RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WNT10B (Homo sapiens)

Ensembl gene IDs: ENSG00000169884

Ensembl transcript IDs: ENST00000301061.9, ENST00000403957.5, ENST00000407467.5, ENST00000413630.1, ENST00000420388.1, ENST00000475740.1

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGTGTCTGCCGGAGCACGTTGTGCCCACGGCCACAGCACAGGCTaGCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGC +
Preference number: 1 (lower is better)
Translates to: LVSAGARCAHGHSTG*HSHPTGGWSCCRPG
Trigger: GCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGACACGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR TCA 90 bp GCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTTGTGGGTATCAATaGAGATGGCCCGGCCCAGCCGCTCCCTCAACGCCGCCCCCACTG +
Preference number: 1 (lower is better)
Translates to: ADGAGRLQNCGCGYQ*RWPGPAAPSTPPPL
Trigger: CAGTGGGGGCGGCGTTGAGGGAGCGGCTGGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR CCA 90 bp CGACGGGGACGCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTTGTaGGTATCAATGAAGATGGCCCGGCCCAGCCGCTCCCTCAACGCC +
Preference number: 1 (lower is better)
Translates to: RRGRRRGWKAPELRL*VSMKMARPSRSLNA
Trigger: GGCGTTGAGGGAGCGGCTGGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCCCCGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR CCA 90 bp ATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCTTGTCCCTaGGGAGCCCATAGTGGGGTCTCGCTCACAGAAGTCAGGAGACTT +
Preference number: 1 (lower is better)
Translates to: IQQAAGLVAGPAPCP*GAHSGVSLTEVRRL
Trigger: AAGTCTCCTGACTTCTGTGAGCGAGACCCCACTATGGGCTCCCCAGGGACAAGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR CCA 90 bp GGTGATCTCTTTCTAGATACAGATCTTATGGCTCCAAACAGTGCCTaGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACT +
Preference number: 1 (lower is better)
Translates to: GDLFLDTDLMAPNSA*GYPSRERSGETIGT
Trigger: AGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCTGTATCTAGAAAGAGATCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp CAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCTCAACGCCGCCCCCACTaGCCGGAACTCTGGGGCCGC +
Preference number: 2 (lower is better)
Translates to: QAATAIQQAAGLVAGPAPQRRPH*PELWGR
Trigger: GCGGCCCCAGAGTTCCGGGCAGTGGGGGCGGCGTTG...AGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR CAA 90 bp CCTGAGAGGCGACGGGGACGCAGACGGGGCTGGAAGGCTCCAGAATaGCGGTTGTGGGTATCAATGAAGATGGCCCGGCCCAGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: PERRRGRRRGWKAPE*RLWVSMKMARPSRS
Trigger: GGAGCGGCTGGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCCCCGTCGCCTCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp ACAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCGGTTGTGGGTATCAATaGAGATGGCCCGGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: TGCHSHPTGGWSCCRPGPGCGYQ*RWPGPA
Trigger: GGCTGGGCCGGGCCATCTTCATTGATACCCACAACC...GGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR CAA 90 bp AGGCGACGGGGACGCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTaGTGGGTATCAATGAAGATGGCCCGGCCCAGCCGCTCCCTCAAC +
Preference number: 2 (lower is better)
Translates to: RRRGRRRGWKAPELR*WVSMKMARPSRSLN
Trigger: GTTGAGGGAGCGGCTGGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCCCCGTCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp GCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGGTAGACCAGCTCTCCTaGGAGGCGACGGGGACGCAG +
Preference number: 2 (lower is better)
Translates to: AWGYPSRERSGETIGTPQVDQLS*EATGTQ
Trigger: CTGCGTCCCCGTCGCCTCTCAGGAGAGCTGGTCTAC...CTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp TGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACAACTCTCTGAGGATTCAGCAACGCCGCCCCCACTaGCCGGAACTCTGGGGCCGC +
Preference number: 2 (lower is better)
Translates to: WKETTSLRAWTDNSLRIQQRRPH*PELWGR
Trigger: GCGGCCCCAGAGTTCCGGGCAGTGGGGGCGGCGTTG...CTGAATCCTCAGAGAGTTGTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407467.5
3UTR-3UTR CCA 90 bp GTCCCTGGGGAGCCCATAGTGGGGTCTCGCTCACAGAAGTCAGGAGACTTCTCAGGACGCAGACGGGGCTaGAAGGCTCCAGAATTGCGG +
Preference number: 2 (lower is better)
Translates to: VPGEPIVGSRSQKSGDFSGRRRG*KAPELR
Trigger: CCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCC...TGAGAAGTCTCCTGACTTCTGTGAGCGAGACCCCACTATGGGCTCCCCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp AAGGGCCTGGACAGACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACCGCTCAACTCGTGTCTaGCGGAGCACGTTGTGCCCA +
Preference number: 2 (lower is better)
Translates to: KGLDRQLSEDSGESAPQHRSTRV*RSTLCP
Trigger: TGGGCACAACGTGCTCCGGCAGACACGAGTTGAGCG...GTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTCTGTCCAGGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407467.5
3UTR-3UTR GCA 90 bp CTAGATACAGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGGGCGGCTGGTCTTGTTaGAGGCCCGGCCCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: LDTDLMAPNSAWGYPSREGGWSC*RPGPLS
Trigger: GGACAAGGGGCCGGGCCTGCAACAAGACCAGCCGCC...CTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCTGTATCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp AGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGGGCCACAGCACAGGCTaGCACAGCCATCCAACAGGC +
Preference number: 2 (lower is better)
Translates to: RSYGSKQCLGLSLKGEEWGHSTG*HSHPTG
Trigger: GCCTGTTGGATGGCTGTGGCAGCCTGTGCTGTGGCC...CCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp CCCCAAGGTAAGGCTGACCCTCACTTACACACATTCACCCACTCTGTAACCTTGTGCCGGAGCACGTTGTaGCCACGGCCACAGCACAGG +
Preference number: 2 (lower is better)
Translates to: PQGKADPHLHTFTHSVTLCRSTL*PRPQHR
Trigger: CCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCA...CAAGGTTACAGAGTGGGTGAATGTGTGTAAGTGAGGGTCAGCCTTACCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CCA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTAGGACGCAGACGGGGCTaGAAGGCTCCAGAATTGCGG +
Preference number: 2 (lower is better)
Translates to: PSRERSGETIGTPQPKGVGRRRG*KAPELR
Trigger: CCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCC...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CCA 90 bp TCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACCCGGCCCCTTGTCCCTaGGGAGCCCATAGTGGGGTC +
Preference number: 2 (lower is better)
Translates to: SPLTSEWKETTSLRAWTDPAPCP*GAHSGV
Trigger: GACCCCACTATGGGCTCCCCAGGGACAAGGGGCCGG...GTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407467.5
3UTR-3UTR CCA 90 bp TGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTACATCCAACAGGCGGCTaGTCTTGTTGCAGGCCCGGC +
Preference number: 2 (lower is better)
Translates to: WLQTVPGVIPQGRGVVKLHPTGG*SCCRPG
Trigger: GCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATG...TAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp ATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGATCCCAGAGTCCACCTaGCCCCCACCACCCCTAAAG +
Preference number: 2 (lower is better)
Translates to: ILWLQTVPGVIPQGRGVVIPEST*PPPPLK
Trigger: CTTTAGGGGTGGTGGGGGTCAGGTGGACTCTGGGAT...CACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp AAGGGCCTGGACAGACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACAAGGGAGAGGAGTGGTaGAACTATAGGGACTCCCCA +
Preference number: 2 (lower is better)
Translates to: KGLDRQLSEDSGESAPQHKGEEW*NYRDSP
Trigger: TGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTT...GTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTCTGTCCAGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
3UTR-3UTR TCA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTGGACAGACAACTCTCTaGGGATTCAGGGGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPGQTTL*GFRGEC
Trigger: GCACTCTCCCCTGAATCCTCAGAGAGTTGTCTGTCC...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
3UTR-3UTR TCA 90 bp GCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCTGCCTGATGTGCCATaGCACTTGCATTTCCGCTTC +
Preference number: 2 (lower is better)
Translates to: AWGYPSRERSGETIGTPQLPDVP*HLHFRF
Trigger: GAAGCGGAAATGCAAGTGTCATGGCACATCAGGCAG...CTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTAGAGGGAGCCCAGGCTaGAGTAAAGGAGTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPRGSPG*SKGVWG
Trigger: TCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCT...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp CCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGGCGGCTGGTCTTGTTaGAGGCCCGGCCCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: PGRYFKLPGTKSDLGRKSGGWSC*RPGPLS
Trigger: GGACAAGGGGCCGGGCCTGCAACAAGACCAGCCGCC...TGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp TCCTTTGGAGGGTCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGTGCCGGAGCACGTTGTaGCCACGGCCACAGCACAGG +
Preference number: 2 (lower is better)
Translates to: SFGGSPLTSEWKETTSLRCRSTL*PRPQHR
Trigger: CCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCA...CCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCCTCCAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407467.5
3UTR-3UTR CCA 90 bp CAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATCCCGGCCCCTTGTCCCTaGGGAGCCCATAGTGGGGTC +
Preference number: 2 (lower is better)
Translates to: QHSVSFPRKTSLPLSPIIPAPCP*GAHSGV
Trigger: GACCCCACTATGGGCTCCCCAGGGACAAGGGGCCGG...GATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp TCTCTACCACTGTCTCCCATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGATCAGAGCAAAGGGCTaGAAAGGCGCCCCTCTCACA +
Preference number: 2 (lower is better)
Translates to: SLPLSPIIPQEGAQAAVKIRAKG*KGAPLT
Trigger: TGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGAT...CTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAATGGGAGACAGTGGTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp CTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGATCCCAGAGTCCACCTaGCCCCCACCACCCCTAAAG +
Preference number: 2 (lower is better)
Translates to: LPGTKSDLGRKSEQRAEKIPEST*PPPPLK
Trigger: CTTTAGGGGTGGTGGGGGTCAGGTGGACTCTGGGAT...CTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp GACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCAAGGGAGAGGAGTGGTaGAACTATAGGGACTCCCCA +
Preference number: 2 (lower is better)
Translates to: DNSLRIQGRVPLSTLSLSKGEEW*NYRDSP
Trigger: TGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTT...GGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
3UTR-3UTR TCA 90 bp GCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCAGCCAAAAGGAGTATaGATCAGGGTTAAAGGGGCT +
Preference number: 2 (lower is better)
Translates to: AWGYPSRERSGETIGTPQQPKGV*IRVKGA
Trigger: AGCCCCTTTAACCCTGATTCATACTCCTTTTGGCTG...CTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp AGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGCTGCCTGATGTGCCATaGCACTTGCATTTCCGCTTC +
Preference number: 2 (lower is better)
Translates to: RSYGSKQCLGLSLKGEEWLPDVP*HLHFRF
Trigger: GAAGCGGAAATGCAAGTGTCATGGCACATCAGGCAG...CCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp GACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCTATGGCTCCAAACAGTaGCTGGGGTTATCCCTCAAG +
Preference number: 2 (lower is better)
Translates to: DNSLRIQGRVPLSTLSLSYGSKQ*LGLSLK
Trigger: CTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATA...GGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
3UTR-3UTR TCA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATATCAGAGCAAAGGGCTaGAAAGGCGCCCCTCTCACA +
Preference number: 2 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHIRAKG*KGAPLT
Trigger: TGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGAT...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp CCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGGTTGTGGGTATCAATaGAGATGGCCCGGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: PGRYFKLPGTKSDLGRKSGCGYQ*RWPGPA
Trigger: GGCTGGGCCGGGCCATCTTCATTGATACCCACAACC...TGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp GAGCAATACAGTGCATTTCATCTTAGTCCATTCAGGTGTCTAAGGAGCAGAAGAGTAGACCAGCTCTCCTaGGAGGCGACGGGGACGCAG +
Preference number: 2 (lower is better)
Translates to: EQYSAFHLSPFRCLRSRRVDQLS*EATGTQ
Trigger: CTGCGTCCCCGTCGCCTCTCAGGAGAGCTGGTCTAC...TCTTCTGCTCCTTAGACACCTGAATGGACTAAGATGAAATGCACTGTATTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CCA 90 bp AGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGAGACCCTCCAATTGTTaGGGAGAAGGCTACACATCC +
Preference number: 2 (lower is better)
Translates to: RSYGSKQCLGLSLKGEEWRPSNC*GEGYTS
Trigger: GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCT...CCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CCA 90 bp TGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTAAGACCCTCCAATTGTTaGGGAGAAGGCTACACATCC +
Preference number: 2 (lower is better)
Translates to: WLQTVPGVIPQGRGVVKLRPSNC*GEGYTS
Trigger: GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCT...TAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp TCTCTACCACTGTCTCCCATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGCAGCCAAAAGGAGTATaGATCAGGGTTAAAGGGGCT +
Preference number: 2 (lower is better)
Translates to: SLPLSPIIPQEGAQAAVKQPKGV*IRVKGA
Trigger: AGCCCCTTTAACCCTGATTCATACTCCTTTTGGCTG...CTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAATGGGAGACAGTGGTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp GCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGATGTGCCATGACACTTaGATTTCCGCTTCAGGTTTT +
Preference number: 2 (lower is better)
Translates to: AWGYPSRERSGETIGTPQMCHDT*ISASGF
Trigger: AAAACCTGAAGCGGAAATGCAAGTGTCATGGCACAT...CTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp TCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATCGCTCAACTCGTGTCTaGCGGAGCACGTTGTGCCCA +
Preference number: 2 (lower is better)
Translates to: SALCLFPKKNLSTTVSHYRSTRV*RSTLCP
Trigger: TGGGCACAACGTGCTCCGGCAGACACGAGTTGAGCG...ATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CCA 90 bp ATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGCCAGAATTGCGGTTGTaGGTATCAATGAAGATGGCC +
Preference number: 2 (lower is better)
Translates to: ILWLQTVPGVIPQGRGVVPELRL*VSMKMA
Trigger: GGCCATCTTCATTGATACCCACAACCGCAATTCTGG...CACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp GACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCGTACATAGGAGTGGGTaGTCTCTTTCTAGATACAGA +
