RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNT4 (Homo sapiens)

Ensembl gene IDs: ENSG00000162552

Ensembl transcript IDs: ENST00000290167.11, ENST00000415567.1, ENST00000441048.1

Found 442 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTaGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGC +
Preference number: 1 (lower is better)
Translates to: PHAGSQRHEQGPFGQ*QPQRPRLWGGPGWC
Trigger: GCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCATGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp GAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTaGGGAGGCCCTGGTTGGTGCCCTTGGGGTTGCCTGCCTGGTTTC +
Preference number: 1 (lower is better)
Translates to: EQGPFGQWQPQRPRL*GGPGWCPWGCLPGF
Trigger: GAAACCAGGCAGGCAACCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 90 bp GGTTTGGGCAGGATGTGGACCCTCTGGCCAATTTCCAGGCCACGGTaGGGCCAAGAGGGGGTGGGCTATGTAAGGGCTGTGCCAGTTCCC +
Preference number: 1 (lower is better)
Translates to: GLGRMWTLWPISRPR*GQEGVGYVRAVPVP
Trigger: GGGAACTGGCACAGCCCTTACATAGCCCACCCCCTCTTGGCCTCACCGTGGCCTGGAAATTGGCCAGAGGGTCCACATCCTGCCCAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp GCCGGGATCCCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTaGGTCTGGGGAGTGGTTAAGTTTCCTCTTCCCAGGGGCAGGCTG +
Preference number: 1 (lower is better)
Translates to: AGIPGPGWQPICLPR*VWGVVKFPLPRGRL
Trigger: CAGCCTGCCCCTGGGAAGAGGAAACTTAACCACTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp ATCCCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTGGGTCTaGGGAGTGGTTAAGTTTCCTCTTCCCAGGGGCAGGCTGGGGCAG +
Preference number: 1 (lower is better)
Translates to: IPGPGWQPICLPRWV*GVVKFPLPRGRLGQ
Trigger: CTGCCCCAGCCTGCCCCTGGGAAGAGGAAACTTAACCACTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp CTCGGGCATGACTGCAAAGGCACAGCCGGGATCCCTGGTCCAGGATaGCAGCCTATATGCCTGCCTAGGTGGGTCTGGGGAGTGGTTAAG +
Preference number: 1 (lower is better)
Translates to: LGHDCKGTAGIPGPG*QPICLPRWVWGVVK
Trigger: CTTAACCACTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCCCGGCTGTGCCTTTGCAGTCATGCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp CTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGATGTGCTaGGGAGGGGTGCACCACACTGCTGAGACCTCACTGTCAGCCTTC +
Preference number: 1 (lower is better)
Translates to: LAVPMVPGTPGTRMC*GGVHHTAETSLSAF
Trigger: GAAGGCTGACAGTGAGGTCTCAGCAGTGTGGTGCACCCCTCCCCAGCACATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp CAGCCAGGGGAGCAGCGGACCCAGCTGGGCAGCTGTGGCGACAGTTaGATCAGCTTTCATCCACATCAGAGCTGGCCTGCCCCAAGATTA +
Preference number: 1 (lower is better)
Translates to: QPGEQRTQLGSCGDS*ISFHPHQSWPAPRL
Trigger: TAATCTTGGGGCAGGCCAGCTCTGATGTGGATGAAAGCTGATCCAACTGTCGCCACAGCTGCCCAGCTGGGTCCGCTGCTCCCCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp GGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTGTTCCCTaGATGGGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGG +
Preference number: 1 (lower is better)
Translates to: GSSHHTSIQPGPTVP*MGRVAQLFPLGGEG
Trigger: CCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCCCATCCAGGGAACAGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp GGCCTCAGGGCATCACCTTTGCCTTGGGACGAGAGGAGAGTGGTTTaGGCAGGATGTGGACCCTCTGGCCAATTTCCAGGCCACGGTGAG +
Preference number: 1 (lower is better)
Translates to: GLRASPLPWDERRVV*AGCGPSGQFPGHGE
Trigger: CTCACCGTGGCCTGGAAATTGGCCAGAGGGTCCACATCCTGCCCAAACCACTCTCCTCTCGTCCCAAGGCAAAGGTGATGCCCTGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp GCTGGGCTTTATCCAGCCCTAGGCCTCAGGGCATCACCTTTGCCTTaGGACGAGAGGAGAGTGGTTTGGGCAGGATGTGGACCCTCTGGC +
Preference number: 1 (lower is better)
Translates to: AGLYPALGLRASPLP*DERRVVWAGCGPSG
Trigger: GCCAGAGGGTCCACATCCTGCCCAAACCACTCTCCTCTCGTCCCAAGGCAAAGGTGATGCCCTGAGGCCTAGGGCTGGATAAAGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp GGAGGATGGGGTGGGGCAGCAGAGTGGGTTAGCAGCATCCAGAGCTaGGCTTTATCCAGCCCTAGGCCTCAGGGCATCACCTTTGCCTTG +
Preference number: 1 (lower is better)
Translates to: GGWGGAAEWVSSIQS*ALSSPRPQGITFAL
Trigger: CAAGGCAAAGGTGATGCCCTGAGGCCTAGGGCTGGATAAAGCCCAGCTCTGGATGCTGCTAACCCACTCTGCTGCCCCACCCCATCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 90 bp TGGCTGGAGGACTCTTCTGGCCCTGCCTGTCCATCCAGCTTGCTGTaGGAGGTCTGGGGAGCACTGCCGTCTCTGATGTCAGATGGGCAT +
Preference number: 1 (lower is better)
Translates to: WLEDSSGPACPSSLL*EVWGALPSLMSDGH
Trigger: ATGCCCATCTGACATCAGAGACGGCAGTGCTCCCCAGACCTCTCACAGCAAGCTGGATGGACAGGCAGGGCCAGAAGAGTCCTCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 90 bp GTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGTaGTGGTTTGGCGGTTGTACAGGGTCAGGCCCAGGTTGCTGGTGC +
Preference number: 1 (lower is better)
Translates to: VLIHACPSHKPGRGS*WFGGCTGSGPGCWC
Trigger: GCACCAGCAACCTGGGCCTGACCCTGTACAACCGCCAAACCATCACGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR GCA 90 bp AAGGCACAGCCGGGATCCCTGGTCCAGGATGGCAGCCTATATGCCTaGCTAGGTGGGTCTGGGGAGTGGTTAAGTTTCCTCTTCCCAGGG +
Preference number: 1 (lower is better)
Translates to: KAQPGSLVQDGSLYA*LGGSGEWLSFLFPG
Trigger: CCCTGGGAAGAGGAAACTTAACCACTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCCCGGCTGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp CCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGTGATGGTTTaGCGGTTGTACAGGGTCAGGCCCAGGTTGCTGGTGCTGTCTCTT +
Preference number: 1 (lower is better)
Translates to: PCMSFSQAWAGLVMV*RLYRVRPRLLVLSL
Trigger: AAGAGACAGCACCAGCAACCTGGGCCTGACCCTGTACAACCGCCAAACCATCACGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp GGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTaGGCGGGGCTCGTGATGGTTTGGCGGTTGTACAGGGTCAGGCCC +
Preference number: 1 (lower is better)
Translates to: GQGQGLDPCMSFSQA*AGLVMVWRLYRVRP
Trigger: GGGCCTGACCCTGTACAACCGCCAAACCATCACGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 90 bp GAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGTaGCTGGCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTTG +
Preference number: 1 (lower is better)
Translates to: EEFDEWAELSLLLQV*LAPAECDWLSLGTL
Trigger: CAAGGTGCCGAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR GCA 90 bp TGCAAAGGCACAGCCGGGATCCCTGGTCCAGGATGGCAGCCTATATaGCTGCCTAGGTGGGTCTGGGGAGTGGTTAAGTTTCCTCTTCCC +
Preference number: 1 (lower is better)
Translates to: CKGTAGIPGPGWQPI*LPRWVWGVVKFPLP
Trigger: GGGAAGAGGAAACTTAACCACTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCCCGGCTGTGCCTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 90 bp TGTGACTGGCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTTaGCATGTCCCTCTCCAAAGGGGATTGGACGTTCGACTCCACCAG +
Preference number: 1 (lower is better)
Translates to: CDWHLPSVTGLVSAP*HVPLQRGLDVRLHQ
Trigger: CTGGTGGAGTCGAACGTCCAATCCCCTTTGGAGAGGGACATGTCAAGGTGCCGAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR GCA 90 bp TACAGGGTCAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTaGAGTACCTATGGTACCTGGGACCCCAGGGACTCGGATGTGCTG +
Preference number: 1 (lower is better)
Translates to: YRVRPRLLVLSLGKS*STYGTWDPRDSDVL
Trigger: CAGCACATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTGACCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp TTGGCGGTTGTACAGGGTCAGGCCCAGGTTGCTGGTGCTGTCTCTTaGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTC +
Preference number: 1 (lower is better)
Translates to: LAVVQGQAQVAGAVS*EILQYLWYLGPQGL
Trigger: GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTGACCCTGTACAACCGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 90 bp CTCCACCTTAGGTCTGCAAGTAGAAAAACGGACACAGATAACAACTaGGTGGTCAGTGGCAGCCACATGCGGGCAGCCAGCGGCACGAGC +
Preference number: 1 (lower is better)
Translates to: LHLRSASRKTDTDNN*VVSGSHMRAASGTS
Trigger: GCTCGTGCCGCTGGCTGCCCGCATGTGGCTGCCACTGACCACTCAGTTGTTATCTGTGTCCGTTTTTCTACTTGCAGACCTAAGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 90 bp GGGCATGTCCAAAGAAGCTCCTTTTCCTGTGGCTGTGGATTTCTTTaGTCTCTGCAGCACTGGCGGTGGTTGGCCTGGGCAGTGGTTCCT +
Preference number: 1 (lower is better)
Translates to: GHVQRSSFSCGCGFL*SLQHWRWLAWAVVP
Trigger: AGGAACCACTGCCCAGGCCAACCACCGCCAGTGCTGCAGAGATCAAAGAAATCCACAGCCACAGGAAAAGGAGCTTCTTTGGACATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp ACCTTAGGTCTGCAAGTAGAAAAACGGACACAGATAACAACTGAGTaGTCAGTGGCAGCCACATGCGGGCAGCCAGCGGCACGAGCAAGG +
Preference number: 1 (lower is better)
Translates to: TLGLQVEKRTQITTE*SVAATCGQPAARAR
Trigger: CCTTGCTCGTGCCGCTGGCTGCCCGCATGTGGCTGCCACTGACCACTCAGTTGTTATCTGTGTCCGTTTTTCTACTTGCAGACCTAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp CAGTTTCTCTACCTTTGGGTACAAGAACCAAGGAGGAGGCTTGGCTaGAGGACTCTTCTGGCCCTGCCTGTCCATCCAGCTTGCTGTGAG +
Preference number: 1 (lower is better)
Translates to: QFLYLWVQEPRRRLG*RTLLALPVHPACCE
Trigger: CTCACAGCAAGCTGGATGGACAGGCAGGGCCAGAAGAGTCCTCCAGCCAAGCCTCCTCCTTGGTTCTTGTACCCAAAGGTAGAGAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp CTGCCCCAGGCTCAGACCCAAGAAGACCTGCAGTTTCTCTACCTTTaGGTACAAGAACCAAGGAGGAGGCTTGGCTGGAGGACTCTTCTG +
Preference number: 1 (lower is better)
Translates to: LPQAQTQEDLQFLYL*VQEPRRRLGWRTLL
Trigger: CAGAAGAGTCCTCCAGCCAAGCCTCCTCCTTGGTTCTTGTACCCAAAGGTAGAGAAACTGCAGGTCTTCTTGGGTCTGAGCCTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 90 bp GAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTTaGATTCAGCCACTGAACACAGGAGCCAGGAGCTTGGAGTCTGGG +
Preference number: 1 (lower is better)
Translates to: EEFLQAGAHIPNLGR*IQPLNTGARSLESG
Trigger: CCCAGACTCCAAGCTCCTGGCTCCTGTGTTCAGTGGCTGAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp GAATGTGGCTCCAGCACCTCACTTGGTTTTGGCTTCCTCCTTGTATaGACATTGAGCAGAGATCTTGGCTGGGGGCCAAGGGTGTTGACC +
Preference number: 1 (lower is better)
Translates to: ECGSSTSLGFGFLLV*TLSRDLGWGPRVLT
Trigger: GGTCAACACCCTTGGCCCCCAGCCAAGATCTCTGCTCAATGTCCATACAAGGAGGAAGCCAAAACCAAGTGAGGTGCTGGAGCCACATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp GTCGCAACCTTCAGAACCCCAGGAAGATCAGCTTTAGGAACTCCCTaGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTG +
Preference number: 1 (lower is better)
Translates to: VATFRTPGRSALGTP*QVKRAVPIIPASSL
Trigger: CAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGTTCTGAAGGTTGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp GGCTATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTaGGCATGTCCAAAGAAGCTCCTTTTCCTGTGGCTGTGGATTTCT +
Preference number: 1 (lower is better)
Translates to: GYVRAVPVPPGTVWS*ACPKKLLFLWLWIS
Trigger: AGAAATCCACAGCCACAGGAAAAGGAGCTTCTTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 90 bp GGTGCCCTTGACCTGGTATCTGCTTGTTCCCTTTCTCAGGGCATTTaGGAGACATGGCTTCTAGGCTCAAGCTGCCAGGAGTCCATGTGT +
Preference number: 1 (lower is better)
Translates to: GALDLVSACSLSQGI*ETWLLGSSCQESMC
Trigger: ACACATGGACTCCTGGCAGCTTGAGCCTAGAAGCCATGTCTCTCAAATGCCCTGAGAAAGGGAACAAGCAGATACCAGGTCAAGGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp CTTGCTGTGAGAGGTCTGGGGAGCACTGCCGTCTCTGATGTCAGATaGGCATTAGCATTCTTGGTTTGTCTGCTTCCCAGGACTGTTGTG +
Preference number: 1 (lower is better)
Translates to: LAVRGLGSTAVSDVR*ALAFLVCLLPRTVV
Trigger: CACAACAGTCCTGGGAAGCAGACAAACCAAGAATGCTAATGCCCATCTGACATCAGAGACGGCAGTGCTCCCCAGACCTCTCACAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp GGCAGCTGTGGCGACAGTTGGATCAGCTTTCATCCACATCAGAGCTaGCCTGCCCCAAGATTATCAACCACATTTGAATGTGGCTCCAGC +
Preference number: 1 (lower is better)
Translates to: GSCGDSWISFHPHQS*PAPRLSTTFECGSS
Trigger: GCTGGAGCCACATTCAAATGTGGTTGATAATCTTGGGGCAGGCCAGCTCTGATGTGGATGAAAGCTGATCCAACTGTCGCCACAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp ATGGGACGTCACAATGGCAAAGAGCCTAGTATAAAAATTGGAGGATaGGGTGGGGCAGCAGAGTGGGTTAGCAGCATCCAGAGCTGGGCT +
Preference number: 1 (lower is better)
Translates to: MGRHNGKEPSIKIGG*GGAAEWVSSIQSWA
Trigger: AGCCCAGCTCTGGATGCTGCTAACCCACTCTGCTGCCCCACCCCATCCTCCAATTTTTATACTAGGCTCTTTGCCATTGTGACGTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR GCA 90 bp CTAGGGTGGGACTTCAGTCGTCTCTTGCTCTCATCTCCCTCTTCTTaGCTGGAAGGACCCACAGATATCGAACCTCTAGCTGTCCATGTA +
Preference number: 1 (lower is better)
Translates to: LGWDFSRLLLSSPSS*LEGPTDIEPLAVHV
Trigger: TACATGGACAGCTAGAGGTTCGATATCTGTGGGTCCTTCCAGGCAAGAAGAGGGAGATGAGAGCAAGAGACGACTGAAGTCCCACCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR GCA 90 bp GCCAACACTAGGAGGCACAAACCACAATGCCTGGAGAAGAGTTTCTaGAGGCTGGAGCCCATATTCCGAATCTCGGACGTTGAATTCAGC +
Preference number: 1 (lower is better)
Translates to: ANTRRHKPQCLEKSF*RLEPIFRISDVEFS
Trigger: GCTGAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTCCAGGCATTGTGGTTTGTGCCTCCTAGTGTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR GCA 90 bp CCCTCTTTTCATGAGGGAGCCAACACTAGGAGGCACAAACCACAATaGCTGGAGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATC +
Preference number: 1 (lower is better)
Translates to: PSFHEGANTRRHKPQ*LEKSFCRLEPIFRI
Trigger: GATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTCCAGGCATTGTGGTTTGTGCCTCCTAGTGTTGGCTCCCTCATGAAAAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp CTTTTCATGAGGGAGCCAACACTAGGAGGCACAAACCACAATGCCTaGAGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGG +
Preference number: 1 (lower is better)
Translates to: LFMREPTLGGTNHNA*RRVSAGWSPYSESR
Trigger: CCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTCCAGGCATTGTGGTTTGTGCCTCCTAGTGTTGGCTCCCTCATGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 90 bp GGAAGGACCCACAGATATCGAACCTCTAGCTGTCCATGTAAGGGCTaGAATGAACCTGGTGCCCTTGACCTGGTATCTGCTTGTTCCCTT +
Preference number: 1 (lower is better)
Translates to: GRTHRYRTSSCPCKG*NEPGALDLVSACSL
Trigger: AAGGGAACAAGCAGATACCAGGTCAAGGGCACCAGGTTCATTTCAGCCCTTACATGGACAGCTAGAGGTTCGATATCTGTGGGTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp CTAGCTGTCCATGTAAGGGCTGAAATGAACCTGGTGCCCTTGACCTaGTATCTGCTTGTTCCCTTTCTCAGGGCATTTGAGAGACATGGC +
Preference number: 1 (lower is better)
Translates to: LAVHVRAEMNLVPLT*YLLVPFLRAFERHG
Trigger: GCCATGTCTCTCAAATGCCCTGAGAAAGGGAACAAGCAGATACCAGGTCAAGGGCACCAGGTTCATTTCAGCCCTTACATGGACAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 90 bp CTAGGAGGCACAAACCACAATGCCTGGAGAAGAGTTTCTGCAGGCTaGAGCCCATATTCCGAATCTCGGACGTTGAATTCAGCCACTGAA +
Preference number: 1 (lower is better)
Translates to: LGGTNHNAWRRVSAG*SPYSESRTLNSATE
Trigger: TTCAGTGGCTGAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTCCAGGCATTGTGGTTTGTGCCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 90 bp TCATCCACATCAGAGCTGGCCTGCCCCAAGATTATCAACCACATTTaGATGTGGCTCCAGCACCTCACTTGGTTTTGGCTTCCTCCTTGT +
Preference number: 1 (lower is better)
Translates to: SSTSELACPKIINHI*MWLQHLTWFWLPPC
Trigger: ACAAGGAGGAAGCCAAAACCAAGTGAGGTGCTGGAGCCACATTCAAATGTGGTTGATAATCTTGGGGCAGGCCAGCTCTGATGTGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 90 bp AGTGGCAGCCACATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTaGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: SGSHMRAASGTSKVP*VSGSHKGPGFGEAL
Trigger: CAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCATGTGGCTGCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR GCA 90 bp GGATCCCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTGGGTCTGGGGAGGGGCCACTAGGTGGTTaGCGGCGCAGGGCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: GSLVQDGSLYACLGGSGEGPLGG*RRRARQ
Trigger: CTGCCTAGCCCTGCGCCGGCAACCACCTAGTGGCCC...CTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 90 bp CGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTaGGGGAGGCCCTGGTTGGTGCCCTTGGGGTTGCCTGCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: RARSLWSVAATKAQA*GRPWLVPLGLPAWF
Trigger: AAACCAGGCAGGCAACCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 90 bp CCAGCCAGGGGAGCAGCGGACCCAGCTGGGCAGCTGTGGCGACAGTaGGATCAGCTTTCATCCACATCAGAGCTGGCCTGCCCCAAGATT +
Preference number: 2 (lower is better)
Translates to: PARGAADPAGQLWRQ*DQLSSTSELACPKI
Trigger: AATCTTGGGGCAGGCCAGCTCTGATGTGGATGAAAGCTGATCCAACTGTCGCCACAGCTGCCCAGCTGGGTCCGCTGCTCCCCTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp GGATCCCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTGGGTCTGGGGAGGGTCCCTTTGGTCAGTaGCAGCCACAAAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: GSLVQDGSLYACLGGSGEGPFGQ*QPQRPR
