RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WFDC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101443

Ensembl transcript IDs: ENST00000217425.9, ENST00000339946.7, ENST00000342873.7, ENST00000372676.8, ENST00000447118.5, ENST00000462062.5, ENST00000488143.1

Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGACACAGGACACCTTCCCACAGCCATTGCGGCAGCATTTCATCTaGCCAGGACACTGGCTGTCCACCTGGCACTGGTCCCGACAGAGG +
Preference number: 1 (lower is better)
Translates to: VTQDTFPQPLRQHFI*PGHWLSTWHWSRQR
Trigger: CCTCTGTCGGGACCAGTGCCAGGTGGACAGCCAGTGTCCTGGCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGTGTCCTGTGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR CCA 90 bp GGACACTGGCTGTCCACCTGGCACTGGTCCCGACAGAGGCCGAGCTaGGGAAAGTTAATGTTCACCTGGGGGCAGGAACCCTCCTTATCT +
Preference number: 1 (lower is better)
Translates to: GHWLSTWHWSRQRPS*GKLMFTWGQEPSLS
Trigger: AGATAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCGGGACCAGTGCCAGGTGGACAGCCAGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR CCA 90 bp TCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTaGGCTGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTC +
Preference number: 1 (lower is better)
Translates to: SAQEGIQSPEKGEGR*AGTRCRARQKLSLL
Trigger: GAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
3UTR TCA 90 bp TCCCCAGCTCGCGCTCACTCAATCCTTAGAGTGGAAGAGATTGACTaGAAGACGACGAAGGGCGATACAGTGTCCAGGGAGGATTCCTCA +
Preference number: 1 (lower is better)
Translates to: SPARAHSILRVEEID*KTTKGDTVSREDSS
Trigger: TGAGGAATCCTCCCTGGACACTGTATCGCCCTTCGTCGTCTTTCAGTCAATCTCTTCCACTCTAAGGATTGAGTGAGCGCGAGCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR CCA 90 bp TGGAGCTCAGAAATTGGGAGTGACACAGGACACCTTCCCACAGCCATTGCGGCACACTGGCTGTCCACCTaGCACTGGTCCCGACAGAGG +
Preference number: 2 (lower is better)
Translates to: WSSEIGSDTGHLPTAIAAHWLST*HWSRQR
Trigger: CCTCTGTCGGGACCAGTGCCAGGTGGACAGCCAGTG...TGCCGCAATGGCTGTGGGAAGGTGTCCTGTGTCACTCCCAATTTCTGAGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR CCA 90 bp ACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGGTGGTATCTGGCCAGGACACTaGCTGTCCACCTGGCACTGG +
Preference number: 2 (lower is better)
Translates to: TRCRARQKLSLLTAQPGGIWPGH*LSTWHW
Trigger: CCAGTGCCAGGTGGACAGCCAGTGTCCTGGCCAGAT...ACCACCAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR CAA 90 bp GGAGCTCAGAAATTGGGAGTGACACAGGACACCTTCCCACAGCCATaGCGGCAGCATTTCATCTGGCCAGGACACTGGCTGTCCACCTGG +
Preference number: 2 (lower is better)
Translates to: GAQKLGVTQDTFPQP*RQHFIWPGHWLSTW
Trigger: CCAGGTGGACAGCCAGTGTCCTGGCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGTGTCCTGTGTCACTCCCAATTTCTGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR TCA 90 bp ACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGGTGGTGTGGAAGAGATTGACTaGAAGACGACGAAGGGCGAT +
Preference number: 2 (lower is better)
Translates to: TRCRARQKLSLLTAQPGGVEEID*KTTKGD
Trigger: ATCGCCCTTCGTCGTCTTTCAGTCAATCTCTTCCAC...ACCACCAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR GCA 90 bp GAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGACTTTCTCTCCTCACTaGTCAGCCTGGTGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: EREKLWSAQEGIQSPEKGTFSPH*SAWWWL
Trigger: CAGCCACCACCAGGCTGAGCAGTGAGGAGAGAAAGT...CCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
3UTR-3UTR GCA 90 bp AAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAACTTTCTCTCCTCACTaGTCAGCCTGGTGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: KGEAVVSPRGNTESRKRGTFSPH*SAWWWL
Trigger: CAGCCACCACCAGGCTGAGCAGTGAGGAGAGAAAGT...TCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
3UTR CAA 90 bp GAGAGTCCCCAGCTCGCGCTCACTCAATCCTTAGAGTGGAAGAGATaGACTGAAAGACGACGAAGGGCGATACAGTGTCCAGGGAGGATT +
Preference number: 2 (lower is better)
Translates to: ESPQLALTQSLEWKR*TERRRRAIQCPGRI
Trigger: AATCCTCCCTGGACACTGTATCGCCCTTCGTCGTCTTTCAGTCAATCTCTTCCACTCTAAGGATTGAGTGAGCGCGAGCTGGGGACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR TCA 90 bp AAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGACTCAGAAATTGGGAGTaGCACAGGACACCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: KGEAVVSPRGNTESRKRGLRNWE*HRTPSH
Trigger: GTGGGAAGGTGTCCTGTGTCACTCCCAATTTCTGAG...TCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR GCA 90 bp GAACCCTCCTTATCTTTGAGAGAGTCCCCAGCTCGCGCTCACTCAATCCTTAGAACTTTCTCTCCTCACTaGTCAGCCTGGTGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: EPSLSLRESPARAHSILRTFSPH*SAWWWL
Trigger: CAGCCACCACCAGGCTGAGCAGTGAGGAGAGAAAGT...TCTAAGGATTGAGTGAGCGCGAGCTGGGGACTCTCTCAAAGATAAGGAGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR CCA 90 bp GTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAACGACAGAGGCCGAGCTaGGGAAAGTTAATGTTCACC +
Preference number: 2 (lower is better)
Translates to: VGKGRSCGQPKREYRVPKRQRPS*GKLMFT
Trigger: GGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCG...TTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR GCA 90 bp CTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGACTTTCTCTCCTCACTaGTCAGCCTGGTGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: LYWLGKGEAVVSPRGNTETFSPH*SAWWWL
Trigger: CAGCCACCACCAGGCTGAGCAGTGAGGAGAGAAAGT...CTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
3UTR-3UTR GCA 90 bp CTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTGGGCTGGAACCAGATaGAGGGCCAGGCAGAAACTT +
Preference number: 2 (lower is better)
Translates to: LYWLGKGEAVVSPRGNTEWAGTR*RARQKL
Trigger: AAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCA...CTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
3UTR-3UTR CCA 90 bp GCTCAGAAATTGGGAGTGACACAGGACACCTTCCCACAGCCATTGCGGCAGCATAAGTTAATGTTCACCTaGGGGCAGGAACCCTCCTTA +
Preference number: 2 (lower is better)
Translates to: AQKLGVTQDTFPQPLRQHKLMFT*GQEPSL
Trigger: TAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTT...ATGCTGCCGCAATGGCTGTGGGAAGGTGTCCTGTGTCACTCCCAATTTCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR CCA 90 bp ACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGACACTGCTCAGCCTGGTaGTGGCTGGAGCTCAGAAAT +
Preference number: 2 (lower is better)
Translates to: TLLVGKGRSCGQPKREYRHCSAW*WLELRN
Trigger: ATTTCTGAGCTCCAGCCACCACCAGGCTGAGCAGTG...TCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR CCA 90 bp GTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAGGTTACTTTATTGGTTaGGAAAGGGAGAAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: VGKGRSCGQPKREYRVPKGYFIG*EREKLW