Preference number: 2 (lower is better)
Translates to: DNSLRIQGRVPLSTLSLSVHRSG*SLSRYR
Trigger: TCTGTATCTAGAAAGAGATCACCCACTCCTATGTAC...GGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
3UTR-3UTR TCA 90 bp CTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTAGGACAGACAACTCTCTaGGGATTCAGGGGAGAGTGC +
Preference number: 2 (lower is better)
Translates to: LSTLSLSQEKPLYHCLPLGQTTL*GFRGEC
Trigger: GCACTCTCCCCTGAATCCTCAGAGAGTTGTCTGTCC...TAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
3UTR-3UTR GCA 90 bp ATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGGAGTTTGGGGATAGTACATATGGCTCCAAACAGTaGCTGGGGTTATCCCTCAAG +
Preference number: 2 (lower is better)
Translates to: IIPQEGAQAAVKEFGDSTYGSKQ*LGLSLK
Trigger: CTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATA...TGTACTATCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR GCA 90 bp ATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGATGTGCCATGACACTTaGATTTCCGCTTCAGGTTTT +
Preference number: 2 (lower is better)
Translates to: ILWLQTVPGVIPQGRGVVMCHDT*ISASGF
Trigger: AAAACCTGAAGCGGAAATGCAAGTGTCATGGCACAT...CACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp CTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATCCAGGGACCAAGAGTaGCCTTGGAAGGAAATCAGA +
Preference number: 2 (lower is better)
Translates to: LSTLSLSQEKPLYHCLPLSRDQE*PWKEIR
Trigger: TCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGA...TAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp TGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACAACTCTCTGAGGATTCAGGTACATAGGAGTGGGTaGTCTCTTTCTAGATACAGA +
Preference number: 2 (lower is better)
Translates to: WKETTSLRAWTDNSLRIQVHRSG*SLSRYR
Trigger: TCTGTATCTAGAAAGAGATCACCCACTCCTATGTAC...CTGAATCCTCAGAGAGTTGTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
3UTR-3UTR CCA 90 bp CAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATCAGACCCTCCAATTGTTaGGGAGAAGGCTACACATCC +
Preference number: 2 (lower is better)
Translates to: QHSVSFPRKTSLPLSPIIRPSNC*GEGYTS
Trigger: GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCT...GATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR TCA 90 bp TTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACAACTCTCAGCCAAAAGGAGTATaGATCAGGGTTAAAGGGGCT +
Preference number: 2 (lower is better)
Translates to: LTSEWKETTSLRAWTDNSQPKGV*IRVKGA
Trigger: AGCCCCTTTAACCCTGATTCATACTCCTTTTGGCTG...AGAGTTGTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
3UTR-3UTR CCA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATCCATTAACATCTGAATaGAAGGAGACAACTTCCCTA +
Preference number: 2 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHPLTSE*KETTSL
Trigger: TAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGG...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
3UTR-3UTR TCA 90 bp TCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATGTACATAGGAGTGGGTaGTCTCTTTCTAGATACAGA +
Preference number: 2 (lower is better)
Translates to: SALCLFPKKNLSTTVSHYVHRSG*SLSRYR
Trigger: TCTGTATCTAGAAAGAGATCACCCACTCCTATGTAC...ATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR GCA 72 bp GCCGGAGCACGTTGTGCCCACGGCCACAGCACAGGCTaGCACAGCCATCCAACAGGCGGCTGGTCTTGTTGC +
Preference number: 3 (lower is better)
Translates to: AGARCAHGHSTG*HSHPTGGWSCC
Trigger: GCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR CCA 72 bp CGCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTTGTaGGTATCAATGAAGATGGCCCGGCCCAGCCGCTCC +
Preference number: 3 (lower is better)
Translates to: RRRGWKAPELRL*VSMKMARPSRS
Trigger: GGAGCGGCTGGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp ACAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCTGGAAGGCTCCAGAATaGCGGTTGTGGGTATCAATG +
Preference number: 3 (lower is better)
Translates to: TGCHSHPTGGWSCCRPGPWKAPE*RLWVSM
Trigger: CATTGATACCCACAACCGCAATTCTGGAGCCTTCCA...GGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTGTCTGCCGGAGCACGTaGTGCCCACGGCCACAGCAC +
Preference number: 3 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPVCRST*CPRPQH
Trigger: GTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGAC...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR CCA 72 bp AGCTCTCCTGAGAGGCGACGGGGACGCAGACGGGGCTaGAAGGCTCCAGAATTGCGGTTGTGGGTATCAATG +
Preference number: 3 (lower is better)
Translates to: SSPERRRGRRRG*KAPELRLWVSM
Trigger: CATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCCCCGTCGCCTCTCAGGAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp GGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAAGGCGGCTGGTCTTGTaGCAGGCCCGGCCCCTTGTC +
Preference number: 3 (lower is better)
Translates to: GYPSRERSGETIGTPQPKRRLVL*QARPLV
Trigger: GACAAGGGGCCGGGCCTGCAACAAGACCAGCCGCCT...TTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp TCTCTACCACTGTCTCCCATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGAACAGGCGGCTGGTCTaGTTGCAGGCCCGGCCCCTT +
Preference number: 3 (lower is better)
Translates to: SLPLSPIIPQEGAQAAVKNRRLV*LQARPL
Trigger: AAGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTT...CTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAATGGGAGACAGTGGTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp ATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAACAGGCGGCTGGTCTaGTTGCAGGCCCGGCCCCTT +
Preference number: 3 (lower is better)
Translates to: ILWLQTVPGVIPQGRGVVNRRLV*LQARPL
Trigger: AAGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTT...CACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp GGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGTCTGCCGGAGCACGTaGTGCCCACGGCCACAGCAC +
Preference number: 3 (lower is better)
Translates to: GYPSRERSGETIGTPQPKVCRST*CPRPQH
Trigger: GTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGAC...TTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR CCA 72 bp ACCCCTTCCTTTGGAGGGTCCCCATTAACATCTGAATaGAAGGAGACAACTTCCCTAAGGGCCTGGACAGAC +
Preference number: 3 (lower is better)
Translates to: TPSFGGSPLTSE*KETTSLRAWTD
Trigger: GTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCCTCCAAAGGAAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
3UTR-3UTR CAA 90 bp GGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAAAAGGGGCTCTGGAGTaGAGAAGTGGGAGGAGCAAT +
Preference number: 3 (lower is better)
Translates to: GYPSRERSGETIGTPQPKKGALE*RSGRSN
Trigger: ATTGCTCCTCCCACTTCTCAACTCCAGAGCCCCTTT...TTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp CTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGCTCAAGACCCTCCAATaGTTGGGGAGAAGGCTACAC +
Preference number: 3 (lower is better)
Translates to: LPGTKSDLGRKSEQRAEKLKTLQ*LGRRLH
Trigger: GTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAG...CTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATAAAGGGGCTCTGGAGTaGAGAAGTGGGAGGAGCAAT +
Preference number: 3 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHKGALE*RSGRSN
Trigger: ATTGCTCCTCCCACTTCTCAACTCCAGAGCCCCTTT...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp CCCCAAGGTAAGGCTGACCCTCACTTACACACATTCACCCACTCTGTAACCTTGTGGAAGGCTCCAGAATaGCGGTTGTGGGTATCAATG +
Preference number: 3 (lower is better)
Translates to: PQGKADPHLHTFTHSVTLWKAPE*RLWVSM
Trigger: CATTGATACCCACAACCGCAATTCTGGAGCCTTCCA...CAAGGTTACAGAGTGGGTGAATGTGTGTAAGTGAGGGTCAGCCTTACCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp CTAGATACAGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGACCCACTCTGTAACCTaGCACTCATCACACAGCACA +
Preference number: 3 (lower is better)
Translates to: LDTDLMAPNSAWGYPSRETHSVT*HSSHST
Trigger: TGTGCTGTGTGATGAGTGCAAGGTTACAGAGTGGGT...CTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCTGTATCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATACCCACTCTGTAACCTaGCACTCATCACACAGCACA +
Preference number: 3 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHTHSVT*HSSHST
Trigger: TGTGCTGTGTGATGAGTGCAAGGTTACAGAGTGGGT...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp ATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGGAGTTTGGGGATAGTACAGCTCCAGAATTGCGGTaGTGGGTATCAATGAAGATG +
Preference number: 3 (lower is better)
Translates to: IIPQEGAQAAVKEFGDSTAPELR*WVSMKM
Trigger: CATCTTCATTGATACCCACAACCGCAATTCTGGAGC...TGTACTATCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR-3UTR CAA 90 bp CCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAAAGACCCTCCAATTGTaGGGGAGAAGGCTACACATC +
Preference number: 3 (lower is better)
Translates to: PGRYFKLPGTKSDLGRKSKTLQL*GRRLHI
Trigger: GATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTT...TGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
3UTR CCA 72 bp TTTCTAGATACAGATCTTATGGCTCCAAACAGTGCCTaGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACT +
Preference number: 3 (lower is better)
Translates to: FLDTDLMAPNSA*GYPSRERSGET
Trigger: AGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCTGTATCTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp AGCACAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCAGGCACAGGCCTAGCTaGCGCTTGCTCAGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: STGCHSHPTGGWSCCRPGRHRPS*RLLRPD
Trigger: GTCCGGCCTGAGCAAGCGGCAGCTAGGCCTGTGCCT...GCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TCAACTCGTGTCTGCCGGAGCACGTTGTGCCCACGGCCACAGCACAGGCTGCCACCGGCCCCTTGTCCCTaGGGAGCCCATAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: STRVCRSTLCPRPQHRLPPAPCP*GAHSGV
Trigger: GACCCCACTATGGGCTCCCCAGGGACAAGGGGCCGG...TGGCAGCCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGACACGAGTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp CAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCTATCCCAGAGTCCACCTaGCCCCCACCACCCCTAAAG +
Preference number: 4 (lower is better)
Translates to: QAATAIQQAAGLVAGPAPIPEST*PPPPLK
Trigger: CTTTAGGGGTGGTGGGGGTCAGGTGGACTCTGGGAT...AGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TCAACTCGTGTCTGCCGGAGCACGTTGTGCCCACGGCCACAGCACAGGCTGCCATCAAGCACACGGTGTTaGCCGTCAGCGGCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: STRVCRSTLCPRPQHRLPSSTRC*PSAAAR
Trigger: GCGAGCCGCCGCTGACGGCCAACACCGTGTGCTTGA...TGGCAGCCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGACACGAGTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp AGCACAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCGGTTGTGGGTATCAATaGAGATGGCCCGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: STGCHSHPTGGWSCCRPGGCGYQ*RWPGPA
Trigger: GGCTGGGCCGGGCCATCTTCATTGATACCCACAACC...GCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp GCTCAACTCGTGTCTGCCGGAGCACGTTGTGCCCACGGCCACAGCACAGGCTGCGTGGGGAGACTGCGCTaGGTTCTGTCCCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: AQLVSAGARCAHGHSTGCVGRLR*VLSPCQ
Trigger: CTGACAAGGGGACAGAACCCAGCGCAGTCTCCCCAC...GCAGCCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGACACGAGTTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403957.5
3UTR CAA 72 bp GGACGCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTaGTGGGTATCAATGAAGATGGCCCGGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRRRGWKAPELR*WVSMKMARPSR
Trigger: GCGGCTGGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
3UTR CAA 72 bp CGACGGGGACGCAGACGGGGCTGGAAGGCTCCAGAATaGCGGTTGTGGGTATCAATGAAGATGGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RRGRRRGWKAPE*RLWVSMKMARP
Trigger: GGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCCCCGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp ACAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCTGCTTAGAGCCCGACTaGACAACGCCAGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: TGCHSHPTGGWSCCRPGPCLEPD*TTPGTG
Trigger: TCCTGTTCCTGGCGTTGTGCAGTCGGGCTCTAAGCA...GGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCAGAATTGCGGTTGTGGGTATCAATGAAGATGGCCCGGCCCAGCCGCTCCCTCGCCGTGGCTACTGCGTaGATGACCCCAGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PELRLWVSMKMARPSRSLAVATA*MTPAAS
Trigger: GCTGGCTGCTGGGGTCATGCACGCAGTAGCCACGGC...GAGGGAGCGGCTGGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTCCTGGGGGCCAGGGCTaGGGCTTGAGCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPPGGQG*GLSQGQ
Trigger: CTGGCCCTGGCTCAAGCCCCAGCCCTGGCCCCCAGG...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR CCA 90 bp AGCACAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCATTCGCATTCGTGCCTaGATGTCCCGGGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: STGCHSHPTGGWSCCRPGIRIRA*MSRGAS
Trigger: GGAAGCTCCCCGGGACATCCAGGCACGAATGCGAAT...GCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp GCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGGCGATGTGCAGACCCTaGAGCGCGGACGCCGTCACG +
Preference number: 4 (lower is better)
Translates to: AWGYPSRERSGETIGTPQAMCRP*SADAVT
Trigger: CGTGACGGCGTCCGCGCTTCAGGGTCTGCACATCGC...CTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp ACGGGGACGCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTTGTGGGTATCAATGTAGACCAGCTCTCCTaGGAGGCGACGGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: TGTQTGLEGSRIAVVGINVDQLS*EATGTQ
Trigger: CTGCGTCCCCGTCGCCTCTCAGGAGAGCTGGTCTAC...ATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp ACAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCGGCCCAGAATCTCATTaGTTAGAGCCCGACTGCACA +
Preference number: 4 (lower is better)
Translates to: TGCHSHPTGGWSCCRPGPGPESH*LEPDCT
Trigger: TGTGCAGTCGGGCTCTAAGCAATGAGATTCTGGGCC...GGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp TGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTACAACGCCGCCCCCACTaGCCGGAACTCTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: WLQTVPGVIPQGRGVVKLQRRPH*PELWGR
Trigger: GCGGCCCCAGAGTTCCGGGCAGTGGGGGCGGCGTTG...TAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTCAACGCCGCCCCCACTaGCCGGAACTCTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: PRVTLEGNQSKGLKRRPSQRRPH*PELWGR
Trigger: GCGGCCCCAGAGTTCCGGGCAGTGGGGGCGGCGTTG...AGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GGACGCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTTGTGGGTATCAATGAAGGGCGGCTGGTCTTGTTaGAGGCCCGGCCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GRRRGWKAPELRLWVSMKGGWSC*RPGPLS
