RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WIPI1 (Homo sapiens)

Ensembl gene IDs: ENSG00000070540

Ensembl transcript IDs: ENST00000262139.10, ENST00000546360.5, ENST00000585393.1, ENST00000586815.1, ENST00000587731.1, ENST00000589316.5, ENST00000589459.5, ENST00000590402.1, ENST00000591494.5, ENST00000591744.1, ENST00000592645.5

Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTaGGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCACCCGG +
Preference number: 1 (lower is better)
Translates to: NVSRAHWQPGSWEAW*GVNQVLWFKQWSTR
Trigger: CCGGGTGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR GCA 90 bp GTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCACCCGGGATTCCTaGCCCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTT +
Preference number: 1 (lower is better)
Translates to: VNQVLWFKQWSTRDS*PPFCSHNCTPFFRL
Trigger: AAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGGGGCAGGAATCCCGGGTGCTCCACTGCTTAAACCACAGGACCTGGTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR CAA 90 bp CGCCGTCCTCAGAATAACCTGGCACCGTGGAGGCTGAAGATGCACTaGGTCTGGCTACGGTCGCTGCATAAGACTGAGGTAAGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: RRPQNNLAPWRLKMH*VWLRSLHKTEVRKV
Trigger: GACCTTCCTTACCTCAGTCTTATGCAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCTCCACGGTGCCAGGTTATTCTGAGGACGGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589316.5
3UTR-3UTR CCA 90 bp TGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGGTTAACCAGGTCCTGTaGTTTAAGCAGTGGAGCACC +
Preference number: 2 (lower is better)
Translates to: CIQCLPRPLATRVVGSLVVNQVL*FKQWST
Trigger: GGTGCTCCACTGCTTAAACCACAGGACCTGGTTAAC...CACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR-3UTR CCA 90 bp GTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGTTAACCAGGTCCTGTaGTTTAAGCAGTGGAGCACC +
Preference number: 2 (lower is better)
Translates to: VYTMSPAPIGNQGRGKLGVNQVL*FKQWST
Trigger: GGTGCTCCACTGCTTAAACCACAGGACCTGGTTAAC...ACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR-3UTR TCA 90 bp TTAAATAGCATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCTGGCACCGTGGAGGCTaGAGATGCACTTGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: LNSMMCIQCLPRPLATRVWHRGG*RCTWSG
Trigger: GCCAGACCAAGTGCATCTTCAGCCTCCACGGTGCCA...GACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATGCTATTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589316.5
3UTR-3UTR CCA 90 bp CGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCAGTTAACCAGGTCCTGTaGTTTAAGCAGTGGAGCACC +
Preference number: 2 (lower is better)
Translates to: RGKLGEELTRSCGLSSGAVNQVL*FKQWST
Trigger: GGTGCTCCACTGCTTAAACCACAGGACCTGGTTAAC...TGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR-3UTR CCA 90 bp CACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAGTCTCCCGCGCCCATTaGCAACCAGGGTCGTGGGAA +
Preference number: 2 (lower is better)
Translates to: HNCTPFFRLPCFLQNHLIVSRAH*QPGSWE
Trigger: TTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGAC...TATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR-3UTR CCA 90 bp ACACACTGGTCCCGTCGCAAACTCATGTTCAGGAATAACTTCTCCTCGCAGCGCAATAACCTGGCACCGTaGAGGCTGAAGATGCACTTG +
Preference number: 2 (lower is better)
Translates to: THWSRRKLMFRNNFSSQRNNLAP*RLKMHL
Trigger: CAAGTGCATCTTCAGCCTCCACGGTGCCAGGTTATT...GCGCTGCGAGGAGAAGTTATTCCTGAACATGAGTTTGCGACGGGACCAGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589316.5
3UTR-3UTR CCA 90 bp ATTTTAAATAGCATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGCTGTGGTTTAAGCAGTaGAGCACCCGGGATTCCTGC +
Preference number: 2 (lower is better)
Translates to: ILNSMMCIQCLPRPLATRLWFKQ*STRDSC
Trigger: GCAGGAATCCCGGGTGCTCCACTGCTTAAACCACAG...CCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATGCTATTTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR-3UTR TCA 90 bp GACTTTGCCTGGCTAAAAGAGTCTCTCTCTAAGTATGTAATATACAAGAAATACTCGTGGGAAGCTTGGTaGGGAGTTAACCAGGTCCTG +
Preference number: 2 (lower is better)
Translates to: DFAWLKESLSKYVIYKKYSWEAW*GVNQVL
Trigger: CAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGA...GTATTTCTTGTATATTACATACTTAGAGAGAGACTCTTTTAGCCAGGCAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262139.10
ENST00000589316.5
3UTR-3UTR CCA 90 bp CTGAAATCCTACATTTCTATCAAACAATGCCTTGAGGAGCACAGATTTAGACCAGAGCAGACGAGTCCATaGATAAGTCTGTGGCCCAAT +
Preference number: 2 (lower is better)
Translates to: LKSYISIKQCLEEHRFRPEQTSP*ISLWPN
Trigger: ATTGGGCCACAGACTTATCCATGGACTCGTCTGCTC...TGGTCTAAATCTGTGCTCCTCAAGGCATTGTTTGATAGAAATGTAGGATTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592645.5
3UTR-3UTR TCA 90 bp CTGGTCTCCATCTTTAATATGCAAACAAATCACCTGGGATCTTGTGAGAATCCGGGCTCGAGTAGATCCTaGAATCCTACATTTCTATCA +
Preference number: 2 (lower is better)
Translates to: LVSIFNMQTNHLGSCENPGSSRS*NPTFLS
Trigger: TGATAGAAATGTAGGATTTCAGGATCTACTCGAGCC...CGGATTCTCACAAGATCCCAGGTGATTTGTTTGCATATTAAAGATGGAGACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592645.5
3UTR-3UTR GCA 90 bp TACTCACTGGTCTCCATCTTTAATATGCAAACAAATCACCTGGGATCTTGTGAGATTTCTATCAAACAATaGCTTGAGGAGCACAGATTT +
Preference number: 2 (lower is better)
Translates to: YSLVSIFNMQTNHLGSCEISIKQ*LEEHRF
Trigger: AAATCTGTGCTCCTCAAGGCATTGTTTGATAGAAAT...CTCACAAGATCCCAGGTGATTTGTTTGCATATTAAAGATGGAGACCAGTGAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592645.5
3UTR TCA 72 bp CCCGCCGTCCTCAGAATAACCTGGCACCGTGGAGGCTaGAGATGCACTTGGTCTGGCTACGGTCGCTGCATA +
Preference number: 3 (lower is better)
Translates to: PAVLRITWHRGG*RCTWSGYGRCI
Trigger: TATGCAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCTCCACGGTGCCAGGTTATTCTGAGGACGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589316.5
3UTR TCA 72 bp CGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTaGGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGG +
Preference number: 3 (lower is better)
Translates to: RAHWQPGSWEAW*GVNQVLWFKQW
Trigger: CCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR GCA 72 bp GTCCTGTGGTTTAAGCAGTGGAGCACCCGGGATTCCTaGCCCCCTTTCTGCTCACACAATTGCACTCCATTC +
Preference number: 3 (lower is better)
Translates to: VLWFKQWSTRDS*PPFCSHNCTPF
Trigger: GAATGGAGTGCAATTGTGTGAGCAGAAAGGGGGGCAGGAATCCCGGGTGCTCCACTGCTTAAACCACAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR CCA 72 bp AACCTGGCACCGTGGAGGCTGAAGATGCACTTGGTCTaGCTACGGTCGCTGCATAAGACTGAGGTAAGGAAG +
Preference number: 3 (lower is better)
Translates to: NLAPWRLKMHLV*LRSLHKTEVRK
Trigger: CTTCCTTACCTCAGTCTTATGCAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCTCCACGGTGCCAGGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589316.5
3UTR-3UTR CAA 90 bp TATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGATTCTTCCGCCTTCCTaGTTTTCTCCAAAACCACCT +
Preference number: 3 (lower is better)
Translates to: YTMSPAPIGNQGRGKLGEILPPS*FSPKPP
Trigger: AGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAAT...CTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR-3UTR CAA 90 bp GATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTATTCTTCCGCCTTCCTaGTTTTCTCCAAAACCACCT +
Preference number: 3 (lower is better)
Translates to: DVYTMSPAPIGNQGRGKLILPPS*FSPKPP
Trigger: AGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAAT...AAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR-3UTR CAA 90 bp TCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGAGGCTGAAGATGCACTaGGTCTGGCTACGGTCGCTG +
Preference number: 3 (lower is better)
Translates to: SHNCTPFFRLPCFLQNHLRLKMH*VWLRSL
Trigger: CAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCT...CAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589316.5
3UTR-3UTR CAA 90 bp TCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATTCTTCCGCCTTCCTaGTTTTCTCCAAAACCACCT +
Preference number: 3 (lower is better)
Translates to: SHNCTPFFRLPCFLQNHLILPPS*FSPKPP
Trigger: AGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAAT...CAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR-3UTR CAA 90 bp CTGGTCTCCATCTTTAATATGCAAACAAATCACCTGGGATCTTGTGAGAATCCGATTCTTCCGCCTTCCTaGTTTTCTCCAAAACCACCT +
Preference number: 3 (lower is better)
Translates to: LVSIFNMQTNHLGSCENPILPPS*FSPKPP
Trigger: AGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAAT...CGGATTCTCACAAGATCCCAGGTGATTTGTTTGCATATTAAAGATGGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592645.5
3UTR GCA 72 bp ACAAACCAGTGTACTCACTGGTCTCCATCTTTAATATaGAAACAAATCACCTGGGATCTTGTGAGAATCCGG +
Preference number: 3 (lower is better)
Translates to: TNQCTHWSPSLI*KQITWDLVRIR
Trigger: CCGGATTCTCACAAGATCCCAGGTGATTTGTTTGCATATTAAAGATGGAGACCAGTGAGTACACTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR GCA 90 bp GTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTCTACCACCACCAGGCTaGTGGAGAAGAGGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VYTMSPAPIGNQGRGKLGLPPPG*WRRGAP
Trigger: TGGAGCGCCTCTTCTCCAGCAGCCTGGTGGTGGTAG...ACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp GGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCACCCGGGATTCCTTGGCACCGTGGAGGCTaGAGATGCACTTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GEELTRSCGLSSGAPGIPWHRGG*RCTWSG
Trigger: GCCAGACCAAGTGCATCTTCAGCCTCCACGGTGCCA...AGGAATCCCGGGTGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp GATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTTGGCACCGTGGAGGCTaGAGATGCACTTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: DVYTMSPAPIGNQGRGKLWHRGG*RCTWSG
