RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR7 (Homo sapiens)

Ensembl gene IDs: ENSG00000091157

Ensembl transcript IDs: ENST00000254442.8, ENST00000357574.7, ENST00000585669.1, ENST00000585754.1, ENST00000585824.1, ENST00000586124.2, ENST00000587403.5, ENST00000589935.1, ENST00000590557.5, ENST00000591449.1, ENST00000591524.1, ENST00000593058.1, ENST00000615645.4

Found 761 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACAGATGGCACGAGCGGGTTCTGCCCCTGAGAAGCATGCACAAGTaGCAAGACCCGGCCGTGCCACTGGATGGCACTGGGGTGGGCAGG +
Preference number: 1 (lower is better)
Translates to: DRWHERVLPLRSMHK*QDPAVPLDGTGVGR
Trigger: CCTGCCCACCCCAGTGCCATCCAGTGGCACGGCCGGGTCTTGTCACTTGTGCATGCTTCTCAGGGGCAGAACCCGCTCGTGCCATCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CCA 90 bp AAGACCCGGCCGTGCCACTGGATGGCACTGGGGTGGGCAGGCCCCTaGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGG +
Preference number: 1 (lower is better)
Translates to: KTRPCHWMALGWAGP*EQSGVRKDRATSAW
Trigger: CCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCTGCCCACCCCAGTGCCATCCAGTGGCACGGCCGGGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR TCA 90 bp GTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTGCCCCTaGGAAGCATGCACAAGTGACAAGACCCGGCCGTGCCACTGGATG +
Preference number: 1 (lower is better)
Translates to: VRASESTDGTSGFCP*EACTSDKTRPCHWM
Trigger: CATCCAGTGGCACGGCCGGGTCTTGTCACTTGTGCATGCTTCTCAGGGGCAGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR GCA 90 bp AAAAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTaGGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTGCCCCT +
Preference number: 1 (lower is better)
Translates to: KNYLVTGWPHPAEHV*VPLNRQMARAGSAP
Trigger: AGGGGCAGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CCA 90 bp GTGCCACTGGATGGCACTGGGGTGGGCAGGCCCCTGGGAACAATCTaGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAG +
Preference number: 1 (lower is better)
Translates to: VPLDGTGVGRPLGTI*CEEGQSNIGLDNLE
Trigger: CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCTGCCCACCCCAGTGCCATCCAGTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR GCA 90 bp ATCTCTGGCAGGGAAAAACTACCTGGTGACAGGATGGCCACATCCTaGAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGC +
Preference number: 1 (lower is better)
Translates to: ISGREKLPGDRMATS*RACVRASESTDGTS
Trigger: GCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTTTTCCCTGCCAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CCA 90 bp CATCGTCCACCCCAGGGTTTTGCAGCCATAGCTTTCTACTGGCCTTaGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTT +
Preference number: 1 (lower is better)
Translates to: HRPPQGFAAIAFYWP*LPVQTEYVKGLPTL
Trigger: AAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGCTATGGCTGCAAAACCCTGGGGTGGACGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CCA 90 bp TGTGCTTCTGTTGCACCAAGCAACAAGAGCGTTCCCAGGAACCACTaGCTTTCCCCTGCCATCTCTGGCAGGGAAAAACTACCTGGTGAC +
Preference number: 1 (lower is better)
Translates to: CASVAPSNKSVPRNH*LSPAISGREKLPGD
Trigger: GTCACCAGGTAGTTTTTCCCTGCCAGAGATGGCAGGGGAAAGCCAGTGGTTCCTGGGAACGCTCTTGTTGCTTGGTGCAACAGAAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CCA 90 bp ATCAAACATCGTCCACCCCAGGGTTTTGCAGCCATAGCTTTCTACTaGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCC +
Preference number: 1 (lower is better)
Translates to: IKHRPPQGFAAIAFY*PWLPVQTEYVKGLP
Trigger: GGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGCTATGGCTGCAAAACCCTGGGGTGGACGATGTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR TCA 90 bp ATGGATTGTCTGACATTTTCCAGTCCGGATGTCGTACAGGGCCACTaGACCATGGCGAGCTCCAACTGCTATTCTGTGATTCCGCTCATA +
Preference number: 1 (lower is better)
Translates to: MDCLTFSSPDVVQGH*TMASSNCYSVIPLI
Trigger: TATGAGCGGAATCACAGAATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGACATCCGGACTGGAAAATGTCAGACAATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
3UTR CCA 90 bp TCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGTTGAGATaGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGTTT +
Preference number: 1 (lower is better)
Translates to: SERPDSSSTSEVRLR*LKMLIWAGSAITVF
Trigger: AAACACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR TCA 90 bp ATAAATCCCTCCCCTCCTGCTTCCACATGGAGTTCCTCAGCAGCATaGATGGTCTTGATTATCTCCACCCTTTCTAGACATTTCAGGCTT +
Preference number: 1 (lower is better)
Translates to: INPSPPASTWSSSAA*MVLIISTLSRHFRL
Trigger: AAGCCTGAAATGTCTAGAAAGGGTGGAGATAATCAAGACCATTCATGCTGCTGAGGAACTCCATGTGGAAGCAGGAGGGGAGGGATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585669.1
3UTR TCA 90 bp GCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGTTTATTaGTTTTTGTGCTTCTGTTGCACCAAGCAACAAGAGCGTTCCCAG +
Preference number: 1 (lower is better)
Translates to: AKNADLGWECNHSVY*FLCFCCTKQQERSQ
Trigger: CTGGGAACGCTCTTGTTGCTTGGTGCAACAGAAGCACAAAAATCAATAAACACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR GCA 90 bp GCTAGAAGTCTTATACTGTGCTATGAAAATAAATCCCTCCCCTCCTaGTTCCACATGGAGTTCCTCAGCAGCATGAATGGTCTTGATTAT +
Preference number: 1 (lower is better)
Translates to: ARSLILCYENKSLPS*FHMEFLSSMNGLDY
Trigger: ATAATCAAGACCATTCATGCTGCTGAGGAACTCCATGTGGAAGCAGGAGGGGAGGGATTTATTTTCATAGCACAGTATAAGACTTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585669.1
3UTR TCA 90 bp CTAACTCACTGGACAGCAATCACATTCCTAAGTAAATGTCCGTCATaGTGGGACTTGGCATTTTCGTGGGTTTTGATTTGGGTTATGGTT +
Preference number: 1 (lower is better)
Translates to: LTHWTAITFLSKCPS*WDLAFSWVLIWVMV
Trigger: AACCATAACCCAAATCAAAACCCACGAAAATGCCAAGTCCCATCATGACGGACATTTACTTAGGAATGTGATTGCTGTCCAGTGAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585669.1
3UTR TCA 90 bp CATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAATaGAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATAC +
Preference number: 1 (lower is better)
Translates to: HTGVTSCHLLLVNYQ*SHICLYIYKDRSKY
Trigger: GTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTCATTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR GCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTGACAAGACCCGGCCGTaGCACTGGATGGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLDKTRP*HWMALG
Trigger: CCCCAGTGCCATCCAGTGGCACGGCCGGGTCTTGTC...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGCCGTGCCACTGGATaGCACTGGGGTGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSGRATG*HWGGQA
Trigger: GGCCTGCCCACCCCAGTGCCATCCAGTGGCACGGCC...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTACCCGGCCGTGCCACTaGATGGCACTGGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSTRPCH*MALGWA
Trigger: TGCCCACCCCAGTGCCATCCAGTGGCACGGCCGGGT...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGACCCGGCCGTGCCACTaGATGGCACTGGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRTRPCH*MALGWA
Trigger: TGCCCACCCCAGTGCCATCCAGTGGCACGGCCGGGT...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGACCCGGCCGTGCCACTaGATGGCACTGGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVTRPCH*MALGWA
Trigger: TGCCCACCCCAGTGCCATCCAGTGGCACGGCCGGGT...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR GCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGACAAGACCCGGCCGTaGCACTGGATGGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: TSTPSVRTARFKQHFRGADKTRP*HWMALG
Trigger: CCCCAGTGCCATCCAGTGGCACGGCCGGGTCTTGTC...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR GCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGAGGATGGCCACATCCTaGAGAGCATGTGTGCGTGCC +
Preference number: 2 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVRMATS*RACVRA
Trigger: GGCACGCACACATGCTCTGCAGGATGTGGCCATCCT...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR GCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGTGTTTGCGGCAGGCTaGCTACCACTCTCACACCTC +
Preference number: 2 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSVFAAG*LPLSHL
Trigger: GAGGTGTGAGAGTGGTAGGCAGCCTGCCGCAAACAC...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CAA 90 bp CGTCCACCCCAGGGTTTTGCAGCCATAGCTTTCTACTGGCCTTGGTaGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTG +
Preference number: 2 (lower is better)
Translates to: RPPQGFAAIAFYWPW*PVQTEYVKGLPTLV
Trigger: CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGCTATGGCTGCAAAACCCTGGGGTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTAGAAGCATGCACAAGTaGCAAGACCCGGCCGTGCCA +
Preference number: 2 (lower is better)
Translates to: KLPGDRMATSCRACVRASRSMHK*QDPAVP
Trigger: TGGCACGGCCGGGTCTTGTCACTTGTGCATGCTTCT...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTTACACGCTATGCTTCTaGACTTGGCTCTTTATCACA +
Preference number: 2 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLYTLCF*TWLFIT
Trigger: TGTGATAAAGAGCCAAGTTCAGAAGCATAGCGTGTA...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR GCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTCCTGCAGAGCATGTGTaGGTGCCTCTGAATCGACAG +
Preference number: 2 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSPAEHV*VPLNRQ
Trigger: CTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGCCCCTGGGAACAATCTaGTGTGAGGAAGGACAGAGC +
Preference number: 2 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRPLGTI*CEEGQS
Trigger: GCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGG...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CAA 90 bp ACATCGTCCACCCCAGGGTTTTGCAGCCATAGCTTTCTACTGGCCTaGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCT +
Preference number: 2 (lower is better)
Translates to: TSSTPGFCSHSFLLA*VACADGIRERPTHA
Trigger: AGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGCTATGGCTGCAAAACCCTGGGGTGGACGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCGGGAACAATCTGGTGTaGGGAAGGACAGAGCAACAT +
Preference number: 2 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCGNNLV*GRTEQH
Trigger: ATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCC...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR GCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTTCAATCGTGAGGACTaGCACATGACCTCAACACCC +
Preference number: 2 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCFNRED*HMTSTP
Trigger: GGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAA...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGAGAAGCATGCACAAGTaGCAAGACCCGGCCGTGCCA +
Preference number: 2 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVRSMHK*QDPAVP
Trigger: TGGCACGGCCGGGTCTTGTCACTTGTGCATGCTTCT...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCCCCTGCCATCTCTaGCAGGGAAAAACTACCTGG +
Preference number: 2 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHFPCHL*QGKTTW
Trigger: CCAGGTAGTTTTTCCCTGCCAGAGATGGCAGGGGAA...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACGGGAACAATCTGGTGTaGGGAAGGACAGAGCAACAT +
Preference number: 2 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHGNNLV*GRTEQH
Trigger: ATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCC...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR GCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGCCTGCAGAGCATGTGTaGGTGCCTCTGAATCGACAG +