Trigger: GGACAAGGGGCCGGGCCTGCAACAAGACCAGCCGCC...CTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp GTCCCTGGGGAGCCCATAGTGGGGTCTCGCTCACAGAAGTCAGGAGACTTCTCATGGCTACTGCGTGCATaGCCCCAGCAGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: VPGEPIVGSRSQKSGDFSWLLRA*PQQPAW
Trigger: CCATGCTGGCTGCTGGGGTCATGCACGCAGTAGCCA...TGAGAAGTCTCCTGACTTCTGTGAGCGAGACCCCACTATGGGCTCCCCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCCAGGCGGCTGGTCTTGTTaGAGGCCCGGCCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QLSEDSGESAPQHSVSFPGGWSC*RPGPLS
Trigger: GGACAAGGGGCCGGGCCTGCAACAAGACCAGCCGCC...TGGGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp GGGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCGCCCGGAGGCTCCGGTaGGCAGATCGATCAGGACCT +
Preference number: 4 (lower is better)
Translates to: GWQLPLKTLQLLGRRLHIARRLR*ADRSGP
Trigger: AGGTCCTGATCGATCTGCCCACCGGAGCCTCCGGGC...GATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTTCGCGCAGCTGGTGCTaGCACTCGTGGACCGCGATG +
Preference number: 4 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPSRSWC*HSWTAM
Trigger: CATCGCGGTCCACGAGTGTCAGCACCAGCTGCGCGA...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp GCTCAACTCGTGTCTGCCGGAGCACGTTGTGCCCACGGCCACAGCACAGGCTGCTCCAGGGACCAAGAGTaGCCTTGGAAGGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: AQLVSAGARCAHGHSTGCSRDQE*PWKEIR
Trigger: TCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGA...GCAGCCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGACACGAGTTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCTCCAGTGGTTTGGGTaGGGGGTCCGAGACAGGCAC +
Preference number: 4 (lower is better)
Translates to: GGSFPSRPSNCWGEGYTSLQWFG*GVRDRH
Trigger: GTGCCTGTCTCGGACCCCGCACCCAAACCACTGGAG...GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTGGCCTAGCTGCCGCTTaGTCAGGCCGGACAGCGTCA +
Preference number: 4 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPGLAAA*SGRTAS
Trigger: TGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCC...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGGCCTAGCTGCCGCTTaGTCAGGCCGGACAGCGTCA +
Preference number: 4 (lower is better)
Translates to: AASPQDPPIVGEKATHPRGLAAA*SGRTAS
Trigger: TGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCC...TCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCTGCCGGAGCACGTTGTaGCCACGGCCACAGCACAGG +
Preference number: 4 (lower is better)
Translates to: DNSLRIQGRVPLSTLSLSCRSTL*PRPQHR
Trigger: CCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCA...GGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTCGGGGAGCTTCCCACTaGCCTTCCAGCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPRGASH*PSSHSH
Trigger: GTGGCTGTGGCTGGAAGGGCAGTGGGAAGCTCCCCG...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403957.5
CDS-3UTR CCA 90 bp AAGGGCCTGGACAGACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACGCAGCTGCAGCAGTTTaGCCCTCAGCCGATCCTGCT +
Preference number: 4 (lower is better)
Translates to: KGLDRQLSEDSGESAPQHAAAAV*PSADPA
Trigger: AGCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGC...GTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTCTGTCCAGGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp GGACGCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTTGTGGGTATCAATGAAGGGACGCAGACGGGGCTaGAAGGCTCCAGAATTGCGG +
Preference number: 4 (lower is better)
Translates to: GRRRGWKAPELRLWVSMKGRRRG*KAPELR
Trigger: CCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCC...CTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp CCAGAATTGCGGTTGTGGGTATCAATGAAGATGGCCCGGCCCAGCCGCTCCCTCCAGTGGAAGCGGCAATaGCAGCGCTCAACTCGTGTC +
Preference number: 4 (lower is better)
Translates to: PELRLWVSMKMARPSRSLQWKRQ*QRSTRV
Trigger: GACACGAGTTGAGCGCTGCCATTGCCGCTTCCACTG...GAGGGAGCGGCTGGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp TCTCTACCACTGTCTCCCATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGCTCGGAAACCGCGCTTaGGGATGGCGCTGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: SLPLSPIIPQEGAQAAVKLGNRA*GWRCGA
Trigger: CGCACCACAGCGCCATCCTCAAGCGCGGTTTCCGAG...CTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAATGGGAGACAGTGGTAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp GGGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCGGTTGTGGGTATCAATaGAGATGGCCCGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GWQLPLKTLQLLGRRLHIGCGYQ*RWPGPA
Trigger: GGCTGGGCCGGGCCATCTTCATTGATACCCACAACC...GATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp ATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGGTAGACCAGCTCTCCTaGGAGGCGACGGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: ILWLQTVPGVIPQGRGVVVDQLS*EATGTQ
Trigger: CTGCGTCCCCGTCGCCTCTCAGGAGAGCTGGTCTAC...CACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTAGGCACAGGCCTAGCTaGCGCTTGCTCAGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: PRVTLEGNQSKGLKRRPSRHRPS*RLLRPD
Trigger: GTCCGGCCTGAGCAAGCGGCAGCTAGGCCTGTGCCT...AGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTCACACACCGTCACGTCGGGGTTaGGCAGGCACAGGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: VTLEGNQSKGLKRRPSHTPSRRG*AGTGLA
Trigger: AGCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGG...TGTGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTCACACAGCCGTGGCTACTGCGTaGATGACCCCAGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VTLEGNQSKGLKRRPSHTAVATA*MTPAAS
Trigger: GCTGGCTGCTGGGGTCATGCACGCAGTAGCCACGGC...TGTGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTGCAGGCCGTGGCTACTaGGTGCATGACCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRVTLEGNQSKGLKRRPSAGRGY*VHDPSS
Trigger: GCTGCTGGGGTCATGCACGCAGTAGCCACGGCCTGC...AGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTACCAGCTTGCCCAGGCTaGAGGCCGTGGCTACTGCGT +
Preference number: 4 (lower is better)
Translates to: PSRERSGETIGTPQPKGVPACPG*RPWLLR
Trigger: ACGCAGTAGCCACGGCCTGCAGCCTGGGCAAGCTGG...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp TGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTACACAGCTCACCAGCTTaGCCAGGCTGCAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: WLQTVPGVIPQGRGVVKLHSSPA*PGCRPW
Trigger: CCACGGCCTGCAGCCTGGGCAAGCTGGTGAGCTGTG...TAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCGACAGTGCCTGCAGCTaGAGCAGTTTGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGSFPSRPSNCWGEGYTSDSACS*SSLALS
Trigger: GCTGAGGGCCAAACTGCTGCAGCTGCAGGCACTGTC...GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp GCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGGCCACAGCACAGGCTaGCACAGCCATCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: AASPQDPPIVGEKATHPRGHSTG*HSHPTG
Trigger: GCCTGTTGGATGGCTGTGGCAGCCTGTGCTGTGGCC...TCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCGCTCAACTCGTGTCTaGCGGAGCACGTTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GGSFPSRPSNCWGEGYTSRSTRV*RSTLCP
Trigger: TGGGCACAACGTGCTCCGGCAGACACGAGTTGAGCG...GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp ACGGGGACGCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTTGTGGGTATCAATCTTCCCTCGGGACAGTaGCTGCAGCTGCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: TGTQTGLEGSRIAVVGINLPSGQ*LQLQQF
Trigger: AAACTGCTGCAGCTGCAGGCACTGTCCCGAGGGAAG...ATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407467.5
CDS-3UTR CCA 90 bp CCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTTCAAGCACACGGTGTTaGCCGTCAGCGGCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PRVTLEGNQSKGLKRRPSSSTRC*PSAAAR
Trigger: GCGAGCCGCCGCTGACGGCCAACACCGTGTGCTTGA...AGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTTGAGGATGGCGCTGTaGTGCGGCAGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHLRMAL*CGRRPP
Trigger: CGGCGGCCGCCTGCCGCACCACAGCGCCATCCTCAA...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp AGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAATTGAGGATGGCGCTGTaGTGCGGCAGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SFQGPRVTLEGNQSKGLKLRMAL*CGRRPP
Trigger: CGGCGGCCGCCTGCCGCACCACAGCGCCATCCTCAA...TTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp GGACGCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTTGTGGGTATCAATGAAGGCAGCTGCAGCAGTTTaGCCCTCAGCCGATCCTGCT +
Preference number: 4 (lower is better)
Translates to: GRRRGWKAPELRLWVSMKAAAAV*PSADPA
Trigger: AGCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGC...CTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407467.5
CDS-3UTR CCA 90 bp GTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTCACACAAGCCAGGGCCAGGGCTaGGCAGAGAGTGGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: VTLEGNQSKGLKRRPSHTSQGQG*AESGGN
Trigger: GTTTCCCCCACTCTCTGCCCAGCCCTGGCCCTGGCT...TGTGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR CCA 90 bp GACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCCATCCAACAGGCGGCTaGTCTTGTTGCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: DNSLRIQGRVPLSTLSLSHPTGG*SCCRPG
Trigger: GCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATG...GGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR TCA 90 bp GGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCGAGGAAGGGAGGGAGTaGTCGAGAGAGCTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GGSFPSRPSNCWGEGYTSEEGRE*SRELAS
Trigger: GCTTGCTAGCTCTCTCGATCACTCCCTCCCTTCCTC...GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR TCA 90 bp CTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGATGTGCAGACCCTaGAGCGCGGACGCCGTCACG +
Preference number: 4 (lower is better)
Translates to: LPGTKSDLGRKSEQRAEKAMCRP*SADAVT
Trigger: CGTGACGGCGTCCGCGCTTCAGGGTCTGCACATCGC...CTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp TGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACAACTCTCTGAGGATTCAGCTCGGAAACCGCGCTTaGGGATGGCGCTGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: WKETTSLRAWTDNSLRIQLGNRA*GWRCGA
Trigger: CGCACCACAGCGCCATCCTCAAGCGCGGTTTCCGAG...CTGAATCCTCAGAGAGTTGTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR TCA 90 bp CAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCCAATCCCAGAGTCCACCTaGCCCCCACCACCCCTAAAG +
Preference number: 4 (lower is better)
Translates to: QLSEDSGESAPQHSVSFPIPEST*PPPPLK
Trigger: CTTTAGGGGTGGTGGGGGTCAGGTGGACTCTGGGAT...TGGGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp CCCCAAGGTAAGGCTGACCCTCACTTACACACATTCACCCACTCTGTAACCTTGCCGTCACGTCGGGGTTaGGCAGGCACAGGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: PQGKADPHLHTFTHSVTLPSRRG*AGTGLA
Trigger: AGCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGG...CAAGGTTACAGAGTGGGTGAATGTGTGTAAGTGAGGGTCAGCCTTACCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp AGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGGCCCTCAGCCGATCCTaGTCACCACTGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RSYGSKQCLGLSLKGEEWALSRS*SPLPFQ
Trigger: CTGGAAGGGCAGTGGTGAGCAGGATCGGCTGAGGGC...CCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp CTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTACAACGCCGCCCCCACTaGCCGGAACTCTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LSTLSLSQEKPLYHCLPLQRRPH*PELWGR
Trigger: GCGGCCCCAGAGTTCCGGGCAGTGGGGGCGGCGTTG...TAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTAGGCCACAGCACAGGCTaGCACAGCCATCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: PSRERSGETIGTPQPKGVGHSTG*HSHPTG
Trigger: GCCTGTTGGATGGCTGTGGCAGCCTGTGCTGTGGCC...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GGGTCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACATGCCGGAGCACGTTGTaGCCACGGCCACAGCACAGG +
Preference number: 4 (lower is better)
Translates to: GSPLTSEWKETTSLRAWTCRSTL*PRPQHR
Trigger: CCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCA...TGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp AAGGGCCTGGACAGACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACAGAGGGAGCCCAGGCTaGAGTAAAGGAGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KGLDRQLSEDSGESAPQHRGSPG*SKGVWG
Trigger: TCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCT...GTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTCTGTCCAGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp GGACGCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTTGTGGGTATCAATGAAGCGAGACAGGCACGGTTaGGTTGCCTGGGCTTCACTA +
Preference number: 4 (lower is better)
Translates to: GRRRGWKAPELRLWVSMKRDRHG*VAWASL
Trigger: TAGTGAAGCCCAGGCAACCCAACCGTGCCTGTCTCG...CTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403957.5
CDS-3UTR CCA 90 bp GTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTCACACAGGGCTGGGCAGAGAGTaGGGGAAACTCTTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VTLEGNQSKGLKRRPSHTGLGRE*GKLLPR
Trigger: CCGAGGCAAGAGTTTCCCCCACTCTCTGCCCAGCCC...TGTGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR CCA 90 bp GTCCCTGGGGAGCCCATAGTGGGGTCTCGCTCACAGAAGTCAGGAGACTTCTCACCCACCCTGTTGTTGTaGATTCGCATTCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPGEPIVGSRSQKSGDFSPTLLL*IRIRAW
Trigger: CCAGGCACGAATGCGAATCCACAACAACAGGGTGGG...TGAGAAGTCTCCTGACTTCTGTGAGCGAGACCCCACTATGGGCTCCCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TCAACTCGTGTCTGCCGGAGCACGTTGTGCCCACGGCCACAGCACAGGCTGCCACCAGAATTGCGGTTGTaGGTATCAATGAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: STRVCRSTLCPRPQHRLPPELRL*VSMKMA
Trigger: GGCCATCTTCATTGATACCCACAACCGCAATTCTGG...TGGCAGCCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGACACGAGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp ATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGGGACGCAGACGGGGCTaGAAGGCTCCAGAATTGCGG +
Preference number: 4 (lower is better)
Translates to: ILWLQTVPGVIPQGRGVVGRRRG*KAPELR
Trigger: CCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCC...CACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TCTCTACCACTGTCTCCCATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGCATCCAACAGGCGGCTaGTCTTGTTGCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SLPLSPIIPQEGAQAAVKHPTGG*SCCRPG