Trigger: GCCAGACCAAGTGCATCTTCAGCCTCCACGGTGCCA...AAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp CATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGTGGCACCGTGGAGGCTaGAGATGCACTTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: HDVYTMSPAPIGNQGRGKWHRGG*RCTWSG
Trigger: GCCAGACCAAGTGCATCTTCAGCCTCCACGGTGCCA...CTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp TGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGTGCCGTGGTTTTGTGTaGCTGACTACCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: CIQCLPRPLATRVVGSLVCRGFV*LTTTTR
Trigger: CCTGGTGGTGGTAGTCAGTCACACAAAACCACGGCA...CACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTAATAACCTGGCACCGTaGAGGCTGAAGATGCACTTG +
Preference number: 4 (lower is better)
Translates to: QCLPRPLATRVVGSLVRSNNLAP*RLKMHL
Trigger: CAAGTGCATCTTCAGCCTCCACGGTGCCAGGTTATT...ACTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CCA 90 bp TGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGCTGTGGTTTAAGCAGTaGAGCACCCGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: CIQCLPRPLATRVVGSLVLWFKQ*STRDSC
Trigger: GCAGGAATCCCGGGTGCTCCACTGCTTAAACCACAG...CACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CCA 90 bp ACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGGTTAACCAGGTCCTGTaGTTTAAGCAGTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: TMSPAPIGNQGRGKLGEEVNQVL*FKQWST
Trigger: GGTGCTCCACTGCTTAAACCACAGGACCTGGTTAAC...CTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp TCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTTAACCGCAAGCTGTGGGTTTTaGTTAAGACACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SPAPIGNQGRGKLGEELTASCGF*LRHTLL
Trigger: GAGGAGAGTGTGTCTTAATCAAAACCCACAGCTTGC...GGTTAACTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp TGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGCTCTTCTGTTGTTCCTaGGCCAAGCAAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: CIQCLPRPLATRVVGSLVLFCCS*AKQAVG
Trigger: ACCCACAGCTTGCTTGGCTCAGGAACAACAGAAGAG...CACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp TATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGCTCTTCTGTTGTTCCTaGGCCAAGCAAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: YTMSPAPIGNQGRGKLGELFCCS*AKQAVG
Trigger: ACCCACAGCTTGCTTGGCTCAGGAACAACAGAAGAG...CTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp ACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGGGATGTCCTGATTTCTaGGGTGTGCTTCTCATCATG +
Preference number: 4 (lower is better)
Translates to: TMSPAPIGNQGRGKLGEEGCPDF*GVLLIM
Trigger: CATGATGAGAAGCACACCTCAGAAATCAGGACATCC...CTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CCA 90 bp ATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCCCGTCTCGGTGTTACTaGAGGCGCAGAGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: MMCIQCLPRPLATRVVGSPSRCY*RRRGIV
Trigger: CACAATTCCTCTGCGCCTCCAGTAACACCGAGACGG...GCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTTATAAAGGTGTCCACTaGATGACGCAACTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QCLPRPLATRVVGSLVRSYKGVH*MTQLAA
Trigger: GGCTGCTAGTTGCGTCATCCAGTGGACACCTTTATA...ACTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCGTCTCCCGCGCCCATTaGCAACCAGGGTCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSVSRAH*QPGSWE
Trigger: TTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGAC...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp GGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTATTGCTTCCGTGGACTTaGTCCAGCTGCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: GNQGRGKLGEELTRSCGLLLPWT*SSCSTE
Trigger: TTCTGTGGAGCAGCTGGATCAAGTCCACGGAAGCAA...TAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACCCTGGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262139.10
ENST00000589316.5
CDS-3UTR TCA 90 bp ATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCCTGATGCATCATGTCTaGCACCTGGGTAGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: MMCIQCLPRPLATRVVGSLMHHV*HLGREV
Trigger: TACCTCCCTACCCAGGTGTCAGACATGATGCATCAG...GCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp AAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCACCCGGGCTGATGCATCATGTCTaGCACCTGGGTAGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: KLGEELTRSCGLSSGAPGLMHHV*HLGREV
Trigger: TACCTCCCTACCCAGGTGTCAGACATGATGCATCAG...CCCGGGTGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp CACACTGGTCCCGTCGCAAACTCATGTTCAGGAATAACTTCTCCTCGCAGCGCCCTGATGCATCATGTCTaGCACCTGGGTAGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: HTGPVANSCSGITSPRSALMHHV*HLGREV
Trigger: TACCTCCCTACCCAGGTGTCAGACATGATGCATCAG...GGCGCTGCGAGGAGAAGTTATTCCTGAACATGAGTTTGCGACGGGACCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589316.5
CDS-3UTR TCA 90 bp GGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAGCAAAAGCCCTGTCCTaGTGCATCATGTCTGACACC +
Preference number: 4 (lower is better)
Translates to: GNQGRGKLGEELTRSCGLAKALS*CIMSDT
Trigger: GGTGTCAGACATGATGCATCAGGACAGGGCTTTTGC...TAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACCCTGGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp ACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTTCGTTTTGCCCTTCTaGTTTCCACGGCACAAGATT +
Preference number: 4 (lower is better)
Translates to: TMSPAPIGNQGRGKLGEEFVLPF*FPRHKI
Trigger: AATCTTGTGCCGTGGAAATCAGAAGGGCAAAACGAA...CTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR GCA 90 bp CATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGGGAGAAGTTCAAGCGTaGAGTGGCAAAAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: HDVYTMSPAPIGNQGRGKGEVQA*SGKSPV
Trigger: GACAGGGCTTTTGCCACTGCACGCTTGAACTTCTCC...CTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR GCA 90 bp ATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCGGAGAAGTTCAAGCGTaGAGTGGCAAAAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: MMCIQCLPRPLATRVVGSGEVQA*SGKSPV
Trigger: GACAGGGCTTTTGCCACTGCACGCTTGAACTTCTCC...GCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp GTGCTTCTCATCATGACTGCTTCGTTTTGCCCTTCTGATTTCCACGGCACAAGACCACCACCAGGCTGCTaGAGAAGAGGCGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: VLLIMTASFCPSDFHGTRPPPGC*RRGAPR
Trigger: TCGTGGAGCGCCTCTTCTCCAGCAGCCTGGTGGTGG...TCTTGTGCCGTGGAAATCAGAAGGGCAAAACGAAGCAGTCATGATGAGAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589316.5
CDS-3UTR CCA 90 bp TATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGAAGATGCACTTGGTCTaGCTACGGTCGCTGCATAAG +
Preference number: 4 (lower is better)
Translates to: YTMSPAPIGNQGRGKLGEKMHLV*LRSLHK
Trigger: CTTATGCAGCGACCGTAGCCAGACCAAGTGCATCTT...CTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp TATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGTTAACCAGGTCCTGTaGTTTAAGCAGTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: YTMSPAPIGNQGRGKLGEVNQVL*FKQWST
Trigger: GGTGCTCCACTGCTTAAACCACAGGACCTGGTTAAC...CTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR CAA 72 bp CAGAATAACCTGGCACCGTGGAGGCTGAAGATGCACTaGGTCTGGCTACGGTCGCTGCATAAGACTGAGGTA +
Preference number: 4 (lower is better)
Translates to: QNNLAPWRLKMH*VWLRSLHKTEV
Trigger: TACCTCAGTCTTATGCAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCTCCACGGTGCCAGGTTATTCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589316.5
CDS-3UTR TCA 90 bp AATAGCATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGTGCCGTGGTTTTGTGTaGCTGACTACCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: NSMMCIQCLPRPLATRVVCRGFV*LTTTTR
Trigger: CCTGGTGGTGGTAGTCAGTCACACAAAACCACGGCA...CACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATGCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp GTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGTGCCTTTCTTGAAGTaGTACACGTTCATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VYTMSPAPIGNQGRGKLGVPFLK*YTFICR
Trigger: ACGGCAGATGAACGTGTATCACTTCAAGAAAGGCAC...ACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp AAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCACCCGGGAAGCACAATCTCCCCTaGAGTCAGGCTTCCAGGATA +
Preference number: 4 (lower is better)
Translates to: KLGEELTRSCGLSSGAPGKHNLP*SQASRI
Trigger: TATCCTGGAAGCCTGACTTCAGGGGAGATTGTGCTT...CCCGGGTGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp GGTCGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGACAGAGAACACCCGGATaGCTGTGCCTTTTTCAGACG +
Preference number: 4 (lower is better)
Translates to: GRGKLGEELTRSCGLSSGQRTPG*LCLFQT
Trigger: CGTCTGAAAAAGGCACAGTCATCCGGGTGTTCTCTG...TCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp TATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGCAAGCTGTGGGTTTTaGTTAAGACACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: YTMSPAPIGNQGRGKLGEASCGF*LRHTLL
Trigger: GAGGAGAGTGTGTCTTAATCAAAACCCACAGCTTGC...CTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp GTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGCAAGCTGTGGGTTTTaGTTAAGACACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VYTMSPAPIGNQGRGKLGASCGF*LRHTLL
Trigger: GAGGAGAGTGTGTCTTAATCAAAACCCACAGCTTGC...ACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp TGTCCCACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGGCACCGTGGAGGCTaGAGATGCACTTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: CPTIALHSSAFLVFSKTTWHRGG*RCTWSG
Trigger: GCCAGACCAAGTGCATCTTCAGCCTCCACGGTGCCA...GGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR TCA 90 bp AATAGCATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGTCGTGGGAAGCTTGGTaGGGAGTTAACCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: NSMMCIQCLPRPLATRVVSWEAW*GVNQVL