Trigger: CCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACC...CTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 90 bp AGCTGGGCTTTATCCAGCCCTAGGCCTCAGGGCATCACCTTTGCCTaGGGACGAGAGGAGAGTGGTTTGGGCAGGATGTGGACCCTCTGG +
Preference number: 2 (lower is better)
Translates to: SWALSSPRPQGITFA*GREESGLGRMWTLW
Trigger: CCAGAGGGTCCACATCCTGCCCAAACCACTCTCCTCTCGTCCCAAGGCAAAGGTGATGCCCTGAGGCCTAGGGCTGGATAAAGCCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAGCTTTGGGGAGGCCCTaGTTGGTGCCCTTGGGGTTG +
Preference number: 2 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPALGRP*LVPLGL
Trigger: CAACCCCAAGGGCACCAACCAGGGCCTCCCCAAAGC...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTAGCAGAGATCTTGGCTaGGGGCCAAGGGTGTTGACC +
Preference number: 2 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPSRDLG*GPRVLT
Trigger: GGTCAACACCCTTGGCCCCCAGCCAAGATCTCTGCT...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 90 bp ATGTCCTTCTCACAAGCCTGGGCGGGGCTCGTGATGGTTTGGCGGTaGTACAGGGTCAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAA +
Preference number: 2 (lower is better)
Translates to: MSFSQAWAGLVMVWR*YRVRPRLLVLSLGK
Trigger: TTTCCCAAGAGACAGCACCAGCAACCTGGGCCTGACCCTGTACAACCGCCAAACCATCACGAGCCCCGCCCAGGCTTGTGAGAAGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGCACAGCCGGGATCCCTaGTCCAGGATGGCAGCCTAT +
Preference number: 2 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRHSRDP*SRMAAY
Trigger: ATAGGCTGCCATCCTGGACCAGGGATCCCGGCTGTG...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 90 bp GTACAGGGTCAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTaGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGATGTGCT +
Preference number: 2 (lower is better)
Translates to: VQGQAQVAGAVSWEI*QYLWYLGPQGLGCA
Trigger: AGCACATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTGACCCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR TCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTGACACAGATAACAACTaGGTGGTCAGTGGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPDTDNN*VVSGSH
Trigger: GTGGCTGCCACTGACCACTCAGTTGTTATCTGTGTC...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR GCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTGCCCTTGGGGTTGCCTaGCTGGTTTCGGCAATAAAT +
Preference number: 2 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPALGVA*LVSAIN
Trigger: ATTTATTGCCGAAACCAGGCAGGCAACCCCAAGGGC...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR GCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCGGACTCTTCTGGCCCTaGCTGTCCATCCAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: SFLRACSALRNHVGSSSAGLFWP*LSIQLA
Trigger: AGCAAGCTGGATGGACAGGCAGGGCCAGAAGAGTCC...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCATTATCGGCCTTCCCTaGGCCACTAGGTGGTTGCCG +
Preference number: 2 (lower is better)
Translates to: SFLRACSALRNHVGSSSAIIGLP*ATRWLP
Trigger: CGGCAACCACCTAGTGGCCCAGGGAAGGCCGATAAT...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCAGGCTGGGGCAGGCTaGGTTCTAGGGTGGGACTTC +
Preference number: 2 (lower is better)
Translates to: QAQVAGAVSWEILQYLWYQAGAG*VLGWDF
Trigger: GAAGTCCCACCCTAGAACCCAGCCTGCCCCAGCCTG...GTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 90 bp TTTGGCGGTTGTACAGGGTCAGGCCCAGGTTGCTGGTGCTGTCTCTaGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACT +
Preference number: 2 (lower is better)
Translates to: FGGCTGSGPGCWCCL*GNLAVPMVPGTPGT
Trigger: AGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTGACCCTGTACAACCGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR TCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGAGCACTGCCGTCTCTaGTGTCAGATGGGCATTAGC +
Preference number: 2 (lower is better)
Translates to: WVKGKVLIHACPSHKPGREHCRL*CQMGIS
Trigger: GCTAATGCCCATCTGACATCAGAGACGGCAGTGCTC...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR TCA 90 bp GCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGTGCACCACACTGCTaGGACCTCACTGTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: AVSWEILQYLWYLGPQGLGAPHC*DLTVSL
Trigger: AAGGCTGACAGTGAGGTCTCAGCAGTGTGGTGCACC...GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR GCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTTGGTGCCCTTGGGGTTaGCTGCCTGGTTTCGGCAAT +
Preference number: 2 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTWCPWG*LPGFGN
Trigger: ATTGCCGAAACCAGGCAGGCAACCCCAAGGGCACCA...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR GCA 90 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACGGCAGCCTATATGCCTaGCTAGGTGGGTCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: QAQVAGAVSWEILQYLWYGSLYA*LGGSGE
Trigger: CTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCC...GTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR GCA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAACTCAGGGGCATGACTaGAAAGGCACAGCCCTTTCC +
Preference number: 2 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPTQGHD*KGTALS
Trigger: GGAAAGGGCTGTGCCTTTGCAGTCATGCCCCTGAGT...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp TTCTCCAGGTGTGACTGGCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTCTCTCCAAAGGGGATTaGACGTTCGACTCCACCAGT +
Preference number: 2 (lower is better)
Translates to: FSRCDWHLPSVTGLVSAPLSKGD*TFDSTS
Trigger: ACTGGTGGAGTCGAACGTCCAATCCCCTTTGGAGAG...AGGTGCCGAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR-3UTR CCA 90 bp AAAGGGAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGTGACCCTGCCGAGTGTGACTaGCTTAGTCTCGGCACCTTG +
Preference number: 2 (lower is better)
Translates to: KGRSLMSGQSSASFSRCDPAECD*LSLGTL
Trigger: CAAGGTGCCGAGACTAAGCCAGTCACACTCGGCAGG...GTCACACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR CAA 90 bp ACCTGCAGTTTCTCTACCTTTGGGTACAAGAACCAAGGAGGAGGCTaGGCTGGAGGACTCTTCTGGCCCTGCCTGTCCATCCAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: TCSFSTFGYKNQGGG*AGGLFWPCLSIQLA
Trigger: AGCAAGCTGGATGGACAGGCAGGGCCAGAAGAGTCCTCCAGCCAAGCCTCCTCCTTGGTTCTTGTACCCAAAGGTAGAGAAACTGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR TCA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGCTTTCTCAGGGCATTTaGGAGACATGGCTTCTAGGC +
Preference number: 2 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSLSQGI*ETWLLG
Trigger: GCCTAGAAGCCATGTCTCTCAAATGCCCTGAGAAAG...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAAATATGCCTGCCTAGGTaGGTCTGGGGAGTGGTTAAG +
Preference number: 2 (lower is better)
Translates to: CKGCASSPWDSLELGMSKICLPR*VWGVVK
Trigger: CTTAACCACTCCCCAGACCCACCTAGGCAGGCATAT...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp GAGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTTGAATTCGGGACTCGGATGTGCTaGGGAGGGGTGCACCACACT +
Preference number: 2 (lower is better)
Translates to: EKSFCRLEPIFRISDVEFGTRMC*GGVHHT
Trigger: AGTGTGGTGCACCCCTCCCCAGCACATCCGAGTCCC...GAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGTCAGGCCCAGGTTGCTaGTGCTGTCTCTTGGGAAAT +
Preference number: 2 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRSGPGC*CCLLGN
Trigger: ATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTGA...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR TCA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGTTTTTCCAGAGGGTGTaGCTTCCATCAAGTCGGTAC +
Preference number: 2 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSFFQRV*LPSSRY
Trigger: GTACCGACTTGATGGAAGTCACACCCTCTGGAAAAA...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR GCA 90 bp GCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGTACCTATTTTCCCTaGCATAAGGCCCCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: AVSWEILQYLWYLGPQGLGTYFP*HKAPSS
Trigger: GGAAGAGGGGGCCTTATGGCAGGGAAAATAGGTACC...GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR GCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCCTTCTAGGCTCAAGCTaGCAGGAGTCCATGTGTATG +
Preference number: 2 (lower is better)
Translates to: SFLRACSALRNHVGSSSALLGSS*QESMCM
Trigger: CATACACATGGACTCCTGGCAGCTTGAGCCTAGAAG...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR GCA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGCATTCTTGGTTTGTCTaGTTCCCAGGACTGTTGTGG +
Preference number: 2 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSHSWFV*FPGLLW
Trigger: CCACAACAGTCCTGGGAAGCAGACAAACCAAGAATG...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACGGCTGGGTTCTAGGGTaGGACTTCAGTCGTCTCTTG +
Preference number: 2 (lower is better)
Translates to: QAQVAGAVSWEILQYLWYGWVLG*DFSRLL
Trigger: CAAGAGACGACTGAAGTCCCACCCTAGAACCCAGCC...GTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 90 bp AGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTaGAATTCAGCCACTGAACACAGGAGCCAGGAGCTTGGAGTCTGG +
Preference number: 2 (lower is better)
Translates to: RRVSAGWSPYSESRT*NSATEHRSQELGVW
Trigger: CCAGACTCCAAGCTCCTGGCTCCTGTGTTCAGTGGCTGAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR GCA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAAAGACCCAAGAAGACCTaGAGTTTCTCTACCTTTGGG +
Preference number: 2 (lower is better)
Translates to: CKGCASSPWDSLELGMSKRPKKT*SFSTFG
Trigger: CCCAAAGGTAGAGAAACTGCAGGTCTTCTTGGGTCT...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTCCCTCTTCTTGCCTaGAAGGACCCACAGATATCG +
Preference number: 2 (lower is better)
Translates to: QAQVAGAVSWEILQYLWYLPLLA*KDPQIS
Trigger: CGATATCTGTGGGTCCTTCCAGGCAAGAAGAGGGAG...GTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTCATCCACATCAGAGCTaGCCTGCCCCAAGATTATCA +
Preference number: 2 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTHPHQS*PAPRLS
Trigger: TGATAATCTTGGGGCAGGCCAGCTCTGATGTGGATG...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 90 bp TCTAGGGTGGGACTTCAGTCGTCTCTTGCTCTCATCTCCCTCTTCTaGCCTGGAAGGACCCACAGATATCGAACCTCTAGCTGTCCATGT +
Preference number: 2 (lower is better)
Translates to: SRVGLQSSLALISLF*PGRTHRYRTSSCPC
Trigger: ACATGGACAGCTAGAGGTTCGATATCTGTGGGTCCTTCCAGGCAAGAAGAGGGAGATGAGAGCAAGAGACGACTGAAGTCCCACCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp TCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGATACAACCAGTATCTCTTaGGGTAGGTGGTGGGAGACT +
Preference number: 2 (lower is better)
Translates to: SLGKSCSTYGTWDPRDSDTTSIS*GRWWET
Trigger: AGTCTCCCACCACCTACCCCAAGAGATACTGGTTGT...ATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCAGAGTTTCTGCAGGCTaGAGCCCATATTCCGAATCT +
Preference number: 2 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPRVSAG*SPYSES
Trigger: AGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCT...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTCACCTCACTTGGTTTTaGCTTCCTCCTTGTATGGAC +
Preference number: 2 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTHLTWF*LPPCMD
Trigger: GTCCATACAAGGAGGAAGCCAAAACCAAGTGAGGTG...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CCA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCCTGGTGCCCTTGACCTaGTATCTGCTTGTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSLVPLT*YLLVPF
Trigger: AAAGGGAACAAGCAGATACCAGGTCAAGGGCACCAG...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 90 bp GAACCTCTAGCTGTCCATGTAAGGGCTGAAATGAACCTGGTGCCCTaGACCTGGTATCTGCTTGTTCCCTTTCTCAGGGCATTTGAGAGA +
Preference number: 2 (lower is better)
Translates to: EPLAVHVRAEMNLVP*TWYLLVPFLRAFER
Trigger: TCTCTCAAATGCCCTGAGAAAGGGAACAAGCAGATACCAGGTCAAGGGCACCAGGTTCATTTCAGCCCTTACATGGACAGCTAGAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 90 bp TTCATCCACATCAGAGCTGGCCTGCCCCAAGATTATCAACCACATTaGAATGTGGCTCCAGCACCTCACTTGGTTTTGGCTTCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: FIHIRAGLPQDYQPH*NVAPAPHLVLASSL
Trigger: CAAGGAGGAAGCCAAAACCAAGTGAGGTGCTGGAGCCACATTCAAATGTGGTTGATAATCTTGGGGCAGGCCAGCTCTGATGTGGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR GCA 90 bp CCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGGTCCATGTGTATGTGTaGTGGAGAGTTAAGAGTTCT +
Preference number: 2 (lower is better)
Translates to: PGCWCCLLGNLAVPMVPGVHVYV*WRVKSS
Trigger: AGAACTCTTAACTCTCCAGCACACATACACATGGAC...CCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTaGTTGGTGCCCTTGGGGTTGCCTGCCTGGTTTCGG +
Preference number: 3 (lower is better)
Translates to: VAATKAQALGRP*LVPLGLPAWFR
Trigger: CCGAAACCAGGCAGGCAACCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp GGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTaGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCT +
Preference number: 3 (lower is better)
Translates to: GSQRHEQGPFGQ*QPQRPRLWGGP
Trigger: AGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp CCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTaGGGAGGCCCTGGTTGGTGCCCTTGGGGTTGCCTG +
Preference number: 3 (lower is better)
Translates to: PFGQWQPQRPRL*GGPGWCPWGCL
Trigger: CAGGCAACCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp CAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTaGTGCCCTTGGGGTTGCCTGCCTGGTTTCGGCAAT +
Preference number: 3 (lower is better)
Translates to: QPQRPRLWGGPG*CPWGCLPGFGN
Trigger: ATTGCCGAAACCAGGCAGGCAACCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp CCTATGGTACCTGGGACCCCAGGGACTCGGATGTGCTaGGGAGGGGTGCACCACACTGCTGAGACCTCACTG +
Preference number: 3 (lower is better)
Translates to: PMVPGTPGTRMC*GGVHHTAETSL
Trigger: CAGTGAGGTCTCAGCAGTGTGGTGCACCCCTCCCCAGCACATCCGAGTCCCTGGGGTCCCAGGTACCATAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp GACTGCAAAGGCACAGCCGGGATCCCTGGTCCAGGATaGCAGCCTATATGCCTGCCTAGGTGGGTCTGGGGA +
Preference number: 3 (lower is better)
Translates to: DCKGTAGIPGPG*QPICLPRWVWG
Trigger: TCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCCCGGCTGTGCCTTTGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp GAGCAGCGGACCCAGCTGGGCAGCTGTGGCGACAGTTaGATCAGCTTTCATCCACATCAGAGCTGGCCTGCC +
Preference number: 3 (lower is better)
Translates to: EQRTQLGSCGDS*ISFHPHQSWPA
Trigger: GGCAGGCCAGCTCTGATGTGGATGAAAGCTGATCCAACTGTCGCCACAGCTGCCCAGCTGGGTCCGCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp GGTGGGGCAGCAGAGTGGGTTAGCAGCATCCAGAGCTaGGCTTTATCCAGCCCTAGGCCTCAGGGCATCACC +
Preference number: 3 (lower is better)
Translates to: GGAAEWVSSIQS*ALSSPRPQGIT
Trigger: GGTGATGCCCTGAGGCCTAGGGCTGGATAAAGCCCAGCTCTGGATGCTGCTAACCCACTCTGCTGCCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTTTGGTGCCCTTGGGGTaGCCTGCCTGGTTTCGGCAA +
Preference number: 3 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPLVPLG*PAWFRQ
Trigger: TTGCCGAAACCAGGCAGGCAACCCCAAGGGCACCAA...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTGTGATGGTTTGGCGGTaGTACAGGGTCAGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPVMVWR*YRVRPR
Trigger: CCTGGGCCTGACCCTGTACAACCGCCAAACCATCAC...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 72 bp CATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGTaGTGGTTTGGCGGTTGTACAGGGTCAGGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: HACPSHKPGRGS*WFGGCTGSGPG
Trigger: ACCTGGGCCTGACCCTGTACAACCGCCAAACCATCACGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp AGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGTGACTaGCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCA +
Preference number: 3 (lower is better)
Translates to: SGQSSASFSRCD*HLPSVTGLVSA
Trigger: TGCCGAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAAGGAGGCTGAGCTCTGCCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR TCA 72 bp GACTCGGATGTGCTGGGGAGGGGTGCACCACACTGCTaGGACCTCACTGTCAGCCTTCCAGCTGTTCACATC +
Preference number: 3 (lower is better)
Translates to: DSDVLGRGAPHC*DLTVSLPAVHI
Trigger: GATGTGAACAGCTGGAAGGCTGACAGTGAGGTCTCAGCAGTGTGGTGCACCCCTCCCCAGCACATCCGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 72 bp GATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGTaGCTGGCACCTGCCGAGTGTGACTGGCTTAGTCTC +
Preference number: 3 (lower is better)
Translates to: DEWAELSLLLQV*LAPAECDWLSL
Trigger: GAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR GCA 72 bp CCGGGATCCCTGGTCCAGGATGGCAGCCTATATGCCTaGCTAGGTGGGTCTGGGGAGTGGTTAAGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: PGSLVQDGSLYA*LGGSGEWLSFL
Trigger: GAGGAAACTTAACCACTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp CCAGGATGGCAGCCTATATGCCTGCCTAGGTGGGTCTaGGGAGTGGTTAAGTTTCCTCTTCCCAGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: PGWQPICLPRWV*GVVKFPLPRGR
Trigger: CCTGCCCCTGGGAAGAGGAAACTTAACCACTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp GGGGGTGGGCTATGTAAGGGCTGTGCCAGTTCCCCCTaGGACAGTTTGGAGCTGGGCATGTCCAAAGAAGCT +
Preference number: 3 (lower is better)
Translates to: GGGLCKGCASSP*DSLELGMSKEA
Trigger: AGCTTCTTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATAGCCCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCAGGGTCAGGCCCAGGTaGCTGGTGCTGTCTCTTGGG +
Preference number: 3 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPRVRPR*LVLSLG
Trigger: CCCAAGAGACAGCACCAGCAACCTGGGCCTGACCCT...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp TCCTTCTCCAGGTGTGACTGGCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTCTCCAAAGGGGATaGGACGTTCGACTCCACCAG +
Preference number: 3 (lower is better)
Translates to: SFSRCDWHLPSVTGLVSAPLQRG*DVRLHQ
Trigger: CTGGTGGAGTCGAACGTCCAATCCCCTTTGGAGAGG...TGCCGAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR-3UTR CAA 90 bp TCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGATCCCTGGTTGGTGCCCTaGGGGTTGCCTGCCTGGTTT +
Preference number: 3 (lower is better)
Translates to: SLGKSCSTYGTWDPRDSDPWLVP*GLPAWF
Trigger: AAACCAGGCAGGCAACCCCAAGGGCACCAACCAGGG...ATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACACAAAGGCCCAGGCTTaGGGGAGGCCCTGGTTGGTG +
Preference number: 3 (lower is better)
Translates to: QAQVAGAVSWEILQYLWYTKAQA*GRPWLV
Trigger: CACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGT...GTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR GCA 72 bp ACAGCCGGGATCCCTGGTCCAGGATGGCAGCCTATATaGCTGCCTAGGTGGGTCTGGGGAGTGGTTAAGTTT +
Preference number: 3 (lower is better)
Translates to: TAGIPGPGWQPI*LPRWVWGVVKF
Trigger: AAACTTAACCACTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCCCGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR GCA 72 bp AGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTaGAGTACCTATGGTACCTGGGACCCCAGGGACTCG +
Preference number: 3 (lower is better)
Translates to: RPRLLVLSLGKS*STYGTWDPRDS
Trigger: CGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR GCA 72 bp GAGAAGCAGATGGGTCAAGGGCAAGGTCTTGATCCATaGATGTCCTTCTCACAAGCCTGGGCGGGGCTCGTG +
Preference number: 3 (lower is better)
Translates to: EKQMGQGQGLDP*MSFSQAWAGLV
Trigger: CACGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCATCTGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp CCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTaGGTCTGGGGAGTGGTTAAGTTTCCTCTTCCCAGG +
Preference number: 3 (lower is better)
Translates to: PGPGWQPICLPR*VWGVVKFPLPR
Trigger: CCTGGGAAGAGGAAACTTAACCACTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp GCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATaGTACCTGGGACCCCAGGGACTCGGATGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: AGAVSWEILQYL*YLGPQGLGCAG
Trigger: CCCAGCACATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp AGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTaGGCATGTCCAAAGAAGCTCCTTTTCCTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: RAVPVPPGTVWS*ACPKKLLFLWL
Trigger: CAGCCACAGGAAAAGGAGCTTCTTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTAACCAAGGAGGAGGCTaGGCTGGAGGACTCTTCTGG +
Preference number: 3 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTNQGGG*AGGLFW
Trigger: CCAGAAGAGTCCTCCAGCCAAGCCTCCTCCTTGGTT...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCGGGGAGGGGTCCTCATaGTTCCCTCTTTCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPGEGSS*FPLSGS
Trigger: AGACCCAGAAAGAGGGAACAATGAGGACCCCTCCCC...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 72 bp CACCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTTaGCATGTCCCTCTCCAAAGGGGATTGGACGTTCGA +
Preference number: 3 (lower is better)
Translates to: HLPSVTGLVSAP*HVPLQRGLDVR
Trigger: TCGAACGTCCAATCCCCTTTGGAGAGGGACATGTCAAGGTGCCGAGACTAAGCCAGTCACACTCGGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR CCA 72 bp GTACAGGGTCAGGCCCAGGTTGCTGGTGCTGTCTCTTaGGAAATCTTGCAGTACCTATGGTACCTGGGACCC +
Preference number: 3 (lower is better)
Translates to: VQGQAQVAGAVS*EILQYLWYLGP
Trigger: GGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTGACCCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp CAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTaGGCGGGGCTCGTGATGGTTTGGCGGTTGTACAGG +
Preference number: 3 (lower is better)
Translates to: QGLDPCMSFSQA*AGLVMVWRLYR
Trigger: CCTGTACAACCGCCAAACCATCACGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp CATCATACCAGCATCCAGCCTGGACCTACTGTTCCCTaGATGGGGAGAGTGGCTCAGCTCTTTCCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: HHTSIQPGPTVP*MGRVAQLFPLG
Trigger: TCCCAGAGGAAAGAGCTGAGCCACTCTCCCCATCCAGGGAACAGTAGGTCCAGGCTGGATGCTGGTATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCCTCATCTCCCTCTTCTaGCCTGGAAGGACCCACAGA +
Preference number: 3 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPLISLF*PGRTHR
Trigger: TCTGTGGGTCCTTCCAGGCAAGAAGAGGGAGATGAG...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCACAGCTGTGGCGACAGTaGGATCAGCTTTCATCCACA +
Preference number: 3 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPQLWRQ*DQLSST
Trigger: TGTGGATGAAAGCTGATCCAACTGTCGCCACAGCTG...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 72 bp CTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTTaGATTCAGCCACTGAACACAGGAGCCAGGAGCTTG +
Preference number: 3 (lower is better)
Translates to: LQAGAHIPNLGR*IQPLNTGARSL
Trigger: CAAGCTCCTGGCTCCTGTGTTCAGTGGCTGAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR GCA 72 bp TTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGTTGCCTaGCTGGTTTCGGCAATAAATAACATGAGGACCCAA +
Preference number: 3 (lower is better)
Translates to: FGEALVGALGVA*LVSAINNMRTQ
Trigger: TTGGGTCCTCATGTTATTTATTGCCGAAACCAGGCAGGCAACCCCAAGGGCACCAACCAGGGCCTCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp GATCTCTGCAGCACTGGCGGTGGTTGGCCTGGGCAGTaGTTCCTAGAATTTGGTCTCATTAACCTAGGTCGC +
Preference number: 3 (lower is better)
Translates to: DLCSTGGGWPGQ*FLEFGLINLGR
Trigger: GCGACCTAGGTTAATGAGACCAAATTCTAGGAACCACTGCCCAGGCCAACCACCGCCAGTGCTGCAGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCACCTTTCTCAGGGCATTaGAGAGACATGGCTTCTAGG +
Preference number: 3 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPPFSGH*RDMASR
Trigger: CCTAGAAGCCATGTCTCTCAAATGCCCTGAGAAAGG...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGGCAGTTTCTCTACCTTaGGGTACAAGAACCAAGGAG +
Preference number: 3 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSAVSLP*GTRTKE
Trigger: CTCCTTGGTTCTTGTACCCAAAGGTAGAGAAACTGC...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAACTCCTTGTATGGACATaGAGCAGAGATCTTGGCTGG +
Preference number: 3 (lower is better)
Translates to: CKGCASSPWDSLELGMSKLLVWT*SRDLGW
Trigger: CCAGCCAAGATCTCTGCTCAATGTCCATACAAGGAG...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR GCA 72 bp CATGAGGGAGCCAACACTAGGAGGCACAAACCACAATaGCTGGAGAAGAGTTTCTGCAGGCTGGAGCCCATA +
Preference number: 3 (lower is better)
Translates to: HEGANTRRHKPQ*LEKSFCRLEPI
Trigger: TATGGGCTCCAGCCTGCAGAAACTCTTCTCCAGGCATTGTGGTTTGTGCCTCCTAGTGTTGGCTCCCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp GCTCAGACCCAAGAAGACCTGCAGTTTCTCTACCTTTaGGTACAAGAACCAAGGAGGAGGCTTGGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: AQTQEDLQFLYL*VQEPRRRLGWR
Trigger: CCTCCAGCCAAGCCTCCTCCTTGGTTCTTGTACCCAAAGGTAGAGAAACTGCAGGTCTTCTTGGGTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp TGGTTTGGCGGTTGTACAGGGTCAGGCCCAGGTTGCTaGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATG +
Preference number: 3 (lower is better)
Translates to: WFGGCTGSGPGC*CCLLGNLAVPM
Trigger: CATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTGACCCTGTACAACCGCCAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp TCCAGCACCTCACTTGGTTTTGGCTTCCTCCTTGTATaGACATTGAGCAGAGATCTTGGCTGGGGGCCAAGG +
Preference number: 3 (lower is better)
Translates to: SSTSLGFGFLLV*TLSRDLGWGPR
Trigger: CCTTGGCCCCCAGCCAAGATCTCTGCTCAATGTCCATACAAGGAGGAAGCCAAAACCAAGTGAGGTGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp TCTCGGCACCTTGACATGTCCCTCTCCAAAGGGGATTaGACGTTCGACTCCACCAGTCAGACTTTAGTCCAG +
Preference number: 3 (lower is better)
Translates to: SRHLDMSLSKGD*TFDSTSQTLVQ
Trigger: CTGGACTAAAGTCTGACTGGTGGAGTCGAACGTCCAATCCCCTTTGGAGAGGGACATGTCAAGGTGCCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR-3UTR CAA 90 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACTGGGAGAGGACTTTATaGCACAGCCCTTTCCTCCCT +
Preference number: 3 (lower is better)
Translates to: QAQVAGAVSWEILQYLWYWERTL*HSPFLP
Trigger: AGGGAGGAAAGGGCTGTGCAATAAAGTCCTCTCCCA...GTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAGTCTCTTGGGAAATCTaGCAGTACCTATGGTACCTG +
Preference number: 3 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPVSWEI*QYLWYL
Trigger: CAGGTACCATAGGTACTGCAAGATTTCCCAAGAGAC...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR-3UTR CAA 90 bp GTAAAAGGGAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGTCTTAGTCTCGGCACCTaGACATGTCCCTCTCCAAAG +
Preference number: 3 (lower is better)
Translates to: VKGRSLMSGQSSASFSRCLSLGT*TCPSPK
Trigger: CTTTGGAGAGGGACATGTCAAGGTGCCGAGACTAAG...ACACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTCCCTTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR TCA 72 bp GACCTGGTATCTGCTTGTTCCCTTTCTCAGGGCATTTaGGAGACATGGCTTCTAGGCTCAAGCTGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: DLVSACSLSQGI*ETWLLGSSCQE
Trigger: CTCCTGGCAGCTTGAGCCTAGAAGCCATGTCTCTCAAATGCCCTGAGAAAGGGAACAAGCAGATACCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 72 bp CAGTCTGGAAAGTGGGCTTACAGCAACTTCCTCTGGTaGTTGGGAGCCCATCTGAGAAGCAGATGGGTCAAG +
Preference number: 3 (lower is better)
Translates to: QSGKWAYSNFLW*LGAHLRSRWVK
Trigger: CTTGACCCATCTGCTTCTCAGATGGGCTCCCAATCACCAGAGGAAGTTGCTGTAAGCCCACTTTCCAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR GCA 72 bp AGGAGGCACAAACCACAATGCCTGGAGAAGAGTTTCTaGAGGCTGGAGCCCATATTCCGAATCTCGGACGTT +
Preference number: 3 (lower is better)
Translates to: RRHKPQCLEKSF*RLEPIFRISDV
Trigger: AACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTCCAGGCATTGTGGTTTGTGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp TGGCTTCCTCCTTGTATGGACATTGAGCAGAGATCTTaGCTGGGGGCCAAGGGTGTTGACCCTCTTTTCATG +
Preference number: 3 (lower is better)
Translates to: WLPPCMDIEQRS*LGAKGVDPLFM
Trigger: CATGAAAAGAGGGTCAACACCCTTGGCCCCCAGCCAAGATCTCTGCTCAATGTCCATACAAGGAGGAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp TCTGCTTCCCAGGACTGTTGTGGCCATCAAGTGAGATaGCCTGTACAGGGCCTAGAACACGTAGTATTTGCT +
Preference number: 3 (lower is better)
Translates to: SASQDCCGHQVR*PVQGLEHVVFA
Trigger: AGCAAATACTACGTGTTCTAGGCCCTGTACAGGCCATCTCACTTGATGGCCACAACAGTCCTGGGAAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp TTCAGAACCCCAGGAAGATCAGCTTTAGGAACTCCCTaGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCA +
Preference number: 3 (lower is better)
Translates to: FRTPGRSALGTP*QVKRAVPIIPA
Trigger: TGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGTTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp TGGGCATGTCCAAAGAAGCTCCTTTTCCTGTGGCTGTaGATTTCTTTGATCTCTGCAGCACTGGCGGTGGTT +
Preference number: 3 (lower is better)
Translates to: WACPKKLLFLWL*ISLISAALAVV
Trigger: AACCACCGCCAGTGCTGCAGAGATCAAAGAAATCCACAGCCACAGGAAAAGGAGCTTCTTTGGACATGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp CACAATGGCAAAGAGCCTAGTATAAAAATTGGAGGATaGGGTGGGGCAGCAGAGTGGGTTAGCAGCATCCAG +
Preference number: 3 (lower is better)
Translates to: HNGKEPSIKIGG*GGAAEWVSSIQ
Trigger: CTGGATGCTGCTAACCCACTCTGCTGCCCCACCCCATCCTCCAATTTTTATACTAGGCTCTTTGCCATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 72 bp CACAGATATCGAACCTCTAGCTGTCCATGTAAGGGCTaGAATGAACCTGGTGCCCTTGACCTGGTATCTGCT +
Preference number: 3 (lower is better)
Translates to: HRYRTSSCPCKG*NEPGALDLVSA
Trigger: AGCAGATACCAGGTCAAGGGCACCAGGTTCATTTCAGCCCTTACATGGACAGCTAGAGGTTCGATATCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR TCA 72 bp TCAGAGCTGGCCTGCCCCAAGATTATCAACCACATTTaGATGTGGCTCCAGCACCTCACTTGGTTTTGGCTT +
Preference number: 3 (lower is better)
Translates to: SELACPKIINHI*MWLQHLTWFWL
Trigger: AAGCCAAAACCAAGTGAGGTGCTGGAGCCACATTCAAATGTGGTTGATAATCTTGGGGCAGGCCAGCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp ACAAACCACAATGCCTGGAGAAGAGTTTCTGCAGGCTaGAGCCCATATTCCGAATCTCGGACGTTGAATTCA +
Preference number: 3 (lower is better)
Translates to: TNHNAWRRVSAG*SPYSESRTLNS
Trigger: TGAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTCCAGGCATTGTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CCA 72 bp GGCGACAGTTGGATCAGCTTTCATCCACATCAGAGCTaGCCTGCCCCAAGATTATCAACCACATTTGAATGT +
Preference number: 3 (lower is better)
Translates to: GDSWISFHPHQS*PAPRLSTTFEC
Trigger: ACATTCAAATGTGGTTGATAATCTTGGGGCAGGCCAGCTCTGATGTGGATGAAAGCTGATCCAACTGTCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGGGAGCCCACGCGGCGTaGCTCCACCTCAGTGGCACC +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGGAHAA*LHLSGT
Trigger: GGTGCCACTGAGGTGGAGCCACGCCGCGTGGGCTCC...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGTCAGTGGCAGCCACATaGGGGCAGCCAGCGGCACGA +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGSVAAT*GQPAAR
Trigger: TCGTGCCGCTGGCTGCCCGCATGTGGCTGCCACTGA...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp AGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTGGCTCTGCCTCCGTGTaGCTGCCGGCAGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SGTSKVPLVSGSHKGPGFGSASV*LPAACP
Trigger: CGGGCAGGCTGCCGGCAGGCACACGGAGGCAGAGCC...AAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGGCCTCCCGAGTCCCTTaGGTCACCACCTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGASRVP*VTTLPK
Trigger: CTTCGGCAAGGTGGTGACGCAAGGGACTCGGGAGGC...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGTGTGCCAGTTCCCCCTaGGACAGTTTGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGCASSP*DSLELG
Trigger: GCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACA...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 72 bp CACATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTaGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: HMRAASGTSKVP*VSGSHKGPGFG
Trigger: CCCAAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCATGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGTGTTGTGGAGGTTCATaGGGGCTCTGCTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGCCGGS*GLCWTR
Trigger: CCTCGTCCAGCAGAGCCCTCATGAACCTCCACAACA...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp ATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAATTTCCAGGCCACGGTaGGGCCAAGAGGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: MRAASGTSKVPLVSGSHKISRPR*GQEGVG
Trigger: GCCCACCCCCTCTTGGCCTCACCGTGGCCTGGAAAT...TTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp ATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAATCTCCAGCTCCCCACTaGTGCACGCCCGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: MRAASGTSKVPLVSGSHKSPAPH*CTPASL
Trigger: CAGTGACGCGGGCGTGCAGCAGTGGGGAGCTGGAGA...TTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GGATCCCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTGGGTCTGGGGAGACTGGCACTCCTCAATaGCCAGCTGGGCACCGCGGC +
Preference number: 4 (lower is better)
Translates to: GSLVQDGSLYACLGGSGETGTPQ*PAGHRG
Trigger: GCCGCGGTGCCCAGCTGGCCATTGAGGAGTGCCAGT...CTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGTCCTTCTCACAAGCCTaGGCGGGGCTCGTGATGGTT +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGSFSQA*AGLVMV
Trigger: AACCATCACGAGCCCCGCCCAGGCTTGTGAGAAGGA...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGCAGGAGCCAGGAGCTTaGAGTCTGGGAACCCCAAGT +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGQEPGA*SLGTPS