Trigger: GCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATG...CTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAATGGGAGACAGTGGTAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp GTCCCTGGGGAGCCCATAGTGGGGTCTCGCTCACAGAAGTCAGGAGACTTCTCAGCTCCAAACAGTGCCTaGGGTTATCCCTCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: VPGEPIVGSRSQKSGDFSAPNSA*GYPSRE
Trigger: CTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGC...TGAGAAGTCTCCTGACTTCTGTGAGCGAGACCCCACTATGGGCTCCCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp CTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGTCGCGCAGCTGGTGCTaGCACTCGTGGACCGCGATG +
Preference number: 4 (lower is better)
Translates to: LPGTKSDLGRKSEQRAEKSRSWC*HSWTAM
Trigger: CATCGCGGTCCACGAGTGTCAGCACCAGCTGCGCGA...CTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp CGGGGCTGGAAGGCTCCAGAATTGCGGTTGTGGGTATCAATGAAGATGGCCCGGCTGCCTGATGTGCCATaGCACTTGCATTTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RGWKAPELRLWVSMKMARLPDVP*HLHFRF
Trigger: GAAGCGGAAATGCAAGTGTCATGGCACATCAGGCAG...CCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp CTAGATACAGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGGTAGACCAGCTCTCCTaGGAGGCGACGGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: LDTDLMAPNSAWGYPSREVDQLS*EATGTQ
Trigger: CTGCGTCCCCGTCGCCTCTCAGGAGAGCTGGTCTAC...CTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCTGTATCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp TGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTAATCCCAGAGTCCACCTaGCCCCCACCACCCCTAAAG +
Preference number: 4 (lower is better)
Translates to: WLQTVPGVIPQGRGVVKLIPEST*PPPPLK
Trigger: CTTTAGGGGTGGTGGGGGTCAGGTGGACTCTGGGAT...TAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp ATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGGAGTTTGGGGATAGTACACCGTCACGTCGGGGTTaGGCAGGCACAGGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: IIPQEGAQAAVKEFGDSTPSRRG*AGTGLA
Trigger: AGCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGG...TGTACTATCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp ATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGGAGTTTGGGGATAGTACAGCAGGCCGTGGCTACTaGGTGCATGACCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IIPQEGAQAAVKEFGDSTAGRGY*VHDPSS
Trigger: GCTGCTGGGGTCATGCACGCAGTAGCCACGGCCTGC...TGTACTATCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATCCAGCTTGCCCAGGCTaGAGGCCGTGGCTACTGCGT +
Preference number: 4 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHPACPG*RPWLLR
Trigger: ACGCAGTAGCCACGGCCTGCAGCCTGGGCAAGCTGG...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATCACAGCTCACCAGCTTaGCCAGGCTGCAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHHSSPA*PGCRPW
Trigger: CCACGGCCTGCAGCCTGGGCAAGCTGGTGAGCTGTG...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTAGACAGTGCCTGCAGCTaGAGCAGTTTGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PSRERSGETIGTPQPKGVDSACS*SSLALS
Trigger: GCTGAGGGCCAAACTGCTGCAGCTGCAGGCACTGTC...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp AGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAATGCCGGAGCACGTTGTaGCCACGGCCACAGCACAGG +
Preference number: 4 (lower is better)
Translates to: SFQGPRVTLEGNQSKGLKCRSTL*PRPQHR
Trigger: CCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCA...TTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCAGAATTGCGGTTGTGGGTATCAATGAAGATGGCCCGGCCCAGCCGCTCCCTCTATGGCTCCAAACAGTaGCTGGGGTTATCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: PELRLWVSMKMARPSRSLYGSKQ*LGLSLK
Trigger: CTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATA...GAGGGAGCGGCTGGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp GTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTCACACAGTGGGGAGACTGCGCTaGGTTCTGTCCCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: VTLEGNQSKGLKRRPSHTVGRLR*VLSPCQ
Trigger: CTGACAAGGGGACAGAACCCAGCGCAGTCTCCCCAC...TGTGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR CCA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTGTGCTGCTTAAACCGTaGGGAGACTGCGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPVLLKP*GDCAGF
Trigger: GAACCCAGCGCAGTCTCCCCACGGTTTAAGCAGCAC...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR CCA 90 bp CCCCAAGGTAAGGCTGACCCTCACTTACACACATTCACCCACTCTGTAACCTTGGGACCTCCAGTGGTTTaGGTGCGGGGTCCGAGACAG +
Preference number: 4 (lower is better)
Translates to: PQGKADPHLHTFTHSVTLGPPVV*VRGPRQ
Trigger: CTGTCTCGGACCCCGCACCCAAACCACTGGAGGTCC...CAAGGTTACAGAGTGGGTGAATGTGTGTAAGTGAGGGTCAGCCTTACCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp GTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTCACACAGATCAGGACCTCCAGTaGTTTGGGTGCGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: VTLEGNQSKGLKRRPSHTDQDLQ*FGCGVR
Trigger: TCGGACCCCGCACCCAAACCACTGGAGGTCCTGATC...TGTGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATGCCCGGAGGCTCCGGTaGGCAGATCGATCAGGACCT +
Preference number: 4 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHARRLR*ADRSGP
Trigger: AGGTCCTGATCGATCTGCCCACCGGAGCCTCCGGGC...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp ATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGGAGTTTGGGGATAGTACAGCCCGGAGGCTCCGGTaGGCAGATCGATCAGGACCT +
Preference number: 4 (lower is better)
Translates to: IIPQEGAQAAVKEFGDSTARRLR*ADRSGP
Trigger: AGGTCCTGATCGATCTGCCCACCGGAGCCTCCGGGC...TGTACTATCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp CTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATTGAGGATGGCGCTGTaGTGCGGCAGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LSTLSLSQEKPLYHCLPLLRMAL*CGRRPP
Trigger: CGGCGGCCGCCTGCCGCACCACAGCGCCATCCTCAA...TAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp GGGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCCACCCTGTTGTTGTaGATTCGCATTCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GWQLPLKTLQLLGRRLHIPTLLL*IRIRAW
Trigger: CCAGGCACGAATGCGAATCCACAACAACAGGGTGGG...GATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp ACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCCGGCCCCTTGTCCCTaGGGAGCCCATAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: TLSFQGPRVTLEGNQSKGPAPCP*GAHSGV
Trigger: GACCCCACTATGGGCTCCCCAGGGACAAGGGGCCGG...CCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp ACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGTCGCGCAGCTGGTGCTaGCACTCGTGGACCGCGATG +
Preference number: 4 (lower is better)
Translates to: TLSFQGPRVTLEGNQSKGSRSWC*HSWTAM
Trigger: CATCGCGGTCCACGAGTGTCAGCACCAGCTGCGCGA...CCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp TCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACTGGCTACTGCGTGCATaGCCCCAGCAGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SPLTSEWKETTSLRAWTDWLLRA*PQQPAW
Trigger: CCATGCTGGCTGCTGGGGTCATGCACGCAGTAGCCA...GTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR TCA 90 bp CTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGTGGCTACTGCGTGCATaGCCCCAGCAGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LPGTKSDLGRKSEQRAEKWLLRA*PQQPAW
Trigger: CCATGCTGGCTGCTGGGGTCATGCACGCAGTAGCCA...CTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATCTCCAGTGGTTTGGGTaGGGGGTCCGAGACAGGCAC +
Preference number: 4 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHLQWFG*GVRDRH
Trigger: GTGCCTGTCTCGGACCCCGCACCCAAACCACTGGAG...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGGGCCCAGAATCTCATTaGTTAGAGCCCGACTGCACA +
Preference number: 4 (lower is better)
Translates to: AWGYPSRERSGETIGTPQGPESH*LEPDCT
Trigger: TGTGCAGTCGGGCTCTAAGCAATGAGATTCTGGGCC...CTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp TTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGCAGGCCGTGGCTACTaGGTGCATGACCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FKLPGTKSDLGRKSEQRAAGRGY*VHDPSS
Trigger: GCTGCTGGGGTCATGCACGCAGTAGCCACGGCCTGC...AGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp ACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCACAGCTCACCAGCTTaGCCAGGCTGCAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TLSFQGPRVTLEGNQSKGHSSPA*PGCRPW
Trigger: CCACGGCCTGCAGCCTGGGCAAGCTGGTGAGCTGTG...CCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp ATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGGAGTTTGGGGATAGTACACCTCGGGACAGTGCCTaGAGCTGCAGCAGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: IIPQEGAQAAVKEFGDSTPRDSA*SCSSLA
Trigger: GGCCAAACTGCTGCAGCTGCAGGCACTGTCCCGAGG...TGTACTATCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp AGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGCTTGCCTCGGGACAGTaGCTGCAGCTGCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RSYGSKQCLGLSLKGEEWLASGQ*LQLQQF
Trigger: AAACTGCTGCAGCTGCAGGCACTGTCCCGAGGCAAG...CCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR GCA 90 bp GGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGTGGATTCGCATTCGTaGCTGGATGTCCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GYPSRERSGETIGTPQPKVDSHS*LDVPGS
Trigger: GCTCCCCGGGACATCCAGGCACGAATGCGAATCCAC...TTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CTAGATACAGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGGGCCACAGCACAGGCTaGCACAGCCATCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: LDTDLMAPNSAWGYPSREGHSTG*HSHPTG
Trigger: GCCTGTTGGATGGCTGTGGCAGCCTGTGCTGTGGCC...CTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCTGTATCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAACGCTCAACTCGTGTCTaGCGGAGCACGTTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GYPSRERSGETIGTPQPKRSTRV*RSTLCP
Trigger: TGGGCACAACGTGCTCCGGCAGACACGAGTTGAGCG...TTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp TCTCTACCACTGTCTCCCATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGGGATTCAGGGGAGAGTaGCCCTCAGCACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SLPLSPIIPQEGAQAAVKGFRGE*PSALCL
Trigger: GAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCC...CTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAATGGGAGACAGTGGTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp TCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACGGACCTCCAGTGGTTTaGGTGCGGGGTCCGAGACAG +
Preference number: 4 (lower is better)
Translates to: SPLTSEWKETTSLRAWTDGPPVV*VRGPRQ
Trigger: CTGTCTCGGACCCCGCACCCAAACCACTGGAGGTCC...GTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp TCCTTTGGAGGGTCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGTCAAGCACACGGTGTTaGCCGTCAGCGGCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: SFGGSPLTSEWKETTSLRSSTRC*PSAAAR
Trigger: GCGAGCCGCCGCTGACGGCCAACACCGTGTGCTTGA...CCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCCTCCAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTAATTCGCATTCGTGCCTaGATGTCCCGGGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PSRERSGETIGTPQPKGVIRIRA*MSRGAS
Trigger: GGAAGCTCCCCGGGACATCCAGGCACGAATGCGAAT...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp CAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCCACCCACCCTGTTGTTGTaGATTCGCATTCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QLSEDSGESAPQHSVSFPPTLLL*IRIRAW
Trigger: CCAGGCACGAATGCGAATCCACAACAACAGGGTGGG...TGGGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp CCAGAATTGCGGTTGTGGGTATCAATGAAGATGGCCCGGCCCAGCCGCTCCCTCCCAGAATTGCGGTTGTaGGTATCAATGAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: PELRLWVSMKMARPSRSLPELRL*VSMKMA
Trigger: GGCCATCTTCATTGATACCCACAACCGCAATTCTGG...GAGGGAGCGGCTGGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACCATCCAACAGGCGGCTaGTCTTGTTGCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SPLTSEWKETTSLRAWTDHPTGG*SCCRPG
Trigger: GCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATG...GTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR TCA 90 bp TCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATGCGATGTGCAGACCCTaGAGCGCGGACGCCGTCACG +
Preference number: 4 (lower is better)
Translates to: SALCLFPKKNLSTTVSHYAMCRP*SADAVT
Trigger: CGTGACGGCGTCCGCGCTTCAGGGTCTGCACATCGC...ATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp CTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTACTCGGAAACCGCGCTTaGGGATGGCGCTGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LSTLSLSQEKPLYHCLPLLGNRA*GWRCGA
Trigger: CGCACCACAGCGCCATCCTCAAGCGCGGTTTCCGAG...TAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTAATCAGAGCAAAGGGCTaGAAAGGCGCCCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: PSRERSGETIGTPQPKGVIRAKG*KGAPLT
Trigger: TGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGAT...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp TGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTAGGACAGACAACTCTCTaGGGATTCAGGGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: WLQTVPGVIPQGRGVVKLGQTTL*GFRGEC
Trigger: GCACTCTCCCCTGAATCCTCAGAGAGTTGTCTGTCC...TAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp ACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTCCAGTGGTTTGGGTaGGGGGTCCGAGACAGGCAC +
Preference number: 4 (lower is better)
Translates to: TLSFQGPRVTLEGNQSKGLQWFG*GVRDRH
Trigger: GTGCCTGTCTCGGACCCCGCACCCAAACCACTGGAG...CCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGGCCTAGCTGCCGCTTaGTCAGGCCGGACAGCGTCA +
Preference number: 4 (lower is better)
Translates to: PGRYFKLPGTKSDLGRKSGLAAA*SGRTAS
Trigger: TGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCC...TGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTACCAGCTTGCCCAGGCTaGAGGCCGTGGCTACTGCGT +
Preference number: 4 (lower is better)
Translates to: LSTLSLSQEKPLYHCLPLPACPG*RPWLLR
Trigger: ACGCAGTAGCCACGGCCTGCAGCCTGGGCAAGCTGG...TAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp AGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAGTGGATTCGCATTCGTaGCTGGATGTCCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SFQGPRVTLEGNQSKGLKVDSHS*LDVPGS
