPP*GGWVGP
Trigger: TGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCC...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGCTTTCTGTACTGATATaGGTATCAGCCAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPLSVLI*VSARLA
Trigger: AGCCAGTCTGGCTGATACCCATATCAGTACAGAAAG...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CAA 72 bp CCAGCTCCGAGACAGACCCAGTCATGGAATACAGGTTaGTCCTCCTTCCCAGCGACCCGGCCTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PAPRQTQSWNTG*SSFPATRPPAQ
Trigger: CTGAGCAGGAGGCCGGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCACCTGCTGTGCCAGGTaGGTACTTGCTGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPTCCAR*VLAGPA
Trigger: TGCCGGCCCAGCAAGTACTCACCTGGCACAGCAGGT...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGACCTGCTGTGCCAGGTaGGTACTTGCTGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: LIWVSARLAMSPALAQAQTCCAR*VLAGPA
Trigger: TGCCGGCCCAGCAAGTACTCACCTGGCACAGCAGGT...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCACTCTCGAGACAAGAATaGGGCCTCAGCGGAGGCATA +
Preference number: 4 (lower is better)
Translates to: GPLGVASMGSWSLQPSQALSRQE*GLSGGI
Trigger: TATGCCTCCGCTGAGGCCTCATTCTTGTCTCGAGAG...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACTTGAGCACGGCTGGGTaGGTGTGCATAACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GGSGWSPPGLITERTCAYLSTAG*VCITQL
Trigger: GAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAA...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp TTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGTGGCAGAGGCCATTAGGAACTaGAGGAGGCTACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPSHDPGTASHEVRMQVAEAIRN*RRLPRS
Trigger: GCTCCTGGGTAGCCTCCTTCAGTTCCTAATGGCCTC...TGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCGCTGCTTCCAGCAGGTaGGCACGGCACAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGAASSR*ARHRSL
Trigger: CAGGCTCCTGTGCCGTGCGCACCTGCTGGAAGCAGC...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTCCAGCTGGCACTGCCTaGCTTGGCATTCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: WHGAVCLPGDEGYQESWAPAGTA*LGIPSP
Trigger: TGGGCTAGGAATGCCAAGGCAGGCAGTGCCAGCTGG...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCCAGGTGAGTACTTGCTaGGCCGGCAGAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLQVSTC*AGRSWV
Trigger: CACCCAGCTTCTGCCGGCCCAGCAAGTACTCACCTG...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCTCACTTCCTCCTGGGTaGCATCGGGCCCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPSLPPG*HRAPLW
Trigger: CCAGAGTGGGGCCCGATGCCACCCAGGAGGAAGTGA...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTGCAGGGCCAGCAAAGTaGCCAAGGGCTTCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: WHGAVCLPGDEGYQESWAAGPAK*PRASRK
Trigger: CTTTCGGGAAGCCCTTGGCCACTTTGCTGGCCCTGC...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCGAGGTCTCAGGGAGTTaGCCAGGGCACAGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPEVSGS*PGHSQR
Trigger: CCGCTGACTGTGCCCTGGCCAACTCCCTGAGACCTC...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GCACTGAGTCCCGCCTTGGTGGCTAGTTCTCCCACCTGTCTTACCTGCACTGGTGGGTGGAGGCAGAGTTaGGGTCTCGGAGGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ALSPALVASSPTCLTCTGGWRQS*GLGGAR
Trigger: TCTTGCTCCTCCGAGACCCCAACTCTGCCTCCACCC...ACCAGTGCAGGTAAGACAGGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCTGGATCAGGGTGCTCTaGCCTCCACGTTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: APETWDSTWGKCQHAIQIWIRVL*PPRCSQ
Trigger: CTGGGAGCAACGTGGAGGCCAGAGCACCCTGATCCA...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCGTGGTATCCAGGCTTTaGGGCTCCTGGGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLVVSRL*GSWAQS
Trigger: GCTCTGAGCCCAGGAGCCCCAAAGCCTGGATACCAC...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTTGGGGAGGGTGGGTTaGCCCAAGCGCCGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGLGRVG*PKRRLS
Trigger: GGAGAGACGGCGCTTGGGCCAACCCACCCTCCCCAA...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
3UTR CAA 72 bp TGTCAGCCCCATGAGGCAGAGACTTGGTCCTGTTCCTaGCTGCACCAAGCACCCAGGATGCTGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CQPHEAETWSCS*LHQAPRMLPGA
Trigger: AGCACCAGGCAGCATCCTGGGTGCTTGGTGCAGCAAGGAACAGGACCAAGTCTCTGCCTCATGGGGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGCACGGCACAGGAGCCTaGTACGCCATGGCACTTACA +
Preference number: 4 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRHGTGA*YAMALT
Trigger: TGTAAGTGCCATGGCGTATCAGGCTCCTGTGCCGTG...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR TCA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGCCGGCTGGGCAGCTTaGAGGGTGCCACAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPEAGWAA*RVPQEV
Trigger: GACCTCCTGTGGCACCCTTCAAGCTGCCCAGCCGGC...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR TCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCAGGGAGAAAGGAAGCTaGCAGATGGGCGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPREKGS*QMGVAG
Trigger: CCCTGCCACGCCCATCTGTCAGCTTCCTTTCTCCCT...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCTGGCACTGCCAGCCATaGAGTCAGAATGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: APETWDSTWGKCQHAIQIWHCQP*SQNAGG
Trigger: GCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCA...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATGGCAGCCAAAGCCCCTaGGACATGGGACTCCACTTG +
Preference number: 4 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHGSQSP*DMGLHL
Trigger: CAAGTGGAGTCCCATGTCTCAGGGGCTTTGGCTGCC...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGCCAGGTGAGTACTTaGTGGGCCGGCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHCQVST*WAGRSW
Trigger: CCAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCA...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGCCCGCAGCACAGGCTaGTGCAGCTGGCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LGMLGLREEALLLFVEYRARSTG*CSWPPG
Trigger: CCCGGGAGGCCAGCTGCAGCAGCCTGTGCTGCGGGC...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp CCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTCATGTGATGACAGTCTaGCCAGAGGGCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRNGGEWHTRVHWHTCRFHVMTV*PEGRLG
Trigger: GCCCAGCCGGCCCTCTGGGCAGACTGTCATCACATG...AAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp GCTTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCCTGTTCAACCTCAGGTaGACTGAGTCCCGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: ASLSSWAHSGIQALGLLGLFNLR*TESRLG
Trigger: ACCAAGGCGGGACTCAGTGCACCTGAGGTTGAACAG...GCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GCTTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCCCATTTTTCTCCTGCTaGCAAGGTGTGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ASLSSWAHSGIQALGLLGPFFSC*QGVGQV
Trigger: CACCTGGCCCACACCTTGGCAGCAGGAGAAAAATGG...GCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACTCCCCATTTTTCTCCTaGTGCCAAGGTGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGSGWSPPGLITERTCAYSPFFS*CQGVGQ
Trigger: CTGGCCCACACCTTGGCAGCAGGAGAAAAATGGGGA...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCCTTGGTCCTGTTCCTTaGTGCACCAAGCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: EGLDGAHQGSSQSGHVLTLGPVP*CTKHPG
Trigger: TCCTGGGTGCTTGGTGCAGCAAGGAACAGGACCAAG...GGTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCCGCAGTTTCAGCACCTaGCCCGTCTCACGGAACGGG +
Preference number: 4 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGRSFST*PVSRNG
Trigger: CCCGTTCCGTGAGACGGGCCAGGTGCTGAAACTGCG...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCCAGGTGAGTACTTGCTaGGCCGGCAGAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: EYRGRQKAGQGMVVSGTLQVSTC*AGRSWV
Trigger: CACCCAGCTTCTGCCGGCCCAGCAAGTACTCACCTG...GAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGCAGGTGAGTACTTGCTaGGCCGGCAGAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VLVVEAARDSESWEGEARQVSTC*AGRSWV
Trigger: CACCCAGCTTCTGCCGGCCCAGCAAGTACTCACCTG...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGACAGGCTGCTGCAGCTaGCCTCCCGGGAGCACACCC +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGTGCCS*PPGSTP
Trigger: GGGTGTGCTCCCGGGAGGCCAGCTGCAGCAGCCTGT...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp TGCACTGGTGGTAGTTTTGAGCACGGCTGGGTGAGTGTGCATAACCCAGCTCTCCAGCACCACTGCACCTaGCAGTGGCAGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: CTGGSFEHGWVSVHNPALQHHCT*QWQEKA
Trigger: GGCCTTCTCCTGCCACTGCCAGGTGCAGTGGTGCTG...GAGAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GTGTGCCTGTGTGGAGGTACCAGTCTCTCCTCCTTTCACAGAGGGCCTTGGCAGAAGGAAGCTGACAGATaGGCGTGGCAGGGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: VCLCGGTSLSSFHRGPWQKEADR*AWQGQQ
Trigger: TTGCTGGCCCTGCCACGCCCATCTGTCAGCTTCCTT...CTGCCAAGGCCCTCTGTGAAAGGAGGAGAGACTGGTACCTCCACACAGGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATGGGCTCAGGTCAGTTTaGCTTCTCAGCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHGLRSV*LLSRAS
Trigger: AGAGGCCCGGCTGAGAAGCCAAACTGACCTGAGCCC...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCCAGGTGGCATGTTGGTaGATCAGGGTGCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLQVACW*IRVLWP
Trigger: AGGCCAGAGCACCCTGATCCACCAACATGCCACCTG...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAATGTCCAGGGTTGGCATaGGGCTGTCTGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKCPGLA*GCLSAR
Trigger: CCTGGCAGACAGACAGCCCCATGCCAACCCTGGACA...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGGACTCCATATTTGTTTaGTCTGTTGGGTCCATTACA +
Preference number: 4 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPDSIFV*SVGSIT
Trigger: TGTAATGGACCCAACAGACCAAACAAATATGGAGTC...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAAACTTACACGTGGTCCTaGGGCCACTCTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQETYTWS*GHSSQP
Trigger: AGGCTGTGAAGAGTGGCCTCAGGACCACGTGTAAGT...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGCACGGCACAGGAGCCTaGTACGCCATGGCACTTACA +
Preference number: 4 (lower is better)
Translates to: VLVVEAARDSESWEGEARHGTGA*YAMALT
Trigger: TGTAAGTGCCATGGCGTATCAGGCTCCTGTGCCGTG...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp GGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCTCAGGGAGTTGGCCAGGGCTTTGCTTCTCTTTGTTaGGTATCGAGGGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GDWAAPPRPWRSQGVGQGFASLC*VSREAK
Trigger: TTTTGCCTCCCTCGATACTCAACAAAGAGAAGCAAA...GCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp CCACTTGGGGGAAGTGCCAACATGCCATCCAGATCCAAAAGGCTGGGATCACAGAGCCAGCTGAGAAACTaGGCTCGCCACGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: PLGGSANMPSRSKRLGSQSQLRN*ARHVTA
Trigger: GGCAGTGACGTGGCGAGCTCAGTTTCTCAGCTGGCT...CTGTGATCCCAGCCTTTTGGATCTGGATGGCATGTTGGCACTTCCCCCAAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCCACTCAAGAGCCAGCTaGGAAACTGAGCTCGCCACG +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPHSRAS*ETELAT
Trigger: CGTGGCGAGCTCAGTTTCTCAGCTGGCTCTTGAGTG...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp TTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGTGGCAAAGGAACTGCTTCCCTaGGTTCTTGGGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: LPSHDPGTASHEVRMQVAKELLP*VLGLTV
Trigger: CACTGTGAGCCCAAGAACTCAGGGAAGCAGTTCCTT...TGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGGCTGCTTCCAGCAGGTaGGCACGGCACAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGAASSR*ARHRSL
Trigger: CAGGCTCCTGTGCCGTGCGCACCTGCTGGAAGCAGC...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp CCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTTGCCAGGTGAGTACTTaGTGGGCCGGCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRNGGEWHTRVHWHTCRFCQVST*WAGRSW