Trigger: ACTTGGGGTTCCCAGACTCCAAGCTCCTGGCTCCTG...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGATCCACAAACGACTGTaGGAAGGCCACACCGTAGGC +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGIHKRL*EGHTVG
Trigger: GCCTACGGTGTGGCCTTCTCACAGTCGTTTGTGGAT...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGTCAGGATGGCCTTCCTaGCGGCCTCATTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGSGWPS*RPHCCG
Trigger: TCCACAACAATGAGGCCGGCAGGAAGGCCATCCTGA...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAGTGGCACCAGTGCCCTaGAGGAGCCCACGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPVAPVP*RSPRGV
Trigger: CACGCCGCGTGGGCTCCTCCAGGGCACTGGTGCCAC...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAAGCAGCGGACCCAGCTaGGCAGCTGTGGCGACAGTT +
Preference number: 4 (lower is better)
Translates to: MRAASGTSKVPLVSGSHKSSGPS*AAVATV
Trigger: AACTGTCGCCACAGCTGCCCAGCTGGGTCCGCTGCT...TTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGCTACTGTTCCCTGGATaGGGAGAGTGGCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGLLFPG*GEWLSS
Trigger: AGAGCTGAGCCACTCTCCCCATCCAGGGAACAGTAG...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAAGTTGCGTGGCACCAGTaGCCTGGAGGAGCCCACGCG +
Preference number: 4 (lower is better)
Translates to: CKGCASSPWDSLELGMSKVAWHQ*PGGAHA
Trigger: CGCGTGGGCTCCTCCAGGGCACTGGTGCCACGCAAC...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGAGGTCCTCATCTGTGTaGGGCTTGAACTGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGRSSSV*GLNCAL
Trigger: CAACGCACAGTTCAAGCCGCACACAGATGAGGACCT...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTATGTGCGGCCCCTCGTaGCCAGCACGCCGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTMCGPS*PARRCA
Trigger: TGCGCAGCGGCGTGCTGGGCACGAGGGGCCGCACAT...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTTGACATGTCCCTCTCCAACTGGCACTCCTCAATaGCCAGCTGGGCACCGCGGC +
Preference number: 4 (lower is better)
Translates to: APAECDWLSLGTLTCPSPTGTPQ*PAGHRG
Trigger: GCCGCGGTGCCCAGCTGGCCATTGAGGAGTGCCAGT...TGGAGAGGGACATGTCAAGGTGCCGAGACTAAGCCAGTCACACTCGGCAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCTCCACCTGCGCCGTGTaGAAGCCGCGGCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSASTCAV*KPRPQH
Trigger: GTGCTGTGGCCGCGGCTTCCACACGGCGCAGGTGGA...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGTCCCTTTGGTCAGTaGCAGCCACAAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MRAASGTSKVPLVSGSHKGPFGQ*QPQRPR
Trigger: CCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACC...TTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 72 bp TCACAAGCCTGGGCGGGGCTCGTGATGGTTTGGCGGTaGTACAGGGTCAGGCCCAGGTTGCTGGTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SQAWAGLVMVWR*YRVRPRLLVLS
Trigger: AGACAGCACCAGCAACCTGGGCCTGACCCTGTACAACCGCCAAACCATCACGAGCCCCGCCCAGGCTTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GGATCCCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTGGGTCTGGGGAGGTTGTCAGAGCATCCTaGCCACTGGAAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSLVQDGSLYACLGGSGEVVRAS*PLEALW
Trigger: CCACAGGGCTTCCAGTGGTCAGGATGCTCTGACAAC...CTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGCTTTCTCAGGGCATTTaGGAGACATGGCTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGLSQGI*ETWLLG
Trigger: GCCTAGAAGCCATGTCTCTCAAATGCCCTGAGAAAG...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGTGTCCATGTAAGGGCTaGAATGAACCTGGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGCPCKG*NEPGAL
Trigger: AAGGGCACCAGGTTCATTTCAGCCCTTACATGGACA...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp AGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTGGCTTAGTAGACAGCTaGACAGCCAGCCAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SGTSKVPLVSGSHKGPGFGLVDS*TASQGS
Trigger: GCTCCCCTGGCTGGCTGTTCAGCTGTCTACTAAGCC...AAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp AGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTCCTTGGACGTCTTGTTaGATGTGCGGCCCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: SGTSKVPLVSGSHKGPGFPWTSC*MCGPSC
Trigger: GCACGAGGGGCCGCACATGCAACAAGACGTCCAAGG...AAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTTCAGCCAGCTCCACCTaGGCCGTGTGGAAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTSASST*AVWKPR
Trigger: CCGCGGCTTCCACACGGCGCAGGTGGAGCTGGCTGA...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGGGTCATCGGCACGTGTaGAACTCCACGAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSGHRHV*NSTSRW
Trigger: CCAGCGGCTCGTGGAGTTGCACACGTGCCGATGACC...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp ATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAATGGTGCCCTTGGGGTTaGCTGCCTGGTTTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: MRAASGTSKVPLVSGSHKWCPWG*LPGFGN
Trigger: ATTGCCGAAACCAGGCAGGCAACCCCAAGGGCACCA...TTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GGATCCCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTGGGTCTGGGGAGGGATGGCAGCCTATATaGCTGCCTAGGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GSLVQDGSLYACLGGSGEGWQPI*LPRWVW
Trigger: CCAGACCCACCTAGGCAGGCATATAGGCTGCCATCC...CTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTGGGTCAGGCCCAGGTTaGTGGTGCTGTCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPGSGPG*WCCLLG
Trigger: TCCCAAGAGACAGCACCAGCAACCTGGGCCTGACCC...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GACTCCACCAGTCAGACTTTAGTCCAGAGCAGGTACCACCCAGGCCTAGTAGGACTGAGCCGGTGTGGGTaGCCCCTTGGTTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: DSTSQTLVQSRYHPGLVGLSRCG*PLGSSP
Trigger: GGGGGAGGAACCAAGGGGGCACCCACACCGGCTCAG...TCCTACTAGGCCTGGGTGGTACCTGCTCTGGACTAAAGTCTGACTGGTGGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGCTGGTGCCCTTGACCTaGTATCTGCTTGTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGLVPLT*YLLVPF
Trigger: AAAGGGAACAAGCAGATACCAGGTCAAGGGCACCAG...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAAGCACGTCTCCTCCTCTaGGATGCTCCCCACCGACGA +
Preference number: 4 (lower is better)
Translates to: CKGCASSPWDSLELGMSKARLLL*DAPHRR
Trigger: TCGTCGGTGGGGAGCATCTCAGAGGAGGAGACGTGC...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCCCTGGGCGGGGCTCGTaGTGGTTTGGCGGTTGTACA +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSAPGRGS*WFGGCT
Trigger: TGTACAACCGCCAAACCATCACGAGCCCCGCCCAGG...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp ATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGATTGGGAGCCCATCTaGGAAGCAGATGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: MRAASGTSKVPLVSGSHKDWEPI*EADGSR
Trigger: CCTTGACCCATCTGCTTCTCAGATGGGCTCCCAATC...TTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTGCACGCCCGCGTCACTaGAAAGGCCACACCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTARPRH*KGHTCR
Trigger: TCGGCAGGTGTGGCCTTTGCAGTGACGCGGGCGTGC...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGGGCAGCCTATATGCCTaGCTAGGTGGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSGSLYA*LGGSGE
Trigger: CTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCC...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTCCAGGGACTCGGATGTaGTGGGGAGGGGTGCACCAC +
Preference number: 4 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTPGTRM*WGGVHH
Trigger: GTGGTGCACCCCTCCCCAGCACATCCGAGTCCCTGG...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GTAAAAGGGAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGTTCCTCAATGGCCAGCTaGGCACCGCGGCGCACCGAG +
Preference number: 4 (lower is better)
Translates to: VKGRSLMSGQSSASFSRCSSMAS*APRRTE
Trigger: CTCGGTGCGCCGCGGTGCCCAGCTGGCCATTGAGGA...ACACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTCCCTTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCAACTCCACGAGCCGCTaGCACTGCCGGCACTTGACG +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSANSTSR*HCRHLT
Trigger: CGTCAAGTGCCGGCAGTGCCAGCGGCTCGTGGAGTT...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGCAGGCTGGGGCAGGCTaGGTTCTAGGGTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRQAGAG*VLGWDF
Trigger: GAAGTCCCACCCTAGAACCCAGCCTGCCCCAGCCTG...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GGATCCCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTGGGTCTGGGGAGAGTACCTATGGTACCTaGGACCCCAGGGACTCGGAT +
Preference number: 4 (lower is better)
Translates to: GSLVQDGSLYACLGGSGESTYGT*DPRDSD
Trigger: ATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACT...CTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTCCCCCTGGGACAGTTTaGAGCTGGGCATGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPPPGTV*SWACPK
Trigger: CTTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGG...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAAGCAGCATCCAGAGCTaGGCTTTATCCAGCCCTAGG +
Preference number: 4 (lower is better)
Translates to: MRAASGTSKVPLVSGSHKSSIQS*ALSSPR
Trigger: CCTAGGGCTGGATAAAGCCCAGCTCTGGATGCTGCT...TTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GTTCGACTCCACCAGTCAGACTTTAGTCCAGAGCAGGTACCACCCAGGCCTAGTGCACGTCTCCTCCTCTaGGATGCTCCCCACCGACGA +
Preference number: 4 (lower is better)
Translates to: VRLHQSDFSPEQVPPRPSARLLL*DAPHRR
Trigger: TCGTCGGTGGGGAGCATCTCAGAGGAGGAGACGTGC...ACTAGGCCTGGGTGGTACCTGCTCTGGACTAAAGTCTGACTGGTGGAGTCGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR TCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTGGCGCACCGAGTCCATaGCTTCCAGGTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTGAPSP*LPGSAC
Trigger: GCAAGCGGAACCTGGAAGTCATGGACTCGGTGCGCC...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp TTGGACGTTCGACTCCACCAGTCAGACTTTAGTCCAGAGCAGGTACCACCCAGGGGCGCACCGAGTCCATaGCTTCCAGGTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: LDVRLHQSDFSPEQVPPRGAPSP*LPGSAC
Trigger: GCAAGCGGAACCTGGAAGTCATGGACTCGGTGCGCC...CCTGGGTGGTACCTGCTCTGGACTAAAGTCTGACTGGTGGAGTCGAACGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR TCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTGAGCACTGCCGTCTCTaGTGTCAGATGGGCATTAGC +
Preference number: 4 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPEHCRL*CQMGIS
Trigger: GCTAATGCCCATCTGACATCAGAGACGGCAGTGCTC...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GTGGCAGCCACAAAGGCCCAGGCTTTGGGGAGGCCCTGGTTGGTGCCCTTGGGGATTATCAACCACATTTaGATGTGGCTCCAGCACCTC +
Preference number: 4 (lower is better)
Translates to: VAATKAQALGRPWLVPLGIINHI*MWLQHL
Trigger: GAGGTGCTGGAGCCACATTCAAATGTGGTTGATAAT...CCCCAAGGGCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGTGGCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TCCTTCTCCAGGTGTGACTGGCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCATCTCCTCCTCTGAGATaGTCCCCACCGACGACAGCT +
Preference number: 4 (lower is better)
Translates to: SFSRCDWHLPSVTGLVSASPPLR*SPPTTA
Trigger: AGCTGTCGTCGGTGGGGAGCATCTCAGAGGAGGAGA...TGCCGAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR GCA 90 bp TCTCTTGGGGTAGGTGGTGGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCACCAGCTCCCCACTGCTaGACGCCCGCGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: SLGVGGGRLFKLSAFPGPPAPHC*TPASLQ
Trigger: TTGCAGTGACGCGGGCGTGCAGCAGTGGGGAGCTGG...TGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCCACCACCTACCCCAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCACCGCTGCGCATGTCCTaGTCACAGAAGTCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPPLRMS*SQKSGL
Trigger: TAGCCCCGACTTCTGTGAGCAGGACATGCGCAGCGG...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAACGTCTTGTTGCATGTaGGGCCCCTCGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPTSCCM*GPSCPA
Trigger: TGCTGGGCACGAGGGGCCGCACATGCAACAAGACGT...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCGGGCCACTAGGTGGTTaGCGGCGCAGGGCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSGPLGG*RRRARQ
Trigger: CTGCCTAGCCCTGCGCCGGCAACCACCTAGTGGCCC...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTACTCAGGGGCATGACTaGAAAGGCACAGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPTQGHD*KGTALS
Trigger: GGAAAGGGCTGTGCCTTTGCAGTCATGCCCCTGAGT...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGCTCCTGCTGCTTCCCTaGCCCTTTTCGTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRLLLLP*PFSSSQ
Trigger: CTGGCTGGACGAAAAGGGGCAGGGAAGCAGCAGGAG...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TTCTCCAGGTGTGACTGGCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTCTCCATGCCAGGCTTTaGCACCTTGCGTCACCACCT +
Preference number: 4 (lower is better)
Translates to: FSRCDWHLPSVTGLVSAPLHARL*HLASPP
Trigger: AGGTGGTGACGCAAGGTGGCAAAGCCTGGCATGGAG...AGGTGCCGAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCCCACCGACGACAGCTTaGCCAGGTACAGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSAPPTTA*PGTASC
Trigger: GCAACTGGCTGTACCTGGCCAAGCTGTCGTCGGTGG...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCTCCTCAATGGCCAGCTaGGCACCGCGGCGCACCGAG +
Preference number: 4 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSSSMAS*APRRTE
Trigger: CTCGGTGCGCCGCGGTGCCCAGCTGGCCATTGAGGA...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCGCAAGGAGTCGAGTGTaGAGCAGTTCCAGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSAARSRV*SSSSAG
Trigger: ACCGGCGCTGGAACTGCTCCACACTCGACTCCTTGC...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGAACTGTGCGTTGCGTaGCACCAGTGCCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRELCVA*HQCPGG
Trigger: TCCTCCAGGGCACTGGTGCCACGCAACGCACAGTTC...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTGGCTGGGTTCTAGGGTaGGACTTCAGTCGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPGWVLG*DFSRLL
Trigger: CAAGAGACGACTGAAGTCCCACCCTAGAACCCAGCC...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGGGGCTCGTGATGGTTTaGCGGTTGTACAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSGLVMV*RLYRVR
Trigger: CCTGACCCTGTACAACCGCCAAACCATCACGAGCCC...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAATTGAGCAGAGATCTTaGCTGGGGGCCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: MRAASGTSKVPLVSGSHKIEQRS*LGAKGV
Trigger: AACACCCTTGGCCCCCAGCCAAGATCTCTGCTCAAT...TTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGGGACCTACTGTTCCCTaGATGGGGAGAGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSGPTVP*MGRVAQ
Trigger: CTGAGCCACTCTCCCCATCCAGGGAACAGTAGGTCC...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp CGTAAAAGGGAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGGATGCTGAGCCGGTGTaGGTGCCCCCTTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RKREEFDEWAELSLLLQVDAEPV*VPPWFL
Trigger: GAGGAACCAAGGGGGCACCCACACCGGCTCAGCATC...CACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTCCCTTTTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR TCA 90 bp TTCTCCAGGTGTGACTGGCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTTCTGGATCAGGCCCTTaGGTTTCTCGCACGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSRCDWHLPSVTGLVSAPSGSGP*VSRTSP
Trigger: AGGAGACGTGCGAGAAACTCAAGGGCCTGATCCAGA...AGGTGCCGAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR TCA 90 bp AGTCTCGGCACCTTGACATGTCCCTCTCCAAAGGGGATTGGACGTTCGACTCCACTCCTTCTCCAGGTGTaGCTGGCACCTGCCGAGTGT +
Preference number: 4 (lower is better)
Translates to: SLGTLTCPSPKGIGRSTPLLLQV*LAPAEC
Trigger: ACACTCGGCAGGTGCCAGTCACACCTGGAGAAGGAG...TGGAGTCGAACGTCCAATCCCCTTTGGAGAGGGACATGTCAAGGTGCCGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR GCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTCCAGGTACAGCCAGTTaGTCGCGGCGGCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTPGTAS*SRRLRR
Trigger: TCTTCTCAGCCGCCGCGAGCAACTGGCTGTACCTGG...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCTCTCCTCCTCTGAGATaGTCCCCACCGACGACAGCT +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSASPPLR*SPPTTA
Trigger: AGCTGTCGTCGGTGGGGAGCATCTCAGAGGAGGAGA...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAACTTGCGTCACCACCTTaGCGAAGACGGGCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: CKGCASSPWDSLELGMSKLASPP*RRRARS
Trigger: ACTCCTTGCCCGTCTTCGGCAAGGTGGTGACGCAAG...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTTGTGGGCTGACCCCATaGACTGTCCTGTCACAGCCG +