Trigger: CAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGA...CACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATGCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR GCA 90 bp GTGCTTCTCATCATGACTGCTTCGTTTTGCCCTTCTGATTTCCACGGCACAAGACTACCACCACCAGGCTaGTGGAGAAGAGGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VLLIMTASFCPSDFHGTRLPPPG*WRRGAP
Trigger: TGGAGCGCCTCTTCTCCAGCAGCCTGGTGGTGGTAG...TCTTGTGCCGTGGAAATCAGAAGGGCAAAACGAAGCAGTCATGATGAGAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589316.5
CDS-3UTR CCA 90 bp TCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCCCACCACCAGGCTGCTaGAGAAGAGGCGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: SAHTIALHSSAFLVFSKTPPPGC*RRGAPR
Trigger: TCGTGGAGCGCCTCTTCTCCAGCAGCCTGGTGGTGG...GGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp GGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCACCCGGGATTCCTAGTTCAAGCGTGCAGTaGCAAAAGCCCTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: GEELTRSCGLSSGAPGIPSSSVQ*QKPCPD
Trigger: ATCAGGACAGGGCTTTTGCCACTGCACGCTTGAACT...AGGAATCCCGGGTGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGAGTTCAAGCGTGCAGTaGCAAAAGCCCTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: HDVYTMSPAPIGNQGRGKSSSVQ*QKPCPD
Trigger: ATCAGGACAGGGCTTTTGCCACTGCACGCTTGAACT...CTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp GGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAAGATGCACTTGGTCTaGCTACGGTCGCTGCATAAG +
Preference number: 4 (lower is better)
Translates to: GNQGRGKLGEELTRSCGLKMHLV*LRSLHK
Trigger: CTTATGCAGCGACCGTAGCCAGACCAAGTGCATCTT...TAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACCCTGGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp TGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACGTCTCCCGCGCCCATTaGCAACCAGGGTCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: CSHNCTPFFRLPCFLQNHVSRAH*QPGSWE
Trigger: TTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGAC...GTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
3UTR CAA 72 bp AATAGCATGATGTGTATACAATGTCTCCCGCGCCCATaGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: NSMMCIQCLPRP*ATRVVGSLVRS
Trigger: ACTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATGCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp CGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCAAAGCACAATCTCCCCTaGAGTCAGGCTTCCAGGATA +
Preference number: 4 (lower is better)
Translates to: RGKLGEELTRSCGLSSGAKHNLP*SQASRI
Trigger: TATCCTGGAAGCCTGACTTCAGGGGAGATTGTGCTT...TGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp GATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTCAACTTCTGGATCGTTaGGAGGGTACAGATGTTCCT +
Preference number: 4 (lower is better)
Translates to: DVYTMSPAPIGNQGRGKLQLLDR*EGTDVP
Trigger: AGGAACATCTGTACCCTCTCAACGATCCAGAAGTTG...AAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp GTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTTTCGTTTTGCCCTTCTaGTTTCCACGGCACAAGATT +
Preference number: 4 (lower is better)
Translates to: VYTMSPAPIGNQGRGKLGFVLPF*FPRHKI
Trigger: AATCTTGTGCCGTGGAAATCAGAAGGGCAAAACGAA...ACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR GCA 90 bp AATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAGGGCTACCACCACCAGGCTaGTGGAGAAGAGGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: NCTPFFRLPCFLQNHLIGLPPPG*WRRGAP
Trigger: TGGAGCGCCTCTTCTCCAGCAGCCTGGTGGTGGTAG...CCCTATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp ACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATCCACCACCAGGCTGCTaGAGAAGAGGCGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: TQLHSILPPSLFSPKPPDPPPGC*RRGAPR
Trigger: TCGTGGAGCGCCTCTTCTCCAGCAGCCTGGTGGTGG...ATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCCCGTCTCGGTGTTACTaGAGGCGCAGAGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSPSRCY*RRRGIV
Trigger: CACAATTCCTCTGCGCCTCCAGTAACACCGAGACGG...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CCCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCGGTCGAAGGCTCTTCTaGTCGACTGTTGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: PPFCSHNCTPFFRLPCFLGRRLF*STVGDL
Trigger: CAGGTCACCAACAGTCGACCAGAAGAGCCTTCGACC...GAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262139.10
ENST00000546360.5
CDS-3UTR CCA 90 bp ACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATGTCTCCCGCGCCCATTaGCAACCAGGGTCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: TQLHSILPPSLFSPKPPDVSRAH*QPGSWE
Trigger: TTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGAC...ATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCGCAAAAGCCCTGTCCTaGTGCATCATGTCTGACACC +
Preference number: 4 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSAKALS*CIMSDT
Trigger: GGTGTCAGACATGATGCATCAGGACAGGGCTTTTGC...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp AAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCACCCGGGCACTCTCCTCCATCCTaGGGATCCAAATTGTACATA +
Preference number: 4 (lower is better)
Translates to: KLGEELTRSCGLSSGAPGHSPPS*GSKLYI
Trigger: TATGTACAATTTGGATCCTCAGGATGGAGGAGAGTG...CCCGGGTGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp GGTCGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGTGTGCTTCTCATCATaGCTGCTTCGTTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GRGKLGEELTRSCGLSSGVCFSS*LLRFAL
Trigger: AAGGGCAAAACGAAGCAGTCATGATGAGAAGCACAC...TCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp GTGCTTCTCATCATGACTGCTTCGTTTTGCCCTTCTGATTTCCACGGCACAAGATCGTGGGAAGCTTGGTaGGGAGTTAACCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VLLIMTASFCPSDFHGTRSWEAW*GVNQVL
Trigger: CAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGA...TCTTGTGCCGTGGAAATCAGAAGGGCAAAACGAAGCAGTCATGATGAGAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CCA 90 bp AATAGCATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGCCGGTTCAGCCTTATaGACAAGATGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: NSMMCIQCLPRPLATRVVAGSAL*TRCCWS
Trigger: ACTCCAGCAACATCTTGTCCATAAGGCTGAACCGGC...CACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATGCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp GCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCCTGTGGTTTAAGCAGTaGAGCACCCGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: AHTIALHSSAFLVFSKTTLWFKQ*STRDSC
Trigger: GCAGGAATCCCGGGTGCTCCACTGCTTAAACCACAG...GGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CCA 90 bp GTGCTTCTCATCATGACTGCTTCGTTTTGCCCTTCTGATTTCCACGGCACAAGACTGTGGTTTAAGCAGTaGAGCACCCGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLLIMTASFCPSDFHGTRLWFKQ*STRDSC
Trigger: GCAGGAATCCCGGGTGCTCCACTGCTTAAACCACAG...TCTTGTGCCGTGGAAATCAGAAGGGCAAAACGAAGCAGTCATGATGAGAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp GCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTTGCTTCCGTGGACTTaGTCCAGCTGCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: AHTIALHSSAFLVFSKTTLLPWT*SSCSTE
Trigger: TTCTGTGGAGCAGCTGGATCAAGTCCACGGAAGCAA...GGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262139.10
ENST00000589316.5
CDS-3UTR TCA 90 bp GATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTTCTCTGTGCCTTTCTTaGAGTGATACACGTTCATCT +
Preference number: 4 (lower is better)
Translates to: DVYTMSPAPIGNQGRGKLSLCLS*SDTRSS
Trigger: AGATGAACGTGTATCACTTCAAGAAAGGCACAGAGA...AAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAGCACAATCTCCCCTaGAGTCAGGCTTCCAGGATA +
Preference number: 4 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSKHNLP*SQASRI
Trigger: TATCCTGGAAGCCTGACTTCAGGGGAGATTGTGCTT...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp CCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCACAGAGAACACCCGGATaGCTGTGCCTTTTTCAGACG +
Preference number: 4 (lower is better)
Translates to: PFLLTQLHSILPPSLFSPQRTPG*LCLFQT
Trigger: CGTCTGAAAAAGGCACAGTCATCCGGGTGTTCTCTG...TGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp AATAGCATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGTGTGCTTCTCATCATaGCTGCTTCGTTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: NSMMCIQCLPRPLATRVVVCFSS*LLRFAL
Trigger: AAGGGCAAAACGAAGCAGTCATGATGAGAAGCACAC...CACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CCA 90 bp TGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCCGTCTCGGTGTTACTaGAGGCGCAGAGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: CSHNCTPFFRLPCFLQNHPSRCY*RRRGIV
Trigger: CACAATTCCTCTGCGCCTCCAGTAACACCGAGACGG...GTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAGGTCGAAGGCTCTTCTaGTCGACTGTTGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: PFCSHNCTPFFRLPCFLQGRRLF*STVGDL
Trigger: CAGGTCACCAACAGTCGACCAGAAGAGCCTTCGACC...TTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262139.10
ENST00000546360.5
CDS-3UTR CCA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAGTTCAAGCGTGCAGTaGCAAAAGCCCTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSSSSVQ*QKPCPD
Trigger: ATCAGGACAGGGCTTTTGCCACTGCACGCTTGAACT...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAGATGCACTTGGTCTaGCTACGGTCGCTGCATAAG +
Preference number: 4 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSKMHLV*LRSLHK
Trigger: CTTATGCAGCGACCGTAGCCAGACCAAGTGCATCTT...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CCCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCAATAACCTGGCACCGTaGAGGCTGAAGATGCACTTG +
Preference number: 4 (lower is better)
Translates to: PPFCSHNCTPFFRLPCFLNNLAP*RLKMHL