Preference number: 2 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVPAEHV*VPLNRQ
Trigger: CTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR GCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTACTCCTGAACATTTGTaGCATAGTTATTACTTTTCC +
Preference number: 2 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLTPEHL*HSYYFS
Trigger: GGAAAAGTAATAACTATGGCACAAATGTTCAGGAGT...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTAATGCTGATCTGGGCTaGGAGTGCAATCACAGTGTT +
Preference number: 2 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSNADLG*ECNHSV
Trigger: AACACTGTGATTGCACTCCCAGCCCAGATCAGCATT...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp GTCCGGATGTCGTACAGGGCCACTGAACCATGGCGAGCTCCAACTGCTATTCTGGAACCTGCAGATGGCTaGGAAACATTCTTGAAGACC +
Preference number: 2 (lower is better)
Translates to: VRMSYRATEPWRAPTAILEPADG*ETFLKT
Trigger: GGTCTTCAAGAATGTTTCCCAGCCATCTGCAGGTTC...CAGAATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGACATCCGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591449.1
3UTR-3UTR TCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTACACGCTATGCTTCTaGACTTGGCTCTTTATCACA +
Preference number: 2 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCYTLCF*TWLFIT
Trigger: TGTGATAAAGAGCCAAGTTCAGAAGCATAGCGTGTA...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR GCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTTTTTGTGCTTCTGTTaGACCAAGCAACAAGAGCGT +
Preference number: 2 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCFLCFC*TKQQER
Trigger: ACGCTCTTGTTGCTTGGTGCAACAGAAGCACAAAAA...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACGGCCGTGCCACTGGATaGCACTGGGGTGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: SELGSLSQKSLQEISYSDGRATG*HWGGQA
Trigger: GGCCTGCCCACCCCAGTGCCATCCAGTGGCACGGCC...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGTTCCCCTGCCATCTCTaGCAGGGAAAAACTACCTGG +
Preference number: 2 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVFPCHL*QGKTTW
Trigger: CCAGGTAGTTTTTCCCTGCCAGAGATGGCAGGGGAA...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACAATGCTGATCTGGGCTaGGAGTGCAATCACAGTGTT +
Preference number: 2 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHNADLG*ECNHSV
Trigger: AACACTGTGATTGCACTCCCAGCCCAGATCAGCATT...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGCTAAAAATGCTGATCTaGGCTGGGAGTGCAATCACA +
Preference number: 2 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVLKMLI*AGSAIT
Trigger: TGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAG...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCCATATGCCACACATATaGGAACTACAGGATTGCAAG +
Preference number: 2 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCHMPHI*ELQDCK
Trigger: CTTGCAATCCTGTAGTTCCCATATGTGTGGCATATG...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACGGCCGTGCCACTGGATaGCACTGGGGTGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: YASELGSLSQKSLQEISYGRATG*HWGGQA
Trigger: GGCCTGCCCACCCCAGTGCCATCCAGTGGCACGGCC...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGGCCTACCCACGCTTGTaGCCCAGGGCTATTGCTCCT +
Preference number: 2 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVAYPRL*PRAIAP
Trigger: AGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGC...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CAA 90 bp GGGCTGGGAGTGCAATCACAGTGTTTATTGATTTTTGTGCTTCTGTaGCACCAAGCAACAAGAGCGTTCCCAGGAACCACTGGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: GLGVQSQCLLIFVLL*HQATRAFPGTTGFP
Trigger: GGGAAAGCCAGTGGTTCCTGGGAACGCTCTTGTTGCTTGGTGCAACAGAAGCACAAAAATCAATAAACACTGTGATTGCACTCCCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAAGCGGGTTCTGCCCCTaGGAAGCATGCACAAGTGAC +
Preference number: 2 (lower is better)
Translates to: EMSGEADILIHSLYTGSSSGFCP*EACTSD
Trigger: GTCACTTGTGCATGCTTCTCAGGGGCAGAACCCGCT...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGAGCGGGTTCTGCCCCTaGGAAGCATGCACAAGTGAC +
Preference number: 2 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVSGFCP*EACTSD
Trigger: GTCACTTGTGCATGCTTCTCAGGGGCAGAACCCGCT...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTATGTGTGCGTGCCTCTaGATCGACAGATGGCACGAG +
Preference number: 2 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSMCACL*IDRWHE
Trigger: CTCGTGCCATCTGTCGATTCAGAGGCACGCACACAT...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR GCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTTTTGTGCTTCTGTTaGACCAAGCAACAAGAGCGT +
Preference number: 2 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHFLCFC*TKQQER
Trigger: ACGCTCTTGTTGCTTGGTGCAACAGAAGCACAAAAA...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGATGTGTGCGTGCCTCTaGATCGACAGATGGCACGAG +
Preference number: 2 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVMCACL*IDRWHE
Trigger: CTCGTGCCATCTGTCGATTCAGAGGCACGCACACAT...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGGTGAGGACTGCCACATaGCCTCAACACCCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVVRTAT*PQHPVS
Trigger: TGACACTGGGTGTTGAGGTCATGTGGCAGTCCTCAC...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGTGAGGACTGCCACATaGCCTCAACACCCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: EMSGEADILIHSLYTGSSVRTAT*PQHPVS
Trigger: TGACACTGGGTGTTGAGGTCATGTGGCAGTCCTCAC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp CATGGATTGTCTGACATTTTCCAGTCCGGATGTCGTACAGGGCCACTGAACCATTCCGCTCATAATAGCTaGCCATGTAGAACCTGCAGA +
Preference number: 2 (lower is better)
Translates to: HGLSDIFQSGCRTGPLNHSAHNS*PCRTCR
Trigger: TCTGCAGGTTCTACATGGTCAGCTATTATGAGCGGA...ATGGTTCAGTGGCCCTGTACGACATCCGGACTGGAAAATGTCAGACAATCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
3UTR-3UTR TCA 90 bp TCCGGATGTCGTACAGGGCCACTGAACCATGGCGAGCTCCAACTGCTATTCTGTGCTGGGAAACATTCTTaGAGACCTTTCTTTTTAACT +
Preference number: 2 (lower is better)
Translates to: SGCRTGPLNHGELQLLFCAGKHS*RPFFLT
Trigger: AGTTAAAAAGAAAGGTCTTCAAGAATGTTTCCCAGC...ACAGAATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGACATCCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591449.1
3UTR-3UTR GCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCATTCAATCGTGAGGACTaGCACATGACCTCAACACCC +
Preference number: 2 (lower is better)
Translates to: EMSGEADILIHSLYTGSSFNRED*HMTSTP
Trigger: GGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAA...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp TTTACATGGCAGGACTTCAGCAGACACATGTACACACTAACTCACTGGACAGCAAGTAAATGTCCGTCATaGTGGGACTTGGCATTTTCG +
Preference number: 2 (lower is better)
Translates to: FTWQDFSRHMYTLTHWTASKCPS*WDLAFS
Trigger: CGAAAATGCCAAGTCCCATCATGACGGACATTTACT...TGCTGTCCAGTGAGTTAGTGTGTACATGTGTCTGCTGAAGTCCTGCCATGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585669.1
3UTR-3UTR CCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACACCCCTGGGAACAATCTaGTGTGAGGAAGGACAGAGC +
Preference number: 2 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETPLGTI*CEEGQS
Trigger: GCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGG...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCTTCCCCTGCCATCTCTaGCAGGGAAAAACTACCTGG +
Preference number: 2 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFFPCHL*QGKTTW
Trigger: CCAGGTAGTTTTTCCCTGCCAGAGATGGCAGGGGAA...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGCCATAGCTTTCTACTaGCCTTGGTTGCCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFAIAFY*PWLPVQ
Trigger: CTGCACAGGCAACCAAGGCCAGTAGAAAGCTATGGC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACGGAAAAACTACCTGGTaGCAGGATGGCCACATCCTG +
Preference number: 2 (lower is better)
Translates to: SELGSLSQKSLQEISYSDGKTTW*QDGHIL
Trigger: CAGGATGTGGCCATCCTGTCACCAGGTAGTTTTTCC...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAGGAAAAACTACCTGGTaGCAGGATGGCCACATCCTG +
Preference number: 2 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETGKTTW*QDGHIL
Trigger: CAGGATGTGGCCATCCTGTCACCAGGTAGTTTTTCC...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAGGGAACAATCTGGTGTaGGGAAGGACAGAGCAACAT +
Preference number: 2 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETGNNLV*GRTEQH
Trigger: ATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCC...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAAGAACCAGCACAATCTaGCATAAGAAGAAAGTGGTC +
Preference number: 2 (lower is better)
Translates to: EMSGEADILIHSLYTGSSRTSTI*HKKKVV
Trigger: GACCACTTTCTTCTTATGTCAGATTGTGCTGGTTCT...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGCATATGCCACACATATaGGAACTACAGGATTGCAAG +
Preference number: 2 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVHMPHI*ELQDCK
Trigger: CTTGCAATCCTGTAGTTCCCATATGTGTGGCATATG...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp TCTAGACATTTCAGGCTTTTACATGGCAGGACTTCAGCAGACACATGTACACACCATTTTCGTGGGTTTTaGTTTGGGTTATGGTTAACG +
Preference number: 2 (lower is better)
Translates to: SRHFRLLHGRTSADTCTHHFRGF*FGLWLT
Trigger: CGTTAACCATAACCCAAATCAAAACCCACGAAAATG...GTGTGTACATGTGTCTGCTGAAGTCCTGCCATGTAAAAGCCTGAAATGTCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585669.1
3UTR-3UTR GCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACATGGGAACTACAGGATTaGAAGTTTTCCGGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETWELQD*KFSGGK
Trigger: CTTTCCCCCGGAAAACTTGCAATCCTGTAGTTCCCA...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACAATGCTGATCTGGGCTaGGAGTGCAATCACAGTGTT +
Preference number: 2 (lower is better)
Translates to: SELGSLSQKSLQEISYSDNADLG*ECNHSV
Trigger: AACACTGTGATTGCACTCCCAGCCCAGATCAGCATT...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAGAACCAGCACAATCTaGCATAAGAAGAAAGTGGTC +
Preference number: 2 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFRTSTI*HKKKVV
Trigger: GACCACTTTCTTCTTATGTCAGATTGTGCTGGTTCT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR GCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAATCCACCCCAGGGTTTTaGAGCCATAGCTTTCTACTG +
Preference number: 2 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQSTPGF*SHSFLL
Trigger: CAGTAGAAAGCTATGGCTGCAAAACCCTGGGGTGGA...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACCTAAAAATGCTGATCTaGGCTGGGAGTGCAATCACA +
Preference number: 2 (lower is better)
Translates to: SELGSLSQKSLQEISYSDLKMLI*AGSAIT
Trigger: TGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAG...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp ATTATCTCCACCCTTTCTAGACATTTCAGGCTTTTACATGGCAGGACTTCAGCATACACACTAACTCACTaGACAGCAATCACATTCCTA +
Preference number: 2 (lower is better)
Translates to: IISTLSRHFRLLHGRTSAYTLTH*TAITFL
Trigger: TAGGAATGTGATTGCTGTCCAGTGAGTTAGTGTGTA...TGCTGAAGTCCTGCCATGTAAAAGCCTGAAATGTCTAGAAAGGGTGGAGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585669.1
3UTR-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCATTAAAGGTGTACGCTaGGATGACAATGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFIKGVR*DDNAEF
Trigger: AAACTCTGCATTGTCATCCCAGCGTACACCTTTAAT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAATTAAAGGTGTACGCTaGGATGACAATGCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQIKGVR*DDNAEF