Trigger: CCAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCA...AAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp GGAAATTATCAAAGTCACGTCTCCTCCTCAAGTAAGAGCCAAAGTGAGGGCCAAGCCCGCAGCACAGGCTaGTGCAGCTGGCCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GNYQSHVSSSSKSQSEGQARSTG*CSWPPG
Trigger: CCCGGGAGGCCAGCTGCAGCAGCCTGTGCTGCGGGC...TTGGCCCTCACTTTGGCTCTTACTTGAGGAGGAGACGTGACTTTGATAATTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GTGTGCCTGTGTGGAGGTACCAGTCTCTCCTCCTTTCACAGAGGGCCTTGGCAGAGTGGCACACTCGTGTaGATTGGCACACATGCCGGT +
Preference number: 4 (lower is better)
Translates to: VCLCGGTSLSSFHRGPWQSGTLV*IGTHAG
Trigger: ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACT...CTGCCAAGGCCCTCTGTGAAAGGAGGAGAGACTGGTACCTCCACACAGGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTAGTGGCACACTCGTGTaGATTGGCACACATGCCGGT +
Preference number: 4 (lower is better)
Translates to: GQGMVVSGTLVCIGTHAGSGTLV*IGTHAG
Trigger: ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACT...ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTCAGCAAGGGGACCCCTaGAAGGTCTTCATCCTGAAC +
Preference number: 4 (lower is better)
Translates to: WHGAVCLPGDEGYQESWAQQGDP*KVFILN
Trigger: GTTCAGGATGAAGACCTTGCAGGGGTCCCCTTGCTG...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GCTTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCAAGGTGTGGGCCAGGTaGTTGGGTCAGCAATGTCAT +
Preference number: 4 (lower is better)
Translates to: ASLSSWAHSGIQALGLLGKVWAR*LGQQCH
Trigger: ATGACATTGCTGACCCAAGCACCTGGCCCACACCTT...GCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCGGAGCCCTCAGAACCTaGACTGTGCCATTGACTTGG +
Preference number: 4 (lower is better)
Translates to: APETWDSTWGKCQHAIQIGALRT*TVPLTW
Trigger: CCAAGTCAATGGCACAGTGCAGGTTCTGAGGGCTCC...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGTGGCATCCACTTGGGGGAAGTaGCAACATGCCATCCAGATC +
Preference number: 4 (lower is better)
Translates to: LPSHDPGTASHEVRMQVASTWGK*QHAIQI
Trigger: GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGA...TGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTATGGGGCTGTCTGTCTaGCAGGTGATGAAGGGTACC +
Preference number: 4 (lower is better)
Translates to: WHGAVCLPGDEGYQESWAMGLSV*QVMKGT
Trigger: GGTACCCTTCATCACCTGGCAGACAGACAGCCCCAT...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTGAGCCTGATACGCCATaGCACTTACACGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GQGMVVSGTLVCIGTHAGEPDTP*HLHVVL
Trigger: CAGGACCACGTGTAAGTGCCATGGCGTATCAGGCTC...ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp GAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGCCAGACTGGCTTGCTaGGCAGTAGGCCTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: EYRGRQKAGQGMVVSGTLARLAC*AVGLVL
Trigger: AAGCACTAGGCCTACTGCCCAGCAAGCCAGTCTGGC...GAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp TGCACTGGTGGTAGTTTTGAGCACGGCTGGGTGAGTGTGCATAACCCAGCTCTCGAGGTGTGTGACACCTaGAGCCCACTGCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: CTGGSFEHGWVSVHNPALEVCDT*SPLHLS
Trigger: GCTCAGGTGCAGTGGGCTCCAGGTGTCACACACCTC...GAGAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGATCACAGCCTaGGAAGGAACTGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKAGITA*EGTASL
Trigger: CAGGGAAGCAGTTCCTTCCCAGGCTGTGATCCCAGC...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTACATGGGACTCCACTTaGGGGAAGTGCCAACATGCC +
Preference number: 4 (lower is better)
Translates to: WHGAVCLPGDEGYQESWATWDST*GKCQHA
Trigger: GGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGT...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp ACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGGCCTCCATGGGTTCCTaGTCTCTCCAGCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: THAGLCMHVMTVCPEGRLASMGS*SLQPSQ
Trigger: CTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGC...CAGCCGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATAAGGACCCCTTGGAGTaGCCTCCATGGGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHKDPLE*PPWVPG
Trigger: ACCAGGAACCCATGGAGGCCACTCCAAGGGGTCCTT...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GCACTGAGTCCCGCCTTGGTGGCTAGTTCTCCCACCTGTCTTACCTGCACTGGTGTAGCCCAAGCTTCTTaGGCAGTGTGGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ALSPALVASSPTCLTCTGVAQAS*AVWAEG
Trigger: TCCTTCTGCCCACACTGCCCAAGAAGCTTGGGCTAC...ACCAGTGCAGGTAAGACAGGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAACACTCTTCACAGCCTTaGTGCCCACGTGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQEHSSQP*CPRGYC
Trigger: ACAATACCCACGTGGGCATCAAGGCTGTGAAGAGTG...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGACCTGCTGTGCCAGGTaGGTACTTGCTGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGTCCAR*VLAGPA
Trigger: TGCCGGCCCAGCAAGTACTCACCTGGCACAGCAGGT...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR TCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGCCGGCTGGGCAGCTTaGAGGGTGCCACAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LGMLGLREEALLLFVEYRAGWAA*RVPQEV
Trigger: GACCTCCTGTGGCACCCTTCAAGCTGCCCAGCCGGC...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR TCA 90 bp CCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTGCCAAGGAATGGTGGTaGGTGGCACACTCGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PRNGGEWHTRVHWHTCRFAKEWW*VAHSCA
Trigger: TGCACACGAGTGTGCCACTCACCACCATTCCTTGGC...AAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR TCA 90 bp CACTCAAGCACAGAAAGCTCTCCTTTCTCTGAACGGATGGCTTCTACCACCTGTCCCCTGCTCTGCCAGTaGGGTCCCTGCTGCCTTACG +
Preference number: 4 (lower is better)
Translates to: HSSTESSPFSERMASTTCPLLCQ*GPCCLT
Trigger: CGTAAGGCAGCAGGGACCTCACTGGCAGAGCAGGGG...ACAGGTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTTTCTGTGCTTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAAGAGGTTGTGATGAGCTaGGATCTTGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQEEVVMS*DLATAL
Trigger: GAGTGCAGTGGCAAGATCTCAGCTCATCACAACCTC...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGGCCAAGAGAGTCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LIWVSARLAMSPALAQAQAKRVT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGTGACTCTCTTGGC...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGGGTATTGTGGGCGTCTaGCCGTGCCCGCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGGIVGV*PCPQVL
Trigger: AAGGACCTGCGGGCACGGGCAGACGCCCACAATACC...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp GAGGGTTTCCGGGAAAATACACAAACCCCACCTGTGCTGTCTGTGAAATATAGCTTGGTGAGGCTGCCCTaGCTGGCAGGGGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: EGFRENTQTPPVLSVKYSLVRLP*LAGAHS
Trigger: GCTGTGGGCCCCTGCCAGGCAGGGCAGCCTCACCAA...GCTATATTTCACAGACAGCACAGGTGGGGTTTGTGTATTTTCCCGGAAACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGATTGGTGAGGCTGCCCTaGCTGGCAGGGGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: LGMLGLREEALLLFVEYRLVRLP*LAGAHS
Trigger: GCTGTGGGCCCCTGCCAGGCAGGGCAGCCTCACCAA...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCCAGCATCCAGCAGACTaGCCTGATCCACTGGAGACT +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPQHPAD*PDPLET
Trigger: AGTCTCCAGTGGATCAGGGCAGTCTGCTGGATGCTG...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TGCACTGGTGGTAGTTTTGAGCACGGCTGGGTGAGTGTGCATAACCCAGCTCTCGTTGGTGGATCAGGGTaGTCTGGCCTCCACGTTGCT +
Preference number: 4 (lower is better)
Translates to: CTGGSFEHGWVSVHNPALVGGSG*SGLHVA
Trigger: AGCAACGTGGAGGCCAGAGCACCCTGATCCACCAAC...GAGAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCTCTTAGCAGCCAGCCACTaGCTAGATGCCTTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: FPEFLGSQWYPGFGAPGLLAASH*LDALEP
Trigger: AGGCTCTAAGGCATCTAGGCAGTGGCTGGCTGCTAA...GAGCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATCACAGAGCGGACATGTaGTTACCAGCTCCGAGACAG +
Preference number: 4 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHHRADM*LPAPRQ
Trigger: CTGTCTCGGAGCTGGTAAGCACATGTCCGCTCTGTG...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGCACTCCAACCTGCTGTaGCAGGTGAGTACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LIWVSARLAMSPALAQAQHSNLL*QVSTCW
Trigger: CCAGCAAGTACTCACCTGGCACAGCAGGTTGGAGTG...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGACCCACGTGGGTATTGTaGGCGTCTGCCCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LGMLGLREEALLLFVEYRPTWVL*ASARAR
Trigger: GCGGGCACGGGCAGACGCCCACAATACCCACGTGGG...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGCGCAGTTTCAGCACCTaGCCCGTCTCACGGAACGGG +
Preference number: 4 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPERSFST*PVSRNG
Trigger: CCCGTTCCGTGAGACGGGCCAGGTGCTGAAACTGCG...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGGCTGACAGATGGGCGTaGCAGGGCCAGCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGADRWA*QGQQSG
Trigger: GCCACTTTGCTGGCCCTGCCACGCCCATCTGTCAGC...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCAAGTCAGAATGCAGGTaGCATGTTGGTGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: EGLDGAHQGSSQSGHVLTKSECR*HVGGSG
Trigger: CCCTGATCCACCAACATGCCACCTGCATTCTGACTT...GGTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCCCAGATCCAAAAGGCTaGGATCACAGCCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPPDPKG*DHSLGR
Trigger: CCTTCCCAGGCTGTGATCCCAGCCTTTTGGATCTGG...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp ACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGAGCAACGGGGGCACTTaGGGCATCCTGTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: THAGLCMHVMTVCPEGRLSNGGT*GILSIR
Trigger: TCTAATGGACAGGATGCCCCAAGTGCCCCCGTTGCT...CAGCCGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTAGTAATGTCCAGGGTTaGCATGGGGCTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: WHGAVCLPGDEGYQESWASNVQG*HGAVCL
Trigger: CAGACAGACAGCCCCATGCCAACCCTGGACATTACT...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CAA 72 bp TCTCCCTGTTCAACCTCAGGTGCACTGAGTCCCGCCTaGGTGGCTAGTTCTCCCACCTGTCTTACCTGCACT +
Preference number: 4 (lower is better)
Translates to: SPCSTSGALSPA*VASSPTCLTCT
Trigger: AGTGCAGGTAAGACAGGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTGCACCTGAGGTTGAACAGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp CCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTACTTACACGTGGTCCTaGGGCCACTCTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PRNGGEWHTRVHWHTCRFTYTWS*GHSSQP
Trigger: AGGCTGTGAAGAGTGGCCTCAGGACCACGTGTAAGT...AAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR TCA 90 bp TGCCCTTTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGTCAAGTCATAGCTCGTaGGCCAGCTGTTCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: CPLPSHDPGTASHEVRMQSSHSS*ASCSSV
Trigger: TACTGAAGAACAGCTGGCTCACGAGCTATGACTTGA...CTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAAAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGGAGGTTGTGATGAGCTaGGATCTTGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: VLVVEAARDSESWEGEAREVVMS*DLATAL
Trigger: GAGTGCAGTGGCAAGATCTCAGCTCATCACAACCTC...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTGGACCCCAGGAAGTTaGTCAGAAACTTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRWTPGS*SETWCC
Trigger: ACAGCACCAAGTTTCTGAGCAACTTCCTGGGGTCCA...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAATGGACCCCAGGAAGTTaGTCAGAAACTTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQEWTPGS*SETWCC
Trigger: ACAGCACCAAGTTTCTGAGCAACTTCCTGGGGTCCA...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCATGTCTTTCTCACTCTaGCCTCCTCTCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: APETWDSTWGKCQHAIQIMSFSL*PPLQVL