Preference number: 4 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTCGLTP*TVLSQP
Trigger: CGGCTGTGACAGGACAGTGCATGGGGTCAGCCCACA...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTGGTACCTATTTTCCCTaGCATAAGGCCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPGTYFP*HKAPSS
Trigger: GGAAGAGGGGGCCTTATGGCAGGGAAAATAGGTACC...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAACCTGTCCATCCAGCTTaGTGTGAGAGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CKGCASSPWDSLELGMSKPVHPA*CERSGE
Trigger: CTCCCCAGACCTCTCACAGCAAGCTGGATGGACAGG...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GGATCCCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTGGGTCTGGGGAGCTGGAGAAGAGTTTCTaGAGGCTGGAGCCCATATTC +
Preference number: 4 (lower is better)
Translates to: GSLVQDGSLYACLGGSGELEKSF*RLEPIF
Trigger: GAATATGGGCTCCAGCCTGCAGAAACTCTTCTCCAG...CTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp CCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTTGACATGTCCCTCTCCAAAGCAGGCTTTGCCACCTTaGGTCACCACCTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: PAECDWLSLGTLTCPSPKQALPP*VTTLPK
Trigger: CTTCGGCAAGGTGGTGACGCAAGGTGGCAAAGCCTG...CTTTGGAGAGGGACATGTCAAGGTGCCGAGACTAAGCCAGTCACACTCGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR GCA 90 bp TTGGACGTTCGACTCCACCAGTCAGACTTTAGTCCAGAGCAGGTACCACCCAGGGCTTCAGGCCAGCATTaGCCCAGGCTACCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LDVRLHQSDFSPEQVPPRASGQH*PRLPPS
Trigger: GGAAGGAGGTAGCCTGGGGCAATGCTGGCCTGAAGC...CCTGGGTGGTACCTGCTCTGGACTAAAGTCTGACTGGTGGAGTCGAACGTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp CCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTTGACATGTCCCTCTCCAAAGCGCCGGTTCCGGAACTaGTACTGGCACTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: PAECDWLSLGTLTCPSPKRRFRN*YWHSSM
Trigger: CATTGAGGAGTGCCAGTACCAGTTCCGGAACCGGCG...CTTTGGAGAGGGACATGTCAAGGTGCCGAGACTAAGCCAGTCACACTCGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp CGTAAAAGGGAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGGCAAGGAGTCGAGTGTaGAGCAGTTCCAGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: RKREEFDEWAELSLLLQVARSRV*SSSSAG
Trigger: ACCGGCGCTGGAACTGCTCCACACTCGACTCCTTGC...CACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTCCCTTTTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAAGCTCACAGCCGTCGATaGCCTTGGACGTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: CKGCASSPWDSLELGMSKAHSRR*PWTSCC
Trigger: GCAACAAGACGTCCAAGGCCATCGACGGCTGTGAGC...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTCTTGGGGTAGGTGGTGGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCACAAAGGCCCAGGCTTTaGGGAGGCCCTGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLGVGGGRLFKLSAFPGPQRPRL*GGPGWC
Trigger: GCACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTG...TGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCCACCACCTACCCCAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp AGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTATATGCCTGCCTAGGTaGGTCTGGGGAGTGGTTAAG +
Preference number: 4 (lower is better)
Translates to: SGTSKVPLVSGSHKGPGFICLPR*VWGVVK
Trigger: CTTAACCACTCCCCAGACCCACCTAGGCAGGCATAT...AAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGGGTTTGGGCAGGATGTaGACCCTCTGGCCAATTTCC +
Preference number: 4 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSGLGRM*TLWPIS
Trigger: GGAAATTGGCCAGAGGGTCCACATCCTGCCCAAACC...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCCTTCTCCAGGTGTGACTGGCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCATTCTCCAGGTGTGACTaGCACCTGCCGAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: SFSRCDWHLPSVTGLVSAFSRCD*HLPSVT
Trigger: AGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAA...TGCCGAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR CAA 72 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTaGCAGTACCTATGGTACCTGGGACCCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: QAQVAGAVSWEI*QYLWYLGPQGL
Trigger: GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GAGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTTGAATTCGTTGCTCGCGGCGGCTaGGAAGACGGCGAAGACGAG +
Preference number: 4 (lower is better)
Translates to: EKSFCRLEPIFRISDVEFVARGG*EDGEDE
Trigger: CTCGTCTTCGCCGTCTTCTCAGCCGCCGCGAGCAAC...GAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCTCTGGATCAGGCCCTTaGGTTTCTCGCACGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSASGSGP*VSRTSP
Trigger: AGGAGACGTGCGAGAAACTCAAGGGCCTGATCCAGA...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTCCGAATCTCGGACGTTaGATTCAGCCACTGAACACA +
Preference number: 4 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPPNLGR*IQPLNT
Trigger: TGTGTTCAGTGGCTGAATTCAACGTCCGAGATTCGG...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGAACTCCCTGGCAGGTaGAAAGGGCAGTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRELPGR*KGQFPS
Trigger: TGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTC...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp CTTAGTCTCGGCACCTTGACATGTCCCTCTCCAAAGGGGATTGGACGTTCGACTCCTTCCTTGCGCCTTTaGGTCCTCTCCCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: LSLGTLTCPSPKGIGRSTPSLRL*VLSPDL
Trigger: CAGGTCAGGGGAGAGGACTCAAAGGCGCAAGGAAGG...AGTCGAACGTCCAATCCCCTTTGGAGAGGGACATGTCAAGGTGCCGAGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR GCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCTTCCGCTTGCACATCTaGACCTGCCTCTGGATCAGG +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSAFRLHI*TCLWIR
Trigger: CCTGATCCAGAGGCAGGTGCAGATGTGCAAGCGGAA...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp AAAGGGAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGTGACCTTGCGTCACCACCTTaGCGAAGACGGGCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: KGRSLMSGQSSASFSRCDLASPP*RRRARS
Trigger: ACTCCTTGCCCGTCTTCGGCAAGGTGGTGACGCAAG...GTCACACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR GCA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCTGCCCAGCACGCCGCTaGGCATGTCCTGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSCPARR*ACPAHR
Trigger: TCTGTGAGCAGGACATGCGCAGCGGCGTGCTGGGCA...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGGCCCTTGGGGTTGCCTaGCTGGTTTCGGCAATAAAT +
Preference number: 4 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSALGVA*LVSAIN
Trigger: ATTTATTGCCGAAACCAGGCAGGCAACCCCAAGGGC...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp AGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTCTTCTAGGCTCAAGCTaGCAGGAGTCCATGTGTATG +
Preference number: 4 (lower is better)
Translates to: SGTSKVPLVSGSHKGPGFLLGSS*QESMCM
Trigger: CATACACATGGACTCCTGGCAGCTTGAGCCTAGAAG...AAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCGGACTCTTCTGGCCCTaGCTGTCCATCCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPGLFWP*LSIQLA
Trigger: AGCAAGCTGGATGGACAGGCAGGGCCAGAAGAGTCC...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACTGTGCTGGGGAGGGGTaGACCACACTGCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: QAQVAGAVSWEILQYLWYCAGEG*TTLLRP
Trigger: AGGTCTCAGCAGTGTGGTGCACCCCTCCCCAGCACA...GTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTACATCAGAGCTGGCCTaGCCCAAGATTATCAACCAC +
Preference number: 4 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPTSELA*PKIINH
Trigger: GTGGTTGATAATCTTGGGGCAGGCCAGCTCTGATGT...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTGATTTCTTTGATCTCTaGAGCACTGGCGGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPDFFDL*STGGGW
Trigger: CCAACCACCGCCAGTGCTGCAGAGATCAAAGAAATC...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCATCAGGGCATCACCTTTaGCTTGGGACGAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPSGHHL*LGTRGE
Trigger: CTCTCCTCTCGTCCCAAGGCAAAGGTGATGCCCTGA...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp AAAGGGAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGTGACCCACTGTCTCCTCCATaGCAGGCTTTGCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: KGRSLMSGQSSASFSRCDPLSPP*QALPPC
Trigger: GCAAGGTGGCAAAGCCTGGCATGGAGGAGACAGTGG...GTCACACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp TCTCTTGGGGTAGGTGGTGGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCAGAGCATCCTGACCACTaGAAGCCCTGTGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SLGVGGGRLFKLSAFPGPEHPDH*KPCGLT
Trigger: GGTCAGCCCACAGGGCTTCCAGTGGTCAGGATGCTC...TGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCCACCACCTACCCCAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp CCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGCAACTGAGTGGTCAGTaGCAGCCACATGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGCWCCLLGNLAVPMVPGQLSGQ*QPHAGS
Trigger: GCTGCCCGCATGTGGCTGCCACTGACCACTCAGTTG...CCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGATCACAGCCGGGATCCCTaGTCCAGGATGGCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: SLGKSCSTYGTWDPRDSDHSRDP*SRMAAY
Trigger: ATAGGCTGCCATCCTGGACCAGGGATCCCGGCTGTG...ATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAACAAACCACAATGCCTaGAGAAGAGTTTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: MRAASGTSKVPLVSGSHKTNHNA*RRVSAG
Trigger: GCCTGCAGAAACTCTTCTCCAGGCATTGTGGTTTGT...TTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGGGTTGGCCTGGGCAGTaGTTCCTAGAATTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSGWPGQ*FLEFGL
Trigger: GAGACCAAATTCTAGGAACCACTGCCCAGGCCAACC...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCAGGATGTGGACCCTCTaGCCAATTTCCAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: AVSWEILQYLWYLGPQGLRMWTL*PISRPR
Trigger: CCGTGGCCTGGAAATTGGCCAGAGGGTCCACATCCT...GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCGAGAGGAGAGTGGTTTaGGCAGGATGTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSAERRVV*AGCGPS
Trigger: AGAGGGTCCACATCCTGCCCAAACCACTCTCCTCTC...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACGGTGGGGCAGCAGAGTaGGTTAGCAGCATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QAQVAGAVSWEILQYLWYGGAAE*VSSIQS
Trigger: GCTCTGGATGCTGCTAACCCACTCTGCTGCCCCACC...GTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TTGGACGTTCGACTCCACCAGTCAGACTTTAGTCCAGAGCAGGTACCACCCAGGCCTGAGTACCCACGATaGCTTCAGGCCAGCATTGCC +
Preference number: 4 (lower is better)
Translates to: LDVRLHQSDFSPEQVPPRPEYPR*LQASIA
Trigger: GGCAATGCTGGCCTGAAGCCATCGTGGGTACTCAGG...CCTGGGTGGTACCTGCTCTGGACTAAAGTCTGACTGGTGGAGTCGAACGTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp TCCTTCTCCAGGTGTGACTGGCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCAGAGGAGTTTGATGAGTaGGCAGAGCTCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SFSRCDWHLPSVTGLVSAEEFDE*AELSLL
Trigger: AAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTC...TGCCGAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR TCA 90 bp CCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGGTTGTGGCCATCAAGTaGGATGGCCTGTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGCWCCLLGNLAVPMVPGVVAIK*DGLYRA
Trigger: GGCCCTGTACAGGCCATCTCACTTGATGGCCACAAC...CCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACGGGGGCCAAGGGTGTTaGCCCTCTTTTCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: QAQVAGAVSWEILQYLWYGGQGC*PSFHEG
Trigger: TCCCTCATGAAAAGAGGGTCAACACCCTTGGCCCCC...GTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGCTGTGGATTTCTTTaGTCTCTGCAGCACTGGCGG +
Preference number: 4 (lower is better)
Translates to: AVSWEILQYLWYLGPQGLGCGFL*SLQHWR
Trigger: CCGCCAGTGCTGCAGAGATCAAAGAAATCCACAGCC...GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GACTGGCTTAGTCTCGGCACCTTGACATGTCCCTCTCCAAAGGGGATTGGACGTCTTCTCATGGGGTCCTaGGTACCCACGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: DWLSLGTLTCPSPKGIGRLLMGS*VPTMAS
Trigger: TGAAGCCATCGTGGGTACTCAGGACCCCATGAGAAG...ACGTCCAATCCCCTTTGGAGAGGGACATGTCAAGGTGCCGAGACTAAGCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR GCA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCTTGCACATCTGCACCTaGCTCTGGATCAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPLHICT*LWIRPL
Trigger: CAAGGGCCTGATCCAGAGGCAGGTGCAGATGTGCAA...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GACTCCACCAGTCAGACTTTAGTCCAGAGCAGGTACCACCCAGGCCTAGTAGGATTCCGCTTGCACATCTaGACCTGCCTCTGGATCAGG +
Preference number: 4 (lower is better)
Translates to: DSTSQTLVQSRYHPGLVGFRLHI*TCLWIR
Trigger: CCTGATCCAGAGGCAGGTGCAGATGTGCAAGCGGAA...TCCTACTAGGCCTGGGTGGTACCTGCTCTGGACTAAAGTCTGACTGGTGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR GCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTCTTCCAGGTTCCGCTTaGACATCTGCACCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTLPGSA*TSAPAS
Trigger: AGAGGCAGGTGCAGATGTGCAAGCGGAACCTGGAAG...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp AAAGGGAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGTGACCTTCCAGGTTCCGCTTaGACATCTGCACCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KGRSLMSGQSSASFSRCDLPGSA*TSAPAS
Trigger: AGAGGCAGGTGCAGATGTGCAAGCGGAACCTGGAAG...GTCACACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR GCA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCTGGACGAGGCCCCCTTaGTTCTCTCCCGCACATCCA +
Preference number: 4 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSWTRPP*FSPAHP
Trigger: TGGATGTGCGGGAGAGAAGCAAGGGGGCCTCGTCCA...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCGTGCGGCTTGAACTGTaGGTTGCGTGGCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSVRLEL*VAWHQC
Trigger: GCACTGGTGCCACGCAACGCACAGTTCAAGCCGCAC...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAAAGCACCAGTGGAATTTaGAGCTGCAGCGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: CKGCASSPWDSLELGMSKSTSGI*SCSVQP
Trigger: TGGCTGAACGCTGCAGCTGCAAATTCCACTGGTGCT...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGGAGAGGACTTTATTaGACAGCCCTTTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRGRGLY*TALSSL
Trigger: GAGGGAGGAAAGGGCTGTGCAATAAAGTCCTCTCCC...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GTAAAAGGGAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGTGGCTACCTCCTTCCTTaGGCCTTTGAGTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VKGRSLMSGQSSASFSRCGYLLP*AFESSP
Trigger: GGGAGAGGACTCAAAGGCGCAAGGAAGGAGGTAGCC...ACACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTCCCTTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGATCTGCACCTGCCTCTaGATCAGGCCCTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRICTCL*IRPLSF
Trigger: GAAACTCAAGGGCCTGATCCAGAGGCAGGTGCAGAT...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGATCGCCGGTTCCGGAACTaGTACTGGCACTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: SLGKSCSTYGTWDPRDSDRRFRN*YWHSSM
Trigger: CATTGAGGAGTGCCAGTACCAGTTCCGGAACCGGCG...ATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCAGCCGTCGATGGCCTTaGACGTCTTGTTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: AVSWEILQYLWYLGPQGLSRRWP*TSCCMC
Trigger: GCACATGCAACAAGACGTCCAAGGCCATCGACGGCT...GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGCTCCCTCTTCTTGCCTaGAAGGACCCACAGATATCG +
Preference number: 4 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRLPLLA*KDPQIS
Trigger: CGATATCTGTGGGTCCTTCCAGGCAAGAAGAGGGAG...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCAGTGTGGGGGCAGTCTaGAAAGTGGGCTTACAGCAA +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSASVGAV*KVGLQQ
Trigger: TTGCTGTAAGCCCACTTTCCAGACTGCCCCCACACT...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACAGCAGAGATCTTGGCTaGGGGCCAAGGGTGTTGACC +
Preference number: 4 (lower is better)
Translates to: QAQVAGAVSWEILQYLWYSRDLG*GPRVLT
Trigger: GGTCAACACCCTTGGCCCCCAGCCAAGATCTCTGCT...GTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAAGGGACAGTTTGGAGCTaGGCATGTCCAAAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CKGCASSPWDSLELGMSKGTVWS*ACPKKL
Trigger: GAGCTTCTTTGGACATGCCCAGCTCCAAACTGTCCC...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp CCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGGGGACGAGAGGAGAGTaGTTTGGGCAGGATGTGGAC +
Preference number: 4 (lower is better)
