RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDTC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000142784

Ensembl transcript IDs: ENST00000319394.8, ENST00000361771.7, ENST00000447062.2, ENST00000472249.2, ENST00000491239.2

Found 700 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGGCAGGGGGTGGGAAGCAGGACAGGGGGCAGGGAGGGAGGGTaGGAGGCAGGGAGGAAATGGCAGGTGGCTGGAACACAAGAAAGC +
Preference number: 1 (lower is better)
Translates to: GRQGVGSRTGGREGG*EAGRKWQVAGTQES
Trigger: GCTTTCTTGTGTTCCAGCCACCTGCCATTTCCTCCCTGCCTCCCACCCTCCCTCCCTGCCCCCTGTCCTGCTTCCCACCCCCTGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR CCA 90 bp AGGAGCGCCCAAGAGGAGAATGGCCGTAGTGCAGAAGTGCTGGCATaGATGGGTGGGGTAAGGTGCAGTGCCCCACCCTCTGCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: RSAQEENGRSAEVLA*MGGVRCSAPPSARA
Trigger: GGCCCTGGCAGAGGGTGGGGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTCCTCTTGGGCGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR GCA 90 bp AATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTaGAGTGCCCCACCCTCTGCCAGGGCCCTTGGGAAAGGCAGAGCC +
Preference number: 1 (lower is better)
Translates to: NGRSAEVLAWMGGVR*SAPPSARALGKGRA
Trigger: GGCTCTGCCTTTCCCAAGGGCCCTGGCAGAGGGTGGGGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR CCA 90 bp AGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTaGGGCTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATC +
Preference number: 1 (lower is better)
Translates to: RPGEWWVDRCIQCKA*GCWGGRGRVRDFPI
Trigger: GATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR CCA 90 bp GCTCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTaGGGCTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATC +
Preference number: 1 (lower is better)
Translates to: APGEWWVDRCIQCKA*GCWGGRGRVRDFPI
Trigger: GATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447062.2
3UTR CCA 90 bp CTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTaGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGGGCAGGACA +
Preference number: 1 (lower is better)
Translates to: LGSKSGNRPRRALTN*ESHSSCCCQLKGRT
Trigger: TGTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR CCA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTaGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTC +
Preference number: 1 (lower is better)
Translates to: LKTTGELALQAREQE*QQAKASPYQLGIPL
Trigger: GAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR GCA 90 bp AGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTaGTGCCAGCTAAAGGGCAGGACAGTCCCTGAAGACAGTTCAGCT +
Preference number: 1 (lower is better)
Translates to: RPRRALTNWESHSSC*CQLKGRTVPEDSSA
Trigger: AGCTGAACTGTCTTCAGGGACTGTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR GCA 90 bp CCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTaGCAGCTAAAGGGCAGGACAGTCCCTGAAGACAGTTCAGCTTGT +
Preference number: 1 (lower is better)
Translates to: PRRALTNWESHSSCC*QLKGRTVPEDSSAC
Trigger: ACAAGCTGAACTGTCTTCAGGGACTGTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR GCA 90 bp AACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTaGTGCTGCCAGCTAAAGGGCAGGACAGTCCCTGAAGACAGTTCA +
Preference number: 1 (lower is better)
Translates to: NRPRRALTNWESHSS*CCQLKGRTVPEDSS
Trigger: TGAACTGTCTTCAGGGACTGTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR CCA 90 bp CTAAGTCATAGAGCTACAGAGGTGAGGGACCAGGTGCCCTCACTTTaGTTCCAAGACCCATCTGCACCCCACAAATGCCACCAGCCACAC +
Preference number: 1 (lower is better)
Translates to: LSHRATEVRDQVPSL*FQDPSAPHKCHQPH
Trigger: GTGTGGCTGGTGGCATTTGTGGGGTGCAGATGGGTCTTGGAACCAAAGTGAGGGCACCTGGTCCCTCACCTCTGTAGCTCTATGACTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319394.8
3UTR CCA 90 bp CACGGTGACCCTTCAAGGCAGGCCTCATTCTGTCCAGTAGAGGTGTaGTTACTAAGTCATAGAGCTACAGAGGTGAGGGACCAGGTGCCC +
Preference number: 1 (lower is better)
Translates to: HGDPSRQASFCPVEV*LLSHRATEVRDQVP
Trigger: GGGCACCTGGTCCCTCACCTCTGTAGCTCTATGACTTAGTAACCACACCTCTACTGGACAGAATGAGGCCTGCCTTGAAGGGTCACCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319394.8
3UTR TCA 90 bp AGATTCCAAGTCCCTTATTTTACTGATGAGAAAACAGCCAGAGAGTaGAAGCTGATGATTACAAATCACAGCCATGAGAGCTGGGCTCTG +
Preference number: 1 (lower is better)
Translates to: RFQVPYFTDEKTARE*KLMITNHSHESWAL
Trigger: CAGAGCCCAGCTCTCATGGCTGTGATTTGTAATCATCAGCTTTCACTCTCTGGCTGTTTTCTCATCAGTAAAATAAGGGACTTGGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319394.8
3UTR-3UTR GCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGCAGTGCCCCACCCTCTaGCAGGGCCCTTGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGQCPTL*QGPWER
Trigger: CCTTTCCCAAGGGCCCTGGCAGAGGGTGGGGCACTG...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAAGCGACCTCAGCAGGTaGCCTGGTCTTGCCCACTCC +
Preference number: 2 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGSDLSR*PGLAHS
Trigger: GGAGTGGGCAAGACCAGGCCACCTGCTGAGGTCGCT...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp GAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACCCCTCAAAGCTTGGGGCTGCTaGGGAGGGAGGGGCCGAGTA +
Preference number: 2 (lower is better)
Translates to: EGPSKGLSHLSGSGDPPLKAWGC*GGRGRV
Trigger: TACTCGGCCCCTCCCTCCCCAGCAGCCCCAAGCTTT...GAGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp GAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCCTCAGCAGGTGGCCTaGTCTTGCCCACTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: EGRRGLVSGGLIAASSVKPQQVA*SCPLQG
Trigger: GCCCTGGAGTGGGCAAGACCAGGCCACCTGCTGAGG...CTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR-3UTR CCA 90 bp AATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCCCCTCAGCAGGTGGCCTaGTCTTGCCCACTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: NGRSAEVLAWMGGVRCSAPQQVA*SCPLQG
Trigger: GCCCTGGAGTGGGCAAGACCAGGCCACCTGCTGAGG...GGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp AGGCAGAGCCTCCAGAGGTGGCCAGTGAGAGTAGGTGCAGGGCCAGAGCTAGTAAGCGACCTCAGCAGGTaGCCTGGTCTTGCCCACTCC +
Preference number: 2 (lower is better)
Translates to: RQSLQRWPVRVGAGPELVSDLSR*PGLAHS
Trigger: GGAGTGGGCAAGACCAGGCCACCTGCTGAGGTCGCT...TACTAGCTCTGGCCCTGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR TCA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACAAAACAGAATCCCCTaGCCTCCTGCCCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPQNRIP*PPAQGR
Trigger: TCTGCCCTGGGCAGGAGGTCAGGGGATTCTGTTTTG...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR GCA 90 bp GGCAGAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTCACTCCTCCTGCTGCTaGCAGCTAAAGGGCAGGACA +
Preference number: 2 (lower is better)
Translates to: GRGEERPGEWWVDRCIQCHSSCC*QLKGRT
Trigger: TGTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTG...ACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR-3UTR GCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACGAATCCCACTCCTCCTaGTGCTGCCAGCTAAAGGGC +
Preference number: 2 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDESHSS*CCQLKG
Trigger: GCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTC...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR GCA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGTGGGGTAAGGTGCAGTaGCCCACCCTCTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWWGKVQ*PTLCQG
Trigger: GCCCTGGCAGAGGGTGGGGCACTGCACCTTACCCCA...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR-3UTR CCA 90 bp AATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCCCTCTGCCAGGGCCCTTaGGAAAGGCAGAGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: NGRSAEVLAWMGGVRCSALCQGP*ERQSLQ
Trigger: CTGGAGGCTCTGCCTTTCCCAAGGGCCCTGGCAGAG...GGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGCAGAAGTGCTGGCATaGATGGGTGGGGTAAGGTGC +
Preference number: 2 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGAEVLA*MGGVRC
Trigger: GCACCTTACCCCACCCATCCATGCCAGCACTTCTGC...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR CAA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATaGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGGGCAGGAC +
Preference number: 2 (lower is better)
Translates to: AREQEWQQAKASPYQ*GIPLLLLLPAKGQD
Trigger: GTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR-3UTR CCA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGACGAGCCCTTACCAATTaGGAATCCCACTCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGRALTN*ESHSSC
Trigger: GCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCG...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp TGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGAGGGCAGAAGTGCTGGCATaGATGGGTGGGGTAAGGTGC +
Preference number: 2 (lower is better)
Translates to: WWVDRCIQCKAWGCWGGRAEVLA*MGGVRC
Trigger: GCACCTTACCCCACCCATCCATGCCAGCACTTCTGC...CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR TCA 90 bp GAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCAAAACAGAATCCCCTaGCCTCCTGCCCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: EGRRGLVSGGLIAASSVKQNRIP*PPAQGR
Trigger: TCTGCCCTGGGCAGGAGGTCAGGGGATTCTGTTTTG...CTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR-3UTR GCA 90 bp AAACCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGAATCCCCTGACCTCCTaGCCAGGGCAGAGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: KPFLKTTGELALQAREQENPLTS*PGQRVQ
Trigger: CTGGACCCTCTGCCCTGGGCAGGAGGTCAGGGGATT...CTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR GCA 90 bp TGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTaGTGCTGCCAGCTAAAGGGC +
Preference number: 2 (lower is better)
Translates to: CRLGSKSGNRPRRALTNWESHSS*CCQLKG
Trigger: GCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTC...CCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR-3UTR GCA 90 bp TCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGGCAGAGGAGAGGAGCGAGGGTaGTCCACAGCGACCTCAGCA +
Preference number: 2 (lower is better)
Translates to: SLLWSLWRLSMWDGKEGRGEERG*STATSA
Trigger: TGCTGAGGTCGCTGTGGAGCACCCTCGCTCCTCTCC...TCTGCCCTCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACGCTCTGGAGGGAGGGTaGGACCCATCCTTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDALEGG*DPSFFK
Trigger: TTTGAAAAAGGATGGGTCCCACCCTCCCTCCAGAGC...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp GAAGCTGCCACCTGTGTTGCTGGGATTAAAGCAATGAGATGGTGCCAGACCCCCAGCGACCTCAGCAGGTaGCCTGGTCTTGCCCACTCC +
Preference number: 2 (lower is better)
Translates to: EAATCVAGIKAMRWCQTPSDLSR*PGLAHS
Trigger: GGAGTGGGCAAGACCAGGCCACCTGCTGAGGTCGCT...GGGGGTCTGGCACCATCTCATTGCTTTAATCCCAGCAACACAGGTGGCAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR CAA 90 bp GAAGACAGTTCAGCTTGTTCCTCCCCACCTGAGGCAGAAGGGGTTTaGAGGCAGGCCAGAGCCCTCCAGGGACATGAAAGCAGGAGATGG +
Preference number: 2 (lower is better)
Translates to: EDSSACSSPPEAEGV*RQARALQGHESRRW
Trigger: CCATCTCCTGCTTTCATGTCCCTGGAGGGCTCTGGCCTGCCTCAAAACCCCTTCTGCCTCAGGTGGGGAGGAACAAGCTGAACTGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR TCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCAAAACAGAATCCCCTaGCCTCCTGCCCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: AREQEWQQAKASPYQLGIQNRIP*PPAQGR
Trigger: TCTGCCCTGGGCAGGAGGTCAGGGGATTCTGTTTTG...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR TCA 90 bp TGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGGGCAGGACAGTCCCTaGAGACAGTTCAGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: CRLGSKSGNRPRRALTNWGQDSP*RQFSLF
Trigger: GAACAAGCTGAACTGTCTTCAGGGACTGTCCTGCCC...CCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR-3UTR TCA 90 bp GAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGGGGCAGGACAGTCCCTaGAGACAGTTCAGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: EGRRGLVSGGLIAASSVKGQDSP*RQFSLF
Trigger: GAACAAGCTGAACTGTCTTCAGGGACTGTCCTGCCC...CTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR-3UTR TCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTTCCGGTAGCCCATGTTaGGCAGCATCACCTCCAACG +
Preference number: 2 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPSGSPC*AASPPT
Trigger: CGTTGGAGGTGATGCTGCTCAACATGGGCTACCGGA...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447062.2
3UTR-3UTR CCA 90 bp GAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCGAGCCCTTACCAATTaGGAATCCCACTCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: EGRRGLVSGGLIAASSVKRALTN*ESHSSC
Trigger: GCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCG...CTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR-3UTR GCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAAATCCCCTGACCTCCTaGCCAGGGCAGAGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGNPLTS*PGQRVQ
Trigger: CTGGACCCTCTGCCCTGGGCAGGAGGTCAGGGGATT...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR GCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGATCCCACTCCTCCTGCTaGTGCCAGCTAAAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGSHSSC*CQLKGR
Trigger: CCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGA...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp GAGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAGCTAGGGAGCAAGAGTaGCAACAGGCCAAGGCGAGC +
Preference number: 2 (lower is better)
Translates to: EKSHHFFGLCGGSACGMGAREQE*QQAKAS
Trigger: GCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC...TCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp GTGCCCTCACTTTGGTTCCAAGACCCATCTGCACCCCACAAATGCCACCAGCCATCACCCTCACTCTCCTaGGAGCGGAGCAACAAAAAG +
Preference number: 2 (lower is better)
Translates to: VPSLWFQDPSAPHKCHQPSPSLS*ERSNKK
Trigger: CTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGA...TGGCTGGTGGCATTTGTGGGGTGCAGATGGGTCTTGGAACCAAAGTGAGGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319394.8
3UTR-3UTR TCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAAGGGACTTTCCCATCTaGGTGGCTCAGGAGACCCAC +
Preference number: 2 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGRDFPI*VAQETH
Trigger: GTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCT...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR GCA 90 bp CAGCAAGTTGTAGCAACCTCCACCCCTAACGCCAAACTAACAAACAAAACAGGGAATCCCCTGACCTCCTaGCCAGGGCAGAGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: QQVVATSTPNAKLTNKTGNPLTS*PGQRVQ
Trigger: CTGGACCCTCTGCCCTGGGCAGGAGGTCAGGGGATT...CCCTGTTTTGTTTGTTAGTTTGGCGTTAGGGGTGGAGGTTGCTACAACTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp AGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGCTAGGGAGCAAGAGTaGCAACAGGCCAAGGCGAGC +
Preference number: 2 (lower is better)
Translates to: RKAITSLVFVAAQHVGWEAREQE*QQAKAS
Trigger: GCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC...TTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CCA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGCTTCTTTGGTCTTTGTaGCGGCTCAGCATGTGGGAT +
Preference number: 2 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWLLWSL*RLSMWD
Trigger: ATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAG...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR CCA 72 bp GGGGTGGGAAGCAGGACAGGGGGCAGGGAGGGAGGGTaGGAGGCAGGGAGGAAATGGCAGGTGGCTGGAACA +
Preference number: 3 (lower is better)
Translates to: GVGSRTGGREGG*EAGRKWQVAGT
Trigger: TGTTCCAGCCACCTGCCATTTCCTCCCTGCCTCCCACCCTCCCTCCCTGCCCCCTGTCCTGCTTCCCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR GCA 72 bp GGTGCTCCACAGCGACCTCAGCAGGTGGCCTGGTCTTaGCCACTCCAGGGCTCCCATCCTTCCTTTGGGCTC +
Preference number: 3 (lower is better)
Translates to: GAPQRPQQVAWS*PLQGSHPSFGL
Trigger: GAGCCCAAAGGAAGGATGGGAGCCCTGGAGTGGGCAAGACCAGGCCACCTGCTGAGGTCGCTGTGGAGCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR GCA 72 bp ATGGATGGGTGGGGTAAGGTGCAGTGCCCCACCCTCTaGCAGGGCCCTTGGGAAAGGCAGAGCCTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: MDGWGKVQCPTL*QGPWERQSLQR
Trigger: CCTCTGGAGGCTCTGCCTTTCCCAAGGGCCCTGGCAGAGGGTGGGGCACTGCACCTTACCCCACCCATCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR TCA 72 bp CTCAGCCCTGCTGGGCTGGGTGGCCGCTGCTCACGGTaGCCCTTCAAGGCAGGCCTCATTCTGTCCAGTAGA +
Preference number: 3 (lower is better)
Translates to: LSPAGLGGRCSR*PFKAGLILSSR
Trigger: TCTACTGGACAGAATGAGGCCTGCCTTGAAGGGTCACCGTGAGCAGCGGCCACCCAGCCCAGCAGGGCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319394.8
3UTR-3UTR CAA 90 bp GGGCAGAGAAGGGCCCTTAGCAGGAAGCGCCACCTCAGCAGAGTAGGCCTGGCTACAGGGGAGCTAGCCTaGCAGGCTAGGGAGCAAGAG +
Preference number: 3 (lower is better)
Translates to: GQRRALSRKRHLSRVGLATGELA*QAREQE
Trigger: CTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGT...AGCCAGGCCTACTCTGCTGAGGTGGCGCTTCCTGCTAAGGGCCCTTCTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR GCA 72 bp AGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTaGAGTGCCCCACCCTCTGCCAGGGCCCTTGGGAAA +
Preference number: 3 (lower is better)
Translates to: SAEVLAWMGGVR*SAPPSARALGK
Trigger: TTTCCCAAGGGCCCTGGCAGAGGGTGGGGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CAA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGCGAGCCCTTACCAATaGGGAATCCCACTCCTCCTG +
Preference number: 3 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGASPYQ*GIPLLL
Trigger: CAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGC...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR GCA 72 bp AAAGGCTCGGCTCCTGGTGAGTGGTGGGTTGATCGCTaGATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: KGSAPGEWWVDR*IQCKAWGCWGG
Trigger: CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGAGCCGAGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447062.2
3UTR-3UTR CAA 90 bp AGGCAGAGCCTCCAGAGGTGGCCAGTGAGAGTAGGTGCAGGGCCAGAGCTAGTAGCTCCCATCCTTCCTTaGGGCTCCGCTCTAACACTG +
Preference number: 3 (lower is better)
Translates to: RQSLQRWPVRVGAGPELVAPILP*GSALTL
Trigger: CAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGC...TACTAGCTCTGGCCCTGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR CCA 72 bp ACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTaGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGA +
Preference number: 3 (lower is better)
Translates to: TGELALQAREQE*QQAKASPYQLG
Trigger: TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR CCA 72 bp CAAGAGGAGAATGGCCGTAGTGCAGAAGTGCTGGCATaGATGGGTGGGGTAAGGTGCAGTGCCCCACCCTCT +
Preference number: 3 (lower is better)
Translates to: QEENGRSAEVLA*MGGVRCSAPPS
Trigger: AGAGGGTGGGGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTCCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR CCA 72 bp GTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTaGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATC +
Preference number: 3 (lower is better)
Translates to: VDRCIQCKAWGC*GGRGRVRDFPI
Trigger: GATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CAA 90 bp TTGCGTCACCCTCACTCTCCTGGGAGCGGAGCAACAAAAAGGCTCGGCTCCTGGCTGGTGAGTGGTGGGTaGATCGCTGCATCCAGTGTA +
Preference number: 3 (lower is better)
Translates to: LRHPHSPGSGATKRLGSWLVSGG*IAASSV
Trigger: TACACTGGATGCAGCGATCAACCCACCACTCACCAG...CCAGGAGCCGAGCCTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGACGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
3UTR-3UTR CAA 90 bp GAGAATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCTCCCATCCTTCCTTaGGGCTCCGCTCTAACACTG +
Preference number: 3 (lower is better)
Translates to: ENGRSAEVLAWMGGVRCSAPILP*GSALTL
Trigger: CAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGC...ACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR-3UTR CAA 90 bp TGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGAGGTCACTTCTTTGGTCTTaGTGGCGGCTCAGCATGTGG +
Preference number: 3 (lower is better)
Translates to: WWVDRCIQCKAWGCWGGRSLLWS*WRLSMW
Trigger: CCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA...CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR GCA 72 bp CGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTaGTGCCAGCTAAAGGGCAGGACAGTCCCTGAAGAC +
Preference number: 3 (lower is better)
Translates to: RALTNWESHSSC*CQLKGRTVPED
Trigger: GTCTTCAGGGACTGTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR GCA 72 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTaGTGCTGCCAGCTAAAGGGCAGGACAGTCCCTGAA +
Preference number: 3 (lower is better)
Translates to: RRALTNWESHSS*CCQLKGRTVPE
Trigger: TTCAGGGACTGTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR GCA 72 bp TCTCCTGGGAGCGGAGCAACAAAAAGGCTCGGCTCCTaGCCCCAGAGGACAGTAAGGCTTATGTGTCTCTCC +
Preference number: 3 (lower is better)
Translates to: SPGSGATKRLGS*PQRTVRLMCLS
Trigger: GGAGAGACACATAAGCCTTACTGTCCTCTGGGGGCAGGAGCCGAGCCTTTTTGTTGCTCCGCTCCCAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR CCA 72 bp ATTACCAAGCTAGAAGAGAGGGGTGGGAAGAGGGACTaGGGTGGGAAGGAAGGGGGAGAAGCTGCCACCTGT +
Preference number: 3 (lower is better)
Translates to: ITKLEERGGKRD*GGKEGGEAATC
Trigger: ACAGGTGGCAGCTTCTCCCCCTTCCTTCCCACCCCAGTCCCTCTTCCCACCCCTCTCTTCTAGCTTGGTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR CCA 72 bp AAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTaGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAG +
Preference number: 3 (lower is better)
Translates to: KSGNRPRRALTN*ESHSSCCCQLK
Trigger: CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR CCA 72 bp AGAGCTACAGAGGTGAGGGACCAGGTGCCCTCACTTTaGTTCCAAGACCCATCTGCACCCCACAAATGCCAC +
Preference number: 3 (lower is better)
Translates to: RATEVRDQVPSL*FQDPSAPHKCH
Trigger: GTGGCATTTGTGGGGTGCAGATGGGTCTTGGAACCAAAGTGAGGGCACCTGGTCCCTCACCTCTGTAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319394.8
3UTR CCA 72 bp GGGGACAGAGAAAAGCCATCACTTCTTTGGTCTTTGTaGCGGCTCAGCATGTGGGATGGGAAGGAGGGCAGA +
Preference number: 3 (lower is better)
Translates to: GDREKPSLLWSL*RLSMWDGKEGR
Trigger: TCTGCCCTCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTCTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR CCA 72 bp AGAGCAGCAGGGGACAGAGAAAAGCCATCACTTCTTTaGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAG +
Preference number: 3 (lower is better)
Translates to: RAAGDREKPSLL*SLWRLSMWDGK
Trigger: CTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTCTGTCCCCTGCTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR TCA 72 bp GTCCCTTATTTTACTGATGAGAAAACAGCCAGAGAGTaGAAGCTGATGATTACAAATCACAGCCATGAGAGC +
Preference number: 3 (lower is better)
Translates to: VPYFTDEKTARE*KLMITNHSHES
Trigger: GCTCTCATGGCTGTGATTTGTAATCATCAGCTTTCACTCTCTGGCTGTTTTCTCATCAGTAAAATAAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR GCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTCCTTGCGGCTCGTGCTaGGGAGGCGGACTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPPCGSC*GGGLGR
Trigger: GCGCCCCAGTCCGCCTCCGCAGCACGAGCCGCAAGG...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGGACCCAGCTGGTCCTTaGGCCCCAGGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGDPAGP*APGPSP
Trigger: GGGGCTGGGCCCTGGGGCCCAAGGACCAGCTGGGTC...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp GGGCAGAGAAGGGCCCTTAGCAGGAAGCGCCACCTCAGCAGAGTAGGCCTGGCTAGTCGGCTGCCCCCGTaGTCAAGATGCGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GQRRALSRKRHLSRVGLASRLPP*SRCGPQ
Trigger: CTGGGGACCGCATCTTGATCACGGGGGCAGCCGACT...AGCCAGGCCTACTCTGCTGAGGTGGCGCTTCCTGCTAAGGGCCCTTCTCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp ACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCTCTAGCCCCTTCCCATaGTCCCCGCCCGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGQGEPLPIGNPTPPAAASSPFP*SPPGAW
Trigger: CCAGGCGCCGGGCGGGGAGCATGGGAAGGGGCTAGA...GGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp TGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGCCTTGCGGCTCGTGCTaGGGAGGCGGACTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: CRLGSKSGNRPRRALTNWPCGSC*GGGLGR
Trigger: GCGCCCCAGTCCGCCTCCGCAGCACGAGCCGCAAGG...CCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CCCGGCACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATATGCGGTCCCCAGCGTaGGGCAGGAACTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: PGTPTAQARDPVAHVEQHMRSPA*GRNLTE
Trigger: CTCTGTCAAGTTCCTGCCTCACGCTGGGGACCGCAT...ATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGTGCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR TCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTAGTCGGCTGCCCCCGTaGTCAAGATGCGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPSRLPP*SRCGPQ
Trigger: CTGGGGACCGCATCTTGATCACGGGGGCAGCCGACT...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGAATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTCCTTGCGGCTCGTGCTaGGGAGGCGGACTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: ENGRSAEVLAWMGGVRCSPCGSC*GGGLGR
Trigger: GCGCCCCAGTCCGCCTCCGCAGCACGAGCCGCAAGG...ACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GGGCAGAGAAGGGCCCTTAGCAGGAAGCGCCACCTCAGCAGAGTAGGCCTGGCTCTGAGATGGAGTCCTTaGGGCTCGTGCTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQRRALSRKRHLSRVGLALRWSP*GSCCGG