Trigger: CCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACC...TTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
3UTR-3UTR CCA 90 bp GCTGAAAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGGTTACTTTATTGGTTaGGAAAGGGAGAAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: AESGYFIGWEREKLWSAQGYFIG*EREKLW
Trigger: CCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACC...TTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
3UTR CCA 72 bp CTGTCCACCTGGCACTGGTCCCGACAGAGGCCGAGCTaGGGAAAGTTAATGTTCACCTGGGGGCAGGAACCC +
Preference number: 3 (lower is better)
Translates to: LSTWHWSRQRPS*GKLMFTWGQEP
Trigger: GGGTTCCTGCCCCCAGGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCGGGACCAGTGCCAGGTGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR CCA 72 bp GACACCTTCCCACAGCCATTGCGGCAGCATTTCATCTaGCCAGGACACTGGCTGTCCACCTGGCACTGGTCC +
Preference number: 3 (lower is better)
Translates to: DTFPQPLRQHFI*PGHWLSTWHWS
Trigger: GGACCAGTGCCAGGTGGACAGCCAGTGTCCTGGCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR CCA 72 bp GAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTaGGCTGGAACCAGATGCAGGGCCAGGCAGAAACTT +
Preference number: 3 (lower is better)
Translates to: EGIQSPEKGEGR*AGTRCRARQKL
Trigger: AAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
3UTR CCA 72 bp CGACAGAGGCCGAGCTGGGGAAAGTTAATGTTCACCTaGGGGCAGGAACCCTCCTTATCTTTGAGAGAGTCC +
Preference number: 3 (lower is better)
Translates to: RQRPSWGKLMFT*GQEPSLSLRES
Trigger: GGACTCTCTCAAAGATAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR CAA 90 bp GGGAGTGACACAGGACACCTTCCCACAGCCATTGCGGCAGCATTTCATCTGGCCTTAGAGTGGAAGAGATaGACTGAAAGACGACGAAGG +
Preference number: 3 (lower is better)
Translates to: GSDTGHLPTAIAAAFHLALEWKR*TERRRR
Trigger: CCTTCGTCGTCTTTCAGTCAATCTCTTCCACTCTAA...GGCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGTGTCCTGTGTCACTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR TCA 72 bp CGCGCTCACTCAATCCTTAGAGTGGAAGAGATTGACTaGAAGACGACGAAGGGCGATACAGTGTCCAGGGAG +
Preference number: 3 (lower is better)
Translates to: RAHSILRVEEID*KTTKGDTVSRE
Trigger: CTCCCTGGACACTGTATCGCCCTTCGTCGTCTTTCAGTCAATCTCTTCCACTCTAAGGATTGAGTGAGCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR-3UTR CAA 90 bp AAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAAAAGTGGTTACTTTATaGGTTGGGAAAGGGAGAAGC +
Preference number: 3 (lower is better)
Translates to: KGEAVVSPRGNTESRKRGKVVTL*VGKGRS
Trigger: GCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTT...TCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
3UTR CCA 72 bp AGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTaGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAA +
Preference number: 3 (lower is better)
Translates to: SGYFIGWEREKL*SAQEGIQSPEK
Trigger: TTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR TCA 90 bp TGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTGGGCTCGAACAGCAGCAGGCTaGGGAGGAGGGCGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: WSAQEGIQSPEKGEGRWARTAAG*GGGRRL
Trigger: TAGCCGCCGCCCTCCTCCTCAGCCTGCTGCTGTTCG...AGCCCACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339946.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR TCA 90 bp GGGAGTGACACAGGACACCTTCCCACAGCCATTGCGGCAGCATTTCATCTGGCCCGAACAGCAGCAGGCTaGGGAGGAGGGCGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: GSDTGHLPTAIAAAFHLARTAAG*GGGRRL
Trigger: TAGCCGCCGCCCTCCTCCTCAGCCTGCTGCTGTTCG...GGCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGTGTCCTGTGTCACTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR TCA 90 bp TGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTGGGCTCCGCGCTGCAGCACTTaGGGTTGTCGGCGCATTCGC +
Preference number: 4 (lower is better)
Translates to: WSAQEGIQSPEKGEGRWAPRCST*GCRRIR
Trigger: GCGAATGCGCCGACAACCTCAAGTGCTGCAGCGCGG...AGCCCACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp GGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGGTGCAGGCATGGTGCTATaGCCGGGCGGGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GTRCRARQKLSLLTAQPGAGMVL*PGGVQV
Trigger: CACCTGCACCCCGCCCGGGCATAGCACCATGCCTGC...ACCAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372676.8
CDS-3UTR CCA 90 bp GAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCGGCGACAAGCAGGCATaGTGCTATGCCCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: EKLWSAQEGIQSPEKGEGGDKQA*CYARAG
Trigger: CCCCGCCCGGGCATAGCACCATGCCTGCTTGTCGCC...GCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339946.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR TCA 90 bp GAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCCCGCGCTGCAGCACTTaGGGTTGTCGGCGCATTCGC +
Preference number: 4 (lower is better)
Translates to: EKLWSAQEGIQSPEKGEGPRCST*GCRRIR
Trigger: GCGAATGCGCCGACAACCTCAAGTGCTGCAGCGCGG...GCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp ACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGGTGGTGACAAGCAGGCATGGTaGTATGCCCGGGCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TRCRARQKLSLLTAQPGGDKQAW*YARAGC
Trigger: GCACCCCGCCCGGGCATAGCACCATGCCTGCTTGTC...ACCACCAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339946.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGCTGTCCACCTGGCACTaGTCCCGACAGAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: EAVVSPRGNTESRKRGGQLSTWH*SRQRPS
Trigger: GCTCGGCCTCTGTCGGGACCAGTGCCAGGTGGACAG...CTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp ACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGGTGGTCTGTCCACCTGGCACTaGTCCCGACAGAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: TRCRARQKLSLLTAQPGGLSTWH*SRQRPS
Trigger: GCTCGGCCTCTGTCGGGACCAGTGCCAGGTGGACAG...ACCACCAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR TCA 90 bp GGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGCGAACAGCAGCAGGCTaGGGAGGAGGGCGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: GKGRSCGQPKREYRVPKKRTAAG*GGGRRL
Trigger: TAGCCGCCGCCCTCCTCCTCAGCCTGCTGCTGTTCG...CTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339946.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp TGGAGCTCAGAAATTGGGAGTGACACAGGACACCTTCCCACAGCCATTGCGGCAGACAAGCAGGCATGGTaGTATGCCCGGGCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: WSSEIGSDTGHLPTAIAADKQAW*YARAGC