Trigger: AAACTCTGCATTGTCATCCCAGCGTACACCTTTAAT...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CAA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTGAGCCATCCGTGTGTTaGCGGCAGGCTGCCTACCAC +
Preference number: 3 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLEPSVC*RQAAYH
Trigger: GTGGTAGGCAGCCTGCCGCAAACACACGGATGGCTC...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR TCA 72 bp CACGAGCGGGTTCTGCCCCTGAGAAGCATGCACAAGTaGCAAGACCCGGCCGTGCCACTGGATGGCACTGGG +
Preference number: 3 (lower is better)
Translates to: HERVLPLRSMHK*QDPAVPLDGTG
Trigger: CCCAGTGCCATCCAGTGGCACGGCCGGGTCTTGTCACTTGTGCATGCTTCTCAGGGGCAGAACCCGCTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CCA 72 bp CATGCACAAGTGACAAGACCCGGCCGTGCCACTGGATaGCACTGGGGTGGGCAGGCCCCTGGGAACAATCTG +
Preference number: 3 (lower is better)
Translates to: HAQVTRPGRATG*HWGGQAPGNNL
Trigger: CAGATTGTTCCCAGGGGCCTGCCCACCCCAGTGCCATCCAGTGGCACGGCCGGGTCTTGTCACTTGTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR TCA 72 bp GATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTaGATCGACAGATGGCACGAGCGGGTTCTGCCCCTG +
Preference number: 3 (lower is better)
Translates to: DGHILQSMCACL*IDRWHERVLPL
Trigger: CAGGGGCAGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGGATGTGGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CAA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGAGCCATCCGTGTGTTaGCGGCAGGCTGCCTACCAC +
Preference number: 3 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSEPSVC*RQAAYH
Trigger: GTGGTAGGCAGCCTGCCGCAAACACACGGATGGCTC...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR TCA 72 bp TCTGAATCGACAGATGGCACGAGCGGGTTCTGCCCCTaGGAAGCATGCACAAGTGACAAGACCCGGCCGTGC +
Preference number: 3 (lower is better)
Translates to: SESTDGTSGFCP*EACTSDKTRPC
Trigger: GCACGGCCGGGTCTTGTCACTTGTGCATGCTTCTCAGGGGCAGAACCCGCTCGTGCCATCTGTCGATTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR GCA 72 bp CTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTaGGTGCCTCTGAATCGACAGATGGCACGAGCGGGT +
Preference number: 3 (lower is better)
Translates to: LVTGWPHPAEHV*VPLNRQMARAG
Trigger: ACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR GCA 72 bp GTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTaGTCCTCTGGGCCCCCTGGCTTTGTTCTCAACCTT +
Preference number: 3 (lower is better)
Translates to: VKGLPTLVAQGY*SSGPPGFVLNL
Trigger: AAGGTTGAGAACAAAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR TCA 72 bp TCTACTGGCCTTGGTTGCCTGTGCAGACGGAATACGTaGAAGGCCTACCCACGCTTGTGGCCCAGGGCTATT +
Preference number: 3 (lower is better)
Translates to: STGLGCLCRRNT*KAYPRLWPRAI
Trigger: AATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CCA 72 bp CCCCAGGGTTTTGCAGCCATAGCTTTCTACTGGCCTTaGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTA +
Preference number: 3 (lower is better)
Translates to: PQGFAAIAFYWP*LPVQTEYVKGL
Trigger: TAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGCTATGGCTGCAAAACCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CCA 72 bp CGTCCACCCCAGGGTTTTGCAGCCATAGCTTTCTACTaGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAA +
Preference number: 3 (lower is better)
Translates to: RPPQGFAAIAFY*PWLPVQTEYVK
Trigger: TTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGCTATGGCTGCAAAACCCTGGGGTGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR GCA 72 bp AGGGAAAAACTACCTGGTGACAGGATGGCCACATCCTaGAGAGCATGTGTGCGTGCCTCTGAATCGACAGAT +
Preference number: 3 (lower is better)
Translates to: REKLPGDRMATS*RACVRASESTD
Trigger: ATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTTTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CAA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCGCTATGCTTCTGAACTaGGCTCTTTATCACAAAAGT +
Preference number: 3 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCAMLLN*ALYHKS
Trigger: ACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATAGC...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR TCA 72 bp CTGACATTTTCCAGTCCGGATGTCGTACAGGGCCACTaGACCATGGCGAGCTCCAACTGCTATTCTGTGATT +
Preference number: 3 (lower is better)
Translates to: LTFSSPDVVQGH*TMASSNCYSVI
Trigger: AATCACAGAATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGACATCCGGACTGGAAAATGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
3UTR GCA 72 bp CCGTCTAATCATCAAACATCGTCCACCCCAGGGTTTTaGAGCCATAGCTTTCTACTGGCCTTGGTTGCCTGT +
Preference number: 3 (lower is better)
Translates to: PSNHQTSSTPGF*SHSFLLALVAC
Trigger: ACAGGCAACCAAGGCCAGTAGAAAGCTATGGCTGCAAAACCCTGGGGTGGACGATGTTTGATGATTAGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CCA 72 bp CCAGATTCAAGCAGCACTTCAGAGGTGCGGTTGAGATaGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATC +
Preference number: 3 (lower is better)
Translates to: PDSSSTSEVRLR*LKMLIWAGSAI
Trigger: GATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCACCTCTGAAGTGCTGCTTGAATCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CAA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGCTATGCTTCTGAACTaGGCTCTTTATCACAAAAGT +
Preference number: 3 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSAMLLN*ALYHKS
Trigger: ACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATAGC...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CAA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCAGGAACAGTATAGATTaGCCGTCAATGGAAATAACA +
Preference number: 3 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCRNSID*PSMEIT
Trigger: TGTTATTTCCATTGACGGCAAATCTATACTGTTCCT...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR GCA 72 bp GGTGGCAAGATATCTTCCATCAGGAGCAAAAGCCACTaGAGTGATTGGTCCCTTGTGTCCATGGATTGTCTG +
Preference number: 3 (lower is better)
Translates to: GGKISSIRSKSH*SDWSLVSMDCL
Trigger: CAGACAATCCATGGACACAAGGGACCAATCACTGCAGTGGCTTTTGCTCCTGATGGAAGATATCTTGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
3UTR-3UTR CAA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAAGGCCTACCCACGCTaGTGGCCCAGGGCTATTGCT +
Preference number: 3 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFKAYPR*WPRAIA
Trigger: AGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR TCA 72 bp CAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATaGCCTCAACACCCAGTGTCAGAACGGCCAGATTCA +
Preference number: 3 (lower is better)
Translates to: QRAIISIVRTAT*PQHPVSERPDS
Trigger: TGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR GCA 72 bp GGTAATTCAAAGGGCAATAATTTCAATCGTGAGGACTaGCACATGACCTCAACACCCAGTGTCAGAACGGCC +
Preference number: 3 (lower is better)
Translates to: GNSKGNNFNRED*HMTSTPSVRTA
Trigger: GGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGAATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CAA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCATTCTACTGGCCTTGGTaGCCTGTGCAGACGGAATAC +
Preference number: 3 (lower is better)
Translates to: EMSGEADILIHSLYTGSSFYWPW*PVQTEY
Trigger: GTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGAA...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CAA 90 bp CATGGATTGTCTGACATTTTCCAGTCCGGATGTCGTACAGGGCCACTGAACCATGGCTGGGAAACATTCTaGAAGACCTTTCTTTTTAAC +
Preference number: 3 (lower is better)
Translates to: HGLSDIFQSGCRTGPLNHGWETF*KTFLFN
Trigger: GTTAAAAAGAAAGGTCTTCAAGAATGTTTCCCAGCC...ATGGTTCAGTGGCCCTGTACGACATCCGGACTGGAAAATGTCAGACAATCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591449.1
3UTR TCA 72 bp CTCCAACTGCTATTCTGTGATTCCGCTCATAATAGCTaGCCATGTAGAACCTGCAGATGGCTGGGAAACATT +
Preference number: 3 (lower is better)
Translates to: LQLLFCDSAHNS*PCRTCRWLGNI
Trigger: AATGTTTCCCAGCCATCTGCAGGTTCTACATGGTCAGCTATTATGAGCGGAATCACAGAATAGCAGTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591449.1
3UTR-3UTR CAA 90 bp TCTAGACATTTCAGGCTTTTACATGGCAGGACTTCAGCAGACACATGTACACACTTAACGGAAGATGGTTaGGTTAGAGCAGTAGGTCAG +
Preference number: 3 (lower is better)
Translates to: SRHFRLLHGRTSADTCTHLTEDG*VRAVGQ
Trigger: CTGACCTACTGCTCTAACCAAACCATCTTCCGTTAA...GTGTGTACATGTGTCTGCTGAAGTCCTGCCATGTAAAAGCCTGAAATGTCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585669.1
3UTR TCA 72 bp GTCCGTCATGATGGGACTTGGCATTTTCGTGGGTTTTaGTTTGGGTTATGGTTAACGGAAGATGGTTTGGTT +
Preference number: 3 (lower is better)
Translates to: VRHDGTWHFRGF*FGLWLTEDGLV
Trigger: AACCAAACCATCTTCCGTTAACCATAACCCAAATCAAAACCCACGAAAATGCCAAGTCCCATCATGACGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585669.1
3UTR-3UTR CAA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAAGCTTTCTACTGGCCTaGGTTGCCTGTGCAGACGGA +
Preference number: 3 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQSFLLA*VACADG
Trigger: TCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGCT...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR TCA 72 bp TGGACAGCAATCACATTCCTAAGTAAATGTCCGTCATaGTGGGACTTGGCATTTTCGTGGGTTTTGATTTGG +
Preference number: 3 (lower is better)
Translates to: WTAITFLSKCPS*WDLAFSWVLIW
Trigger: CCAAATCAAAACCCACGAAAATGCCAAGTCCCATCATGACGGACATTTACTTAGGAATGTGATTGCTGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585669.1
3UTR-3UTR CAA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACATTTTTGTGCTTCTGTaGCACCAAGCAACAAGAGCG +
Preference number: 3 (lower is better)
Translates to: YASELGSLSQKSLQEISYIFVLL*HQATRA
Trigger: CGCTCTTGTTGCTTGGTGCAACAGAAGCACAAAAAT...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR-3UTR CAA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAGCTATGCTTCTGAACTaGGCTCTTTATCACAAAAGT +
Preference number: 3 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQAMLLN*ALYHKS
Trigger: ACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATAGC...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTGGCCGAGTCAGCTGCTaGGCTCAGAGGCAACCCCAT +
Preference number: 4 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLGRVSC*AQRQPH
Trigger: ATGGGGTTGCCTCTGAGCCCAGCAGCTGACTCGGCC...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTACGGAGGATGCGGGGTaGGTAGATCCTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLTEDAG*VDPAGI
Trigger: TATCCCAGCAGGATCTACGCACCCCGCATCCTCCGT...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTATGAGCGAGAGGGCATaGCTCGCAGAGCGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSMSERA*LAERAE
Trigger: CTCGGCCCGCTCTGCGAGGCATGCCCTCTCGCTCAT...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTGACAAGACCCGGCCGTaGCACTGGATGGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSDKTRP*HWMALG
Trigger: CCCCAGTGCCATCCAGTGGCACGGCCGGGTCTTGTC...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGAGCTTGAGGGCATTGTaGGAGCCGGGGGACGCGGGC +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRSLRAL*EPGDAG
Trigger: GCCCGCGTCCCCCGGCTCCCACAATGCCCTCAAGCT...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTTGCTCCTTCCCGTCATaGGCCATGAGGATGACGTTG +
Preference number: 4 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLCSFPS*AMRMTL
Trigger: CAACGTCATCCTCATGGCCCATGACGGGAAGGAGCA...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATGGCCGTGCCACTGGATaGCACTGGGGTGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDGRATG*HWGGQA