Trigger: GAGGACTTGGAGAGGAGGGCAGAGTGAGAAAGACAT...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTCACCTCCCAAGAACATaGTGGCTCCAAGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: GQGMVVSGTLVCIGTHAGHLPRT*WLQAIH
Trigger: ATGAATGGCTTGGAGCCAGCATGTTCTTGGGAGGTG...ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGAGCTCGCCACGTCACTaGCAGGCACCAGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGSSPRH*QAPGSC
Trigger: ACAGCTTCCTGGTGCCTGGCAGTGACGTGGCGAGCT...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATAACAAGAGAGGCATGTaGAACAGGAACCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHNKRGM*NRNPQP
Trigger: AGGCTGGGGGTTCCTGTTGCACATGCCTCTCTTGTT...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TGCACTGGTGGTAGTTTTGAGCACGGCTGGGTGAGTGTGCATAACCCAGCTCTCAGCCTGGGAAGGAACTaGTTCCCTGAGTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: CTGGSFEHGWVSVHNPALSLGRN*FPEFLG
Trigger: GCCCAAGAACTCAGGGAAGCAGTTCCTTCCCAGGCT...GAGAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp ACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGACCAAGCACCCAGGATaGTGCCTGGTGCTCAATAAG +
Preference number: 4 (lower is better)
Translates to: THAGLCMHVMTVCPEGRLTKHPG*CLVLNK
Trigger: CTTATTGAGCACCAGGCAGCATCCTGGGTGCTTGGT...CAGCCGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCAGTGAGCAGAGATCATaGCAGTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGSEQRS*QCTPAW
Trigger: CCAGGCTGGAGTGCACTGGCATGATCTCTGCTCACT...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGCCTTGATGCCCACGTaGGTATTGTGGGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPEALMPT*VLWASA
Trigger: GGCAGACGCCCACAATACCCACGTGGGCATCAAGGC...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCGAGCCTGATACGCCATaGCACTTACACGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGEPDTP*HLHVVL
Trigger: CAGGACCACGTGTAAGTGCCATGGCGTATCAGGCTC...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGTGCCACAGGAGGTCCTaGCAGTGCCAGACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGCHRRS*QCQTGL
Trigger: CAAGCCAGTCTGGCACTGCCAGGACCTCCTGTGGCA...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp TTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGTGGCATATTGTGAACTCAGCTaGTATGGGGGTGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: LPSHDPGTASHEVRMQVAYCELS*YGGVTD
Trigger: GTCTGTGACACCCCCATACCAGCTGAGTTCACAATA...TGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp CCACTTGGGGGAAGTGCCAACATGCCATCCAGATCCAAAAGGCTGGGATCACAGCCATGTGTGCCTGTGTaGAGGTACCAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PLGGSANMPSRSKRLGSQPCVPV*RYQSLL
Trigger: GAGGAGAGACTGGTACCTCCACACAGGCACACATGG...CTGTGATCCCAGCCTTTTGGATCTGGATGGCATGTTGGCACTTCCCCCAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GTGTGCCTGTGTGGAGGTACCAGTCTCTCCTCCTTTCACAGAGGGCCTTGGCAGACTGTGCCATTGACTTaGGGTGTCCATGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: VCLCGGTSLSSFHRGPWQTVPLT*GVHVSS
Trigger: GCTGCTAACATGGACACCCCAAGTCAATGGCACAGT...CTGCCAAGGCCCTCTGTGAAAGGAGGAGAGACTGGTACCTCCACACAGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGAGCCAGGCTTAGCAAGGACTCAAGCACCTATAACCCCAGCCAGGGCAAAAGCATGGCCACAGTAATGTaGCCCCACCTACCTCACAGA +
Preference number: 4 (lower is better)
Translates to: GARLSKDSSTYNPSQGKSMATVM*PHLPHR
Trigger: TCTGTGAGGTAGGTGGGGCCACATTACTGTGGCCAT...GCTTTTGCCCTGGCTGGGGTTATAGGTGCTTGAGTCCTTGCTAAGCCTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAATTCTTGGGCTCACAGTaGTATCCAGGCTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKFLGSQ*YPGFGA
Trigger: AGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAA...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp ACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGACCCAGGATGCTGCCTaGTGCTCAATAAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: THAGLCMHVMTVCPEGRLTQDAA*CSIRDP
Trigger: GGGATCTCTTATTGAGCACCAGGCAGCATCCTGGGT...CAGCCGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTGTCAGGGAGGGATGTaGTGCCAGCTACACCAGGAA +
Preference number: 4 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGCQGGM*CQLHQE
Trigger: TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACA...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp CCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTCACTCTTCACAGCCTTaGTGCCCACGTGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: PRNGGEWHTRVHWHTCRFHSSQP*CPRGYC
Trigger: ACAATACCCACGTGGGCATCAAGGCTGTGAAGAGTG...AAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR TCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGCCTCTGCGCTGGGAGTaGAGATTCCTTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGPLRWE*RFLWPA
Trigger: TGCTGGCCAAAGGAATCTTCACTCCCAGCGCAGAGG...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp AGCTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCTGCACTGTGCCATTaGCTTGGGGTGTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: SSETDPVMEYRFVLLPSDPALCH*LGVSML
Trigger: TAACATGGACACCCCAAGTCAATGGCACAGTGCAGG...GTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGAGGACTATGTGCTCATaGGAGGCAGGCAGGGGCATC +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGRTMCS*EAGRGI
Trigger: GATGCCCCTGCCTGCCTCTCATGAGCACATAGTCCT...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCTGGACCCCAGGAAGTTaGTCAGAAACTTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPWTPGS*SETWCC
Trigger: ACAGCACCAAGTTTCTGAGCAACTTCCTGGGGTCCA...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGAAATTATCAAAGTCACGTCTCCTCCTCAAGTAAGAGCCAAAGTGAGGGCCAAGTGGGCGTCTGCCCGTaGCCGCAGGTCCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GNYQSHVSSSSKSQSEGQVGVCP*PQVLVS
Trigger: GGAAACAAGGACCTGCGGGCACGGGCAGACGCCCAC...TTGGCCCTCACTTTGGCTCTTACTTGAGGAGGAGACGTGACTTTGATAATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp CCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTTACACAAGCTCCTCCTaGACACATTGCTGGCACTCC +
Preference number: 4 (lower is better)
Translates to: PRNGGEWHTRVHWHTCRFYTSSS*THCWHS
Trigger: GGAGTGCCAGCAATGTGTGCAGGAGGAGCTTGTGTA...AAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCAGTAGGCCTAGTGCTTaGAGGTGTACACAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPSRPSA*RCTQAP
Trigger: AGGAGCTTGTGTACACCTGCAAGCACTAGGCCTACT...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCGTGCATTGGCACACATaGCGGTTTATGCATGCATGT +
Preference number: 4 (lower is better)
Translates to: APETWDSTWGKCQHAIQIVHWHT*RFMHAC
Trigger: ACATGCATGCATAAACCGGCATGTGTGCCAATGCAC...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGCACCAGGAAGCTGTTaGCCTCCTCCTCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LGMLGLREEALLLFVEYRAPGSC*PPPLRW
Trigger: CCAGCGCAGAGGAGGAGGGCAACAGCTTCCTGGTGC...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGAGCCAGGCTTAGCAAGGACTCAAGCACCTATAACCCCAGCCAGGGCAAAAGCGCCATGAAGTCAGAATaGAGGTGGCATGTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GARLSKDSSTYNPSQGKSAMKSE*RWHVGG
Trigger: TCCACCAACATGCCACCTGCATTCTGACTTCATGGC...GCTTTTGCCCTGGCTGGGGTTATAGGTGCTTGAGTCCTTGCTAAGCCTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGAGCCAGGCTTAGCAAGGACTCAAGCACCTATAACCCCAGCCAGGGCAAAAGCAAGCACCCAGGATGCTaGCTGGTGCTCAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: GARLSKDSSTYNPSQGKSKHPGC*LVLNKR
Trigger: TCTCTTATTGAGCACCAGGCAGCATCCTGGGTGCTT...GCTTTTGCCCTGGCTGGGGTTATAGGTGCTTGAGTCCTTGCTAAGCCTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGGCTATGGCAAGACACTaGCAAGTGAGGGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: LIWVSARLAMSPALAQAQAMARH*QVREMR
Trigger: CCTCATTTCCCTCACTTGGCAGTGTCTTGCCATAGC...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGACGCAGTTTCAGCACCTaGCCCGTCTCACGGAACGGG +
Preference number: 4 (lower is better)
Translates to: LGMLGLREEALLLFVEYRRSFST*PVSRNG
Trigger: CCCGTTCCGTGAGACGGGCCAGGTGCTGAAACTGCG...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp TGCACTGGTGGTAGTTTTGAGCACGGCTGGGTGAGTGTGCATAACCCAGCTCTCAGGAATGGTGGTGAGTaGCACACTCGTGTGCATTGG +
Preference number: 4 (lower is better)
Translates to: CTGGSFEHGWVSVHNPALRNGGE*HTRVHW
Trigger: CCAATGCACACGAGTGTGCCACTCACCACCATTCCT...GAGAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATAAGGTTGGGGATGCTTaGGTTAAGGGAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHKVGDA*VKGGGF
Trigger: AAAGCCTCCTCCCTTAACCCAAGCATCCCCAACCTT...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGCCTTCACTTCCAGCTaGCACTGCCTGCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPEAFTSS*HCLPWH
Trigger: ATGCCAAGGCAGGCAGTGCCAGCTGGAAGTGAAGGC...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGAGCCAGGCTTAGCAAGGACTCAAGCACCTATAACCCCAGCCAGGGCAAAAGCAGTTTTGAGCACGGCTaGGTGAGTGTGCATAACCCA +
Preference number: 4 (lower is better)
Translates to: GARLSKDSSTYNPSQGKSSFEHG*VSVHNP
Trigger: TGGGTTATGCACACTCACCCAGCCGTGCTCAAAACT...GCTTTTGCCCTGGCTGGGGTTATAGGTGCTTGAGTCCTTGCTAAGCCTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGCTGGGCTTGTGGGCCAGGTGCTTaGGTCAGCAATGTCATTTTA +
Preference number: 4 (lower is better)
Translates to: WHGAVCLPGDEGYQESWACGPGA*VSNVIL
Trigger: TAAAATGACATTGCTGACCCAAGCACCTGGCCCACA...AGCCCAGCTTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp CACTCAAGCACAGAAAGCTCTCCTTTCTCTGAACGGATGGCTTCTACCACCTGTCCAAGAGGGCCGAGGTaGGTCTTCAGGGGTAACTGG +
Preference number: 4 (lower is better)
Translates to: HSSTESSPFSERMASTTCPRGPR*VFRGNW
Trigger: CCAGTTACCCCTGAAGACCCACCTCGGCCCTCTTGG...ACAGGTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTTTCTGTGCTTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCAGACAGACCCAGTCATaGAATACAGGTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: APETWDSTWGKCQHAIQIRQTQS*NTGLSS
Trigger: GGAGGACAAACCTGTATTCCATGACTGGGTCTGTCT...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGTTGGGAGGGGCCCAGTaGTGTAGCCCAAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGLGGAQ*CSPSFL
Trigger: CAAGAAGCTTGGGCTACACCACTGGGCCCCTCCCAA...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCTGTTCTTCAGTATTGTaGACTCAGCTGGTATGGGGG +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPCSSVL*TQLVWG
Trigger: CCCCCATACCAGCTGAGTTCACAATACTGAAGAACA...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp GAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCAATTTCCTGTGTTGGTaGAGGGTCAGCAACTCTAGG +
Preference number: 4 (lower is better)
Translates to: EYRGRQKAGQGMVVSGTLNFLCW*RVSNSR
Trigger: CCTAGAGTTGCTGACCCTTCACCAACACAGGAAATT...GAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCCTTAAAGCTGTAGAATaGGGGGTCAGTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPLKAVE*GVSGHS
Trigger: AGAGTGACCACTGACCCCTCATTCTACAGCTTTAAG...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGACACATGCCGGTTTATaGATGCATGTGATGACAGTC +
Preference number: 4 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRTHAGL*MHVMTV
Trigger: GACTGTCATCACATGCATGCATAAACCGGCATGTGT...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATGTGCATTGGCACACATaGCGGTTTATGCATGCATGT +
Preference number: 4 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHVHWHT*RFMHAC
Trigger: ACATGCATGCATAAACCGGCATGTGTGCCAATGCAC...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp GAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCCCAAAATTTCAGTCCTaGTGTGCTCTTGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: EYRGRQKAGQGMVVSGTLPKFQS*CALGLP
Trigger: AGGGAGACCAAGAGCACAGCAGGACTGAAATTTTGG...GAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGATTAGAGCCTGCCCTTTaGCCTCCCACGACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LGMLGLREEALLLFVEYRLEPAL*PPTTLA