Trigger: GCACCCCGCCCGGGCATAGCACCATGCCTGCTTGTC...TGCCGCAATGGCTGTGGGAAGGTGTCCTGTGTCACTCCCAATTTCTGAGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR CCA 90 bp GAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGGCGACAAGCAGGCATaGTGCTATGCCCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: EREKLWSAQEGIQSPEKGGDKQA*CYARAG
Trigger: CCCCGCCCGGGCATAGCACCATGCCTGCTTGTCGCC...CCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339946.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp TGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTGGGCTTCTTGCGTGCAGTTCTaGTCAGCCTGGAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: WSAQEGIQSPEKGEGRWASCVQF*SAWSSG
Trigger: CCCCGAGCTCCAGGCTGACCAGAACTGCACGCAAGA...AGCCCACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp TTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGCTGTCCACCTGGCACTaGTCCCGACAGAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LVGKGRSCGQPKREYRVPLSTWH*SRQRPS
Trigger: GCTCGGCCTCTGTCGGGACCAGTGCCAGGTGGACAG...CGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GGGAGTGACACAGGACACCTTCCCACAGCCATTGCGGCAGCATTTCATCTGGCCATCTGGCCAGGACACTaGCTGTCCACCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GSDTGHLPTAIAAAFHLAIWPGH*LSTWHW
Trigger: CCAGTGCCAGGTGGACAGCCAGTGTCCTGGCCAGAT...GGCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGTGTCCTGTGTCACTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR TCA 90 bp TTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGTCCATCTTGGGCACCTaGGCTGCTCTCAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LVGKGRSCGQPKREYRVPSILGT*AALRRP
Trigger: GGGCCTCCTGAGAGCAGCTCAGGTGCCCAAGATGGA...CGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR GCA 90 bp AAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGGACAAGCAGGCATGGTaGTATGCCCGGGCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: KGRSCGQPKREYRVPKKGDKQAW*YARAGC
Trigger: GCACCCCGCCCGGGCATAGCACCATGCCTGCTTGTC...CCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339946.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp AGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTATCTGGCCAGGACACTaGCTGTCCACCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SCGQPKREYRVPKKGRAGIWPGH*LSTWHW
Trigger: CCAGTGCCAGGTGGACAGCCAGTGTCCTGGCCAGAT...ACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCATCTGGCCAGGACACTaGCTGTCCACCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: EKLWSAQEGIQSPEKGEGIWPGH*LSTWHW
Trigger: CCAGTGCCAGGTGGACAGCCAGTGTCCTGGCCAGAT...GCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCCCTCACTGCTCAGCCTaGTGGTGGCTGGAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: EKLWSAQEGIQSPEKGEGPHCSA*WWLELR
Trigger: TCTGAGCTCCAGCCACCACCAGGCTGAGCAGTGAGG...GCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR TCA 90 bp TTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGTGCCTGAGACTAGGGTaGAGCCGAACAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LVGKGRSCGQPKREYRVPCLRLG*SRTAAG
Trigger: GCCTGCTGCTGTTCGGCTTCACCCTAGTCTCAGGCA...CGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR TCA 90 bp AAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGGCAGAGCTGCCTGCCTaGGTCCATCTTGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: KGRSCGQPKREYRVPKKGAELPA*VHLGHL
Trigger: CAGGTGCCCAAGATGGACTCAGGCAGGCAGCTCTGC...CCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR GCA 90 bp AGGTGGGCTGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTTCCGAGACGCACTCTTaGGTGCAGTTCTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RWAGTRCRARQKLSLLTASETHS*VQFWSA
Trigger: GGCTGACCAGAACTGCACGCAAGAGTGCGTCTCGGA...AGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp AAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTCCGAGACGCACTCTTaGGTGCAGTTCTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: KLWSAQEGIQSPEKGEGRSETHS*VQFWSA
Trigger: GGCTGACCAGAACTGCACGCAAGAGTGCGTCTCGGA...CCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGCACTGGCTGTCCACCTaGCACTGGTCCCGACAGAGG +
Preference number: 4 (lower is better)
Translates to: GKGRSCGQPKREYRVPKKHWLST*HWSRQR
Trigger: CCTCTGTCGGGACCAGTGCCAGGTGGACAGCCAGTG...CTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTGCAGCCTGGTGGTGGCTaGAGCTCAGAAATTGGGAGT +
Preference number: 4 (lower is better)
Translates to: AVVSPRGNTESRKRGGQVQPGGG*SSEIGS
Trigger: ACTCCCAATTTCTGAGCTCCAGCCACCACCAGGCTG...CACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GGTGGGCTGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCCACTGCTCAGCCTGGTaGTGGCTGGAGCTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: GGLEPDAGPGRNFLSSLLHCSAW*WLELRN
Trigger: ATTTCTGAGCTCCAGCCACCACCAGGCTGAGCAGTG...GAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR TCA 90 bp AGGACACCTTCCCACAGCCATTGCGGCAGCATTTCATCTGGCCAGGACACTGGCCTCAGAAATTGGGAGTaGCACAGGACACCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RTPSHSHCGSISSGQDTGLRNWE*HRTPSH
Trigger: GTGGGAAGGTGTCCTGTGTCACTCCCAATTTCTGAG...GCCAGTGTCCTGGCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR GCA 90 bp CTGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGAGACGCACTCTTGCGTaGAGTTCTGGTCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LEPDAGPGRNFLSSLLSLRRTLA*SSGQPG
Trigger: TCCAGGCTGACCAGAACTGCACGCAAGAGTGCGTCT...CAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp AGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTCCCAGGAAGATCACCTaGAAATCCCTCCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SCGQPKREYRVPKKGRAGPRKIT*KSLLLL
Trigger: GAGCAGGAGGAGGGATTTGCAGGTGATCTTCCTGGG...ACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR GCA 90 bp GCTGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTCCTTCCCACAGCCATTaGGGCAGCATTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: AGTRCRARQKLSLLTAQPPSHSH*GSISSG
Trigger: GCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGG...AGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp GAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCCCTTCCCACAGCCATTaGGGCAGCATTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: EKLWSAQEGIQSPEKGEGPSHSH*GSISSG
Trigger: GCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGG...GCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp AGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTACTTTCTCTCCTCACTaGTCAGCCTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SCGQPKREYRVPKKGRAGTFSPH*SAWWWL
Trigger: CAGCCACCACCAGGCTGAGCAGTGAGGAGAGAAAGT...ACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp ACACCTTCCCACAGCCATTGCGGCAGCATTTCATCTGGCCAGGACACTGGCTGTACTTTCTCTCCTCACTaGTCAGCCTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TPSHSHCGSISSGQDTGCTFSPH*SAWWWL