Trigger: GGCCTGCCCACCCCAGTGCCATCCAGTGGCACGGCC...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTGGCCGTGCCACTGGATaGCACTGGGGTGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASGRATG*HWGGQA
Trigger: GGCCTGCCCACCCCAGTGCCATCCAGTGGCACGGCC...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGCCGCCGTCTCCCCAGTaGTACTGCAAGGTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVPPSPQ*YCKVPV
Trigger: CACCGGCACCTTGCAGTATCACTGGGGAGACGGCGG...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCGGAGATGCTGTGTGGTaGCGGCACGGGACACTCCGT +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCGDAVW*RHGTLR
Trigger: ACGGAGTGTCCCGTGCCGTCACCACACAGCATCTCC...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATGCGGGCCGAGTCAGCTaGTGGGCTCAGAGGCAACCC +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDAGRVS*WAQRQP
Trigger: GGGTTGCCTCTGAGCCCAGCAGCTGACTCGGCCCGC...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGCTATCAGACCGCCGGTaGGCGCCCCAGCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGALSDRR*APQPRR
Trigger: CCTCCTTGGCTGGGGCGCCCACCGGCGGTCTGATAG...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACCTATCAGACCGCCGGTaGGCGCCCCAGCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHLSDRR*APQPRR
Trigger: CCTCCTTGGCTGGGGCGCCCACCGGCGGTCTGATAG...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCGGCCGAGTCAGCTGCTaGGCTCAGAGGCAACCCCAT +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCGRVSC*AQRQPH
Trigger: ATGGGGTTGCCTCTGAGCCCAGCAGCTGACTCGGCC...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGAGCTTGAGGGCATTGTaGGAGCCGGGGGACGCGGGC +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGASLRAL*EPGDAG
Trigger: GCCCGCGTCCCCCGGCTCCCACAATGCCCTCAAGCT...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTTTCCCCTGCCATCTCTaGCAGGGAAAAACTACCTGG +
Preference number: 4 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLFPCHL*QGKTTW
Trigger: CCAGGTAGTTTTTCCCTGCCAGAGATGGCAGGGGAA...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGCCGCCGTCTCCCCAGTaGTACTGCAAGGTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAPPSPQ*YCKVPV
Trigger: CACCGGCACCTTGCAGTATCACTGGGGAGACGGCGG...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATCCGCCGTCTCCCCAGTaGTACTGCAAGGTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDPPSPQ*YCKVPV
Trigger: CACCGGCACCTTGCAGTATCACTGGGGAGACGGCGG...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR TCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGAGATGCTGTGTGGTaGCGGCACGGGACACTCCGT +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSGDAVW*RHGTLR
Trigger: ACGGAGTGTCCCGTGCCGTCACCACACAGCATCTCC...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCGGGGTGCGTAGATCCTaGTGGGATAATCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCGVRRS*WDNPWG
Trigger: GCCCCACGGATTATCCCAGCAGGATCTACGCACCCC...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTGTGCGTAGATCCTGCTaGGATAATCCGTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSVRRSC*DNPWGG
Trigger: GCCGCCCCACGGATTATCCCAGCAGGATCTACGCAC...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTTCATGCTCTTCCTCCTaGACTTTTGCTTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLSCSSS*TFASGP
Trigger: AGGGCCTGAAGCAAAAGTCCAGGAGGAAGAGCATGA...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGGCCGAGTCAGCTGCTaGGCTCAGAGGCAACCCCAT +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVGRVSC*AQRQPH
Trigger: ATGGGGTTGCCTCTGAGCCCAGCAGCTGACTCGGCC...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTGGAGATGCTGTGTGGTaGCGGCACGGGACACTCCGT +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASGDAVW*RHGTLR
Trigger: ACGGAGTGTCCCGTGCCGTCACCACACAGCATCTCC...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTGAGGCAACCCCATTGTaGTGTTGGCAAGTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLEATPL*CWQVVS
Trigger: AGAAACAACTTGCCAACATCACAATGGGGTTGCCTC...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTTCCGCTCATAATAGCTaGCCATGTAGAACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLSAHNS*PCRTCR
Trigger: TCTGCAGGTTCTACATGGTCAGCTATTATGAGCGGA...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTAGCGGGTTCTGCCCCTaGGAAGCATGCACAAGTGAC +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSSGFCP*EACTSD
Trigger: GTCACTTGTGCATGCTTCTCAGGGGCAGAACCCGCT...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGGGGGTGCGTAGATCCTaGTGGGATAATCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRGVRRS*WDNPWG
Trigger: GCCCCACGGATTATCCCAGCAGGATCTACGCACCCC...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGCGGAACTACGGAGGATaGGGGGTGCGTAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVRNYGG*GVRRSC
Trigger: GCAGGATCTACGCACCCCGCATCCTCCGTAGTTCCG...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCGTGCCGAGTTCAGCATaGCGATGCTTCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCVPSSA*RCFPAV
Trigger: CACTGCTGGGAAGCATCGGCATGCTGAACTCGGCAC...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGTGCGTAGATCCTGCTaGGATAATCCGTGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSVRRSC*DNPWGG
Trigger: GCCGCCCCACGGATTATCCCAGCAGGATCTACGCAC...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACGTCGTACAGGGCCACTaGACCATGGCGAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHVVQGH*TMASSN
Trigger: GTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGAC...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGTCGTACAGGGCCACTaGACCATGGCGAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAVVQGH*TMASSN
Trigger: GTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGAC...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCATGTGTGCGTGCCTCTaGATCGACAGATGGCACGAG +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCMCACL*IDRWHE
Trigger: CTCGTGCCATCTGTCGATTCAGAGGCACGCACACAT...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCGTGAGGACTGCCACATaGCCTCAACACCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCVRTAT*PQHPVS
Trigger: TGACACTGGGTGTTGAGGTCATGTGGCAGTCCTCAC...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTGCAGACGGAATACGTaGAAGGCCTACCCACGCTTG +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCCRRNT*KAYPRL
Trigger: CAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCA...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGTGCCGAGTTCAGCATaGCGATGCTTCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSVPSSA*RCFPAV
Trigger: CACTGCTGGGAAGCATCGGCATGCTGAACTCGGCAC...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGCAGCGCAGCTGAGGTaGCGAGTTCAGCATGCCGAT +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAAAQLR*RVQHAD
Trigger: ATCGGCATGCTGAACTCGGCACCTCAGCTGCGCTGC...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTGACCCCAAAGAACAATaGGTAGAACAAGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLDPKEQ*VEQGCF
Trigger: GAAACAGCCTTGTTCTACCCATTGTTCTTTGGGGTC...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TCCGGATGTCGTACAGGGCCACTGAACCATGGCGAGCTCCAACTGCTATTCTGTGGTGATGAAGGCGGGTaGTCTGGCGGTGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: SGCRTGPLNHGELQLLFCGDEGG*SGGGNE
Trigger: CTCATTGCCACCGCCAGACCACCCGCCTTCATCACC...ACAGAATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGACATCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR CCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTGGTGATGAAGGCGGGTaGTCTGGCGGTGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASGDEGG*SGGGNE
Trigger: CTCATTGCCACCGCCAGACCACCCGCCTTCATCACC...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGGGCTATTGCTCCTCTaGGCCCCCTGGCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVGLLLL*APWLCS
Trigger: AGAACAAAGCCAGGGGGCCCAGAGGAGCAATAGCCC...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACCCACGGAGTGTTCTGTaGGGTGGCCAACCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHPRSVL*GGQPLL
Trigger: CAGAAGAGGTTGGCCACCTCACAGAACACTCCGTGG...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTTTGCTTCAGGCCCTaGGGCATCAGGAGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHFCFRP*GIRSRG
Trigger: ACCACGGCTCCTGATGCCTCAGGGCCTGAAGCAAAA...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTAGCAGCATTAGACCATaGAGCGGTGCTCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSSSIRP*SGAPSR
Trigger: ACGGGAAGGAGCACCGCTTCATGGTCTAATGCTGCT...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAGAAGCATGCACAAGTaGCAAGACCCGGCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDRSMHK*QDPAVP
Trigger: TGGCACGGCCGGGTCTTGTCACTTGTGCATGCTTCT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCATGATAGACAGGAGATaGTGTGTGGTGACGGCACGG +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCMIDRR*CVVTAR
Trigger: CCGTGCCGTCACCACACAGCATCTCCTGTCTATCAT...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTAGTTCAGCATGCCGATaGTTCCCAGCAGTGACGTGT +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSSSACR*FPAVTC
Trigger: ACACGTCACTGCTGGGAAGCATCGGCATGCTGAACT...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATGTGCCGAGTTCAGCATaGCGATGCTTCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDVPSSA*RCFPAV
Trigger: CACTGCTGGGAAGCATCGGCATGCTGAACTCGGCAC...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR GCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTTTTTTGTGCTTCTGTTaGACCAAGCAACAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLFLCFC*TKQQER
Trigger: ACGCTCTTGTTGCTTGGTGCAACAGAAGCACAAAAA...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGTGTTTGCGGCAGGCTaGCTACCACTCTCACACCTC +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAVFAAG*LPLSHL
Trigger: GAGGTGTGAGAGTGGTAGGCAGCCTGCCGCAAACAC...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTATCCTGTTACGATCGTaGCCCCATCATCTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLILLRS*PHHLLK
Trigger: TTTTAACAGATGATGGGGCCACGATCGTAACAGGAT...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACAAGGTCTGGGGTGCTTaGTCTAGGTGGCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHKVWGA*SRWPGR
Trigger: CCTACCAGGCCACCTAGACCAAGCACCCCAGACCTT...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCAGGGCCACTGAACCATaGCGAGCTCCAACTGCTATT +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCRATEP*RAPTAI
Trigger: AATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCT...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGTGCTCCTTCCCGTCATaGGCCATGAGGATGACGTTG +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVCSFPS*AMRMTL
Trigger: CAACGTCATCCTCATGGCCCATGACGGGAAGGAGCA...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTTTCCCCTGCCATCTCTaGCAGGGAAAAACTACCTGG +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSFPCHL*QGKTTW
Trigger: CCAGGTAGTTTTTCCCTGCCAGAGATGGCAGGGGAA...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTGGGCTATTGCTCCTCTaGGCCCCCTGGCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASGLLLL*APWLCS
Trigger: AGAACAAAGCCAGGGGGCCCAGAGGAGCAATAGCCC...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATGGGCTATTGCTCCTCTaGGCCCCCTGGCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDGLLLL*APWLCS
Trigger: AGAACAAAGCCAGGGGGCCCAGAGGAGCAATAGCCC...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCCACATCACTGCGGAATaGATCACTAGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCHITAE*ITSWKA