Trigger: GCCTCCGCAGCACGAGCCGCAAGGACTCCATCTCAG...AGCCAGGCCTACTCTGCTGAGGTGGCGCTTCCTGCTAAGGGCCCTTCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTCAGTGCCCCACCCTCTaGCAGGGCCCTTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPQCPTL*QGPWER
Trigger: CCTTTCCCAAGGGCCCTGGCAGAGGGTGGGGCACTG...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp ACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATCACCTCTGGGGTAAGGTGCAGTaGCCCACCCTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TPTAQARDPVAHVEQHHLWGKVQ*PTLCQG
Trigger: GCCCTGGCAGAGGGTGGGGCACTGCACCTTACCCCA...GAGGTGATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR GCA 90 bp GCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTCTCTGCACTCAGCCCTaGTGGGCTGGGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AKASPYQLGIPLLLLLPALCTQP*WAGWPL
Trigger: CAGCGGCCACCCAGCCCAGCAGGGCTGAGTGCAGAG...AGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR CCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAAGACCCAGCTGGTCCTTaGGCCCCAGGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQDPAGP*APGPSP
Trigger: GGGGCTGGGCCCTGGGGCCCAAGGACCAGCTGGGTC...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp AGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGGAGGGAAGTCGGCTGCCCCCGTaGTCAAGATGCGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RAPILPLGSALTLVALEGSRLPP*SRCGPQ
Trigger: CTGGGGACCGCATCTTGATCACGGGGGCAGCCGACT...TCCCTCCAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GGGCAGAGAAGGGCCCTTAGCAGGAAGCGCCACCTCAGCAGAGTAGGCCTGGCTGGTGTGCACACCCGCTaGAGGGCTCTGCTTCATGCT +
Preference number: 4 (lower is better)
Translates to: GQRRALSRKRHLSRVGLAGVHTR*RALLHA
Trigger: AGCATGAAGCAGAGCCCTTCAGCGGGTGTGCACACC...AGCCAGGCCTACTCTGCTGAGGTGGCGCTTCCTGCTAAGGGCCCTTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGTCTAGCCCCTTCCCATaGTCCCCGCCCGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWSSPFP*SPPGAW
Trigger: CCAGGCGCCGGGCGGGGAGCATGGGAAGGGGCTAGA...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp GGGCAGAGAAGGGCCCTTAGCAGGAAGCGCCACCTCAGCAGAGTAGGCCTGGCTTGGGCGCTGTGGCGATaGGCTTCACCCGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GQRRALSRKRHLSRVGLAWALWR*ASPGLC
Trigger: ACACAAACCGGGTGAAGCGCATCGCCACAGCGCCCA...AGCCAGGCCTACTCTGCTGAGGTGGCGCTTCCTGCTAAGGGCCCTTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCCGCTGGCCCCAACTaGCAGGCAGTTGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDPAGPN*QAVVVL
Trigger: CAGGACAACAACTGCCTGGCAGTTGGGGCCAGCGGG...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CCCGGCACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATGATGTCGCGGCCCAATaGATCACAAGCGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: PGTPTAQARDPVAHVEQHDVAAQ*ITSAAV
Trigger: CACAGCAGCGCTTGTGATGCATTGGGCCGCGACATC...ATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGTGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR GCA 90 bp CCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGAGTCCTTGCGGCTCGTaGTGCGGAGGCGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: PFLKTTGELALQAREQEWSPCGS*CGGGLG
Trigger: CCCCAGTCCGCCTCCGCAGCACGAGCCGCAAGGACT...CCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCTGAGATGGAGTCCTTaGGGCTCGTGCTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDLRWSP*GSCCGG
Trigger: GCCTCCGCAGCACGAGCCGCAAGGACTCCATCTCAG...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCGGAGAGGAGCGAGGGTaGTCCACAGCGACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQGEPLPIGNPTPPAAASGEERG*STATSA
Trigger: TGCTGAGGTCGCTGTGGAGCACCCTCGCTCCTCTCC...GCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AGGCAGAGCCTCCAGAGGTGGCCAGTGAGAGTAGGTGCAGGGCCAGAGCTAGTATGGGGTAAGGTGCAGTaGCCCACCCTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RQSLQRWPVRVGAGPELVWGKVQ*PTLCQG
Trigger: GCCCTGGCAGAGGGTGGGGCACTGCACCTTACCCCA...TACTAGCTCTGGCCCTGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CCCGGCACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATCACTCCAGAATGTGTTaGGCCACATGGGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PGTPTAQARDPVAHVEQHHSRMC*ATWALW
Trigger: CCACAGCGCCCATGTGGCCCAACACATTCTGGAGTG...ATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGTGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CCA 90 bp AGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGGAGGGATCACGAAGGGCCCGCTaGCCCCAACTGCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RAPILPLGSALTLVALEGSRRAR*PQLPGS
Trigger: ACTGCCTGGCAGTTGGGGCCAGCGGGCCCTTCGTGA...TCCCTCCAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCAAAAGCTTGGGGCTGCTaGGGAGGGAGGGGCCGAGTA +
Preference number: 4 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPKAWGC*GGRGRV
Trigger: TACTCGGCCCCTCCCTCCCCAGCAGCCCCAAGCTTT...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CCCGGCACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATTTGACACATCCTGAGTaGCCCTGCAGCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PGTPTAQARDPVAHVEQHLTHPE*PCSSAS
Trigger: GGAAGCAGAGCTGCAGGGTCACTCAGGATGTGTCAA...ATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGTGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR TCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTATGCGGTCCCCAGCGTaGGGCAGGAACTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPMRSPA*GRNLTE
Trigger: CTCTGTCAAGTTCCTGCCTCACGCTGGGGACCGCAT...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACCACGACTCGGCCTGTaGGGTCTTCACTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPPRLGL*GLHSLV
Trigger: GACCAGAGAGTGAAGACCTCACAGGCCGAGTCGTGG...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACGCTCTGAAGCCTGACTaGGAGGAGGCACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDALKPD*EEAPGR
Trigger: TCTGCCAGGTGCCTCCTCTCAGTCAGGCTTCAGAGC...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGTGACCCTGCAGCTCTaGTTCCAGGCCCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWVTLQL*FQAQPP
Trigger: CGGCGGCTGGGCCTGGAAGCAGAGCTGCAGGGTCAC...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTGTGACCCTGCAGCTCTaGTTCCAGGCCCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPVTLQL*FQAQPP
Trigger: CGGCGGCTGGGCCTGGAAGCAGAGCTGCAGGGTCAC...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CACTCCAGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGCCCGCTGGCCCCAACTaGCAGGCAGTTGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HSRAPILPLGSALTLVALPAGPN*QAVVVL
Trigger: CAGGACAACAACTGCCTGGCAGTTGGGGCCAGCGGG...CAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCTGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACCCCTCCGGTCACAGAAGGTGTaGACACCCGCTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: EGPSKGLSHLSGSGDPPLRSQKV*TPAEGL
Trigger: GAGCCCTTCAGCGGGTGTGCACACCTTCTGTGACCG...GAGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCAGTCCTTGCGGCTCGTaGTGCGGAGGCGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: SKSGNRPRRALTNWESHSSPCGS*CGGGLG
Trigger: CCCCAGTCCGCCTCCGCAGCACGAGCCGCAAGGACT...GGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGGAGGGACTGAGATGGAGTCCTTaGGGCTCGTGCTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RAPILPLGSALTLVALEGLRWSP*GSCCGG
Trigger: GCCTCCGCAGCACGAGCCGCAAGGACTCCATCTCAG...TCCCTCCAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CACTCCAGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGAATCCCCTGACCTCCTaGCCAGGGCAGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: HSRAPILPLGSALTLVALNPLTS*PGQRVQ
Trigger: CTGGACCCTCTGCCCTGGGCAGGAGGTCAGGGGATT...CAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCTGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACTCCCACTCCTCCTGCTaGTGCCAGCTAAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDSHSSC*CQLKGR
Trigger: CCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGA...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp TGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGAGGGGAGAGGAGCGAGGGTaGTCCACAGCGACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WWVDRCIQCKAWGCWGGRGEERG*STATSA
Trigger: TGCTGAGGTCGCTGTGGAGCACCCTCGCTCCTCTCC...CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GTCACCCTCACTCTCCTGGGAGCGGAGCAACAAAAAGGCTCGGCTCCTGGTGAGATGGGTGGGGTAAGGTaGAGTGCCCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VTLTLLGAEQQKGSAPGEMGGVR*SAPPSA
Trigger: GGCAGAGGGTGGGGCACTGCACCTTACCCCACCCAT...CTCACCAGGAGCCGAGCCTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR GCA 90 bp TGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGAGGTGTGTCTCTCCACACTaGAGGGCCCAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WWVDRCIQCKAWGCWGGRCVSPH*RAQAGQ
Trigger: CTGCCCAGCCTGGGCCCTGCAGTGTGGAGAGACACA...CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp GAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACCCCTCATGAGAGCTGGGCTCTaGACTCAGCCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EGPSKGLSHLSGSGDPPLMRAGL*TQPCWA
Trigger: AGCCCAGCAGGGCTGAGTGCAGAGCCCAGCTCTCAT...GAGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR CCA 90 bp GAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACCCCTCATGTGTTGGGCCACATaGGCGCTGTGGCGATGCGCT +
Preference number: 4 (lower is better)
Translates to: EGPSKGLSHLSGSGDPPLMCWAT*ALWRCA
Trigger: AGCGCATCGCCACAGCGCCCATGTGGCCCAACACAT...GAGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CCCGGCACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATCGAGCCCTTACCAATTaGGAATCCCACTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGTPTAQARDPVAHVEQHRALTN*ESHSSC
Trigger: GCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCG...ATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGTGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CCA 90 bp ACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGGCTAGGGAGCAAGAGTaGCAACAGGCCAAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: TGELALQAREQEWQQAKAAREQE*QQAKAS
Trigger: GCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC...CGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp ACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCGACCTCAGCAGGTaGCCTGGTCTTGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: TGQGEPLPIGNPTPPAAASDLSR*PGLAHS
Trigger: GGAGTGGGCAAGACCAGGCCACCTGCTGAGGTCGCT...GGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTGCGTCACCCTCACTCTCCTGGGAGCGGAGCAACAAAAAGGCTCGGCTCCTGGAAAGCTTGGGGCTGCTaGGGAGGGAGGGGCCGAGTA +
Preference number: 4 (lower is better)
Translates to: LRHPHSPGSGATKRLGSWKAWGC*GGRGRV
Trigger: TACTCGGCCCCTCCCTCCCCAGCAGCCCCAAGCTTT...CCAGGAGCCGAGCCTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGACGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTTCAGCCCTGCTGGGCTaGGTGGCCGCTGCTCACGGT +
Preference number: 4 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPSALLG*VAAAHG
Trigger: ACCGTGAGCAGCGGCCACCCAGCCCAGCAGGGCTGA...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR TCA 90 bp GGCAGAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTGATCTTCAGGACCCCTaGGCATTCCAGCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRGEERPGEWWVDRCIQCDLQDP*AFQPSP
Trigger: TGGGCTTGGCTGGAATGCTCAGGGGTCCTGAAGATC...ACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCAGATCTTCAGGACCCCTaGGCATTCCAGCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPDLQDP*AFQPSP
Trigger: TGGGCTTGGCTGGAATGCTCAGGGGTCCTGAAGATC...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp TGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGAGGGGTGTGCACACCCGCTaGAGGGCTCTGCTTCATGCT +
Preference number: 4 (lower is better)
Translates to: WWVDRCIQCKAWGCWGGRGVHTR*RALLHA
Trigger: AGCATGAAGCAGAGCCCTTCAGCGGGTGTGCACACC...CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGGCTCTACTTGGGGGCTaGCATGTCCCCTACTCTCCG +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGALLGG*HVPYSP
Trigger: CGGAGAGTAGGGGACATGTCAGCCCCCAAGTAGAGC...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GGCAGAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTTTAGGGAGATGGCCTTaGGGCAGTCCCTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GRGEERPGEWWVDRCIQCLGRWP*GSPSGH
Trigger: ATGCCCTGAGGGACTGCCTCAAGGCCATCTCCCTAA...ACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp GGGCAGAGAAGGGCCCTTAGCAGGAAGCGCCACCTCAGCAGAGTAGGCCTGGCTGTGGCTGCAGGCAGTTaGCAATGGACTCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: GQRRALSRKRHLSRVGLAVAAGS*QWTHPL
Trigger: AAGGGGATGAGTCCATTGTCAACTGCCTGCAGCCAC...AGCCAGGCCTACTCTGCTGAGGTGGCGCTTCCTGCTAAGGGCCCTTCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAAGGGACTTTCCCATCTaGGTGGCTCAGGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGRDFPI*VAQETH
Trigger: GTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCT...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCAGAGCCAAGTAAGCACTaGAGGGGAAGCAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPEPSKH*RGSREG
Trigger: TCCCTCCCTGCTTCCCCTTCAGTGCTTACTTGGCTC...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp TGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGGCTGCTCTGAAGCCTaGCTGAGAGGAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: CRLGSKSGNRPRRALTNWGCSEA*LRGGTW
Trigger: CCAGGTGCCTCCTCTCAGTCAGGCTTCAGAGCAGCC...CCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGTCTCCAGGGCTGCTCTaGAGCCTGACTGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGSPGLL*SLTERR
Trigger: CCTCCTCTCAGTCAGGCTTCAGAGCAGCCCTGGAGA...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp GGGCAGAGAAGGGCCCTTAGCAGGAAGCGCCACCTCAGCAGAGTAGGCCTGGCTAGCAGCTTCTTGTGGTaGAGCGGGTCCCACACAATC +
Preference number: 4 (lower is better)
Translates to: GQRRALSRKRHLSRVGLASSFLW*SGSHTI
Trigger: GATTGTGTGGGACCCGCTGCACCACAAGAAGCTGCT...AGCCAGGCCTACTCTGCTGAGGTGGCGCTTCCTGCTAAGGGCCCTTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGTGGGCGCTGTGGCGATaGGCTTCACCCGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGWALWR*ASPGLC
Trigger: ACACAAACCGGGTGAAGCGCATCGCCACAGCGCCCA...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTCGGTCACAGAAGGTGTaGACACCCGCTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AKASPYQLGIPLLLLLPARSQKV*TPAEGL
Trigger: GAGCCCTTCAGCGGGTGTGCACACCTTCTGTGACCG...AGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CCCGGCACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATTACGTAATACTGGGCTaGACCGTCCGGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PGTPTAQARDPVAHVEQHYVILG*TVRKGF
Trigger: AAACCCCTTCCGGACGGTGCAGCCCAGTATTACGTA...ATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGTGCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR GCA 90 bp GGGCAGAGAAGGGCCCTTAGCAGGAAGCGCCACCTCAGCAGAGTAGGCCTGGCTATGGCTTGGGTCCACTaGTGGCAGGCAAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GQRRALSRKRHLSRVGLAMAWVH*WQAKAS
Trigger: TGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGCCAT...AGCCAGGCCTACTCTGCTGAGGTGGCGCTTCCTGCTAAGGGCCCTTCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACGGCCAGGCGAAAGTGTaGCTTCAGGTGGCATGGGTT +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDGQAKV*LQVAWV
Trigger: AACCCATGCCACCTGAAGGCACACTTTCGCCTGGCC...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTGCGCTGCTGTGGGCCTaGTCCGGAAATTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPALLWA*SGNFPL
Trigger: CAAAGGGAAATTTCCGGAGCAGGCCCACAGCAGCGC...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGATGTCGCGGCCCAATaGATCACAAGCGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGDVAAQ*ITSAAV
Trigger: CACAGCAGCGCTTGTGATGCATTGGGCCGCGACATC...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAAGCTGCCACCTGTGTTGCTGGGATTAAAGCAATGAGATGGTGCCAGACCCCCAGTCCTTGCGGCTCGTaGTGCGGAGGCGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: EAATCVAGIKAMRWCQTPSPCGS*CGGGLG
Trigger: CCCCAGTCCGCCTCCGCAGCACGAGCCGCAAGGACT...GGGGGTCTGGCACCATCTCATTGCTTTAATCCCAGCAACACAGGTGGCAGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTGCACAACAGGATCGATaGCACTGGTGGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPAQQDR*HWWPGS
Trigger: GCTTCCTGGCCACCAGTGGCATCGATCCTGTTGTGC...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR GCA 90 bp CACTCCAGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGACGGGTCTGCATTCATaGGCCGCTGGTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: HSRAPILPLGSALTLVALTGLHS*AAGWPV
Trigger: CACAGGCCAACCAGCGGCGCATGAATGCAGACCCGT...CAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACCCCTCCACCTCCAACGGGTCTaGATTCATGCGCCGCTGGTT +
Preference number: 4 (lower is better)
Translates to: EGPSKGLSHLSGSGDPPLHLQRV*IHAPLV
Trigger: AACCAGCGGCGCATGAATGCAGACCCGTTGGAGGTG...GAGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp TGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGAATCCCCTGACCTCCTaGCCAGGGCAGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: CRLGSKSGNRPRRALTNWNPLTS*PGQRVQ
Trigger: CTGGACCCTCTGCCCTGGGCAGGAGGTCAGGGGATT...CCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTCACTCCTCCTGCTGCTaGCAGCTAAAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPHSSCC*QLKGRT
Trigger: TGTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTG...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR GCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGTGCCCCACCCTCTaGCAGGGCCCTTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQQCPTL*QGPWER
Trigger: CCTTTCCCAAGGGCCCTGGCAGAGGGTGGGGCACTG...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCGCCACATGGGCGCTGTaGCGATGCGCTTCACCCGGT +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLATWAL*RCASPG
Trigger: ACCGGGTGAAGCGCATCGCCACAGCGCCCATGTGGC...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGCCACATGGGCGCTGTaGCGATGCGCTTCACCCGGT +
Preference number: 4 (lower is better)
Translates to: FRAGDSQGTISPESESQQATWAL*RCASPG
Trigger: ACCGGGTGAAGCGCATCGCCACAGCGCCCATGTGGC...TTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACCCCTCTTGGCCTCCACCAGCTaGCCACAGTACTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: EGPSKGLSHLSGSGDPPLLASTS*PQYSVR
Trigger: CCTGACAGAGTACTGTGGCCAGCTGGTGGAGGCCAA...GAGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCTCACGAAGGGCCCGCTaGCCCCAACTGCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LGSKSGNRPRRALTNWESSRRAR*PQLPGS
Trigger: ACTGCCTGGCAGTTGGGGCCAGCGGGCCCTTCGTGA...GGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTGATCGATGCCACTGGTaGCCAGGAAGCAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPDRCHW*PGSSSW
Trigger: CCAGCTACTGCTTCCTGGCCACCAGTGGCATCGATC...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACAGGATCGATGCCACTaGTGGCCAGGAAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPQDRCH*WPGSSS
Trigger: GCTACTGCTTCCTGGCCACCAGTGGCATCGATCCTG...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTTCATGCGCCGCTGGTTaGCCTGTGAAGCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: AKASPYQLGIPLLLLLPASCAAG*PVKHPP
Trigger: TGGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGA...AGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGCCTCAGCAGGTGGCCTaGTCTTGCCCACTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWPQQVA*SCPLQG
Trigger: GCCCTGGAGTGGGCAAGACCAGGCCACCTGCTGAGG...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCTCAGCAGGTGGCCTaGTCTTGCCCACTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AREQEWQQAKASPYQLGIPQQVA*SCPLQG
Trigger: GCCCTGGAGTGGGCAAGACCAGGCCACCTGCTGAGG...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCCTCAGCAGGTGGCCTaGTCTTGCCCACTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLPQQVA*SCPLQG
Trigger: GCCCTGGAGTGGGCAAGACCAGGCCACCTGCTGAGG...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTAGCGACCTCAGCAGGTaGCCTGGTCTTGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: VATGQGEPLPIGNPTPPASDLSR*PGLAHS
Trigger: GGAGTGGGCAAGACCAGGCCACCTGCTGAGGTCGCT...AGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGGCATGGATGGGTaGGGTAAGGTGCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: VATGQGEPLPIGNPTPPAAGMDG*GKVQCP
Trigger: GGGGCACTGCACCTTACCCCACCCATCCATGCCAGC...AGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp ACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATCACCTCGCAGAAGTGCTGGCATaGATGGGTGGGGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TPTAQARDPVAHVEQHHLAEVLA*MGGVRC
Trigger: GCACCTTACCCCACCCATCCATGCCAGCACTTCTGC...GAGGTGATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CCA 90 bp GAAGCTGCCACCTGTGTTGCTGGGATTAAAGCAATGAGATGGTGCCAGACCCCCTGCACTCAGCCCTGCTaGGCTGGGTGGCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: EAATCVAGIKAMRWCQTPCTQPC*AGWPLL
Trigger: GAGCAGCGGCCACCCAGCCCAGCAGGGCTGAGTGCA...GGGGGTCTGGCACCATCTCATTGCTTTAATCCCAGCAACACAGGTGGCAGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR TCA 90 bp GGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGTTGTAGCAACCTCCACCCCGGTGTGCACACCCGCTaGAGGGCTCTGCTTCATGCT +
Preference number: 4 (lower is better)
Translates to: GDNQPRVRKPASCSNLHPGVHTR*RALLHA
Trigger: AGCATGAAGCAGAGCCCTTCAGCGGGTGTGCACACC...GGGGTGGAGGTTGCTACAACTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTGTGGCTGCAGGCAGTTaGCAATGGACTCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPVAAGS*QWTHPL
Trigger: AAGGGGATGAGTCCATTGTCAACTGCCTGCAGCCAC...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR TCA 90 bp GTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTCCACGACTCGGCCTGTaGGGTCTTCACTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: VATGQGEPLPIGNPTPPAPRLGL*GLHSLV
Trigger: GACCAGAGAGTGAAGACCTCACAGGCCGAGTCGTGG...AGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR TCA 90 bp GGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGTTGTAGCAACCTCCACCCCCCACGACTCGGCCTGTaGGGTCTTCACTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GDNQPRVRKPASCSNLHPPRLGL*GLHSLV
Trigger: GACCAGAGAGTGAAGACCTCACAGGCCGAGTCGTGG...GGGGTGGAGGTTGCTACAACTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CACTCCAGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGCCGCTGGTTGGCCTGTaGAGCACCCTCCATATCTTC +
Preference number: 4 (lower is better)
Translates to: HSRAPILPLGSALTLVALPLVGL*STLHIF
Trigger: GAAGATATGGAGGGTGCTTCACAGGCCAACCAGCGG...CAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCTGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CACTCCAGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGTCCGGTAGCCCATGTTaGGCAGCATCACCTCCAACG +
Preference number: 4 (lower is better)
Translates to: HSRAPILPLGSALTLVALSGSPC*AASPPT
Trigger: CGTTGGAGGTGATGCTGCTCAACATGGGCTACCGGA...CAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCTGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp AAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCCAAAACAGAATCCCCTaGCCTCCTGCCCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KTTGELALQAREQEWQQAQNRIP*PPAQGR
Trigger: TCTGCCCTGGGCAGGAGGTCAGGGGATTCTGTTTTG...GGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCGGGCAGGACAGTCCCTaGAGACAGTTCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GQGEPLPIGNPTPPAAASGQDSP*RQFSLF
Trigger: GAACAAGCTGAACTGTCTTCAGGGACTGTCCTGCCC...GCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR TCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGAGGGACTTTCCCATCTaGGTGGCTCAGGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGRDFPI*VAQETH
Trigger: GTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCT...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAAGGCTGCTCTGAAGCCTaGCTGAGAGGAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQGCSEA*LRGGTW
Trigger: CCAGGTGCCTCCTCTCAGTCAGGCTTCAGAGCAGCC...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGATAGAGCTACAGAGGTaGGGGACCAGGTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGIELQR*GTRCPH
Trigger: GTGAGGGCACCTGGTCCCTCACCTCTGTAGCTCTAT...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR GCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTAGCAGCTTCTTGTGGTaGAGCGGGTCCCACACAATC +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPSSFLW*SGSHTI
Trigger: GATTGTGTGGGACCCGCTGCACCACAAGAAGCTGCT...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACAGCAGCTTCTTGTGGTaGAGCGGGTCCCACACAATC +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDSSFLW*SGSHTI
Trigger: GATTGTGTGGGACCCGCTGCACCACAAGAAGCTGCT...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GTCACCCTCACTCTCCTGGGAGCGGAGCAACAAAAAGGCTCGGCTCCTGGTGAGCACCTTAGAGTCGGCTaGCCCCGTGATCAAGATGCG +
Preference number: 4 (lower is better)
Translates to: VTLTLLGAEQQKGSAPGEHLRVG*PRDQDA
Trigger: CGCATCTTGATCACGGGGGCAGCCGACTCTAAGGTG...CTCACCAGGAGCCGAGCCTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR GCA 90 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGCCCGCTGGCCCCAACTaGCAGGCAGTTGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RRALTNWESHSSCCCQLKPAGPN*QAVVVL
Trigger: CAGGACAACAACTGCCTGGCAGTTGGGGCCAGCGGG...CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCCGCTGAAGGGCTCTaGTTCATGCTCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDPAEGL*FMLFLW