Trigger: GCTCCCCGGGACATCCAGGCACGAATGCGAATCCAC...TTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp TCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACCGCTCAACTCGTGTCTaGCGGAGCACGTTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SPLTSEWKETTSLRAWTDRSTRV*RSTLCP
Trigger: TGGGCACAACGTGCTCCGGCAGACACGAGTTGAGCG...GTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp TCTCTACCACTGTCTCCCATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGCACGGTTGGGTTGCCTaGGCTTCACTAGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SLPLSPIIPQEGAQAAVKHGWVA*ASLVLL
Trigger: AAGCAGCACTAGTGAAGCCCAGGCAACCCAACCGTG...CTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAATGGGAGACAGTGGTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR CCA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTACACGGTTGGGTTGCCTaGGCTTCACTAGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PSRERSGETIGTPQPKGVHGWVA*ASLVLL
Trigger: AAGCAGCACTAGTGAAGCCCAGGCAACCCAACCGTG...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR CCA 90 bp GCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGATTTTCAGTTACCACCTaGCGCCCCACCCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: AASPQDPPIVGEKATHPRFSVTT*RPTLLL
Trigger: CAACAACAGGGTGGGGCGCCAGGTGGTAACTGAAAA...TCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp GTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTCACACAGCTCCAAACAGTGCCTaGGGTTATCCCTCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: VTLEGNQSKGLKRRPSHTAPNSA*GYPSRE
Trigger: CTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGC...TGTGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTAGCTCCAAACAGTGCCTaGGGTTATCCCTCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PSRERSGETIGTPQPKGVAPNSA*GYPSRE
Trigger: CTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGC...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TCAACTCGTGTCTGCCGGAGCACGTTGTGCCCACGGCCACAGCACAGGCTGCCACCATTAACATCTGAATaGAAGGAGACAACTTCCCTA +
Preference number: 4 (lower is better)
Translates to: STRVCRSTLCPRPQHRLPPLTSE*KETTSL
Trigger: TAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGG...TGGCAGCCTGTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGACACGAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407467.5
CDS-3UTR TCA 90 bp ATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGCTGCCTGATGTGCCATaGCACTTGCATTTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: ILWLQTVPGVIPQGRGVVLPDVP*HLHFRF
Trigger: GAAGCGGAAATGCAAGTGTCATGGCACATCAGGCAG...CACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp TGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACAACTCTCTGAGGATTCAGATCAGAGCAAAGGGCTaGAAAGGCGCCCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: WKETTSLRAWTDNSLRIQIRAKG*KGAPLT
Trigger: TGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGAT...CTGAATCCTCAGAGAGTTGTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATCAGGCACGGTTGGGTTaGCTGGGCTTCACTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHQARLG*LGFTSA
Trigger: AGCACTAGTGAAGCCCAGGCAACCCAACCGTGCCTG...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR GCA 90 bp TCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATAGGCACAGGCCTAGCTaGCGCTTGCTCAGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: SALCLFPKKNLSTTVSHYRHRPS*RLLRPD
Trigger: GTCCGGCCTGAGCAAGCGGCAGCTAGGCCTGTGCCT...ATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CTAAAGCTGTTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGCCGTGGCTACTGCGTaGATGACCCCAGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LKLFPGRYFKLPGTKSDLAVATA*MTPAAS
Trigger: GCTGGCTGCTGGGGTCATGCACGCAGTAGCCACGGC...AAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAACAGCTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATCCCTCGGGACAGTGCCTaGAGCTGCAGCAGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: QHSVSFPRKTSLPLSPIIPRDSA*SCSSLA
Trigger: GGCCAAACTGCTGCAGCTGCAGGCACTGTCCCGAGG...GATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp TCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACAGTGGGGGAAACTCTTaGCTCGGGACAGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SPLTSEWKETTSLRAWTDSGGNS*LGTVPA
Trigger: TGCAGGCACTGTCCCGAGGCAAGAGTTTCCCCCACT...GTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR GCA 90 bp CAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCCATATGGCTCCAAACAGTaGCTGGGGTTATCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: QLSEDSGESAPQHSVSFPYGSKQ*LGLSLK
Trigger: CTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATA...TGGGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp CTAGATACAGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGGTGCTGCTTAAACCGTaGGGAGACTGCGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LDTDLMAPNSAWGYPSREVLLKP*GDCAGF
Trigger: GAACCCAGCGCAGTCTCCCCACGGTTTAAGCAGCAC...CTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCTGTATCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR CCA 90 bp GAGCAATACAGTGCATTTCATCTTAGTCCATTCAGGTGTCTAAGGAGCAGAAGACCGGCCCCTTGTCCCTaGGGAGCCCATAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: EQYSAFHLSPFRCLRSRRPAPCP*GAHSGV
Trigger: GACCCCACTATGGGCTCCCCAGGGACAAGGGGCCGG...TCTTCTGCTCCTTAGACACCTGAATGGACTAAGATGAAATGCACTGTATTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp AAGGGCCTGGACAGACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACGTACATAGGAGTGGGTaGTCTCTTTCTAGATACAGA +
Preference number: 4 (lower is better)
Translates to: KGLDRQLSEDSGESAPQHVHRSG*SLSRYR
Trigger: TCTGTATCTAGAAAGAGATCACCCACTCCTATGTAC...GTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTCTGTCCAGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp CTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGTGCTTAGAGCCCGACTaGACAACGCCAGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: LPGTKSDLGRKSEQRAEKCLEPD*TTPGTG
Trigger: TCCTGTTCCTGGCGTTGTGCAGTCGGGCTCTAAGCA...CTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp TCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATGCCCTCAGCCGATCCTaGTCACCACTGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SALCLFPKKNLSTTVSHYALSRS*SPLPFQ
Trigger: CTGGAAGGGCAGTGGTGAGCAGGATCGGCTGAGGGC...ATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp ATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGTATGGCTCCAAACAGTaGCTGGGGTTATCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: ILWLQTVPGVIPQGRGVVYGSKQ*LGLSLK
Trigger: CTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATA...CACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TCCTTTGGAGGGTCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGAAGGACTGGGGGCTCTaGCTTTGCTCTCACCGAGCT +
Preference number: 4 (lower is better)
Translates to: SFGGSPLTSEWKETTSLRKDWGL*LCSHRA
Trigger: AGCTCGGTGAGAGCAAAGCCAGAGCCCCCAGTCCTT...CCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCCTCCAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR CCA 90 bp TTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAAGGACCTCCAGTGGTTTaGGTGCGGGGTCCGAGACAG +
Preference number: 4 (lower is better)
Translates to: FPGRYFKLPGTKSDLGRKGPPVV*VRGPRQ
Trigger: CTGTCTCGGACCCCGCACCCAAACCACTGGAGGTCC...TTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TCCTTTGGAGGGTCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGCCCGGGGAGCTTCCCTaGAATCCAAGAAATCCCGAG +
Preference number: 4 (lower is better)
Translates to: SFGGSPLTSEWKETTSLRPGELP*NPRNPE
Trigger: CTCGGGATTTCTTGGATTCCAGGGAAGCTCCCCGGG...CCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCCTCCAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR CCA 90 bp GGGTCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACATTTTCAGTTACCACCTaGCGCCCCACCCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GSPLTSEWKETTSLRAWTFSVTT*RPTLLL
Trigger: CAACAACAGGGTGGGGCGCCAGGTGGTAACTGAAAA...TGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTCCAGAATTGCGGTTGTaGGTATCAATGAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPPELRL*VSMKMA
Trigger: GGCCATCTTCATTGATACCCACAACCGCAATTCTGG...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATGGACGCAGACGGGGCTaGAAGGCTCCAGAATTGCGG +
Preference number: 4 (lower is better)
Translates to: SALCLFPKKNLSTTVSHYGRRRG*KAPELR
Trigger: CCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCC...ATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TCCTTTGGAGGGTCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGCAGTGGAAGCGGCAATaGCAGCGCTCAACTCGTGTC +
Preference number: 4 (lower is better)
Translates to: SFGGSPLTSEWKETTSLRQWKRQ*QRSTRV
Trigger: GACACGAGTTGAGCGCTGCCATTGCCGCTTCCACTG...CCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCCTCCAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp TCTCTACCACTGTCTCCCATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGAGACCCTCCAATTGTTaGGGAGAAGGCTACACATCC +
Preference number: 4 (lower is better)
Translates to: SLPLSPIIPQEGAQAAVKRPSNC*GEGYTS
Trigger: GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCT...CTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAATGGGAGACAGTGGTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp GTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTCACACAAGACCCTCCAATTGTTaGGGAGAAGGCTACACATCC +
Preference number: 4 (lower is better)
Translates to: VTLEGNQSKGLKRRPSHTRPSNC*GEGYTS
Trigger: GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCT...TGTGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp AGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAACTGCCTGATGTGCCATaGCACTTGCATTTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: SFQGPRVTLEGNQSKGLKLPDVP*HLHFRF
Trigger: GAAGCGGAAATGCAAGTGTCATGGCACATCAGGCAG...TTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp TGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTACAGCCAAAAGGAGTATaGATCAGGGTTAAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WLQTVPGVIPQGRGVVKLQPKGV*IRVKGA
Trigger: AGCCCCTTTAACCCTGATTCATACTCCTTTTGGCTG...TAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp ATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGGAGTTTGGGGATAGTACAAAGGGAGAGGAGTGGTaGAACTATAGGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: IIPQEGAQAAVKEFGDSTKGEEW*NYRDSP
Trigger: TGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTT...TGTACTATCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp GGGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCATGTGCCATGACACTTaGATTTCCGCTTCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: GWQLPLKTLQLLGRRLHIMCHDT*ISASGF
Trigger: AAAACCTGAAGCGGAAATGCAAGTGTCATGGCACAT...GATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp ACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGAGAGGGAGCCCAGGCTaGAGTAAAGGAGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TLSFQGPRVTLEGNQSKGRGSPG*SKGVWG
Trigger: TCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCT...CCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATCGGATTCAGGGGAGAGTaGCCCTCAGCACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: QHSVSFPRKTSLPLSPIIGFRGE*PSALCL
Trigger: GAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCC...GATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp TCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATGATCAGGACCTCCAGTaGTTTGGGTGCGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: SALCLFPKKNLSTTVSHYDQDLQ*FGCGVR
Trigger: TCGGACCCCGCACCCAAACCACTGGAGGTCCTGATC...ATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAAGATCAGGACCTCCAGTaGTTTGGGTGCGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: FPGRYFKLPGTKSDLGRKDQDLQ*FGCGVR
Trigger: TCGGACCCCGCACCCAAACCACTGGAGGTCCTGATC...TTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACAACTCTCAGTGGAAGCGGCAATaGCAGCGCTCAACTCGTGTC +
Preference number: 4 (lower is better)
Translates to: LTSEWKETTSLRAWTDNSQWKRQ*QRSTRV
Trigger: GACACGAGTTGAGCGCTGCCATTGCCGCTTCCACTG...AGAGTTGTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp GGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAAGACCCTCCAATTGTTaGGGAGAAGGCTACACATCC +
Preference number: 4 (lower is better)
Translates to: GYPSRERSGETIGTPQPKRPSNC*GEGYTS
Trigger: GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCT...TTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp CTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGACTTCCCTAAGGGCCTaGACAGACAACTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LPGTKSDLGRKSEQRAEKTSLRA*TDNSLR
Trigger: CCTCAGAGAGTTGTCTGTCCAGGCCCTTAGGGAAGT...CTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR TCA 90 bp CTAAAGCTGTTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGAGGAAGGGAGGGAGTaGTCGAGAGAGCTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LKLFPGRYFKLPGTKSDLEEGRE*SRELAS
Trigger: GCTTGCTAGCTCTCTCGATCACTCCCTCCCTTCCTC...AAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAACAGCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR TCA 90 bp CCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAATCAGAGCAAAGGGCTaGAAAGGCGCCCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: PGRYFKLPGTKSDLGRKSIRAKG*KGAPLT
Trigger: TGTGAGAGGGGCGCCTTTTCAGCCCTTTGCTCTGAT...TGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp TTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAACAGGCACGGTTGGGTTaGCTGGGCTTCACTAGTGCT +
Preference number: 4 (lower is better)
Translates to: FPGRYFKLPGTKSDLGRKQARLG*LGFTSA
Trigger: AGCACTAGTGAAGCCCAGGCAACCCAACCGTGCCTG...TTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR GCA 90 bp CTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATGCTTAGAGCCCGACTaGACAACGCCAGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: LSTLSLSQEKPLYHCLPLCLEPD*TTPGTG
Trigger: TCCTGTTCCTGGCGTTGTGCAGTCGGGCTCTAAGCA...TAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp TCCTTTGGAGGGTCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGGCCCAGAATCTCATTaGTTAGAGCCCGACTGCACA +
Preference number: 4 (lower is better)
Translates to: SFGGSPLTSEWKETTSLRGPESH*LEPDCT