Trigger: CAGCCACCACCAGGCTGAGCAGTGAGGAGAGAAAGT...ACAGCCAGTGTCCTGGCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR GCA 90 bp GAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGTGGGCTGGAACCAGATaGAGGGCCAGGCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: EAVVSPRGNTESRKRGGQWAGTR*RARQKL
Trigger: AAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCA...CTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATAGGCGACAAGCAGGCATaGTGCTATGCCCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GYFIGWEREKLWSAQEGIGDKQA*CYARAG
Trigger: CCCCGCCCGGGCATAGCACCATGCCTGCTTGTCGCC...TATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339946.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTGCGACAGAGGCCGAGCTaGGGAAAGTTAATGTTCACC +
Preference number: 4 (lower is better)
Translates to: AVVSPRGNTESRKRGGQVRQRPS*GKLMFT
Trigger: GGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCG...CACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GAGAGTCCCCAGCTCGCGCTCACTCAATCCTTAGAGTGGAAGAGATTGACTGAACACTGGCTGTCCACCTaGCACTGGTCCCGACAGAGG +
Preference number: 4 (lower is better)
Translates to: ESPQLALTQSLEWKRLTEHWLST*HWSRQR
Trigger: CCTCTGTCGGGACCAGTGCCAGGTGGACAGCCAGTG...TTCAGTCAATCTCTTCCACTCTAAGGATTGAGTGAGCGCGAGCTGGGGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR CCA 90 bp TGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGGCAGCCTGGTGGTGGCTaGAGCTCAGAAATTGGGAGT +
Preference number: 4 (lower is better)
Translates to: WNQMQGQAETFSPHCSAWQPGGG*SSEIGS
Trigger: ACTCCCAATTTCTGAGCTCCAGCCACCACCAGGCTG...CCAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp ACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGGTGGTCAGCCTGGTGGTGGCTaGAGCTCAGAAATTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TRCRARQKLSLLTAQPGGQPGGG*SSEIGS
Trigger: ACTCCCAATTTCTGAGCTCCAGCCACCACCAGGCTG...ACCACCAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp AAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGCCTCACTGCTCAGCCTaGTGGTGGCTGGAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: KGRSCGQPKREYRVPKKGPHCSA*WWLELR
Trigger: TCTGAGCTCCAGCCACCACCAGGCTGAGCAGTGAGG...CCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAACCTCACTGCTCAGCCTaGTGGTGGCTGGAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VGKGRSCGQPKREYRVPKPHCSA*WWLELR
Trigger: TCTGAGCTCCAGCCACCACCAGGCTGAGCAGTGAGG...TTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp GGGCTGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCGCAAATCCCTCCTCCTaGTCCCAAATGGAATCACAG +
Preference number: 4 (lower is better)
Translates to: GLEPDAGPGRNFLSSLLSANPSS*SQMESQ
Trigger: CTGTGATTCCATTTGGGAGCAGGAGGAGGGATTTGC...GCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR GCA 90 bp TTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGACTTTCTCTCCTCACTaGTCAGCCTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LVGKGRSCGQPKREYRVPTFSPH*SAWWWL
Trigger: CAGCCACCACCAGGCTGAGCAGTGAGGAGAGAAAGT...CGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp GGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAATGGGCTGGAACCAGATaGAGGGCCAGGCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: GWEREKLWSAQEGIQSPEWAGTR*RARQKL
Trigger: AAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCA...TTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp AGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTCCTCCTGCTCCCAAATaGAATCACAGGACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SCGQPKREYRVPKKGRAGPPAPK*NHRTSA
Trigger: AGCTGAGGTCCTGTGATTCCATTTGGGAGCAGGAGG...ACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR CCA 90 bp TGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGATGCCTGAGTCCATCTTaGGCACCTGAGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: WLGKGEAVVSPRGNTESRCLSPS*APELLS
Trigger: TGAGAGCAGCTCAGGTGCCCAAGATGGACTCAGGCA...TCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR CCA 90 bp AAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGACCCACTGCCCCTCACTaGGCTTCACATACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KGEAVVSPRGNTESRKRGPTAPH*ASHTAE
Trigger: CTCTGCTGTATGTGAAGCCCAGTGAGGGGCAGTGGG...TCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR CCA 90 bp GAAAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGCTGTCCACCTGGCACTaGTCCCGACAGAGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: ESGYFIGWEREKLWSAQELSTWH*SRQRPS
Trigger: GCTCGGCCTCTGTCGGGACCAGTGCCAGGTGGACAG...CTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
3UTR CAA 72 bp AAATTGGGAGTGACACAGGACACCTTCCCACAGCCATaGCGGCAGCATTTCATCTGGCCAGGACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: KLGVTQDTFPQP*RQHFIWPGHWL
Trigger: CAGCCAGTGTCCTGGCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGTGTCCTGTGTCACTCCCAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR GCA 90 bp TTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCTTGGGCACCTGAGCTaGTCTCAGGAGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LLVGKGRSCGQPKREYRVLGHLS*SQEAQE
Trigger: TTCCTGGGCCTCCTGAGAGCAGCTCAGGTGCCCAAG...GACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR GCA 90 bp GAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGCCTTCCCACAGCCATTaGGGCAGCATTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: EREKLWSAQEGIQSPEKGPSHSH*GSISSG
Trigger: GCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGG...CCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GAAAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGCACTGGCTGTCCACCTaGCACTGGTCCCGACAGAGG +
Preference number: 4 (lower is better)
Translates to: ESGYFIGWEREKLWSAQEHWLST*HWSRQR
Trigger: CCTCTGTCGGGACCAGTGCCAGGTGGACAGCCAGTG...CTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp ACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGACACTGGCTGTCCACCTaGCACTGGTCCCGACAGAGG +
Preference number: 4 (lower is better)
Translates to: TLLVGKGRSCGQPKREYRHWLST*HWSRQR
Trigger: CCTCTGTCGGGACCAGTGCCAGGTGGACAGCCAGTG...TCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp TTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCATCTGGCCAGGACACTaGCTGTCCACCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: LLVGKGRSCGQPKREYRVIWPGH*LSTWHW
Trigger: CCAGTGCCAGGTGGACAGCCAGTGTCCTGGCCAGAT...GACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAACACTGCTCAGCCTGGTaGTGGCTGGAGCTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: VGKGRSCGQPKREYRVPKHCSAW*WLELRN