Trigger: CCACAGAAAGAGCATGAAGCAGAGCCCTTCAGCGGG...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTCGGTCACAGAAGGTGTaGACACCCGCTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VATGQGEPLPIGNPTPPARSQKV*TPAEGL
Trigger: GAGCCCTTCAGCGGGTGTGCACACCTTCTGTGACCG...AGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCACTGGCAGGTGACCTaGTACGTAATACTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDHWQVT*YVILGC
Trigger: GCAGCCCAGTATTACGTAGCAGGTCACCTGCCAGTG...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACCCCTCCACTGGCAGGTGACCTaGTACGTAATACTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EGPSKGLSHLSGSGDPPLHWQVT*YVILGC
Trigger: GCAGCCCAGTATTACGTAGCAGGTCACCTGCCAGTG...GAGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACCCCTCATGGCTTGGGTCCACTaGTGGCAGGCAAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: EGPSKGLSHLSGSGDPPLMAWVH*WQAKAS
Trigger: TGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGCCAT...GAGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCGGTCACCATCCCACTTaGGCTTCATGTAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GQGEPLPIGNPTPPAAASGHHPT*ASCRLL
Trigger: CAGCAGCCTACATGAAGCGCAAGTGGGATGGTGACC...GCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTTATCCGTGGTGGTGTTaGAGTGGCCGCAGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: AKASPYQLGIPLLLLLPAYPWWC*SGRSSG
Trigger: TCCGCTACTGCGGCCACTGCAACACCACCACGGATA...AGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp TCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGACGGGTCTGCATTCATaGGCCGCTGGTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SGLGIVRGQSAQSPKASKTGLHS*AAGWPV
Trigger: CACAGGCCAACCAGCGGCGCATGAATGCAGACCCGT...CTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAACGGGTCTGCATTCATaGGCCGCTGGTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PRRALTNWESHSSCCCQLTGLHS*AAGWPV
Trigger: CACAGGCCAACCAGCGGCGCATGAATGCAGACCCGT...TAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR GCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGCACTCCTCCTGCTGCTaGCAGCTAAAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGHSSCC*QLKGRT
Trigger: TGTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTG...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTGAATCCCACTCCTCCTaGTGCTGCCAGCTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: AKASPYQLGIPLLLLLPAESHSS*CCQLKG
Trigger: GCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTC...AGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR GCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGGAATCCCACTCCTCCTaGTGCTGCCAGCTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGESHSS*CCQLKG
Trigger: GCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTC...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAAGCTGCCACCTGTGTTGCTGGGATTAAAGCAATGAGATGGTGCCAGACCCCCTGGGGTAAGGTGCAGTaGCCCACCCTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EAATCVAGIKAMRWCQTPWGKVQ*PTLCQG
Trigger: GCCCTGGCAGAGGGTGGGGCACTGCACCTTACCCCA...GGGGGTCTGGCACCATCTCATTGCTTTAATCCCAGCAACACAGGTGGCAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp AGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCATGGGTGGGGTAAGGTaGAGTGCCCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SKSGNRPRRALTNWESHSMGGVR*SAPPSA
Trigger: GGCAGAGGGTGGGGCACTGCACCTTACCCCACCCAT...GGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTATGGGTGGGGTAAGGTaGAGTGCCCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPMGGVR*SAPPSA
Trigger: GGCAGAGGGTGGGGCACTGCACCTTACCCCACCCAT...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp TTCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAATGTGTCTCTCCACACTaGAGGGCCCAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FRAGDSQGTISPESESQQCVSPH*RAQAGQ
Trigger: CTGCCCAGCCTGGGCCCTGCAGTGTGGAGAGACACA...TTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGACACACAATCGTGTGCTaGTCATCGGAACCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGHTIVC*SSEPEA
Trigger: GGCCTCTGGTTCCGATGACCAGCACACGATTGTGTG...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGAGGGAGAGCAGCTTCTTGTaGTGCAGCGGGTCCCACACA +
Preference number: 4 (lower is better)
Translates to: WWVDRCIQCKAWGCWGGRESSFL*CSGSHT
Trigger: TGTGTGGGACCCGCTGCACCACAAGAAGCTGCTCTC...CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGATGTGTTGGGCCACATaGGCGCTGTGGCGATGCGCT +
Preference number: 4 (lower is better)
Translates to: CRLGSKSGNRPRRALTNWMCWAT*ALWRCA
Trigger: AGCGCATCGCCACAGCGCCCATGTGGCCCAACACAT...CCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCAAGGCAGTTGTTGTCCTaGGGGTTGACAGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPRQLLS*GLTVRH
Trigger: GTGCCTCACTGTCAACCCCCAGGACAACAACTGCCT...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGGCAGATCACGAAGGGCCCGCTaGCCCCAACTGCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SLLWSLWRLSMWDGKEGRSRRAR*PQLPGS
Trigger: ACTGCCTGGCAGTTGGGGCCAGCGGGCCCTTCGTGA...TCTGCCCTCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp ACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATCACCTCGACATCTTGCCATTCTaGACTTCCCCCGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TPTAQARDPVAHVEQHHLDILPF*TSPEEW
Trigger: CCACTCCTCGGGGGAAGTCCAGAATGGCAAGATGTC...GAGGTGATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CCA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGCTTGGGTCCACTGCTaGCAGGCAAAAGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGAWVHC*QAKASL
Trigger: CAATGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGC...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTGCACACGGACCAGGTTaGTGGTCTCCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPAHGPG*WSPFPR
Trigger: TCTGGGAAAAGGAGACCACCAACCTGGTCCGTGTGC...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000472249.2
CDS-3UTR CCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTGCAGTAGCTGGGGTGTaGCTGCAGGCAGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPAVAGV*LQAVDN
Trigger: ATTGTCAACTGCCTGCAGCCACACCCCAGCTACTGC...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp AGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGGAGGGAGATCGATGCCACTGGTaGCCAGGAAGCAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RAPILPLGSALTLVALEGDRCHW*PGSSSW
Trigger: CCAGCTACTGCTTCCTGGCCACCAGTGGCATCGATC...TCCCTCCAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGGATCGATGCCACTGGTaGCCAGGAAGCAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGDRCHW*PGSSSW
Trigger: CCAGCTACTGCTTCCTGGCCACCAGTGGCATCGATC...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AGGCAGAGCCTCCAGAGGTGGCCAGTGAGAGTAGGTGCAGGGCCAGAGCTAGTACAGGATCGATGCCACTaGTGGCCAGGAAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: RQSLQRWPVRVGAGPELVQDRCH*WPGSSS
Trigger: GCTACTGCTTCCTGGCCACCAGTGGCATCGATCCTG...TACTAGCTCTGGCCCTGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTTCATGCGCCGCTGGTTaGCCTGTGAAGCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: VATGQGEPLPIGNPTPPASCAAG*PVKHPP
Trigger: TGGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGA...AGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp GAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGGCATTCATGCGCCGCTaGTTGGCCTGTGAAGCACCC +
Preference number: 4 (lower is better)
Translates to: EGRRGLVSGGLIAASSVKAFMRR*LACEAP
Trigger: GGGTGCTTCACAGGCCAACCAGCGGCGCATGAATGC...CTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp CCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGGCTAGGGAGCAAGAGTaGCAACAGGCCAAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: PFLKTTGELALQAREQEWAREQE*QQAKAS
Trigger: GCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC...CCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp GTGCCCTCACTTTGGTTCCAAGACCCATCTGCACCCCACAAATGCCACCAGCCAAGCGACCTCAGCAGGTaGCCTGGTCTTGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: VPSLWFQDPSAPHKCHQPSDLSR*PGLAHS
Trigger: GGAGTGGGCAAGACCAGGCCACCTGCTGAGGTCGCT...TGGCTGGTGGCATTTGTGGGGTGCAGATGGGTCTTGGAACCAAAGTGAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR CCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCTCTGCCAGGGCCCTTaGGAAAGGCAGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTLCQGP*ERQSLQ
Trigger: CTGGAGGCTCTGCCTTTCCCAAGGGCCCTGGCAGAG...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTCTGCCAGGGCCCTTaGGAAAGGCAGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLLCQGP*ERQSLQ
Trigger: CTGGAGGCTCTGCCTTTCCCAAGGGCCCTGGCAGAG...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTGCTGGCATGGATGGGTaGGGTAAGGTGCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTAGMDG*GKVQCP
Trigger: GGGGCACTGCACCTTACCCCACCCATCCATGCCAGC...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAACTTTCCCATCTGAGTaGCTCAGGAGACCCACCCCT +
Preference number: 4 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGTFPSE*LRRPTP
Trigger: AGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGT...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTACTTTCCCATCTGAGTaGCTCAGGAGACCCACCCCT +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPTFPSE*LRRPTP
Trigger: AGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGT...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp ACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCATCCAGTGTAAAGCTTaGGGCTGCTGGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TGQGEPLPIGNPTPPAAAIQCKA*GCWGGR
Trigger: CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGAT...GGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACTGCAGCTGGAGGGCTaGAGCCAAGTAAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPLQLEG*SQVSTE
Trigger: TTCAGTGCTTACTTGGCTCCAGCCCTCCAGCTGCAG...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp GGCAGAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTGACATCTTGCCATTCTaGACCCCCGAGGAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: GRGEERPGEWWVDRCIQCDILPF*TPEEWH
Trigger: ATGCCACTCCTCGGGGGTCCAGAATGGCAAGATGTC...ACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361771.7
CDS-3UTR CCA 90 bp AAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCTCGGCTCCTGGTGAGTaGTGGGTTGATCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: KTTGELALQAREQEWQQASAPGE*WVDRCI
Trigger: GATGCAGCGATCAACCCACCACTCACCAGGAGCCGA...GGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR TCA 90 bp ACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCACAGTTGACACATCCTaGGTGACCCTGCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TGQGEPLPIGNPTPPAAATVDTS*VTLQLC
Trigger: GCAGAGCTGCAGGGTCACTCAGGATGTGTCAACTGT...GGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GTCACCCTCACTCTCCTGGGAGCGGAGCAACAAAAAGGCTCGGCTCCTGGTGAGCTGTGCCATTGGGGCTaGAGGTCACATAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VTLTLLGAEQQKGSAPGELCHWG*RSHRWQ
Trigger: TTGCCACCTATGTGACCTTCAGCCCCAATGGCACAG...CTCACCAGGAGCCGAGCCTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR TCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGCGGAAGCCATTGCTATaGAGGTGCAGGCCATTGGAC +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGRKPLL*RCRPLD
Trigger: GTCCAATGGCCTGCACCTTCATAGCAATGGCTTCCG...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCGCTCTACTTGGGGGCTaGCATGTCCCCTACTCTCCG +
Preference number: 4 (lower is better)
Translates to: AREQEWQQAKASPYQLGIALLGG*HVPYSP
Trigger: CGGAGAGTAGGGGACATGTCAGCCCCCAAGTAGAGC...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTAGAAGAGGGCAGCTGTaGTGTCGCGGCCCAATGCAT +
Preference number: 4 (lower is better)
Translates to: VATGQGEPLPIGNPTPPARRGQL*CRGPMH
Trigger: ATGCATTGGGCCGCGACATCACAGCTGCCCTCTTCT...AGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGAGAAGAGGGCAGCTGTaGTGTCGCGGCCCAATGCAT +
Preference number: 4 (lower is better)
Translates to: PFLKTTGELALQAREQEWRRGQL*CRGPMH
Trigger: ATGCATTGGGCCGCGACATCACAGCTGCCCTCTTCT...CCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp ACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGCATCGTCAGAGCCACTaGCGATATACTGAGCGTTGC +
Preference number: 4 (lower is better)
Translates to: TGELALQAREQEWQQAKAHRQSH*RYTERC
Trigger: GCAACGCTCAGTATATCGTCAGTGGCTCTGACGATG...CGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGGTGGCTGCAGGCAGTTaGCAATGGACTCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGVAAGS*QWTHPL
Trigger: AAGGGGATGAGTCCATTGTCAACTGCCTGCAGCCAC...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCACGACTCGGCCTGTaGGGTCTTCACTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTPRLGL*GLHSLV
Trigger: GACCAGAGAGTGAAGACCTCACAGGCCGAGTCGTGG...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR TCA 90 bp AGGGCAGGACAGTCCCTGAAGACAGTTCAGCTTGTTCCCCTGACCTCCTGCCCACCGCTGGTTGGCCTGTaGAGCACCCTCCATATCTTC +
Preference number: 4 (lower is better)
Translates to: RAGQSLKTVQLVPLTSCPPLVGL*STLHIF
Trigger: GAAGATATGGAGGGTGCTTCACAGGCCAACCAGCGG...TGGGCAGGAGGTCAGGGGAACAAGCTGAACTGTCTTCAGGGACTGTCCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472249.2
CDS-3UTR TCA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGATCCGGTAGCCCATGTTaGGCAGCATCACCTCCAACG +
Preference number: 4 (lower is better)
Translates to: QAREQEWQQAKASPYQLGSGSPC*AASPPT
Trigger: CGTTGGAGGTGATGCTGCTCAACATGGGCTACCGGA...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR TCA 90 bp GGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGTTGTAGCAACCTCCACCCCCAAAACAGAATCCCCTaGCCTCCTGCCCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GDNQPRVRKPASCSNLHPQNRIP*PPAQGR
Trigger: TCTGCCCTGGGCAGGAGGTCAGGGGATTCTGTTTTG...GGGGTGGAGGTTGCTACAACTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTACAAAACAGAATCCCCTaGCCTCCTGCCCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PRRALTNWESHSSCCCQLQNRIP*PPAQGR
Trigger: TCTGCCCTGGGCAGGAGGTCAGGGGATTCTGTTTTG...TAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp TGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGAGGGACTTTCCCATCTaGGTGGCTCAGGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: CRLGSKSGNRPRRALTNWRDFPI*VAQETH
Trigger: GTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCT...CCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAGAGCCAAGTAAGCACTaGAGGGGAAGCAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QAREQEWQQAKASPYQLGEPSKH*RGSREG
Trigger: TCCCTCCCTGCTTCCCCTTCAGTGCTTACTTGGCTC...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTGCTCTGAAGCCTGACTaGGAGGAGGCACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTALKPD*EEAPGR
Trigger: TCTGCCAGGTGCCTCCTCTCAGTCAGGCTTCAGAGC...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGTCTCCAGGGCTGCTCTaGAGCCTGACTGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RRALTNWESHSSCCCQLKSPGLL*SLTERR
Trigger: CCTCCTCTCAGTCAGGCTTCAGAGCAGCCCTGGAGA...CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp CTCTGGAGGGAGGGTGGGACCCATCCTTTTTCAAAACCTTTCCTGAAGACCACAGGCCGCTGCTCACGGTaGCCCTTCAAGGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LWREGGTHPFSKPFLKTTGRCSR*PFKAGL
Trigger: GAGGCCTGCCTTGAAGGGTCACCGTGAGCAGCGGCC...TGTGGTCTTCAGGAAAGGTTTTGAAAAAGGATGGGTCCCACCCTCCCTCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR GCA 90 bp AGGCAGAGCCTCCAGAGGTGGCCAGTGAGAGTAGGTGCAGGGCCAGAGCTAGTACCCCGCTCCTTGATCTaGCTACGGATGAGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: RQSLQRWPVRVGAGPELVPRSLI*LRMRSL
Trigger: TAGAGACCTCATCCGTAGGCAGATCAAGGAGCGGGG...TACTAGCTCTGGCCCTGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGGTCAGGTCGTGCACATaGACCTTAGAGTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EGRRGLVSGGLIAASSVKVRSCT*TLESAA
Trigger: GGCAGCCGACTCTAAGGTGCATGTGCACGACCTGAC...CTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp AATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCCGTCAGGTCGTGCACATaGACCTTAGAGTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NGRSAEVLAWMGGVRCSAVRSCT*TLESAA
Trigger: GGCAGCCGACTCTAAGGTGCATGTGCACGACCTGAC...GGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCTGGGCGCTGTGGCGATaGGCTTCACCCGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LGSKSGNRPRRALTNWESWALWR*ASPGLC
Trigger: ACACAAACCGGGTGAAGCGCATCGCCACAGCGCCCA...GGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp TGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGAGGCCCGCTGAAGGGCTCTaGTTCATGCTCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: WWVDRCIQCKAWGCWGGRPAEGL*FMLFLW
Trigger: CCACAGAAAGAGCATGAAGCAGAGCCCTTCAGCGGG...CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCCTCCGGAAGGGGTTTCTaGCGGTCACAGAAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: NGRSAEVLAWMGGVRCSASGRGF*RSQKVC
Trigger: GCACACCTTCTGTGACCGGCAGAAACCCCTTCCGGA...GGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp TGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGAGGCGTTGGTGGACATCTTaGCATTCTGGACTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: WWVDRCIQCKAWGCWGGRRWWTS*HSGLPP
Trigger: CGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACG...CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGATGGCTTGGGTCCACTaGTGGCAGGCAAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGMAWVH*WQAKAS
Trigger: TGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGCCAT...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAGCGCTGCTGTGGGCCTaGTCCGGAAATTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: QAREQEWQQAKASPYQLGALLWA*SGNFPL
Trigger: CAAAGGGAAATTTCCGGAGCAGGCCCACAGCAGCGC...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp TTCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAACGGGTCTGCATTCATaGGCCGCTGGTTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: FRAGDSQGTISPESESQQTGLHS*AAGWPV
Trigger: CACAGGCCAACCAGCGGCGCATGAATGCAGACCCGT...TTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCACCTCCAACGGGTCTaGATTCATGCGCCGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PFLKTTGELALQAREQEWHLQRV*IHAPLV
Trigger: AACCAGCGGCGCATGAATGCAGACCCGTTGGAGGTG...CCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR GCA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGCACCTCCAACGGGTCTaGATTCATGCGCCGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LKTTGELALQAREQEWQQHLQRV*IHAPLV
Trigger: AACCAGCGGCGCATGAATGCAGACCCGTTGGAGGTG...CTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR GCA 90 bp TCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGCACTCCTCCTGCTGCTaGCAGCTAAAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SGLGIVRGQSAQSPKASKHSSCC*QLKGRT
Trigger: TGTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTG...CTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTTCCCACTCCTCCTGCTaGTGCCAGCTAAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPSHSSC*CQLKGR
Trigger: CCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGA...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR GCA 90 bp CCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAGCCCCAATACTCCTaGTCTCCCTTCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PFLKTTGELALQAREQEWQPQYS*SPFSLA
Trigger: AGCCAGGGAGAAGGGAGAGCAGGAGTATTGGGGCTG...CCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp CCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTACAGCCCCAATACTCCTaGTCTCCCTTCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PRRALTNWESHSSCCCQLQPQYS*SPFSLA
Trigger: AGCCAGGGAGAAGGGAGAGCAGGAGTATTGGGGCTG...TAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp AATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCCAAAAGGCTCGGCTCCTaGCCCCAGAGGACAGTAAGG +
Preference number: 4 (lower is better)
Translates to: NGRSAEVLAWMGGVRCSAKRLGS*PQRTVR
Trigger: CCTTACTGTCCTCTGGGGGCAGGAGCCGAGCCTTTT...GGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp AATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCCGAGAGCAGCTTCTTGTaGTGCAGCGGGTCCCACACA +
Preference number: 4 (lower is better)
Translates to: NGRSAEVLAWMGGVRCSAESSFL*CSGSHT
Trigger: TGTGTGGGACCCGCTGCACCACAAGAAGCTGCTCTC...GGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp ACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGTGTGTCCCGTGTGCATaGAGAGCAGCTTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TGELALQAREQEWQQAKACVPCA*RAASCG
Trigger: ACCACAAGAAGCTGCTCTCCATGCACACGGGACACA...CGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAATGTGTTGGGCCACATaGGCGCTGTGGCGATGCGCT +
Preference number: 4 (lower is better)
Translates to: FRAGDSQGTISPESESQQMCWAT*ALWRCA
Trigger: AGCGCATCGCCACAGCGCCCATGTGGCCCAACACAT...TTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGTTGGCCTCCACCAGCTaGCCACAGTACTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PFLKTTGELALQAREQEWLASTS*PQYSVR
Trigger: CCTGACAGAGTACTGTGGCCAGCTGGTGGAGGCCAA...CCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGGCTTGGGTCCACTGCTaGCAGGCAAAAGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGAWVHC*QAKASL
Trigger: CAATGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGC...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp ACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATCACCTCTGCTGTAAAGCTGAATaGCTTGGGTCCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TPTAQARDPVAHVEQHHLCCKAE*LGSTAG
Trigger: GCCAGCAGTGGACCCAAGCCATTCAGCTTTACAGCA...GAGGTGATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CCA 90 bp ACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCTCACAAGCGCTGCTGTaGGCCTGCTCCGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: TGQGEPLPIGNPTPPAAASQALL*ACSGNF
Trigger: GAAATTTCCGGAGCAGGCCCACAGCAGCGCTTGTGA...GGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CACTCCAGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGTCACAAGCGCTGCTGTaGGCCTGCTCCGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: HSRAPILPLGSALTLVALSQALL*ACSGNF
Trigger: GAAATTTCCGGAGCAGGCCCACAGCAGCGCTTGTGA...CAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCTGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACTTTCATCCTCTGAGATaGAGTCCTTGCGGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDFHPLR*SPCGSC
Trigger: GCACGAGCCGCAAGGACTCCATCTCAGAGGATGAAA...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGGAGGGAATGGACTCATCCCCTTaGAGCACACGGACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RAPILPLGSALTLVALEGMDSSP*STRTRL
Trigger: CAACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCAT...TCCCTCCAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTATGGACTCATCCCCTTaGAGCACACGGACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AKASPYQLGIPLLLLLPAMDSSP*STRTRL
Trigger: CAACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCAT...AGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp AAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCGCAGTAGCTGGGGTGTaGCTGCAGGCAGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: KTTGELALQAREQEWQQAAVAGV*LQAVDN
Trigger: ATTGTCAACTGCCTGCAGCCACACCCCAGCTACTGC...GGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGCAGGATCGATGCCACTaGTGGCCAGGAAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LKTTGELALQAREQEWQQQDRCH*WPGSSS
Trigger: GCTACTGCTTCCTGGCCACCAGTGGCATCGATCCTG...CTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp GAGAATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTTCATGCGCCGCTGGTTaGCCTGTGAAGCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: ENGRSAEVLAWMGGVRCSSCAAG*PVKHPP
Trigger: TGGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGA...ACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAAGCATTCATGCGCCGCTaGTTGGCCTGTGAAGCACCC +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQAFMRR*LACEAP
Trigger: GGGTGCTTCACAGGCCAACCAGCGGCGCATGAATGC...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGGCTAGGGAGCAAGAGTaGCAACAGGCCAAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: RRALTNWESHSSCCCQLKAREQE*QQAKAS
Trigger: GCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC...CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAAGCTAGGGAGCAAGAGTaGCAACAGGCCAAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQAREQE*QQAKAS
Trigger: GCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCAGCTCTGGAGGGAGGGTaGGACCCATCCTTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPALEGG*DPSFFK
Trigger: TTTGAAAAAGGATGGGTCCCACCCTCCCTCCAGAGC...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGACAGAGCCTCCAGAGGTaGCCAGTGAGAGTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: QAREQEWQQAKASPYQLGQSLQR*PVRVGA
Trigger: TGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTG...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAGCAGAAGTGCTGGCATaGATGGGTGGGGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: PRRALTNWESHSSCCCQLAEVLA*MGGVRC
Trigger: GCACCTTACCCCACCCATCCATGCCAGCACTTCTGC...TAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GGGCAGAGAAGGGCCCTTAGCAGGAAGCGCCACCTCAGCAGAGTAGGCCTGGCTCTTCTTTGGTCTTTGTaGCGGCTCAGCATGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GQRRALSRKRHLSRVGLALLWSL*RLSMWD