Trigger: TGTGCAGTCGGGCTCTAAGCAATGAGATTCTGGGCC...CCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCCTCCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CCA 90 bp TTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAAATTCGCATTCGTGCCTaGATGTCCCGGGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FPGRYFKLPGTKSDLGRKIRIRA*MSRGAS
Trigger: GGAAGCTCCCCGGGACATCCAGGCACGAATGCGAAT...TTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp AGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAACAGCCAAAAGGAGTATaGATCAGGGTTAAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SFQGPRVTLEGNQSKGLKQPKGV*IRVKGA
Trigger: AGCCCCTTTAACCCTGATTCATACTCCTTTTGGCTG...TTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp CTAAAGCTGTTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGACAGACAACTCTCTaGGGATTCAGGGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: LKLFPGRYFKLPGTKSDLGQTTL*GFRGEC
Trigger: GCACTCTCCCCTGAATCCTCAGAGAGTTGTCTGTCC...AAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAACAGCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR GCA 90 bp AGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGATGTGCCATGACACTTaGATTTCCGCTTCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RSYGSKQCLGLSLKGEEWMCHDT*ISASGF
Trigger: AAAACCTGAAGCGGAAATGCAAGTGTCATGGCACAT...CCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CTAAAGCTGTTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTAGAGGGAGCCCAGGCTaGAGTAAAGGAGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LKLFPGRYFKLPGTKSDLRGSPG*SKGVWG
Trigger: TCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCT...AAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAACAGCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp GAGCAATACAGTGCATTTCATCTTAGTCCATTCAGGTGTCTAAGGAGCAGAAGACGAGACAGGCACGGTTaGGTTGCCTGGGCTTCACTA +
Preference number: 4 (lower is better)
Translates to: EQYSAFHLSPFRCLRSRRRDRHG*VAWASL
Trigger: TAGTGAAGCCCAGGCAACCCAACCGTGCCTGTCTCG...TCTTCTGCTCCTTAGACACCTGAATGGACTAAGATGAAATGCACTGTATTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR CCA 90 bp CAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCCACCATTAACATCTGAATaGAAGGAGACAACTTCCCTA +
Preference number: 4 (lower is better)
Translates to: QLSEDSGESAPQHSVSFPPLTSE*KETTSL
Trigger: TAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGG...TGGGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR TCA 90 bp TTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACAACTCTTCCAGGGACCAAGAGTaGCCTTGGAAGGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: LTSEWKETTSLRAWTDNSSRDQE*PWKEIR
Trigger: TCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGA...AGAGTTGTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR TCA 90 bp TTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAAAAGGGAGAGGAGTGGTaGAACTATAGGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: FPGRYFKLPGTKSDLGRKKGEEW*NYRDSP
Trigger: TGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTT...TTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp CTAAAGCTGTTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTTTTTCAGTTACCACCTaGCGCCCCACCCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LKLFPGRYFKLPGTKSDLFSVTT*RPTLLL
Trigger: CAACAACAGGGTGGGGCGCCAGGTGGTAACTGAAAA...AAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAACAGCTTTAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CCA 90 bp TTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAAACTTCCCTAAGGGCCTaGACAGACAACTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: FPGRYFKLPGTKSDLGRKTSLRA*TDNSLR
Trigger: CCTCAGAGAGTTGTCTGTCCAGGCCCTTAGGGAAGT...TTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR TCA 90 bp CTAAAGCTGTTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTTCCAGGGACCAAGAGTaGCCTTGGAAGGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: LKLFPGRYFKLPGTKSDLSRDQE*PWKEIR
Trigger: TCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGA...AAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAACAGCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp CTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGTACATAGGAGTGGGTaGTCTCTTTCTAGATACAGA +
Preference number: 4 (lower is better)
Translates to: LPGTKSDLGRKSEQRAEKVHRSG*SLSRYR
Trigger: TCTGTATCTAGAAAGAGATCACCCACTCCTATGTAC...CTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR GCA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATATGTGCCATGACACTTaGATTTCCGCTTCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHMCHDT*ISASGF
Trigger: AAAACCTGAAGCGGAAATGCAAGTGTCATGGCACAT...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR TCA 90 bp ACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGGTACATAGGAGTGGGTaGTCTCTTTCTAGATACAGA +
Preference number: 4 (lower is better)
Translates to: TLSFQGPRVTLEGNQSKGVHRSG*SLSRYR
Trigger: TCTGTATCTAGAAAGAGATCACCCACTCCTATGTAC...CCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS GCA 90 bp CCGCGATGTGCAGACCCTGAAGCGCGGACGCCGTCACGTCGGGGTTaGGCAGGCACAGGCCTAGCTGCCGCTTGCTCAGGCCGGACAGCG +
Preference number: 5 (lower is better)
Translates to: PRCADPEARTPSRRG*AGTGLAAACSGRTA
Trigger: CGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGGCGTCCGCGCTTCAGGGTCTGCACATCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS GCA 90 bp AGCGCGGACGCCGTCACGTCGGGGTTGCGCAGGCACAGGCCTAGCTaGCGCTTGCTCAGGCCGGACAGCGTCAAGCACACGGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SADAVTSGLRRHRPS*RLLRPDSVKHTVLA
Trigger: GGCCAACACCGTGTGCTTGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGGCGTCCGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS-3UTR CAA 90 bp CAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCTGCCGTCACGTCGGGGTaGCGCAGGCACAGGCCTAGC +
Preference number: 5 (lower is better)
Translates to: QAATAIQQAAGLVAGPAPAVTSG*RRHRPS
Trigger: GCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGGC...AGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS GCA 90 bp ACGCCGTCACGTCGGGGTTGCGCAGGCACAGGCCTAGCTGCCGCTTaGTCAGGCCGGACAGCGTCAAGCACACGGTGTTGGCCGTCAGCG +
Preference number: 5 (lower is better)
Translates to: TPSRRGCAGTGLAAA*SGRTASSTRCWPSA
Trigger: CGCTGACGGCCAACACCGTGTGCTTGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS-3UTR CAA 90 bp ACAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCAGGCCTAGCTGCCGCTaGCTCAGGCCGGACAGCGTC +
Preference number: 5 (lower is better)
Translates to: TGCHSHPTGGWSCCRPGPRPSCR*LRPDSV
Trigger: GACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCCT...GGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCTAGGCGGCTGGTCTTGTaGCAGGCCCGGCCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: QAATAIQQAAGLVAGPAPRRLVL*QARPLV
Trigger: GACAAGGGGCCGGGCCTGCAACAAGACCAGCCGCCT...AGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp AGCACAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCGTCAAGCACACGGTGTaGGCCGTCAGCGGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: STGCHSHPTGGWSCCRPGVKHTV*AVSGGS
Trigger: CGAGCCGCCGCTGACGGCCAACACCGTGTGCTTGAC...GCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCTAACAGGCGGCTGGTCTaGTTGCAGGCCCGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: QAATAIQQAAGLVAGPAPNRRLV*LQARPL
Trigger: AAGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTT...AGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp ACAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCCCGAGACAGGCACGGTaGGGTTGCCTGGGCTTCACT +
Preference number: 5 (lower is better)
Translates to: TGCHSHPTGGWSCCRPGPPRQAR*GCLGFT
Trigger: AGTGAAGCCCAGGCAACCCAACCGTGCCTGTCTCGG...GGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000403957.5
CDS GCA 90 bp GCCAGGGCTGGGCAGAGAGTGGGGGAAACTCTTGCCTCGGGACAGTaGCTGCAGCTGCAGCAGTTTGGCCCTCAGCCGATCCTGCTCACC +
Preference number: 5 (lower is better)
Translates to: ARAGQRVGETLASGQ*LQLQQFGPQPILLT
Trigger: GGTGAGCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGCAGGCACTGTCCCGAGGCAAGAGTTTCCCCCACTCTCTGCCCAGCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS CCA 90 bp CTAGCTGCCGCTTGCTCAGGCCGGACAGCGTCAAGCACACGGTGTTaGCCGTCAGCGGCGGCTCGCCAGGCAACTTCAGGCCCAGAATCT +
Preference number: 5 (lower is better)
Translates to: LAAACSGRTASSTRC*PSAAARQATSGPES
Trigger: AGATTCTGGGCCTGAAGTTGCCTGGCGAGCCGCCGCTGACGGCCAACACCGTGTGCTTGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS GCA 90 bp GGGCTGGGCAGAGAGTGGGGGAAACTCTTGCCTCGGGACAGTGCCTaGAGCTGCAGCAGTTTGGCCCTCAGCCGATCCTGCTCACCACTG +
Preference number: 5 (lower is better)
Translates to: GLGREWGKLLPRDSA*SCSSLALSRSCSPL
Trigger: CAGTGGTGAGCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGCAGGCACTGTCCCGAGGCAAGAGTTTCCCCCACTCTCTGCCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS TCA 90 bp AGGCTCCGGTGGGCAGATCGATCAGGACCTGCGGGACGGGAGACTTaGTGCGGGTTCAGGAATAGGGCGGCTCGCTTGGGGAACCAAGTG +
Preference number: 5 (lower is better)
Translates to: RLRWADRSGPAGRET*CGFRNRAARLGNQV
Trigger: CACTTGGTTCCCCAAGCGAGCCGCCCTATTCCTGAACCCGCATCAAGTCTCCCGTCCCGCAGGTCCTGATCGATCTGCCCACCGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413630.1
ENST00000475740.1
CDS GCA 90 bp GGCAGAGAGTGGGGGAAACTCTTGCCTCGGGACAGTGCCTGCAGCTaGAGCAGTTTGGCCCTCAGCCGATCCTGCTCACCACTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GREWGKLLPRDSACS*SSLALSRSCSPLPF
Trigger: GAAGGGCAGTGGTGAGCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGCAGGCACTGTCCCGAGGCAAGAGTTTCCCCCACTCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS GCA 90 bp AGTTACCACCTGGCGCCCCACCCTGTTGTTGTGGATTCGCATTCGTaGCTGGATGTCCCGGGGAGCTTCCCTCGGGACAGTGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SYHLAPHPVVVDSHS*LDVPGSFPRDSACS
Trigger: GCTGCAGGCACTGTCCCGAGGGAAGCTCCCCGGGACATCCAGGCACGAATGCGAATCCACAACAACAGGGTGGGGCGCCAGGTGGTAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407467.5
CDS CCA 90 bp CAGTGGTTTGGGTGCGGGGTCCGAGACAGGCACGGTTGGGTTGCCTaGGCTTCACTAGTGCTGCTTAAACCGTGGGGAGACTGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: QWFGCGVRDRHGWVA*ASLVLLKPWGDCAG
Trigger: CCCAGCGCAGTCTCCCCACGGTTTAAGCAGCACTAGTGAAGCCCAGGCAACCCAACCGTGCCTGTCTCGGACCCCGCACCCAAACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR CAA 90 bp ACAGGCTGCCACAGCCATCCAACAGGCGGCTGGTCTTGTTGCAGGCCCGGCCCCAGGCCCAGAATCTCATaGCTTAGAGCCCGACTGCAC +
Preference number: 5 (lower is better)
Translates to: TGCHSHPTGGWSCCRPGPRPRIS*LRARLH
Trigger: GTGCAGTCGGGCTCTAAGCAATGAGATTCTGGGCCT...GGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGGATGGCTGTGGCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS GCA 90 bp AGTTACCACCTGGCGCCCCACCCTGTTGTTGTGGATTCGCATTCGTaGCTGGATGTCCCGGGGAGCTTCCCACTGCCCTTCCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: SYHLAPHPVVVDSHS*LDVPGSFPLPFQPQ
Trigger: CTGTGGCTGGAAGGGCAGTGGGAAGCTCCCCGGGACATCCAGGCACGAATGCGAATCCACAACAACAGGGTGGGGCGCCAGGTGGTAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403957.5
CDS CCA 90 bp CAGGACCTCCAGTGGTTTGGGTGCGGGGTCCGAGACAGGCACGGTTaGGTTGCCTGGGCTTCACTAGTGCTGCTTAAACCGTGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: QDLQWFGCGVRDRHG*VAWASLVLLKPWGD
Trigger: GTCTCCCCACGGTTTAAGCAGCACTAGTGAAGCCCAGGCAACCCAACCGTGCCTGTCTCGGACCCCGCACCCAAACCACTGGAGGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR CAA 90 bp GCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGGTCAAGCACACGGTGTaGGCCGTCAGCGGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: AWGYPSRERSGETIGTPQVKHTV*AVSGGS
Trigger: CGAGCCGCCGCTGACGGCCAACACCGTGTGCTTGAC...CTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp GGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCGTCTGCCGGAGCACGTaGTGCCCACGGCCACAGCAC +
Preference number: 5 (lower is better)
Translates to: GGSFPSRPSNCWGEGYTSVCRST*CPRPQH
Trigger: GTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGAC...GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTAGCCGTCACGTCGGGGTaGCGCAGGCACAGGCCTAGC +
Preference number: 5 (lower is better)
Translates to: PSRERSGETIGTPQPKGVAVTSG*RRHRPS
Trigger: GCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGGC...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp ATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGGCCGTCACGTCGGGGTaGCGCAGGCACAGGCCTAGC +
Preference number: 5 (lower is better)
Translates to: ILWLQTVPGVIPQGRGVVAVTSG*RRHRPS
Trigger: GCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGGC...CACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS GCA 90 bp TGGGTTGCCTGGGCTTCACTAGTGCTGCTTAAACCGTGGGGAGACTaGGCTGGGTTCTGTCCCCTTGTCAGAGCCGCATTCTTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: WVAWASLVLLKPWGD*AGFCPLVRAAFFQG
Trigger: GCCCTGGAAGAATGCGGCTCTGACAAGGGGACAGAACCCAGCGCAGTCTCCCCACGGTTTAAGCAGCACTAGTGAAGCCCAGGCAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS CCA 90 bp AGGCACGGTTGGGTTGCCTGGGCTTCACTAGTGCTGCTTAAACCGTaGGGAGACTGCGCTGGGTTCTGTCCCCTTGTCAGAGCCGCATTC +
Preference number: 5 (lower is better)
Translates to: RHGWVAWASLVLLKP*GDCAGFCPLVRAAF
Trigger: GAATGCGGCTCTGACAAGGGGACAGAACCCAGCGCAGTCTCCCCACGGTTTAAGCAGCACTAGTGAAGCCCAGGCAACCCAACCGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS CCA 90 bp ACCACCTGGCGCCCCACCCTGTTGTTGTGGATTCGCATTCGTGCCTaGATGTCCCGGGGAGCTTCCCTGGAATCCAAGAAATCCCGAGAG +
Preference number: 5 (lower is better)
Translates to: TTWRPTLLLWIRIRA*MSRGASLESKKSRE
Trigger: CTCTCGGGATTTCTTGGATTCCAGGGAAGCTCCCCGGGACATCCAGGCACGAATGCGAATCCACAACAACAGGGTGGGGCGCCAGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR CAA 90 bp GGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCCGAGACAGGCACGGTaGGGTTGCCTGGGCTTCACT +
Preference number: 5 (lower is better)
Translates to: GGSFPSRPSNCWGEGYTSPRQAR*GCLGFT
Trigger: AGTGAAGCCCAGGCAACCCAACCGTGCCTGTCTCGG...GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS-3UTR CAA 90 bp GGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCAGGACCTCCAGTGGTTaGGGTGCGGGGTCCGAGACA +
Preference number: 5 (lower is better)
Translates to: GGSFPSRPSNCWGEGYTSRTSSG*GAGSET
Trigger: TGTCTCGGACCCCGCACCCAAACCACTGGAGGTCCT...GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTAAGGCCTAGCTGCCGCTaGCTCAGGCCGGACAGCGTC +
Preference number: 5 (lower is better)
Translates to: PSRERSGETIGTPQPKGVRPSCR*LRPDSV