Trigger: ATTTCTGAGCTCCAGCCACCACCAGGCTGAGCAGTG...TTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp TGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGGGAAAGGGAGAAGCTGTaGTCAGCCCAAGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: WNQMQGQAETFSPHCSAWEREKL*SAQEGI
Trigger: TATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTC...CCAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp AGGTGGGCTGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTGAAAGGGAGAAGCTGTaGTCAGCCCAAGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: RWAGTRCRARQKLSLLTAEREKL*SAQEGI
Trigger: TATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTC...AGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGGTGAAAGGGAGAAGCTGTaGTCAGCCCAAGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: GTRCRARQKLSLLTAQPGEREKL*SAQEGI
Trigger: TATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTC...ACCAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR TCA 90 bp GGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATATGCCTGAGACTAGGGTaGAGCCGAACAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GYFIGWEREKLWSAQEGICLRLG*SRTAAG
Trigger: GCCTGCTGCTGTTCGGCTTCACCCTAGTCTCAGGCA...TATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR TCA 90 bp GAGAGTCCCCAGCTCGCGCTCACTCAATCCTTAGAGTGGAAGAGATTGACTGAAAACCCTCCTTATCTTTaGGAGAGTCCCCAGCTCGCG +
Preference number: 4 (lower is better)
Translates to: ESPQLALTQSLEWKRLTENPPYL*ESPQLA
Trigger: CGCGAGCTGGGGACTCTCTCAAAGATAAGGAGGGTT...TTCAGTCAATCTCTTCCACTCTAAGGATTGAGTGAGCGCGAGCTGGGGACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR GCA 90 bp TGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAAGACGCACTCTTGCGTaGAGTTCTGGTCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: WEREKLWSAQEGIQSPEKRRTLA*SSGQPG
Trigger: TCCAGGCTGACCAGAACTGCACGCAAGAGTGCGTCT...TTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp TGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAACCTTCCCACAGCCATTaGGGCAGCATTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: WEREKLWSAQEGIQSPEKPSHSH*GSISSG
Trigger: GCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGG...TTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp TATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCTGGGCTGGAACCAGATaGAGGGCCAGGCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: YWLGKGEAVVSPRGNTESWAGTR*RARQKL
Trigger: AAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCA...GGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp GAGAGTCCCCAGCTCGCGCTCACTCAATCCTTAGAGTGGAAGAGATTGACTGAATGGGCTGGAACCAGATaGAGGGCCAGGCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: ESPQLALTQSLEWKRLTEWAGTR*RARQKL
Trigger: AAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCA...TTCAGTCAATCTCTTCCACTCTAAGGATTGAGTGAGCGCGAGCTGGGGACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR CCA 90 bp ACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGATCTTGCGTGCAGTTCTaGTCAGCCTGGAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TLLVGKGRSCGQPKREYRSCVQF*SAWSSG
Trigger: CCCCGAGCTCCAGGCTGACCAGAACTGCACGCAAGA...TCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp AGGTGGGCTGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTAAGTTAATGTTCACCTaGGGGCAGGAACCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: RWAGTRCRARQKLSLLTAKLMFT*GQEPSL
Trigger: TAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTT...AGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGAAGTTAATGTTCACCTaGGGGCAGGAACCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: EAVVSPRGNTESRKRGGQKLMFT*GQEPSL
Trigger: TAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTT...CTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp TATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCACTGCTCAGCCTGGTaGTGGCTGGAGCTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: YWLGKGEAVVSPRGNTESHCSAW*WLELRN
Trigger: ATTTCTGAGCTCCAGCCACCACCAGGCTGAGCAGTG...GGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp AGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGAAAGGGAGAAGCTGTaGTCAGCCCAAGAGGGAATA +
Preference number: 4 (lower is better)
Translates to: RSCGQPKREYRVPKKGRAEREKL*SAQEGI
Trigger: TATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTC...TGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp AAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGCAGCCAGTTGGCCATTaGGCAGAGAGCAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KWLLYWLGKGEAVVSPRGQPVGH*AESRRW
Trigger: CCACCTTCTGCTCTCTGCCCAATGGCCAACTGGCTG...CCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR TCA 90 bp GAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGTGGAAGAGATTGACTaGAAGACGACGAAGGGCGAT +
Preference number: 4 (lower is better)
Translates to: EREKLWSAQEGIQSPEKGVEEID*KTTKGD
Trigger: ATCGCCCTTCGTCGTCTTTCAGTCAATCTCTTCCAC...CCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR CCA 90 bp GAAAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGCCAAGTGGGCCTTCGTaGCCTAGGGCCAGAAATCTC +
Preference number: 4 (lower is better)
Translates to: ESGYFIGWEREKLWSAQEPSGPS*PRARNL
Trigger: GAGATTTCTGGCCCTAGGCCACGAAGGCCCACTTGG...CTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR CCA 90 bp AGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAAAGTTAATGTTCACCTaGGGGCAGGAACCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: RSCGQPKREYRVPKKGRAKLMFT*GQEPSL
Trigger: TAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTT...TGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp AAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGCAGCCTGGTGGTGGCTaGAGCTCAGAAATTGGGAGT +
Preference number: 4 (lower is better)
Translates to: KWLLYWLGKGEAVVSPRGQPGGG*SSEIGS
Trigger: ACTCCCAATTTCTGAGCTCCAGCCACCACCAGGCTG...CCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp CTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGCACTGCTCAGCCTGGTaGTGGCTGGAGCTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: LYWLGKGEAVVSPRGNTEHCSAW*WLELRN
Trigger: ATTTCTGAGCTCCAGCCACCACCAGGCTGAGCAGTG...CTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp AGGTGGGCTGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTGGTTACTTTATTGGTTaGGAAAGGGAGAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RWAGTRCRARQKLSLLTAGYFIG*EREKLW