Translates to: PGCWCCLLGNLAVPMVPGGTRGE*FGQDVD
Trigger: GTCCACATCCTGCCCAAACCACTCTCCTCTCGTCCC...CCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGCATCACCTTTGCCTTaGGACGAGAGGAGAGTGGTT +
Preference number: 4 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRASPLP*DERRVV
Trigger: AACCACTCTCCTCTCGTCCCAAGGCAAAGGTGATGC...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 72 bp TTCTCTACCTTTGGGTACAAGAACCAAGGAGGAGGCTaGGCTGGAGGACTCTTCTGGCCCTGCCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: FSTFGYKNQGGG*AGGLFWPCLSI
Trigger: GATGGACAGGCAGGGCCAGAAGAGTCCTCCAGCCAAGCCTCCTCCTTGGTTCTTGTACCCAAAGGTAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 72 bp TGTACAGGGTCAGGCCCAGGTTGCTGGTGCTGTCTCTaGGGAAATCTTGCAGTACCTATGGTACCTGGGACC +
Preference number: 4 (lower is better)
Translates to: CTGSGPGCWCCL*GNLAVPMVPGT
Trigger: GGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTGACCCTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp TTCTCCAGGTGTGACTGGCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTCTTTCTGTCAGTAGATaGCATCCACTGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FSRCDWHLPSVTGLVSAPLSVSR*HPLSPP
Trigger: TGGAGGAGACAGTGGATGTCATCTACTGACAGAAAG...AGGTGCCGAGACTAAGCCAGTCACACTCGGCAGGTGCCAGTCACACCTGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR TCA 90 bp TTGGACGTTCGACTCCACCAGTCAGACTTTAGTCCAGAGCAGGTACCACCCAGGTTAGTCTCGGCACCTTaGCATGTCCCTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LDVRLHQSDFSPEQVPPRLVSAP*HVPLQR
Trigger: CCTTTGGAGAGGGACATGTCAAGGTGCCGAGACTAA...CCTGGGTGGTACCTGCTCTGGACTAAAGTCTGACTGGTGGAGTCGAACGTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR GCA 90 bp TCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGATTGCAAAGGCCACACCTaGCGAAGAGATGGCGTACAC +
Preference number: 4 (lower is better)
Translates to: SLGKSCSTYGTWDPRDSDCKGHT*RRDGVH
Trigger: GTGTACGCCATCTCTTCGGCAGGTGTGGCCTTTGCA...ATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTAGTGGAATTTGCAGCTaGAGCGTTCAGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTSGICS*SVQPAP
Trigger: TGGAGCTGGCTGAACGCTGCAGCTGCAAATTCCACT...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCGGCCCAGGTTGCTGGTaGTGTCTCTTGGGAAATCTT +
Preference number: 4 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPGPGCW*CLLGNL
Trigger: AAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCC...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATTATCGGCCTTCCCTaGGCCACTAGGTGGTTGCCG +
Preference number: 4 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSIIGLP*ATRWLP
Trigger: CGGCAACCACCTAGTGGCCCAGGGAAGGCCGATAAT...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGCAGATAACAACTGAGTaGTCAGTGGCAGCCACATGC +
Preference number: 4 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRQITTE*SVAATC
Trigger: GCATGTGGCTGCCACTGACCACTCAGTTGTTATCTG...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCGGCCATCAAGTGAGATaGCCTGTACAGGGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPGHQVR*PVQGLE
Trigger: TTCTAGGCCCTGTACAGGCCATCTCACTTGATGGCC...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp AGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTGGCTTCCTCCTTGTATaGACATTGAGCAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: SGTSKVPLVSGSHKGPGFGFLLV*TLSRDL
Trigger: AAGATCTCTGCTCAATGTCCATACAAGGAGGAAGCC...AAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCCTCCAGCACCTCACTTaGTTTTGGCTTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSALQHLT*FWLPPC
Trigger: ACAAGGAGGAAGCCAAAACCAAGTGAGGTGCTGGAG...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp CTCCACCAGTCAGACTTTAGTCCAGAGCAGGTACCACCCAGGCCTAGTAGGAATAAGGAGGGCTTCTCATaGGGTCCTGAGTACCCACGA +
Preference number: 4 (lower is better)
Translates to: LHQSDFSPEQVPPRPSRNKEGFS*GPEYPR
Trigger: TCGTGGGTACTCAGGACCCCATGAGAAGCCCTCCTT...ATTCCTACTAGGCCTGGGTGGTACCTGCTCTGGACTAAAGTCTGACTGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp AGTCTCGGCACCTTGACATGTCCCTCTCCAAAGGGGATTGGACGTTCGACTCCACTCTCCAAAGGGGATTaGACGTTCGACTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: SLGTLTCPSPKGIGRSTPLSKGD*TFDSTS
Trigger: ACTGGTGGAGTCGAACGTCCAATCCCCTTTGGAGAG...TGGAGTCGAACGTCCAATCCCCTTTGGAGAGGGACATGTCAAGGTGCCGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415567.1
3UTR CAA 72 bp TCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTaGAATTCAGCCACTGAACACAGGAGCCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SAGWSPYSESRT*NSATEHRSQEL
Trigger: AAGCTCCTGGCTCCTGTGTTCAGTGGCTGAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 72 bp CTATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTaGGAGCTGGGCATGTCCAAAGAAGCTCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LCKGCASSPWDS*ELGMSKEAPFP
Trigger: AGGAAAAGGAGCTTCTTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GAGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTTGAATTCCATCTGTGTGCGGCTTaGACTGTGCGTTGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: EKSFCRLEPIFRISDVEFHLCAA*TVRCVA
Trigger: TGCCACGCAACGCACAGTTCAAGCCGCACACAGATG...GAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp TCTCTTGGGGTAGGTGGTGGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCAGACACAGATAACAACTaGGTGGTCAGTGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLGVGGGRLFKLSAFPGPDTDNN*VVSGSH
Trigger: GTGGCTGCCACTGACCACTCAGTTGTTATCTGTGTC...TGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCCACCACCTACCCCAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GAGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTTGAATTCGGTGCACCACACTGCTaGGACCTCACTGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: EKSFCRLEPIFRISDVEFGAPHC*DLTVSL
Trigger: AAGGCTGACAGTGAGGTCTCAGCAGTGTGGTGCACC...GAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCTCAAGGGCAAGGTCTTaGTCCATGCATGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: AVSWEILQYLWYLGPQGLSRARS*SMHVLL
Trigger: GAGAAGGACATGCATGGATCAAGACCTTGCCCTTGA...GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAGACCCAAGAAGACCTaGAGTTTCTCTACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPRPKKT*SFSTFG
Trigger: CCCAAAGGTAGAGAAACTGCAGGTCTTCTTGGGTCT...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAACAAGGTCTTGATCCATaGATGTCCTTCTCACAAGCC +
Preference number: 4 (lower is better)
Translates to: CKGCASSPWDSLELGMSKQGLDP*MSFSQA
Trigger: GGCTTGTGAGAAGGACATGCATGGATCAAGACCTTG...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GTTCGACTCCACCAGTCAGACTTTAGTCCAGAGCAGGTACCACCCAGGCCTAGTTCCTCTCCCCTGACCTaGTTTCTGTCAGTAGATGAC +
Preference number: 4 (lower is better)
Translates to: VRLHQSDFSPEQVPPRPSSSPLT*FLSVDD
Trigger: GTCATCTACTGACAGAAAGCAGGTCAGGGGAGAGGA...ACTAGGCCTGGGTGGTACCTGCTCTGGACTAAAGTCTGACTGGTGGAGTCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp CTTAGTCTCGGCACCTTGACATGTCCCTCTCCAAAGGGGATTGGACGTTCGACTATCTGCACCTGCCTCTaGATCAGGCCCTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LSLGTLTCPSPKGIGRSTICTCL*IRPLSF
Trigger: GAAACTCAAGGGCCTGATCCAGAGGCAGGTGCAGAT...AGTCGAACGTCCAATCCCCTTTGGAGAGGGACATGTCAAGGTGCCGAGACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CCA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCACAACCAGTATCTCTTaGGGTAGGTGGTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPTTSIS*GRWWET
Trigger: AGTCTCCCACCACCTACCCCAAGAGATACTGGTTGT...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGATCTGCCTAGGTGGGTCTaGGGAGTGGTTAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SLGKSCSTYGTWDPRDSDLPRWV*GVVKFP
Trigger: AGGAAACTTAACCACTCCCCAGACCCACCTAGGCAG...ATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTCTTGGGGTAGGTGGTGGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCAATCTTGCAGTACCTATaGTACCTGGGACCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLGVGGGRLFKLSAFPGPILQYL*YLGPQG
Trigger: TCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGAT...TGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCCACCACCTACCCCAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCGCTGGTGCTGTCTCTTaGGAAATCTTGCAGTACCTA +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSAAGAVS*EILQYL
Trigger: TAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGC...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTCTTGGGGTAGGTGGTGGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCATCAGGCCCAGGTTGCTaGTGCTGTCTCTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SLGVGGGRLFKLSAFPGPSGPGC*CCLLGN
Trigger: ATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTGA...TGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCCACCACCTACCCCAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GAGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTTGAATTCCTTAGAGCCCCAGTGTaGGGGCAGTCTGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: EKSFCRLEPIFRISDVEFLRAPV*GQSGKW
Trigger: CCACTTTCCAGACTGCCCCCACACTGGGGCTCTAAG...GAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTTCTGGGAACCCCAAGTaGGGGATCACAGAGCATAAA +
Preference number: 4 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTSGNPK*GITEHK
Trigger: TTTATGCTCTGTGATCCCCCACTTGGGGTTCCCAGA...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GAGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTTGAATTCCAGGAGCTTGGAGTCTaGGAACCCCAAGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: EKSFCRLEPIFRISDVEFQELGV*EPQVGD
Trigger: ATCCCCCACTTGGGGTTCCCAGACTCCAAGCTCCTG...GAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCGCTTTAGGAACTCCCTaGCAGGTGAAAAGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPALGTP*QVKRAV
Trigger: AACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGC...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCTGGCGGTGGTTGGCCTaGGCAGTGGTTCCTAGAATT +
Preference number: 4 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSWRWLA*AVVPRI
Trigger: AATTCTAGGAACCACTGCCCAGGCCAACCACCGCCA...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp GCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCATAAAAATTGGAGGATaGGGTGGGGCAGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: AVSWEILQYLWYLGPQGLIKIGG*GGAAEW
Trigger: CCACTCTGCTGCCCCACCCCATCCTCCAATTTTTAT...GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 72 bp GCTGTCCATGTAAGGGCTGAAATGAACCTGGTGCCCTaGACCTGGTATCTGCTTGTTCCCTTTCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AVHVRAEMNLVP*TWYLLVPFLRA
Trigger: TGCCCTGAGAAAGGGAACAAGCAGATACCAGGTCAAGGGCACCAGGTTCATTTCAGCCCTTACATGGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 72 bp GGACTTCAGTCGTCTCTTGCTCTCATCTCCCTCTTCTaGCCTGGAAGGACCCACAGATATCGAACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: GLQSSLALISLF*PGRTHRYRTSS
Trigger: GCTAGAGGTTCGATATCTGTGGGTCCTTCCAGGCAAGAAGAGGGAGATGAGAGCAAGAGACGACTGAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCAGCAACTTCCTCTGGTaGTTGGGAGCCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSSNFLW*LGAHLR
Trigger: TCTCAGATGGGCTCCCAATCACCAGAGGAAGTTGCT...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCTCTCTTGGGAAATCTTaGAGTACCTATGGTACCTGG +
Preference number: 4 (lower is better)
Translates to: SFLRACSALRNHVGSSSASLGKS*STYGTW
Trigger: CCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGA...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCCACCTCACTTGGTTTTaGCTTCCTCCTTGTATGGAC +
Preference number: 4 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPHLTWF*LPPCMD
Trigger: GTCCATACAAGGAGGAAGCCAAAACCAAGTGAGGTG...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCAGCTGTGGCGACAGTTaGATCAGCTTTCATCCACAT +
Preference number: 4 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPSCGDS*ISFHPH
Trigger: ATGTGGATGAAAGCTGATCCAACTGTCGCCACAGCT...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp GCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCATAAAATCTCCGACCTaGAACTTAGAGCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: AVSWEILQYLWYLGPQGLIKSPT*NLEPQC
Trigger: ACACTGGGGCTCTAAGTTTCAGGTCGGAGATTTTAT...GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp CCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGCATTCTTGGTTTGTCTaGTTCCCAGGACTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PGCWCCLLGNLAVPMVPGHSWFV*FPGLLW
Trigger: CCACAACAGTCCTGGGAAGCAGACAAACCAAGAATG...CCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp TCTCTTGGGGTAGGTGGTGGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCAAGGCACAAACCACAATaGCTGGAGAAGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLGVGGGRLFKLSAFPGPRHKPQ*LEKSFC
Trigger: GCAGAAACTCTTCTCCAGGCATTGTGGTTTGTGCCT...TGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCCACCACCTACCCCAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp TCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCGGATAGAGTTTCTGCAGGCTaGAGCCCATATTCCGAATCT +
Preference number: 4 (lower is better)
Translates to: SLGKSCSTYGTWDPRDSDRVSAG*SPYSES
Trigger: AGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCT...ATCCGAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCCATCAGACTATGTCATaGGACGTCACAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPHQTMS*DVTMAK
Trigger: CTTTGCCATTGTGACGTCCCATGACATAGTCTGATG...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR TCA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCTTTTTCCAGAGGGTGTaGCTTCCATCAAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSFFQRV*LPSSRY
Trigger: GTACCGACTTGATGGAAGTCACACCCTCTGGAAAAA...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
3UTR CAA 72 bp ATCAGAGCTGGCCTGCCCCAAGATTATCAACCACATTaGAATGTGGCTCCAGCACCTCACTTGGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: IRAGLPQDYQPH*NVAPAPHLVLA
Trigger: AGCCAAAACCAAGTGAGGTGCTGGAGCCACATTCAAATGTGGTTGATAATCTTGGGGCAGGCCAGCTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CCA 90 bp CAGGCCCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTTTTCCTGTGGCTGTaGATTTCTTTGATCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QAQVAGAVSWEILQYLWYLFLWL*ISLISA
Trigger: TGCAGAGATCAAAGAAATCCACAGCCACAGGAAAAG...GTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCGTCCATGTGTATGTGTaGTGGAGAGTTAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSVHVYV*WRVKSS
Trigger: AGAACTCTTAACTCTCCAGCACACATACACATGGAC...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR GCA 90 bp GCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCATAATTGTTTTATCGTaGATCAGACTATGTCATGGG +
Preference number: 4 (lower is better)
Translates to: AVSWEILQYLWYLGPQGLIIVLS*IRLCHG
Trigger: CCCATGACATAGTCTGATGCACGATAAAACAATTAT...GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS GCA 90 bp GTCCTCATCTGTGTGCGGCTTGAACTGTGCGTTGCGTGGCACCAGTaGCCTGGAGGAGCCCACGCGGCGTGGCTCCACCTCAGTGGCACC +
Preference number: 5 (lower is better)
Translates to: VLICVRLELCVAWHQ*PGGAHAAWLHLSGT
Trigger: GGTGCCACTGAGGTGGAGCCACGCCGCGTGGGCTCCTCCAGGGCACTGGTGCCACGCAACGCACAGTTCAAGCCGCACACAGATGAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CCA 90 bp GTACACCAGGTCCTCATCTGTGTGCGGCTTGAACTGTGCGTTGCGTaGCACCAGTGCCCTGGAGGAGCCCACGCGGCGTGGCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: VHQVLICVRLELCVA*HQCPGGAHAAWLHL
Trigger: GAGGTGGAGCCACGCCGCGTGGGCTCCTCCAGGGCACTGGTGCCACGCAACGCACAGTTCAAGCCGCACACAGATGAGGACCTGGTGTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CCA 90 bp ACCTCCCTACAGCCTTCCGGGAGCTGGACGGGGCCTCCCCAGCTTTaGGCAGCTTGGGACAGTGGCCCGAGACTGTGGGAATCCGAAACC +
Preference number: 5 (lower is better)
Translates to: TSLQPSGSWTGPPQL*AAWDSGPRLWESET
Trigger: GGTTTCGGATTCCCACAGTCTCGGGCCACTGTCCCAAGCTGCCCAAAGCTGGGGAGGCCCCGTCCAGCTCCCGGAAGGCTGTAGGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS GCA 90 bp AGGCTCCAAGTACACCAGGTCCTCATCTGTGTGCGGCTTGAACTGTaGGTTGCGTGGCACCAGTGCCCTGGAGGAGCCCACGCGGCGTGG +
Preference number: 5 (lower is better)
Translates to: RLQVHQVLICVRLEL*VAWHQCPGGAHAAW
Trigger: CCACGCCGCGTGGGCTCCTCCAGGGCACTGGTGCCACGCAACGCACAGTTCAAGCCGCACACAGATGAGGACCTGGTGTACTTGGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CCA 90 bp CTGTGCGTTGCGTGGCACCAGTGCCCTGGAGGAGCCCACGCGGCGTaGCTCCACCTCAGTGGCACCATCAAACTTCTCCTTCAGTGCGTG +