Trigger: ATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAG...AGCCAGGCCTACTCTGCTGAGGTGGCGCTTCCTGCTAAGGGCCCTTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGATCCAGTGTAAAGCTTaGGGCTGCTGGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LKTTGELALQAREQEWQQIQCKA*GCWGGR
Trigger: CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGAT...CTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGAGGCCTGGTGAGTGGTaGGTTGATCGCTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: LKTTGELALQAREQEWQQRPGEW*VDRCIQ
Trigger: CTGGATGCAGCGATCAACCCACCACTCACCAGGCCT...CTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp AGGCAGAGCCTCCAGAGGTGGCCAGTGAGAGTAGGTGCAGGGCCAGAGCTAGTAGAGGCAGGGAGGAAATaGCAGGTGGCTGGAACACAA +
Preference number: 4 (lower is better)
Translates to: RQSLQRWPVRVGAGPELVEAGRK*QVAGTQ
Trigger: TTGTGTTCCAGCCACCTGCCATTTCCTCCCTGCCTC...TACTAGCTCTGGCCCTGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACTCACCCTCACTCTCCTaGGAGCGGAGCAACAAAAAG +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDSPSLS*ERSNKK
Trigger: CTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGA...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCAGGTGCCCTCACTTTaGTTCCAAGACCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDQVPSL*FQDPSA
Trigger: TGCAGATGGGTCTTGGAACCAAAGTGAGGGCACCTG...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR CCA 90 bp GTCACCCTCACTCTCCTGGGAGCGGAGCAACAAAAAGGCTCGGCTCCTGGTGAGGCACACGGACCAGGTTaGTGGTCTCCTGCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VTLTLLGAEQQKGSAPGEAHGPG*WSPAKE
Trigger: TTCTTTGGCAGGAGACCACCAACCTGGTCCGTGTGC...CTCACCAGGAGCCGAGCCTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CCA 90 bp AATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCCGCTCCTGGTGAGTGGTaGGTTGATCGCTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: NGRSAEVLAWMGGVRCSAAPGEW*VDRCIQ
Trigger: CTGGATGCAGCGATCAACCCACCACTCACCAGGAGC...GGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR TCA 90 bp GGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGTTGTAGCAACCTCCACCCCTTGACACATCCTGAGTaGCCCTGCAGCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GDNQPRVRKPASCSNLHPLTHPE*PCSSAS
Trigger: GGAAGCAGAGCTGCAGGGTCACTCAGGATGTGTCAA...GGGGTGGAGGTTGCTACAACTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGACGGAAGCCATTGCTATaGAGGTGCAGGCCATTGGAC +
Preference number: 4 (lower is better)
Translates to: QAREQEWQQAKASPYQLGRKPLL*RCRPLD
Trigger: GTCCAATGGCCTGCACCTTCATAGCAATGGCTTCCG...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp AGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTTAGGGAGATGGCCTTaGGGCAGTCCCTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SKSGNRPRRALTNWESHSLGRWP*GSPSGH
Trigger: ATGCCCTGAGGGACTGCCTCAAGGCCATCTCCCTAA...GGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp TGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGCTTCAGCCACATACTTaGGCTCAAAGAGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: CRLGSKSGNRPRRALTNWLQPHT*AQRGSG
Trigger: CCCGCTGCCTCTTTGAGCTCAAGTATGTGGCTGAAG...CCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTACTTCAGCCACATACTTaGGCTCAAAGAGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PRRALTNWESHSSCCCQLLQPHT*AQRGSG
Trigger: CCCGCTGCCTCTTTGAGCTCAAGTATGTGGCTGAAG...TAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp TGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGAGGCCGGAAATTTCCCTTTaGAGTCGTCCAGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: WWVDRCIQCKAWGCWGGRPEISL*SRPGTP
Trigger: TGGAGTGCCTGGACGACTTCAAAGGGAAATTTCCGG...CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp TTCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAAGAAGAGGGCAGCTGTaGTGTCGCGGCCCAATGCAT +
Preference number: 4 (lower is better)
Translates to: FRAGDSQGTISPESESQQRRGQL*CRGPMH
Trigger: ATGCATTGGGCCGCGACATCACAGCTGCCCTCTTCT...TTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp AAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCCATCGTCAGAGCCACTaGCGATATACTGAGCGTTGC +
Preference number: 4 (lower is better)
Translates to: KTTGELALQAREQEWQQAHRQSH*RYTERC
Trigger: GCAACGCTCAGTATATCGTCAGTGGCTCTGACGATG...GGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp GTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGTGGCTGCAGGCAGTTaGCAATGGACTCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: VATGQGEPLPIGNPTPPAVAAGS*QWTHPL
Trigger: AAGGGGATGAGTCCATTGTCAACTGCCTGCAGCCAC...AGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR TCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACCGCTGGTTGGCCTGTaGAGCACCCTCCATATCTTC +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQPLVGL*STLHIF
Trigger: GAAGATATGGAGGGTGCTTCACAGGCCAACCAGCGG...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR TCA 90 bp GAGAATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTTCCGGTAGCCCATGTTaGGCAGCATCACCTCCAACG +
Preference number: 4 (lower is better)
Translates to: ENGRSAEVLAWMGGVRCSSGSPC*AASPPT
Trigger: CGTTGGAGGTGATGCTGCTCAACATGGGCTACCGGA...ACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGTGACCCTGCAGCTCTaGTTCCAGGCCCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RKAITSLVFVAAQHVGWEVTLQL*FQAQPP
Trigger: CGGCGGCTGGGCCTGGAAGCAGAGCTGCAGGGTCAC...TTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTTCCCACACAATCGTGTaGTGGTCATCGGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: AKASPYQLGIPLLLLLPASHTIV*WSSEPE
Trigger: CTCTGGTTCCGATGACCAGCACACGATTGTGTGGGA...AGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AGGCAGAGCCTCCAGAGGTGGCCAGTGAGAGTAGGTGCAGGGCCAGAGCTAGTATCCCACACAATCGTGTaGTGGTCATCGGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: RQSLQRWPVRVGAGPELVSHTIV*WSSEPE
Trigger: CTCTGGTTCCGATGACCAGCACACGATTGTGTGGGA...TACTAGCTCTGGCCCTGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCACCTTAGAGTCGGCTaGCCCCGTGATCAAGATGCG +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLHLRVG*PRDQDA
Trigger: CGCATCTTGATCACGGGGGCAGCCGACTCTAAGGTG...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGAATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTCACCTTAGAGTCGGCTaGCCCCGTGATCAAGATGCG +
Preference number: 4 (lower is better)
Translates to: ENGRSAEVLAWMGGVRCSHLRVG*PRDQDA
Trigger: CGCATCTTGATCACGGGGGCAGCCGACTCTAAGGTG...ACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAAGTCAGGTCGTGCACATaGACCTTAGAGTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQVRSCT*TLESAA
Trigger: GGCAGCCGACTCTAAGGTGCATGTGCACGACCTGAC...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACGCACCTCCGAGTGTTTaGTGTTCTCTCGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDAPPSV*CSLEGH
Trigger: ATGACCTTCGAGAGAACAGCAAACACTCGGAGGTGC...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTTCCGGAAGGGGTTTCTaGCGGTCACAGAAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTSGRGF*RSQKVC
Trigger: GCACACCTTCTGTGACCGGCAGAAACCCCTTCCGGA...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACCCCTCCCCTCTGCACAGCCTTaGTGTAAAGCTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: EGPSKGLSHLSGSGDPPLPSAQP*CKAEWL
Trigger: AAGCCATTCAGCTTTACAGCAAGGCTGTGCAGAGGG...GAGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CCCGGCACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATCTTCATGTAGGCTGCTaGTCGGTTTCCATAAAGCAT +
Preference number: 4 (lower is better)
Translates to: PGTPTAQARDPVAHVEQHLHVGC*SVSIKH
Trigger: ATGCTTTATGGAAACCGAGCAGCAGCCTACATGAAG...ATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGTGCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR GCA 90 bp TCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGGGTCACCATCCCACTTaGGCTTCATGTAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SGLGIVRGQSAQSPKASKGHHPT*ASCRLL
Trigger: CAGCAGCCTACATGAAGCGCAAGTGGGATGGTGACC...CTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAAGGCCAGGCGAAAGTGTaGCTTCAGGTGGCATGGGTT +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQGQAKV*LQVAWV
Trigger: AACCCATGCCACCTGAAGGCACACTTTCGCCTGGCC...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCGCGCTGCTGTGGGCCTaGTCCGGAAATTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SKSGNRPRRALTNWESHSALLWA*SGNFPL
Trigger: CAAAGGGAAATTTCCGGAGCAGGCCCACAGCAGCGC...GGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCGATGTCGCGGCCCAATaGATCACAAGCGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: AREQEWQQAKASPYQLGIDVAAQ*ITSAAV
Trigger: CACAGCAGCGCTTGTGATGCATTGGGCCGCGACATC...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGTATCCGTGGTGGTGTTaGAGTGGCCGCAGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWYPWWC*SGRSSG
Trigger: TCCGCTACTGCGGCCACTGCAACACCACCACGGATA...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCTATCCGTGGTGGTGTTaGAGTGGCCGCAGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLYPWWC*SGRSSG
Trigger: TCCGCTACTGCGGCCACTGCAACACCACCACGGATA...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GTGCCCTCACTTTGGTTCCAAGACCCATCTGCACCCCACAAATGCCACCAGCCAGCACAACAGGATCGATaGCACTGGTGGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VPSLWFQDPSAPHKCHQPAQQDR*HWWPGS
Trigger: GCTTCCTGGCCACCAGTGGCATCGATCCTGTTGTGC...TGGCTGGTGGCATTTGTGGGGTGCAGATGGGTCTTGGAACCAAAGTGAGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR GCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACACCTCCAACGGGTCTaGATTCATGCGCCGCTGGTT +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQHLQRV*IHAPLV
Trigger: AACCAGCGGCGCATGAATGCAGACCCGTTGGAGGTG...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR GCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCACTCCTCCTGCTGCTaGCAGCTAAAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPHSSCC*QLKGRT
Trigger: TGTCCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTG...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR GCA 90 bp CTAAAGGGCAGGACAGTCCCTGAAGACAGTTCAGCTTGTTCCCCTGACCTCCTGTCCCACTCCTCCTGCTaGTGCCAGCTAAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LKGRTVPEDSSACSPDLLSHSSC*CQLKGR
Trigger: CCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGA...CAGGAGGTCAGGGGAACAAGCTGAACTGTCTTCAGGGACTGTCCTGCCCTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472249.2
CDS-3UTR GCA 90 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGGAATCCCACTCCTCCTaGTGCTGCCAGCTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: RRALTNWESHSSCCCQLKESHSS*CCQLKG
Trigger: GCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTC...CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR GCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTGAATCCCACTCCTCCTaGTGCTGCCAGCTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPESHSS*CCQLKG
Trigger: GCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTC...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR GCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGACAGTGCCCCACCCTCTaGCAGGGCCCTTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGQCPTL*QGPWER
Trigger: CCTTTCCCAAGGGCCCTGGCAGAGGGTGGGGCACTG...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTGGTGGGTTGATCGCTaGATCCAGTGTAAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GQGEPLPIGNPTPPAAASWWVDR*IQCKAW
Trigger: CCAAGCTTTACACTGGATGCAGCGATCAACCCACCA...GCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTAAAAGGCTCGGCTCCTaGCCCCAGAGGACAGTAAGG +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTKRLGS*PQRTVR
Trigger: CCTTACTGTCCTCTGGGGGCAGGAGCCGAGCCTTTT...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp CACTCCAGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGTCTGCACCCCACAAATaGCACCAGCCACACCTAGAA +
Preference number: 4 (lower is better)
Translates to: HSRAPILPLGSALTLVALSAPHK*HQPHLE
Trigger: TTCTAGGTGTGGCTGGTGGCATTTGTGGGGTGCAGA...CAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCTGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR CCA 90 bp GTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTCACACAATCGTGTGCTaGTCATCGGAACCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VATGQGEPLPIGNPTPPAHTIVC*SSEPEA
Trigger: GGCCTCTGGTTCCGATGACCAGCACACGATTGTGTG...AGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGCCACATGGGCGCTGTaGCGATGCGCTTCACCCGGT +
Preference number: 4 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGATWAL*RCASPG
Trigger: ACCGGGTGAAGCGCATCGCCACAGCGCCCATGTGGC...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCACTCCAGAATGTGTTaGGCCACATGGGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTHSRMC*ATWALW
Trigger: CCACAGCGCCCATGTGGCCCAACACATTCTGGAGTG...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAATTGGCCTCCACCAGCTaGCCACAGTACTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: FRAGDSQGTISPESESQQLASTS*PQYSVR
Trigger: CCTGACAGAGTACTGTGGCCAGCTGGTGGAGGCCAA...TTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGAGGCAGTTGTTGTCCTaGGGGTTGACAGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: EGRRGLVSGGLIAASSVKRQLLS*GLTVRH
Trigger: GTGCCTCACTGTCAACCCCCAGGACAACAACTGCCT...CTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp GCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTGTCAGGAAGCTTCACTaGCAGGTGACCTGCTACGTA +
Preference number: 4 (lower is better)
Translates to: AKASPYQLGIPLLLLLPAVRKLH*QVTCYV
Trigger: TACGTAGCAGGTCACCTGCCAGTGAAGCTTCCTGAC...AGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTGCGTCACCCTCACTCTCCTGGGAGCGGAGCAACAAAAAGGCTCGGCTCCTGGACTTCCCCCGAGGAGTaGCATTTTCTAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LRHPHSPGSGATKRLGSWTSPEE*HFLGKR
Trigger: CCTCTTGCCTAGAAAATGCCACTCCTCGGGGGAAGT...CCAGGAGCCGAGCCTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGACGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCACCCCTCTGGACACACCGTTGGTaGACATCTTGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: EGPSKGLSHLSGSGDPPLWTHRW*TSCHSG
Trigger: TCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCA...GAGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCGTTGGACACACCGTTaGTGGACATCTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDRWTHR*WTSCHS
Trigger: AGAATGGCAAGATGTCCACCAACGGTGTGTCCAACG...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCCGGTGGTAGCTCTACTTaGGGGCTGACATGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: NGRSAEVLAWMGGVRCSAGGSST*GLTCPL
Trigger: TAGGGGACATGTCAGCCCCCAAGTAGAGCTACCACC...GGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCTGCTGTAAAGCTGAATaGCTTGGGTCCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KTTGELALQAREQEWQQACCKAE*LGSTAG
Trigger: GCCAGCAGTGGACCCAAGCCATTCAGCTTTACAGCA...GGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGGAGGGATTTCATCCTCTGAGATaGAGTCCTTGCGGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: RAPILPLGSALTLVALEGFHPLR*SPCGSC
Trigger: GCACGAGCCGCAAGGACTCCATCTCAGAGGATGAAA...TCCCTCCAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGTTTCATCCTCTGAGATaGAGTCCTTGCGGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: EWWVDRCIQCKAWGCWGGFHPLR*SPCGSC
Trigger: GCACGAGCCGCAAGGACTCCATCTCAGAGGATGAAA...CCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGGCACACGGACCAGGTTaGTGGTCTCCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PFLKTTGELALQAREQEWAHGPG*WSPFPR
Trigger: TCTGGGAAAAGGAGACCACCAACCTGGTCCGTGTGC...CCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000472249.2
CDS-3UTR CCA 90 bp AATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCCATGGACTCATCCCCTTaGAGCACACGGACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: NGRSAEVLAWMGGVRCSAMDSSP*STRTRL
Trigger: CAACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCAT...GGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCAGGATCGATGCCACTaGTGGCCAGGAAGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLQDRCH*WPGSSS
Trigger: GCTACTGCTTCCTGGCCACCAGTGGCATCGATCCTG...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp AAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAATCATGCGCCGCTGGTTaGCCTGTGAAGCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: KASPYQLGIPLLLLLPAKSCAAG*PVKHPP
Trigger: TGGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGA...TTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp AAACCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGGCATTCATGCGCCGCTaGTTGGCCTGTGAAGCACCC +
Preference number: 4 (lower is better)
Translates to: KPFLKTTGELALQAREQEAFMRR*LACEAP
Trigger: GGGTGCTTCACAGGCCAACCAGCGGCGCATGAATGC...CTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp TGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGCGAGCCCTTACCAATTaGGAATCCCACTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CRLGSKSGNRPRRALTNWRALTN*ESHSSC
Trigger: GCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCG...CCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGACGAGCCCTTACCAATTaGGAATCCCACTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QAREQEWQQAKASPYQLGRALTN*ESHSSC
Trigger: GCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCG...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp CTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCAGAGCCTCCAGAGGTaGCCAGTGAGAGTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LGSKSGNRPRRALTNWESQSLQR*PVRVGA
Trigger: TGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTG...GGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAACAGAGCCTCCAGAGGTaGCCAGTGAGAGTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: FRAGDSQGTISPESESQQQSLQR*PVRVGA
Trigger: TGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTG...TTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTGCAGAAGTGCTGGCATaGATGGGTGGGGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTAEVLA*MGGVRC
Trigger: GCACCTTACCCCACCCATCCATGCCAGCACTTCTGC...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAAATCCAGTGTAAAGCTTaGGGCTGCTGGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQIQCKA*GCWGGR
Trigger: CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGAT...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCAGGCCTGGTGAGTGGTaGGTTGATCGCTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLRPGEW*VDRCIQ
Trigger: CTGGATGCAGCGATCAACCCACCACTCACCAGGCCT...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGGAGAGGCCTGGTGAGTaGTGGGTTGATCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: RRALTNWESHSSCCCQLKERPGE*WVDRCI
Trigger: GATGCAGCGATCAACCCACCACTCACCAGGCCTCTC...CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp TCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGCTGCAGCTGGAGGGCTaGAGCCAAGTAAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: SGLGIVRGQSAQSPKASKLQLEG*SQVSTE
Trigger: TTCAGTGCTTACTTGGCTCCAGCCCTCCAGCTGCAG...CTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp GGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCGGAGGAAATGGCAGGTaGCTGGAACACAAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GQGEPLPIGNPTPPAAASGGNGR*LEHKKA
Trigger: TGCTTTCTTGTGTTCCAGCCACCTGCCATTTCCTCC...GCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp GGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGTTGTAGCAACCTCCACCCCTGGACCCCCGAGGAGTaGCATTTTCTAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GDNQPRVRKPASCSNLHPWTPEE*HFLGKR
Trigger: CCTCTTGCCTAGAAAATGCCACTCCTCGGGGGTCCA...GGGGTGGAGGTTGCTACAACTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361771.7
CDS-3UTR CCA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGACACGGACCAGGTTGGTaGTCTCCTGCCAAAGAAATT +
Preference number: 4 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGHGPGW*SPAKEI
Trigger: AATTTCTTTGGCAGGAGACCACCAACCTGGTCCGTG...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR TCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACTGTGCCATTGGGGCTaGAGGTCACATAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQLCHWG*RSHRWQ
Trigger: TTGCCACCTATGTGACCTTCAGCCCCAATGGCACAG...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTTCAGCCACATACTTaGGCTCAAAGAGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLLQPHT*AQRGSG
Trigger: CCCGCTGCCTCTTTGAGCTCAAGTATGTGGCTGAAG...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCGGGCAGGACAGTCCCTaGAGACAGTTCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLGQDSP*RQFSLF
Trigger: GAACAAGCTGAACTGTCTTCAGGGACTGTCCTGCCC...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR TCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTGGGCAGGACAGTCCCTaGAGACAGTTCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPGQDSP*RQFSLF
Trigger: GAACAAGCTGAACTGTCTTCAGGGACTGTCCTGCCC...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR TCA 90 bp TGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGTACAAATCACAGCCATaGGAGCTGGGCTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: CRLGSKSGNRPRRALTNWYKSQP*ELGSAL
Trigger: GAGTGCAGAGCCCAGCTCTCATGGCTGTGATTTGTA...CCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR GCA 90 bp AGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCCCCCGCTCCTTGATCTaGCTACGGATGAGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: SKSGNRPRRALTNWESHSPRSLI*LRMRSL
Trigger: TAGAGACCTCATCCGTAGGCAGATCAAGGAGCGGGG...GGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCCCGCTCCTTGATCTaGCTACGGATGAGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTPRSLI*LRMRSL
Trigger: TAGAGACCTCATCCGTAGGCAGATCAAGGAGCGGGG...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp ACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGTTTACTGTCAGGTCGTaGACATGCACCTTAGAGTCG +
Preference number: 4 (lower is better)
Translates to: TGELALQAREQEWQQAKAFTVRS*TCTLES
Trigger: CGACTCTAAGGTGCATGTGCACGACCTGACAGTAAA...CGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCGCACCTCCGAGTGTTTaGTGTTCTCTCGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: KTTGELALQAREQEWQQAAPPSV*CSLEGH
Trigger: ATGACCTTCGAGAGAACAGCAAACACTCGGAGGTGC...GGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CACTCCAGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGGCACCTCCGAGTGTTTaGTGTTCTCTCGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HSRAPILPLGSALTLVALAPPSV*CSLEGH
Trigger: ATGACCTTCGAGAGAACAGCAAACACTCGGAGGTGC...CAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCTGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCCGCTGAAGGGCTCTaGTTCATGCTCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AREQEWQQAKASPYQLGIPAEGL*FMLFLW
Trigger: CCACAGAAAGAGCATGAAGCAGAGCCCTTCAGCGGG...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp TCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGGCAGATCCGGAAGGGGTTTCTaGCGGTCACAGAAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SLLWSLWRLSMWDGKEGRSGRGF*RSQKVC
Trigger: GCACACCTTCTGTGACCGGCAGAAACCCCTTCCGGA...TCTGCCCTCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCCCCTCTGCACAGCCTTaGTGTAAAGCTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: KTTGELALQAREQEWQQAPSAQP*CKAEWL
Trigger: AAGCCATTCAGCTTTACAGCAAGGCTGTGCAGAGGG...GGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGGCCAGGCGAAAGTGTaGCTTCAGGTGGCATGGGTT +
Preference number: 4 (lower is better)
Translates to: KASPYQLGIPLLLLLPAKGQAKV*LQVAWV
Trigger: AACCCATGCCACCTGAAGGCACACTTTCGCCTGGCC...TTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGAGAGGAGCGAGGGTaGTCCACAGCGACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGGEERG*STATSA
Trigger: TGCTGAGGTCGCTGTGGAGCACCCTCGCTCCTCTCC...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGGAGGGATGGTGGGTTGATCGCTaGATCCAGTGTAAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RAPILPLGSALTLVALEGWWVDR*IQCKAW
Trigger: CCAAGCTTTACACTGGATGCAGCGATCAACCCACCA...TCCCTCCAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCACACAATCGTGTGCTaGTCATCGGAACCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTHTIVC*SSEPEA
Trigger: GGCCTCTGGTTCCGATGACCAGCACACGATTGTGTG...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp ACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGTTCACCCGGTTTGTGTaGTCTCCAAACATGTGGATG +
Preference number: 4 (lower is better)
Translates to: TGELALQAREQEWQQAKAFTRFV*SPNMWM
Trigger: CATCCACATGTTTGGAGACCACACAAACCGGGTGAA...CGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AAACCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGCACTCCAGAATGTGTTaGGCCACATGGGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KPFLKTTGELALQAREQEHSRMC*ATWALW
Trigger: CCACAGCGCCCATGTGGCCCAACACATTCTGGAGTG...CTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTAGGCAGTTGTTGTCCTaGGGGTTGACAGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPRQLLS*GLTVRH
Trigger: GTGCCTCACTGTCAACCCCCAGGACAACAACTGCCT...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp ACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCCGTTGGACACACCGTTaGTGGACATCTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: TGQGEPLPIGNPTPPAAARWTHR*WTSCHS
Trigger: AGAATGGCAAGATGTCCACCAACGGTGTGTCCAACG...GGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGGGTGGTAGCTCTACTTaGGGGCTGACATGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: RRALTNWESHSSCCCQLKGGSST*GLTCPL