Trigger: CAAGTGCATCTTCAGCCTCCACGGTGCCAGGTTATT...GAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp ACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATTGCCGTGGTTTTGTGTaGCTGACTACCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: TQLHSILPPSLFSPKPPDCRGFV*LTTTTR
Trigger: CCTGGTGGTGGTAGTCAGTCACACAAAACCACGGCA...ATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp AGGCTGAAGATGCACTTGGTCTGGCTACGGTCGCTGCATAAGACTGAGGTAAGGTCTCTGTGCCTTTCTTaGAGTGATACACGTTCATCT +
Preference number: 4 (lower is better)
Translates to: RLKMHLVWLRSLHKTEVRSLCLS*SDTRSS
Trigger: AGATGAACGTGTATCACTTCAAGAAAGGCACAGAGA...CCTTACCTCAGTCTTATGCAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589316.5
CDS-3UTR TCA 90 bp TCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGCAGAGAACACCCGGATaGCTGTGCCTTTTTCAGACG +
Preference number: 4 (lower is better)
Translates to: SHNCTPFFRLPCFLQNHLQRTPG*LCLFQT
Trigger: CGTCTGAAAAAGGCACAGTCATCCGGGTGTTCTCTG...CAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCGGATGTCCTGATTTCTaGGGTGTGCTTCTCATCATG +
Preference number: 4 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSGCPDF*GVLLIM
Trigger: CATGATGAGAAGCACACCTCAGAAATCAGGACATCC...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp TTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACTCGTGGGAAGCTTGGTaGGGAGTTAACCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FCSHNCTPFFRLPCFLQNSWEAW*GVNQVL
Trigger: CAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGA...GTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CCA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCTATAAAGGTGTCCACTaGATGACGCAACTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSYKGVH*MTQLAA
Trigger: GGCTGCTAGTTGCGTCATCCAGTGGACACCTTTATA...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp TTAAATAGCATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTTAACCAGGTCCTGTaGTTTAAGCAGTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: LNSMMCIQCLPRPLATRVVNQVL*FKQWST
Trigger: GGTGCTCCACTGCTTAAACCACAGGACCTGGTTAAC...GACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATGCTATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CCA 90 bp TGTCCAAAATGGGACTCCCAAGTAATAAATGATTTATTCCAGCCACAGCCAAAAGTCTCCCGCGCCCATTaGCAACCAGGGTCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: CPKWDSQVINDLFQPQPKVSRAH*QPGSWE
Trigger: TTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGAC...TTTTGGCTGTGGCTGGAATAAATCATTTATTACTTGGGAGTCCCATTTTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262139.10
CDS-3UTR TCA 90 bp CCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAGTGCCTTTCTTGAAGTaGTACACGTTCATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: PFLLTQLHSILPPSLFSPVPFLK*YTFICR
Trigger: ACGGCAGATGAACGTGTATCACTTCAAGAAAGGCAC...TGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp TTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACGCAAAAGCCCTGTCCTaGTGCATCATGTCTGACACC +
Preference number: 4 (lower is better)
Translates to: FCSHNCTPFFRLPCFLQNAKALS*CIMSDT
Trigger: GGTGTCAGACATGATGCATCAGGACAGGGCTTTTGC...GTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp TTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCTCTTCTGTTGTTCCTaGGCCAAGCAAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: FCSHNCTPFFRLPCFLQNLFCCS*AKQAVG
Trigger: ACCCACAGCTTGCTTGGCTCAGGAACAACAGAAGAG...GTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp GCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCGTGTGCTTCTCATCATaGCTGCTTCGTTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: AHTIALHSSAFLVFSKTTVCFSS*LLRFAL
Trigger: AAGGGCAAAACGAAGCAGTCATGATGAGAAGCACAC...GGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp CCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAGGATGTCCTGATTTCTaGGGTGTGCTTCTCATCATG +
Preference number: 4 (lower is better)
Translates to: PFLLTQLHSILPPSLFSPGCPDF*GVLLIM
Trigger: CATGATGAGAAGCACACCTCAGAAATCAGGACATCC...TGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CCA 90 bp GCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCCACGTTCATCTGCCGTaGTTTTGTGTGACTGACTAC +
Preference number: 4 (lower is better)
Translates to: AHTIALHSSAFLVFSKTTHVHLP*FCVTDY
Trigger: GTAGTCAGTCACACAAAACCACGGCAGATGAACGTG...GGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp TCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCGCTAGTGTTCCCTCATaGGCAGCAATAGTGCAGACT +
Preference number: 4 (lower is better)
Translates to: SAHTIALHSSAFLVFSKTASVPS*AAIVQT
Trigger: AGTCTGCACTATTGCTGCCCATGAGGGAACACTAGC...GGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CCCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCGAGCCAAGCAAGCTGTaGGTTTTGATTAAGACACAC +
Preference number: 4 (lower is better)
Translates to: PPFCSHNCTPFFRLPCFLEPSKL*VLIKTH
Trigger: GTGTGTCTTAATCAAAACCCACAGCTTGCTTGGCTC...GAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp AATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAGGGAATAACCTGGCACCGTaGAGGCTGAAGATGCACTTG +
Preference number: 4 (lower is better)
Translates to: NCTPFFRLPCFLQNHLIGNNLAP*RLKMHL
Trigger: CAAGTGCATCTTCAGCCTCCACGGTGCCAGGTTATT...CCCTATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
ENST00000592645.5
CDS-3UTR CCA 90 bp AATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAGGGGAGCAGACGAGTCCATaGATAAGTCTGTGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: NCTPFFRLPCFLQNHLIGEQTSP*ISLWPN
Trigger: ATTGGGCCACAGACTTATCCATGGACTCGTCTGCTC...CCCTATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR TCA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCTCTCTGTGCCTTTCTTaGAGTGATACACGTTCATCT +
Preference number: 4 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSSLCLS*SDTRSS
Trigger: AGATGAACGTGTATCACTTCAAGAAAGGCACAGAGA...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp TGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCAACTTCTGGATCGTTaGGAGGGTACAGATGTTCCT +
Preference number: 4 (lower is better)
Translates to: CSHNCTPFFRLPCFLQNHQLLDR*EGTDVP
Trigger: AGGAACATCTGTACCCTCTCAACGATCCAGAAGTTG...GTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp CCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCATTCGTTTTGCCCTTCTaGTTTCCACGGCACAAGATT +
Preference number: 4 (lower is better)
Translates to: PFLLTQLHSILPPSLFSPFVLPF*FPRHKI
Trigger: AATCTTGTGCCGTGGAAATCAGAAGGGCAAAACGAA...TGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp CCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAGGATGTCCTGATTTCTaGGGTGTGCTTCTCATCATG +
Preference number: 4 (lower is better)
Translates to: PFCSHNCTPFFRLPCFLQGCPDF*GVLLIM
Trigger: CATGATGAGAAGCACACCTCAGAAATCAGGACATCC...TTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CCA 90 bp CACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAGCCGGTTCAGCCTTATaGACAAGATGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: HNCTPFFRLPCFLQNHLIAGSAL*TRCCWS
Trigger: ACTCCAGCAACATCTTGTCCATAAGGCTGAACCGGC...TATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGTGTTGTGAATATAAATaGACTCTTCTAGGCAAACCA +
Preference number: 4 (lower is better)
Translates to: HDVYTMSPAPIGNQGRGKCCEYK*TLLGKP
Trigger: TGGTTTGCCTAGAAGAGTCCATTTATATTCACAACA...CTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp GGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTATGTTGTGAATATAAATaGACTCTTCTAGGCAAACCA +
Preference number: 4 (lower is better)
Translates to: GNQGRGKLGEELTRSCGLCCEYK*TLLGKP
Trigger: TGGTTTGCCTAGAAGAGTCCATTTATATTCACAACA...TAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACCCTGGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAGCTAGTGTTCCCTCATaGGCAGCAATAGTGCAGACT +
Preference number: 4 (lower is better)
Translates to: HNCTPFFRLPCFLQNHLIASVPS*AAIVQT
Trigger: AGTCTGCACTATTGCTGCCCATGAGGGAACACTAGC...TATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp TTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACGCTAGTGTTCCCTCATaGGCAGCAATAGTGCAGACT +
Preference number: 4 (lower is better)
Translates to: FCSHNCTPFFRLPCFLQNASVPS*AAIVQT
Trigger: AGTCTGCACTATTGCTGCCCATGAGGGAACACTAGC...GTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTGCCGGTCGAAGGCTCTTCTaGTCGACTGTTGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: LEQRISCYRLENRERDSAGRRLF*STVGDL
Trigger: CAGGTCACCAACAGTCGACCAGAAGAGCCTTCGACC...GGCAGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR CCA 90 bp TGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACTATAAAGGTGTCCACTaGATGACGCAACTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CSHNCTPFFRLPCFLQNHYKGVH*MTQLAA
Trigger: GGCTGCTAGTTGCGTCATCCAGTGGACACCTTTATA...GTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAGAGCCAAGCAAGCTGTaGGTTTTGATTAAGACACAC +
Preference number: 4 (lower is better)
Translates to: PFLLTQLHSILPPSLFSPEPSKL*VLIKTH
Trigger: GTGTGTCTTAATCAAAACCCACAGCTTGCTTGGCTC...TGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp ACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAATAACCTGGCACCGTaGAGGCTGAAGATGCACTTG +
Preference number: 4 (lower is better)
Translates to: TQLHSILPPSLFSPKPPDNNLAP*RLKMHL
Trigger: CAAGTGCATCTTCAGCCTCCACGGTGCCAGGTTATT...ATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CCA 90 bp CACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAAATAACCTGGCACCGTaGAGGCTGAAGATGCACTTG +
Preference number: 4 (lower is better)
Translates to: HNCTPFFRLPCFLQNHLINNLAP*RLKMHL
Trigger: CAAGTGCATCTTCAGCCTCCACGGTGCCAGGTTATT...TATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
ENST00000592645.5