Preference number: 5 (lower is better)
Translates to: LCVAWHQCPGGAHAA*LHLSGTIKLLLQCV
Trigger: CACGCACTGAAGGAGAAGTTTGATGGTGCCACTGAGGTGGAGCCACGCCGCGTGGGCTCCTCCAGGGCACTGGTGCCACGCAACGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CCA 90 bp GGGCCTCCCCAGCTTTGGGCAGCTTGGGACAGTGGCCCGAGACTGTaGGAATCCGAAACCTCGCTTCTGGCTAGCCACAAGGTCTGGGCG +
Preference number: 5 (lower is better)
Translates to: GPPQLWAAWDSGPRL*ESETSLLASHKVWA
Trigger: CGCCCAGACCTTGTGGCTAGCCAGAAGCGAGGTTTCGGATTCCCACAGTCTCGGGCCACTGTCCCAAGCTGCCCAAAGCTGGGGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS-3UTR CAA 90 bp GGATCCCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTGGGTCTGGGGAGGCCAGGTACAGCCAGTaGCTCGCGGCGGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: GSLVQDGSLYACLGGSGEARYSQ*LAAAEK
Trigger: CTTCTCAGCCGCCGCGAGCAACTGGCTGTACCTGGC...CTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp ATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAACTGGACGAGGCCCCCTaGCTTCTCTCCCGCACATCC +
Preference number: 5 (lower is better)
Translates to: MRAASGTSKVPLVSGSHKLDEAP*LLSRTS
Trigger: GGATGTGCGGGAGAGAAGCAAGGGGGCCTCGTCCAG...TTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS TCA 90 bp GGCACTCCTCAATGGCCAGCTGGGCACCGCGGCGCACCGAGTCCATaGCTTCCAGGTTCCGCTTGCACATCTGCACCTGCCTCTGGATCA +
Preference number: 5 (lower is better)
Translates to: GTPQWPAGHRGAPSP*LPGSACTSAPASGS
Trigger: TGATCCAGAGGCAGGTGCAGATGTGCAAGCGGAACCTGGAAGTCATGGACTCGGTGCGCCGCGGTGCCCAGCTGGCCATTGAGGAGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290167.11
ENST00000415567.1
ENST00000441048.1
CDS-3UTR CAA 90 bp AGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTCAGCACTGGCGGTGGTaGGCCTGGGCAGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: SGTSKVPLVSGSHKGPGFQHWRW*AWAVVP
Trigger: AGGAACCACTGCCCAGGCCAACCACCGCCAGTGCTG...AAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS GCA 90 bp CCGCGGCGCACCGAGTCCATGACTTCCAGGTTCCGCTTGCACATCTaGACCTGCCTCTGGATCAGGCCCTTGAGTTTCTCGCACGTCTCC +
Preference number: 5 (lower is better)
Translates to: PRRTESMTSRFRLHI*TCLWIRPLSFSHVS
Trigger: GGAGACGTGCGAGAAACTCAAGGGCCTGATCCAGAGGCAGGTGCAGATGTGCAAGCGGAACCTGGAAGTCATGGACTCGGTGCGCCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290167.11
ENST00000415567.1
ENST00000441048.1
CDS GCA 90 bp CACTGTCTCCTCCATGCCAGGCTTTGCCACCTTGCGTCACCACCTTaGCGAAGACGGGCAAGGAGTCGAGTGTGGAGCAGTTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: HCLLHARLCHLASPP*RRRARSRVWSSSSA
Trigger: GGCGCTGGAACTGCTCCACACTCGACTCCTTGCCCGTCTTCGGCAAGGTGGTGACGCAAGGTGGCAAAGCCTGGCATGGAGGAGACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS TCA 90 bp CCAGGTTCCGCTTGCACATCTGCACCTGCCTCTGGATCAGGCCCTTaGGTTTCTCGCACGTCTCCTCCTCTGAGATGCTCCCCACCGACG +
Preference number: 5 (lower is better)
Translates to: PGSACTSAPASGSGP*VSRTSPPLRCSPPT
Trigger: CGTCGGTGGGGAGCATCTCAGAGGAGGAGACGTGCGAGAAACTCAAGGGCCTGATCCAGAGGCAGGTGCAGATGTGCAAGCGGAACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290167.11
ENST00000415567.1
ENST00000441048.1
CDS TCA 90 bp CTGCCTCTGGATCAGGCCCTTGAGTTTCTCGCACGTCTCCTCCTCTaGGATGCTCCCCACCGACGACAGCTTGGCCAGGTACCTCCCTAC +
Preference number: 5 (lower is better)
Translates to: LPLDQALEFLARLLL*DAPHRRQLGQVPPY
Trigger: GTAGGGAGGTACCTGGCCAAGCTGTCGTCGGTGGGGAGCATCTCAGAGGAGGAGACGTGCGAGAAACTCAAGGGCCTGATCCAGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS GCA 90 bp GGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCACTAGGTGGTTaGCGGCGCAGGGCTAGGCAGGCGGTCATCGGCACGTGTGCAACT +
Preference number: 5 (lower is better)
Translates to: GRLFKLSAFPGPLGG*RRRARQAVIGTCAT
Trigger: AGTTGCACACGTGCCGATGACCGCCTGCCTAGCCCTGCGCCGGCAACCACCTAGTGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CCA 90 bp CCCAAAGGTAAGGAGGGCTTCTCATGGGGTCCTGAGTACCCACGATaGCTTCAGGCCAGCATTGCCCCAGGCTACCTCCTTCCTTGCGCC +
Preference number: 5 (lower is better)
Translates to: PKGKEGFSWGPEYPR*LQASIAPGYLLPCA
Trigger: GGCGCAAGGAAGGAGGTAGCCTGGGGCAATGCTGGCCTGAAGCCATCGTGGGTACTCAGGACCCCATGAGAAGCCCTCCTTACCTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS CCA 90 bp AGACTGTGGGAATCCGAAACCTCGCTTCTGGCTAGCCACAAGGTCTaGGCGCGCCCCAGGCAGCAGGGTCTTGACTCTGAGCCTCCGTTT +
Preference number: 5 (lower is better)
Translates to: RLWESETSLLASHKV*ARPRQQGLDSEPPF
Trigger: AAACGGAGGCTCAGAGTCAAGACCCTGCTGCCTGGGGCGCGCCCAGACCTTGTGGCTAGCCAGAAGCGAGGTTTCGGATTCCCACAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS-3UTR CAA 90 bp TCTTTCCTCAGAGCCTGTTCTGCCCTTAGGAACCATGTGGGCTCCAGCTCAGCCCGCCTCCCGAGTCCCTaGCGTCACCACCTTGCCGAA +
Preference number: 5 (lower is better)
Translates to: SFLRACSALRNHVGSSSARLPSP*RHHLAE
Trigger: TTCGGCAAGGTGGTGACGCAAGGGACTCGGGAGGCG...GGCTGAGCTGGAGCCCACATGGTTCCTAAGGGCAGAACAGGCTCTGAGGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp AAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGGGCTCGGCCTTGGACGTCTTGTaGCATGTGCGGCCCCTCGTG +
Preference number: 5 (lower is better)
Translates to: KGKVLIHACPSHKPGRGSALDVL*HVRPLV
Trigger: CACGAGGGGCCGCACATGCAACAAGACGTCCAAGGC...CGAGCCCCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp AGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTCGAGAGGAGAGTGGTTaGGGCAGGATGTGGACCCTC +
Preference number: 5 (lower is better)
Translates to: SGTSKVPLVSGSHKGPGFREESG*GRMWTL
Trigger: GAGGGTCCACATCCTGCCCAAACCACTCTCCTCTCG...AAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp GCACCTGCCGAGTGTGACTGGCTTAGTCTCGGCACCTTGACATGTCCCTCTCCAGGTGTGGGTGCCCCCTaGGTTCCTCCCCCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: APAECDWLSLGTLTCPSPGVGAP*VPPPKV
Trigger: TACCTTTGGGGGAGGAACCAAGGGGGCACCCACACC...TGGAGAGGGACATGTCAAGGTGCCGAGACTAAGCCAGTCACACTCGGCAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS TCA 90 bp CTGCCTCTGGATCAGGCCCTTGAGTTTCTCGCACGTCTCCTCCTCTaGGATGCTCCCCACCGACGACAGCTTGGCCAGGTACAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: LPLDQALEFLARLLL*DAPHRRQLGQVQPV
Trigger: AACTGGCTGTACCTGGCCAAGCTGTCGTCGGTGGGGAGCATCTCAGAGGAGGAGACGTGCGAGAAACTCAAGGGCCTGATCCAGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp GGGAGAGTGGCTCAGCTCTTTCCTCTGGGAGGGGAGGGGTCCTCATTGTTCCCTTCATCTGTGTGCGGCTaGAACTGTGCGTTGCGTGGC +
Preference number: 5 (lower is better)
Translates to: GRVAQLFPLGGEGSSLFPSSVCG*NCALRG
Trigger: GCCACGCAACGCACAGTTCAAGCCGCACACAGATGA...AGGGAACAATGAGGACCCCTCCCCTCCCAGAGGAAAGAGCTGAGCCACTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAGGGTCAGGCCCAGGTaGCTGGTGCTGTCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPRVRPR*LVLSLG
Trigger: CCCAAGAGACAGCACCAGCAACCTGGGCCTGACCCT...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp AGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGGCCCAGGCTTTTCCCCCTGGGACAGTTaGGAGCTGGGCATGTCCAAA +
Preference number: 5 (lower is better)
Translates to: SGTSKVPLVSGSHKGPGFSPWDS*ELGMSK
Trigger: TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGA...AAAGCCTGGGCCTTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS GCA 90 bp CCTAGTAGGAATCTCAGTGTCCCTCAGATGCTGAGCCGGTGTGGGTaGCCCCTTGGTTCCTCCCCCAAAGGTAAGGAGGGCTTCTCATGG +
Preference number: 5 (lower is better)
Translates to: PSRNLSVPQMLSRCG*PLGSSPKGKEGFSW
Trigger: CCATGAGAAGCCCTCCTTACCTTTGGGGGAGGAACCAAGGGGGCACCCACACCGGCTCAGCATCTGAGGGACACTGAGATTCCTACTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CAA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTCCTTGCGTCACCACCTaGCCGAAGACGGGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTPCVTT*PKTGKE
Trigger: CTCCTTGCCCGTCTTCGGCAAGGTGGTGACGCAAGG...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAGACACCCCGTGGCACTaGCATTCCACCCGCATGTGT +
Preference number: 5 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPDTPWH*HSTRMC
Trigger: ACACATGCGGGTGGAATGCAAGTGCCACGGGGTGTC...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAGTGATGGTTTGGCGGTaGTACAGGGTCAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPVMVWR*YRVRPR
Trigger: CCTGGGCCTGACCCTGTACAACCGCCAAACCATCAC...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp GACTCCACCAGTCAGACTTTAGTCCAGAGCAGGTACCACCCAGGCCTAGTAGGAGGCTTCAGGCCAGCATaGCCCCAGGCTACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: DSTSQTLVQSRYHPGLVGGFRPA*PQATSF
Trigger: GAAGGAGGTAGCCTGGGGCAATGCTGGCCTGAAGCC...TCCTACTAGGCCTGGGTGGTACCTGCTCTGGACTAAAGTCTGACTGGTGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CAA 90 bp TGGGTCAAGGGCAAGGTCTTGATCCATGCATGTCCTTCTCACAAGCCTGGGCGGCTCTGGATCAGGCCCTaGAGTTTCTCGCACGTCTCC +
Preference number: 5 (lower is better)
Translates to: WVKGKVLIHACPSHKPGRLWIRP*SFSHVS
Trigger: GGAGACGTGCGAGAAACTCAAGGGCCTGATCCAGAG...CCGCCCAGGCTTGTGAGAAGGACATGCATGGATCAAGACCTTGCCCTTGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp GCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACCCCAGGGACTCTTGGTGCCCTTGGGGTaGCCTGCCTGGTTTCGGCAA +
Preference number: 5 (lower is better)
Translates to: AVSWEILQYLWYLGPQGLLVPLG*PAWFRQ
Trigger: TTGCCGAAACCAGGCAGGCAACCCCAAGGGCACCAA...GAGTCCCTGGGGTCCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp CCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGCCCTGGTTGGTGCCCTaGGGGTTGCCTGCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: PGCWCCLLGNLAVPMVPGPWLVP*GLPAWF
Trigger: AAACCAGGCAGGCAACCCCAAGGGCACCAACCAGGG...CCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp TCTCTTGGGGTAGGTGGTGGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCAACAAAGGCCCAGGCTTaGGGGAGGCCCTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SLGVGGGRLFKLSAFPGPTKAQA*GRPWLV
Trigger: CACCAACCAGGGCCTCCCCAAAGCCTGGGCCTTTGT...TGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCCACCACCTACCCCAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp ATGCGGGCAGCCAGCGGCACGAGCAAGGTCCCTTTGGTCAGTGGCAGCCACAAAGTCAAGGGCAAGGTCTaGATCCATGCATGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: MRAASGTSKVPLVSGSHKVKGKV*IHACPS
Trigger: AGAAGGACATGCATGGATCAAGACCTTGCCCTTGAC...TTTGTGGCTGCCACTGACCAAAGGGACCTTGCTCGTGCCGCTGGCTGCCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp GGATCCCTGGTCCAGGATGGCAGCCTATATGCCTGCCTAGGTGGGTCTGGGGAGGCACCTCACTTGGTTTaGGCTTCCTCCTTGTATGGA +
Preference number: 5 (lower is better)
Translates to: GSLVQDGSLYACLGGSGEAPHLV*ASSLYG
Trigger: TCCATACAAGGAGGAAGCCAAAACCAAGTGAGGTGC...CTCCCCAGACCCACCTAGGCAGGCATATAGGCTGCCATCCTGGACCAGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAGGCATCACCTTTGCCTaGGGACGAGAGGAGAGTGGT +
Preference number: 5 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPGITFA*GREESG
Trigger: ACCACTCTCCTCTCGTCCCAAGGCAAAGGTGATGCC...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp CGTAAAAGGGAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGCCAGGCTTTGCCACCTaGCGTCACCACCTTGCCGAA +
Preference number: 5 (lower is better)
Translates to: RKREEFDEWAELSLLLQVPGFAT*RHHLAE
Trigger: TTCGGCAAGGTGGTGACGCAAGGTGGCAAAGCCTGG...CACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTCCCTTTTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS GCA 90 bp CCAGGCTACCTCCTTCCTTGCGCCTTTGAGTCCTCTCCCCTGACCTaGTTTCTGTCAGTAGATGACATCCACTGTCTCCTCCATGCCAGG +
Preference number: 5 (lower is better)
Translates to: PGYLLPCAFESSPLT*FLSVDDIHCLLHAR
Trigger: CCTGGCATGGAGGAGACAGTGGATGTCATCTACTGACAGAAAGCAGGTCAGGGGAGAGGACTCAAAGGCGCAAGGAAGGAGGTAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CAA 90 bp CGTAAAAGGGAGGAGTTTGATGAGTGGGCAGAGCTCAGCCTCCTTCTCCAGGTGCTCTGGATCAGGCCCTaGAGTTTCTCGCACGTCTCC +
Preference number: 5 (lower is better)
Translates to: RKREEFDEWAELSLLLQVLWIRP*SFSHVS
Trigger: GGAGACGTGCGAGAAACTCAAGGGCCTGATCCAGAG...CACCTGGAGAAGGAGGCTGAGCTCTGCCCACTCATCAAACTCCTCCCTTTTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CAA 90 bp TCTCTTGGGGTAGGTGGTGGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCAATGGCCTTGGACGTCTaGTTGCATGTGCGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: SLGVGGGRLFKLSAFPGPMALDV*LHVRPL
Trigger: GAGGGGCCGCACATGCAACAAGACGTCCAAGGCCAT...TGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCCACCACCTACCCCAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAACTCATCTCCCTCTTCTaGCCTGGAAGGACCCACAGA +
Preference number: 5 (lower is better)
Translates to: CKGCASSPWDSLELGMSKLISLF*PGRTHR
Trigger: TCTGTGGGTCCTTCCAGGCAAGAAGAGGGAGATGAG...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp ACCCCAGGAAGATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCAACCAAGGAGGAGGCTaGGCTGGAGGACTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: TPGRSALGTPWQVKRAVPNQGGG*AGGLFW
Trigger: CCAGAAGAGTCCTCCAGCCAAGCCTCCTCCTTGGTT...GGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGATCTTCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp CCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGGGGGCTCGTGATGGTTaGGCGGTTGTACAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: PGCWCCLLGNLAVPMVPGGARDG*AVVQGQ
Trigger: CTGACCCTGTACAACCGCCAAACCATCACGAGCCCC...CCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp CCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGACAGGAGCCAGGAGCTaGGAGTCTGGGAACCCCAAG +
Preference number: 5 (lower is better)
Translates to: PGCWCCLLGNLAVPMVPGTGARS*ESGNPK
Trigger: CTTGGGGTTCCCAGACTCCAAGCTCCTGGCTCCTGT...CCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp CTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCATCCAGCCTGGACCTACTCTCAGGGCATCACCTTaGCCTTGGGACGAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LAGEKGSSHHTSIQPGPTLRASP*PWDERR
Trigger: TCTCCTCTCGTCCCAAGGCAAAGGTGATGCCCTGAG...AGTAGGTCCAGGCTGGATGCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp GAGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTTGAATTCCCCACCGACGACAGCTaGGCCAGGTACAGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: EKSFCRLEPIFRISDVEFPTDDS*ARYSQL
Trigger: CAACTGGCTGTACCTGGCCAAGCTGTCGTCGGTGGG...GAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp TATGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCATGGGAGAGGACTTTATaGCACAGCCCTTTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: YVRAVPVPPGTVWSWACPWERTL*HSPFLP
Trigger: AGGGAGGAAAGGGCTGTGCAATAAAGTCCTCTCCCA...TGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp CCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGGGGGAGGGGTCCTCATaGTTCCCTCTTTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: PGCWCCLLGNLAVPMVPGGEGSS*FPLSGS
Trigger: AGACCCAGAAAGAGGGAACAATGAGGACCCCTCCCC...CCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp CCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGGCTCCAGCACCTCACTaGGTTTTGGCTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PGCWCCLLGNLAVPMVPGAPAPH*VLASSL
Trigger: CAAGGAGGAAGCCAAAACCAAGTGAGGTGCTGGAGC...CCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp GTTCGACTCCACCAGTCAGACTTTAGTCCAGAGCAGGTACCACCCAGGCCTAGTCTTAGTCTCGGCACCTaGACATGTCCCTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: VRLHQSDFSPEQVPPRPSLSLGT*TCPSPK
Trigger: CTTTGGAGAGGGACATGTCAAGGTGCCGAGACTAAG...ACTAGGCCTGGGTGGTACCTGCTCTGGACTAAAGTCTGACTGGTGGAGTCGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS-3UTR CAA 90 bp TGTAAGGGCTGTGCCAGTTCCCCCTGGGACAGTTTGGAGCTGGGCATGTCCAAAGTCTCTTGGGAAATCTaGCAGTACCTATGGTACCTG +
Preference number: 5 (lower is better)
Translates to: CKGCASSPWDSLELGMSKVSWEI*QYLWYL
Trigger: CAGGTACCATAGGTACTGCAAGATTTCCCAAGAGAC...TTTGGACATGCCCAGCTCCAAACTGTCCCAGGGGGAACTGGCACAGCCCTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp TCTCTTGGGGTAGGTGGTGGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCAATGAACCTGGTGCCCTaGACCTGGTATCTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: SLGVGGGRLFKLSAFPGPMNLVP*TWYLLV
Trigger: AACAAGCAGATACCAGGTCAAGGGCACCAGGTTCAT...TGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCCACCACCTACCCCAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp CCAGGTTGCTGGTGCTGTCTCTTGGGAAATCTTGCAGTACCTATGGTACCTGGGGACTTCAGTCGTCTCTaGCTCTCATCTCCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PGCWCCLLGNLAVPMVPGDFSRL*LSSPSS