Trigger: TGCCTTCCAGCTAGTGATTCATTCCGCAGTGATGTG...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGTGGCCAACCTCTTCTaGGCATGTGTTCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAVANLF*ACVPLA
Trigger: TGCAAGGGGAACACATGCTCAGAAGAGGTTGGCCAC...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGGGGTCAGAGCCAGAGTaGTCAGCATCAGACCGAGCG +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVGSEPE*SASDRA
Trigger: CGCTCGGTCTGATGCTGATCACTCTGGCTCTGACCC...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000615645.4
CDS-3UTR TCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTCAAAAGCCACTGCAGTaGTTGGTCCCTTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSQKPLQ*LVPCVH
Trigger: ATGGACACAAGGGACCAATCACTGCAGTGGCTTTTG...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGTTAATGCAGCGCAGCTaGGGTGCCGAGTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGALMQRS*GAEFSM
Trigger: CATGCTGAACTCGGCACCTCAGCTGCGCTGCATTAA...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAGCAGCATTAGACCATaGAGCGGTGCTCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDSSIRP*SGAPSR
Trigger: ACGGGAAGGAGCACCGCTTCATGGTCTAATGCTGCT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACAGCAGCATTAGACCATaGAGCGGTGCTCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHSSIRP*SGAPSR
Trigger: ACGGGAAGGAGCACCGCTTCATGGTCTAATGCTGCT...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTATGTGTGCGTGCCTCTaGATCGACAGATGGCACGAG +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASMCACL*IDRWHE
Trigger: CTCGTGCCATCTGTCGATTCAGAGGCACGCACACAT...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGGAAAAACTACCTGGTaGCAGGATGGCCACATCCTG +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVGKTTW*QDGHIL
Trigger: CAGGATGTGGCCATCCTGTCACCAGGTAGTTTTTCC...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTGTGAGGACTGCCACATaGCCTCAACACCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASVRTAT*PQHPVS
Trigger: TGACACTGGGTGTTGAGGTCATGTGGCAGTCCTCAC...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGAGTGATACTGCAAGGTaGCGGTGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLESDTAR*RCRRRR
Trigger: GCGGCGGCGGCGGCACCGGCACCTTGCAGTATCACT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
CDS-3UTR GCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAAGTGATACTGCAAGGTaGCGGTGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLSDTAR*RCRRRR
Trigger: GCGGCGGCGGCGGCACCGGCACCTTGCAGTATCACT...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
CDS-3UTR GCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTCACAGCTTCATCTCATaGCGCGATGTAGCCTATCAG +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSHSFIS*RDVAYQ
Trigger: CTGATAGGCTACATCGCGGCATGAGATGAAGCTGTG...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGATGATAGACAGGAGATaGTGTGTGGTGACGGCACGG +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRMIDRR*CVVTAR
Trigger: CCGTGCCGTCACCACACAGCATCTCCTGTCTATCAT...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTTCCAAGCATCGATCTTaGCATCTTCGGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSSKHRS*HLRASI
Trigger: GATGCTGGCCCGAAGATGGCAAGATCGATGCTTGGA...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTTCCTGCCTGCCTaGTCAATTCTTCTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCSFLPA*SILLSS
Trigger: GGAACTGAGAAGAATTGAGCAGGCAGGCAGGAAGGA...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTTCCTTCCTGCCTGCCTaGTCAATTCTTCTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSSFLPA*SILLSS
Trigger: GGAACTGAGAAGAATTGAGCAGGCAGGCAGGAAGGA...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCATGGCGAGCTCCAACTaGTATTCTGTGATTCCGCTC +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCMASSN*YSVIPL
Trigger: GAGCGGAATCACAGAATAGCAGTTGGAGCTCGCCAT...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCAGGAGCAAAAGCCACTaGAGTGATTGGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCRSKSH*SDWSLV
Trigger: CACAAGGGACCAATCACTGCAGTGGCTTTTGCTCCT...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTAGTTCAGCATGCCGATaGTTCCCAGCAGTGACGTGT +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSSSACR*FPAVTC
Trigger: ACACGTCACTGCTGGGAAGCATCGGCATGCTGAACT...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTACTATCAGACCGCCGGTaGGCGCCCCAGCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLLSDRR*APQPRR
Trigger: CCTCCTTGGCTGGGGCGCCCACCGGCGGTCTGATAG...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR CCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGCTATCAGACCGCCGGTaGGCGCCCCAGCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLELSDRR*APQPRR
Trigger: CCTCCTTGGCTGGGGCGCCCACCGGCGGTCTGATAG...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR CCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCCTGAGATGCAATGTGTaGGCGCTTTTCGACCCCAAA +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCLRCNV*ALFDPK
Trigger: TTTGGGGTCGAAAAGCGCCCACACATTGCATCTCAG...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCGAGTGTTCTGTGAGGTaGCCAACCTCTTCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCECSVR*PTSSEH
Trigger: ATGCTCAGAAGAGGTTGGCCACCTCACAGAACACTC...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGTACTCCCTCAGACGCTaGCAGCTTCCTTCCTACTTC +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVYSLRR*QLPSYF
Trigger: GAAGTAGGAAGGAAGCTGCCAGCGTCTGAGGGAGTA...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGTGCCTTAGAAAGGTCTaGGGTGCTTGGTCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRCLRKV*GAWSRW
Trigger: CCACCTAGACCAAGCACCCCAGACCTTTCTAAGGCA...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCATGCTCTTCCTCCTaGACTTTTGCTTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCSCSSS*TFASGP
Trigger: AGGGCCTGAAGCAAAAGTCCAGGAGGAAGAGCATGA...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGTCGGATAGTGCTGTGTaGAGGAAGTTTGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRSDSAV*RKFGAW
Trigger: CCAAGCCCCAAACTTCCTCCACACAGCACTATCCGA...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAAGCTTGAGGGCATTGTaGGAGCCGGGGGACGCGGGC +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLSLRAL*EPGDAG
Trigger: GCCCGCGTCCCCCGGCTCCCACAATGCCCTCAAGCT...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATTGCTCCTTCCCGTCATaGGCCATGAGGATGACGTTG +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDCSFPS*AMRMTL
Trigger: CAACGTCATCCTCATGGCCCATGACGGGAAGGAGCA...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR CCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACCCCCTGGGAACAATCTaGTGTGAGGAAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHPLGTI*CEEGQS
Trigger: GCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGG...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATCCCCTGGGAACAATCTaGTGTGAGGAAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDPLGTI*CEEGQS
Trigger: GCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGG...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR CCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAACCCGGCCGTGCCACTaGATGGCACTGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLTRPCH*MALGWA
Trigger: TGCCCACCCCAGTGCCATCCAGTGGCACGGCCGGGT...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGGCCTACCCACGCTTGTaGCCCAGGGCTATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVAYPRL*PRAIAP
Trigger: AGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGC...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCATAGCTTTCTACTaGCCTTGGTTGCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVAIAFY*PWLPVQ
Trigger: CTGCACAGGCAACCAAGGCCAGTAGAAAGCTATGGC...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGAGCCTTCCTTCTCGCTaGTTCCCAACAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGASLPSR*FPTENW
Trigger: CCAGTTCTCTGTTGGGAATCAGCGAGAAGGAAGGCT...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGCCACGGAGTGTTCTGTaGGGTGGCCAACCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVPRSVL*GGQPLL
Trigger: CAGAAGAGGTTGGCCACCTCACAGAACACTCCGTGG...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTGCTGGATGACTAAGTaGATCAACAGCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCCWMTK*INSSRN
Trigger: GTTCCTGCTGCTGTTGATTCACTTAGTCATCCAGCA...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATTTCAAACCCCAGGCGTaGAGGCAGGACATAAACAGC +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDFKPQA*RQDINS
Trigger: GCTGTTTATGTCCTGCCTTCACGCCTGGGGTTTGAA...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGCAAAAGCCACTGCAGTaGTTGGTCCCTTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRQKPLQ*LVPCVH
Trigger: ATGGACACAAGGGACCAATCACTGCAGTGGCTTTTG...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGGATGCTTCCCAGCAGTaGCGTGTTCATCTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRDASQQ*RVHLPK
Trigger: TTTTGGCAGATGAACACGTCACTGCTGGGAAGCATC...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGGGAACAATCTGGTGTaGGGAAGGACAGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVGNNLV*GRTEQH
Trigger: ATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCC...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTGGCCAAACGATACGGTaGAGTGGGGTTTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASGQTIR*SGVSAF
Trigger: GAATGCTGAAACCCCACTGCACCGTATCGTTTGGCC...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTCAATGGCTTCCTTCCTaGCTGCCTGCTCAATTCTTC +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSQWLPS*LPAQFF
Trigger: GAAGAATTGAGCAGGCAGGCAGGAAGGAAGCCATTG...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGAAACGTCAGTGCCTTaGAAGTATGTCTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAETSVP*KYVWPA
Trigger: CGCTGGCCAGACATACTTGCAAGGCACTGACGTTTC...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGATGAGCGAGAGGGCATaGCTCGCAGAGCGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEMSERA*LAERAE
Trigger: CTCGGCCCGCTCTGCGAGGCATGCCCTCTCGCTCAT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTAGTTCAGCATGCCGATaGTTCCCAGCAGTGACGTGT +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASSSACR*FPAVTC
Trigger: ACACGTCACTGCTGGGAAGCATCGGCATGCTGAACT...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGTTCAATCGTGAGGACTaGCACATGACCTCAACACCC +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRFNRED*HMTSTP
Trigger: GGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAA...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGGTGTTTGCGGCAGGCTaGCTACCACTCTCACACCTC +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVVFAAG*LPLSHL
Trigger: GAGGTGTGAGAGTGGTAGGCAGCCTGCCGCAAACAC...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGTCCACCCCAGGGTTTTaGAGCCATAGCTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVSTPGF*SHSFLL
Trigger: CAGTAGAAAGCTATGGCTGCAAAACCCTGGGGTGGA...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGCAACAGCTGTACTATaGCCGTCTGTGTGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAATAVL*PSVWQV