Trigger: TGCCAGGGTCGTGGGAGGGCAAAGGGCAGGCTCTAA...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACAAAGTGCTTTACAAATaGCAGGTGTGGGAATTCTCG +
Preference number: 4 (lower is better)
Translates to: GGSGWSPPGLITERTCAYKVLYK*QVWEFS
Trigger: CGAGAATTCCCACACCTGGCATTTGTAAAGCACTTT...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCCCAGGTTCAGGCTTCTaGACAGCTTTGTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGPGSGF*TALFLW
Trigger: CCACAAGAACAAAGCTGTGCAGAAGCCTGAACCTGG...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp TGCACTGGTGGTAGTTTTGAGCACGGCTGGGTGAGTGTGCATAACCCAGCTCTCCCTTGTTTCCTCTCTTaGACCCCAGGAAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: CTGGSFEHGWVSVHNPALPCFLS*TPGSCS
Trigger: TGAGCAACTTCCTGGGGTCCAAGAGAGGAAACAAGG...GAGAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGATGCCACAGGAGGTCCTaGCAGTGCCAGACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LGMLGLREEALLLFVEYRCHRRS*QCQTGL
Trigger: CAAGCCAGTCTGGCACTGCCAGGACCTCCTGTGGCA...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp GAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCCTTTCTCTGAACGGATaGCTTCTACCACCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: EYRGRQKAGQGMVVSGTLLSLNG*LLPPVL
Trigger: AAGCACAGGTGGTAGAAGCCATCCGTTCAGAGAAAG...GAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GAGGGTTTCCGGGAAAATACACAAACCCCACCTGTGCTGTCTGTGAAATATAGCGAAGTCACTTCCTCCTaGGTGGCATCGGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: EGFRENTQTPPVLSVKYSEVTSS*VASGPT
Trigger: AGTGGGGCCCGATGCCACCCAGGAGGAAGTGACTTC...GCTATATTTCACAGACAGCACAGGTGGGGTTTGTGTATTTTCCCGGAAACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGATGCAGGTGGCATGTTaGTGGATCAGGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGMQVAC*WIRVLW
Trigger: CCAGAGCACCCTGATCCACCAACATGCCACCTGCAT...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGCCCTTTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGACAGCTCTCCATCTCTaGACCTCATCTATAAAATGG +
Preference number: 4 (lower is better)
Translates to: CPLPSHDPGTASHEVRMQTALHL*TSSIKW
Trigger: CCATTTTATAGATGAGGTCCAGAGATGGAGAGCTGT...CTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAAAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGGTACCAGGAAAGCTaGGCTTATCTAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPEGYQES*AYLDQG
Trigger: CCCCTGGTCTAGATAAGCCCAGCTTTCCTGGTACCC...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGACAGCTTTGTTCTTGTaGTTGAGGCAGCCAGGGATT +
Preference number: 4 (lower is better)
Translates to: VLVVEAARDSESWEGEARTALFL*LRQPGI
Trigger: AATCCCTGGCTGCCTCAACCACAAGAACAAAGCTGT...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGCCAAGGAATGGTGGTaGGTGGCACACTCGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LGMLGLREEALLLFVEYRAKEWW*VAHSCA
Trigger: TGCACACGAGTGTGCCACTCACCACCATTCCTTGGC...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR TCA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCAGAAGTTCATGGTTGTTaGGAAAGGAAAGGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GPLGVASMGSWSLQPSQAEVHGC*ERKGSK
Trigger: TTTTGAACCTTTCCTTTCTCAACAACCATGAACTTC...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp GAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGGGGTGCTCAATAAGTaGTGGCTTCCATTGTTATTC +
Preference number: 4 (lower is better)
Translates to: EYRGRQKAGQGMVVSGTLGVLNK*WLPLLF
Trigger: GAATAACAATGGAAGCCATCACTTATTGAGCACCCC...GAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGTCCATCCCCACCAATTaGTATAGGTTTATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VLVVEAARDSESWEGEARSIPTN*YRFMPA
Trigger: TGCAGGCATAAACCTATATCAATTGGTGGGGATGGA...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGTACAGCATCCTTAATTaGATCACCTGGCCACCTACA +
Preference number: 4 (lower is better)
Translates to: VLVVEAARDSESWEGEARYSILN*ITWPPT
Trigger: TGTAGGTGGCCAGGTGATTCAATTAAGGATGCTGTA...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTGTGGGCGTCTGCCCGTaGCCGCAGGTCCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFVGVCP*PQVLVS
Trigger: GGAAACAAGGACCTGCGGGCACGGGCAGACGCCCAC...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCACACATGCCGGTTTATaGATGCATGTGATGACAGTC +
Preference number: 4 (lower is better)
Translates to: EYRGRQKAGQGMVVSGTLTHAGL*MHVMTV
Trigger: GACTGTCATCACATGCATGCATAAACCGGCATGTGT...GAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGTCTCAGCCGGGCCTCTaGAGTCAAAAATCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPESQPGL*SQKSFQ
Trigger: CTGGAAGGATTTTTGACTGCAGAGGCCCGGCTGAGA...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp CCACTTGGGGGAAGTGCCAACATGCCATCCAGATCCAAAAGGCTGGGATCACAGAGCGCAGCTGACTTTTaGAAAAGCAGCCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: PLGGSANMPSRSKRLGSQSAADF*KSSQKS
Trigger: GGATTTCTGGCTGCTTTTGCAAAAGTCAGCTGCGCT...CTGTGATCCCAGCCTTTTGGATCTGGATGGCATGTTGGCACTTCCCCCAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGCCCACGTGGGTATTGTaGGCGTCTGCCCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMPTWVL*ASARAR
Trigger: GCGGGCACGGGCAGACGCCCACAATACCCACGTGGG...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp CACTCAAGCACAGAAAGCTCTCCTTTCTCTGAACGGATGGCTTCTACCACCTGTGAGCCTGATACGCCATaGCACTTACACGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: HSSTESSPFSERMASTTCEPDTP*HLHVVL
Trigger: CAGGACCACGTGTAAGTGCCATGGCGTATCAGGCTC...ACAGGTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTTTCTGTGCTTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGAGGAATGGTGGTGAGTaGCACACTCGTGTGCATTGG +
Preference number: 4 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPERNGGE*HTRVHW
Trigger: CCAATGCACACGAGTGTGCCACTCACCACCATTCCT...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CCA 90 bp CACTCAAGCACAGAAAGCTCTCCTTTCTCTGAACGGATGGCTTCTACCACCTGTTCCCAGGAAGCAAGATaGAATAGCCCCTCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: HSSTESSPFSERMASTTCSQEAR*NSPSLP
Trigger: CGGGAGAGAGGGGCTATTCCATCTTGCTTCCTGGGA...ACAGGTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTTTCTGTGCTTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp CACTCAAGCACAGAAAGCTCTCCTTTCTCTGAACGGATGGCTTCTACCACCTGTGCAAAACCAGGGGAGTaGTGGAGGTGTGTGACACCT +
Preference number: 4 (lower is better)
Translates to: HSSTESSPFSERMASTTCAKPGE*WRCVTP
Trigger: AGGTGTCACACACCTCCACCACTCCCCTGGTTTTGC...ACAGGTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTTTCTGTGCTTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGCTTTCTGTACTGATATaGGTATCAGCCAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: LIWVSARLAMSPALAQAQLSVLI*VSARLA
Trigger: AGCCAGTCTGGCTGATACCCATATCAGTACAGAAAG...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp CACTCAAGCACAGAAAGCTCTCCTTTCTCTGAACGGATGGCTTCTACCACCTGTCACTCTTCACAGCCTTaGTGCCCACGTGGGTATTGT +
Preference number: 4 (lower is better)
Translates to: HSSTESSPFSERMASTTCHSSQP*CPRGYC
Trigger: ACAATACCCACGTGGGCATCAAGGCTGTGAAGAGTG...ACAGGTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTTTCTGTGCTTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTACCTGCTGTGCCAGGTaGGTACTTGCTGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFTCCAR*VLAGPA
Trigger: TGCCGGCCCAGCAAGTACTCACCTGGCACAGCAGGT...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTTTGCTTCTCTTTGTTaGGTATCGAGGGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHFASLC*VSREAK
Trigger: TTTTGCCTCCCTCGATACTCAACAAAGAGAAGCAAA...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR TCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCCTCCAACCAGCAACATaGTCACGCAGTATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGLQPAT*SRSICR
Trigger: TCTACAAATACTGCGTGATCATGTTGCTGGTTGGAG...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTGGTATTGTGGGCGTCTaGCCGTGCCCGCAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFGIVGV*PCPQVL
Trigger: AAGGACCTGCGGGCACGGGCAGACGCCCACAATACC...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGGCTGCTTCCAGCAGGTaGGCACGGCACAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGAASSR*ARHRSL
Trigger: CAGGCTCCTGTGCCGTGCGCACCTGCTGGAAGCAGC...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGCGGAACGGGGAGAGCTaGTTCCAGCAGGTGCGCACG +
Preference number: 4 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMRNGES*FQQVRT
Trigger: CGTGCGCACCTGCTGGAAGCAGCTCTCCCCGTTCCG...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGAGTAGGCCTAGTGCTTaGAGGTGTACACAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GMLGLREEALLLFVEYRGSRPSA*RCTQAP
Trigger: AGGAGCTTGTGTACACCTGCAAGCACTAGGCCTACT...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR GCA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAAGGCCCAATAGTTCTATaGATCTTTGATGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQEGPIVL*IFDVFS
Trigger: AGAGAAGACATCAAAGATGCATAGAACTATTGGGCC...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GAGGGTTTCCGGGAAAATACACAAACCCCACCTGTGCTGTCTGTGAAATATAGCAAAGCCCCTGAGACATaGGACTCCACTTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: EGFRENTQTPPVLSVKYSKAPET*DSTWGK
Trigger: CTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGCTTT...GCTATATTTCACAGACAGCACAGGTGGGGTTTGTGTATTTTCCCGGAAACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGTTGGGGAGGGTGGGTTaGCCCAAGCGCCGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMLGRVG*PKRRLS
Trigger: GGAGAGACGGCGCTTGGGCCAACCCACCCTCCCCAA...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp ACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGAACGGAGAAATCAAGTaGGATGAAAGGGGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: THAGLCMHVMTVCPEGRLNGEIK*DERGKS
Trigger: ACTTTTACCCCTTTCATCTCACTTGATTTCTCCGTT...CAGCCGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTGGCAGCCAGGGATTCTaGGAGTTGGGAAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFGSQGF*ELGRGS
Trigger: GCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCC...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGAGTGGGCGTCTGCCCGTaGCCGCAGGTCCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRVGVCP*PQVLVS
Trigger: GGAAACAAGGACCTGCGGGCACGGGCAGACGCCCAC...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTTGCCAGGTGAGTACTTaGTGGGCCGGCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFCQVST*WAGRSW
Trigger: CCAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCA...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGCGCAGTTTCAGCACCTaGCCCGTCTCACGGAACGGG +
Preference number: 4 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMRSFST*PVSRNG
Trigger: CCCGTTCCGTGAGACGGGCCAGGTGCTGAAACTGCG...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTCAGGTGAGTACTTGCTaGGCCGGCAGAAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFQVSTC*AGRSWV
Trigger: CACCCAGCTTCTGCCGGCCCAGCAAGTACTCACCTG...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp CACTCAAGCACAGAAAGCTCTCCTTTCTCTGAACGGATGGCTTCTACCACCTGTCTCGGAGGAGCAAGATaGATTGGGAAGGCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HSSTESSPFSERMASTTCLGGAR*IGKAEK
Trigger: TTTCTCTGCCTTCCCAATCCATCTTGCTCCTCCGAG...ACAGGTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTTTCTGTGCTTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGCTTCCCTGAGTTCTTaGGCTCACAGTGGTATCCAG +
Preference number: 4 (lower is better)
Translates to: LGMLGLREEALLLFVEYRASLSS*AHSGIQ
Trigger: CTGGATACCACTGTGAGCCCAAGAACTCAGGGAAGC...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGGCCAATATTGACAGATaGCTGTCACTCAAAACATAC +
Preference number: 4 (lower is better)
Translates to: LIWVSARLAMSPALAQAQANIDR*LSLKTY