Trigger: CCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACC...AGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp ACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGGTGGTGGTTACTTTATTGGTTaGGAAAGGGAGAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TRCRARQKLSLLTAQPGGGYFIG*EREKLW
Trigger: CCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACC...ACCACCAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAACCCTCCTTATCATTaGGCAGAGAGCAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VGKGRSCGQPKREYRVPKNPPYH*AESRRW
Trigger: CCACCTTCTGCTCTCTGCCCAATGATAAGGAGGGTT...TTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372676.8
CDS-3UTR TCA 90 bp AAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGCTCAGAAATTGGGAGTaGCACAGGACACCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KWLLYWLGKGEAVVSPRGLRNWE*HRTPSH
Trigger: GTGGGAAGGTGTCCTGTGTCACTCCCAATTTCTGAG...CCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR GCA 90 bp GCTGAAAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAACTTTCTCTCCTCACTaGTCAGCCTGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AESGYFIGWEREKLWSAQTFSPH*SAWWWL
Trigger: CAGCCACCACCAGGCTGAGCAGTGAGGAGAGAAAGT...TTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp AGGTGGGCTGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTGTCTTTAGGTGCCAGTaGAACAGTGCTAATTACAAC +
Preference number: 4 (lower is better)
Translates to: RWAGTRCRARQKLSLLTAVFRCQ*NSANYN
Trigger: GTTGTAATTAGCACTGTTCCACTGGCACCTAAAGAC...AGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR CCA 90 bp AGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTTACTTTATTGGTTaGGAAAGGGAGAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RSCGQPKREYRVPKKGRAGYFIG*EREKLW
Trigger: CCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACC...TGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp CTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGAATCACTCAGCCAGTTaGCCATTGGGCAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LYWLGKGEAVVSPRGNTENHSAS*PLGREQ
Trigger: CTGCTCTCTGCCCAATGGCCAACTGGCTGAGTGATT...CTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
3UTR CAA 72 bp CAGCTCGCGCTCACTCAATCCTTAGAGTGGAAGAGATaGACTGAAAGACGACGAAGGGCGATACAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QLALTQSLEWKR*TERRRRAIQCP
Trigger: TGGACACTGTATCGCCCTTCGTCGTCTTTCAGTCAATCTCTTCCACTCTAAGGATTGAGTGAGCGCGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR TCA 90 bp ACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGACTCAGAAATTGGGAGTaGCACAGGACACCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TLLVGKGRSCGQPKREYRLRNWE*HRTPSH
Trigger: GTGGGAAGGTGTCCTGTGTCACTCCCAATTTCTGAG...TCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR TCA 90 bp GAAAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGCTCAGAAATTGGGAGTaGCACAGGACACCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: ESGYFIGWEREKLWSAQELRNWE*HRTPSH
Trigger: GTGGGAAGGTGTCCTGTGTCACTCCCAATTTCTGAG...CTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATAAGGAGTAAGGGTAAGTaGGCAGAGGCGATACAGGGA +
Preference number: 4 (lower is better)
Translates to: GYFIGWEREKLWSAQEGIRSKGK*AEAIQG
Trigger: TCCCTGTATCGCCTCTGCCCACTTACCCTTACTCCT...TATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR CCA 90 bp GAAAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGCGACAGAGGCCGAGCTaGGGAAAGTTAATGTTCACC +
Preference number: 4 (lower is better)
Translates to: ESGYFIGWEREKLWSAQERQRPS*GKLMFT
Trigger: GGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCG...CTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp GCTGAAAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAACGACAGAGGCCGAGCTaGGGAAAGTTAATGTTCACC +
Preference number: 4 (lower is better)
Translates to: AESGYFIGWEREKLWSAQRQRPS*GKLMFT
Trigger: GGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCG...TTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR TCA 90 bp GTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAACATAGGGTTGTTGTaGAAGCAGTGGGAAACAAAC +
Preference number: 4 (lower is better)
Translates to: VGKGRSCGQPKREYRVPKNIGLL*KQWETN
Trigger: GTTTGTTTCCCACTGCTTTCACAACAACCCTATGTT...TTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR CCA 90 bp AAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAAGTTAATGTTCACCTaGGGGCAGGAACCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: KWLLYWLGKGEAVVSPRGKLMFT*GQEPSL
Trigger: TAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTT...CCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CCA 90 bp ACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGGAACCCTCCTTATCTaGGTAGAAAAAGGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: TLLVGKGRSCGQPKREYRGTLLI*VEKGVR
Trigger: CCTTACTCCTTTTTCTACCCAGATAAGGAGGGTTCC...TCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR CCA 90 bp GGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATAGGTTACTTTATTGGTTaGGAAAGGGAGAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GYFIGWEREKLWSAQEGIGYFIG*EREKLW
Trigger: CCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACC...TATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS GCA 90 bp CAGCACTTGAGGTTGTCGGCGCATTCGCTGTCCGAGACGCACTCTTaGGTGCAGTTCTGGTCAGCCTGGAGCTCGGGGCACACGCCAGTC +
Preference number: 5 (lower is better)
Translates to: QHLRLSAHSLSETHS*VQFWSAWSSGHTPV
Trigger: GACTGGCGTGTGCCCCGAGCTCCAGGCTGACCAGAACTGCACGCAAGAGTGCGTCTCGGACAGCGAATGCGCCGACAACCTCAAGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217425.9
ENST00000372676.8
ENST00000447118.5
CDS CCA 90 bp TTGTCGGCGCATTCGCTGTCCGAGACGCACTCTTGCGTGCAGTTCTaGTCAGCCTGGAGCTCGGGGCACACGCCAGTCTTCTCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: LSAHSLSETHSCVQF*SAWSSGHTPVFSAP
Trigger: AGGAGCAGAGAAGACTGGCGTGTGCCCCGAGCTCCAGGCTGACCAGAACTGCACGCAAGAGTGCGTCTCGGACAGCGAATGCGCCGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217425.9
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CAA 90 bp GCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTGCCCGCGCTGCAGCACTaGAGGTTGTCGGCGCATTCG +
Preference number: 5 (lower is better)
Translates to: AVVSPRGNTESRKRGGQVPALQH*RLSAHS
Trigger: CGAATGCGCCGACAACCTCAAGTGCTGCAGCGCGGG...CACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS CCA 90 bp GGACACTGGCTGTCCACCTGGCACTGGTCCCGACAGAGGCCGAGCTaGGGAAAGTTAATGTTCACCTGGGGGCAGGAACCCTCCTTATCA +
Preference number: 5 (lower is better)
Translates to: GHWLSTWHWSRQRPS*GKLMFTWGQEPSLS