Trigger: TACCTGCCACACAGACGGCCATAGTACAGCTGTTGC...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTTACTCCCTCAGACGCTaGCAGCTTCCTTCCTACTTC +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASYSLRR*QLPSYF
Trigger: GAAGTAGGAAGGAAGCTGCCAGCGTCTGAGGGAGTA...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGTCATGCTCTTCCTCCTaGACTTTTGCTTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRSCSSS*TFASGP
Trigger: AGGGCCTGAAGCAAAAGTCCAGGAGGAAGAGCATGA...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTAATCCCTCAGGAATTTaGCTAGAGCTTCGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSNPSGI*LELRGL
Trigger: CAGACCTCGAAGCTCTAGCCAAATTCCTGAGGGATT...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTCCTTGCAAGTATGTCTaGCCAGCGAGTAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSPCKYV*PASSWI
Trigger: GATCCAACTACTCGCTGGCCAGACATACTTGCAAGG...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAACCCGGCCGTGCCACTaGATGGCACTGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSTRPCH*MALGWA
Trigger: TGCCCACCCCAGTGCCATCCAGTGGCACGGCCGGGT...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTGCTTTCTACTGGCCTTaGTTGCCTGTGCAGACGGAA +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASAFYWP*LPVQTE
Trigger: TTCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGC...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
3UTR CAA 72 bp ACCCCAGGGTTTTGCAGCCATAGCTTTCTACTGGCCTaGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: TPGFCSHSFLLA*VACADGIRERP
Trigger: AGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGCTATGGCTGCAAAACCCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGCCGCCGTCTCCCCAGTaGTACTGCAAGGTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVPPSPQ*YCKVPV
Trigger: CACCGGCACCTTGCAGTATCACTGGGGAGACGGCGG...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTGTGATTGATGCTGTATaGCCAAACAACAGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSVIDAV*PNNSAR
Trigger: TCGAGCACTGTTGTTTGGTCATACAGCATCAATCAC...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATCATATGGCCTCCTCTTaGCAAGAGGCCAAACGATAC +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDHMASS*QEAKRY
Trigger: GTATCGTTTGGCCTCTTGTCAAGAGGAGGCCATATG...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTAAGGCTCCCAAACAGTaGACCCACGTCCAATCAGAT +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASKAPKQ*THVQSD
Trigger: ATCTGATTGGACGTGGGTTCACTGTTTGGGAGCCTT...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGGAGGCAACCCCATTGTaGTGTTGGCAAGTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVREATPL*CWQVVS
Trigger: AGAAACAACTTGCCAACATCACAATGGGGTTGCCTC...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTGATGCTTCCCAGCAGTaGCGTGTTCATCTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASDASQQ*RVHLPK
Trigger: TTTTGGCAGATGAACACGTCACTGCTGGGAAGCATC...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTGGGAACAATCTGGTGTaGGGAAGGACAGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASGNNLV*GRTEQH
Trigger: ATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCC...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGCACAGCTTCATCTCATaGCGCGATGTAGCCTATCAG +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAHSFIS*RDVAYQ
Trigger: CTGATAGGCTACATCGCGGCATGAGATGAAGCTGTG...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACCACAGCTTCATCTCATaGCGCGATGTAGCCTATCAG +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHHSFIS*RDVAYQ
Trigger: CTGATAGGCTACATCGCGGCATGAGATGAAGCTGTG...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGAAAGTACGGCTGAGATaGAATGTGTGGGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVKVRLR*NVWALF
Trigger: GAAAAGCGCCCACACATTGCATCTCAGCCGTACTTT...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGACAGAGCAGATGCAGTaGTGTACTCTTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRTEQMQ*CTLALQ
Trigger: CTGTAGTGCAAGAGTACAGCACTGCATCTGCTCTGT...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGGCACCAGTATCCATTTaGCAGACGTACACAGAACCA +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRAPVSI*QTYTEP
Trigger: TGGTTCTGTGTACGTCTGGCAAATGGATACTGGTGC...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCACCAGTATCCATTTaGCAGACGTACACAGAACCA +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVAPVSI*QTYTEP
Trigger: TGGTTCTGTGTACGTCTGGCAAATGGATACTGGTGC...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATCAATGGCTTCCTTCCTaGCTGCCTGCTCAATTCTTC +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDQWLPS*LPAQFF
Trigger: GAAGAATTGAGCAGGCAGGCAGGAAGGAAGCCATTG...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGGACAAGACCCGGCCGTaGCACTGGATGGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVDKTRP*HWMALG
Trigger: CCCCAGTGCCATCCAGTGGCACGGCCGGGTCTTGTC...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATTTCAATCGTGAGGACTaGCACATGACCTCAACACCC +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDFNRED*HMTSTP
Trigger: GGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAA...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTTCCACCCCAGGGTTTTaGAGCCATAGCTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASSTPGF*SHSFLL
Trigger: CAGTAGAAAGCTATGGCTGCAAAACCCTGGGGTGGA...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTCCACCCCAGGGTTTTaGAGCCATAGCTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHSTPGF*SHSFLL
Trigger: CAGTAGAAAGCTATGGCTGCAAAACCCTGGGGTGGA...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATCTACTGAGTGGTCACTaGCTACAGAGCAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDLLSGH*LQSRCS
Trigger: ACTGCATCTGCTCTGTAGCCAGTGACCACTCAGTAG...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGAGCATCAGTGACATATaGCCTCCTCTTGACAAGAGG +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRSISDI*PPLDKR
Trigger: CCTCTTGTCAAGAGGAGGCCATATGTCACTGATGCT...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGCTTGCACAATATTACTaGAAGTTGGAGGGGAACCCC +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVLAQYY*KLEGNP
Trigger: GGGGTTCCCCTCCAACTTCCAGTAATATTGTGCAAG...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTAATCCCTCAGGAATTTaGCTAGAGCTTCGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSNPSGI*LELRGL
Trigger: CAGACCTCGAAGCTCTAGCCAAATTCCTGAGGGATT...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACCCTTGCAAGTATGTCTaGCCAGCGAGTAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHPCKYV*PASSWI
Trigger: GATCCAACTACTCGCTGGCCAGACATACTTGCAAGG...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGCCTTGCAAGTATGTCTaGCCAGCGAGTAGTTGGATC +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAPCKYV*PASSWI
Trigger: GATCCAACTACTCGCTGGCCAGACATACTTGCAAGG...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAGCCACTGCAGTGATTaGTCCCTTGTGTCCATGGAT +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDSHCSD*SLVSMD
Trigger: ATCCATGGACACAAGGGACCAATCACTGCAGTGGCT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACAGCCACTGCAGTGATTaGTCCCTTGTGTCCATGGAT +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHSHCSD*SLVSMD
Trigger: ATCCATGGACACAAGGGACCAATCACTGCAGTGGCT...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACCATATTTGTCCGTCGTaGCATCCTGTTACGATCGTG +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHHICPS*HPVTIV
Trigger: CACGATCGTAACAGGATGTCACGACGGACAAATATG...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCGATATAGCAAACATGTaGCTTTGTTCCGATGACCAC +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCDIANM*LCSDDH
Trigger: GTGGTCATCGGAACAAAGTCACATGTTTGCTATATC...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGATATCAGGTATCTTTaGTCATACCGAGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVDIRYL*SYRAET
Trigger: GGTCTCAGCTCGGTATGATCAAAGATACCTGATATC...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATTGCTGGATGACTAAGTaGATCAACAGCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDCWMTK*INSSRN
Trigger: GTTCCTGCTGCTGTTGATTCACTTAGTCATCCAGCA...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGAGGTTGACTGCTGGATaGCTAAGTGAATCAACAGCA +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRRLTAG*LSESTA
Trigger: TGCTGTTGATTCACTTAGTCATCCAGCAGTCAACCT...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTGGGTCAGAGCCAGAGTaGTCAGCATCAGACCGAGCG +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSGSEPE*SASDRA
Trigger: CGCTCGGTCTGATGCTGATCACTCTGGCTCTGACCC...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000615645.4
CDS-3UTR TCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGTGCATATTCTGCTGTaGTTGGGTATTTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSVHILL*LGICCK
Trigger: CTTGCAGCAAATACCCAATCACAGCAGAATATGCAC...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGTCCGCTCATAATAGCTaGCCATGTAGAACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGASAHNS*PCRTCR
Trigger: TCTGCAGGTTCTACATGGTCAGCTATTATGAGCGGA...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGTCGTACAGGGCCACTaGACCATGGCGAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLVVQGH*TMASSN
Trigger: GTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGAC...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTTGTCCATGGATTGTCTaGCATTTTCCAGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASCPWIV*HFPVRM
Trigger: CATCCGGACTGGAAAATGTCAGACAATCCATGGACA...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GACATTTTCCAGTCCGGATGTCGTACAGGGCCACTGAACCATGGCGAGCTCCAATGTCCATGGATTGTCTaGCATTTTCCAGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: DIFQSGCRTGPLNHGELQCPWIV*HFPVRM
Trigger: CATCCGGACTGGAAAATGTCAGACAATCCATGGACA...TTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGACATCCGGACTGGAAAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACGTGGCTGTCAGTGTTTaGGTAGGTGGCAAGATATCT +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHVAVSV*VGGKIS
Trigger: AGATATCTTGCCACCTACTCAAACACTGACAGCCAC...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTTACACGCTATGCTTCTaGACTTGGCTCTTTATCACA +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSYTLCF*TWLFIT
Trigger: TGTGATAAAGAGCCAAGTTCAGAAGCATAGCGTGTA...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGAAATCTAAGCTGGGATaGAGTTTGGGACTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVKSKLG*SLGLWL
Trigger: TAGCCACAGTCCCAAACTTCATCCCAGCTTAGATTT...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGAAGAGAACTGCTGTATaGCCAAACAACAGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVKRTAV*PNNSAR
Trigger: TCGAGCACTGTTGTTTGGTCATACAGCAGTTCTCTT...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615645.4
CDS-3UTR GCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGCGGAACTACGGAGGATaGGGGGTGCGTAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLERNYGG*GVRRSC
Trigger: GCAGGATCTACGCACCCCGCATCCTCCGTAGTTCCG...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR GCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTAAAGTACGGCTGAGATaGAATGTGTGGGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASKVRLR*NVWALF
Trigger: GAAAAGCGCCCACACATTGCATCTCAGCCGTACTTT...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGCGGGCCGAGTCAGCTaGTGGGCTCAGAGGCAACCC +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFAGRVS*WAQRQP