Trigger: AGAAGAGGGAGATGAGAGCAAGAGACGACTGAAGTC...CCCAGGTACCATAGGTACTGCAAGATTTCCCAAGAGACAGCACCAGCAACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCCCTTTCTCAGGGCATTaGAGAGACATGGCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSPFSGH*RDMASR
Trigger: CCTAGAAGCCATGTCTCTCAAATGCCCTGAGAAAGG...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp TCTCTTGGGGTAGGTGGTGGGAGACTGTTTAAATTATCGGCCTTCCCTGGGCCAGCAGTTTCTCTACCTTaGGGTACAAGAACCAAGGAG +
Preference number: 5 (lower is better)
Translates to: SLGVGGGRLFKLSAFPGPAVSLP*GTRTKE
Trigger: CTCCTTGGTTCTTGTACCCAAAGGTAGAGAAACTGC...TGGCCCAGGGAAGGCCGATAATTTAAACAGTCTCCCACCACCTACCCCAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCTCCGAATCTCGGACGTaGAATTCAGCCACTGAACAC +
Preference number: 5 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSSESRT*NSATEH
Trigger: GTGTTCAGTGGCTGAATTCAACGTCCGAGATTCGGA...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp GAGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTTGAATTCCAGCTGTGGCGACAGTaGGATCAGCTTTCATCCACA +
Preference number: 5 (lower is better)
Translates to: EKSFCRLEPIFRISDVEFQLWRQ*DQLSST
Trigger: TGTGGATGAAAGCTGATCCAACTGTCGCCACAGCTG...GAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp GAGAAGAGTTTCTGCAGGCTGGAGCCCATATTCCGAATCTCGGACGTTGAATTCCTCCTTGTATGGACATaGAGCAGAGATCTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: EKSFCRLEPIFRISDVEFLLVWT*SRDLGW
Trigger: CCAGCCAAGATCTCTGCTCAATGTCCATACAAGGAG...GAATTCAACGTCCGAGATTCGGAATATGGGCTCCAGCCTGCAGAAACTCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS-3UTR CAA 90 bp ATCAGCTTTAGGAACTCCCTGGCAGGTGAAAAGGGCAGTTCCCATCATACCAGCGATTATCAACCACATTaGAATGTGGCTCCAGCACCT +
Preference number: 5 (lower is better)
Translates to: ISFRNSLAGEKGSSHHTSDYQPH*NVAPAP
Trigger: AGGTGCTGGAGCCACATTCAAATGTGGTTGATAATC...GCTGGTATGATGGGAACTGCCCTTTTCACCTGCCAGGGAGTTCCTAAAGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS GCA 72 bp CGGCCCCTCGTGCCCAGCACGCCGCTGCGCATGTCCTaGTCACAGAAGTCGGGGCTAGGCTCCAAGTACACC +
Preference number: 6 (lower is better)
Translates to: RPLVPSTPLRMS*SQKSGLGSKYT
Trigger: GGTGTACTTGGAGCCTAGCCCCGACTTCTGTGAGCAGGACATGCGCAGCGGCGTGCTGGGCACGAGGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CCA 72 bp CAGCCTTCCGGGAGCTGGACGGGGCCTCCCCAGCTTTaGGCAGCTTGGGACAGTGGCCCGAGACTGTGGGAA +
Preference number: 6 (lower is better)
Translates to: QPSGSWTGPPQL*AAWDSGPRLWE
Trigger: TTCCCACAGTCTCGGGCCACTGTCCCAAGCTGCCCAAAGCTGGGGAGGCCCCGTCCAGCTCCCGGAAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS CCA 72 bp GCTTGGCCAGGTACCTCCCTACAGCCTTCCGGGAGCTaGACGGGGCCTCCCCAGCTTTGGGCAGCTTGGGAC +
Preference number: 6 (lower is better)
Translates to: AWPGTSLQPSGS*TGPPQLWAAWD
Trigger: GTCCCAAGCTGCCCAAAGCTGGGGAGGCCCCGTCCAGCTCCCGGAAGGCTGTAGGGAGGTACCTGGCCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS CAA 72 bp ACAGCCTTCCGGGAGCTGGACGGGGCCTCCCCAGCTTaGGGCAGCTTGGGACAGTGGCCCGAGACTGTGGGA +
Preference number: 6 (lower is better)
Translates to: TAFRELDGASPA*GSLGQWPETVG
Trigger: TCCCACAGTCTCGGGCCACTGTCCCAAGCTGCCCAAAGCTGGGGAGGCCCCGTCCAGCTCCCGGAAGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS TCA 72 bp CAGCTTGGCCAGGTACAGCCAGTTGCTCGCGGCGGCTaGGAAGACGGCGAAGACGAGGAGGCGCAGCGAACG +
Preference number: 6 (lower is better)
Translates to: QLGQVQPVARGG*EDGEDEEAQRT
Trigger: CGTTCGCTGCGCCTCCTCGTCTTCGCCGTCTTCTCAGCCGCCGCGAGCAACTGGCTGTACCTGGCCAAGCTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CCA 72 bp GTCCTCATCTGTGTGCGGCTTGAACTGTGCGTTGCGTaGCACCAGTGCCCTGGAGGAGCCCACGCGGCGTGG +
Preference number: 6 (lower is better)
Translates to: VLICVRLELCVA*HQCPGGAHAAW
Trigger: CCACGCCGCGTGGGCTCCTCCAGGGCACTGGTGCCACGCAACGCACAGTTCAAGCCGCACACAGATGAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CAA 72 bp CGGGAGCTGGACGGGGCCTCCCCAGCTTTGGGCAGCTaGGGACAGTGGCCCGAGACTGTGGGAATCCGAAAC +
Preference number: 6 (lower is better)
Translates to: RELDGASPALGS*GQWPETVGIRN
Trigger: GTTTCGGATTCCCACAGTCTCGGGCCACTGTCCCAAGCTGCCCAAAGCTGGGGAGGCCCCGTCCAGCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS TCA 72 bp CAATGGCCAGCTGGGCACCGCGGCGCACCGAGTCCATaGCTTCCAGGTTCCGCTTGCACATCTGCACCTGCC +
Preference number: 6 (lower is better)
Translates to: QWPAGHRGAPSP*LPGSACTSAPA
Trigger: GGCAGGTGCAGATGTGCAAGCGGAACCTGGAAGTCATGGACTCGGTGCGCCGCGGTGCCCAGCTGGCCATTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290167.11
ENST00000415567.1
ENST00000441048.1
CDS GCA 72 bp CGAAGGCCGCCTCCCGAGTCCCTTGCGTCACCACCTTaGCGAAGACGGGCAAGGAGTCGAGTGTGGAGCAGT +
Preference number: 6 (lower is better)
Translates to: RRPPPESLASPP*RRRARSRVWSS
Trigger: ACTGCTCCACACTCGACTCCTTGCCCGTCTTCGGCAAGGTGGTGACGCAAGGGACTCGGGAGGCGGCCTTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CCA 72 bp GCGTGGCACCAGTGCCCTGGAGGAGCCCACGCGGCGTaGCTCCACCTCAGTGGCACCATCAAACTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: AWHQCPGGAHAA*LHLSGTIKLLL
Trigger: AAGGAGAAGTTTGATGGTGCCACTGAGGTGGAGCCACGCCGCGTGGGCTCCTCCAGGGCACTGGTGCCACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CAA 72 bp ACGAAGGCCGCCTCCCGAGTCCCTTGCGTCACCACCTaGCCGAAGACGGGCAAGGAGTCGAGTGTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: TKAASRVPCVTT*PKTGKESSVEQ
Trigger: CTGCTCCACACTCGACTCCTTGCCCGTCTTCGGCAAGGTGGTGACGCAAGGGACTCGGGAGGCGGCCTTCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CAA 72 bp ACCAGGTCCTCATCTGTGTGCGGCTTGAACTGTGCGTaGCGTGGCACCAGTGCCCTGGAGGAGCCCACGCGG +
Preference number: 6 (lower is better)
Translates to: TRSSSVCGLNCA*RGTSALEEPTR
Trigger: CCGCGTGGGCTCCTCCAGGGCACTGGTGCCACGCAACGCACAGTTCAAGCCGCACACAGATGAGGACCTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CAA 90 bp TCCAAGTACACCAGGTCCTCATCTGTGTGCGGCTTGAACTGTGCGTaGCGTGGCACCAGTGCCCTGGAGGAGCCCACGCGGCGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: SKYTRSSSVCGLNCA*RGTSALEEPTRRGS
Trigger: GGAGCCACGCCGCGTGGGCTCCTCCAGGGCACTGGTGCCACGCAACGCACAGTTCAAGCCGCACACAGATGAGGACCTGGTGTACTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CAA 90 bp ACAGCCTTCCGGGAGCTGGACGGGGCCTCCCCAGCTTTGGGCAGCTaGGGACAGTGGCCCGAGACTGTGGGAATCCGAAACCTCGCTTCT +
Preference number: 6 (lower is better)
Translates to: TAFRELDGASPALGS*GQWPETVGIRNLAS
Trigger: AGAAGCGAGGTTTCGGATTCCCACAGTCTCGGGCCACTGTCCCAAGCTGCCCAAAGCTGGGGAGGCCCCGTCCAGCTCCCGGAAGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS CAA 90 bp TACCTCCCTACAGCCTTCCGGGAGCTGGACGGGGCCTCCCCAGCTTaGGGCAGCTTGGGACAGTGGCCCGAGACTGTGGGAATCCGAAAC +
Preference number: 6 (lower is better)
Translates to: YLPTAFRELDGASPA*GSLGQWPETVGIRN
Trigger: GTTTCGGATTCCCACAGTCTCGGGCCACTGTCCCAAGCTGCCCAAAGCTGGGGAGGCCCCGTCCAGCTCCCGGAAGGCTGTAGGGAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS CCA 72 bp CCCTGGAGGAGCCCACGCGGCGTGGCTCCACCTCAGTaGCACCATCAAACTTCTCCTTCAGTGCGTGACCCA +
Preference number: 6 (lower is better)
Translates to: PWRSPRGVAPPQ*HHQTSPSVRDP
Trigger: TGGGTCACGCACTGAAGGAGAAGTTTGATGGTGCCACTGAGGTGGAGCCACGCCGCGTGGGCTCCTCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CCA 72 bp GACGGGGCCTCCCCAGCTTTGGGCAGCTTGGGACAGTaGCCCGAGACTGTGGGAATCCGAAACCTCGCTTCT +
Preference number: 6 (lower is better)
Translates to: DGASPALGSLGQ*PETVGIRNLAS
Trigger: AGAAGCGAGGTTTCGGATTCCCACAGTCTCGGGCCACTGTCCCAAGCTGCCCAAAGCTGGGGAGGCCCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS CAA 72 bp CCGCGGCGCACCGAGTCCATGACTTCCAGGTTCCGCTaGCACATCTGCACCTGCCTCTGGATCAGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: PRRTESMTSRFR*HICTCLWIRPL
Trigger: CAAGGGCCTGATCCAGAGGCAGGTGCAGATGTGCAAGCGGAACCTGGAAGTCATGGACTCGGTGCGCCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290167.11
ENST00000415567.1
ENST00000441048.1
CDS CAA 90 bp TCGGGGCTAGGCTCCAAGTACACCAGGTCCTCATCTGTGTGCGGCTaGAACTGTGCGTTGCGTGGCACCAGTGCCCTGGAGGAGCCCACG +
Preference number: 6 (lower is better)
Translates to: SGLGSKYTRSSSVCG*NCALRGTSALEEPT
Trigger: CGTGGGCTCCTCCAGGGCACTGGTGCCACGCAACGCACAGTTCAAGCCGCACACAGATGAGGACCTGGTGTACTTGGAGCCTAGCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CAA 90 bp AGCTGGGCACCGCGGCGCACCGAGTCCATGACTTCCAGGTTCCGCTaGCACATCTGCACCTGCCTCTGGATCAGGCCCTTGAGTTTCTCG +
Preference number: 6 (lower is better)
Translates to: SWAPRRTESMTSRFR*HICTCLWIRPLSFS
Trigger: CGAGAAACTCAAGGGCCTGATCCAGAGGCAGGTGCAGATGTGCAAGCGGAACCTGGAAGTCATGGACTCGGTGCGCCGCGGTGCCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290167.11
ENST00000415567.1
ENST00000441048.1
CDS GCA 72 bp CATCCTGACCACTGGAAGCCCTGTGGGCTGACCCCATaGACTGTCCTGTCACAGCCGCACTTCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: HPDHWKPCGLTP*TVLSQPHFSSS
Trigger: GGAGCTGGAGAAGTGCGGCTGTGACAGGACAGTGCATGGGGTCAGCCCACAGGGCTTCCAGTGGTCAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS GCA 72 bp TTTAAATTATCGGCCTTCCCTGGGCCACTAGGTGGTTaGCGGCGCAGGGCTAGGCAGGCGGTCATCGGCACG +
Preference number: 6 (lower is better)
Translates to: FKLSAFPGPLGG*RRRARQAVIGT
Trigger: CGTGCCGATGACCGCCTGCCTAGCCCTGCGCCGGCAACCACCTAGTGGCCCAGGGAAGGCCGATAATTTAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CCA 72 bp GAATCCGAAACCTCGCTTCTGGCTAGCCACAAGGTCTaGGCGCGCCCCAGGCAGCAGGGTCTTGACTCTGAG +
Preference number: 6 (lower is better)
Translates to: ESETSLLASHKV*ARPRQQGLDSE
Trigger: CTCAGAGTCAAGACCCTGCTGCCTGGGGCGCGCCCAGACCTTGTGGCTAGCCAGAAGCGAGGTTTCGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS CAA 72 bp CCTCCATGCCAGGCTTTGCCACCTTGCGTCACCACCTaGCCGAAGACGGGCAAGGAGTCGAGTGTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: PPCQALPPCVTT*PKTGKESSVEQ
Trigger: CTGCTCCACACTCGACTCCTTGCCCGTCTTCGGCAAGGTGGTGACGCAAGGTGGCAAAGCCTGGCATGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS CAA 90 bp GCTTCTCATGGGGTCCTGAGTACCCACGATGGCTTCAGGCCAGCATaGCCCCAGGCTACCTCCTTCCTTGCGCCTTTGAGTCCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: ASHGVLSTHDGFRPA*PQATSFLAPLSPLP
Trigger: GGGGAGAGGACTCAAAGGCGCAAGGAAGGAGGTAGCCTGGGGCAATGCTGGCCTGAAGCCATCGTGGGTACTCAGGACCCCATGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS TCA 72 bp GAAGGCCACACCGTAGGCGATGTTGTCAGAGCATCCTaGCCACTGGAAGCCCTGTGGGCTGACCCCATGCAC +
Preference number: 6 (lower is better)
Translates to: EGHTVGDVVRAS*PLEALWADPMH
Trigger: GTGCATGGGGTCAGCCCACAGGGCTTCCAGTGGTCAGGATGCTCTGACAACATCGCCTACGGTGTGGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS TCA 72 bp GCTCCAAGTACACCAGGTCCTCATCTGTGTGCGGCTTaGACTGTGCGTTGCGTGGCACCAGTGCCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: APSTPGPHLCAA*TVRCVAPVPWR
Trigger: CCTCCAGGGCACTGGTGCCACGCAACGCACAGTTCAAGCCGCACACAGATGAGGACCTGGTGTACTTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS GCA 72 bp GGGCTAGGCTCCAAGTACACCAGGTCCTCATCTGTGTaGGGCTTGAACTGTGCGTTGCGTGGCACCAGTGCC +
Preference number: 6 (lower is better)
Translates to: GLGSKYTRSSSV*GLNCALRGTSA
Trigger: GGCACTGGTGCCACGCAACGCACAGTTCAAGCCGCACACAGATGAGGACCTGGTGTACTTGGAGCCTAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS GCA 72 bp CTCCATGCCAGGCTTTGCCACCTTGCGTCACCACCTTaGCGAAGACGGGCAAGGAGTCGAGTGTGGAGCAGT +
Preference number: 6 (lower is better)
Translates to: LHARLCHLASPP*RRRARSRVWSS
Trigger: ACTGCTCCACACTCGACTCCTTGCCCGTCTTCGGCAAGGTGGTGACGCAAGGTGGCAAAGCCTGGCATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS GCA 72 bp AATCTCAGTGTCCCTCAGATGCTGAGCCGGTGTGGGTaGCCCCTTGGTTCCTCCCCCAAAGGTAAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: NLSVPQMLSRCG*PLGSSPKGKEG
Trigger: GCCCTCCTTACCTTTGGGGGAGGAACCAAGGGGGCACCCACACCGGCTCAGCATCTGAGGGACACTGAGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS CAA 72 bp GGCTCCAAGTACACCAGGTCCTCATCTGTGTGCGGCTaGAACTGTGCGTTGCGTGGCACCAGTGCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: GSKYTRSSSVCG*NCALRGTSALE
Trigger: CTCCAGGGCACTGGTGCCACGCAACGCACAGTTCAAGCCGCACACAGATGAGGACCTGGTGTACTTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CAA 72 bp GGGGTCCTGAGTACCCACGATGGCTTCAGGCCAGCATaGCCCCAGGCTACCTCCTTCCTTGCGCCTTTGAGT +
Preference number: 6 (lower is better)
Translates to: GVLSTHDGFRPA*PQATSFLAPLS
Trigger: ACTCAAAGGCGCAAGGAAGGAGGTAGCCTGGGGCAATGCTGGCCTGAAGCCATCGTGGGTACTCAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS CAA 90 bp TCCAGGTTCCGCTTGCACATCTGCACCTGCCTCTGGATCAGGCCCTaGAGTTTCTCGCACGTCTCCTCCTCTGAGATGCTCCCCACCGAC +
Preference number: 6 (lower is better)
Translates to: SRFRLHICTCLWIRP*SFSHVSSSEMLPTD
Trigger: GTCGGTGGGGAGCATCTCAGAGGAGGAGACGTGCGAGAAACTCAAGGGCCTGATCCAGAGGCAGGTGCAGATGTGCAAGCGGAACCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290167.11
ENST00000415567.1
ENST00000441048.1
CDS TCA 72 bp GATCAGGCCCTTGAGTTTCTCGCACGTCTCCTCCTCTaGGATGCTCCCCACCGACGACAGCTTGGCCAGGTA +
Preference number: 6 (lower is better)
Translates to: DQALEFLARLLL*DAPHRRQLGQV
Trigger: TACCTGGCCAAGCTGTCGTCGGTGGGGAGCATCTCAGAGGAGGAGACGTGCGAGAAACTCAAGGGCCTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290167.11
ENST00000415567.1
ENST00000441048.1
CDS CCA 72 bp AAGGAGGGCTTCTCATGGGGTCCTGAGTACCCACGATaGCTTCAGGCCAGCATTGCCCCAGGCTACCTCCTT +
Preference number: 6 (lower is better)
Translates to: KEGFSWGPEYPR*LQASIAPGYLL
Trigger: AAGGAGGTAGCCTGGGGCAATGCTGGCCTGAAGCCATCGTGGGTACTCAGGACCCCATGAGAAGCCCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS CCA 72 bp CTTGGTTCCTCCCCCAAAGGTAAGGAGGGCTTCTCATaGGGTCCTGAGTACCCACGATGGCTTCAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LGSSPKGKEGFS*GPEYPRWLQAS
Trigger: GCTGGCCTGAAGCCATCGTGGGTACTCAGGACCCCATGAGAAGCCCTCCTTACCTTTGGGGGAGGAACCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS CCA 72 bp CAGCTTTGGGCAGCTTGGGACAGTGGCCCGAGACTGTaGGAATCCGAAACCTCGCTTCTGGCTAGCCACAAG +
Preference number: 6 (lower is better)
Translates to: QLWAAWDSGPRL*ESETSLLASHK
Trigger: CTTGTGGCTAGCCAGAAGCGAGGTTTCGGATTCCCACAGTCTCGGGCCACTGTCCCAAGCTGCCCAAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441048.1
CDS CAA 72 bp TGGAGGTTCATGAGGGCTCTGCTGGACGAGGCCCCCTaGCTTCTCTCCCGCACATCCACAAACGACTGTGAG +
Preference number: 6 (lower is better)
Translates to: WRFMRALLDEAP*LLSRTSTNDCE
Trigger: CTCACAGTCGTTTGTGGATGTGCGGGAGAGAAGCAAGGGGGCCTCGTCCAGCAGAGCCCTCATGAACCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS CCA 72 bp ACTTCCAGGTTCCGCTTGCACATCTGCACCTGCCTCTaGATCAGGCCCTTGAGTTTCTCGCACGTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: TSRFRLHICTCL*IRPLSFSHVSS
Trigger: GGAGGAGACGTGCGAGAAACTCAAGGGCCTGATCCAGAGGCAGGTGCAGATGTGCAAGCGGAACCTGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290167.11
ENST00000415567.1
ENST00000441048.1
CDS CAA 72 bp CGCTTGCACATCTGCACCTGCCTCTGGATCAGGCCCTaGAGTTTCTCGCACGTCTCCTCCTCTGAGATGCTC +
Preference number: 6 (lower is better)
Translates to: RLHICTCLWIRP*SFSHVSSSEML
Trigger: GAGCATCTCAGAGGAGGAGACGTGCGAGAAACTCAAGGGCCTGATCCAGAGGCAGGTGCAGATGTGCAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290167.11
ENST00000415567.1
ENST00000441048.1
CDS CAA 90 bp TCATTGTTGTGGAGGTTCATGAGGGCTCTGCTGGACGAGGCCCCCTaGCTTCTCTCCCGCACATCCACAAACGACTGTGAGAAGGCCACA +
Preference number: 6 (lower is better)
Translates to: SLLWRFMRALLDEAP*LLSRTSTNDCEKAT
Trigger: TGTGGCCTTCTCACAGTCGTTTGTGGATGTGCGGGAGAGAAGCAAGGGGGCCTCGTCCAGCAGAGCCCTCATGAACCTCCACAACAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290167.11
CDS TCA 72 bp CAGCATTGCCCCAGGCTACCTCCTTCCTTGCGCCTTTaGGTCCTCTCCCCTGACCTGCTTTCTGTCAGTAGA +
Preference number: 6 (lower is better)
Translates to: QHCPRLPPSLRL*VLSPDLLSVSR
Trigger: TCTACTGACAGAAAGCAGGTCAGGGGAGAGGACTCAAAGGCGCAAGGAAGGAGGTAGCCTGGGGCAATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415567.1
CDS GCA 72 bp ACCGAGTCCATGACTTCCAGGTTCCGCTTGCACATCTaGACCTGCCTCTGGATCAGGCCCTTGAGTTTCTCG +
Preference number: 6 (lower is better)
Translates to: TESMTSRFRLHI*TCLWIRPLSFS
Trigger: CGAGAAACTCAAGGGCCTGATCCAGAGGCAGGTGCAGATGTGCAAGCGGAACCTGGAAGTCATGGACTCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290167.11
ENST00000415567.1
ENST00000441048.1
CDS GCA 72 bp CTCCTTCCTTGCGCCTTTGAGTCCTCTCCCCTGACCTaGTTTCTGTCAGTAGATGACATCCACTGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: LLPCAFESSPLT*FLSVDDIHCLL
Trigger: GAGGAGACAGTGGATGTCATCTACTGACAGAAAGCAGGTCAGGGGAGAGGACTCAAAGGCGCAAGGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415567.1