CDS-3UTR TCA 90 bp CTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTGCCCTGATGCATCATGTCTaGCACCTGGGTAGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LEQRISCYRLENRERDSALMHHV*HLGREV
Trigger: TACCTCCCTACCCAGGTGTCAGACATGATGCATCAG...GGCAGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR TCA 90 bp CACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATACAACTTCTGGATCGTTaGGAGGGTACAGATGTTCCT +
Preference number: 4 (lower is better)
Translates to: HNCTPFFRLPCFLQNHLIQLLDR*EGTDVP
Trigger: AGGAACATCTGTACCCTCTCAACGATCCAGAAGTTG...TATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp TGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCACTCTCCTCCATCCTaGGGATCCAAATTGTACATA +
Preference number: 4 (lower is better)
Translates to: CSHNCTPFFRLPCFLQNHHSPPS*GSKLYI
Trigger: TATGTACAATTTGGATCCTCAGGATGGAGGAGAGTG...GTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp AATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAGGGCACTCTCCTCCATCCTaGGGATCCAAATTGTACATA +
Preference number: 4 (lower is better)
Translates to: NCTPFFRLPCFLQNHLIGHSPPS*GSKLYI
Trigger: TATGTACAATTTGGATCCTCAGGATGGAGGAGAGTG...CCCTATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR TCA 90 bp CTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTGCCCTCTTCTGTTGTTCCTaGGCCAAGCAAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LEQRISCYRLENRERDSALFCCS*AKQAVG
Trigger: ACCCACAGCTTGCTTGGCTCAGGAACAACAGAAGAG...GGCAGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR TCA 90 bp ATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTTGGCACCGTGGAGGCTaGAGATGCACTTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: ILEQRISCYRLENRERDSWHRGG*RCTWSG
Trigger: GCCAGACCAAGTGCATCTTCAGCCTCCACGGTGCCA...AGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR TCA 90 bp TCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGTTCGTTTTGCCCTTCTaGTTTCCACGGCACAAGATT +
Preference number: 4 (lower is better)
Translates to: SHNCTPFFRLPCFLQNHLFVLPF*FPRHKI
Trigger: AATCTTGTGCCGTGGAAATCAGAAGGGCAAAACGAA...CAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp ATTTTAAATAGCATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTGTGCTTCTCATCATaGCTGCTTCGTTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: ILNSMMCIQCLPRPLATRVCFSS*LLRFAL
Trigger: AAGGGCAAAACGAAGCAGTCATGATGAGAAGCACAC...CCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATGCTATTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR TCA 90 bp TGTCCAAAATGGGACTCCCAAGTAATAAATGATTTATTCCAGCCACAGCCAAAATCGTGGGAAGCTTGGTaGGGAGTTAACCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CPKWDSQVINDLFQPQPKSWEAW*GVNQVL
Trigger: CAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGA...TTTTGGCTGTGGCTGGAATAAATCATTTATTACTTGGGAGTCCCATTTTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262139.10
CDS-3UTR CCA 90 bp ATTTTAAATAGCATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGCACGTTCATCTGCCGTaGTTTTGTGTGACTGACTAC +
Preference number: 4 (lower is better)
Translates to: ILNSMMCIQCLPRPLATRHVHLP*FCVTDY
Trigger: GTAGTCAGTCACACAAAACCACGGCAGATGAACGTG...CCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATGCTATTTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp TCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGGAGCCAAGCAAGCTGTaGGTTTTGATTAAGACACAC +
Preference number: 4 (lower is better)
Translates to: SHNCTPFFRLPCFLQNHLEPSKL*VLIKTH
Trigger: GTGTGTCTTAATCAAAACCCACAGCTTGCTTGGCTC...CAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp ACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATCACGGCACAAGATTATaGGTTCCTAATGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: TQLHSILPPSLFSPKPPDHGTRL*VPNAHR
Trigger: CCTGTGAGCATTAGGAACCCATAATCTTGTGCCGTG...ATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585393.1
CDS-3UTR TCA 90 bp TTTGCCCTTCTGATTTCCACGGCACAAGATTATAGGAGGAAACTCATTCTCATCGTGCCTTTCTTGAAGTaGTACACGTTCATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: FALLISTAQDYRRKLILIVPFLK*YTFICR
Trigger: ACGGCAGATGAACGTGTATCACTTCAAGAAAGGCAC...GATGAGAATGAGTTTCCTCCTATAATCTTGTGCCGTGGAAATCAGAAGGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589316.5
CDS-3UTR GCA 90 bp TTCCAGATCTCAGAGCAGACGAGTCCATGGATAAGTCTGTGGCCCAATCCCCTTATTTCTATCAAACAATaGCTTGAGGAGCACAGATTT +
Preference number: 4 (lower is better)
Translates to: FQISEQTSPWISLWPNPLISIKQ*LEEHRF
Trigger: AAATCTGTGCTCCTCAAGGCATTGTTTGATAGAAAT...AAGGGGATTGGGCCACAGACTTATCCATGGACTCGTCTGCTCTGAGATCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR CCA 90 bp CTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTGCCAGTTCAAGCGTGCAGTaGCAAAAGCCCTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LEQRISCYRLENRERDSASSSVQ*QKPCPD
Trigger: ATCAGGACAGGGCTTTTGCCACTGCACGCTTGAACT...GGCAGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR CCA 90 bp CTGCATTTAAAAGAAGTTAAAGAGTTCCTCCTGTCCCACAATTGCACTCCATTCAAGATGCACTTGGTCTaGCTACGGTCGCTGCATAAG +
Preference number: 4 (lower is better)
Translates to: LHLKEVKEFLLSHNCTPFKMHLV*LRSLHK
Trigger: CTTATGCAGCGACCGTAGCCAGACCAAGTGCATCTT...GAATGGAGTGCAATTGTGGGACAGGAGGAACTCTTTAACTTCTTTTAAATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR CCA 90 bp CTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTGCCAATAACCTGGCACCGTaGAGGCTGAAGATGCACTTG +
Preference number: 4 (lower is better)
Translates to: LEQRISCYRLENRERDSANNLAP*RLKMHL
Trigger: CAAGTGCATCTTCAGCCTCCACGGTGCCAGGTTATT...GGCAGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR TCA 90 bp CTGGTCTCCATCTTTAATATGCAAACAAATCACCTGGGATCTTGTGAGAATCCGTTCGTTTTGCCCTTCTaGTTTCCACGGCACAAGATT +
Preference number: 4 (lower is better)
Translates to: LVSIFNMQTNHLGSCENPFVLPF*FPRHKI
Trigger: AATCTTGTGCCGTGGAAATCAGAAGGGCAAAACGAA...CGGATTCTCACAAGATCCCAGGTGATTTGTTTGCATATTAAAGATGGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR TCA 90 bp CAAATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTAAGCACACAGACTaGGCCGCCCAGTTACGGGTT +
Preference number: 4 (lower is better)
Translates to: QILEQRISCYRLENRERDSKHTD*AAQLRV
Trigger: AACCCGTAACTGGGCGGCTCAGTCTGTGTGCTTAGA...GTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR GCA 90 bp ATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTCAGGGAAAGGGACTCTaGCTCTCGTATGAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: ILEQRISCYRLENRERDSQGKGL*LSYEAK
Trigger: CTTCGCCTCATACGAGAGGCAGAGTCCCTTTCCCTG...AGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR CCA 90 bp CCCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCTGTTGTGAATATAAATaGACTCTTCTAGGCAAACCA +
Preference number: 4 (lower is better)
Translates to: PPFCSHNCTPFFRLPCFLCCEYK*TLLGKP
Trigger: TGGTTTGCCTAGAAGAGTCCATTTATATTCACAACA...GAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CAAATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACCCGTCTCGGTGTTACTaGAGGCGCAGAGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: QILEQRISCYRLENRERDPSRCY*RRRGIV
Trigger: CACAATTCCTCTGCGCCTCCAGTAACACCGAGACGG...GTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR CCA 90 bp GACTTTGCCTGGCTAAAAGAGTCTCTCTCTAAGTATGTAATATACAAGAAATACCTGTGGTTTAAGCAGTaGAGCACCCGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: DFAWLKESLSKYVIYKKYLWFKQ*STRDSC
Trigger: GCAGGAATCCCGGGTGCTCCACTGCTTAAACCACAG...GTATTTCTTGTATATTACATACTTAGAGAGAGACTCTTTTAGCCAGGCAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262139.10
ENST00000589316.5
CDS-3UTR TCA 90 bp ATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTGCAAAAGCCCTGTCCTaGTGCATCATGTCTGACACC +
Preference number: 4 (lower is better)
Translates to: ILEQRISCYRLENRERDSAKALS*CIMSDT
Trigger: GGTGTCAGACATGATGCATCAGGACAGGGCTTTTGC...AGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR TCA 90 bp CTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTGCCCACTCTCCTCCATCCTaGGGATCCAAATTGTACATA +
Preference number: 4 (lower is better)
Translates to: LEQRISCYRLENRERDSAHSPPS*GSKLYI
Trigger: TATGTACAATTTGGATCCTCAGGATGGAGGAGAGTG...GGCAGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR TCA 90 bp TCTATCAAACAATGCCTTGAGGAGCACAGATTTAGACCAAAGTTAGGTCGTTTTGTGTGCTTCTCATCATaGCTGCTTCGTTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SIKQCLEEHRFRPKLGRFVCFSS*LLRFAL
Trigger: AAGGGCAAAACGAAGCAGTCATGATGAGAAGCACAC...AAAACGACCTAACTTTGGTCTAAATCTGTGCTCCTCAAGGCATTGTTTGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR TCA 90 bp TCACTGGTCTCCATCTTTAATATGCAAACAAATCACCTGGGATCTTGTGAGAATGGATGTCCTGATTTCTaGGGTGTGCTTCTCATCATG +
Preference number: 4 (lower is better)
Translates to: SLVSIFNMQTNHLGSCENGCPDF*GVLLIM
Trigger: CATGATGAGAAGCACACCTCAGAAATCAGGACATCC...ATTCTCACAAGATCCCAGGTGATTTGTTTGCATATTAAAGATGGAGACCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR CCA 90 bp CACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATATGGACAAGATGTTGCTaGAGTAGCTGTAATTACAGA +
Preference number: 4 (lower is better)
Translates to: HNCTPFFRLPCFLQNHLIWTRCC*SSCNYR
Trigger: TCTGTAATTACAGCTACTCCAGCAACATCTTGTCCA...TATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp ACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATTGGACAAGATGTTGCTaGAGTAGCTGTAATTACAGA +
Preference number: 4 (lower is better)
Translates to: TQLHSILPPSLFSPKPPDWTRCC*SSCNYR
Trigger: TCTGTAATTACAGCTACTCCAGCAACATCTTGTCCA...ATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CCA 90 bp CTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTGCCGAGCCAAGCAAGCTGTaGGTTTTGATTAAGACACAC +
Preference number: 4 (lower is better)