Trigger: TGATAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCGGGACCAGTGCCAGGTGGACAGCCAGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372676.8
CDS CCA 90 bp CACTGGTCCCGACAGAGGCCGAGCTGGGGAAAGTTAATGTTCACCTaGGGGCAGGAACCCTCCTTATCTGCAAATCCCTCCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HWSRQRPSWGKLMFT*GQEPSLSANPSSCS
Trigger: GGAGCAGGAGGAGGGATTTGCAGATAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCGGGACCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488143.1
CDS-3UTR CAA 90 bp AGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGTCTGCAGCACTTGAGGTaGTCGGCGCATTCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SCGQPKREYRVPKKGRAGLQHLR*SAHSLS
Trigger: GGACAGCGAATGCGCCGACAACCTCAAGTGCTGCAG...ACCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CAA 90 bp AAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGCTGCAGCACTTGAGGTaGTCGGCGCATTCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: KLWSAQEGIQSPEKGEGRLQHLR*SAHSLS
Trigger: GGACAGCGAATGCGCCGACAACCTCAAGTGCTGCAG...CCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS CCA 90 bp CACTGGTCCCGACAGAGGCCGAGCTGGGGAAAGTTAATGTTCACCTaGGGGCAGGAACCCTCCTTATCTGAGACTAGGGTGAAGCCGAAC +
Preference number: 5 (lower is better)
Translates to: HWSRQRPSWGKLMFT*GQEPSLSETRVKPN
Trigger: GTTCGGCTTCACCCTAGTCTCAGATAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCGGGACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339946.7
CDS-3UTR CAA 90 bp GGGAGTGACACAGGACACCTTCCCACAGCCATTGCGGCAGCATTTCATCTGGCCGAACCCTCCTTATCTTaGAGAGAGTCCCCAGCTCGC +
Preference number: 5 (lower is better)
Translates to: GSDTGHLPTAIAAAFHLAEPSLS*RESPAR
Trigger: GCGAGCTGGGGACTCTCTCAAAGATAAGGAGGGTTC...GGCCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGTGTCCTGTGTCACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS TCA 90 bp CAAATCCCTCCTCCTGCTCCCAAATGGAATCACAGGACCTCAGCTTaGGTCCCAAGTGGGCCTTCGTGGCCTAGGGCCAGAAATCTCCCA +
Preference number: 5 (lower is better)
Translates to: QIPPPAPKWNHRTSA*VPSGPSWPRARNLP
Trigger: TGGGAGATTTCTGGCCCTAGGCCACGAAGGCCCACTTGGGACTCAAGCTGAGGTCCTGTGATTCCATTTGGGAGCAGGAGGAGGGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342873.7
ENST00000488143.1
CDS-3UTR CAA 90 bp AAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGGGGAGGGCAGGACCTTCCCACAGCCATaGCGGCAGCATTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: KLWSAQEGIQSPEKGEGRTFPQP*RQHFIW
Trigger: CCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGT...CCTGCCCTCCCCTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CAA 90 bp GGGCTGGAACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCGAACCCTCCTTATCATaGGGCAGAGAGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GLEPDAGPGRNFLSSLLSEPSLS*GREQKV
Trigger: CACCTTCTGCTCTCTGCCCAATGATAAGGAGGGTTC...GCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGTTCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372676.8
CDS-3UTR CAA 90 bp TATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCGTCCGAGACGCACTCTaGCGTGCAGTTCTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: YWLGKGEAVVSPRGNTESVRDAL*RAVLVS
Trigger: GCTGACCAGAACTGCACGCAAGAGTGCGTCTCGGAC...GGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CAA 90 bp GGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAACCTTCCCACAGCCATaGCGGCAGCATTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: GWEREKLWSAQEGIQSPETFPQP*RQHFIW
Trigger: CCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGT...TTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CAA 90 bp TGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGATACAGGGAGATTAACTaGTACCTGCAGCATGGCCCC +
Preference number: 5 (lower is better)
Translates to: WLGKGEAVVSPRGNTESRYREIN*YLQHGP
Trigger: GGGGCCATGCTGCAGGTACAAGTTAATCTCCCTGTA...TCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS GCA 90 bp CTGGGGAAAGTTAATGTTCACCTGGGGGCAGGAACCCTCCTTATCTaGAAATCCCTCCTCCTGCTCCCAAATGGAATCACAGGACCTCAG +
Preference number: 5 (lower is better)
Translates to: LGKVNVHLGAGTLLI*KSLLLLPNGITGPQ
Trigger: CTGAGGTCCTGTGATTCCATTTGGGAGCAGGAGGAGGGATTTGCAGATAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTTTCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488143.1
CDS-3UTR CAA 90 bp CTGAAAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGGTCCGAGACGCACTCTaGCGTGCAGTTCTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LKVVTLLVGKGRSCGQPKVRDAL*RAVLVS
Trigger: GCTGACCAGAACTGCACGCAAGAGTGCGTCTCGGAC...CTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CAA 90 bp TTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCTCACAGGACCTCAGCTaGAGTCCCAAGTGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LLVGKGRSCGQPKREYRVSQDLS*SPKWAF
Trigger: GAAGGCCCACTTGGGACTCAAGCTGAGGTCCTGTGA...GACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342873.7
CDS-3UTR CAA 90 bp GCTGAAAGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAATCAGCCAGTTGGCCATaGGGCAGAGAGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: AESGYFIGWEREKLWSAQSASWP*GREQKV
Trigger: CACCTTCTGCTCTCTGCCCAATGGCCAACTGGCTGA...TTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR CAA 90 bp GGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATAACCTTCCCACAGCCATaGCGGCAGCATTTCATCTGG +
Preference number: 5 (lower is better)
Translates to: GYFIGWEREKLWSAQEGITFPQP*RQHFIW
Trigger: CCAGATGAAATGCTGCCGCAATGGCTGTGGGAAGGT...TATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CAA 90 bp ACCAGATGCAGGGCCAGGCAGAAACTTTCTCTCCTCACTGCTCAGCCTGGTGGTAAAGTGGTTACTTTATaGGTTGGGAAAGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: TRCRARQKLSLLTAQPGGKVVTL*VGKGRS
Trigger: GCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTT...ACCACCAGGCTGAGCAGTGAGGAGAGAAAGTTTCTGCCTGGCCCTGCATCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CAA 90 bp TGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAGTGGTTACTTTATaGGTTGGGAAAGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: WLGKGEAVVSPRGNTESRKVVTL*VGKGRS
Trigger: GCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTT...TCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CAA 90 bp GCTCAGAAATTGGGAGTGACACAGGACACCTTCCCACAGCCATTGCGGCAGCATAAAGTGGTTACTTTATaGGTTGGGAAAGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: AQKLGVTQDTFPQPLRQHKVVTL*VGKGRS