Trigger: GTATGTTTTGAGTGACAGCCATCTGTCAATATTGGC...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTCACGGCACAGGAGCCTaGTACGCCATGGCACTTACA +
Preference number: 4 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFHGTGA*YAMALT
Trigger: TGTAAGTGCCATGGCGTATCAGGCTCCTGTGCCGTG...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAAAGCTCTCCTTTCTCTaGACGGATGGCTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: LGMLGLREEALLLFVEYRKLSFL*TDGFYH
Trigger: GTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTT...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp AGCTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACAATGTCCACAGGATCTaGGGAAATTATCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SSETDPVMEYRFVLLPSDNVHRI*GNYQSH
Trigger: GTGACTTTGATAATTTCCTCAGATCCTGTGGACATT...GTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGGCCTTGATGCCCACGTaGGTATTGTGGGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGALMPT*VLWASA
Trigger: GGCAGACGCCCACAATACCCACGTGGGCATCAAGGC...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GCACTGAGTCCCGCCTTGGTGGCTAGTTCTCCCACCTGTCTTACCTGCACTGGTCAGCCAGAAATCCAGTaGAAAACAATTCATTTTTAC +
Preference number: 4 (lower is better)
Translates to: ALSPALVASSPTCLTCTGQPEIQ*KTIHFY
Trigger: GTAAAAATGAATTGTTTTCCACTGGATTTCTGGCTG...ACCAGTGCAGGTAAGACAGGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCGACTCCATATTTGTTTaGTCTGTTGGGTCCATTACA +
Preference number: 4 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGDSIFV*SVGSIT
Trigger: TGTAATGGACCCAACAGACCAAACAAATATGGAGTC...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGAGGCAGCCAGGGATTCTaGGAGTTGGGAAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRGSQGF*ELGRGS
Trigger: GCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCC...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTCTGAGATCTTGCCACTaGACTCCAACCTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFLRSCH*TPTCCA
Trigger: GGCACAGCAGGTTGGAGTGCAGTGGCAAGATCTCAG...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTCTGAGATCTTGCCACTaGACTCCAACCTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFLRSCH*TPTCCA
Trigger: GGCACAGCAGGTTGGAGTGCAGTGGCAAGATCTCAG...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTAGTGAGCAGAGATCATaGCAGTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFSEQRS*QCTPAW
Trigger: CCAGGCTGGAGTGCACTGGCATGATCTCTGCTCACT...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGACAGGGAGGGATGTGGTaGCAGCTACACCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRQGGMW*QLHQEA
Trigger: GGCTTCCTGGTGTAGCTGGCACCACATCCCTCCCTG...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTCAGGGATCAGCAGGCTaGTTTCCAGCTGGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFQGSAG*FPAGLA
Trigger: AGCTAACCCAGCTGGAAAGCAGCCTGCTGATCCCTG...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGAGCCTTGATGCCCACGTaGGTATTGTGGGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRALMPT*VLWASA
Trigger: GGCAGACGCCCACAATACCCACGTGGGCATCAAGGC...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTAGGCTGCTTTCCAGCTaGGTTAGCTCATTCCCCACC +
Preference number: 4 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFRLLSS*VSSFPT
Trigger: GGTGGGGAATGAGCTAACCCAGCTGGAAAGCAGCCT...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp AATAGCAAAGTGCTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCACACGGCACAGGAGCCTaGTACGCCATGGCACTTACA +
Preference number: 4 (lower is better)
Translates to: NSKVLYKCQVWEFSLSLSHGTGA*YAMALT
Trigger: TGTAAGTGCCATGGCGTATCAGGCTCCTGTGCCGTG...TGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR TCA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGGCCAAGAGAGTCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGAKRVT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGTGACTCTCTTGGC...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGCCTGGCCACCTACATTaGCAGATGCTCAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMPGHLH*QMLSCC
Trigger: ACAGCAGCTGAGCATCTGTCAATGTAGGTGGCCAGG...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTCTACACCAGGAAGCCTaGTATGGCAAGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFLHQEA*YGKTLP
Trigger: TGGCAGTGTCTTGCCATAGCAGGCTTCCTGGTGTAG...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTTTCCCCACCTCATCTTaGAGAAGCTCCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFFPTSS*RSSRFR
Trigger: CCTGAACCTGGAGCTTCTGCAAGATGAGGTGGGGAA...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGCAGGGATCAGCAGGCTaGTTTCCAGCTGGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMQGSAG*FPAGLA
Trigger: AGCTAACCCAGCTGGAAAGCAGCCTGCTGATCCCTG...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGGAGCCTGATACGCCATaGCACTTACACGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGEPDTP*HLHVVL
Trigger: CAGGACCACGTGTAAGTGCCATGGCGTATCAGGCTC...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGGTAGTCCCAGCTACTTaGGAGGCTGAGCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMVVPAT*EAEPRE
Trigger: CTCTCTTGGCTCAGCCTCCCAAGTAGCTGGGACTAC...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGAGTAATCCCAGCACCCTaGGAGACTGAGGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRVIPAP*ETEAGR
Trigger: TCTGCCAGCCTCAGTCTCCCAGGGTGCTGGGATTAC...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp CACTCAAGCACAGAAAGCTCTCCTTTCTCTGAACGGATGGCTTCTACCACCTGTAAAGCCTTAACTAGATaGGCAGCCACAAGAATAGAA +
Preference number: 4 (lower is better)
Translates to: HSSTESSPFSERMASTTCKALTR*AATRIE
Trigger: TTCTATTCTTGTGGCTGCTCATCTAGTTAAGGCTTT...ACAGGTGGTAGAAGCCATCCGTTCAGAGAAAGGAGAGCTTTCTGTGCTTGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTTGGACCCCAGGAAGTTaGTCAGAAACTTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFWTPGS*SETWCC
Trigger: ACAGCACCAAGTTTCTGAGCAACTTCCTGGGGTCCA...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp AATAGCAAAGTGCTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCAGGCTTCTACCACCTGTaGTTTCTCCCCATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NSKVLYKCQVWEFSLSLSGFYHL*FLPISG
Trigger: GCCAGAGATGGGGAGAAAGCACAGGTGGTAGAAGCC...TGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGTTCCCCACCTCATCTTaGAGAAGCTCCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGFPTSS*RSSRFR
Trigger: CCTGAACCTGGAGCTTCTGCAAGATGAGGTGGGGAA...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp AATAGCAAAGTGCTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCACAGAAGAAGGGGGCCTaGACCCAGAAGGGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: NSKVLYKCQVWEFSLSLSQKKGA*TQKGRK
Trigger: TTTTCTGCCCTTCTGGGTCCAGGCCCCCTTCTTCTG...TGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp AATAGCAAAGTGCTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCATACACAAGCTCCTCCTaGACACATTGCTGGCACTCC +
Preference number: 4 (lower is better)
Translates to: NSKVLYKCQVWEFSLSLSYTSSS*THCWHS
Trigger: GGAGTGCCAGCAATGTGTGCAGGAGGAGCTTGTGTA...TGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR GCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGACTACACCAGGAAGCCTaGTATGGCAAGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRLHQEA*YGKTLP
Trigger: TGGCAGTGTCTTGCCATAGCAGGCTTCCTGGTGTAG...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTACAGCTTTGTTCTTGTaGTTGAGGCAGCCAGGGATT +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFTALFL*LRQPGI
Trigger: AATCCCTGGCTGCCTCAACCACAAGAACAAAGCTGT...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTTACAGCATCCTTAATTaGATCACCTGGCCACCTACA +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFYSILN*ITWPPT
Trigger: TGTAGGTGGCCAGGTGATTCAATTAAGGATGCTGTA...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTCTCCAACCAGCAACATaGTCACGCAGTATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFLQPAT*SRSICR
Trigger: TCTACAAATACTGCGTGATCATGTTGCTGGTTGGAG...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp AATAGCAAAGTGCTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCAAATTCATCTGTAGGTTaGGAGGGGCCCAGTGGTGTA +
Preference number: 4 (lower is better)
Translates to: NSKVLYKCQVWEFSLSLSNSSVG*EGPSGV
Trigger: TACACCACTGGGCCCCTCCCAACCTACAGATGAATT...TGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CCA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTAAAATTAGTCAGGCGTaGTGGTGCATGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFKISQA*WCMPVI
Trigger: GATTACAGGCATGCACCACCACGCCTGACTAATTTT...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR GCA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGGCCCAATAGTTCTATaGATCTTTGATGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFGPIVL*IFDVFS
Trigger: AGAGAAGACATCAAAGATGCATAGAACTATTGGGCC...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGAAAAATTAGTCAGGCGTaGTGGTGCATGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRKISQA*WCMPVI
Trigger: GATTACAGGCATGCACCACCACGCCTGACTAATTTT...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGCCAATATTGACAGATaGCTGTCACTCAAAACATAC +
Preference number: 4 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFANIDR*LSLKTY
Trigger: GTATGTTTTGAGTGACAGCCATCTGTCAATATTGGC...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGAAAAGATGCCAATATTaGCAGATGGCTGTCACTCAA +
Preference number: 4 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGKRCQY*QMAVTQ
Trigger: TTGAGTGACAGCCATCTGTCAATATTGGCATCTTTT...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR TCA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGAAAAAGATGCCAATATTaGCAGATGGCTGTCACTCAA +
Preference number: 4 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRKRCQY*QMAVTQ
Trigger: TTGAGTGACAGCCATCTGTCAATATTGGCATCTTTT...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CCA 90 bp AATAGCAAAGTGCTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCATACAAATGCCAGGTGTaGGAATTCTCGTTGTCATTA +
Preference number: 4 (lower is better)
Translates to: NSKVLYKCQVWEFSLSLSYKCQV*EFSLSL
Trigger: TAATGACAACGAGAATTCCCACACCTGGCATTTGTA...TGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
3UTR CAA 72 bp AAAGATCTTAATAGGCTTTTATTCATGATTCTAGAATaGGGCATCCCTCCGAACCACAGCTTATTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: KDLNRLLFMILE*GIPPNHSLFKE
Trigger: TTCTTTGAATAAGCTGTGGTTCGGAGGGATGCCCAATTCTAGAATCATGAATAAAAGCCTATTAAGATCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGGTGCCAGGTGAGTACTaGCTGGGCCGGCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPVPGEY*LGRQKL
Trigger: CAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCAC...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGCCACTCTTCACAGCCTaGATGCCCACGTGGGTATTG +
Preference number: 5 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPPLFTA*MPTWVL
Trigger: CAATACCCACGTGGGCATCAAGGCTGTGAAGAGTGG...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GGTGGAGCTGAGGCAGGGGACCACCTTGGGGAGGGTGGGTTGGCCCAAGCGCCGTCCTTGTTTCCTCTCTaGGACCCCAGGAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GGAEAGDHLGEGGLAQAPSLFPL*DPRKLL
Trigger: GAGCAACTTCCTGGGGTCCAAGAGAGGAAACAAGGA...CGGCGCTTGGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCTCAGCTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp TTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGTGGCAGGCCGGCTGGGCAGCTaGAAGGGTGCCACAGGAGGT +
Preference number: 5 (lower is better)
Translates to: LPSHDPGTASHEVRMQVAGRLGS*KGATGG
Trigger: ACCTCCTGTGGCACCCTTCAAGCTGCCCAGCCGGCC...TGCCACCTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GGAGACTGGGCAGCTCCTCCTCGCCCTTGGAGGTCTCAGGGAGTTGGCCAGGGCGACATGGGACTCCACTaGGGGGAAGTGCCAACATGC +