Trigger: TAGGGGACATGTCAGCCCCCAAGTAGAGCTACCACC...CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCGGTGGTAGCTCTACTTaGGGGCTGACATGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: AREQEWQQAKASPYQLGIGGSST*GLTCPL
Trigger: TAGGGGACATGTCAGCCCCCAAGTAGAGCTACCACC...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTTGCTGTAAAGCTGAATaGCTTGGGTCCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VATGQGEPLPIGNPTPPACCKAE*LGSTAG
Trigger: GCCAGCAGTGGACCCAAGCCATTCAGCTTTACAGCA...AGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCGGTTTCCATAAAGCATaGCATTGTGAGGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: KTTGELALQAREQEWQQAGFHKA*HCEGPS
Trigger: AGAGGGCCCCTCACAATGCCATGCTTTATGGAAACC...GGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAGTGTGCCTTCAGGTaGCATGGGTTTAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: AKASPYQLGIPLLLLLPAKCAFR*HGFREM
Trigger: CATCTCCCTAAACCCATGCCACCTGAAGGCACACTT...AGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAATCACAAGCGCTGCTGTaGGCCTGCTCCGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQSQALL*ACSGNF
Trigger: GAAATTTCCGGAGCAGGCCCACAGCAGCGCTTGTGA...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCGCACACGGACCAGGTTaGTGGTCTCCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SKSGNRPRRALTNWESHSAHGPG*WSPFPR
Trigger: TCTGGGAAAAGGAGACCACCAACCTGGTCCGTGTGC...GGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000472249.2
CDS-3UTR CCA 90 bp AGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCATGGACTCATCCCCTTaGAGCACACGGACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SKSGNRPRRALTNWESHSMDSSP*STRTRL
Trigger: CAACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCAT...GGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCGCAGTAGCTGGGGTGTaGCTGCAGGCAGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLAVAGV*LQAVDN
Trigger: ATTGTCAACTGCCTGCAGCCACACCCCAGCTACTGC...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp CTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCGAGCCCTTACCAATTaGGAATCCCACTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGSKSGNRPRRALTNWESRALTN*ESHSSC
Trigger: GCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCG...GGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CCA 90 bp GAGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAGCTGGCATGGATGGGTaGGGTAAGGTGCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: EKSHHFFGLCGGSACGMGAGMDG*GKVQCP
Trigger: GGGGCACTGCACCTTACCCCACCCATCCATGCCAGC...TCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAAAAGCTTGGGGCTGCTaGGGAGGGAGGGGCCGAGTA +
Preference number: 4 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGKAWGC*GGRGRV
Trigger: TACTCGGCCCCTCCCTCCCCAGCAGCCCCAAGCTTT...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGAAATGGCAGGTGGCTaGAACACAAGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGEMAGG*NTRKQR
Trigger: CCTTTGCTTTCTTGTGTTCCAGCCACCTGCCATTTC...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
3UTR CAA 72 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATaGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQ*GIPLLLLLPAK
Trigger: TTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR TCA 90 bp TCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGGCAGAACAGTTGACACATCCTaGGTGACCCTGCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLLWSLWRLSMWDGKEGRTVDTS*VTLQLC
Trigger: GCAGAGCTGCAGGGTCACTCAGGATGTGTCAACTGT...TCTGCCCTCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GAAGCTGCCACCTGTGTTGCTGGGATTAAAGCAATGAGATGGTGCCAGACCCCCACAGTTGACACATCCTaGGTGACCCTGCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EAATCVAGIKAMRWCQTPTVDTS*VTLQLC
Trigger: GCAGAGCTGCAGGGTCACTCAGGATGTGTCAACTGT...GGGGGTCTGGCACCATCTCATTGCTTTAATCCCAGCAACACAGGTGGCAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp TGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGCGTGAGGCAGGAACTTaGCAGAGAAGATATTTGCGG +
Preference number: 4 (lower is better)
Translates to: CRLGSKSGNRPRRALTNWREAGT*QRRYLR
Trigger: CCGCAAATATCTTCTCTGTCAAGTTCCTGCCTCACG...CCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCGTGAGGCAGGAACTTaGCAGAGAAGATATTTGCGG +
Preference number: 4 (lower is better)
Translates to: EGRRGLVSGGLIAASSVKREAGT*QRRYLR
Trigger: CCGCAAATATCTTCTCTGTCAAGTTCCTGCCTCACG...CTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp GAGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAATGCGGTCCCCAGCGTaGGGCAGGAACTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: EKSHHFFGLCGGSACGMGMRSPA*GRNLTE
Trigger: CTCTGTCAAGTTCCTGCCTCACGCTGGGGACCGCAT...TCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GAAGCTGCCACCTGTGTTGCTGGGATTAAAGCAATGAGATGGTGCCAGACCCCCCTGTGCCATTGGGGCTaGAGGTCACATAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: EAATCVAGIKAMRWCQTPLCHWG*RSHRWQ
Trigger: TTGCCACCTATGTGACCTTCAGCCCCAATGGCACAG...GGGGGTCTGGCACCATCTCATTGCTTTAATCCCAGCAACACAGGTGGCAGCTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp AAACCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGCGGAAGCCATTGCTATaGAGGTGCAGGCCATTGGAC +
Preference number: 4 (lower is better)
Translates to: KPFLKTTGELALQAREQERKPLL*RCRPLD
Trigger: GTCCAATGGCCTGCACCTTCATAGCAATGGCTTCCG...CTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CTCTGGAGGGAGGGTGGGACCCATCCTTTTTCAAAACCTTTCCTGAAGACCACAGCTCTACTTGGGGGCTaGCATGTCCCCTACTCTCCG +
Preference number: 4 (lower is better)
Translates to: LWREGGTHPFSKPFLKTTALLGG*HVPYSP
Trigger: CGGAGAGTAGGGGACATGTCAGCCCCCAAGTAGAGC...TGTGGTCTTCAGGAAAGGTTTTGAAAAAGGATGGGTCCCACCCTCCCTCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp TTCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAACCGGAAATTTCCCTTTaGAGTCGTCCAGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: FRAGDSQGTISPESESQQPEISL*SRPGTP
Trigger: TGGAGTGCCTGGACGACTTCAAAGGGAAATTTCCGG...TTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCCGGAAATTTCCCTTTaGAGTCGTCCAGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLPEISL*SRPGTP
Trigger: TGGAGTGCCTGGACGACTTCAAAGGGAAATTTCCGG...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCACCATTTCATCCTCTaGGATGGAGTCCTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPHHFIL*DGVLAA
Trigger: AGCCGCAAGGACTCCATCTCAGAGGATGAAATGGTG...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp TTCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAACACCATTTCATCCTCTaGGATGGAGTCCTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: FRAGDSQGTISPESESQQHHFIL*DGVLAA
Trigger: AGCCGCAAGGACTCCATCTCAGAGGATGAAATGGTG...TTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTTCCCACACAATCGTGTaGTGGTCATCGGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPSHTIV*WSSEPE
Trigger: CTCTGGTTCCGATGACCAGCACACGATTGTGTGGGA...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AGGCAGAGCCTCCAGAGGTGGCCAGTGAGAGTAGGTGCAGGGCCAGAGCTAGTATTTACTGTCAGGTCGTaGACATGCACCTTAGAGTCG +
Preference number: 4 (lower is better)
Translates to: RQSLQRWPVRVGAGPELVFTVRS*TCTLES
Trigger: CGACTCTAAGGTGCATGTGCACGACCTGACAGTAAA...TACTAGCTCTGGCCCTGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCTACGTAATACTGGGCTaGACCGTCCGGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: AREQEWQQAKASPYQLGIYVILG*TVRKGF
Trigger: AAACCCCTTCCGGACGGTGCAGCCCAGTATTACGTA...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAACGTTGGTGGACATCTTaGCATTCTGGACTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: KASPYQLGIPLLLLLPAKRWWTS*HSGLPP
Trigger: CGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACG...TTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGATCCCACTCCTCCTGCTaGTGCCAGCTAAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EKSHHFFGLCGGSACGMGSHSSC*CQLKGR
Trigger: CCTGCCCTTTAGCTGGCAGCAGCAGGAGGAGTGGGA...TCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGTGGTGGGTTGATCGCTaGATCCAGTGTAAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LKTTGELALQAREQEWQQWWVDR*IQCKAW
Trigger: CCAAGCTTTACACTGGATGCAGCGATCAACCCACCA...CTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTTGTGTCCCGTGTGCATaGAGAGCAGCTTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTCVPCA*RAASCG
Trigger: ACCACAAGAAGCTGCTCTCCATGCACACGGGACACA...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTGCTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGACTCCAAACATGTGGATaGTCTCCTTTACTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLGREGPSKGLSHLSGSGLQTCG*SPLLSG
Trigger: ACCTGACAGTAAAGGAGACCATCCACATGTTTGGAG...TCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCTTCACCCGGTTTGTGTaGTCTCCAAACATGTGGATG +
Preference number: 4 (lower is better)
Translates to: KTTGELALQAREQEWQQAFTRFV*SPNMWM
Trigger: CATCCACATGTTTGGAGACCACACAAACCGGGTGAA...GGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAAGTCAGGAAGCTTCACTaGCAGGTGACCTGCTACGTA +
Preference number: 4 (lower is better)
Translates to: FLKTTGELALQAREQEWQVRKLH*QVTCYV
Trigger: TACGTAGCAGGTCACCTGCCAGTGAAGCTTCCTGAC...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCACTTCCCCCGAGGAGTaGCATTTTCTAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: AREQEWQQAKASPYQLGITSPEE*HFLGKR
Trigger: CCTCTTGCCTAGAAAATGCCACTCCTCGGGGGAAGT...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000447062.2
CDS-3UTR CCA 90 bp CCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTATGGACACACCGTTGGTaGACATCTTGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: PRRALTNWESHSSCCCQLWTHRW*TSCHSG
Trigger: TCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCA...TAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGTGGACACACCGTTGGTaGACATCTTGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: PFLKTTGELALQAREQEWWTHRW*TSCHSG
Trigger: TCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCA...CCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGGAGGGAAGGCAAAAGCCTCATTaGCTTGCTGTTTCACACGCT +
Preference number: 4 (lower is better)
Translates to: RAPILPLGSALTLVALEGRQKPH*LAVSHA
Trigger: AGCGTGTGAAACAGCAAGCCAATGAGGCTTTTGCCT...TCCCTCCAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAAAGTGTGCCTTCAGGTaGCATGGGTTTAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QAREQEWQQAKASPYQLGKCAFR*HGFREM
Trigger: CATCTCCCTAAACCCATGCCACCTGAAGGCACACTT...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCGCTCTGGAGGGAGGGTaGGACCCATCCTTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LGSKSGNRPRRALTNWESALEGG*DPSFFK
Trigger: TTTGAAAAAGGATGGGTCCCACCCTCCCTCCAGAGC...GGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAACTCTGCCAGGGCCCTTaGGAAAGGCAGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RKAITSLVFVAAQHVGWELCQGP*ERQSLQ
Trigger: CTGGAGGCTCTGCCTTTCCCAAGGGCCCTGGCAGAG...TTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGCTTCTTTGGTCTTTGTaGCGGCTCAGCATGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LKTTGELALQAREQEWQQLLWSL*RLSMWD
Trigger: ATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAG...CTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGGGAGGAAATGGCAGGTaGCTGGAACACAAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: EGRRGLVSGGLIAASSVKGGNGR*LEHKKA
Trigger: TGCTTTCTTGTGTTCCAGCCACCTGCCATTTCCTCC...CTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCTCACCCTCACTCTCCTaGGAGCGGAGCAACAAAAAG +
Preference number: 4 (lower is better)
Translates to: AREQEWQQAKASPYQLGISPSLS*ERSNKK
Trigger: CTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGA...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
3UTR CAA 72 bp TCAAAACCTTTCCTGAAGACCACAGGGGAGCTAGCCTaGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SKPFLKTTGELA*QAREQEWQQAK
Trigger: CTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGGTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
3UTR CAA 72 bp AGCAACAAAAAGGCTCGGCTCCTGGTGAGTGGTGGGTaGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SNKKARLLVSGG*IAASSVKLGAA
Trigger: AGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGAGCCGAGCCTTTTTGTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR TCA 90 bp GAGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGATTAGGGAGATGGCCTTaGGGCAGTCCCTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: EKSHHFFGLCGGSACGMGLGRWP*GSPSGH
Trigger: ATGCCCTGAGGGACTGCCTCAAGGCCATCTCCCTAA...TCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGACCACTGACGATATACTaGGCGTTGCTGCCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: QAREQEWQQAKASPYQLGPLTIY*ALLPKK
Trigger: TTTCTTTGGCAGCAACGCTCAGTATATCGTCAGTGG...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAGACAGAGAAGATATTTaGGGTGTGTCCCGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: QAREQEWQQAKASPYQLGDREDI*GVSRVH
Trigger: ATGCACACGGGACACACCGCAAATATCTTCTCTGTC...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGCCCTCTGCACAGCCTTaGTGTAAAGCTGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWPSAQP*CKAEWL
Trigger: AAGCCATTCAGCTTTACAGCAAGGCTGTGCAGAGGG...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGCGCTTCATGTAGGCTaGTGCTCGGTTTCCATAAAG +
Preference number: 4 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWALHVG*CSVSIK
Trigger: CTTTATGGAAACCGAGCAGCAGCCTACATGAAGCGC...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTGCGCTTCATGTAGGCTaGTGCTCGGTTTCCATAAAG +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTALHVG*CSVSIK
Trigger: CTTTATGGAAACCGAGCAGCAGCCTACATGAAGCGC...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGAATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCGCTTCATGTAGGCTaGTGCTCGGTTTCCATAAAG +
Preference number: 4 (lower is better)
Translates to: ENGRSAEVLAWMGGVRCSALHVG*CSVSIK
Trigger: CTTTATGGAAACCGAGCAGCAGCCTACATGAAGCGC...ACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAATGCATCACAAGCGCTaGTGTGGGCCTGCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGMHHKR*CGPAPE
Trigger: TTCCGGAGCAGGCCCACAGCAGCGCTTGTGATGCAT...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAATGCATCACAAGCGCTaGTGTGGGCCTGCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: EKSHHFFGLCGGSACGMGMHHKR*CGPAPE
Trigger: TTCCGGAGCAGGCCCACAGCAGCGCTTGTGATGCAT...TCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTCTGGAGGGAGGGTGGGACCCATCCTTTTTCAAAACCTTTCCTGAAGACCACAGCACAACAGGATCGATaGCACTGGTGGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LWREGGTHPFSKPFLKTTAQQDR*HWWPGS
Trigger: GCTTCCTGGCCACCAGTGGCATCGATCCTGTTGTGC...TGTGGTCTTCAGGAAAGGTTTTGAAAAAGGATGGGTCCCACCCTCCCTCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGTTCCAAGACCCATCTaGACCCCACAAATGCCACCA +
Preference number: 4 (lower is better)
Translates to: KASPYQLGIPLLLLLPAKVPRPI*TPQMPP
Trigger: TGGTGGCATTTGTGGGGTGCAGATGGGTCTTGGAAC...TTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR CCA 90 bp AAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAATGTGTCCCGTGTGCATaGAGAGCAGCTTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KASPYQLGIPLLLLLPAKCVPCA*RAASCG
Trigger: ACCACAAGAAGCTGCTCTCCATGCACACGGGACACA...TTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTTCATGCTCTTTCTGTaGTTATGGATCATGCGGATG +
Preference number: 4 (lower is better)
Translates to: ELALQAREQEWQQAKASPFMLFL*LWIMRM
Trigger: CATCCGCATGATCCATAACCACAGAAAGAGCATGAA...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGGCAGAGTCAGGAAGCTTCACTaGCAGGTGACCTGCTACGTA +
Preference number: 4 (lower is better)
Translates to: SLLWSLWRLSMWDGKEGRVRKLH*QVTCYV
Trigger: TACGTAGCAGGTCACCTGCCAGTGAAGCTTCCTGAC...TCTGCCCTCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGCGTTGGACACACCGTTaGTGGACATCTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: RRALTNWESHSSCCCQLKRWTHR*WTSCHS
Trigger: AGAATGGCAAGATGTCCACCAACGGTGTGTCCAACG...CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGGTTTCCATAAAGCATaGCATTGTGAGGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: FRAGDSQGTISPESESQQGFHKA*HCEGPS
Trigger: AGAGGGCCCCTCACAATGCCATGCTTTATGGAAACC...TTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTCTGGAGGGAGGGTGGGACCCATCCTTTTTCAAAACCTTTCCTGAAGACCACAGATCGATGCCACTGGTaGCCAGGAAGCAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LWREGGTHPFSKPFLKTTDRCHW*PGSSSW
Trigger: CCAGCTACTGCTTCCTGGCCACCAGTGGCATCGATC...TGTGGTCTTCAGGAAAGGTTTTGAAAAAGGATGGGTCCCACCCTCCCTCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGGCAGATCACCCTCACTCTCCTaGGAGCGGAGCAACAAAAAG +
Preference number: 4 (lower is better)
Translates to: SLLWSLWRLSMWDGKEGRSPSLS*ERSNKK
Trigger: CTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGA...TCTGCCCTCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCATGTCCAGTAGAGGTGTaGTTACTAAGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPCPVEV*LLSHRA
Trigger: AGCTCTATGACTTAGTAACCACACCTCTACTGGACA...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319394.8
3UTR CAA 72 bp CAGAGCAGCAGGGGACAGAGAAAAGCCATCACTTCTTaGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAA +
Preference number: 4 (lower is better)
Translates to: QSSRGQRKAITS*VFVAAQHVGWE
Trigger: TTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTCTGTCCCCTGCTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCAGAAATTGGCCTCTTTaGTATCCGTGGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: AREQEWQQAKASPYQLGIRNWPL*YPWWCC
Trigger: GCAACACCACCACGGATATCAAAGAGGCCAATTTCT...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GAGAATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTAGAAATTGGCCTCTTTaGTATCCGTGGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: ENGRSAEVLAWMGGVRCSRNWPL*YPWWCC
Trigger: GCAACACCACCACGGATATCAAAGAGGCCAATTTCT...ACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTAGAAATTGGCCTCTTTaGTATCCGTGGTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: GARVATGQGEPLPIGNPTRNWPL*YPWWCC
Trigger: GCAACACCACCACGGATATCAAAGAGGCCAATTTCT...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp AGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAACCGCTGGTTGGCCTGTaGAGCACCCTCCATATCTTC +
Preference number: 4 (lower is better)
Translates to: RKAITSLVFVAAQHVGWEPLVGL*STLHIF
Trigger: GAAGATATGGAGGGTGCTTCACAGGCCAACCAGCGG...TTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp GAGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAGGGCAGGACAGTCCCTaGAGACAGTTCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: EKSHHFFGLCGGSACGMGGQDSP*RQFSLF
Trigger: GAACAAGCTGAACTGTCTTCAGGGACTGTCCTGCCC...TCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCGACAGAGAAGATATTTaGGGTGTGTCCCGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: LGSKSGNRPRRALTNWESDREDI*GVSRVH
Trigger: ATGCACACGGGACACACCGCAAATATCTTCTCTGTC...GGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCGACAGAGAAGATATTTaGGGTGTGTCCCGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: AREQEWQQAKASPYQLGIDREDI*GVSRVH
Trigger: ATGCACACGGGACACACCGCAAATATCTTCTCTGTC...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGATGTGGTTATGGATCATaGGGATGTCATAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QAREQEWQQAKASPYQLGCGYGS*GCHRAS
Trigger: TGAGGCTCTATGACATCCGCATGATCCATAACCACA...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGTCACCATCCCACTTaGGCTTCATGTAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGGHHPT*ASCRLL
Trigger: CAGCAGCCTACATGAAGCGCAAGTGGGATGGTGACC...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp AGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAATGCATCACAAGCGCTaGTGTGGGCCTGCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: RKAITSLVFVAAQHVGWEMHHKR*CGPAPE
Trigger: TTCCGGAGCAGGCCCACAGCAGCGCTTGTGATGCAT...TTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGTTCACCCGGTTTGTGTaGTCTCCAAACATGTGGATG +
Preference number: 4 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWFTRFV*SPNMWM
Trigger: CATCCACATGTTTGGAGACCACACAAACCGGGTGAA...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGACATCTTGCCATTCTaGACTTCCCCCGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGDILPF*TSPEEW
Trigger: CCACTCCTCGGGGGAAGTCCAGAATGGCAAGATGTC...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000447062.2
CDS-3UTR CCA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCAGGCAAAAGCCTCATTaGCTTGCTGTTTCACACGCT +
Preference number: 4 (lower is better)
Translates to: AREQEWQQAKASPYQLGIRQKPH*LAVSHA
Trigger: AGCGTGTGAAACAGCAAGCCAATGAGGCTTTTGCCT...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCAGGCAAAAGCCTCATTaGCTTGCTGTTTCACACGCT +
Preference number: 4 (lower is better)
Translates to: LGSKSGNRPRRALTNWESRQKPH*LAVSHA
Trigger: AGCGTGTGAAACAGCAAGCCAATGAGGCTTTTGCCT...GGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAGCTTGGGTCCACTGCTaGCAGGCAAAAGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: EKSHHFFGLCGGSACGMGAWVHC*QAKASL
Trigger: CAATGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGC...TCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGCAGTAGCTGGGGTGTaGCTGCAGGCAGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGAVAGV*LQAVDN
Trigger: ATTGTCAACTGCCTGCAGCCACACCCCAGCTACTGC...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAACTTCTTTGGTCTTTGTaGCGGCTCAGCATGTGGGAT +
Preference number: 4 (lower is better)
Translates to: KASPYQLGIPLLLLLPAKLLWSL*RLSMWD
Trigger: ATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAG...TTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TTCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGAAATGGCAGGTGGCTaGAACACAAGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: FRAGDSQGTISPESESQQEMAGG*NTRKQR
Trigger: CCTTTGCTTTCTTGTGTTCCAGCCACCTGCCATTTC...TTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGAGGCAGGGAGGAAATaGCAGGTGGCTGGAACACAA +
Preference number: 4 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGEAGRK*QVAGTQ
Trigger: TTGTGTTCCAGCCACCTGCCATTTCCTCCCTGCCTC...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp GAGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGATACGTAATACTGGGCTaGACCGTCCGGAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: EKSHHFFGLCGGSACGMGYVILG*TVRKGF
Trigger: AAACCCCTTCCGGACGGTGCAGCCCAGTATTACGTA...TCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGCTTCATGTAGGCTGCTaGTCGGTTTCCATAAAGCAT +
Preference number: 4 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWLHVGC*SVSIKH
Trigger: ATGCTTTATGGAAACCGAGCAGCAGCCTACATGAAG...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp CAGCAAGTTGTAGCAACCTCCACCCCTAACGCCAAACTAACAAACAAAACAGGGGCACAACAGGATCGATaGCACTGGTGGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QQVVATSTPNAKLTNKTGAQQDR*HWWPGS
Trigger: GCTTCCTGGCCACCAGTGGCATCGATCCTGTTGTGC...CCCTGTTTTGTTTGTTAGTTTGGCGTTAGGGGTGGAGGTTGCTACAACTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGCTCCAAACATGTGGATaGTCTCCTTTACTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWLQTCG*SPLLSG
Trigger: ACCTGACAGTAAAGGAGACCATCCACATGTTTGGAG...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CCA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGTTCATGCTCTTTCTGTaGTTATGGATCATGCGGATG +
Preference number: 4 (lower is better)
Translates to: LKTTGELALQAREQEWQQFMLFL*LWIMRM
Trigger: CATCCGCATGATCCATAACCACAGAAAGAGCATGAA...CTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTCTGGAGGGAGGGTGGGACCCATCCTTTTTCAAAACCTTTCCTGAAGACCACAGCTCTGGAGGGAGGGTaGGACCCATCCTTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LWREGGTHPFSKPFLKTTALEGG*DPSFFK
Trigger: TTTGAAAAAGGATGGGTCCCACCCTCCCTCCAGAGC...TGTGGTCTTCAGGAAAGGTTTTGAAAAAGGATGGGTCCCACCCTCCCTCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp AGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAACTTTCCCATCTGAGTaGCTCAGGAGACCCACCCCT +
Preference number: 4 (lower is better)
Translates to: RKAITSLVFVAAQHVGWETFPSE*LRRPTP
Trigger: AGGGGTGGGTCTCCTGAGCCACTCAGATGGGAAAGT...TTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CAGCAAGTTGTAGCAACCTCCACCCCTAACGCCAAACTAACAAACAAAACAGGGGAGAGGCCTGGTGAGTaGTGGGTTGATCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: QQVVATSTPNAKLTNKTGERPGE*WVDRCI
Trigger: GATGCAGCGATCAACCCACCACTCACCAGGCCTCTC...CCCTGTTTTGTTTGTTAGTTTGGCGTTAGGGGTGGAGGTTGCTACAACTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR TCA 90 bp CAGCAAGTTGTAGCAACCTCCACCCCTAACGCCAAACTAACAAACAAAACAGGGTTGACACATCCTGAGTaGCCCTGCAGCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QQVVATSTPNAKLTNKTGLTHPE*PCSSAS
Trigger: GGAAGCAGAGCTGCAGGGTCACTCAGGATGTGTCAA...CCCTGTTTTGTTTGTTAGTTTGGCGTTAGGGGTGGAGGTTGCTACAACTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp TCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGGCAGATGTGGTTATGGATCATaGGGATGTCATAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SLLWSLWRLSMWDGKEGRCGYGS*GCHRAS
Trigger: TGAGGCTCTATGACATCCGCATGATCCATAACCACA...TCTGCCCTCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp CAGCAAGTTGTAGCAACCTCCACCCCTAACGCCAAACTAACAAACAAAACAGGGCACTGGCAGGTGACCTaGTACGTAATACTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QQVVATSTPNAKLTNKTGHWQVT*YVILGC