Trigger: GGGTTGCCTCTGAGCCCAGCAGCTGACTCGGCCCGC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTAGTGACGTGTTCATCTaGCAAAAAGAAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSSDVFI*QKEMWL
Trigger: CAGCCACATTTCTTTTTGGCAGATGAACACGTCACT...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGGCAGCGCAGCTGAGGTaGCGAGTTCAGCATGCCGAT +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEAAQLR*RVQHAD
Trigger: ATCGGCATGCTGAACTCGGCACCTCAGCTGCGCTGC...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR GCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTGCAGCGCAGCTGAGGTaGCGAGTTCAGCATGCCGAT +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSAAQLR*RVQHAD
Trigger: ATCGGCATGCTGAACTCGGCACCTCAGCTGCGCTGC...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCATCCTGTTACGATCGTaGCCCCATCATCTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCILLRS*PHHLLK
Trigger: TTTTAACAGATGATGGGGCCACGATCGTAACAGGAT...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACAGCATCAGTGACATATaGCCTCCTCTTGACAAGAGG +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHSISDI*PPLDKR
Trigger: CCTCTTGTCAAGAGGAGGCCATATGTCACTGATGCT...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGCTTGCACAATATTACTaGAAGTTGGAGGGGAACCCC +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGALAQYY*KLEGNP
Trigger: GGGGTTCCCCTCCAACTTCCAGTAATATTGTGCAAG...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGTCGGATAGTGCTGTGTaGAGGAAGTTTGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVSDSAV*RKFGAW
Trigger: CCAAGCCCCAAACTTCCTCCACACAGCACTATCCGA...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGAGGGCCACTGAACCATaGCGAGCTCCAACTGCTATT +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVRATEP*RAPTAI
Trigger: AATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCT...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAGGCCGTGCCACTGGATaGCACTGGGGTGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETGRATG*HWGGQA
Trigger: GGCCTGCCCACCCCAGTGCCATCCAGTGGCACGGCC...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTAATGCTGATCTGGGCTaGGAGTGCAATCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASNADLG*ECNHSV
Trigger: AACACTGTGATTGCACTCCCAGCCCAGATCAGCATT...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACGTGATTGATGCTGTATaGCCAAACAACAGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHVIDAV*PNNSAR
Trigger: TCGAGCACTGTTGTTTGGTCATACAGCATCAATCAC...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACGGAATCACACTCAGCTaGTCTATAATTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHGITLS*SIIPAG
Trigger: TCCTGCTGGAATTATAGATCAGCTGAGTGTGATTCC...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATTTCTGTTTTCCCATGTaGCAGTTTACAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDFCFPM*QFTSRL
Trigger: CAGCCTGCTTGTAAACTGTCACATGGGAAAACAGAA...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATATAAGCAACCAGTGGTaGTGTCATCGTCAACAAGGT +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDISNQW*CHRQQG
Trigger: ACCTTGTTGACGATGACATCACCACTGGTTGCTTAT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGTCTGGCGGTGGCAATaGGCGAGAGGGCATGCCTCG +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFVWRWQ*ARGHAS
Trigger: CGAGGCATGCCCTCTCGCTCATTGCCACCGCCAGAC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TCCGGATGTCGTACAGGGCCACTGAACCATGGCGAGCTCCAACTGCTATTCTGTGTGCATATTCTGCTGTaGTTGGGTATTTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SGCRTGPLNHGELQLLFCVHILL*LGICCK
Trigger: CTTGCAGCAAATACCCAATCACAGCAGAATATGCAC...ACAGAATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGACATCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR TCA 90 bp TGGTTAACGGAAGATGGTTTGGTTAGAGCAGTAGGTCAGGATCTTCACATGTGTGTCGTACAGGGCCACTaGACCATGGCGAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: WLTEDGLVRAVGQDLHMCVVQGH*TMASSN
Trigger: GTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGAC...ACACATGTGAAGATCCTGACCTACTGCTCTAACCAAACCATCTTCCGTTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR TCA 90 bp GTACATAATGATGTCCATAACCTCCACGAGAAGATCCACAACATCTGTGGGCATGTCGTACAGGGCCACTaGACCATGGCGAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: VHNDVHNLHEKIHNICGHVVQGH*TMASSN
Trigger: GTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGAC...ATGCCCACAGATGTTGTGGATCTTCTCGTGGAGGTTATGGACATCATTATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR TCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTAGAAGCATGCACAAGTaGCAAGACCCGGCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSRSMHK*QDPAVP
Trigger: TGGCACGGCCGGGTCTTGTCACTTGTGCATGCTTCT...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAAGCGGGTTCTGCCCCTaGGAAGCATGCACAAGTGAC +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLSGFCP*EACTSD
Trigger: GTCACTTGTGCATGCTTCTCAGGGGCAGAACCCGCT...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAAGTGATACTGCAAGGTaGCGGTGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETSDTAR*RCRRRR
Trigger: GCGGCGGCGGCGGCACCGGCACCTTGCAGTATCACT...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGACGGAGGATGCGGGGTaGGTAGATCCTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLETEDAG*VDPAGI
Trigger: TATCCCAGCAGGATCTACGCACCCCGCATCCTCCGT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTATGACCAAACAACAGTaGTCGAGGATTAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSMTKQQ*SRINLQ
Trigger: CTGCAAATTAATCCTCGAGCACTGTTGTTTGGTCAT...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTACTGGTAGAACTGTATaGCAGTATGTGTGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSTGRTV*QYVCKL
Trigger: TAGCTTGCACACATACTGGCATACAGTTCTACCAGT...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAACAAGTCGTCCATGTaGTGGTATGTACACACTTGC +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDNKSSM*WYVHTC
Trigger: GCAAGTGTGTACATACCAGCACATGGACGACTTGTT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGAGCGGAAACGACAGGTaGAGCAACTTGTTTAATCTG +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGASGNDR*SNLFNL
Trigger: CAGATTAAACAAGTTGCTGCACCTGTCGTTTCCGCT...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000615645.4
CDS-3UTR GCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCAAGAGTTGTTGTGTaGATATTCTGCTGTGATTGG +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVARVVV*IFCCDW
Trigger: CCAATCACAGCAGAATATGCACACAACAACTCTTGC...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGTTCCCCTTTAGCTCGTaGAAGAGTTGTTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAFPFSS*KSCCVH
Trigger: ATGCACACAACAACTCTTGCACGAGCTAAAGGGGAA...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGATGGCGAGCTCCAACTaGTATTCTGTGATTCCGCTC +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVMASSN*YSVIPL
Trigger: GAGCGGAATCACAGAATAGCAGTTGGAGCTCGCCAT...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGTTTTTGTGCTTCTGTTaGACCAAGCAACAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRFLCFC*TKQQER
Trigger: ACGCTCTTGTTGCTTGGTGCAACAGAAGCACAAAAA...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTTTTTTGTGCTTCTGTTaGACCAAGCAACAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSFLCFC*TKQQER
Trigger: ACGCTCTTGTTGCTTGGTGCAACAGAAGCACAAAAA...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACAAGTCGTCCATGTGCTaGTATGTACACACTTGCAGT +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHKSSMC*YVHTCS
Trigger: ACTGCAAGTGTGTACATACCAGCACATGGACGACTT...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGTTTCTTTCACTTGTTaGAAGAGAACTGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSVSFTC*KRTAAR
Trigger: ACGAGCAGCAGTTCTCTTCCAACAAGTGAAAGAAAC...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGATGGCTTTGATTTGCTaGACCGATATTCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRMALIC*TDIQDH
Trigger: GTGATCCTGAATATCGGTCCAGCAAATCAAAGCCAT...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTATGGCTTTGATTTGCTaGACCGATATTCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSMALIC*TDIQDH
Trigger: GTGATCCTGAATATCGGTCCAGCAAATCAAAGCCAT...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGAAGGTCTGGGGTGCTTaGTCTAGGTGGCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEKVWGA*SRWPGR
Trigger: CCTACCAGGCCACCTAGACCAAGCACCCCAGACCTT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATATTACTGGAAGTTaGAGGGGAACCCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDNITGS*RGTPCL
Trigger: AAGGCAAGGGGTTCCCCTCCAACTTCCAGTAATATT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGGTGATGAAGGCGGGTaGTCTGGCGGTGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSGDEGG*SGGGNE
Trigger: CTCATTGCCACCGCCAGACCACCCGCCTTCATCACC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGCTAAAAATGCTGATCTaGGCTGGGAGTGCAATCACA +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGALKMLI*AGSAIT
Trigger: TGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAG...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGCCTACCCACGCTTGTaGCCCAGGGCTATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSAYPRL*PRAIAP
Trigger: AGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCAATTTGCAGTTCTACTaGAAGATCCCAGAGACATAT +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCNLQFY*KIPETY
Trigger: ATATGTCTCTGGGATCTTTCAGTAGAACTGCAAATT...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTCCAGAAGAATCACCCTaGATTAACAGTTTATGGAAA +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSPEESP*INSLWK
Trigger: TTTCCATAAACTGTTAATTCAGGGTGATTCTTCTGG...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAGTCTGGCGGTGGCAATaGGCGAGAGGGCATGCCTCG +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETVWRWQ*ARGHAS
Trigger: CGAGGCATGCCCTCTCGCTCATTGCCACCGCCAGAC...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTGCTGGGAAACATTCTTaGAGACCTTTCTTTTTAACT +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSAGKHS*RPFFLT
Trigger: AGTTAAAAAGAAAGGTCTTCAAGAATGTTTCCCAGC...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGTTAATGCAGCGCAGCTaGGGTGCCGAGTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLELMQRS*GAEFSM
Trigger: CATGCTGAACTCGGCACCTCAGCTGCGCTGCATTAA...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR TCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTATTAATGCAGCGCAGCTaGGGTGCCGAGTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLLMQRS*GAEFSM
Trigger: CATGCTGAACTCGGCACCTCAGCTGCGCTGCATTAA...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR TCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTAGAACCAGCACAATCTaGCATAAGAAGAAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASRTSTI*HKKKVV
Trigger: GACCACTTTCTTCTTATGTCAGATTGTGCTGGTTCT...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTTGCATAGCAGCTAACTaGCTCCAACCTTGTTTAATC +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASCIAAN*LQPCLI
Trigger: GATTAAACAAGGTTGGAGTCAGTTAGCTGCTATGCA...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357574.7
CDS-3UTR GCA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTTATGGAAATATTCTCTaGATCCATAGAAGAACCGAG +
Preference number: 4 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSYGNIL*IHRRTE