Preference number: 5 (lower is better)
Translates to: GDWAAPPRPWRSQGVGQGDMGLH*GEVPTC
Trigger: GCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTC...GCCCTGGCCAACTCCCTGAGACCTCCAAGGGCGAGGAGGAGCTGCCCAGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS GCA 90 bp TGGCCTCCCGGGAGCACACCCTACCTGCTGTGCCAGGTGAGTACTTaGTGGGCCGGCAGAAGCTGGGTGAGTCCTCCATGTACACCAGGT +
Preference number: 5 (lower is better)
Translates to: WPPGSTPYLLCQVST*WAGRSWVSPPCTPG
Trigger: ACCTGGTGTACATGGAGGACTCACCCAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCACAGCAGGTAGGGTGTGCTCCCGGGAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS GCA 90 bp AGAAACTTGGTGCTGTACTTGAGGTTGTCACCGCACACGCCCCACTaGCAGGCCTGCCGGCTCTCCAGCCCCGGAGAGTCATCACAGGTG +
Preference number: 5 (lower is better)
Translates to: RNLVLYLRLSPHTPH*QACRLSSPGESSQV
Trigger: CACCTGTGATGACTCTCCGGGGCTGGAGAGCCGGCAGGCCTGGCAGTGGGGCGTGTGCGGTGACAACCTCAAGTACAGCACCAAGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTATGCCCACGTGGGTATaGTGGGCGTCTGCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: GQGMVVSGTLVCIGTHAGMPTWV*WASARA
Trigger: GGCACGGGCAGACGCCCACAATACCCACGTGGGCAT...ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp TGCCCTTTGCCCTCCCACGACCCTGGCACTGCCAGCCATGAAGTCAGAATGCAGGGCCACAGGACCCGATaGACCCATCTCAGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: CPLPSHDPGTASHEVRMQGHRTR*THLSQA
Trigger: AGCCTGGCTGAGATGGGTCAATCGGGTCCTGTGGCC...CTGCATTCTGACTTCATGGCTGGCAGTGCCAGGGTCGTGGGAGGGCAAAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCAGGCAGGGGACCACCTaGGGGAGGGTGGGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGRQGTT*GRVGWP
Trigger: GGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCT...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS TCA 90 bp ACAGCTCTAGGCGGCCCAAGGCCTCATTGGTGGCACTGGACACCTTaGCAGCCGAGTCATAGCGCAGTTTCAGCACCTGGCCCGTCTCAC +
Preference number: 5 (lower is better)
Translates to: TALGGPRPHWWHWTP*QPSHSAVSAPGPSH
Trigger: GTGAGACGGGCCAGGTGCTGAAACTGCGCTATGACTCGGCTGTCAAGGTGTCCAGTGCCACCAATGAGGCCTTGGGCCGCCTAGAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS GCA 90 bp GCCACTCTTCACAGCCTTGATGCCCACGTGGGTATTGTGGGCGTCTaGCCGTGCCCGCAGGTCCTTGTTTCCTCTCTTGGACCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: ATLHSLDAHVGIVGV*PCPQVLVSSLGPQE
Trigger: TTCCTGGGGTCCAAGAGAGGAAACAAGGACCTGCGGGCACGGGCAGACGCCCACAATACCCACGTGGGCATCAAGGCTGTGAAGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAACGTGCCCGCAGGTCCTaGTTTCCTCTCTTGGACCCC +
Preference number: 5 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQERARRS*FPLLDP
Trigger: GGGGTCCAAGAGAGGAAACAAGGACCTGCGGGCACG...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGCGTGCCCGCAGGTCCTaGTTTCCTCTCTTGGACCCC +
Preference number: 5 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRRARRS*FPLLDP
Trigger: GGGGTCCAAGAGAGGAAACAAGGACCTGCGGGCACG...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp GAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCATGCCCACGTGGGTATaGTGGGCGTCTGCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: EYRGRQKAGQGMVVSGTLMPTWV*WASARA
Trigger: GGCACGGGCAGACGCCCACAATACCCACGTGGGCAT...GAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGGTGCCAGGTGAGTACTaGCTGGGCCGGCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRVPGEY*LGRQKL
Trigger: CAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCAC...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGACAGTCAGCGGGCCTTaGTCCTGGAGCTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRTVSGP*SWSWHR
Trigger: CCTGTGCCAGCTCCAGGACAAAGGCCCGCTGACTGT...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAAGGGGCTCAGGTCAGTTaGGCTTCTCAGCCGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKGAQVS*ASQPGL
Trigger: GAGGCCCGGCTGAGAAGCCAAACTGACCTGAGCCCC...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCCTTAGAGCCTGCCCTTaGCCCTCCCACGACCCTGGC +
Preference number: 5 (lower is better)
Translates to: EYRGRQKAGQGMVVSGTLLRACP*PSHDPG
Trigger: GCCAGGGTCGTGGGAGGGCAAAGGGCAGGCTCTAAG...GAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GGACCCCTTGGAGTGGCCTCCATGGGTTCCTGGTCTCTCCAGCCTTCTCAGGCATGTAGCCCAAGCTTCTaGGGCAGTGTGGGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GPLGVASMGSWSLQPSQACSPSF*GSVGRR
Trigger: CCTTCTGCCCACACTGCCCAAGAAGCTTGGGCTACA...TGCCTGAGAAGGCTGGAGAGACCAGGAACCCATGGAGGCCACTCCAAGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS GCA 90 bp CTTCACAGCCTTGATGCCCACGTGGGTATTGTGGGCGTCTGCCCGTaGCCGCAGGTCCTTGTTTCCTCTCTTGGACCCCAGGAAGTTGCT +
Preference number: 5 (lower is better)
Translates to: LHSLDAHVGIVGVCP*PQVLVSSLGPQEVA
Trigger: AGCAACTTCCTGGGGTCCAAGAGAGGAAACAAGGACCTGCGGGCACGGGCAGACGCCCACAATACCCACGTGGGCATCAAGGCTGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS GCA 90 bp AGCTTGAAGGGTGCCACAGGAGGTCCTGGCAGTGCCAGACTGGCTTaGTGGGCAGTAGGCCTAGTGCTTGCAGGTGTACACAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SLKGATGGPGSARLA*WAVGLVLAGVHKLL
Trigger: GAGGAGCTTGTGTACACCTGCAAGCACTAGGCCTACTGCCCAGCAAGCCAGTCTGGCACTGCCAGGACCTCCTGTGGCACCCTTCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAAGTGCTGTACTTGAGGTaGTCACCGCACACGCCCCAC +
Preference number: 5 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQEVLYLR*SPHTPH
Trigger: GTGGGGCGTGTGCGGTGACAACCTCAAGTACAGCAC...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCATGCCCACGTGGGTATaGTGGGCGTCTGCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGMPTWV*WASARA
Trigger: GGCACGGGCAGACGCCCACAATACCCACGTGGGCAT...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp AACGGGGGCACTTGGGGCATCCTGTCCATTAGACTCCCTCACTCTAGCTGCCTGCAGTGCCAGACTGGCTaGCTGGGCAGTAGGCCTAGT +
Preference number: 5 (lower is better)
Translates to: NGGTWGILSIRLPHSSCLQCQTG*LGSRPS
Trigger: ACTAGGCCTACTGCCCAGCAAGCCAGTCTGGCACTG...CAGGCAGCTAGAGTGAGGGAGTCTAATGGACAGGATGCCCCAAGTGCCCCCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GGAGCCAGGCTTAGCAAGGACTCAAGCACCTATAACCCCAGCCAGGGCAAAAGCGCACTGAGTCCCGCCTaGGTGGCTAGTTCTCCCACC +
Preference number: 5 (lower is better)
Translates to: GARLSKDSSTYNPSQGKSALSPA*VASSPT
Trigger: GGTGGGAGAACTAGCCACCAAGGCGGGACTCAGTGC...GCTTTTGCCCTGGCTGGGGTTATAGGTGCTTGAGTCCTTGCTAAGCCTGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCCACAGGGAGGGGCCGTaGTCTCCCTGTTCAACCTCA +
Preference number: 5 (lower is better)
Translates to: APETWDSTWGKCQHAIQIHREGP*SPCSTS
Trigger: TGAGGTTGAACAGGGAGACAACGGCCCCTCCCTGTG...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS GCA 90 bp TCCTGGCAGTGCCAGACTGGCTTGCTGGGCAGTAGGCCTAGTGCTTaGAGGTGTACACAAGCTCCTCCTGCACACATTGCTGGCACTCCA +
Preference number: 5 (lower is better)
Translates to: SWQCQTGLLGSRPSA*RCTQAPPAHIAGTP
Trigger: TGGAGTGCCAGCAATGTGTGCAGGAGGAGCTTGTGTACACCTGCAAGCACTAGGCCTACTGCCCAGCAAGCCAGTCTGGCACTGCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp GGAGCCAGGCTTAGCAAGGACTCAAGCACCTATAACCCCAGCCAGGGCAAAAGCGTGCTGTACTTGAGGTaGTCACCGCACACGCCCCAC +
Preference number: 5 (lower is better)
Translates to: GARLSKDSSTYNPSQGKSVLYLR*SPHTPH
Trigger: GTGGGGCGTGTGCGGTGACAACCTCAAGTACAGCAC...GCTTTTGCCCTGGCTGGGGTTATAGGTGCTTGAGTCCTTGCTAAGCCTGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp CCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTGTGCCAGGTGAGTACTaGCTGGGCCGGCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PRNGGEWHTRVHWHTCRFVPGEY*LGRQKL
Trigger: CAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCAC...AAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGGGCAGCTaGAAGGGTGCCACAGGAGGT +
Preference number: 5 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPEGRLGS*KGATGG
Trigger: ACCTCCTGTGGCACCCTTCAAGCTGCCCAGCCGGCC...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp TGCACTGGTGGTAGTTTTGAGCACGGCTGGGTGAGTGTGCATAACCCAGCTCTCTGGGTGGAGGCAGAGTaGGGGTCTCGGAGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: CTGGSFEHGWVSVHNPALWVEAE*GSRRSK
Trigger: CTTGCTCCTCCGAGACCCCAACTCTGCCTCCACCCA...GAGAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTCTTTGAAGCCTCTCTaGAGCAGGCCCATCCTGCCC +
Preference number: 5 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHSLKPL*SRPILP
Trigger: GGGCAGGATGGGCCTGCTCAAGAGAGGCTTCAAAGA...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCGTGCTGTACTTGAGGTaGTCACCGCACACGCCCCAC +
Preference number: 5 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGVLYLR*SPHTPH
Trigger: GTGGGGCGTGTGCGGTGACAACCTCAAGTACAGCAC...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCCTCCTCCTGCACACATaGCTGGCACTCCACGTAGCA +
Preference number: 5 (lower is better)
Translates to: EYRGRQKAGQGMVVSGTLLLLHT*LALHVA
Trigger: TGCTACGTGGAGTGCCAGCAATGTGTGCAGGAGGAG...GAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp AACGGGGGCACTTGGGGCATCCTGTCCATTAGACTCCCTCACTCTAGCTGCCTGGGAGTGAAGATTCCTTaGGCCAGCAGGGAACACAGG +
Preference number: 5 (lower is better)
Translates to: NGGTWGILSIRLPHSSCLGVKIP*ASREHR
Trigger: CCTGTGTTCCCTGCTGGCCAAAGGAATCTTCACTCC...CAGGCAGCTAGAGTGAGGGAGTCTAATGGACAGGATGCCCCAAGTGCCCCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp ACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGACTTGGTCCTGTTCCTaGCTGCACCAAGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: THAGLCMHVMTVCPEGRLTWSCS*LHQAPR
Trigger: CCTGGGTGCTTGGTGCAGCAAGGAACAGGACCAAGT...CAGCCGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGAGACGGGAGAATCGCTaGAATCCGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: VLVVEAARDSESWEGEARRRENR*NPGGGG
Trigger: ACCTCCACCTCCCGGATTCAAGCGATTCTCCCGTCT...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp CCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTTCTTTGAAGCCTCTCTaGAGCAGGCCCATCCTGCCC +
Preference number: 5 (lower is better)
Translates to: PRNGGEWHTRVHWHTCRFSLKPL*SRPILP
Trigger: GGGCAGGATGGGCCTGCTCAAGAGAGGCTTCAAAGA...AAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCTTTGAAGCCTCTCTaGAGCAGGCCCATCCTGCCC +
Preference number: 5 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGSLKPL*SRPILP
Trigger: GGGCAGGATGGGCCTGCTCAAGAGAGGCTTCAAAGA...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACAGGAAAGCTGTCTCTTaGAAGCCTCTCTTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GGSGWSPPGLITERTCAYRKAVS*KPLLSR
Trigger: CCTGCTCAAGAGAGGCTTCAAAGAGACAGCTTTCCT...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTAACTTGGTGCTGTACTaGAGGTTGTCACCGCACACG +
Preference number: 5 (lower is better)
Translates to: GQGMVVSGTLVCIGTHAGNLVLY*RLSPHT
Trigger: CGTGTGCGGTGACAACCTCAAGTACAGCACCAAGTT...ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp GGCAATAAGGAGGCCGTGTGTCAGGGAGGGATGTGGTGCCAGCTACACCAGGAATCCTTGTTTCCTCTCTaGGACCCCAGGAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GNKEAVCQGGMWCQLHQESLFPL*DPRKLL
Trigger: GAGCAACTTCCTGGGGTCCAAGAGAGGAAACAAGGA...TTCCTGGTGTAGCTGGCACCACATCCCTCCCTGACACACGGCCTCCTTATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAACCACTCTTCACAGCCTaGATGCCCACGTGGGTATTG +
Preference number: 5 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKPLFTA*MPTWVL
Trigger: CAATACCCACGTGGGCATCAAGGCTGTGAAGAGTGG...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp ACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGCCACTCTTCACAGCCTaGATGCCCACGTGGGTATTG +
Preference number: 5 (lower is better)
Translates to: THAGLCMHVMTVCPEGRLPLFTA*MPTWVL
Trigger: CAATACCCACGTGGGCATCAAGGCTGTGAAGAGTGG...CAGCCGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTCATGGAATACAGGTTaGTCCTCCTTCCCAGCGACC +
Preference number: 5 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRSWNTG*SSFPAT