Trigger: GCAGCCCAGTATTACGTAGCAGGTCACCTGCCAGTG...CCCTGTTTTGTTTGTTAGTTTGGCGTTAGGGGTGGAGGTTGCTACAACTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp TCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGGCAGACTCCAAACATGTGGATaGTCTCCTTTACTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SLLWSLWRLSMWDGKEGRLQTCG*SPLLSG
Trigger: ACCTGACAGTAAAGGAGACCATCCACATGTTTGGAG...TCTGCCCTCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTTTCATGCTCTTTCTGTaGTTATGGATCATGCGGATG +
Preference number: 4 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPFMLFL*LWIMRM
Trigger: CATCCGCATGATCCATAACCACAGAAAGAGCATGAA...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CCA 90 bp CTCTGGAGGGAGGGTGGGACCCATCCTTTTTCAAAACCTTTCCTGAAGACCACAGGTTTCCATAAAGCATaGCATTGTGAGGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LWREGGTHPFSKPFLKTTGFHKA*HCEGPS
Trigger: AGAGGGCCCCTCACAATGCCATGCTTTATGGAAACC...TGTGGTCTTCAGGAAAGGTTTTGAAAAAGGATGGGTCCCACCCTCCCTCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGACCACTGACGATATACTaGGCGTTGCTGCCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGPLTIY*ALLPKK
Trigger: TTTCTTTGGCAGCAACGCTCAGTATATCGTCAGTGG...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR GCA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGATTTACTGTCAGGTCGTaGACATGCACCTTAGAGTCG +
Preference number: 4 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGFTVRS*TCTLES
Trigger: CGACTCTAAGGTGCATGTGCACGACCTGACAGTAAA...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR GCA 90 bp GAGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGATGTGGTTATGGATCATaGGGATGTCATAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: EKSHHFFGLCGGSACGMGCGYGS*GCHRAS
Trigger: TGAGGCTCTATGACATCCGCATGATCCATAACCACA...TCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR TCA 90 bp AAACCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGAAAACAGCCAGAGAGTaGAAGCTGATGATTACAAAT +
Preference number: 4 (lower is better)
Translates to: KPFLKTTGELALQAREQEKTARE*KLMITN
Trigger: ATTTGTAATCATCAGCTTTCACTCTCTGGCTGTTTT...CTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR GCA 90 bp AGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAACTTCATGTAGGCTGCTaGTCGGTTTCCATAAAGCAT +
Preference number: 4 (lower is better)
Translates to: RKAITSLVFVAAQHVGWELHVGC*SVSIKH
Trigger: ATGCTTTATGGAAACCGAGCAGCAGCCTACATGAAG...TTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 90 bp AGCTTCGCTCCCGCAGCACCATTTCATCCTCTGAGATGGAGTCCTTaGGGCTCGTGCTGCGGAGGCGGACTGGGGCGCCGCCACCAGGTC +
Preference number: 5 (lower is better)
Translates to: SFAPAAPFHPLRWSP*GSCCGGGLGRRHQV
Trigger: GACCTGGTGGCGGCGCCCCAGTCCGCCTCCGCAGCACGAGCCGCAAGGACTCCATCTCAGAGGATGAAATGGTGCTGCGGGAGCGAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 90 bp CCCGCAGCACCATTTCATCCTCTGAGATGGAGTCCTTGCGGCTCGTaGTGCGGAGGCGGACTGGGGCGCCGCCACCAGGTCCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PAAPFHPLRWSPCGS*CGGGLGRRHQVPSS
Trigger: AGAAGAAGGGACCTGGTGGCGGCGCCCCAGTCCGCCTCCGCAGCACGAGCCGCAAGGACTCCATCTCAGAGGATGAAATGGTGCTGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp CTCACGAAGGGCCCGCTGGCCCCAACTGCCAGGCAGTTGTTGTCCTaGGGGTTGACAGTGAGGCACTTGGCCTCCACCAGCTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: LTKGPLAPTARQLLS*GLTVRHLASTSWPQ
Trigger: CTGTGGCCAGCTGGTGGAGGCCAAGTGCCTCACTGTCAACCCCCAGGACAACAACTGCCTGGCAGTTGGGGCCAGCGGGCCCTTCGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS-3UTR CAA 90 bp GGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCGCAGGTGGCCTGGTCTaGCCCACTCCAGGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: GQGEPLPIGNPTPPAAASAGGLV*PTPGLP
Trigger: TGGGAGCCCTGGAGTGGGCAAGACCAGGCCACCTGC...GCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 90 bp GCAGCACCATTTCATCCTCTGAGATGGAGTCCTTGCGGCTCGTGCTaGGGAGGCGGACTGGGGCGCCGCCACCAGGTCCCTTCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: AAPFHPLRWSPCGSC*GGGLGRRHQVPSSP
Trigger: AGGAGAAGAAGGGACCTGGTGGCGGCGCCCCAGTCCGCCTCCGCAGCACGAGCCGCAAGGACTCCATCTCAGAGGATGAAATGGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS-3UTR CAA 90 bp GGGCAGAGAAGGGCCCTTAGCAGGAAGCGCCACCTCAGCAGAGTAGGCCTGGCTTTCATGCGCCGCTGGTaGGCCTGTGAAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: GQRRALSRKRHLSRVGLAFMRRW*ACEAPS
Trigger: GGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGAA...AGCCAGGCCTACTCTGCTGAGGTGGCGCTTCCTGCTAAGGGCCCTTCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp TTGCGTCACCCTCACTCTCCTGGGAGCGGAGCAACAAAAAGGCTCGGCTCCTGGGCAGGTGGCCTGGTCTaGCCCACTCCAGGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LRHPHSPGSGATKRLGSWAGGLV*PTPGLP
Trigger: TGGGAGCCCTGGAGTGGGCAAGACCAGGCCACCTGC...CCAGGAGCCGAGCCTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGACGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS GCA 90 bp CTTCACTCTCTGGTCGGGGGTTCCAGAGCCGCACAACAGGATCGATaGCACTGGTGGCCAGGAAGCAGTAGCTGGGGTGTGGCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: LHSLVGGSRAAQQDR*HWWPGSSSWGVAAG
Trigger: GCCTGCAGCCACACCCCAGCTACTGCTTCCTGGCCACCAGTGGCATCGATCCTGTTGTGCGGCTCTGGAACCCCCGACCAGAGAGTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS-3UTR CAA 90 bp CCCGGCACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATTTGTTGTCCTGGGGGTaGACAGTGAGGCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: PGTPTAQARDPVAHVEQHLLSWG*TVRHLA
Trigger: GGCCAAGTGCCTCACTGTCAACCCCCAGGACAACAA...ATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGTGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CAA 90 bp ACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATCACCTCTCTGAGATGGAGTCCTaGCGGCTCGTGCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: TPTAQARDPVAHVEQHHLSEMES*RLVLRR
Trigger: CCTCCGCAGCACGAGCCGCAAGGACTCCATCTCAGA...GAGGTGATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CAA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCAGGTGGCCTGGTCTaGCCCACTCCAGGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LKTTGELALQAREQEWQQAGGLV*PTPGLP
Trigger: TGGGAGCCCTGGAGTGGGCAAGACCAGGCCACCTGC...CTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 90 bp CATGCGGATGTCATAGAGCCTCACGAAGGGCCCGCTGGCCCCAACTaGCAGGCAGTTGTTGTCCTGGGGGTTGACAGTGAGGCACTTGGC +
Preference number: 5 (lower is better)
Translates to: HADVIEPHEGPAGPN*QAVVVLGVDSEALG
Trigger: GCCAAGTGCCTCACTGTCAACCCCCAGGACAACAACTGCCTGGCAGTTGGGGCCAGCGGGCCCTTCGTGAGGCTCTATGACATCCGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS-3UTR CAA 90 bp CTGGGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACATGGAGAGCAGCTTCTaGTGGTGCAGCGGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: LGREGPSKGLSHLSGSGDMESSF*WCSGSH
Trigger: GTGGGACCCGCTGCACCACAAGAAGCTGCTCTCCAT...GTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GGGCAGAGAAGGGCCCTTAGCAGGAAGCGCCACCTCAGCAGAGTAGGCCTGGCTTTGTTGTCCTGGGGGTaGACAGTGAGGCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: GQRRALSRKRHLSRVGLALLSWG*TVRHLA
Trigger: GGCCAAGTGCCTCACTGTCAACCCCCAGGACAACAA...AGCCAGGCCTACTCTGCTGAGGTGGCGCTTCCTGCTAAGGGCCCTTCTCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp CACTCCAGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGTTCATGCGCCGCTGGTaGGCCTGTGAAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: HSRAPILPLGSALTLVALFMRRW*ACEAPS
Trigger: GGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGAA...CAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 90 bp TCTCTGAAACCATTATGCCCCAACACTCCCCACTCAACCTCCCGCTaGCAACTGGGCTGCACCCTCCTCTTCAGGGCCTCGGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: SLKPLCPNTPHSTSR*QLGCTLLFRASDLP
Trigger: TGGCAGGTCCGAGGCCCTGAAGAGGAGGGTGCAGCCCAGTTGGCAGCGGGAGGTTGAGTGGGGAGTGTTGGGGCATAATGGTTTCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS-3UTR CAA 90 bp TGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGGGCTGCTGGGGAGGGAGGATGGAGAGCAGCTTCTaGTGGTGCAGCGGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: WWVDRCIQCKAWGCWGGRMESSF*WCSGSH
Trigger: GTGGGACCCGCTGCACCACAAGAAGCTGCTCTCCAT...CCTCCCTCCCCAGCAGCCCCAAGCTTTACACTGGATGCAGCGATCAACCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCATTTAGGGAGATGGCCTaGAGGCAGTCCCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPFREMA*RQSLRA
Trigger: TGCCCTGAGGGACTGCCTCAAGGCCATCTCCCTAAA...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp CCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGTCTGAGATGGAGTCCTaGCGGCTCGTGCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: PFLKTTGELALQAREQEWSEMES*RLVLRR
Trigger: CCTCCGCAGCACGAGCCGCAAGGACTCCATCTCAGA...CCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp TCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGTCTGAGATGGAGTCCTaGCGGCTCGTGCTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: SGLGIVRGQSAQSPKASKSEMES*RLVLRR
Trigger: CCTCCGCAGCACGAGCCGCAAGGACTCCATCTCAGA...CTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp CCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGTTCATGCGCCGCTGGTaGGCCTGTGAAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: PFLKTTGELALQAREQEWFMRRW*ACEAPS
Trigger: GGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGAA...CCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CAA 90 bp AGGCAGAGCCTCCAGAGGTGGCCAGTGAGAGTAGGTGCAGGGCCAGAGCTAGTAACAGGGGAGCTAGCCTaGCAGGCTAGGGAGCAAGAG +
Preference number: 5 (lower is better)
Translates to: RQSLQRWPVRVGAGPELVTGELA*QAREQE
Trigger: CTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGT...TACTAGCTCTGGCCCTGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS TCA 90 bp GGGCTGACATGTCCCCTACTCTCCGGCAGCCGGAAGCCATTGCTATaGAGGTGCAGGCCATTGGACACACCGTTGGACACACCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GLTCPLLSGSRKPLL*RCRPLDTPLDTPLV
Trigger: CACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACCTTCATAGCAATGGCTTCCGGCTGCCGGAGAGTAGGGGACATGTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 90 bp GCTGTGATGTCGCGGCCCAATGCATCACAAGCGCTGCTGTGGGCCTaGTCCGGAAATTTCCCTTTGAAGTCGTCCAGGCACTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: AVMSRPNASQALLWA*SGNFPLKSSRHSRA
Trigger: AGCCCTGGAGTGCCTGGACGACTTCAAAGGGAAATTTCCGGAGCAGGCCCACAGCAGCGCTTGTGATGCATTGGGCCGCGACATCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp TTGAGCTCAAAGAGGCAGCGGGCCAGGCGAAAGTGTGCCTTCAGGTaGCATGGGTTTAGGGAGATGGCCTTGAGGCAGTCCCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LSSKRQRARRKCAFR*HGFREMALRQSLRA
Trigger: TGCCCTGAGGGACTGCCTCAAGGCCATCTCCCTAAACCCATGCCACCTGAAGGCACACTTTCGCCTGGCCCGCTGCCTCTTTGAGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS-3UTR CAA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAAAGGGCACCCCGCTCCTaGATCTGCCTACGGATGAGG +
Preference number: 5 (lower is better)
Translates to: FLKTTGELALQAREQEWQRAPRS*ICLRMR
Trigger: CCTCATCCGTAGGCAGATCAAGGAGCGGGGTGCCCT...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGATTGACAGTGAGGCACTaGGCCTCCACCAGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: QAREQEWQQAKASPYQLGLTVRH*ASTSWP
Trigger: TGGCCAGCTGGTGGAGGCCAAGTGCCTCACTGTCAA...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTGTAAAGCTGAATGGCTaGGGTCCACTGCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: AKASPYQLGIPLLLLLPAVKLNG*GPLLAG
Trigger: GCCTGCCAGCAGTGGACCCAAGCCATTCAGCTTTAC...AGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp CACTCCAGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGAGCACACGGACCAGGTaGGTGGTCTCCTTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: HSRAPILPLGSALTLVALSTRTR*VVSFSQ
Trigger: CTGGGAAAAGGAGACCACCAACCTGGTCCGTGTGCT...CAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCTGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CAA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCAAATGGACTCATCCCCTaGGAGCACACGGACCAGGTT +
Preference number: 5 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPNGLIP*EHTDQV
Trigger: AACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCATT...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp AGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTTCATGCGCCGCTGGTaGGCCTGTGAAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: SKSGNRPRRALTNWESHSFMRRW*ACEAPS
Trigger: GGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGAA...GGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CAA 90 bp AGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGGAGGGAGCGAGCCCTTACCAATaGGGAATCCCACTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: RAPILPLGSALTLVALEGASPYQ*GIPLLL
Trigger: CAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGC...TCCCTCCAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp AGGCAGAGCCTCCAGAGGTGGCCAGTGAGAGTAGGTGCAGGGCCAGAGCTAGTAGCGAGCCCTTACCAATaGGGAATCCCACTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: RQSLQRWPVRVGAGPELVASPYQ*GIPLLL
Trigger: CAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGC...TACTAGCTCTGGCCCTGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp TTGCGTCACCCTCACTCTCCTGGGAGCGGAGCAACAAAAAGGCTCGGCTCCTGGGCGAGCCCTTACCAATaGGGAATCCCACTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: LRHPHSPGSGATKRLGSWASPYQ*GIPLLL
Trigger: CAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGC...CCAGGAGCCGAGCCTTTTTGTTGCTCCGCTCCCAGGAGAGTGAGGGTGACGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CAA 90 bp GGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGTTGTAGCAACCTCCACCCCACAGGGGAGCTAGCCTaGCAGGCTAGGGAGCAAGAG +
Preference number: 5 (lower is better)
Translates to: GDNQPRVRKPASCSNLHPTGELA*QAREQE
Trigger: CTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGT...GGGGTGGAGGTTGCTACAACTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS TCA 90 bp CATCACCTCCAACGGGTCTGCATTCATGCGCCGCTGGTTGGCCTGTaGAGCACCCTCCATATCTTCCACGACTCGGCCTGTGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: HHLQRVCIHAPLVGL*STLHIFHDSACEVF
Trigger: GAAGACCTCACAGGCCGAGTCGTGGAAGATATGGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGAATGCAGACCCGTTGGAGGTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS GCA 90 bp GGTCTCCTTTACTGTCAGGTCGTGCACATGCACCTTAGAGTCGGCTaGCCCCGTGATCAAGATGCGGTCCCCAGCGTGAGGCAGGAACTT +
Preference number: 5 (lower is better)
Translates to: GLLYCQVVHMHLRVG*PRDQDAVPSVRQEL
Trigger: AAGTTCCTGCCTCACGCTGGGGACCGCATCTTGATCACGGGGGCAGCCGACTCTAAGGTGCATGTGCACGACCTGACAGTAAAGGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 90 bp TGGGCTGCACCGTCCGGAAGGGGTTTCTGCCGGTCACAGAAGGTGTaGACACCCGCTGAAGGGCTCTGCTTCATGCTCTTTCTGTGGTTA +
Preference number: 5 (lower is better)
Translates to: WAAPSGRGFCRSQKV*TPAEGLCFMLFLWL
Trigger: TAACCACAGAAAGAGCATGAAGCAGAGCCCTTCAGCGGGTGTGCACACCTTCTGTGACCGGCAGAAACCCCTTCCGGACGGTGCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp AACAGGATCGATGCCACTGGTGGCCAGGAAGCAGTAGCTGGGGTGTaGCTGCAGGCAGTTGACAATGGACTCATCCCCTTGGAGCACACG +
Preference number: 5 (lower is better)
Translates to: NRIDATGGQEAVAGV*LQAVDNGLIPLEHT
Trigger: CGTGTGCTCCAAGGGGATGAGTCCATTGTCAACTGCCTGCAGCCACACCCCAGCTACTGCTTCCTGGCCACCAGTGGCATCGATCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS CCA 90 bp GCCGGAAGCCATTGCTATGAAGGTGCAGGCCATTGGACACACCGTTaGACACACCGTTGGTGGACATCTTGCCATTCTGGACCCCCGAGG +
Preference number: 5 (lower is better)
Translates to: AGSHCYEGAGHWTHR*THRWWTSCHSGPPR
Trigger: CCTCGGGGGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACCTTCATAGCAATGGCTTCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361771.7
CDS-3UTR CAA 90 bp AAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAAGGGCACCCCGCTCCTaGATCTGCCTACGGATGAGG +
Preference number: 5 (lower is better)
Translates to: KASPYQLGIPLLLLLPAKRAPRS*ICLRMR
Trigger: CCTCATCCGTAGGCAGATCAAGGAGCGGGGTGCCCT...TTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGTTGACAGTGAGGCACTaGGCCTCCACCAGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: RRALTNWESHSSCCCQLKLTVRH*ASTSWP
Trigger: TGGCCAGCTGGTGGAGGCCAAGTGCCTCACTGTCAA...CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp TCAGGGCTGGGGATAGTCAGGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGGTAAAGCTGAATGGCTaGGGTCCACTGCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: SGLGIVRGQSAQSPKASKVKLNG*GPLLAG
Trigger: GCCTGCCAGCAGTGGACCCAAGCCATTCAGCTTTAC...CTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCCTGACTATCCCCAGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp AAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCGCTTCAGCCACATACTaGAGCTCAAAGAGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: KTTGELALQAREQEWQQAASATY*SSKRQR
Trigger: CCGCTGCCTCTTTGAGCTCAAGTATGTGGCTGAAGC...GGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGAGCACACGGACCAGGTaGGTGGTCTCCTTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: LKTTGELALQAREQEWQQSTRTR*VVSFSQ
Trigger: CTGGGAAAAGGAGACCACCAACCTGGTCCGTGTGCT...CTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000472249.2
CDS-3UTR CAA 90 bp CACTCCAGGGCTCCCATCCTTCCTTTGGGCTCCGCTCTAACACTGGTGGCTCTGTGTGGCTGCAGGCAGTaGACAATGGACTCATCCCCT +
Preference number: 5 (lower is better)
Translates to: HSRAPILPLGSALTLVALCGCRQ*TMDSSP
Trigger: AGGGGATGAGTCCATTGTCAACTGCCTGCAGCCACA...CAGAGCCACCAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGCCCTGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp AGGGCAGGACAGTCCCTGAAGACAGTTCAGCTTGTTCCCCTGACCTCCTGCCCAGCGAGCCCTTACCAATaGGGAATCCCACTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: RAGQSLKTVQLVPLTSCPASPYQ*GIPLLL
Trigger: CAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGC...TGGGCAGGAGGTCAGGGGAACAAGCTGAACTGTCTTCAGGGACTGTCCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472249.2
CDS-3UTR CAA 90 bp AGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCACAGGGGAGCTAGCCTaGCAGGCTAGGGAGCAAGAG +
Preference number: 5 (lower is better)
Translates to: SKSGNRPRRALTNWESHSTGELA*QAREQE
Trigger: CTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGT...GGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CAA 90 bp GAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGGCTCCCATCCTTCCTTaGGGCTCCGCTCTAACACTG +
Preference number: 5 (lower is better)
Translates to: EGRRGLVSGGLIAASSVKAPILP*GSALTL
Trigger: CAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGC...CTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CAA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCTCCCATCCTTCCTTaGGGCTCCGCTCTAACACTG +
Preference number: 5 (lower is better)
Translates to: LKTTGELALQAREQEWQQAPILP*GSALTL
Trigger: CAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGC...CTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCATCACTTCTTTGGTCTTaGTGGCGGCTCAGCATGTGG +
Preference number: 5 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPSLLWS*WRLSMW
Trigger: CCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp AGGCAGAGCCTCCAGAGGTGGCCAGTGAGAGTAGGTGCAGGGCCAGAGCTAGTACTGGTGAGTGGTGGGTaGATCGCTGCATCCAGTGTA +
Preference number: 5 (lower is better)
Translates to: RQSLQRWPVRVGAGPELVLVSGG*IAASSV
Trigger: TACACTGGATGCAGCGATCAACCCACCACTCACCAG...TACTAGCTCTGGCCCTGCACCTACTCTCACTGGCCACCTCTGGAGGCTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GAGAATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTCCGTTGGTGGACATCTaGCCATTCTGGACCCCCGAG +
Preference number: 5 (lower is better)
Translates to: ENGRSAEVLAWMGGVRCSPLVDI*PFWTPE
Trigger: CTCGGGGGTCCAGAATGGCAAGATGTCCACCAACGG...ACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361771.7
CDS TCA 90 bp GGCGAAAGTGTGCCTTCAGGTGGCATGGGTTTAGGGAGATGGCCTTaGGGCAGTCCCTCAGGGCATCATAGTGGTCACCATCCCACTTGC +
Preference number: 5 (lower is better)
Translates to: GESVPSGGMGLGRWP*GSPSGHHSGHHPTC
Trigger: GCAAGTGGGATGGTGACCACTATGATGCCCTGAGGGACTGCCTCAAGGCCATCTCCCTAAACCCATGCCACCTGAAGGCACACTTTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 90 bp CAGCAGCACTCCAGAATGTGTTGGGCCACATGGGCGCTGTGGCGATaGGCTTCACCCGGTTTGTGTGGTCTCCAAACATGTGGATGGTCT +
Preference number: 5 (lower is better)
Translates to: QQHSRMCWATWALWR*ASPGLCGLQTCGWS
Trigger: AGACCATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATCGCCACAGCGCCCATGTGGCCCAACACATTCTGGAGTGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp TTGGGCCACATGGGCGCTGTGGCGATGCGCTTCACCCGGTTTGTGTaGTCTCCAAACATGTGGATGGTCTCCTTTACTGTCAGGTCGTGC +
Preference number: 5 (lower is better)
Translates to: LGHMGAVAMRFTRFV*SPNMWMVSFTVRSC
Trigger: GCACGACCTGACAGTAAAGGAGACCATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATCGCCACAGCGCCCATGTGGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp CATCCTCAGCAGCACTCCAGAATGTGTTGGGCCACATGGGCGCTGTaGCGATGCGCTTCACCCGGTTTGTGTGGTCTCCAAACATGTGGA +
Preference number: 5 (lower is better)
Translates to: HPQQHSRMCWATWAL*RCASPGLCGLQTCG
Trigger: TCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATCGCCACAGCGCCCATGTGGCCCAACACATTCTGGAGTGCTGCTGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp ATGTTGAGCAGCATCACCTCCAACGGGTCTGCATTCATGCGCCGCTaGTTGGCCTGTGAAGCACCCTCCATATCTTCCACGACTCGGCCT +
Preference number: 5 (lower is better)
Translates to: MLSSITSNGSAFMRR*LACEAPSISSTTRP
Trigger: AGGCCGAGTCGTGGAAGATATGGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGAATGCAGACCCGTTGGAGGTGATGCTGCTCAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS-3UTR CAA 90 bp GAAGCTGCCACCTGTGTTGCTGGGATTAAAGCAATGAGATGGTGCCAGACCCCCTTGACAGTGAGGCACTaGGCCTCCACCAGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: EAATCVAGIKAMRWCQTPLTVRH*ASTSWP
Trigger: TGGCCAGCTGGTGGAGGCCAAGTGCCTCACTGTCAA...GGGGGTCTGGCACCATCTCATTGCTTTAATCCCAGCAACACAGGTGGCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CAA 90 bp GCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTTTGTTGTCCTGGGGGTaGACAGTGAGGCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: ARVATGQGEPLPIGNPTPLLSWG*TVRHLA
Trigger: GGCCAAGTGCCTCACTGTCAACCCCCAGGACAACAA...AGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GGCAGAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAAGCCTCATTGGCTaGCTGTTTCACACGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GRGEERPGEWWVDRCIQCKSLIG*LFHTLQ
Trigger: CTGGAGCGTGTGAAACAGCAAGCCAATGAGGCTTTT...ACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CAA 90 bp ACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATCACCTCAAAAGCCTCATTGGCTaGCTGTTTCACACGCTCCAG +
Preference number: 5 (lower is better)
Translates to: TPTAQARDPVAHVEQHHLKSLIG*LFHTLQ
Trigger: CTGGAGCGTGTGAAACAGCAAGCCAATGAGGCTTTT...GAGGTGATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS-3UTR CAA 90 bp GCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTCAGGCAAAAGCCTCATaGGCTTGCTGTTTCACACGC +
Preference number: 5 (lower is better)
Translates to: AKASPYQLGIPLLLLLPAQAKAS*ACCFTR
Trigger: GCGTGTGAAACAGCAAGCCAATGAGGCTTTTGCCTG...AGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp TTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAAGTAAAGCTGAATGGCTaGGGTCCACTGCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: FLKTTGELALQAREQEWQVKLNG*GPLLAG
Trigger: GCCTGCCAGCAGTGGACCCAAGCCATTCAGCTTTAC...TTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTTTTAGGGAGATGGCCTaGAGGCAGTCCCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: GARVATGQGEPLPIGNPTFREMA*RQSLRA
Trigger: TGCCCTGAGGGACTGCCTCAAGGCCATCTCCCTAAA...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTAGCACACGGACCAGGTaGGTGGTCTCCTTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: GARVATGQGEPLPIGNPTSTRTR*VVSFSQ
Trigger: CTGGGAAAAGGAGACCACCAACCTGGTCCGTGTGCT...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000472249.2
CDS-3UTR CAA 90 bp CTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGAATGGACTCATCCCCTaGGAGCACACGGACCAGGTT +
Preference number: 5 (lower is better)
Translates to: LKTTGELALQAREQEWQQNGLIP*EHTDQV
Trigger: AACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCATT...CTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CAA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGATGTGGCTGCAGGCAGTaGACAATGGACTCATCCCCT +
Preference number: 5 (lower is better)
Translates to: QAREQEWQQAKASPYQLGCGCRQ*TMDSSP
Trigger: AGGGGATGAGTCCATTGTCAACTGCCTGCAGCCACA...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CAA 90 bp GCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCGCTCCCATCCTTCCTTaGGGCTCCGCTCTAACACTG +
Preference number: 5 (lower is better)
Translates to: AREQEWQQAKASPYQLGIAPILP*GSALTL
Trigger: CAGTGTTAGAGCGGAGCCCAAAGGAAGGATGGGAGC...GATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp ACCCCCACTGCTCAGGCCCGTGATCCGGTAGCCCATGTTGAGCAGCATCACCTCAAAGCCATCACTTCTTaGGTCTTTGTGGCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: TPTAQARDPVAHVEQHHLKAITS*VFVAAQ
Trigger: CTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT...GAGGTGATGCTGCTCAACATGGGCTACCGGATCACGGGCCTGAGCAGTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS TCA 90 bp GTCCGGAAGGGGTTTCTGCCGGTCACAGAAGGTGTGCACACCCGCTaGAGGGCTCTGCTTCATGCTCTTTCTGTGGTTATGGATCATGCG +