Translates to: LEQRISCYRLENRERDSAEPSKL*VLIKTH
Trigger: GTGTGTCTTAATCAAAACCCACAGCTTGCTTGGCTC...GGCAGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR TCA 90 bp CAAATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACACTCTGCCTCTCGTATaGGGCGAAGGTTTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: QILEQRISCYRLENRERDTLPLV*GEGFLL
Trigger: TAGAAGGAAACCTTCGCCTCATACGAGAGGCAGAGT...GTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR CCA 90 bp CAAATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACAAGATGCACTTGGTCTaGCTACGGTCGCTGCATAAG +
Preference number: 4 (lower is better)
Translates to: QILEQRISCYRLENRERDKMHLV*LRSLHK
Trigger: CTTATGCAGCGACCGTAGCCAGACCAAGTGCATCTT...GTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR TCA 90 bp ATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTCAACTTCTGGATCGTTaGGAGGGTACAGATGTTCCT +
Preference number: 4 (lower is better)
Translates to: ILEQRISCYRLENRERDSQLLDR*EGTDVP
Trigger: AGGAACATCTGTACCCTCTCAACGATCCAGAAGTTG...AGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR TCA 90 bp CAAATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACGCAAGCTGTGGGTTTTaGTTAAGACACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QILEQRISCYRLENRERDASCGF*LRHTLL
Trigger: GAGGAGAGTGTGTCTTAATCAAAACCCACAGCTTGC...GTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR TCA 90 bp TCTATCAAACAATGCCTTGAGGAGCACAGATTTAGACCAAAGTTAGGTCGTTTTGGCTCGAGTAGATCCTaGAATCCTACATTTCTATCA +
Preference number: 4 (lower is better)
Translates to: SIKQCLEEHRFRPKLGRFGSSRS*NPTFLS
Trigger: TGATAGAAATGTAGGATTTCAGGATCTACTCGAGCC...AAAACGACCTAACTTTGGTCTAAATCTGTGCTCCTCAAGGCATTGTTTGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR GCA 90 bp TGCCTTGAGGAGCACAGATTTAGACCAAAGTTAGGTCGTTTTCCAGATCTCAGATCTCCATCTTTAATATaGAAACAAATCACCTGGGAT +
Preference number: 4 (lower is better)
Translates to: CLEEHRFRPKLGRFPDLRSPSLI*KQITWD
Trigger: ATCCCAGGTGATTTGTTTGCATATTAAAGATGGAGA...TCTGAGATCTGGAAAACGACCTAACTTTGGTCTAAATCTGTGCTCCTCAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR CCA 90 bp CAAATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTATAAAGGTGTCCACTaGATGACGCAACTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QILEQRISCYRLENRERDYKGVH*MTQLAA
Trigger: GGCTGCTAGTTGCGTCATCCAGTGGACACCTTTATA...GTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR CAA 90 bp CAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTTGTCTCCCGCGCCCATaGGCAACCAGGGTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: QCLPRPLATRVVGSLVRSCLPRP*ATRVVG
Trigger: TCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACA...ACTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CAA 90 bp ACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTGTCTCCCGCGCCCATaGGCAACCAGGGTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: TMSPAPIGNQGRGKLGEECLPRP*ATRVVG
Trigger: TCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACA...CTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CAA 90 bp GTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTTGTCTCCCGCGCCCATaGGCAACCAGGGTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: VYTMSPAPIGNQGRGKLGCLPRP*ATRVVG
Trigger: TCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACA...ACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CAA 90 bp GTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTAGGCTGAAGATGCACTaGGTCTGGCTACGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: VYTMSPAPIGNQGRGKLGRLKMH*VWLRSL
Trigger: CAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCT...ACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp CATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGGCAAACCAGCAGCCTTaGCCGGTTCAGCCTTATGGA +
Preference number: 5 (lower is better)
Translates to: HDVYTMSPAPIGNQGRGKANQQP*PVQPYG
Trigger: TCCATAAGGCTGAACCGGCAAAGGCTGCTGGTTTGC...CTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp ACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGGAGCACATAGACCTGTaGGGTTTGCAGGAATATCCA +
Preference number: 5 (lower is better)
Translates to: TMSPAPIGNQGRGKLGEEEHIDL*GLQEYP
Trigger: TGGATATTCCTGCAAACCCAACAGGTCTATGTGCTC...CTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp TGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGGACGCACTTGCTAGTTaGGAGCCTGAGGCATTGAAG +
Preference number: 5 (lower is better)
Translates to: CIQCLPRPLATRVVGSLVDALAS*EPEALK
Trigger: CTTCAATGCCTCAGGCTCCAAACTAGCAAGTGCGTC...CACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp TCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTTAACCGAACTCATAGAGCTTTaGCCCATCAGGGACAGAGAA +
Preference number: 5 (lower is better)
Translates to: SPAPIGNQGRGKLGEELTELIEL*PIRDRE
Trigger: TTCTCTGTCCCTGATGGGCAAAAGCTCTATGAGTTC...GGTTAACTCCTCACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp TGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTGGTGTCTTCTGGTCGACTGTaGGTGACCTGTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CIQCLPRPLATRVVGSLVSSGRL*VTCSSL
Trigger: CAAGCTGGAACAGGTCACCAACAGTCGACCAGAAGA...CACCAAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262139.10
ENST00000546360.5
CDS-3UTR CAA 90 bp CGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCAAGGCTGAAGATGCACTaGGTCTGGCTACGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: RGKLGEELTRSCGLSSGARLKMH*VWLRSL
Trigger: CAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCT...TGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp CCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCATGTCTCCCGCGCCCATaGGCAACCAGGGTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: PFLLTQLHSILPPSLFSPCLPRP*ATRVVG
Trigger: TCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACA...TGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CAA 90 bp GGCAACCAGGGTCGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTACTGGTCGATTGCCTGTaGGTGACCTGTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GNQGRGKLGEELTRSCGLLVDCL*VTCSSL
Trigger: CAAGCTGGAACAGGTCACCAACAGGCAATCGACCAG...TAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACCCTGGTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589316.5
CDS-3UTR CAA 90 bp GATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCTTATTGCTTCCGTGGACTaGATCCAGCTGCTCCACAGA +
Preference number: 5 (lower is better)
Translates to: DVYTMSPAPIGNQGRGKLIASVD*IQLLHR
Trigger: TCTGTGGAGCAGCTGGATCAAGTCCACGGAAGCAAT...AAGCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262139.10
ENST00000589316.5
CDS-3UTR CAA 90 bp AAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCACCCGGGGTGACCTGTTCCAGCTaGAAGATGTGTACCGTCTCG +
Preference number: 5 (lower is better)
Translates to: KLGEELTRSCGLSSGAPGVTCSS*KMCTVS
Trigger: CGAGACGGTACACATCTTCAAGCTGGAACAGGTCAC...CCCGGGTGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp GGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCACCCGGGATTCCTGTGACCTGTTCCAGCTaGAAGATGTGTACCGTCTCG +
Preference number: 5 (lower is better)
Translates to: GEELTRSCGLSSGAPGIPVTCSS*KMCTVS
Trigger: CGAGACGGTACACATCTTCAAGCTGGAACAGGTCAC...AGGAATCCCGGGTGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp ACACACTGGTCCCGTCGCAAACTCATGTTCAGGAATAACTTCTCCTCGCAGCGCGGCTCTTCTGGTCGATaGCCTGTTGGTGACCTGTTC +
Preference number: 5 (lower is better)
Translates to: THWSRRKLMFRNNFSSQRGSSGR*PVGDLF
Trigger: GAACAGGTCACCAACAGGCAATCGACCAGAAGAGCC...GCGCTGCGAGGAGAAGTTATTCCTGAACATGAGTTTGCGACGGGACCAGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589316.5
CDS TCA 90 bp TCTGCCTCTCGTATGAGGCGAAGGTTTCCTTCTAAGCACACAGACTaGGCCGCCCAGTTACGGGTTCCTAATGCTCACAGGAGGAAACTC +
Preference number: 5 (lower is better)
Translates to: SASRMRRRFPSKHTD*AAQLRVPNAHRRKL
Trigger: GAGTTTCCTCCTGTGAGCATTAGGAACCCGTAACTGGGCGGCTCAGTCTGTGTGCTTAGAAGGAAACCTTCGCCTCATACGAGAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590402.1
ENST00000591744.1
CDS-3UTR CAA 90 bp GGTCGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAATTGCTTCCGTGGACTaGATCCAGCTGCTCCACAGA +
Preference number: 5 (lower is better)
Translates to: GRGKLGEELTRSCGLSSGIASVD*IQLLHR
Trigger: TCTGTGGAGCAGCTGGATCAAGTCCACGGAAGCAAT...TCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262139.10
ENST00000589316.5
CDS-3UTR CAA 90 bp GGTCGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGATTGGAGCCTGAGGCATaGAAGGTGATGGCAGCTAGT +
Preference number: 5 (lower is better)
Translates to: GRGKLGEELTRSCGLSSGLEPEA*KVMAAS
Trigger: ACTAGCTGCCATCACCTTCAATGCCTCAGGCTCCAA...TCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp CGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGCAGACGCACTTGCTAGTTaGGAGCCTGAGGCATTGAAG +
Preference number: 5 (lower is better)
Translates to: RGKLGEELTRSCGLSSGADALAS*EPEALK
Trigger: CTTCAATGCCTCAGGCTCCAAACTAGCAAGTGCGTC...TGCTCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp ATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCCTTTTTCAGACGCACTaGCTAGTTTGGAGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: MMCIQCLPRPLATRVVGSLFQTH*LVWSLR
Trigger: CCTCAGGCTCCAAACTAGCAAGTGCGTCTGAAAAAG...GCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp ATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCGCAACTTCTGGATCGTaGAGAGGGTACAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: MMCIQCLPRPLATRVVGSATSGS*RGYRCS
Trigger: GGAACATCTGTACCCTCTCAACGATCCAGAAGTTGC...GCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp AATAGCATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGACGCACTTGCTAGTTaGGAGCCTGAGGCATTGAAG +