Trigger: GGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGA...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GGAGGGTCTGGATGGAGCCCACCAGGGCTCATCACAGAGCGGACATGTGCTTACCTCTTAGGTGTGACTTaGAGCACAGCTCTCCATCTC +
Preference number: 5 (lower is better)
Translates to: GGSGWSPPGLITERTCAYLLGVT*STALHL
Trigger: GAGATGGAGAGCTGTGCTCAAAGTCACACCTAAGAG...GTAAGCACATGTCCGCTCTGTGATGAGCCCTGGTGGGCTCCATCCAGACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTGCTTCCCTGAGTTCTaGGGCTCACAGTGGTATCCA +
Preference number: 5 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRCFPEF*GSQWYP
Trigger: TGGATACCACTGTGAGCCCAAGAACTCAGGGAAGCA...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGTGCACAGCTTTGTTCTaGTGGTTGAGGCAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: VLVVEAARDSESWEGEARCTALF*WLRQPG
Trigger: CCCTGGCTGCCTCAACCACAAGAACAAAGCTGTGCA...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp CTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCCAACTTGGTGCTGTACTaGAGGTTGTCACCGCACACG +
Preference number: 5 (lower is better)
Translates to: LRDRPSHGIQVCPPSQRPNLVLY*RLSPHT
Trigger: CGTGTGCGGTGACAACCTCAAGTACAGCACCAAGTT...GGGTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGTTGGACCCCAGGAAGTaGCTCAGAAACTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: VLVVEAARDSESWEGEARLDPRK*LRNLVL
Trigger: CAGCACCAAGTTTCTGAGCAACTTCCTGGGGTCCAA...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp ACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGTCCTTGTTTCCTCTCTaGGACCCCAGGAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: THAGLCMHVMTVCPEGRLSLFPL*DPRKLL
Trigger: GAGCAACTTCCTGGGGTCCAAGAGAGGAAACAAGGA...CAGCCGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGCAGTGCCAGACTGGCTaGCTGGGCAGTAGGCCTAGT +
Preference number: 5 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPEQCQTG*LGSRPS
Trigger: ACTAGGCCTACTGCCCAGCAAGCCAGTCTGGCACTG...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp GGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTAAGTCCTCAACAAGGTaGGGGATGCTTGGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: GQGMVVSGTLVCIGTHAGKSSTR*GMLGLR
Trigger: CCTTAACCCAAGCATCCCCAACCTTGTTGAGGACTT...ACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp ACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGGCCGGCTGACCTGCACTGTGCCATaGACTTGGGGTGTCCATGTT +
Preference number: 5 (lower is better)
Translates to: THAGLCMHVMTVCPEGRLTCTVP*TWGVHV
Trigger: AACATGGACACCCCAAGTCAATGGCACAGTGCAGGT...CAGCCGGCCCTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGGCTTTGTTCTTGTGGTaGAGGCAGCCAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: LIWVSARLAMSPALAQAQALFLW*RQPGIL
Trigger: CAGAATCCCTGGCTGCCTCAACCACAAGAACAAAGC...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp TGTACTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTGCACAGCTTTGTTCTaGTGGTTGAGGCAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: CTDMGISQTGYVPSTSPGCTALF*WLRQPG
Trigger: CCCTGGCTGCCTCAACCACAAGAACAAAGCTGTGCA...GCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp TGCACTGGTGGTAGTTTTGAGCACGGCTGGGTGAGTGTGCATAACCCAGCTCTCTTGGACCCCAGGAAGTaGCTCAGAAACTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: CTGGSFEHGWVSVHNPALLDPRK*LRNLVL
Trigger: CAGCACCAAGTTTCTGAGCAACTTCCTGGGGTCCAA...GAGAGCTGGGTTATGCACACTCACCCAGCCGTGCTCAAAACTACCACCAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp CCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGTTTGCACACTCGTGTGCATaGGCACACATGCCGGTTTAT +
Preference number: 5 (lower is better)
Translates to: PRNGGEWHTRVHWHTCRFAHSCA*AHMPVY
Trigger: ATAAACCGGCATGTGTGCCAATGCACACGAGTGTGC...AAACCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp AGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATAGGCTTTGCTTCTCTTaGTTGAGTATCGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: REAKGWPRNGGEWHTRVHRLCFS*LSIEGG
Trigger: GCCTCCCTCGATACTCAACAAAGAGAAGCAAAGCCT...ATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp GAGTATCGAGGGAGGCAAAAGGCTGGCCAAGGAATGGTGGTGAGTGGCACACTCAAGTCCTCAACAAGGTaGGGGATGCTTGGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: EYRGRQKAGQGMVVSGTLKSSTR*GMLGLR
Trigger: CCTTAACCCAAGCATCCCCAACCTTGTTGAGGACTT...GAGTGTGCCACTCACCACCATTCCTTGGCCAGCCTTTTGCCTCCCTCGATACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp GAGGGTTTCCGGGAAAATACACAAACCCCACCTGTGCTGTCTGTGAAATATAGCGGGCAGAAGGACCCCTaGGAGTGGCCTCCATGGGTT +
Preference number: 5 (lower is better)
Translates to: EGFRENTQTPPVLSVKYSGQKDP*EWPPWV
Trigger: AACCCATGGAGGCCACTCCAAGGGGTCCTTCTGCCC...GCTATATTTCACAGACAGCACAGGTGGGGTTTGTGTATTTTCCCGGAAACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS CCA 90 bp CTTCTTAGAGGGCTGGTAAGGCTCCCAGGACTGGCATTCAGGCCTTaGCATGCCAGAGGATCAAAAGAAACTGCCCGTCCTTTCATGCAA +
Preference number: 5 (lower is better)
Translates to: LLRGLVRLPGLAFRP*HARGSKETARPFMQ
Trigger: TTGCATGAAAGGACGGGCAGTTTCTTTTGATCCTCTGGCATGCCAAGGCCTGAATGCCAGTCCTGGGAGCCTTACCAGCCCTCTAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575372.5
ENST00000633753.1
CDS-3UTR CAA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGTGCTGTACTTGAGGTaGTCACCGCACACGCCCCAC +
Preference number: 5 (lower is better)
Translates to: LGMLGLREEALLLFVEYRVLYLR*SPHTPH
Trigger: GTGGGGCGTGTGCGGTGACAACCTCAAGTACAGCAC...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCAAGTTGCTCAGAAACTaGGTGCTGTACTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: APETWDSTWGKCQHAIQIKLLRN*VLYLRL
Trigger: CAACCTCAAGTACAGCACCAAGTTTCTGAGCAACTT...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp TGGCCAAGGAATGGTGGTGAGTGGCACACTCGTGTGCATTGGCACACATGCCGGAAGTTGCTCAGAAACTaGGTGCTGTACTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: WPRNGGEWHTRVHWHTCRKLLRN*VLYLRL
Trigger: CAACCTCAAGTACAGCACCAAGTTTCTGAGCAACTT...CCGGCATGTGTGCCAATGCACACGAGTGTGCCACTCACCACCATTCCTTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp TTGGGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAAGTGGTATCCAGGCTTaGGGGCTCCTGGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LGMLGLREEALLLFVEYRSGIQA*GLLGSE
Trigger: CTCTGAGCCCAGGAGCCCCAAAGCCTGGATACCACT...TCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp CTGATATGGGTATCAGCCAGACTGGCTATGTCCCCAGCACTAGCCCAGGCTCAGAAGTTGCTCAGAAACTaGGTGCTGTACTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LIWVSARLAMSPALAQAQKLLRN*VLYLRL
Trigger: CAACCTCAAGTACAGCACCAAGTTTCTGAGCAACTT...CTGAGCCTGGGCTAGTGCTGGGGACATAGCCAGTCTGGCTGATACCCATATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGTTGGACCCCAGGAAGTaGCTCAGAAACTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPELDPRK*LRNLVL
Trigger: CAGCACCAAGTTTCTGAGCAACTTCCTGGGGTCCAA...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGTCCTTGTTTCCTCTCTaGGACCCCAGGAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: GMLGLREEALLLFVEYRGSLFPL*DPRKLL
Trigger: GAGCAACTTCCTGGGGTCCAAGAGAGGAAACAAGGA...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp TCCAGGGTTGGCATGGGGCTGTCTGTCTGCCAGGTGATGAAGGGTACCAGGAAATCAGCGGAGGCATATTaGAAAAGCCAAATCAAGGAC +
Preference number: 5 (lower is better)
Translates to: SRVGMGLSVCQVMKGTRKSAEAY*KSQIKD
Trigger: GTCCTTGATTTGGCTTTTCAAATATGCCTCCGCTGA...TTTCCTGGTACCCTTCATCACCTGGCAGACAGACAGCCCCATGCCAACCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp TGCATTGGCACACATGCCGGTTTATGCATGCATGTGATGACAGTCTGCCCAGAGGTGTGGGCCAGGTGCTaGGGTCAGCAATGTCATTTT +
Preference number: 5 (lower is better)
Translates to: CIGTHAGLCMHVMTVCPEVWARC*GQQCHF
Trigger: AAAATGACATTGCTGACCCAAGCACCTGGCCCACAC...CTCTGGGCAGACTGTCATCACATGCATGCATAAACCGGCATGTGTGCCAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp AGCTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACATGAGTAAGACACTTTaGCCAGAGCAGAAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SSETDPVMEYRFVLLPSDMSKTL*PEQKKG
Trigger: CCCCTTCTTCTGCTCTGGCAAAAGTGTCTTACTCAT...GTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGAAGGCAGGGGACCACCTaGGGGAGGGTGGGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRRQGTT*GRVGWP
Trigger: GGGCCAACCCACCCTCCCCAAGGTGGTCCCCTGCCT...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTCGTGCCCGCAGGTCCTaGTTTCCTCTCTTGGACCCC +
Preference number: 5 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFRARRS*FPLLDP
Trigger: GGGGTCCAAGAGAGGAAACAAGGACCTGCGGGCACG...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGATGCCCACGTGGGTATaGTGGGCGTCTGCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGMPTWV*WASARA
Trigger: GGCACGGGCAGACGCCCACAATACCCACGTGGGCAT...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTGTGCCAGGTGAGTACTaGCTGGGCCGGCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFVPGEY*LGRQKL
Trigger: CAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCAC...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GGAAATTATCAAAGTCACGTCTCCTCCTCAAGTAAGAGCCAAAGTGAGGGCCAACTCCTCCTGCACACATaGCTGGCACTCCACGTAGCA +
Preference number: 5 (lower is better)
Translates to: GNYQSHVSSSSKSQSEGQLLLHT*LALHVA
Trigger: TGCTACGTGGAGTGCCAGCAATGTGTGCAGGAGGAG...TTGGCCCTCACTTTGGCTCTTACTTGAGGAGGAGACGTGACTTTGATAATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp AGCTCCGAGACAGACCCAGTCATGGAATACAGGTTTGTCCTCCTTCCCAGCGACCTTTGCTTCTCTTTGTaGAGTATCGAGGGAGGCAAA +
Preference number: 5 (lower is better)
Translates to: SSETDPVMEYRFVLLPSDLCFSL*SIEGGK
Trigger: TTTGCCTCCCTCGATACTCAACAAAGAGAAGCAAAG...GTCGCTGGGAAGGAGGACAAACCTGTATTCCATGACTGGGTCTGTCTCGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGAGGCTTTGCTTCTCTTaGTTGAGTATCGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GMLGLREEALLLFVEYRGRLCFS*LSIEGG
Trigger: GCCTCCCTCGATACTCAACAAAGAGAAGCAAAGCCT...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp GCTTCCCTGAGTTCTTGGGCTCACAGTGGTATCCAGGCTTTGGGGCTCCTGGGCCTGGCATGTCATTTATaGGTTTATTGTCTTTCTCAC +
Preference number: 5 (lower is better)
Translates to: ASLSSWAHSGIQALGLLGLACHL*VYCLSH
Trigger: GTGAGAAAGACAATAAACCAATAAATGACATGCCAG...GCCCAGGAGCCCCAAAGCCTGGATACCACTGTGAGCCCAAGAACTCAGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GTTCTTGTGGTTGAGGCAGCCAGGGATTCTGAGAGTTGGGAAGGGGAAGCCAGGCAAAAGATGCCAATATaGACAGATGGCTGTCACTCA +
Preference number: 5 (lower is better)
Translates to: VLVVEAARDSESWEGEARQKMPI*TDGCHS
Trigger: TGAGTGACAGCCATCTGTCAATATTGGCATCTTTTG...CCTGGCTTCCCCTTCCCAACTCTCAGAATCCCTGGCTGCCTCAACCACAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGCTGAAATTTCCTGTGTaGGTGAAGGGTCAGCAACTC +
Preference number: 5 (lower is better)
Translates to: GMLGLREEALLLFVEYRGLKFPV*VKGQQL
Trigger: GAGTTGCTGACCCTTCACCAACACAGGAAATTTCAG...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GAGGGTTTCCGGGAAAATACACAAACCCCACCTGTGCTGTCTGTGAAATATAGCAAATTCATCTGTAGGTaGGGAGGGGCCCAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: EGFRENTQTPPVLSVKYSKFICR*GGAQWC
Trigger: ACACCACTGGGCCCCTCCCAACCTACAGATGAATTT...GCTATATTTCACAGACAGCACAGGTGGGGTTTGTGTATTTTCCCGGAAACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GCCCCTGAGACATGGGACTCCACTTGGGGGAAGTGCCAACATGCCATCCAGATCTCATTTATTGGTTTATaGTCTTTCTCACCCACTAGG +
Preference number: 5 (lower is better)
Translates to: APETWDSTWGKCQHAIQISFIGL*SFSPTR
Trigger: CCTAGTGGGTGAGAAAGACAATAAACCAATAAATGA...GATCTGGATGGCATGTTGGCACTTCCCCCAAGTGGAGTCCCATGTCTCAGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp AATAGCAAAGTGCTTTACAAATGCCAGGTGTGGGAATTCTCGTTGTCATTATCACGTGCCCGCAGGTCCTaGTTTCCTCTCTTGGACCCC +
Preference number: 5 (lower is better)
Translates to: NSKVLYKCQVWEFSLSLSRARRS*FPLLDP