Trigger: GCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTT...ATGCTGCCGCAATGGCTGTGGGAAGGTGTCCTGTGTCACTCCCAATTTCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS-3UTR CAA 90 bp GGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAGAGTCCCGAAAAAGAAAGTGGTTACTTTATaGGTTGGGAAAGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: GKGRSCGQPKREYRVPKKKVVTL*VGKGRS
Trigger: GCTTCTCCCTTTCCCAACCAATAAAGTAACCACTTT...CTTTTTCGGGACTCTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339946.7
ENST00000342873.7
ENST00000372676.8
ENST00000447118.5
CDS-3UTR CAA 90 bp AGTGGTTACTTTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGATTAGAGTGGAAGAGATaGACTGAAAGACGACGAAGG +
Preference number: 5 (lower is better)
Translates to: SGYFIGWEREKLWSAQEGLEWKR*TERRRR
Trigger: CCTTCGTCGTCTTTCAGTCAATCTCTTCCACTCTAA...TCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAACCAATAAAGTAACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447118.5
CDS GCA 72 bp TGTCGGCGCATTCGCTGTCCGAGACGCACTCTTGCGTaGAGTTCTGGTCAGCCTGGAGCTCGGGGCACACGC +
Preference number: 6 (lower is better)
Translates to: CRRIRCPRRTLA*SSGQPGARGTR
Trigger: GCGTGTGCCCCGAGCTCCAGGCTGACCAGAACTGCACGCAAGAGTGCGTCTCGGACAGCGAATGCGCCGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217425.9
ENST00000372676.8
ENST00000447118.5
CDS GCA 72 bp AGGTTGTCGGCGCATTCGCTGTCCGAGACGCACTCTTaGGTGCAGTTCTGGTCAGCCTGGAGCTCGGGGCAC +
Preference number: 6 (lower is better)
Translates to: RLSAHSLSETHS*VQFWSAWSSGH
Trigger: GTGCCCCGAGCTCCAGGCTGACCAGAACTGCACGCAAGAGTGCGTCTCGGACAGCGAATGCGCCGACAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217425.9
ENST00000372676.8
ENST00000447118.5
CDS CAA 72 bp GAGGTTGTCGGCGCATTCGCTGTCCGAGACGCACTCTaGCGTGCAGTTCTGGTCAGCCTGGAGCTCGGGGCA +
Preference number: 6 (lower is better)
Translates to: EVVGAFAVRDAL*RAVLVSLELGA
Trigger: TGCCCCGAGCTCCAGGCTGACCAGAACTGCACGCAAGAGTGCGTCTCGGACAGCGAATGCGCCGACAACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217425.9
ENST00000372676.8
ENST00000447118.5
CDS CAA 72 bp CAGAAGGTGGCACAGCCCGCGCTGCAGCACTTGAGGTaGTCGGCGCATTCGCTGTCCGAGACGCACTCTTGC +
Preference number: 6 (lower is better)
Translates to: QKVAQPALQHLR*SAHSLSETHSC
Trigger: GCAAGAGTGCGTCTCGGACAGCGAATGCGCCGACAACCTCAAGTGCTGCAGCGCGGGCTGTGCCACCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217425.9
ENST00000372676.8
ENST00000447118.5
CDS CAA 90 bp GCAGCACTTGAGGTTGTCGGCGCATTCGCTGTCCGAGACGCACTCTaGCGTGCAGTTCTGGTCAGCCTGGAGCTCGGGGCACACGCCAGT +
Preference number: 6 (lower is better)
Translates to: AALEVVGAFAVRDAL*RAVLVSLELGAHAS
Trigger: ACTGGCGTGTGCCCCGAGCTCCAGGCTGACCAGAACTGCACGCAAGAGTGCGTCTCGGACAGCGAATGCGCCGACAACCTCAAGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217425.9
ENST00000372676.8
ENST00000447118.5
CDS CAA 90 bp GGCAGAGAGCAGAAGGTGGCACAGCCCGCGCTGCAGCACTTGAGGTaGTCGGCGCATTCGCTGTCCGAGACGCACTCTTGCGTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: GREQKVAQPALQHLR*SAHSLSETHSCVQF
Trigger: GAACTGCACGCAAGAGTGCGTCTCGGACAGCGAATGCGCCGACAACCTCAAGTGCTGCAGCGCGGGCTGTGCCACCTTCTGCTCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217425.9
ENST00000372676.8
ENST00000447118.5
CDS CCA 72 bp CATTCGCTGTCCGAGACGCACTCTTGCGTGCAGTTCTaGTCAGCCTGGAGCTCGGGGCACACGCCAGTCTTC +
Preference number: 6 (lower is better)
Translates to: HSLSETHSCVQF*SAWSSGHTPVF
Trigger: GAAGACTGGCGTGTGCCCCGAGCTCCAGGCTGACCAGAACTGCACGCAAGAGTGCGTCTCGGACAGCGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217425.9
ENST00000372676.8
ENST00000447118.5
CDS CAA 90 bp ATCTCCCAGAGCCTCCGTGTCTTTAGGTGCCAGTGGAACAGTGCATaGGGCAGAGAGCAGAAGGTGGCACAGCCCGCGCTGCAGCACTTG +
Preference number: 6 (lower is better)
Translates to: ISQSLRVFRCQWNSA*GREQKVAQPALQHL
Trigger: CAAGTGCTGCAGCGCGGGCTGTGCCACCTTCTGCTCTCTGCCCAATGCACTGTTCCACTGGCACCTAAAGACACGGAGGCTCTGGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217425.9
CDS TCA 72 bp CCTCCTGCTCCCAAATGGAATCACAGGACCTCAGCTTaGGTCCCAAGTGGGCCTTCGTGGCCTAGGGCCAGA +
Preference number: 6 (lower is better)
Translates to: PPAPKWNHRTSA*VPSGPSWPRAR
Trigger: TCTGGCCCTAGGCCACGAAGGCCCACTTGGGACTCAAGCTGAGGTCCTGTGATTCCATTTGGGAGCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342873.7
ENST00000488143.1
CDS GCA 72 bp GGGCCAGAAATCTCCCAGAGCCTCCGTGTCTTTAGGTaGCAGTGGAACAGTGCATTGGGCAGAGAGCAGAAG +
Preference number: 6 (lower is better)
Translates to: GPEISQSLRVFR*QWNSALGREQK
Trigger: CTTCTGCTCTCTGCCCAATGCACTGTTCCACTGGCACCTAAAGACACGGAGGCTCTGGGAGATTTCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217425.9
CDS CCA 72 bp CGACAGAGGCCGAGCTGGGGAAAGTTAATGTTCACCTaGGGGCAGGAACCCTCCTTATCTGAGACTAGGGTG +
Preference number: 6 (lower is better)
Translates to: RQRPSWGKLMFT*GQEPSLSETRV
Trigger: CACCCTAGTCTCAGATAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339946.7
CDS CCA 72 bp CGACAGAGGCCGAGCTGGGGAAAGTTAATGTTCACCTaGGGGCAGGAACCCTCCTTATCTGCAAATCCCTCC +
Preference number: 6 (lower is better)
Translates to: RQRPSWGKLMFT*GQEPSLSANPS
Trigger: GGAGGGATTTGCAGATAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488143.1
CDS CCA 72 bp GAAATCTCCCAGAGCCTCCGTGTCTTTAGGTGCCAGTaGAACAGTGCATTGGGCAGAGAGCAGAAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: EISQSLRVFRCQ*NSALGREQKVA
Trigger: TGCCACCTTCTGCTCTCTGCCCAATGCACTGTTCCACTGGCACCTAAAGACACGGAGGCTCTGGGAGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217425.9
CDS CCA 72 bp CGACAGAGGCCGAGCTGGGGAAAGTTAATGTTCACCTaGGGGCAGGAACCCTCCTTATCTTGGTTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: RQRPSWGKLMFT*GQEPSLSWFSP
Trigger: TGGAGAGAACCAAGATAAGGAGGGTTCCTGCCCCCAGGTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462062.5
CDS GCA 72 bp GGGCAGGAACCCTCCTTATCTGCAAATCCCTCCTCCTaGTCCCAAATGGAATCACAGGACCTCAGCTTGAGT +
Preference number: 6 (lower is better)
Translates to: GQEPSLSANPSS*SQMESQDLSLS
Trigger: ACTCAAGCTGAGGTCCTGTGATTCCATTTGGGAGCAGGAGGAGGGATTTGCAGATAAGGAGGGTTCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488143.1
CDS GCA 72 bp GGGCCAGAAATCTCCCAGAGCCTCCGTGTCTTTAGGTaGCAGTGGAACAGTGCTAATTACAACATAGGGTTG +
Preference number: 6 (lower is better)
Translates to: GPEISQSLRVFR*QWNSANYNIGL
Trigger: CAACCCTATGTTGTAATTAGCACTGTTCCACTGGCACCTAAAGACACGGAGGCTCTGGGAGATTTCTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342873.7
ENST00000488143.1
CDS CCA 72 bp GTTAATGTTCACCTGGGGGCAGGAACCCTCCTTATCTaGGTAGAAAAAGGAGTAAGGGTAAGTGGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: VNVHLGAGTLLI*VEKGVRVSGQR
Trigger: CCTCTGCCCACTTACCCTTACTCCTTTTTCTACCCAGATAAGGAGGGTTCCTGCCCCCAGGTGAACATTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342873.7