Preference number: 5 (lower is better)
Translates to: NSMMCIQCLPRPLATRVVDALAS*EPEALK
Trigger: CTTCAATGCCTCAGGCTCCAAACTAGCAAGTGCGTC...CACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATGCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp GGTCGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGACTTTTTCAGACGCACTaGCTAGTTTGGAGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: GRGKLGEELTRSCGLSSGLFQTH*LVWSLR
Trigger: CCTCAGGCTCCAAACTAGCAAGTGCGTCTGAAAAAG...TCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp ATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCGAACTCATAGAGCTTTaGCCCATCAGGGACAGAGAA +
Preference number: 5 (lower is better)
Translates to: MMCIQCLPRPLATRVVGSELIEL*PIRDRE
Trigger: TTCTCTGTCCCTGATGGGCAAAAGCTCTATGAGTTC...GCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS TCA 90 bp GTTCAAGCGTGCAGTGGCAAAAGCCCTGTCCTGATGCATCATGTCTaGCACCTGGGTAGGGAGGTAGTTGGTAGCAGCCATAAACATCTT +
Preference number: 5 (lower is better)
Translates to: VQACSGKSPVLMHHV*HLGREVVGSSHKHL
Trigger: AAGATGTTTATGGCTGCTACCAACTACCTCCCTACCCAGGTGTCAGACATGATGCATCAGGACAGGGCTTTTGCCACTGCACGCTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000587731.1
ENST00000589316.5
ENST00000589459.5
ENST00000591494.5
ENST00000591744.1
CDS TCA 90 bp TTGCCACTGAGACTGCCAGTGAAGAACAAATCAATGCAAGGGCACTaGAGCTTGTCGTTCTTGGCGAAGGGACAACTCTACACGACCAGC +
Preference number: 5 (lower is better)
Translates to: LPLRLPVKNKSMQGH*SLSFLAKGQLYTTS
Trigger: GCTGGTCGTGTAGAGTTGTCCCTTCGCCAAGAACGACAAGCTTCAGTGCCCTTGCATTGATTTGTTCTTCACTGGCAGTCTCAGTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587731.1
CDS TCA 90 bp TGTGTGTTATTAATCCTGGCACTTTTCCAGATGATTACCACATGCTaGGGGCACCTGACACAGAGCCCGGTGCAGAGCACTTGCCCACTA +
Preference number: 5 (lower is better)
Translates to: CVLLILALFQMITTC*GHLTQSPVQSTCPL
Trigger: TAGTGGGCAAGTGCTCTGCACCGGGCTCTGTGTCAGGTGCCCTCAGCATGTGGTAATCATCTGGAAAAGTGCCAGGATTAATAACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587731.1
CDS-3UTR CAA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCTTGGAGCCTGAGGCATaGAAGGTGATGGCAGCTAGT +
Preference number: 5 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSLEPEA*KVMAAS
Trigger: ACTAGCTGCCATCACCTTCAATGCCTCAGGCTCCAA...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp GGTCGTGGGAAGCTTGGTGAGGAGTTAACCAGGTCCTGTGGTTTAAGCAGTGGAGAACTCATAGAGCTTTaGCCCATCAGGGACAGAGAA +
Preference number: 5 (lower is better)
Translates to: GRGKLGEELTRSCGLSSGELIEL*PIRDRE
Trigger: TTCTCTGTCCCTGATGGGCAAAAGCTCTATGAGTTC...TCCACTGCTTAAACCACAGGACCTGGTTAACTCCTCACCAAGCTTCCCACGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp CATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGAGCAAGCTGTGGGTTTaGATTAAGACACACTCTCCT +
Preference number: 5 (lower is better)
Translates to: HDVYTMSPAPIGNQGRGKSKLWV*IKTHSP
Trigger: AGGAGAGTGTGTCTTAATCAAAACCCACAGCTTGCT...CTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp TGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACAGGCTGAAGATGCACTaGGTCTGGCTACGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: CSHNCTPFFRLPCFLQNHRLKMH*VWLRSL
Trigger: CAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCT...GTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp ATGATGTGTATACAATGTCTCCCGCGCCCATTGGCAACCAGGGTCGTGGGAAGCATTCTTCCGCCTTCCTaGTTTTCTCCAAAACCACCT +
Preference number: 5 (lower is better)
Translates to: MMCIQCLPRPLATRVVGSILPPS*FSPKPP
Trigger: AGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAAT...GCTTCCCACGACCCTGGTTGCCAATGGGCGCGGGAGACATTGTATACACATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CAA 90 bp AATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAGGGGCAAACCAGCAGCCTTaGCCGGTTCAGCCTTATGGA +
Preference number: 5 (lower is better)
Translates to: NCTPFFRLPCFLQNHLIGANQQP*PVQPYG
Trigger: TCCATAAGGCTGAACCGGCAAAGGCTGCTGGTTTGC...CCCTATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp GCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCGTGACCTGTTCCAGCTaGAAGATGTGTACCGTCTCG +
Preference number: 5 (lower is better)
Translates to: AHTIALHSSAFLVFSKTTVTCSS*KMCTVS
Trigger: CGAGACGGTACACATCTTCAAGCTGGAACAGGTCAC...GGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCGCAACTTCTGGATCGTaGAGAGGGTACAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSATSGS*RGYRCS
Trigger: GGAACATCTGTACCCTCTCAACGATCCAGAAGTTGC...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS CCA 90 bp CTCCTCCATCCTGAGGATCCAAATTGTACATATAAAGGTGTCCACTaGATGACGCAACTAGCAGCCGTGGCAACTTCTGGATCGTTGAGA +
Preference number: 5 (lower is better)
Translates to: LLHPEDPNCTYKGVH*MTQLAAVATSGSLR
Trigger: TCTCAACGATCCAGAAGTTGCCACGGCTGCTAGTTGCGTCATCCAGTGGACACCTTTATATGTACAATTTGGATCCTCAGGATGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000587731.1
ENST00000589316.5
ENST00000589459.5
ENST00000591744.1
CDS-3UTR CAA 90 bp TCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCTTGGAGCCTGAGGCATaGAAGGTGATGGCAGCTAGT +
Preference number: 5 (lower is better)
Translates to: SAHTIALHSSAFLVFSKTLEPEA*KVMAAS
Trigger: ACTAGCTGCCATCACCTTCAATGCCTCAGGCTCCAA...GGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp GTGCTTCTCATCATGACTGCTTCGTTTTGCCCTTCTGATTTCCACGGCACAAGACTTTTTCAGACGCACTaGCTAGTTTGGAGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: VLLIMTASFCPSDFHGTRLFQTH*LVWSLR
Trigger: CCTCAGGCTCCAAACTAGCAAGTGCGTCTGAAAAAG...TCTTGTGCCGTGGAAATCAGAAGGGCAAAACGAAGCAGTCATGATGAGAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589316.5
CDS-3UTR CAA 90 bp CCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAATCTTCTGGTCGACTGTaGGTGACCTGTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PFCSHNCTPFFRLPCFLQSSGRL*VTCSSL
Trigger: CAAGCTGGAACAGGTCACCAACAGTCGACCAGAAGA...TTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262139.10
ENST00000546360.5
CDS-3UTR CAA 90 bp GCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCGCAACTTCTGGATCGTaGAGAGGGTACAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: AHTIALHSSAFLVFSKTTATSGS*RGYRCS
Trigger: GGAACATCTGTACCCTCTCAACGATCCAGAAGTTGC...GGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp CCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAATAGACCTGTTGGGTTaGCAGGAATATCCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: PFCSHNCTPFFRLPCFLQIDLLG*QEYPGG
Trigger: CCCTCCTGGATATTCCTGCAAACCCAACAGGTCTAT...TTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp CCCCTTTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCATTCTTCCGCCTTCCTaGTTTTCTCCAAAACCACCT +
Preference number: 5 (lower is better)
Translates to: PLSAHTIALHSSAFLVFSILPPS*FSPKPP
Trigger: AGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAAT...GGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS TCA 90 bp GCAGACTGTTTTCAGGGAGTTTCCATCATAAAGCACAATCTCCCCTaGAGTCAGGCTTCCAGGATAGGCCAGGTAAGAATTGGAATGGTT +
Preference number: 5 (lower is better)
Translates to: ADCFQGVSIIKHNLP*SQASRIGQVRIGMV
Trigger: AACCATTCCAATTCTTACCTGGCCTATCCTGGAAGCCTGACTTCAGGGGAGATTGTGCTTTATGATGGAAACTCCCTGAAAACAGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000586815.1
ENST00000589316.5
ENST00000589459.5
ENST00000591494.5
CDS-3UTR CAA 90 bp TCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCGAGCACATAGACCTGTaGGGTTTGCAGGAATATCCA +
Preference number: 5 (lower is better)
Translates to: SAHTIALHSSAFLVFSKTEHIDL*GLQEYP
Trigger: TGGATATTCCTGCAAACCCAACAGGTCTATGTGCTC...GGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp TGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACAGCAAGCTGTGGGTTTaGATTAAGACACACTCTCCT +
Preference number: 5 (lower is better)
Translates to: CSHNCTPFFRLPCFLQNHSKLWV*IKTHSP
Trigger: AGGAGAGTGTGTCTTAATCAAAACCCACAGCTTGCT...GTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp AATCCTACATTTCTATCAAACAATGCCTTGAGGAGCACAGATTTAGACCAAAGTAGGCTGAAGATGCACTaGGTCTGGCTACGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: NPTFLSNNALRSTDLDQSRLKMH*VWLRSL
Trigger: CAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCT...ACTTTGGTCTAAATCTGTGCTCCTCAAGGCATTGTTTGATAGAAATGTAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR CAA 90 bp TCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCATTCTTCCGCCTTCCTaGTTTTCTCCAAAACCACCT +
Preference number: 5 (lower is better)
Translates to: SAHTIALHSSAFLVFSKTILPPS*FSPKPP
Trigger: AGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAAT...GGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
CDS-3UTR CAA 90 bp TTCTGCTCACACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACAGCAAGCTGTGGGTTTaGATTAAGACACACTCTCCT +
Preference number: 5 (lower is better)
Translates to: FCSHNCTPFFRLPCFLQNSKLWV*IKTHSP
Trigger: AGGAGAGTGTGTCTTAATCAAAACCCACAGCTTGCT...GTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTGTGAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
CDS-3UTR CAA 90 bp ATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTAGGCTGAAGATGCACTaGGTCTGGCTACGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: ILEQRISCYRLENRERDSRLKMH*VWLRSL
Trigger: CAGCGACCGTAGCCAGACCAAGTGCATCTTCAGCCT...AGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR CAA 90 bp CACAATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAATTCTTCCGCCTTCCTaGTTTTCTCCAAAACCACCT +
Preference number: 5 (lower is better)
Translates to: HNCTPFFRLPCFLQNHLIILPPS*FSPKPP
Trigger: AGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAAT...TATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000585393.1