Trigger: GGGGTCCAAGAGAGGAAACAAGGACCTGCGGGCACG...TGATAATGACAACGAGAATTCCCACACCTGGCATTTGTAAAGCACTTTGCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGCTTTGCTTCTCTTTGTaGAGTATCGAGGGAGGCAAA +
Preference number: 5 (lower is better)
Translates to: GMLGLREEALLLFVEYRGLCFSL*SIEGGK
Trigger: TTTGCCTCCCTCGATACTCAACAAAGAGAAGCAAAG...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp CGAACCACAGCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTCCACTCTTCACAGCCTaGATGCCCACGTGGGTATTG +
Preference number: 5 (lower is better)
Translates to: RTTAYSKNSNQQHDHAVFPLFTA*MPTWVL
Trigger: CAATACCCACGTGGGCATCAAGGCTGTGAAGAGTGG...AAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGCTGTGGTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GGGATGCTTGGGTTAAGGGAGGAGGCTTTGCTTCTCTTTGTTGAGTATCGAGGGTTAAGGGAGGAGGCTTaGCTTCTCTTTGTTGAGTAT +
Preference number: 5 (lower is better)
Translates to: GMLGLREEALLLFVEYRGLREEA*LLFVEY
Trigger: ATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAA...CCCTCGATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAACCCAAGCATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS-3UTR CAA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGAGACGGGAGAATCGCTaGAATCCGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGRRENR*NPGGGG
Trigger: ACCTCCACCTCCCGGATTCAAGCGATTCTCCCGTCT...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS GCA 90 bp AGGACTGGCATTCAGGCCTTGGCATGCCAGAGGATCAAAAGAAACTaGCCGTCCTTTCATGCAATTGATACAAGAAGCAACAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: RTGIQALACQRIKRN*PSFHAIDTRSNRNC
Trigger: GCAATTTCTGTTGCTTCTTGTATCAATTGCATGAAAGGACGGGCAGTTTCTTTTGATCCTCTGGCATGCCAAGGCCTGAATGCCAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575372.5
ENST00000633753.1
CDS-3UTR CAA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGATCTTTGAAGCCTCTCTaGAGCAGGCCCATCCTGCCC +
Preference number: 5 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRSLKPL*SRPILP
Trigger: GGGCAGGATGGGCCTGCTCAAGAGAGGCTTCAAAGA...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTAACTTGGTGCTGTACTaGAGGTTGTCACCGCACACG +
Preference number: 5 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFNLVLY*RLSPHT
Trigger: CGTGTGCGGTGACAACCTCAAGTACAGCACCAAGTT...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp AGATGCTCAGCTGCTGTAACTGCCCCAAAACTCAGCTATTTGTTACCACTTTTTGGCTTCTGCACAGCTTaGTTCTTGTGGTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: RCSAAVTAPKLSYLLPLFGFCTA*FLWLRQ
Trigger: CTGCCTCAACCACAAGAACAAAGCTGTGCAGAAGCC...AAAAAGTGGTAACAAATAGCTGAGTTTTGGGGCAGTTACAGCAGCTGAGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp TCCATATTTGTTTGGTCTGTTGGGTCCATTACAGGAGCACAGTACAAACTAATGAACTTGGTGCTGTACTaGAGGTTGTCACCGCACACG +
Preference number: 5 (lower is better)
Translates to: SIFVWSVGSITGAQYKLMNLVLY*RLSPHT
Trigger: CGTGTGCGGTGACAACCTCAAGTACAGCACCAAGTT...CATTAGTTTGTACTGTGCTCCTGTAATGGACCCAACAGACCAAACAAATATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGTTGGACCCCAGGAAGTaGCTCAGAAACTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGLDPRK*LRNLVL
Trigger: CAGCACCAAGTTTCTGAGCAACTTCCTGGGGTCCAA...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GCTTATTCAAAGAACTCCAACCAGCAACATGATCACGCAGTATTTGTAGATAGAAGCCAAGAGAGTCACTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: AYSKNSNQQHDHAVFVDRSQESH*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTGACTCTCTTGGCT...TCTATCTACAAATACTGCGTGATCATGTTGCTGGTTGGAGTTCTTTGAATAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGGCTTTGTTCTTGTGGTaGAGGCAGCCAGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGALFLW*RQPGIL
Trigger: CAGAATCCCTGGCTGCCTCAACCACAAGAACAAAGC...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGGGCTTCTGCACAGCTTaGTTCTTGTGGTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGGFCTA*FLWLRQ
Trigger: CTGCCTCAACCACAAGAACAAAGCTGTGCAGAAGCC...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS-3UTR CAA 90 bp GGAAATTATCAAAGTCACGTCTCCTCCTCAAGTAAGAGCCAAAGTGAGGGCCAATTAAGGGAGGAGGCTTaGCTTCTCTTTGTTGAGTAT +
Preference number: 5 (lower is better)
Translates to: GNYQSHVSSSSKSQSEGQLREEA*LLFVEY
Trigger: ATACTCAACAAAGAGAAGCAAAGCCTCCTCCCTTAA...TTGGCCCTCACTTTGGCTCTTACTTGAGGAGGAGACGTGACTTTGATAATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290015.7
CDS-3UTR CAA 90 bp CCCAAGTTAATTGCATTTAGCATGAGTGACTCCATATTTGTTTGGTCTGTTGGGCAAAAGATGCCAATATaGACAGATGGCTGTCACTCA +
Preference number: 5 (lower is better)
Translates to: PKLIAFSMSDSIFVWSVGQKMPI*TDGCHS
Trigger: TGAGTGACAGCCATCTGTCAATATTGGCATCTTTTG...CCCAACAGACCAAACAAATATGGAGTCACTCATGCTAAATGCAATTAACTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393461.2
ENST00000633488.1
CDS GCA 72 bp GTGCTGTACTTGAGGTTGTCACCGCACACGCCCCACTaGCAGGCCTGCCGGCTCTCCAGCCCCGGAGAGTCA +
Preference number: 6 (lower is better)
Translates to: VLYLRLSPHTPH*QACRLSSPGES
Trigger: TGACTCTCCGGGGCTGGAGAGCCGGCAGGCCTGGCAGTGGGGCGTGTGCGGTGACAACCTCAAGTACAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS CCA 72 bp CCGGCTGGGCAGCTTGAAGGGTGCCACAGGAGGTCCTaGCAGTGCCAGACTGGCTTGCTGGGCAGTAGGCCT +
Preference number: 6 (lower is better)
Translates to: PAGQLEGCHRRS*QCQTGLLGSRP
Trigger: AGGCCTACTGCCCAGCAAGCCAGTCTGGCACTGCCAGGACCTCCTGTGGCACCCTTCAAGCTGCCCAGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS GCA 72 bp TTCAGCACCTGGCCCGTCTCACGGAACGGGGAGAGCTaGTTCCAGCAGGTGCGCACGGCACAGGAGCCTGAT +
Preference number: 6 (lower is better)
Translates to: FSTWPVSRNGES*FQQVRTAQEPD
Trigger: ATCAGGCTCCTGTGCCGTGCGCACCTGCTGGAAGCAGCTCTCCCCGTTCCGTGAGACGGGCCAGGTGCTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS CAA 90 bp CTGGCCTCCCGGGAGCACACCCTACCTGCTGTGCCAGGTGAGTACTaGCTGGGCCGGCAGAAGCTGGGTGAGTCCTCCATGTACACCAGG +
Preference number: 6 (lower is better)
Translates to: LASREHTLPAVPGEY*LGRQKLGESSMYTR
Trigger: CCTGGTGTACATGGAGGACTCACCCAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCACAGCAGGTAGGGTGTGCTCCCGGGAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS CAA 72 bp CGGGAGCACACCCTACCTGCTGTGCCAGGTGAGTACTaGCTGGGCCGGCAGAAGCTGGGTGAGTCCTCCATG +
Preference number: 6 (lower is better)
Translates to: REHTLPAVPGEY*LGRQKLGESSM
Trigger: CATGGAGGACTCACCCAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCACAGCAGGTAGGGTGTGCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS TCA 72 bp GGCGGCCCAAGGCCTCATTGGTGGCACTGGACACCTTaGCAGCCGAGTCATAGCGCAGTTTCAGCACCTGGC +
Preference number: 6 (lower is better)
Translates to: GGPRPHWWHWTP*QPSHSAVSAPG
Trigger: GCCAGGTGCTGAAACTGCGCTATGACTCGGCTGTCAAGGTGTCCAGTGCCACCAATGAGGCCTTGGGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS GCA 72 bp CTTGATGCCCACGTGGGTATTGTGGGCGTCTGCCCGTaGCCGCAGGTCCTTGTTTCCTCTCTTGGACCCCAG +
Preference number: 6 (lower is better)
Translates to: LDAHVGIVGVCP*PQVLVSSLGPQ
Trigger: CTGGGGTCCAAGAGAGGAAACAAGGACCTGCGGGCACGGGCAGACGCCCACAATACCCACGTGGGCATCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS GCA 72 bp GGGAGCACACCCTACCTGCTGTGCCAGGTGAGTACTTaGTGGGCCGGCAGAAGCTGGGTGAGTCCTCCATGT +
Preference number: 6 (lower is better)
Translates to: GSTPYLLCQVST*WAGRSWVSPPC
Trigger: ACATGGAGGACTCACCCAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCACAGCAGGTAGGGTGTGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS GCA 72 bp CACAGCCTTGATGCCCACGTGGGTATTGTGGGCGTCTaGCCGTGCCCGCAGGTCCTTGTTTCCTCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: HSLDAHVGIVGV*PCPQVLVSSLG
Trigger: TCCAAGAGAGGAAACAAGGACCTGCGGGCACGGGCAGACGCCCACAATACCCACGTGGGCATCAAGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS CCA 72 bp CCACTCTTCACAGCCTTGATGCCCACGTGGGTATTGTaGGCGTCTGCCCGTGCCCGCAGGTCCTTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: PLFTALMPTWVL*ASARARRSLFP
Trigger: AGGAAACAAGGACCTGCGGGCACGGGCAGACGCCCACAATACCCACGTGGGCATCAAGGCTGTGAAGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS CAA 72 bp AGGCCACTCTTCACAGCCTTGATGCCCACGTGGGTATaGTGGGCGTCTGCCCGTGCCCGCAGGTCCTTGTTT +
Preference number: 6 (lower is better)
Translates to: RPLFTALMPTWV*WASARARRSLF
Trigger: AAACAAGGACCTGCGGGCACGGGCAGACGCCCACAATACCCACGTGGGCATCAAGGCTGTGAAGAGTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS CAA 90 bp CAGCTTGAAGGGTGCCACAGGAGGTCCTGGCAGTGCCAGACTGGCTaGCTGGGCAGTAGGCCTAGTGCTTGCAGGTGTACACAAGCTCCT +
Preference number: 6 (lower is better)
Translates to: QLEGCHRRSWQCQTG*LGSRPSACRCTQAP
Trigger: AGGAGCTTGTGTACACCTGCAAGCACTAGGCCTACTGCCCAGCAAGCCAGTCTGGCACTGCCAGGACCTCCTGTGGCACCCTTCAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS CCA 72 bp AGCACACCCTACCTGCTGTGCCAGGTGAGTACTTGCTaGGCCGGCAGAAGCTGGGTGAGTCCTCCATGTACA +
Preference number: 6 (lower is better)
Translates to: STPYLLCQVSTC*AGRSWVSPPCT
Trigger: TGTACATGGAGGACTCACCCAGCTTCTGCCGGCCCAGCAAGTACTCACCTGGCACAGCAGGTAGGGTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS CAA 90 bp ATGCCCACGTGGGTATTGTGGGCGTCTGCCCGTGCCCGCAGGTCCTaGTTTCCTCTCTTGGACCCCAGGAAGTTGCTCAGAAACTTGGTG +
Preference number: 6 (lower is better)
Translates to: MPTWVLWASARARRS*FPLLDPRKLLRNLV
Trigger: CACCAAGTTTCTGAGCAACTTCCTGGGGTCCAAGAGAGGAAACAAGGACCTGCGGGCACGGGCAGACGCCCACAATACCCACGTGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS CCA 72 bp CGTCTGCCCGTGCCCGCAGGTCCTTGTTTCCTCTCTTaGACCCCAGGAAGTTGCTCAGAAACTTGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: RLPVPAGPCFLS*TPGSCSETWCC
Trigger: ACAGCACCAAGTTTCTGAGCAACTTCCTGGGGTCCAAGAGAGGAAACAAGGACCTGCGGGCACGGGCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS CCA 72 bp GGGCTGGTAAGGCTCCCAGGACTGGCATTCAGGCCTTaGCATGCCAGAGGATCAAAAGAAACTGCCCGTCCT +
Preference number: 6 (lower is better)
Translates to: GLVRLPGLAFRP*HARGSKETARP
Trigger: AGGACGGGCAGTTTCTTTTGATCCTCTGGCATGCCAAGGCCTGAATGCCAGTCCTGGGAGCCTTACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575372.5
ENST00000633753.1
CDS CAA 90 bp GTATTGTGGGCGTCTGCCCGTGCCCGCAGGTCCTTGTTTCCTCTCTaGGACCCCAGGAAGTTGCTCAGAAACTTGGTGCTGTACTTGAGG +
Preference number: 6 (lower is better)
Translates to: VLWASARARRSLFPL*DPRKLLRNLVLYLR
Trigger: CCTCAAGTACAGCACCAAGTTTCTGAGCAACTTCCTGGGGTCCAAGAGAGGAAACAAGGACCTGCGGGCACGGGCAGACGCCCACAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS GCA 72 bp TGCCAGACTGGCTTGCTGGGCAGTAGGCCTAGTGCTTaGAGGTGTACACAAGCTCCTCCTGCACACATTGCT +
Preference number: 6 (lower is better)
Translates to: CQTGLLGSRPSA*RCTQAPPAHIA
Trigger: AGCAATGTGTGCAGGAGGAGCTTGTGTACACCTGCAAGCACTAGGCCTACTGCCCAGCAAGCCAGTCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290015.7
ENST00000613753.2
CDS GCA 72 bp GGTAAGGCTCCCAGGACTGGCATTCAGGCCTTGGCATaGCAGAGGATCAAAAGAAACTGCCCGTCCTTTCAT +
Preference number: 6 (lower is better)
Translates to: GKAPRTGIQALA*QRIKRNCPSFH
Trigger: ATGAAAGGACGGGCAGTTTCTTTTGATCCTCTGGCATGCCAAGGCCTGAATGCCAGTCCTGGGAGCCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575372.5
ENST00000633753.1
CDS CAA 72 bp TTTCCTCTCTTGGACCCCAGGAAGTTGCTCAGAAACTaGGTGCTGTACTTGAGGTTGTCACCGCACACGCCC +
Preference number: 6 (lower is better)
Translates to: FPLLDPRKLLRN*VLYLRLSPHTP
Trigger: GGGCGTGTGCGGTGACAACCTCAAGTACAGCACCAAGTTTCTGAGCAACTTCCTGGGGTCCAAGAGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290015.7
ENST00000393461.2
ENST00000613753.2
ENST00000633488.1
CDS GCA 72 bp ATTCAGGCCTTGGCATGCCAGAGGATCAAAAGAAACTaGCCGTCCTTTCATGCAATTGATACAAGAAGCAAC +
Preference number: 6 (lower is better)
Translates to: IQALACQRIKRN*PSFHAIDTRSN
Trigger: GTTGCTTCTTGTATCAATTGCATGAAAGGACGGGCAGTTTCTTTTGATCCTCTGGCATGCCAAGGCCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575372.5
ENST00000633753.1