Preference number: 5 (lower is better)
Translates to: VRKGFLPVTEGVHTR*RALLHALSVVMDHA
Trigger: CGCATGATCCATAACCACAGAAAGAGCATGAAGCAGAGCCCTTCAGCGGGTGTGCACACCTTCTGTGACCGGCAGAAACCCCTTCCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS TCA 90 bp CCCTCCTCTTCAGGGCCTCGGACCTGCCAAAGAAATTGGCCTCTTTaGTATCCGTGGTGGTGTTGCAGTGGCCGCAGTAGCGGAACTGAT +
Preference number: 5 (lower is better)
Translates to: PSSSGPRTCQRNWPL*YPWWCCSGRSSGTD
Trigger: ATCAGTTCCGCTACTGCGGCCACTGCAACACCACCACGGATATCAAAGAGGCCAATTTCTTTGGCAGGTCCGAGGCCCTGAAGAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS GCA 90 bp ATATTTGCGGTGTGTCCCGTGTGCATGGAGAGCAGCTTCTTGTGGTaGAGCGGGTCCCACACAATCGTGTGCTGGTCATCGGAACCAGAG +
Preference number: 5 (lower is better)
Translates to: IFAVCPVCMESSFLW*SGSHTIVCWSSEPE
Trigger: CTCTGGTTCCGATGACCAGCACACGATTGTGTGGGACCCGCTGCACCACAAGAAGCTGCTCTCCATGCACACGGGACACACCGCAAATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS CCA 90 bp TTGTTGTCCTGGGGGTTGACAGTGAGGCACTTGGCCTCCACCAGCTaGCCACAGTACTCTGTCAGGTCAATCAGCACCTCCGAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: LLSWGLTVRHLASTS*PQYSVRSISTSECL
Trigger: CAAACACTCGGAGGTGCTGATTGACCTGACAGAGTACTGTGGCCAGCTGGTGGAGGCCAAGTGCCTCACTGTCAACCCCCAGGACAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp TGGCATTGTGAGGGGCCCTCTGCACAGCCTTGCTGTAAAGCTGAATaGCTTGGGTCCACTGCTGGCAGGCAAAAGCCTCATTGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: WHCEGPSAQPCCKAE*LGSTAGRQKPHWLA
Trigger: AGCAAGCCAATGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGCCATTCAGCTTTACAGCAAGGCTGTGCAGAGGGCCCCTCACAATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS-3UTR CAA 90 bp AATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCCTGCGCTTCACCCGGTTaGTGTGGTCTCCAAACATGT +
Preference number: 5 (lower is better)
Translates to: NGRSAEVLAWMGGVRCSACASPG*CGLQTC
Trigger: ACATGTTTGGAGACCACACAAACCGGGTGAAGCGCA...GGCACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTTGCGCTTCACCCGGTTaGTGTGGTCTCCAAACATGT +
Preference number: 5 (lower is better)
Translates to: VATGQGEPLPIGNPTPPACASPG*CGLQTC
Trigger: ACATGTTTGGAGACCACACAAACCGGGTGAAGCGCA...AGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGTTGTAGCAACCTCCACCCCAGCACCTCCGAGTGTTaGCTGTTCTCTCGAAGGTCA +
Preference number: 5 (lower is better)
Translates to: GDNQPRVRKPASCSNLHPSTSEC*LFSRRS
Trigger: TGACCTTCGAGAGAACAGCAAACACTCGGAGGTGCT...GGGGTGGAGGTTGCTACAACTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp CCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAGGCAAAAGCCTCATaGGCTTGCTGTTTCACACGC +
Preference number: 5 (lower is better)
Translates to: PFLKTTGELALQAREQEWQAKAS*ACCFTR
Trigger: GCGTGTGAAACAGCAAGCCAATGAGGCTTTTGCCTG...CCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GAAGCTGCCACCTGTGTTGCTGGGATTAAAGCAATGAGATGGTGCCAGACCCCCTTTAGGGAGATGGCCTaGAGGCAGTCCCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: EAATCVAGIKAMRWCQTPFREMA*RQSLRA
Trigger: TGCCCTGAGGGACTGCCTCAAGGCCATCTCCCTAAA...GGGGGTCTGGCACCATCTCATTGCTTTAATCCCAGCAACACAGGTGGCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CAA 90 bp GAGAATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTGCTTCAGCCACATACTaGAGCTCAAAGAGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: ENGRSAEVLAWMGGVRCSASATY*SSKRQR
Trigger: CCGCTGCCTCTTTGAGCTCAAGTATGTGGCTGAAGC...ACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTAATGGACTCATCCCCTaGGAGCACACGGACCAGGTT +
Preference number: 5 (lower is better)
Translates to: GARVATGQGEPLPIGNPTNGLIP*EHTDQV
Trigger: AACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCATT...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CAA 90 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGTGTGGCTGCAGGCAGTaGACAATGGACTCATCCCCT +
Preference number: 5 (lower is better)
Translates to: RRALTNWESHSSCCCQLKCGCRQ*TMDSSP
Trigger: AGGGGATGAGTCCATTGTCAACTGCCTGCAGCCACA...CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
CDS-3UTR CAA 90 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGCTGGTGAGTGGTGGGTaGATCGCTGCATCCAGTGTA +
Preference number: 5 (lower is better)
Translates to: RRALTNWESHSSCCCQLKLVSGG*IAASSV
Trigger: TACACTGGATGCAGCGATCAACCCACCACTCACCAG...CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp AAACCTTTCCTGAAGACCACAGGGGAGCTAGCCTTGCAGGCTAGGGAGCAAGAGCCAGGTGCCCTCACTTaGGTTCCAAGACCCATCTGC +
Preference number: 5 (lower is better)
Translates to: KPFLKTTGELALQAREQEPGALT*VPRPIC
Trigger: GCAGATGGGTCTTGGAACCAAAGTGAGGGCACCTGG...CTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGTGGTCTTCAGGAAAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR CAA 90 bp TCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGGCAGAAGCACACGGACCAGGTaGGTGGTCTCCTGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: SLLWSLWRLSMWDGKEGRSTRTR*VVSCQR
Trigger: TCTTTGGCAGGAGACCACCAACCTGGTCCGTGTGCT...TCTGCCCTCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS GCA 90 bp TCTCCAAACATGTGGATGGTCTCCTTTACTGTCAGGTCGTGCACATaGACCTTAGAGTCGGCTGCCCCCGTGATCAAGATGCGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: SPNMWMVSFTVRSCT*TLESAAPVIKMRSP
Trigger: TGGGGACCGCATCTTGATCACGGGGGCAGCCGACTCTAAGGTGCATGTGCACGACCTGACAGTAAAGGAGACCATCCACATGTTTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 90 bp GTGTGGTCTCCAAACATGTGGATGGTCTCCTTTACTGTCAGGTCGTaGACATGCACCTTAGAGTCGGCTGCCCCCGTGATCAAGATGCGG +
Preference number: 5 (lower is better)
Translates to: VWSPNMWMVSFTVRS*TCTLESAAPVIKMR
Trigger: CCGCATCTTGATCACGGGGGCAGCCGACTCTAAGGTGCATGTGCACGACCTGACAGTAAAGGAGACCATCCACATGTTTGGAGACCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 90 bp GGCATCATAGTGGTCACCATCCCACTTGCGCTTCATGTAGGCTGCTaGTCGGTTTCCATAAAGCATGGCATTGTGAGGGGCCCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: GIIVVTIPLALHVGC*SVSIKHGIVRGPLH
Trigger: GTGCAGAGGGCCCCTCACAATGCCATGCTTTATGGAAACCGAGCAGCAGCCTACATGAAGCGCAAGTGGGATGGTGACCACTATGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp AAGATATTTGCGGTGTGTCCCGTGTGCATGGAGAGCAGCTTCTTGTaGTGCAGCGGGTCCCACACAATCGTGTGCTGGTCATCGGAACCA +
Preference number: 5 (lower is better)
Translates to: KIFAVCPVCMESSFL*CSGSHTIVCWSSEP
Trigger: TGGTTCCGATGACCAGCACACGATTGTGTGGGACCCGCTGCACCACAAGAAGCTGCTCTCCATGCACACGGGACACACCGCAAATATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS CCA 90 bp TGCTATGAAGGTGCAGGCCATTGGACACACCGTTGGACACACCGTTaGTGGACATCTTGCCATTCTGGACTTCCCCCGAGGAGTGGCATT +
Preference number: 5 (lower is better)
Translates to: CYEGAGHWTHRWTHR*WTSCHSGLPPRSGI
Trigger: AATGCCACTCCTCGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACCTTCATAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp TACTCTCCGGCAGCCGGAAGCCATTGCTATGAAGGTGCAGGCCATTaGACACACCGTTGGACACACCGTTGGTGGACATCTTGCCATTCT +
Preference number: 5 (lower is better)
Translates to: YSPAAGSHCYEGAGH*THRWTHRWWTSCHS
Trigger: AGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACCTTCATAGCAATGGCTTCCGGCTGCCGGAGAGTA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp TGCTATGAAGGTGCAGGCCATTGGACACACCGTTGGACACACCGTTaGTGGACATCTTGCCATTCTGGACCCCCGAGGAGTGGCATTTTC +
Preference number: 5 (lower is better)
Translates to: CYEGAGHWTHRWTHR*WTSCHSGPPRSGIF
Trigger: GAAAATGCCACTCCTCGGGGGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACCTTCATAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361771.7
CDS-3UTR CAA 90 bp GGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTTGCGCTTCACCCGGTTaGTGTGGTCTCCAAACATGT +
Preference number: 5 (lower is better)
Translates to: GARVATGQGEPLPIGNPTCASPG*CGLQTC
Trigger: ACATGTTTGGAGACCACACAAACCGGGTGAAGCGCA...AGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GTGCCCTCACTTTGGTTCCAAGACCCATCTGCACCCCACAAATGCCACCAGCCAAGCACCTCCGAGTGTTaGCTGTTCTCTCGAAGGTCA +
Preference number: 5 (lower is better)
Translates to: VPSLWFQDPSAPHKCHQPSTSEC*LFSRRS
Trigger: TGACCTTCGAGAGAACAGCAAACACTCGGAGGTGCT...TGGCTGGTGGCATTTGTGGGGTGCAGATGGGTCTTGGAACCAAAGTGAGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319394.8
CDS-3UTR CAA 90 bp GAGAATGGCCGTAGTGCAGAAGTGCTGGCATGGATGGGTGGGGTAAGGTGCAGTAGCACCTCCGAGTGTTaGCTGTTCTCTCGAAGGTCA +
Preference number: 5 (lower is better)
Translates to: ENGRSAEVLAWMGGVRCSSTSEC*LFSRRS
Trigger: TGACCTTCGAGAGAACAGCAAACACTCGGAGGTGCT...ACTGCACCTTACCCCACCCATCCATGCCAGCACTTCTGCACTACGGCCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GGGGACAATCAGCCCAGAGTCCGAAAGCCAGCAAGTTGTAGCAACCTCCACCCCAAAAGCCTCATTGGCTaGCTGTTTCACACGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GDNQPRVRKPASCSNLHPKSLIG*LFHTLQ
Trigger: CTGGAGCGTGTGAAACAGCAAGCCAATGAGGCTTTT...GGGGTGGAGGTTGCTACAACTTGCTGGCTTTCGGACTCTGGGCTGATTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp AAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGCTTCAGCCACATACTaGAGCTCAAAGAGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: KASPYQLGIPLLLLLPAKASATY*SSKRQR
Trigger: CCGCTGCCTCTTTGAGCTCAAGTATGTGGCTGAAGC...TTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GAGCTAGCCTTGCAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTAAGAAATTGGCCTCTTaGATATCCGTGGTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: ELALQAREQEWQQAKASPKKLAS*ISVVVL
Trigger: CAACACCACCACGGATATCAAAGAGGCCAATTTCTT...AGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTGCAAGGCTAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAACAGGGGAGCTAGCCTaGCAGGCTAGGGAGCAAGAG +
Preference number: 5 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGTGELA*QAREQE
Trigger: CTCTTGCTCCCTAGCCTGCAAGGCTAGCTCCCCTGT...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp CAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCTCACTTCTTTGGTCTTaGTGGCGGCTCAGCATGTGG +
Preference number: 5 (lower is better)
Translates to: QEWQQAKASPYQLGIPLLSLLWS*WRLSMW
Trigger: CCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA...GAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp CAGGCTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAAAAGCCATCACTTCTTaGGTCTTTGTGGCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: QAREQEWQQAKASPYQLGKAITS*VFVAAQ
Trigger: CTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT...TCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp TCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGAGGGCAGACTGGTGAGTGGTGGGTaGATCGCTGCATCCAGTGTA +
Preference number: 5 (lower is better)
Translates to: SLLWSLWRLSMWDGKEGRLVSGG*IAASSV
Trigger: TACACTGGATGCAGCGATCAACCCACCACTCACCAG...TCTGCCCTCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 90 bp GGTTTCCATAAAGCATGGCATTGTGAGGGGCCCTCTGCACAGCCTTaGTGTAAAGCTGAATGGCTTGGGTCCACTGCTGGCAGGCAAAAG +
Preference number: 5 (lower is better)
Translates to: GFHKAWHCEGPSAQP*CKAEWLGSTAGRQK
Trigger: CTTTTGCCTGCCAGCAGTGGACCCAAGCCATTCAGCTTTACAGCAAGGCTGTGCAGAGGGCCCCTCACAATGCCATGCTTTATGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp GCTGTGGCGATGCGCTTCACCCGGTTTGTGTGGTCTCCAAACATGTaGATGGTCTCCTTTACTGTCAGGTCGTGCACATGCACCTTAGAG +
Preference number: 5 (lower is better)
Translates to: AVAMRFTRFVWSPNM*MVSFTVRSCTCTLE
Trigger: CTCTAAGGTGCATGTGCACGACCTGACAGTAAAGGAGACCATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATCGCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp TTGGACACACCGTTGGACACACCGTTGGTGGACATCTTGCCATTCTaGACTTCCCCCGAGGAGTGGCATTTTCTAGGCAAGAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LDTPLDTPLVDILPF*TSPEEWHFLGKRKV
Trigger: CACCTTCCTCTTGCCTAGAAAATGCCACTCCTCGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp TATGAAGGTGCAGGCCATTGGACACACCGTTGGACACACCGTTGGTaGACATCTTGCCATTCTGGACTTCCCCCGAGGAGTGGCATTTTC +
Preference number: 5 (lower is better)
Translates to: YEGAGHWTHRWTHRW*TSCHSGLPPRSGIF
Trigger: GAAAATGCCACTCCTCGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACCTTCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp CCCACTTGCGCTTCATGTAGGCTGCTGCTCGGTTTCCATAAAGCATaGCATTGTGAGGGGCCCTCTGCACAGCCTTGCTGTAAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: PTCASCRLLLGFHKA*HCEGPSAQPCCKAE
Trigger: TTCAGCTTTACAGCAAGGCTGTGCAGAGGGCCCCTCACAATGCCATGCTTTATGGAAACCGAGCAGCAGCCTACATGAAGCGCAAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp TTGGACACACCGTTGGACACACCGTTGGTGGACATCTTGCCATTCTaGACCCCCGAGGAGTGGCATTTTCTAGGCAAGAGGAAGGTGTAC +
Preference number: 5 (lower is better)
Translates to: LDTPLDTPLVDILPF*TPEEWHFLGKRKVY
Trigger: GTACACCTTCCTCTTGCCTAGAAAATGCCACTCCTCGGGGGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361771.7
CDS-3UTR CAA 90 bp GAGAAAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGACCGTTGGTGGACATCTaGCCATTCTGGACTTCCCCC +
Preference number: 5 (lower is better)
Translates to: EKSHHFFGLCGGSACGMGPLVDI*PFWTSP
Trigger: GGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGG...TCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000447062.2
CDS-3UTR CAA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGACCGTTGGTGGACATCTaGCCATTCTGGACTTCCCCC +
Preference number: 5 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGPLVDI*PFWTSP
Trigger: GGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGG...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000447062.2
CDS-3UTR CAA 90 bp GAAGCTGCCACCTGTGTTGCTGGGATTAAAGCAATGAGATGGTGCCAGACCCCCCAGGCAAAAGCCTCATaGGCTTGCTGTTTCACACGC +
Preference number: 5 (lower is better)
Translates to: EAATCVAGIKAMRWCQTPQAKAS*ACCFTR
Trigger: GCGTGTGAAACAGCAAGCCAATGAGGCTTTTGCCTG...GGGGGTCTGGCACCATCTCATTGCTTTAATCCCAGCAACACAGGTGGCAGCTTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CAA 90 bp CTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCAAAGCCATCACTTCTTaGGTCTTTGTGGCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: LGSKSGNRPRRALTNWESKAITS*VFVAAQ
Trigger: CTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT...GGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 90 bp ACCATCATTTTTAGAGAAGAGGGCAGCTGTGATGTCGCGGCCCAATaGATCACAAGCGCTGCTGTGGGCCTGCTCCGGAAATTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: TIIFREEGSCDVAAQ*ITSAAVGLLRKFPF
Trigger: AAAGGGAAATTTCCGGAGCAGGCCCACAGCAGCGCTTGTGATGCATTGGGCCGCGACATCACAGCTGCCCTCTTCTCTAAAAATGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 90 bp GGCACAGTTTTGAGCACAAAACAGATGTGCCAAGATTCCCAGCCTTaGAGGGCTGCTGCCTCATACTCTCAAGCAGAGGGAGGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: GTVLSTKQMCQDSQP*RAAASYSQAEGGSL
Trigger: CAAGGAACCTCCCTCTGCTTGAGAGTATGAGGCAGCAGCCCTCCAAGGCTGGGAATCTTGGCACATCTGTTTTGTGCTCAAAACTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS-3UTR CAA 90 bp GGGAGGGAGGGGCCGAGTAAGGGACTTTCCCATCTGAGTGGCTCAGGAGACCCAAGGTCTCTAGTTATGTaGACTTTCGCCATCTTTTCT +
Preference number: 5 (lower is better)
Translates to: GREGPSKGLSHLSGSGDPRSLVM*TFAIFS
Trigger: AGAAAAGATGGCGAAAGTCAACATAACTAGAGACCT...TGGGTCTCCTGAGCCACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GGCCAAGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCAGGTCTCTAGTTATGTaGACTTTCGCCATCTTTTCT +
Preference number: 5 (lower is better)
Translates to: GQGEPLPIGNPTPPAAASRSLVM*TFAIFS
Trigger: AGAAAAGATGGCGAAAGTCAACATAACTAGAGACCT...GCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp CAGCAAGTTGTAGCAACCTCCACCCCTAACGCCAAACTAACAAACAAAACAGGGATGGAGAGCAGCTTCTaGTGGTGCAGCGGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: QQVVATSTPNAKLTNKTGMESSF*WCSGSH
Trigger: GTGGGACCCGCTGCACCACAAGAAGCTGCTCTCCAT...CCCTGTTTTGTTTGTTAGTTTGGCGTTAGGGGTGGAGGTTGCTACAACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS-3UTR CAA 90 bp GAGGGGAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGTTGCTGCCAAAGAAATaGGCCTCTTTGATATCCGTG +
Preference number: 5 (lower is better)
Translates to: EGRRGLVSGGLIAASSVKLLPKK*ASLISV
Trigger: CACGGATATCAAAGAGGCCAATTTCTTTGGCAGCAA...CTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CAA 90 bp CTCTGGAGGGAGGGTGGGACCCATCCTTTTTCAAAACCTTTCCTGAAGACCACAAATGGACTCATCCCCTaGGAGCACACGGACCAGGTT +
Preference number: 5 (lower is better)
Translates to: LWREGGTHPFSKPFLKTTNGLIP*EHTDQV
Trigger: AACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCATT...TGTGGTCTTCAGGAAAGGTTTTGAAAAAGGATGGGTCCCACCCTCCCTCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS TCA 90 bp CTTGGAGGGCTGCTGCCTCATACTCTCAAGCAGAGGGAGGTTCCTTaGATGCAGATAAAGAAACCAAGCTCTGGCACATGCAGACAGAGG +
Preference number: 5 (lower is better)
Translates to: LGGLLPHTLKQREVP*MQIKKPSSGTCRQR
Trigger: CCTCTGTCTGCATGTGCCAGAGCTTGGTTTCTTTATCTGCATTCAAGGAACCTCCCTCTGCTTGAGAGTATGAGGCAGCAGCCCTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CCA 90 bp AAAGCTGAATGGCTTGGGTCCACTGCTGGCAGGCAAAAGCCTCATTaGCTTGCTGTTTCACACGCTCCAGGTATGGTGGTAGCTCTACTT +
Preference number: 5 (lower is better)
Translates to: KAEWLGSTAGRQKPH*LAVSHAPGMVVALL
Trigger: AAGTAGAGCTACCACCATACCTGGAGCGTGTGAAACAGCAAGCCAATGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGCCATTCAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS-3UTR CAA 90 bp GAGGAGAGGCCTGGTGAGTGGTGGGTTGATCGCTGCATCCAGTGTAAAGCTTGGAAGAAATTGGCCTCTTaGATATCCGTGGTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: EERPGEWWVDRCIQCKAWKKLAS*ISVVVL
Trigger: CAACACCACCACGGATATCAAAGAGGCCAATTTCTT...CCAAGCTTTACACTGGATGCAGCGATCAACCCACCACTCACCAGGCCTCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS-3UTR CAA 90 bp AGGCGAGCCCTTACCAATTGGGAATCCCACTCCTCCTGCTGCTGCCAGCTAAAGAAGAAATTGGCCTCTTaGATATCCGTGGTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: RRALTNWESHSSCCCQLKKKLAS*ISVVVL
Trigger: CAACACCACCACGGATATCAAAGAGGCCAATTTCTT...CTTTAGCTGGCAGCAGCAGGAGGAGTGGGATTCCCAATTGGTAAGGGCTCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 90 bp TTTGAGCACAAAACAGATGTGCCAAGATTCCCAGCCTTGGAGGGCTaGTGCCTCATACTCTCAAGCAGAGGGAGGTTCCTTGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: FEHKTDVPRFPALEG*CLILSSRGRFLECR
Trigger: TCTGCATTCAAGGAACCTCCCTCTGCTTGAGAGTATGAGGCAGCAGCCCTCCAAGGCTGGGAATCTTGGCACATCTGTTTTGTGCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS GCA 90 bp TTGTCCCTTAGTACACAGGGCACAGTTTTGAGCACAAAACAGATGTaGCAAGATTCCCAGCCTTGGAGGGCTGCTGCCTCATACTCTCAA +
Preference number: 5 (lower is better)
Translates to: LSLSTQGTVLSTKQM*QDSQPWRAAASYSQ
Trigger: TTGAGAGTATGAGGCAGCAGCCCTCCAAGGCTGGGAATCTTGGCACATCTGTTTTGTGCTCAAAACTGTGCCCTGTGTACTAAGGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS-3UTR CAA 90 bp CTAGGGAGCAAGAGTGGCAACAGGCCAAGGCGAGCCCTTACCAATTGGGAATCCAGGTCTCTAGTTATGTaGACTTTCGCCATCTTTTCT +
Preference number: 5 (lower is better)
Translates to: LGSKSGNRPRRALTNWESRSLVM*TFAIFS
Trigger: AGAAAAGATGGCGAAAGTCAACATAACTAGAGACCT...GGATTCCCAATTGGTAAGGGCTCGCCTTGGCCTGTTGCCACTCTTGCTCCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS TCA 90 bp TGTCTGAAACACAGAGTTTGTCCCTTAGTACACAGGGCACAGTTTTaGGCACAAAACAGATGTGCCAAGATTCCCAGCCTTGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: CLKHRVCPLVHRAQF*AQNRCAKIPSLGGL
Trigger: CAGCCCTCCAAGGCTGGGAATCTTGGCACATCTGTTTTGTGCTCAAAACTGTGCCCTGTGTACTAAGGGACAAACTCTGTGTTTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS-3UTR CAA 90 bp AAAGCCATCACTTCTTTGGTCTTTGTGGCGGCTCAGCATGTGGGATGGGAAGGATTGCTGCCAAAGAAATaGGCCTCTTTGATATCCGTG +
Preference number: 5 (lower is better)
Translates to: KAITSLVFVAAQHVGWEGLLPKK*ASLISV
Trigger: CACGGATATCAAAGAGGCCAATTTCTTTGGCAGCAA...TCCTTCCCATCCCACATGCTGAGCCGCCACAAAGACCAAAGAAGTGATGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS TCA 90 bp TCTCACCTACCCAAAGAAAGTACATCTACAAATGAGGGGTGGGGATaGTGGTGTCTGAAACACAGAGTTTGTCCCTTAGTACACAGGGCA +
Preference number: 5 (lower is better)
Translates to: SHLPKESTSTNEGWG*WCLKHRVCPLVHRA
Trigger: TGCCCTGTGTACTAAGGGACAAACTCTGTGTTTCAGACACCATCATCCCCACCCCTCATTTGTAGATGTACTTTCTTTGGGTAGGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CCA 90 bp GGATTTCTCCAAGACAGTCTCCCCTATAGTTCATTATTACCTCCTTaGGCCAGGATCATCTTACATCATCTCTCGGGTCTCCAAAATACC +
Preference number: 5 (lower is better)
Translates to: GFLQDSLPYSSLLPP*ARIILHHLSGLQNT
Trigger: GGTATTTTGGAGACCCGAGAGATGATGTAAGATGATCCTGGCCCAAGGAGGTAATAATGAACTATAGGGGAGACTGTCTTGGAGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS TCA 90 bp TCATGTTCATGTGTCTCACCTACCCAAAGAAAGTACATCTACAAATaGGGGGTGGGGATGATGGTGTCTGAAACACAGAGTTTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: SCSCVSPTQRKYIYK*GVGMMVSETQSLSL
Trigger: AAGGGACAAACTCTGTGTTTCAGACACCATCATCCCCACCCCTCATTTGTAGATGTACTTTCTTTGGGTAGGTGAGACACATGAACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CCA 72 bp GATGGAGTCCTTGCGGCTCGTGCTGCGGAGGCGGACTaGGGCGCCGCCACCAGGTCCCTTCTTCTCCTCACC +
Preference number: 6 (lower is better)
Translates to: DGVLAARAAEAD*GAATRSLLLLT
Trigger: GGTGAGGAGAAGAAGGGACCTGGTGGCGGCGCCCCAGTCCGCCTCCGCAGCACGAGCCGCAAGGACTCCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp TTTCATCCTCTGAGATGGAGTCCTTGCGGCTCGTGCTaGGGAGGCGGACTGGGGCGCCGCCACCAGGTCCCT +
Preference number: 6 (lower is better)
Translates to: FHPLRWSPCGSC*GGGLGRRHQVP
Trigger: AGGGACCTGGTGGCGGCGCCCCAGTCCGCCTCCGCAGCACGAGCCGCAAGGACTCCATCTCAGAGGATGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp GGCCCGCTGGCCCCAACTGCCAGGCAGTTGTTGTCCTaGGGGTTGACAGTGAGGCACTTGGCCTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: GPLAPTARQLLS*GLTVRHLASTS
Trigger: GCTGGTGGAGGCCAAGTGCCTCACTGTCAACCCCCAGGACAACAACTGCCTGGCAGTTGGGGCCAGCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 72 bp CTCACGAAGGGCCCGCTGGCCCCAACTGCCAGGCAGTaGTTGTCCTGGGGGTTGACAGTGAGGCACTTGGCC +
Preference number: 6 (lower is better)
Translates to: LTKGPLAPTARQ*LSWGLTVRHLA
Trigger: GGCCAAGTGCCTCACTGTCAACCCCCAGGACAACAACTGCCTGGCAGTTGGGGCCAGCGGGCCCTTCGTGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp CTGGTCGGGGGTTCCAGAGCCGCACAACAGGATCGATaGCACTGGTGGCCAGGAAGCAGTAGCTGGGGTGTG +
Preference number: 6 (lower is better)
Translates to: LVGGSRAAQQDR*HWWPGSSSWGV
Trigger: CACACCCCAGCTACTGCTTCCTGGCCACCAGTGGCATCGATCCTGTTGTGCGGCTCTGGAACCCCCGACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS CCA 72 bp GGTTCCAGAGCCGCACAACAGGATCGATGCCACTGGTaGCCAGGAAGCAGTAGCTGGGGTGTGGCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: GSRAAQQDRCHW*PGSSSWGVAAG
Trigger: GCCTGCAGCCACACCCCAGCTACTGCTTCCTGGCCACCAGTGGCATCGATCCTGTTGTGCGGCTCTGGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS CCA 72 bp GGGGGTTCCAGAGCCGCACAACAGGATCGATGCCACTaGTGGCCAGGAAGCAGTAGCTGGGGTGTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: GGSRAAQQDRCH*WPGSSSWGVAA
Trigger: TGCAGCCACACCCCAGCTACTGCTTCCTGGCCACCAGTGGCATCGATCCTGTTGTGCGGCTCTGGAACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS CAA 72 bp CTGGCCCCAACTGCCAGGCAGTTGTTGTCCTGGGGGTaGACAGTGAGGCACTTGGCCTCCACCAGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: LAPTARQLLSWG*TVRHLASTSWP
Trigger: TGGCCAGCTGGTGGAGGCCAAGTGCCTCACTGTCAACCCCCAGGACAACAACTGCCTGGCAGTTGGGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 90 bp AAGGGCCCGCTGGCCCCAACTGCCAGGCAGTTGTTGTCCTGGGGGTaGACAGTGAGGCACTTGGCCTCCACCAGCTGGCCACAGTACTCT +
Preference number: 6 (lower is better)
Translates to: KGPLAPTARQLLSWG*TVRHLASTSWPQYS
Trigger: AGAGTACTGTGGCCAGCTGGTGGAGGCCAAGTGCCTCACTGTCAACCCCCAGGACAACAACTGCCTGGCAGTTGGGGCCAGCGGGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp GTCATAGAGCCTCACGAAGGGCCCGCTGGCCCCAACTaGCAGGCAGTTGTTGTCCTGGGGGTTGACAGTGAG +
Preference number: 6 (lower is better)
Translates to: VIEPHEGPAGPN*QAVVVLGVDSE
Trigger: CTCACTGTCAACCCCCAGGACAACAACTGCCTGGCAGTTGGGGCCAGCGGGCCCTTCGTGAGGCTCTATGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp TCATGCGGATGTCATAGAGCCTCACGAAGGGCCCGCTaGCCCCAACTGCCAGGCAGTTGTTGTCCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: SCGCHRASRRAR*PQLPGSCCPGG
Trigger: ACCCCCAGGACAACAACTGCCTGGCAGTTGGGGCCAGCGGGCCCTTCGTGAGGCTCTATGACATCCGCATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp TACTGTCAGGTCGTGCACATGCACCTTAGAGTCGGCTaGCCCCGTGATCAAGATGCGGTCCCCAGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: YCQVVHMHLRVG*PRDQDAVPSVR
Trigger: CCTCACGCTGGGGACCGCATCTTGATCACGGGGGCAGCCGACTCTAAGGTGCATGTGCACGACCTGACAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS CCA 72 bp GCGGTGTGTCCCGTGTGCATGGAGAGCAGCTTCTTGTaGTGCAGCGGGTCCCACACAATCGTGTGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: AVCPVCMESSFL*CSGSHTIVCWS
Trigger: TGACCAGCACACGATTGTGTGGGACCCGCTGCACCACAAGAAGCTGCTCTCCATGCACACGGGACACACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS CCA 72 bp AAGAGGCAGCGGGCCAGGCGAAAGTGTGCCTTCAGGTaGCATGGGTTTAGGGAGATGGCCTTGAGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: KRQRARRKCAFR*HGFREMALRQS
Trigger: GGACTGCCTCAAGGCCATCTCCCTAAACCCATGCCACCTGAAGGCACACTTTCGCCTGGCCCGCTGCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp GCAGGCCATTGGACACACCGTTGGACACACCGTTGGTaGACATCTTGCCATTCTGGACCCCCGAGGAGTGGC +
Preference number: 6 (lower is better)
Translates to: AGHWTHRWTHRW*TSCHSGPPRSG
Trigger: GCCACTCCTCGGGGGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361771.7
CDS CAA 72 bp CGGATAAGCCCATCCTCAGCAGCACTCCAGAATGTGTaGGGCCACATGGGCGCTGTGGCGATGCGCTTCACC +
Preference number: 6 (lower is better)