ENST00000589316.5
ENST00000592645.5
CDS-3UTR CAA 90 bp AGATTTAGACCAAAGTTAGGTCGTTTTCCAGATCTCAGAGCAGACGAGTCCATGATTCTTCCGCCTTCCTaGTTTTCTCCAAAACCACCT +
Preference number: 5 (lower is better)
Translates to: RFRPKLGRFPDLRADESMILPPS*FSPKPP
Trigger: AGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAAT...CATGGACTCGTCTGCTCTGAGATCTGGAAAACGACCTAACTTTGGTCTAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR CAA 90 bp AATTGCACTCCATTCTTCCGCCTTCCTTGTTTTCTCCAAAACCACCTGATAGGGCTATCAAACAATGCCTaGAGGAGCACAGATTTAGAC +
Preference number: 5 (lower is better)
Translates to: NCTPFFRLPCFLQNHLIGLSNNA*RSTDLD
Trigger: GTCTAAATCTGTGCTCCTCAAGGCATTGTTTGATAG...CCCTATCAGGTGGTTTTGGAGAAAACAAGGAAGGCGGAAGAATGGAGTGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592645.5
CDS-3UTR CAA 90 bp CAAATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACGTGACCTGTTCCAGCTaGAAGATGTGTACCGTCTCG +
Preference number: 5 (lower is better)
Translates to: QILEQRISCYRLENRERDVTCSS*KMCTVS
Trigger: CGAGACGGTACACATCTTCAAGCTGGAACAGGTCAC...GTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR CAA 90 bp ATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTTCTTCTGGTCGACTGTaGGTGACCTGTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ILEQRISCYRLENRERDSSSGRL*VTCSSL
Trigger: CAAGCTGGAACAGGTCACCAACAGTCGACCAGAAGA...AGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR CAA 90 bp ATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACTCTGCAACTTCTGGATCGTaGAGAGGGTACAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: ILEQRISCYRLENRERDSATSGS*RGYRCS
Trigger: GGAACATCTGTACCCTCTCAACGATCCAGAAGTTGC...AGAGTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS-3UTR CAA 90 bp CAAATACTAGAGCAGAGAATTAGTTGTTATAGATTAGAAAACAGGGAAAGGGACAGCAAGCTGTGGGTTTaGATTAAGACACACTCTCCT +
Preference number: 5 (lower is better)
Translates to: QILEQRISCYRLENRERDSKLWV*IKTHSP
Trigger: AGGAGAGTGTGTCTTAATCAAAACCCACAGCTTGCT...GTCCCTTTCCCTGTTTTCTAATCTATAACAACTAATTCTCTGCTCTAGTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591744.1
CDS CAA 72 bp CTGAGGGCACCTGACACAGAGCCCGGTGCAGAGCACTaGCCCACTAGAGGTTTGCCACTGAGACTGCCAGTG +
Preference number: 6 (lower is better)
Translates to: LRAPDTEPGAEH*PTRGLPLRLPV
Trigger: CACTGGCAGTCTCAGTGGCAAACCTCTAGTGGGCAAGTGCTCTGCACCGGGCTCTGTGTCAGGTGCCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587731.1
CDS CAA 90 bp GCACCTGACACAGAGCCCGGTGCAGAGCACTTGCCCACTAGAGGTTaGCCACTGAGACTGCCAGTGAAGAACAAATCAATGCAAGGGCAC +
Preference number: 6 (lower is better)
Translates to: APDTEPGAEHLPTRG*PLRLPVKNKSMQGH
Trigger: GTGCCCTTGCATTGATTTGTTCTTCACTGGCAGTCTCAGTGGCAAACCTCTAGTGGGCAAGTGCTCTGCACCGGGCTCTGTGTCAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587731.1
CDS CAA 72 bp GGCTCTTCTGGTCGACTGTTGGTGACCTGTTCCAGCTaGAAGATGTGTACCGTCTCGGTGTTACTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: GSSGRLLVTCSS*KMCTVSVLLEA
Trigger: CGCCTCCAGTAACACCGAGACGGTACACATCTTCAAGCTGGAACAGGTCACCAACAGTCGACCAGAAGAGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000591494.5
ENST00000591744.1
CDS TCA 72 bp CGTATGAGGCGAAGGTTTCCTTCTAAGCACACAGACTaGGCCGCCCAGTTACGGGTTCCTAATGCTCACAGG +
Preference number: 6 (lower is better)
Translates to: RMRRRFPSKHTD*AAQLRVPNAHR
Trigger: CCTGTGAGCATTAGGAACCCGTAACTGGGCGGCTCAGTCTGTGTGCTTAGAAGGAAACCTTCGCCTCATACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590402.1
ENST00000591744.1
CDS CAA 72 bp CTTCTGGTCGATTGCCTGTTGGTGACCTGTTCCAGCTaGAAGATGTGTACCGTCTCGGTGTTACTGGAGGCG +
Preference number: 6 (lower is better)
Translates to: LLVDCLLVTCSS*KMCTVSVLLEA
Trigger: CGCCTCCAGTAACACCGAGACGGTACACATCTTCAAGCTGGAACAGGTCACCAACAGGCAATCGACCAGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589316.5
ENST00000589459.5
CDS CAA 90 bp TCGAAGGCTCTTCTGGTCGATTGCCTGTTGGTGACCTGTTCCAGCTaGAAGATGTGTACCGTCTCGGTGTTACTGGAGGCGCAGAGGAAT +
Preference number: 6 (lower is better)
Translates to: SKALLVDCLLVTCSS*KMCTVSVLLEAQRN
Trigger: ATTCCTCTGCGCCTCCAGTAACACCGAGACGGTACACATCTTCAAGCTGGAACAGGTCACCAACAGGCAATCGACCAGAAGAGCCTTCGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589316.5
ENST00000589459.5
CDS GCA 72 bp GGTACAGATGTTCCTCTGTCCGGAGAAGTTCAAGCGTaGAGTGGCAAAAGCCCTGTCCTGATGCATCATGTC +
Preference number: 6 (lower is better)
Translates to: GTDVPLSGEVQA*SGKSPVLMHHV
Trigger: GACATGATGCATCAGGACAGGGCTTTTGCCACTGCACGCTTGAACTTCTCCGGACAGAGGAACATCTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000587731.1
ENST00000589316.5
ENST00000589459.5
ENST00000591494.5
ENST00000591744.1
CDS CCA 72 bp AGATGTTCCTCTGTCCGGAGAAGTTCAAGCGTGCAGTaGCAAAAGCCCTGTCCTGATGCATCATGTCTGACA +
Preference number: 6 (lower is better)
Translates to: RCSSVRRSSSVQ*QKPCPDASCLT
Trigger: TGTCAGACATGATGCATCAGGACAGGGCTTTTGCCACTGCACGCTTGAACTTCTCCGGACAGAGGAACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000587731.1
ENST00000589316.5
ENST00000589459.5
ENST00000591494.5
ENST00000591744.1
CDS CAA 72 bp TTTTCAGACGCACTTGCTAGTTTGGAGCCTGAGGCATaGAAGGTGATGGCAGCTAGTGTTCCCTCATGGGCA +
Preference number: 6 (lower is better)
Translates to: FSDALASLEPEA*KVMAASVPSWA
Trigger: TGCCCATGAGGGAACACTAGCTGCCATCACCTTCAATGCCTCAGGCTCCAAACTAGCAAGTGCGTCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000586815.1
ENST00000589316.5
ENST00000589459.5
ENST00000591494.5
CDS CCA 72 bp GAGGCATTGAAGGTGATGGCAGCTAGTGTTCCCTCATaGGCAGCAATAGTGCAGACTGTTTTCAGGGAGTTT +
Preference number: 6 (lower is better)
Translates to: EALKVMAASVPS*AAIVQTVFREF
Trigger: AAACTCCCTGAAAACAGTCTGCACTATTGCTGCCCATGAGGGAACACTAGCTGCCATCACCTTCAATGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000586815.1
ENST00000589316.5
ENST00000589459.5
ENST00000591494.5
CDS CCA 72 bp ACAAATCAATGCAAGGGCACTGAAGCTTGTCGTTCTTaGCGAAGGGACAACTCTACACGACCAGCTCTCGAA +
Preference number: 6 (lower is better)
Translates to: TNQCKGTEACRS*RRDNSTRPALE
Trigger: TTCGAGAGCTGGTCGTGTAGAGTTGTCCCTTCGCCAAGAACGACAAGCTTCAGTGCCCTTGCATTGATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587731.1
CDS CAA 72 bp ATACCTTTTCATCCCTCTCCGGAACTCATAGAGCTTTaGCCCATCAGGGACAGAGAACACCCGGATGACTGT +
Preference number: 6 (lower is better)
Translates to: IPFHPSPELIEL*PIRDREHPDDC
Trigger: ACAGTCATCCGGGTGTTCTCTGTCCCTGATGGGCAAAAGCTCTATGAGTTCCGGAGAGGGATGAAAAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
ENST00000589459.5
ENST00000591494.5
CDS CAA 90 bp GATTGTCACATACCTTTTCATCCCTCTCCGGAACTCATAGAGCTTTaGCCCATCAGGGACAGAGAACACCCGGATGACTGTGCCTTTTTC +
Preference number: 6 (lower is better)
Translates to: DCHIPFHPSPELIEL*PIRDREHPDDCAFF
Trigger: GAAAAAGGCACAGTCATCCGGGTGTTCTCTGTCCCTGATGGGCAAAAGCTCTATGAGTTCCGGAGAGGGATGAAAAGGTATGTGACAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000589316.5
ENST00000589459.5
ENST00000591494.5
CDS CAA 90 bp TCACATACTTTTTCAGACGCACTTGCTAGTTTGGAGCCTGAGGCATaGAAGGTGATGGCAGCTAGTGTTCCCTCATGGGCAGCAATAGTG +
Preference number: 6 (lower is better)
Translates to: SHTFSDALASLEPEA*KVMAASVPSWAAIV
Trigger: CACTATTGCTGCCCATGAGGGAACACTAGCTGCCATCACCTTCAATGCCTCAGGCTCCAAACTAGCAAGTGCGTCTGAAAAAGTATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586815.1
CDS TCA 72 bp AGACTGCCAGTGAAGAACAAATCAATGCAAGGGCACTaGAGCTTGTCGTTCTTGGCGAAGGGACAACTCTAC +
Preference number: 6 (lower is better)
Translates to: RLPVKNKSMQGH*SLSFLAKGQLY
Trigger: GTAGAGTTGTCCCTTCGCCAAGAACGACAAGCTTCAGTGCCCTTGCATTGATTTGTTCTTCACTGGCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587731.1
CDS CCA 72 bp CTAGGCAAACCAGCAGCCTTTGCCGGTTCAGCCTTATaGACAAGATGTTGCTGGAGTAGCTGTAATTACAGA +
Preference number: 6 (lower is better)
Translates to: LGKPAAFAGSAL*TRCCWSSCNYR
Trigger: TCTGTAATTACAGCTACTCCAGCAACATCTTGTCCATAAGGCTGAACCGGCAAAGGCTGCTGGTTTGCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000586815.1
ENST00000589316.5
ENST00000589459.5
CDS CCA 72 bp CCTGAGGATCCAAATTGTACATATAAAGGTGTCCACTaGATGACGCAACTAGCAGCCGTGGCAACTTCTGGA +
Preference number: 6 (lower is better)
Translates to: PEDPNCTYKGVH*MTQLAAVATSG
Trigger: TCCAGAAGTTGCCACGGCTGCTAGTTGCGTCATCCAGTGGACACCTTTATATGTACAATTTGGATCCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000587731.1
ENST00000589316.5
ENST00000589459.5
ENST00000591744.1
CDS TCA 72 bp TTTCAGGGAGTTTCCATCATAAAGCACAATCTCCCCTaGAGTCAGGCTTCCAGGATAGGCCAGGTAAGAATT +
Preference number: 6 (lower is better)
Translates to: FQGVSIIKHNLP*SQASRIGQVRI
Trigger: AATTCTTACCTGGCCTATCCTGGAAGCCTGACTTCAGGGGAGATTGTGCTTTATGATGGAAACTCCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262139.10
ENST00000546360.5
ENST00000586815.1
ENST00000589316.5
ENST00000589459.5
ENST00000591494.5
CDS CAA 72 bp CTCTTAGATATTGGTTCCAATGAACCGATGCTCATCTaGGTTCCGACGTTAGATCTTGGTTCCGAGAACTGT +
Preference number: 6 (lower is better)
Translates to: LLDIGSNEPMLI*VPTLDLGSENC
Trigger: ACAGTTCTCGGAACCAAGATCTAACGTCGGAACCAAGATGAGCATCGGTTCATTGGAACCAATATCTAAGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591494.5
CDS TCA 72 bp GTAAAGGAAGGGAGAACTCTTAGATATTGGTTCCAATaGACCGATGCTCATCTTGGTTCCGACGTTAGATCT +
Preference number: 6 (lower is better)
Translates to: VKEGRTLRYWFQ*TDAHLGSDVRS
Trigger: AGATCTAACGTCGGAACCAAGATGAGCATCGGTTCATTGGAACCAATATCTAAGAGTTCTCCCTTCCTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591494.5
CDS TCA 72 bp CATCATATATCTAGGACACCTTCCAAAGGAAAAGCATaGAGAAGCCTGTGCTCAGCTCTGTGGGTTATTTAT +
Preference number: 6 (lower is better)
Translates to: HHISRTPSKGKA*RSLCSALWVIY
Trigger: ATAAATAACCCACAGAGCTGAGCACAGGCTTCTTCATGCTTTTCCTTTGGAAGGTGTCCTAGATATATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590402.1