Trigger: GACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCCT...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp TCTCTACCACTGTCTCCCATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGAGGCGGCTGGTCTTGTaGCAGGCCCGGCCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: SLPLSPIIPQEGAQAAVKRRLVL*QARPLV
Trigger: GACAAGGGGCCGGGCCTGCAACAAGACCAGCCGCCT...CTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAATGGGAGACAGTGGTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp ATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGGTCTGCCGGAGCACGTaGTGCCCACGGCCACAGCAC +
Preference number: 5 (lower is better)
Translates to: ILWLQTVPGVIPQGRGVVVCRST*CPRPQH
Trigger: GTGCTGTGGCCGTGGGCACAACGTGCTCCGGCAGAC...CACCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS GCA 90 bp AGTTACCACCTGGCGCCCCACCCTGTTGTTGTGGATTCGCATTCGTaGCTGGATGTCCCGGGGAGCTTCCCTGGAATCCAAGAAATCCCG +
Preference number: 5 (lower is better)
Translates to: SYHLAPHPVVVDSHS*LDVPGSFPGIQEIP
Trigger: CGGGATTTCTTGGATTCCAGGGAAGCTCCCCGGGACATCCAGGCACGAATGCGAATCCACAACAACAGGGTGGGGCGCCAGGTGGTAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS GCA 90 bp AGGCGTTGTCCCAGCTCAGGACTCAAGCGAGCACCCCTGGAACCTTaGCCAATCAGACACAACGCCCGGCACACAGACACACACTCACTT +
Preference number: 5 (lower is better)
Translates to: RRCPSSGLKRAPLEP*PIRHNARHTDTHSL
Trigger: AAGTGAGTGTGTGTCTGTGTGCCGGGCGTTGTGTCTGATTGGGCAAGGTTCCAGGGGTGCTCGCTTGAGTCCTGAGCTGGGACAACGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420388.1
CDS CCA 90 bp AAGAGTCAAGGCGTTGTCCCAGCTCAGGACTCAAGCGAGCACCCCTaGAACCTTGCCCAATCAGACACAACGCCCGGCACACAGACACAC +
Preference number: 5 (lower is better)
Translates to: KSQGVVPAQDSSEHP*NLAQSDTTPGTQTH
Trigger: GTGTGTCTGTGTGCCGGGCGTTGTGTCTGATTGGGCAAGGTTCCAGGGGTGCTCGCTTGAGTCCTGAGCTGGGACAACGCCTTGACTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420388.1
CDS-3UTR CAA 90 bp GCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAAGGACCTCCAGTGGTTaGGGTGCGGGGTCCGAGACA +
Preference number: 5 (lower is better)
Translates to: AASPQDPPIVGEKATHPRRTSSG*GAGSET
Trigger: TGTCTCGGACCCCGCACCCAAACCACTGGAGGTCCT...TCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp GACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCGAGTGGGGGAAACTCTaGCCTCGGGACAGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: DNSLRIQGRVPLSTLSLSEWGKL*PRDSAC
Trigger: GCAGGCACTGTCCCGAGGCAAGAGTTTCCCCCACTC...GGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR CAA 90 bp TCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACGTCAAGCACACGGTGTaGGCCGTCAGCGGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: SPLTSEWKETTSLRAWTDVKHTV*AVSGGS
Trigger: CGAGCCGCCGCTGACGGCCAACACCGTGTGCTTGAC...GTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CAA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTATGCAGCTGCAGCAGTTaGGCCCTCAGCCGATCCTGC +
Preference number: 5 (lower is better)
Translates to: PSRERSGETIGTPQPKGVCSCSS*ALSRSC
Trigger: GCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGCA...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CAA 90 bp GACAACTCTCTGAGGATTCAGGGGAGAGTGCCCCTCAGCACTCTGTCTCTTTCCCGCCCCACCCTGTTGTaGTGGATTCGCATTCGTGCC +
Preference number: 5 (lower is better)
Translates to: DNSLRIQGRVPLSTLSLSRPTLL*WIRIRA
Trigger: GGCACGAATGCGAATCCACAACAACAGGGTGGGGCG...GGAAAGAGACAGAGTGCTGAGGGGCACTCTCCCCTGAATCCTCAGAGAGTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CAA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTCGCCCCACCCTGTTGTaGTGGATTCGCATTCGTGCC +
Preference number: 5 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPRPTLL*WIRIRA
Trigger: GGCACGAATGCGAATCCACAACAACAGGGTGGGGCG...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CTAGATACAGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGCGGCTGGTCTTGTaGCAGGCCCGGCCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: LDTDLMAPNSAWGYPSRERRLVL*QARPLV
Trigger: GACAAGGGGCCGGGCCTGCAACAAGACCAGCCGCCT...CTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCTGTATCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CCAGAATTGCGGTTGTGGGTATCAATGAAGATGGCCCGGCCCAGCCGCTCCCTCAAAGGGGCTCTGGAGTaGAGAAGTGGGAGGAGCAAT +
Preference number: 5 (lower is better)
Translates to: PELRLWVSMKMARPSRSLKGALE*RSGRSN
Trigger: ATTGCTCCTCCCACTTCTCAACTCCAGAGCCCCTTT...GAGGGAGCGGCTGGGCCGGGCCATCTTCATTGATACCCACAACCGCAATTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp GGGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCAGGCCCAGAATCTCATaGCTTAGAGCCCGACTGCAC +
Preference number: 5 (lower is better)
Translates to: GWQLPLKTLQLLGRRLHIRPRIS*LRARLH
Trigger: GTGCAGTCGGGCTCTAAGCAATGAGATTCTGGGCCT...GATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp TCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACAACAGGCGGCTGGTCTaGTTGCAGGCCCGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: SPLTSEWKETTSLRAWTDNRRLV*LQARPL
Trigger: AAGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTT...GTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CAA 90 bp ACGGGGACGCAGACGGGGCTGGAAGGCTCCAGAATTGCGGTTGTGGGTATCAATCTCAAGACCCTCCAATaGTTGGGGAGAAGGCTACAC +
Preference number: 5 (lower is better)
Translates to: TGTQTGLEGSRIAVVGINLKTLQ*LGRRLH
Trigger: GTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAG...ATTGATACCCACAACCGCAATTCTGGAGCCTTCCAGCCCCGTCTGCGTCCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAAGGCCTAGCTGCCGCTaGCTCAGGCCGGACAGCGTC +
Preference number: 5 (lower is better)
Translates to: PGRYFKLPGTKSDLGRKSRPSCR*LRPDSV
Trigger: GACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCCT...TGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp ATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGGAGTTTGGGGATAGTACATCTCGGAAACCGCGCTaGAGGATGGCGCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: IIPQEGAQAAVKEFGDSTSRKPR*RMALWC
Trigger: GCACCACAGCGCCATCCTCAAGCGCGGTTTCCGAGA...TGTACTATCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp TCTCTACCACTGTCTCCCATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGTGGCGCCCCACCCTGTaGTTGTGGATTCGCATTCGT +
Preference number: 5 (lower is better)
Translates to: SLPLSPIIPQEGAQAAVKWRPTL*LWIRIR
Trigger: ACGAATGCGAATCCACAACAACAGGGTGGGGCGCCA...CTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAATGGGAGACAGTGGTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp TTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTAACAGGCGGCTGGTCTaGTTGCAGGCCCGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: FKLPGTKSDLGRKSEQRANRRLV*LQARPL
Trigger: AAGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTT...AGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp GGTGGCAGCTTCCCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCAAAGGGGCTCTGGAGTaGAGAAGTGGGAGGAGCAAT +
Preference number: 5 (lower is better)
Translates to: GGSFPSRPSNCWGEGYTSKGALE*RSGRSN
Trigger: ATTGCTCCTCCCACTTCTCAACTCCAGAGCCCCTTT...GGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGGGAAGCTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS GCA 90 bp TTGGGGAACCAAGTGACGCCCTTCTTCGGGCTCCTAACCCACCGGTaGCACCCTACTGACCCTTCTCATTCCTCCTCAAACAAAACAAGA +
Preference number: 5 (lower is better)
Translates to: LGNQVTPFFGLLTHR*HPTDPSHSSSNKTR
Trigger: TCTTGTTTTGTTTGAGGAGGAATGAGAAGGGTCAGTAGGGTGGCACCGGTGGGTTAGGAGCCCGAAGAAGGGCGTCACTTGGTTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413630.1
CDS-3UTR CAA 90 bp CCCCAAGGTAAGGCTGACCCTCACTTACACACATTCACCCACTCTGTAACCTTGCTGGGTTCTGTCCCCTaGTCAGAGCCGCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: PQGKADPHLHTFTHSVTLLGSVP*SEPHSS
Trigger: GGAAGAATGCGGCTCTGACAAGGGGACAGAACCCAG...CAAGGTTACAGAGTGGGTGAATGTGTGTAAGTGAGGGTCAGCCTTACCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403957.5
CDS-3UTR CAA 90 bp TCCTTTGGAGGGTCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGAGGACCTCCAGTGGTTaGGGTGCGGGGTCCGAGACA +
Preference number: 5 (lower is better)
Translates to: SFGGSPLTSEWKETTSLRRTSSG*GAGSET
Trigger: TGTCTCGGACCCCGCACCCAAACCACTGGAGGTCCT...CCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCCTCCAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CAA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTAAGGCCCAGAATCTCATaGCTTAGAGCCCGACTGCAC +
Preference number: 5 (lower is better)
Translates to: PSRERSGETIGTPQPKGVRPRIS*LRARLH
Trigger: GTGCAGTCGGGCTCTAAGCAATGAGATTCTGGGCCT...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp ACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGTCTCGGAAACCGCGCTaGAGGATGGCGCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: TLSFQGPRVTLEGNQSKGSRKPR*RMALWC
Trigger: GCACCACAGCGCCATCCTCAAGCGCGGTTTCCGAGA...CCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CTTCCAGGGACCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGCGCCCCACCCTGTTGTaGTGGATTCGCATTCGTGCC +
Preference number: 5 (lower is better)
Translates to: LPGTKSDLGRKSEQRAEKRPTLL*WIRIRA
Trigger: GGCACGAATGCGAATCCACAACAACAGGGTGGGGCG...CTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp GGTTATCCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAATGGCGCCCCACCCTGTaGTTGTGGATTCGCATTCGT +
Preference number: 5 (lower is better)
Translates to: GYPSRERSGETIGTPQPKWRPTL*LWIRIR
Trigger: ACGAATGCGAATCCACAACAACAGGGTGGGGCGCCA...TTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGGATAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTAAAGGGGCTCTGGAGTaGAGAAGTGGGAGGAGCAAT +
Preference number: 5 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPKGALE*RSGRSN
Trigger: ATTGCTCCTCCCACTTCTCAACTCCAGAGCCCCTTT...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CCCTCAAGACCCTCCAATTGTTGGGGAGAAGGCTACACATCCCAGAGTCCACCTTGGAAGGCTCCAGAATaGCGGTTGTGGGTATCAATG +
Preference number: 5 (lower is better)
Translates to: PSRPSNCWGEGYTSQSPPWKAPE*RLWVSM
Trigger: CATTGATACCCACAACCGCAATTCTGGAGCCTTCCA...AGGTGGACTCTGGGATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CCAAGAGTGACCTTGGAAGGAAATCAGAGCAAAGGGCTGAAAAGGCGCCCCTCTCTCAAGACCCTCCAATaGTTGGGGAGAAGGCTACAC +
Preference number: 5 (lower is better)
Translates to: PRVTLEGNQSKGLKRRPSLKTLQ*LGRRLH
Trigger: GTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAG...AGAGGGGCGCCTTTTCAGCCCTTTGCTCTGATTTCCTTCCAAGGTCACTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS CCA 90 bp TGTTGTGGATTCGCATTCGTGCCTGGATGTCCCGGGGAGCTTCCCTaGAATCCAAGAAATCCCGAGAGAACTTCTCTCCAAAGTCCATGT +
Preference number: 5 (lower is better)
Translates to: CCGFAFVPGCPGELP*NPRNPERTSLQSPC
Trigger: ACATGGACTTTGGAGAGAAGTTCTCTCGGGATTTCTTGGATTCCAGGGAAGCTCCCCGGGACATCCAGGCACGAATGCGAATCCACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR CAA 90 bp GAGCAATACAGTGCATTTCATCTTAGTCCATTCAGGTGTCTAAGGAGCAGAAGACTGGGGGCTCTGGCTTaGCTCTCACCGAGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: EQYSAFHLSPFRCLRSRRLGALA*LSPSSG
Trigger: CCCTGAGCTCGGTGAGAGCAAAGCCAGAGCCCCCAG...TCTTCTGCTCCTTAGACACCTGAATGGACTAAGATGAAATGCACTGTATTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR CAA 90 bp TCCTTTGGAGGGTCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGCTGGGTTCTGTCCCCTaGTCAGAGCCGCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: SFGGSPLTSEWKETTSLRLGSVP*SEPHSS
Trigger: GGAAGAATGCGGCTCTGACAAGGGGACAGAACCCAG...CCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCCTCCAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS-3UTR CAA 90 bp TCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATTGCAGCTGCAGCAGTTaGGCCCTCAGCCGATCCTGC +
Preference number: 5 (lower is better)
Translates to: SALCLFPKKNLSTTVSHYCSCSS*ALSRSC
Trigger: GCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGCA...ATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CAA 90 bp AGATCTTATGGCTCCAAACAGTGCCTGGGGTTATCCCTCAAGGGAGAGGAGTGGTGGAAGGCTCCAGAATaGCGGTTGTGGGTATCAATG +
Preference number: 5 (lower is better)
Translates to: RSYGSKQCLGLSLKGEEWWKAPE*RLWVSM
Trigger: CATTGATACCCACAACCGCAATTCTGGAGCCTTCCA...CCACTCCTCTCCCTTGAGGGATAACCCCAGGCACTGTTTGGAGCCATAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp CCCTCAAGGGAGAGGAGTGGTGAAACTATAGGGACTCCCCAGCCAAAAGGAGTAACCCACTCTGTAACCTaGCACTCATCACACAGCACA +
Preference number: 5 (lower is better)
Translates to: PSRERSGETIGTPQPKGVTHSVT*HSSHST
Trigger: TGTGCTGTGTGATGAGTGCAAGGTTACAGAGTGGGT...TACTCCTTTTGGCTGGGGAGTCCCTATAGTTTCACCACTCCTCTCCCTTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp GAGCAATACAGTGCATTTCATCTTAGTCCATTCAGGTGTCTAAGGAGCAGAAGATCTCGGAAACCGCGCTaGAGGATGGCGCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: EQYSAFHLSPFRCLRSRRSRKPR*RMALWC
Trigger: GCACCACAGCGCCATCCTCAAGCGCGGTTTCCGAGA...TCTTCTGCTCCTTAGACACCTGAATGGACTAAGATGAAATGCACTGTATTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp ATTATCCCACAAGAGGGAGCCCAGGCTGCAGTAAAGGAGTTTGGGGATAGTACACTCAAGACCCTCCAATaGTTGGGGAGAAGGCTACAC +
Preference number: 5 (lower is better)
Translates to: IIPQEGAQAAVKEFGDSTLKTLQ*LGRRLH
Trigger: GTGTAGCCTTCTCCCCAACAATTGGAGGGTCTTGAG...TGTACTATCCCCAAACTCCTTTACTGCAGCCTGGGCTCCCTCTTGTGGGATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp TCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATTGGCGCCCCACCCTGTaGTTGTGGATTCGCATTCGT +
Preference number: 5 (lower is better)
Translates to: SALCLFPKKNLSTTVSHYWRPTL*LWIRIR
Trigger: ACGAATGCGAATCCACAACAACAGGGTGGGGCGCCA...ATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp TCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACTGGAAGGCTCCAGAATaGCGGTTGTGGGTATCAATG +
Preference number: 5 (lower is better)
Translates to: SPLTSEWKETTSLRAWTDWKAPE*RLWVSM
Trigger: CATTGATACCCACAACCGCAATTCTGGAGCCTTCCA...GTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CAA 90 bp CCCTCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATAAGACCCTCCAATTGTaGGGGAGAAGGCTACACATC +
Preference number: 5 (lower is better)
Translates to: PSALCLFPKKNLSTTVSHKTLQL*GRRLHI
Trigger: GATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTT...ATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp TCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCCTGGACAGACGCTCCAGAATTGCGGTaGTGGGTATCAATGAAGATG +