Translates to: RISPSSAALQNV*GHMGAVAMRFT
Trigger: GGTGAAGCGCATCGCCACAGCGCCCATGTGGCCCAACACATTCTGGAGTGCTGCTGAGGATGGGCTTATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS TCA 72 bp CAACGGGTCTGCATTCATGCGCCGCTGGTTGGCCTGTaGAGCACCCTCCATATCTTCCACGACTCGGCCTGT +
Preference number: 6 (lower is better)
Translates to: QRVCIHAPLVGL*STLHIFHDSAC
Trigger: ACAGGCCGAGTCGTGGAAGATATGGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGAATGCAGACCCGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS GCA 72 bp GTGTGTCCCGTGTGCATGGAGAGCAGCTTCTTGTGGTaGAGCGGGTCCCACACAATCGTGTGCTGGTCATCG +
Preference number: 6 (lower is better)
Translates to: VCPVCMESSFLW*SGSHTIVCWSS
Trigger: CGATGACCAGCACACGATTGTGTGGGACCCGCTGCACCACAAGAAGCTGCTCTCCATGCACACGGGACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 72 bp CCGTCCGGAAGGGGTTTCTGCCGGTCACAGAAGGTGTaGACACCCGCTGAAGGGCTCTGCTTCATGCTCTTT +
Preference number: 6 (lower is better)
Translates to: PSGRGFCRSQKV*TPAEGLCFMLF
Trigger: AAAGAGCATGAAGCAGAGCCCTTCAGCGGGTGTGCACACCTTCTGTGACCGGCAGAAACCCCTTCCGGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp TCGCGGCCCAATGCATCACAAGCGCTGCTGTGGGCCTaGTCCGGAAATTTCCCTTTGAAGTCGTCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: SRPNASQALLWA*SGNFPLKSSRH
Trigger: GTGCCTGGACGACTTCAAAGGGAAATTTCCGGAGCAGGCCCACAGCAGCGCTTGTGATGCATTGGGCCGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp CATCCTCAGCAGCACTCCAGAATGTGTTGGGCCACATaGGCGCTGTGGCGATGCGCTTCACCCGGTTTGTGT +
Preference number: 6 (lower is better)
Translates to: HPQQHSRMCWAT*ALWRCASPGLC
Trigger: ACACAAACCGGGTGAAGCGCATCGCCACAGCGCCCATGTGGCCCAACACATTCTGGAGTGCTGCTGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp TGGGGGTTGACAGTGAGGCACTTGGCCTCCACCAGCTaGCCACAGTACTCTGTCAGGTCAATCAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: WGLTVRHLASTS*PQYSVRSISTS
Trigger: GGAGGTGCTGATTGACCTGACAGAGTACTGTGGCCAGCTGGTGGAGGCCAAGTGCCTCACTGTCAACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp GGTGCAGGCCATTGGACACACCGTTGGACACACCGTTaGTGGACATCTTGCCATTCTGGACTTCCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: GAGHWTHRWTHR*WTSCHSGLPPR
Trigger: CCTCGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp GATGCCACTGGTGGCCAGGAAGCAGTAGCTGGGGTGTaGCTGCAGGCAGTTGACAATGGACTCATCCCCTTG +
Preference number: 6 (lower is better)
Translates to: DATGGQEAVAGV*LQAVDNGLIPL
Trigger: CAAGGGGATGAGTCCATTGTCAACTGCCTGCAGCCACACCCCAGCTACTGCTTCCTGGCCACCAGTGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS CCA 72 bp GGTGCAGGCCATTGGACACACCGTTGGACACACCGTTaGTGGACATCTTGCCATTCTGGACCCCCGAGGAGT +
Preference number: 6 (lower is better)
Translates to: GAGHWTHRWTHR*WTSCHSGPPRS
Trigger: ACTCCTCGGGGGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361771.7
CDS CAA 72 bp TTTGCGGTGTGTCCCGTGTGCATGGAGAGCAGCTTCTaGTGGTGCAGCGGGTCCCACACAATCGTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: FAVCPVCMESSF*WCSGSHTIVCW
Trigger: CCAGCACACGATTGTGTGGGACCCGCTGCACCACAAGAAGCTGCTCTCCATGCACACGGGACACACCGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS CAA 72 bp AGGCAGTTGTTGTCCTGGGGGTTGACAGTGAGGCACTaGGCCTCCACCAGCTGGCCACAGTACTCTGTCAGG +
Preference number: 6 (lower is better)
Translates to: RQLLSWGLTVRH*ASTSWPQYSVR
Trigger: CCTGACAGAGTACTGTGGCCAGCTGGTGGAGGCCAAGTGCCTCACTGTCAACCCCCAGGACAACAACTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 72 bp AGGTGCAGGCCATTGGACACACCGTTGGACACACCGTaGGTGGACATCTTGCCATTCTGGACCCCCGAGGAG +
Preference number: 6 (lower is better)
Translates to: RCRPLDTPLDTP*VDILPFWTPEE
Trigger: CTCCTCGGGGGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361771.7
CDS CAA 72 bp GTGTGGCTGCAGGCAGTTGACAATGGACTCATCCCCTaGGAGCACACGGACCAGGTTGGTGGTCTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: VWLQAVDNGLIP*EHTDQVGGLLP
Trigger: TGGCAGGAGACCACCAACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCATTGTCAACTGCCTGCAGCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS CAA 72 bp GCAGCCACTCAGTCCCCCACACGCTGGGGTGTGCACTaGACCCAGAATTCCTCCAGGTATATAGCCCTGGTC +
Preference number: 6 (lower is better)
Translates to: AATQSPTRWGVH*TQNSSRYIALV
Trigger: GACCAGGGCTATATACCTGGAGGAATTCTGGGTCAAGTGCACACCCCAGCGTGTGGGGGACTGAGTGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CAA 90 bp TTGAGCAGCATCACCTCCAACGGGTCTGCATTCATGCGCCGCTGGTaGGCCTGTGAAGCACCCTCCATATCTTCCACGACTCGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: LSSITSNGSAFMRRW*ACEAPSISSTTRPV
Trigger: CACAGGCCGAGTCGTGGAAGATATGGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGAATGCAGACCCGTTGGAGGTGATGCTGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS CAA 90 bp TTCCCTTTGAAGTCGTCCAGGCACTCCAGGGCTTCAGCCACATACTaGAGCTCAAAGAGGCAGCGGGCCAGGCGAAAGTGTGCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: FPLKSSRHSRASATY*SSKRQRARRKCAFR
Trigger: CCTGAAGGCACACTTTCGCCTGGCCCGCTGCCTCTTTGAGCTCAAGTATGTGGCTGAAGCCCTGGAGTGCCTGGACGACTTCAAAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS TCA 72 bp TGTCCCCTACTCTCCGGCAGCCGGAAGCCATTGCTATaGAGGTGCAGGCCATTGGACACACCGTTGGACACA +
Preference number: 6 (lower is better)
Translates to: CPLLSGSRKPLL*RCRPLDTPLDT
Trigger: TGTGTCCAACGGTGTGTCCAATGGCCTGCACCTTCATAGCAATGGCTTCCGGCTGCCGGAGAGTAGGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS TCA 72 bp AAGCGCTGCTGTGGGCCTGCTCCGGAAATTTCCCTTTaGAGTCGTCCAGGCACTCCAGGGCTTCAGCCACAT +
Preference number: 6 (lower is better)
Translates to: KRCCGPAPEISL*SRPGTPGLQPH
Trigger: ATGTGGCTGAAGCCCTGGAGTGCCTGGACGACTTCAAAGGGAAATTTCCGGAGCAGGCCCACAGCAGCGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp CTTCACTGGCAGGTGACCTGCTACGTAATACTGGGCTaGACCGTCCGGAAGGGGTTTCTGCCGGTCACAGAA +
Preference number: 6 (lower is better)
Translates to: LHWQVTCYVILG*TVRKGFLPVTE
Trigger: TTCTGTGACCGGCAGAAACCCCTTCCGGACGGTGCAGCCCAGTATTACGTAGCAGGTCACCTGCCAGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp TTTAGAGAAGAGGGCAGCTGTGATGTCGCGGCCCAATaGATCACAAGCGCTGCTGTGGGCCTGCTCCGGAAA +
Preference number: 6 (lower is better)
Translates to: FREEGSCDVAAQ*ITSAAVGLLRK
Trigger: TTTCCGGAGCAGGCCCACAGCAGCGCTTGTGATGCATTGGGCCGCGACATCACAGCTGCCCTCTTCTCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp GCAGGCCATTGGACACACCGTTGGACACACCGTTGGTaGACATCTTGCCATTCTGGACTTCCCCCGAGGAGT +
Preference number: 6 (lower is better)
Translates to: AGHWTHRWTHRW*TSCHSGLPPRS
Trigger: ACTCCTCGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp GAGGGGCCCTCTGCACAGCCTTGCTGTAAAGCTGAATaGCTTGGGTCCACTGCTGGCAGGCAAAAGCCTCAT +
Preference number: 6 (lower is better)
Translates to: EGPSAQPCCKAE*LGSTAGRQKPH
Trigger: ATGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGCCATTCAGCTTTACAGCAAGGCTGTGCAGAGGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp TCACCTCCAACGGGTCTGCATTCATGCGCCGCTGGTTaGCCTGTGAAGCACCCTCCATATCTTCCACGACTC +
Preference number: 6 (lower is better)
Translates to: SPPTGLHSCAAG*PVKHPPYLPRL
Trigger: GAGTCGTGGAAGATATGGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGAATGCAGACCCGTTGGAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS CCA 72 bp AGCATCACCTCCAACGGGTCTGCATTCATGCGCCGCTaGTTGGCCTGTGAAGCACCCTCCATATCTTCCACG +
Preference number: 6 (lower is better)
Translates to: SITSNGSAFMRR*LACEAPSISST
Trigger: CGTGGAAGATATGGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGAATGCAGACCCGTTGGAGGTGATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS CCA 72 bp TGTGGCTGCAGGCAGTTGACAATGGACTCATCCCCTTaGAGCACACGGACCAGGTTGGTGGTCTCCTGCCAA +
Preference number: 6 (lower is better)
Translates to: CGCRQLTMDSSP*STRTRLVVSCQ
Trigger: TTGGCAGGAGACCACCAACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCATTGTCAACTGCCTGCAGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS CAA 72 bp AGGTGCAGGCCATTGGACACACCGTTGGACACACCGTaGGTGGACATCTTGCCATTCTGGACTTCCCCCGAG +
Preference number: 6 (lower is better)
Translates to: RCRPLDTPLDTP*VDILPFWTSPE
Trigger: CTCGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000447062.2
ENST00000491239.2
CDS CAA 72 bp GGCCCTCTGCACAGCCTTGCTGTAAAGCTGAATGGCTaGGGTCCACTGCTGGCAGGCAAAAGCCTCATTGGC +
Preference number: 6 (lower is better)
Translates to: GPLHSLAVKLNG*GPLLAGKSLIG
Trigger: GCCAATGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGCCATTCAGCTTTACAGCAAGGCTGTGCAGAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 72 bp AAGTCGTCCAGGCACTCCAGGGCTTCAGCCACATACTaGAGCTCAAAGAGGCAGCGGGCCAGGCGAAAGTGT +
Preference number: 6 (lower is better)
Translates to: KSSRHSRASATY*SSKRQRARRKC
Trigger: ACACTTTCGCCTGGCCCGCTGCCTCTTTGAGCTCAAGTATGTGGCTGAAGCCCTGGAGTGCCTGGACGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 90 bp TGCAGGCCATTGGACACACCGTTGGACACACCGTTGGTGGACATCTaGCCATTCTGGACCCCCGAGGAGTGGCATTTTCTAGGCAAGAGG +
Preference number: 6 (lower is better)
Translates to: CRPLDTPLDTPLVDI*PFWTPEEWHFLGKR
Trigger: CCTCTTGCCTAGAAAATGCCACTCCTCGGGGGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361771.7
CDS CAA 90 bp GTAGCTGGGGTGTGGCTGCAGGCAGTTGACAATGGACTCATCCCCTaGGAGCACACGGACCAGGTTGGTGGTCTCCTGCCAAAGAAATTG +
Preference number: 6 (lower is better)
Translates to: VAGVWLQAVDNGLIP*EHTDQVGGLLPKKL
Trigger: CAATTTCTTTGGCAGGAGACCACCAACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCATTGTCAACTGCCTGCAGCCACACCCCAGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS TCA 72 bp GTGCCTTCAGGTGGCATGGGTTTAGGGAGATGGCCTTaGGGCAGTCCCTCAGGGCATCATAGTGGTCACCAT +
Preference number: 6 (lower is better)
Translates to: VPSGGMGLGRWP*GSPSGHHSGHH
Trigger: ATGGTGACCACTATGATGCCCTGAGGGACTGCCTCAAGGCCATCTCCCTAAACCCATGCCACCTGAAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS TCA 72 bp TCAGGGCCTCGGACCTGCCAAAGAAATTGGCCTCTTTaGTATCCGTGGTGGTGTTGCAGTGGCCGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: SGPRTCQRNWPL*YPWWCCSGRSS
Trigger: GCTACTGCGGCCACTGCAACACCACCACGGATATCAAAGAGGCCAATTTCTTTGGCAGGTCCGAGGCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS GCA 72 bp AAAGCATGGCATTGTGAGGGGCCCTCTGCACAGCCTTaGTGTAAAGCTGAATGGCTTGGGTCCACTGCTGGC +
Preference number: 6 (lower is better)
Translates to: KAWHCEGPSAQP*CKAEWLGSTAG
Trigger: GCCAGCAGTGGACCCAAGCCATTCAGCTTTACAGCAAGGCTGTGCAGAGGGCCCCTCACAATGCCATGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp GCAGCCGGAAGCCATTGCTATGAAGGTGCAGGCCATTaGACACACCGTTGGACACACCGTTGGTGGACATCT +
Preference number: 6 (lower is better)
Translates to: AAGSHCYEGAGH*THRWTHRWWTS
Trigger: AGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACCTTCATAGCAATGGCTTCCGGCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp TGTGGCTGCAGGCAGTTGACAATGGACTCATCCCCTTaGAGCACACGGACCAGGTTGGTGGTCTCCTTTTCC +
Preference number: 6 (lower is better)
Translates to: CGCRQLTMDSSP*STRTRLVVSFS
Trigger: GGAAAAGGAGACCACCAACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCATTGTCAACTGCCTGCAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000472249.2
ENST00000491239.2
CDS CAA 72 bp GCCACATGGGCGCTGTGGCGATGCGCTTCACCCGGTTaGTGTGGTCTCCAAACATGTGGATGGTCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: ATWALWRCASPG*CGLQTCGWSPL
Trigger: TAAAGGAGACCATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATCGCCACAGCGCCCATGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 72 bp GTGTGGCTGCAGGCAGTTGACAATGGACTCATCCCCTaGGAGCACACGGACCAGGTTGGTGGTCTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: VWLQAVDNGLIP*EHTDQVGGLLF
Trigger: GAAAAGGAGACCACCAACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCATTGTCAACTGCCTGCAGCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000472249.2
ENST00000491239.2
CDS CAA 72 bp ATCACCTCCAACGGGTCTGCATTCATGCGCCGCTGGTaGGCCTGTGAAGCACCCTCCATATCTTCCACGACT +
Preference number: 6 (lower is better)
Translates to: ITSNGSAFMRRW*ACEAPSISSTT
Trigger: AGTCGTGGAAGATATGGAGGGTGCTTCACAGGCCAACCAGCGGCGCATGAATGCAGACCCGTTGGAGGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000472249.2
ENST00000491239.2
CDS CAA 90 bp GAGAAGATATTTGCGGTGTGTCCCGTGTGCATGGAGAGCAGCTTCTaGTGGTGCAGCGGGTCCCACACAATCGTGTGCTGGTCATCGGAA +
Preference number: 6 (lower is better)
Translates to: EKIFAVCPVCMESSF*WCSGSHTIVCWSSE
Trigger: TTCCGATGACCAGCACACGATTGTGTGGGACCCGCTGCACCACAAGAAGCTGCTCTCCATGCACACGGGACACACCGCAAATATCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS CAA 90 bp ATGTGTTGGGCCACATGGGCGCTGTGGCGATGCGCTTCACCCGGTTaGTGTGGTCTCCAAACATGTGGATGGTCTCCTTTACTGTCAGGT +
Preference number: 6 (lower is better)
Translates to: MCWATWALWRCASPG*CGLQTCGWSPLLSG
Trigger: ACCTGACAGTAAAGGAGACCATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATCGCCACAGCGCCCATGTGGCCCAACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 90 bp TGCAGGCCATTGGACACACCGTTGGACACACCGTTGGTGGACATCTaGCCATTCTGGACTTCCCCCGAGGAGTGGCATTTTCTAGGCAAG +
Preference number: 6 (lower is better)
Translates to: CRPLDTPLDTPLVDI*PFWTSPEEWHFLGK
Trigger: CTTGCCTAGAAAATGCCACTCCTCGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000447062.2
ENST00000491239.2
CDS TCA 72 bp GGGTTTCTGCCGGTCACAGAAGGTGTGCACACCCGCTaGAGGGCTCTGCTTCATGCTCTTTCTGTGGTTATG +
Preference number: 6 (lower is better)
Translates to: GFLPVTEGVHTR*RALLHALSVVM
Trigger: CATAACCACAGAAAGAGCATGAAGCAGAGCCCTTCAGCGGGTGTGCACACCTTCTGTGACCGGCAGAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp CCAAACATGTGGATGGTCTCCTTTACTGTCAGGTCGTaGACATGCACCTTAGAGTCGGCTGCCCCCGTGATC +
Preference number: 6 (lower is better)
Translates to: PNMWMVSFTVRS*TCTLESAAPVI
Trigger: GATCACGGGGGCAGCCGACTCTAAGGTGCATGTGCACGACCTGACAGTAAAGGAGACCATCCACATGTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 72 bp CGGTCACAGAAGGTGTGCACACCCGCTGAAGGGCTCTaGTTCATGCTCTTTCTGTGGTTATGGATCATGCGG +
Preference number: 6 (lower is better)
Translates to: RSQKVCTPAEGL*FMLFLWLWIMR
Trigger: CCGCATGATCCATAACCACAGAAAGAGCATGAAGCAGAGCCCTTCAGCGGGTGTGCACACCTTCTGTGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp TGGACACACCGTTGGACACACCGTTGGTGGACATCTTaGCATTCTGGACTTCCCCCGAGGAGTGGCATTTTC +
Preference number: 6 (lower is better)
Translates to: WTHRWTHRWWTS*HSGLPPRSGIF
Trigger: GAAAATGCCACTCCTCGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp TGGGTCCACTGCTGGCAGGCAAAAGCCTCATTGGCTTaGTGTTTCACACGCTCCAGGTATGGTGGTAGCTCT +
Preference number: 6 (lower is better)
Translates to: WVHCWQAKASLA*CFTRSRYGGSS
Trigger: AGAGCTACCACCATACCTGGAGCGTGTGAAACAGCAAGCCAATGAGGCTTTTGCCTGCCAGCAGTGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp GTGGTCACCATCCCACTTGCGCTTCATGTAGGCTGCTaGTCGGTTTCCATAAAGCATGGCATTGTGAGGGGC +
Preference number: 6 (lower is better)
Translates to: VVTIPLALHVGC*SVSIKHGIVRG
Trigger: GCCCCTCACAATGCCATGCTTTATGGAAACCGAGCAGCAGCCTACATGAAGCGCAAGTGGGATGGTGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp ATGGGCGCTGTGGCGATGCGCTTCACCCGGTTTGTGTaGTCTCCAAACATGTGGATGGTCTCCTTTACTGTC +
Preference number: 6 (lower is better)
Translates to: MGAVAMRFTRFV*SPNMWMVSFTV
Trigger: GACAGTAAAGGAGACCATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCATCGCCACAGCGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp CCGTTGGACACACCGTTGGTGGACATCTTGCCATTCTaGACTTCCCCCGAGGAGTGGCATTTTCTAGGCAAG +
Preference number: 6 (lower is better)
Translates to: PLDTPLVDILPF*TSPEEWHFLGK
Trigger: CTTGCCTAGAAAATGCCACTCCTCGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp TGGCTTGGGTCCACTGCTGGCAGGCAAAAGCCTCATTaGCTTGCTGTTTCACACGCTCCAGGTATGGTGGTA +
Preference number: 6 (lower is better)
Translates to: WLGSTAGRQKPH*LAVSHAPGMVV
Trigger: TACCACCATACCTGGAGCGTGTGAAACAGCAAGCCAATGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 72 bp ATGGCTTGGGTCCACTGCTGGCAGGCAAAAGCCTCATaGGCTTGCTGTTTCACACGCTCCAGGTATGGTGGT +
Preference number: 6 (lower is better)
Translates to: MAWVHCWQAKAS*ACCFTRSRYGG
Trigger: ACCACCATACCTGGAGCGTGTGAAACAGCAAGCCAATGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 72 bp ACCCTCCTCTTCAGGGCCTCGGACCTGCCAAAGAAATaGGCCTCTTTGATATCCGTGGTGGTGTTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: TLLFRASDLPKK*ASLISVVVLQW
Trigger: CCACTGCAACACCACCACGGATATCAAAGAGGCCAATTTCTTTGGCAGGTCCGAGGCCCTGAAGAGGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CAA 90 bp ATTGTGAGGGGCCCTCTGCACAGCCTTGCTGTAAAGCTGAATGGCTaGGGTCCACTGCTGGCAGGCAAAAGCCTCATTGGCTTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: IVRGPLHSLAVKLNG*GPLLAGKSLIGLLF
Trigger: AAACAGCAAGCCAATGAGGCTTTTGCCTGCCAGCAGTGGACCCAAGCCATTCAGCTTTACAGCAAGGCTGTGCAGAGGGCCCCTCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 90 bp AGGCAGTTGACAATGGACTCATCCCCTTGGAGCACACGGACCAGGTaGGTGGTCTCCTTTTCCCAGATGAAGAAGGAGCCATCGTCAGAG +
Preference number: 6 (lower is better)
Translates to: RQLTMDSSPWSTRTR*VVSFSQMKKEPSSE
Trigger: CTCTGACGATGGCTCCTTCTTCATCTGGGAAAAGGAGACCACCAACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCATTGTCAACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000472249.2
ENST00000491239.2
CDS TCA 72 bp AGGTTGGTGGTCTCCTGCCAAAGAAATTGGCCTCTTTaGTATCCGTGGTGGTGTTGCAGTGGCCGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: RLVVSCQRNWPL*YPWWCCSGRSS
Trigger: GCTACTGCGGCCACTGCAACACCACCACGGATATCAAAGAGGCCAATTTCTTTGGCAGGAGACCACCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447062.2
CDS GCA 72 bp ATGTGGATGGTCTCCTTTACTGTCAGGTCGTGCACATaGACCTTAGAGTCGGCTGCCCCCGTGATCAAGATG +
Preference number: 6 (lower is better)
Translates to: MWMVSFTVRSCT*TLESAAPVIKM
Trigger: CATCTTGATCACGGGGGCAGCCGACTCTAAGGTGCATGTGCACGACCTGACAGTAAAGGAGACCATCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
CDS GCA 72 bp ACAGATGTGCCAAGATTCCCAGCCTTGGAGGGCTGCTaGCTCATACTCTCAAGCAGAGGGAGGTTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: TDVPRFPALEGC*LILSSRGRFLE
Trigger: TTCAAGGAACCTCCCTCTGCTTGAGAGTATGAGGCAGCAGCCCTCCAAGGCTGGGAATCTTGGCACATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CAA 72 bp TTGGACACACCGTTGGACACACCGTTGGTGGACATCTaGCCATTCTGGACTTCCCCCGAGGAGTGGCATTTT +
Preference number: 6 (lower is better)
Translates to: LDTPLDTPLVDI*PFWTSPEEWHF
Trigger: AAAATGCCACTCCTCGGGGGAAGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319394.8
ENST00000447062.2
ENST00000491239.2
CDS CAA 72 bp ACAATGGACTCATCCCCTTGGAGCACACGGACCAGGTaGGTGGTCTCCTTTTCCCAGATGAAGAAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: TMDSSPWSTRTR*VVSFSQMKKEP
Trigger: TGGCTCCTTCTTCATCTGGGAAAAGGAGACCACCAACCTGGTCCGTGTGCTCCAAGGGGATGAGTCCATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000472249.2
ENST00000491239.2
CDS CAA 72 bp TTGGACACACCGTTGGACACACCGTTGGTGGACATCTaGCCATTCTGGACCCCCGAGGAGTGGCATTTTCTA +
Preference number: 6 (lower is better)
Translates to: LDTPLDTPLVDI*PFWTPEEWHFL
Trigger: TAGAAAATGCCACTCCTCGGGGGTCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361771.7
CDS CAA 90 bp AGCTGGCCACAGTACTCTGTCAGGTCAATCAGCACCTCCGAGTGTTaGCTGTTCTCTCGAAGGTCATACTGGCGGATAAGCCCATCCTCA +
Preference number: 6 (lower is better)
Translates to: SWPQYSVRSISTSEC*LFSRRSYWRISPSS
Trigger: TGAGGATGGGCTTATCCGCCAGTATGACCTTCGAGAGAACAGCAAACACTCGGAGGTGCTGATTGACCTGACAGAGTACTGTGGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS GCA 72 bp AAAACAGATGTGCCAAGATTCCCAGCCTTGGAGGGCTaGTGCCTCATACTCTCAAGCAGAGGGAGGTTCCTT +
Preference number: 6 (lower is better)
Translates to: KTDVPRFPALEG*CLILSSRGRFL
Trigger: AAGGAACCTCCCTCTGCTTGAGAGTATGAGGCAGCAGCCCTCCAAGGCTGGGAATCTTGGCACATCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS GCA 72 bp AGTACACAGGGCACAGTTTTGAGCACAAAACAGATGTaGCAAGATTCCCAGCCTTGGAGGGCTGCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: STQGTVLSTKQM*QDSQPWRAAAS
Trigger: TGAGGCAGCAGCCCTCCAAGGCTGGGAATCTTGGCACATCTGTTTTGTGCTCAAAACTGTGCCCTGTGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CCA 72 bp GCTTCACCCGGTTTGTGTGGTCTCCAAACATGTGGATaGTCTCCTTTACTGTCAGGTCGTGCACATGCACCT +
Preference number: 6 (lower is better)
Translates to: ASPGLCGLQTCG*SPLLSGRAHAP
Trigger: AGGTGCATGTGCACGACCTGACAGTAAAGGAGACCATCCACATGTTTGGAGACCACACAAACCGGGTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp ATGCGCTTCACCCGGTTTGTGTGGTCTCCAAACATGTaGATGGTCTCCTTTACTGTCAGGTCGTGCACATGC +
Preference number: 6 (lower is better)
Translates to: MRFTRFVWSPNM*MVSFTVRSCTC
Trigger: GCATGTGCACGACCTGACAGTAAAGGAGACCATCCACATGTTTGGAGACCACACAAACCGGGTGAAGCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp CATTGCTATGAAGGTGCAGGCCATTGGACACACCGTTaGACACACCGTTGGTGGACATCTTGCCATTCTGGA +
Preference number: 6 (lower is better)
Translates to: HCYEGAGHWTHR*THRWWTSCHSG
Trigger: TCCAGAATGGCAAGATGTCCACCAACGGTGTGTCCAACGGTGTGTCCAATGGCCTGCACCTTCATAGCAATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 90 bp CCTTGGAGGGCTGCTGCCTCATACTCTCAAGCAGAGGGAGGTTCCTaGAATGCAGATAAAGAAACCAAGCTCTGGCACATGCAGACAGAG +
Preference number: 6 (lower is better)
Translates to: PWRAAASYSQAEGGS*NADKETKLWHMQTE
Trigger: CTCTGTCTGCATGTGCCAGAGCTTGGTTTCTTTATCTGCATTCAAGGAACCTCCCTCTGCTTGAGAGTATGAGGCAGCAGCCCTCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS TCA 72 bp TATACTGAGCGTTGCTGCCAAAGAAATTGGCCTCTTTaGTATCCGTGGTGGTGTTGCAGTGGCCGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: YTERCCQRNWPL*YPWWCCSGRSS
Trigger: GCTACTGCGGCCACTGCAACACCACCACGGATATCAAAGAGGCCAATTTCTTTGGCAGCAACGCTCAGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319394.8
ENST00000361771.7
CDS GCA 72 bp ATAGTGGTCACCATCCCACTTGCGCTTCATGTAGGCTaGTGCTCGGTTTCCATAAAGCATGGCATTGTGAGG +
Preference number: 6 (lower is better)
Translates to: IVVTIPLALHVG*CSVSIKHGIVR
Trigger: CCTCACAATGCCATGCTTTATGGAAACCGAGCAGCAGCCTACATGAAGCGCAAGTGGGATGGTGACCACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CCA 72 bp GAGGTGGGGGATGAAGGAGTAGTTCAGGCACTGCGCTaGAGGCTCTACTTGGGTTATCTTATTAGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: EVGDEGVVQALR*RLYLGYLISPC
Trigger: ACAAGGACTAATAAGATAACCCAAGTAGAGCCTCCAGCGCAGTGCCTGAACTACTCCTTCATCCCCCACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CCA 72 bp TACAGTGGCATGATCATGGCTCACTGTGGCCTTAACTaGTCCTCCAATGTCAACCTCCTGAATAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: YSGMIMAHCGLN*SSNVNLLNSWD
Trigger: GTCCCAGCTATTCAGGAGGTTGACATTGGAGGACCAGTTAAGGCCACAGTGAGCCATGATCATGCCACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CAA 72 bp CAGTACTCTGTCAGGTCAATCAGCACCTCCGAGTGTTaGCTGTTCTCTCGAAGGTCATACTGGCGGATAAGC +
Preference number: 6 (lower is better)
Translates to: QYSVRSISTSEC*LFSRRSYWRIS
Trigger: GCTTATCCGCCAGTATGACCTTCGAGAGAACAGCAAACACTCGGAGGTGCTGATTGACCTGACAGAGTACTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319394.8
ENST00000361771.7
ENST00000447062.2
ENST00000491239.2
CDS CAA 72 bp GCTGCTGCCTCATACTCTCAAGCAGAGGGAGGTTCCTaGAATGCAGATAAAGAAACCAAGCTCTGGCACATG +
Preference number: 6 (lower is better)
Translates to: AAASYSQAEGGS*NADKETKLWHM
Trigger: CATGTGCCAGAGCTTGGTTTCTTTATCTGCATTCAAGGAACCTCCCTCTGCTTGAGAGTATGAGGCAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CAA 90 bp GTGGGGGATGAAGGAGTAGTTCAGGCACTGCGCTGGAGGCTCTACTaGGGTTATCTTATTAGTCCTTGTTATGGCCTCATAAATGGGCAT +
Preference number: 6 (lower is better)
Translates to: VGDEGVVQALRWRLY*GYLISPCYGLINGH
Trigger: ATGCCCATTTATGAGGCCATAACAAGGACTAATAAGATAACCCAAGTAGAGCCTCCAGCGCAGTGCCTGAACTACTCCTTCATCCCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CAA 90 bp GTGTCTGAAACACAGAGTTTGTCCCTTAGTACACAGGGCACAGTTTaGAGCACAAAACAGATGTGCCAAGATTCCCAGCCTTGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: VSETQSLSLSTQGTV*STKQMCQDSQPWRA
Trigger: AGCCCTCCAAGGCTGGGAATCTTGGCACATCTGTTTTGTGCTCAAAACTGTGCCCTGTGTACTAAGGGACAAACTCTGTGTTTCAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS TCA 72 bp CACAGAGTTTGTCCCTTAGTACACAGGGCACAGTTTTaGGCACAAAACAGATGTGCCAAGATTCCCAGCCTT +
Preference number: 6 (lower is better)
Translates to: HRVCPLVHRAQF*AQNRCAKIPSL
Trigger: AAGGCTGGGAATCTTGGCACATCTGTTTTGTGCTCAAAACTGTGCCCTGTGTACTAAGGGACAAACTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CCA 72 bp CAAGACAGTCTCCCCTATAGTTCATTATTACCTCCTTaGGCCAGGATCATCTTACATCATCTCTCGGGTCTC +
Preference number: 6 (lower is better)
Translates to: QDSLPYSSLLPP*ARIILHHLSGL
Trigger: GAGACCCGAGAGATGATGTAAGATGATCCTGGCCCAAGGAGGTAATAATGAACTATAGGGGAGACTGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS CAA 72 bp GAAGGAGTAGTTCAGGCACTGCGCTGGAGGCTCTACTaGGGTTATCTTATTAGTCCTTGTTATGGCCTCATA +
Preference number: 6 (lower is better)
Translates to: EGVVQALRWRLY*GYLISPCYGLI
Trigger: TATGAGGCCATAACAAGGACTAATAAGATAACCCAAGTAGAGCCTCCAGCGCAGTGCCTGAACTACTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS TCA 72 bp TGTGTCTCACCTACCCAAAGAAAGTACATCTACAAATaGGGGGTGGGGATGATGGTGTCTGAAACACAGAGT +
Preference number: 6 (lower is better)
Translates to: CVSPTQRKYIYK*GVGMMVSETQS
Trigger: ACTCTGTGTTTCAGACACCATCATCCCCACCCCTCATTTGTAGATGTACTTTCTTTGGGTAGGTGAGACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491239.2
CDS TCA 72 bp CCCAAAGAAAGTACATCTACAAATGAGGGGTGGGGATaGTGGTGTCTGAAACACAGAGTTTGTCCCTTAGTA +
Preference number: 6 (lower is better)
Translates to: PKESTSTNEGWG*WCLKHRVCPLV
Trigger: TACTAAGGGACAAACTCTGTGTTTCAGACACCATCATCCCCACCCCTCATTTGTAGATGTACTTTCTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491239.2