Preference number: 5 (lower is better)
Translates to: SPLTSEWKETTSLRAWTDAPELR*WVSMKM
Trigger: CATCTTCATTGATACCCACAACCGCAATTCTGGAGC...GTCTGTCCAGGCCCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CAA 90 bp TCCTTTGGAGGGTCCCCATTAACATCTGAATGGAAGGAGACAACTTCCCTAAGGGCTCCAGAATTGCGGTaGTGGGTATCAATGAAGATG +
Preference number: 5 (lower is better)
Translates to: SFGGSPLTSEWKETTSLRAPELR*WVSMKM
Trigger: CATCTTCATTGATACCCACAACCGCAATTCTGGAGC...CCTTAGGGAAGTTGTCTCCTTCCATTCAGATGTTAATGGGGACCCTCCAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000407467.5
CDS-3UTR CAA 90 bp CAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATCACCCACTCTGTAACCTaGCACTCATCACACAGCACA +
Preference number: 5 (lower is better)
Translates to: QHSVSFPRKTSLPLSPIITHSVT*HSSHST
Trigger: TGTGCTGTGTGATGAGTGCAAGGTTACAGAGTGGGT...GATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp TTTCCAGGTAGATACTTTAAGCTTCCAGGGACCAAGAGTGACCTTGGAAGGAAAACCCACTCTGTAACCTaGCACTCATCACACAGCACA +
Preference number: 5 (lower is better)
Translates to: FPGRYFKLPGTKSDLGRKTHSVT*HSSHST
Trigger: TGTGCTGTGTGATGAGTGCAAGGTTACAGAGTGGGT...TTTCCTTCCAAGGTCACTCTTGGTCCCTGGAAGCTTAAAGTATCTACCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp TCAGCACTCTGTCTCTTTCCCAAGAAAAACCTCTCTACCACTGTCTCCCATTATAAGACCCTCCAATTGTaGGGGAGAAGGCTACACATC +
Preference number: 5 (lower is better)
Translates to: SALCLFPKKNLSTTVSHYKTLQL*GRRLHI
Trigger: GATGTGTAGCCTTCTCCCCAACAATTGGAGGGTCTT...ATAATGGGAGACAGTGGTAGAGAGGTTTTTCTTGGGAAAGAGACAGAGTGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS-3UTR CAA 90 bp GAGCAATACAGTGCATTTCATCTTAGTCCATTCAGGTGTCTAAGGAGCAGAAGAGCTCCAGAATTGCGGTaGTGGGTATCAATGAAGATG +
Preference number: 5 (lower is better)
Translates to: EQYSAFHLSPFRCLRSRRAPELR*WVSMKM
Trigger: CATCTTCATTGATACCCACAACCGCAATTCTGGAGC...TCTTCTGCTCCTTAGACACCTGAATGGACTAAGATGAAATGCACTGTATTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS CCA 72 bp TCCCCTACACCAGGCCCGCGCTTGAGGATGGCGCTGTaGTGCGGCAGGCGGCCGCCGCCCTCAAGCGCGGAG +
Preference number: 6 (lower is better)
Translates to: SPTPGPRLRMAL*CGRRPPPSSAE
Trigger: CTCCGCGCTTGAGGGCGGCGGCCGCCTGCCGCACCACAGCGCCATCCTCAAGCGCGGGCCTGGTGTAGGGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413630.1
CDS GCA 72 bp GCAGACCCTGAAGCGCGGACGCCGTCACGTCGGGGTTaGGCAGGCACAGGCCTAGCTGCCGCTTGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: ADPEARTPSRRG*AGTGLAAACSG
Trigger: GCCTGAGCAAGCGGCAGCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGGCGTCCGCGCTTCAGGGTCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS CCA 72 bp GCACTTTCTCGGAAACCGCGCTTGAGGATGGCGCTGTaGTGCGGCAGGCGGCCGCCGCCCTCAAGCGCGGAG +
Preference number: 6 (lower is better)
Translates to: ALSRKPRLRMAL*CGRRPPPSSAE
Trigger: CTCCGCGCTTGAGGGCGGCGGCCGCCTGCCGCACCACAGCGCCATCCTCAAGCGCGGTTTCCGAGAAAGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS CAA 90 bp GACGCCGTCACGTCGGGGTTGCGCAGGCACAGGCCTAGCTGCCGCTaGCTCAGGCCGGACAGCGTCAAGCACACGGTGTTGGCCGTCAGC +
Preference number: 6 (lower is better)
Translates to: DAVTSGLRRHRPSCR*LRPDSVKHTVLAVS
Trigger: GCTGACGGCCAACACCGTGTGCTTGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS GCA 72 bp GCCGTCACGTCGGGGTTGCGCAGGCACAGGCCTAGCTaGCGCTTGCTCAGGCCGGACAGCGTCAAGCACACG +
Preference number: 6 (lower is better)
Translates to: AVTSGLRRHRPS*RLLRPDSVKHT
Trigger: CGTGTGCTTGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCCTGTGCCTGCGCAACCCCGACGTGACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS GCA 72 bp CGTCGGGGTTGCGCAGGCACAGGCCTAGCTGCCGCTTaGTCAGGCCGGACAGCGTCAAGCACACGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: RRGCAGTGLAAA*SGRTASSTRCW
Trigger: CCAACACCGTGTGCTTGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCCTGTGCCTGCGCAACCCCGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS CCA 72 bp GCTTGCTCAGGCCGGACAGCGTCAAGCACACGGTGTTaGCCGTCAGCGGCGGCTCGCCAGGCAACTTCAGGC +
Preference number: 6 (lower is better)
Translates to: ACSGRTASSTRC*PSAAARQATSG
Trigger: GCCTGAAGTTGCCTGGCGAGCCGCCGCTGACGGCCAACACCGTGTGCTTGACGCTGTCCGGCCTGAGCAAGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS CCA 72 bp GGGCTCCTCCAGCATGTCGAAGCCCGGAGGCTCCGGTaGGCAGATCGATCAGGACCTGCGGGACGGGAGACT +
Preference number: 6 (lower is better)
Translates to: GLLQHVEARRLR*ADRSGPAGRET
Trigger: AGTCTCCCGTCCCGCAGGTCCTGATCGATCTGCCCACCGGAGCCTCCGGGCTTCGACATGCTGGAGGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413630.1
ENST00000475740.1
CDS CAA 72 bp CGCTTGCTCAGGCCGGACAGCGTCAAGCACACGGTGTaGGCCGTCAGCGGCGGCTCGCCAGGCAACTTCAGG +
Preference number: 6 (lower is better)
Translates to: RLLRPDSVKHTV*AVSGGSPGNFR
Trigger: CCTGAAGTTGCCTGGCGAGCCGCCGCTGACGGCCAACACCGTGTGCTTGACGCTGTCCGGCCTGAGCAAGCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS CAA 90 bp CCTAGCTGCCGCTTGCTCAGGCCGGACAGCGTCAAGCACACGGTGTaGGCCGTCAGCGGCGGCTCGCCAGGCAACTTCAGGCCCAGAATC +
Preference number: 6 (lower is better)
Translates to: PSCRLLRPDSVKHTV*AVSGGSPGNFRPRI
Trigger: GATTCTGGGCCTGAAGTTGCCTGGCGAGCCGCCGCTGACGGCCAACACCGTGTGCTTGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS TCA 72 bp GGCCGCCGGGAGGAAGGGAGGGAGGAAGGGAGGGAGTaGTCGAGAGAGCTAGCAAGCCGGCGAGCAAAGGAC +
Preference number: 6 (lower is better)
Translates to: GRREEGREEGRE*SRELASRRAKD
Trigger: GTCCTTTGCTCGCCGGCTTGCTAGCTCTCTCGATCACTCCCTCCCTTCCTCCCTCCCTTCCTCCCGGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS GCA 72 bp CTGGATGTCCCGGGGAGCTTCCCTCGGGACAGTGCCTaGAGCTGCAGCAGTTTGGCCCTCAGCCGATCCTGC +
Preference number: 6 (lower is better)
Translates to: LDVPGSFPRDSA*SCSSLALSRSC
Trigger: GCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGCAGGCACTGTCCCGAGGGAAGCTCCCCGGGACATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407467.5
CDS CAA 72 bp ACGTCGGGGTTGCGCAGGCACAGGCCTAGCTGCCGCTaGCTCAGGCCGGACAGCGTCAAGCACACGGTGTTG +
Preference number: 6 (lower is better)
Translates to: TSGLRRHRPSCR*LRPDSVKHTVL
Trigger: CAACACCGTGTGCTTGACGCTGTCCGGCCTGAGCAAGCGGCAGCTAGGCCTGTGCCTGCGCAACCCCGACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
ENST00000413630.1
ENST00000420388.1
ENST00000475740.1
CDS GCA 72 bp GGTGGGCAGATCGATCAGGACCTCCAGTGGTTTGGGTaGGGGGTCCGAGACAGGCACGGTTGGGTTGCCTGG +
Preference number: 6 (lower is better)
Translates to: GGQIDQDLQWFG*GVRDRHGWVAW
Trigger: CCAGGCAACCCAACCGTGCCTGTCTCGGACCCCGCACCCAAACCACTGGAGGTCCTGATCGATCTGCCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS GCA 72 bp GCTCACCAGCTTGCCCAGGCTGCAGGCCGTGGCTACTaGGTGCATGACCCCAGCAGCCAGCATGGAGAAGGA +
Preference number: 6 (lower is better)
Translates to: AHQLAQAAGRGY*VHDPSSQHGEG
Trigger: TCCTTCTCCATGCTGGCTGCTGGGGTCATGCACGCAGTAGCCACGGCCTGCAGCCTGGGCAAGCTGGTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS CCA 72 bp GGGCTCCTCCAGCATGTCGAAGCCCGGAGGCTCCGGTaGGCAGATCGATCAGGACCTCCAGTGGTTTGGGTG +
Preference number: 6 (lower is better)
Translates to: GLLQHVEARRLR*ADRSGPPVVWV
Trigger: CACCCAAACCACTGGAGGTCCTGATCGATCTGCCCACCGGAGCCTCCGGGCTTCGACATGCTGGAGGAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301061.9
ENST00000403957.5
ENST00000407467.5
CDS CCA 72 bp GCTTCCCTCGGGACAGTGCCTGCAGCTGCAGCAGTTTaGCCCTCAGCCGATCCTGCTCACCACTGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: ASLGTVPAAAAV*PSADPAHHCPS
Trigger: GGAAGGGCAGTGGTGAGCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGCAGGCACTGTCCCGAGGGAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407467.5
CDS TCA 72 bp TGGGCAGATCGATCAGGACCTGCGGGACGGGAGACTTaGTGCGGGTTCAGGAATAGGGCGGCTCGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: WADRSGPAGRET*CGFRNRAARLG
Trigger: CCCCAAGCGAGCCGCCCTATTCCTGAACCCGCATCAAGTCTCCCGTCCCGCAGGTCCTGATCGATCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413630.1
ENST00000475740.1
CDS GCA 72 bp GGGCAGAGAGTGGGGGAAACTCTTGCCTCGGGACAGTaGCTGCAGCTGCAGCAGTTTGGCCCTCAGCCGATC +
Preference number: 6 (lower is better)
Translates to: GQRVGETLASGQ*LQLQQFGPQPI
Trigger: GATCGGCTGAGGGCCAAACTGCTGCAGCTGCAGGCACTGTCCCGAGGCAAGAGTTTCCCCCACTCTCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS GCA 72 bp CTGGCGCCCCACCCTGTTGTTGTGGATTCGCATTCGTaGCTGGATGTCCCGGGGAGCTTCCCACTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: LAPHPVVVDSHS*LDVPGSFPLPF
Trigger: GAAGGGCAGTGGGAAGCTCCCCGGGACATCCAGGCACGAATGCGAATCCACAACAACAGGGTGGGGCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403957.5
CDS GCA 72 bp CTGGCGCCCCACCCTGTTGTTGTGGATTCGCATTCGTaGCTGGATGTCCCGGGGAGCTTCCCTCGGGACAGT +
Preference number: 6 (lower is better)
Translates to: LAPHPVVVDSHS*LDVPGSFPRDS
Trigger: ACTGTCCCGAGGGAAGCTCCCCGGGACATCCAGGCACGAATGCGAATCCACAACAACAGGGTGGGGCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407467.5
CDS CCA 72 bp GGGTGCGGGGTCCGAGACAGGCACGGTTGGGTTGCCTaGGCTTCACTAGTGCTGCTTAAACCGTGGGGAGAC +
Preference number: 6 (lower is better)
Translates to: GCGVRDRHGWVA*ASLVLLKPWGD
Trigger: GTCTCCCCACGGTTTAAGCAGCACTAGTGAAGCCCAGGCAACCCAACCGTGCCTGTCTCGGACCCCGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS CCA 72 bp TCTTGCCTCGGGACAGTGCCTGCAGCTGCAGCAGTTTaGCCCTCAGCCGATCCTGCTCACCACTGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: SCLGTVPAAAAV*PSADPAHHCPS
Trigger: GGAAGGGCAGTGGTGAGCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGCAGGCACTGTCCCGAGGCAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS CCA 72 bp CGCCCCACCCTGTTGTTGTGGATTCGCATTCGTGCCTaGATGTCCCGGGGAGCTTCCCACTGCCCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: RPTLLLWIRIRA*MSRGASHCPSS
Trigger: GCTGGAAGGGCAGTGGGAAGCTCCCCGGGACATCCAGGCACGAATGCGAATCCACAACAACAGGGTGGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403957.5
CDS CCA 72 bp CGCCCCACCCTGTTGTTGTGGATTCGCATTCGTGCCTaGATGTCCCGGGGAGCTTCCCTCGGGACAGTGCCT +
Preference number: 6 (lower is better)
Translates to: RPTLLLWIRIRA*MSRGASLGTVP
Trigger: AGGCACTGTCCCGAGGGAAGCTCCCCGGGACATCCAGGCACGAATGCGAATCCACAACAACAGGGTGGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407467.5
CDS CCA 72 bp GGGCTCCTCCAGCATGTCGAAGCCCGGAGGCTCCGGTaGGCAGATCGATCAGGACCCTTCTCATTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GLLQHVEARRLR*ADRSGPFSFLL
Trigger: GAGGAGGAATGAGAAGGGTCCTGATCGATCTGCCCACCGGAGCCTCCGGGCTTCGACATGCTGGAGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420388.1
CDS GCA 72 bp TGGGGGAAACTCTTGCCTCGGGACAGTGCCTGCAGCTaGAGCAGTTTGGCCCTCAGCCGATCCTGCTCACCA +
Preference number: 6 (lower is better)
Translates to: WGKLLPRDSACS*SSLALSRSCSP
Trigger: TGGTGAGCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGCAGGCACTGTCCCGAGGCAAGAGTTTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS GCA 72 bp AGAGAGTGGGGGAAACTCTTGCCTCGGGACAGTGCCTaGAGCTGCAGCAGTTTGGCCCTCAGCCGATCCTGC +
Preference number: 6 (lower is better)
Translates to: REWGKLLPRDSA*SCSSLALSRSC
Trigger: GCAGGATCGGCTGAGGGCCAAACTGCTGCAGCTGCAGGCACTGTCCCGAGGCAAGAGTTTCCCCCACTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS CCA 72 bp GGCGTTGTCCCAGCTCAGGACTCAAGCGAGCACCCCTaGAACCTTGCCCAATCAGACACAACGCCCGGCACA +
Preference number: 6 (lower is better)
Translates to: GVVPAQDSSEHP*NLAQSDTTPGT
Trigger: TGTGCCGGGCGTTGTGTCTGATTGGGCAAGGTTCCAGGGGTGCTCGCTTGAGTCCTGAGCTGGGACAACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420388.1
CDS CAA 72 bp TTAAACCGTGGGGAGACTGCGCTGGGTTCTGTCCCCTaGTCAGAGCCGCATTCTTCCAGGGCCGGGCCACTC +
Preference number: 6 (lower is better)
Translates to: LNRGETALGSVP*SEPHSSRAGPL
Trigger: GAGTGGCCCGGCCCTGGAAGAATGCGGCTCTGACAAGGGGACAGAACCCAGCGCAGTCTCCCCACGGTTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS GCA 72 bp CTGGCGCCCCACCCTGTTGTTGTGGATTCGCATTCGTaGCTGGATGTCCCGGGGAGCTTCCCTGGAATCCAA +
Preference number: 6 (lower is better)
Translates to: LAPHPVVVDSHS*LDVPGSFPGIQ
Trigger: TTGGATTCCAGGGAAGCTCCCCGGGACATCCAGGCACGAATGCGAATCCACAACAACAGGGTGGGGCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301061.9
CDS GCA 72 bp CCCAGCTCAGGACTCAAGCGAGCACCCCTGGAACCTTaGCCAATCAGACACAACGCCCGGCACACAGACACA +
Preference number: 6 (lower is better)
Translates to: PSSGLKRAPLEP*PIRHNARHTDT
Trigger: TGTGTCTGTGTGCCGGGCGTTGTGTCTGATTGGGCAAGGTTCCAGGGGTGCTCGCTTGAGTCCTGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420388.1
CDS CCA 72 bp CAGTGGTTTGGGTGCGGGGTCCGAGACAGGCACGGTTaGGTTGCCTGGGCTTCACTAGTGCTGCTTAAACCG +
Preference number: 6 (lower is better)
Translates to: QWFGCGVRDRHG*VAWASLVLLKP
Trigger: CGGTTTAAGCAGCACTAGTGAAGCCCAGGCAACCCAACCGTGCCTGTCTCGGACCCCGCACCCAAACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS CAA 72 bp TCCCAGCTCAGGACTCAAGCGAGCACCCCTGGAACCTaGCCCAATCAGACACAACGCCCGGCACACAGACAC +
Preference number: 6 (lower is better)
Translates to: SQLRTQASTPGT*PNQTQRPAHRH
Trigger: GTGTCTGTGTGCCGGGCGTTGTGTCTGATTGGGCAAGGTTCCAGGGGTGCTCGCTTGAGTCCTGAGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420388.1
CDS CAA 90 bp AAGGCGTTGTCCCAGCTCAGGACTCAAGCGAGCACCCCTGGAACCTaGCCCAATCAGACACAACGCCCGGCACACAGACACACACTCACT +
Preference number: 6 (lower is better)
Translates to: KALSQLRTQASTPGT*PNQTQRPAHRHTLT
Trigger: AGTGAGTGTGTGTCTGTGTGCCGGGCGTTGTGTCTGATTGGGCAAGGTTCCAGGGGTGCTCGCTTGAGTCCTGAGCTGGGACAACGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420388.1
CDS GCA 72 bp TGGGCTTCACTAGTGCTGCTTAAACCGTGGGGAGACTaGGCTGGGTTCTGTCCCCTTGTCAGAGCCGCATTC +
Preference number: 6 (lower is better)
Translates to: WASLVLLKPWGD*AGFCPLVRAAF
Trigger: GAATGCGGCTCTGACAAGGGGACAGAACCCAGCGCAGTCTCCCCACGGTTTAAGCAGCACTAGTGAAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS CCA 72 bp TGGGTTGCCTGGGCTTCACTAGTGCTGCTTAAACCGTaGGGAGACTGCGCTGGGTTCTGTCCCCTTGTCAGA +
Preference number: 6 (lower is better)
Translates to: WVAWASLVLLKP*GDCAGFCPLVR
Trigger: TCTGACAAGGGGACAGAACCCAGCGCAGTCTCCCCACGGTTTAAGCAGCACTAGTGAAGCCCAGGCAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301061.9
ENST00000403957.5
CDS CCA 72 bp CGCCCCACCCTGTTGTTGTGGATTCGCATTCGTGCCTaGATGTCCCGGGGAGCTTCCCTGGAATCCAAGAAA +
Preference number: 6 (lower is better)
Translates to: RPTLLLWIRIRA*MSRGASLESKK
Trigger: TTTCTTGGATTCCAGGGAAGCTCCCCGGGACATCCAGGCACGAATGCGAATCCACAACAACAGGGTGGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301061.9