Trigger: CTCGGTTCTTCTATGGATGCAGAGAATATTTCCATA...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTAATAGAAGTTGTCATTaGCAGCCCTTCTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASNRSCH*QPFFTS
Trigger: GGAAGTGAAGAAGGGCTGGCAATGACAACTTCTATT...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGTCAATGGCTTTGATTTaGTGGACCGATATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRSMALI*WTDIQD
Trigger: ATCCTGAATATCGGTCCAGCAAATCAAAGCCATTGA...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACATGAGCGAGAGGGCATaGCTCGCAGAGCGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SELGSLSQKSLQEISYSDMSERA*LAERAE
Trigger: CTCGGCCCGCTCTGCGAGGCATGCCCTCTCGCTCAT...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTGCAAGAGTTGTTGTGTaGATATTCTGCTGTGATTGG +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASARVVV*IFCCDW
Trigger: CCAATCACAGCAGAATATGCACACAACAACTCTTGC...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGTGCCGAGTTCAGCATaGCGATGCTTCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSVPSSA*RCFPAV
Trigger: CACTGCTGGGAAGCATCGGCATGCTGAACTCGGCAC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTACCTGCAGAGCATGTGTaGGTGCCTCTGAATCGACAG +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLPAEHV*VPLNRQ
Trigger: CTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGCCTCATTGCAATGTTTaGTCAAATAAATCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRPHCNV*SNKSRA
Trigger: GGCTCTCGATTTATTTGAGCAAACATTGCAATGAGG...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGGTGTTTGCGGCAGGCTaGCTACCACTCTCACACCTC +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVVFAAG*LPLSHL
Trigger: GAGGTGTGAGAGTGGTAGGCAGCCTGCCGCAAACAC...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTTGCTGGGATAATCCGTaGGGCGGCAAGCGCTATACA +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSCWDNP*GGKRYT
Trigger: TGTATAGCGCTTGCCGCCCCACGGATTATCCCAGCA...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGTGCTGGGATAATCCGTaGGGCGGCAAGCGCTATACA +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLECWDNP*GGKRYT
Trigger: TGTATAGCGCTTGCCGCCCCACGGATTATCCCAGCA...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR CCA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTACACCCTCCAATATTTaGAACACACAACCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSTPSNI*NTQPKV
Trigger: CACTTTTGGTTGTGTGTTCCAAATATTGGAGGGTGT...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAAAGGTCTGGGGTGCTTaGTCTAGGTGGCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSKVWGA*SRWPGR
Trigger: CCTACCAGGCCACCTAGACCAAGCACCCCAGACCTT...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATATATTCTGCTGTGATTaGGTATTTGCTGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDIFCCD*VFAARA
Trigger: GGCTCTTGCAGCAAATACCCAATCACAGCAGAATAT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGGAACCTGCAGATGGCTaGGAAACATTCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVEPADG*ETFLKT
Trigger: GGTCTTCAAGAATGTTTCCCAGCCATCTGCAGGTTC...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TGTGCTATGAAAATAAATCCCTCCCCTCCTGCTTCCACATGGAGTTCCTCAGCAAGGGCCACTGAACCATaGCGAGCTCCAACTGCTATT +
Preference number: 4 (lower is better)
Translates to: CAMKINPSPPASTWSSSARATEP*RAPTAI
Trigger: AATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCT...TGCTGAGGAACTCCATGTGGAAGCAGGAGGGGAGGGATTTATTTTCATAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR CCA 90 bp CATGGATTGTCTGACATTTTCCAGTCCGGATGTCGTACAGGGCCACTGAACCATAGCCACTGCAGTGATTaGTCCCTTGTGTCCATGGAT +
Preference number: 4 (lower is better)
Translates to: HGLSDIFQSGCRTGPLNHSHCSD*SLVSMD
Trigger: ATCCATGGACACAAGGGACCAATCACTGCAGTGGCT...ATGGTTCAGTGGCCCTGTACGACATCCGGACTGGAAAATGTCAGACAATCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR CCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTACCCCTGGGAACAATCTaGTGTGAGGAAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLPLGTI*CEEGQS
Trigger: GCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGG...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR CCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACACCCGGCCGTGCCACTaGATGGCACTGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYTRPCH*MALGWA
Trigger: TGCCCACCCCAGTGCCATCCAGTGGCACGGCCGGGT...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATACACACAACCAAAAGTaGCCTTTGTGTAAATGCACA +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDTHNQK*PLCKCT
Trigger: TGTGCATTTACACAAAGGTCACTTTTGGTTGTGTGT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACACACACAACCAAAAGTaGCCTTTGTGTAAATGCACA +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHTHNQK*PLCKCT
Trigger: TGTGCATTTACACAAAGGTCACTTTTGGTTGTGTGT...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGGGAATCACACTCAGCTaGTCTATAATTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVGITLS*SIIPAG
Trigger: TCCTGCTGGAATTATAGATCAGCTGAGTGTGATTCC...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTTTCAAACCCCAGGCGTaGAGGCAGGACATAAACAGC +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSFKPQA*RQDINS
Trigger: GCTGTTTATGTCCTGCCTTCACGCCTGGGGTTTGAA...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATGGACCCTTCTTCATATaGTCACCAATAAAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDGPFFI*SPIKVA
Trigger: TGCAACTTTTATTGGTGATCATATGAAGAAGGGTCC...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACGTCTGGCGGTGGCAATaGGCGAGAGGGCATGCCTCG +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYVWRWQ*ARGHAS
Trigger: CGAGGCATGCCCTCTCGCTCATTGCCACCGCCAGAC...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGAGCAGCATTAGACCATaGAGCGGTGCTCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVSSIRP*SGAPSR
Trigger: ACGGGAAGGAGCACCGCTTCATGGTCTAATGCTGCT...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGTGCAGACGGAATACGTaGAAGGCCTACCCACGCTTG +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVCRRNT*KAYPRL
Trigger: CAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCA...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGCTTGTAAATTACCAATaGAGCCACATATGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVLVNYQ*SHICLY
Trigger: GTAGAGACATATGTGGCTTCATTGGTAATTTACAAG...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGATGCTTCCCAGCAGTaGCGTGTTCATCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLDASQQ*RVHLSQ
Trigger: CTGTGACAGATGAACACGTCACTGCTGGGAAGCATC...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589935.1
CDS-3UTR GCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCCGGAACTACGGAGGATaGGGGGTGCGTAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFRNYGG*GVRRSC
Trigger: GCAGGATCTACGCACCCCGCATCCTCCGTAGTTCCG...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTTCAATGGCTTTGATTTaGTGGACCGATATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASSMALI*WTDIQD
Trigger: ATCCTGAATATCGGTCCAGCAAATCAAAGCCATTGA...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTGGCCAAACGATACGGTaGAGTGGGGTTTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSGQTIR*SGVSAF
Trigger: GAATGCTGAAACCCCACTGCACCGTATCGTTTGGCC...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTTCCAAGCATCGATCTTaGCATCTTCGGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSSKHRS*HLRASI
Trigger: GATGCTGGCCCGAAGATGGCAAGATCGATGCTTGGA...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATGTTGTGTGCATATTCTaGTGTGATTGGGTATTTGCT +
Preference number: 4 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDVVCIF*CDWVFA
Trigger: AGCAAATACCCAATCACAGCAGAATATGCACACAAC...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTGTTGTGTGCATATTCTaGTGTGATTGGGTATTTGCT +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASVVCIF*CDWVFA
Trigger: AGCAAATACCCAATCACAGCAGAATATGCACACAAC...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGAGTTCAGCATGCCGATaGTTCCCAGCAGTGACGTGT +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLESSACR*FPAVTC
Trigger: ACACGTCACTGCTGGGAAGCATCGGCATGCTGAACT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR GCA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCACTCCTGAACATTTGTaGCATAGTTATTACTTTTCC +
Preference number: 4 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCTPEHL*HSYYFS
Trigger: GGAAAAGTAATAACTATGGCACAAATGTTCAGGAGT...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGCCTCATTGCAATGTTTaGTCAAATAAATCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAPHCNV*SNKSRA
Trigger: GGCTCTCGATTTATTTGAGCAAACATTGCAATGAGG...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTTACTCCCTCAGACGCTaGCAGCTTCCTTCCTACTTC +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSYSLRR*QLPSYF
Trigger: GAAGTAGGAAGGAAGCTGCCAGCGTCTGAGGGAGTA...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGGTGATGAAGGCGGGTaGTCTGGCGGTGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFGDEGG*SGGGNE
Trigger: CTCATTGCCACCGCCAGACCACCCGCCTTCATCACC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCATGCTCCTTCCCGTCATaGGCCATGAGGATGACGTTG +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSCSFPS*AMRMTL
Trigger: CAACGTCATCCTCATGGCCCATGACGGGAAGGAGCA...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCACCCCTGGGAACAATCTaGTGTGAGGAAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSPLGTI*CEEGQS
Trigger: GCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGG...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGCTTTCTACTGGCCTTaGTTGCCTGTGCAGACGGAA +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLAFYWP*LPVQTE
Trigger: TTCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGC...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGGCCATAGCTTTCTACTaGCCTTGGTTGCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEAIAFY*PWLPVQ
Trigger: CTGCACAGGCAACCAAGGCCAGTAGAAAGCTATGGC...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTATTAAAGGTGTACGCTaGGATGACAATGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASIKGVR*DDNAEF
Trigger: AAACTCTGCATTGTCATCCCAGCGTACACCTTTAAT...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTATATGTCCCAAATTATaGCTGAAAAATCCACACCTC +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASICPKL*LKNPHL
Trigger: GAGGTGTGGATTTTTCAGTCATAATTTGGGACATAT...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGCATATGGCCTCCTCTTaGCAAGAGGCCAAACGATAC +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEHMASS*QEAKRY
Trigger: GTATCGTTTGGCCTCTTGTCAAGAGGAGGCCATATG...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCTTTTGCTTCAGGCCCTaGGGCATCAGGAGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFFCFRP*GIRSRG
Trigger: ACCACGGCTCCTGATGCCTCAGGGCCTGAAGCAAAA...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACGCTGGGAAACATTCTTaGAGACCTTTCTTTTTAACT +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHAGKHS*RPFFLT
Trigger: AGTTAAAAAGAAAGGTCTTCAAGAATGTTTCCCAGC...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGGGAACAATCTGGTGTaGGGAAGGACAGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLGNNLV*GRTEQH
Trigger: ATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCC...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGGGAAAAACTACCTGGTaGCAGGATGGCCACATCCTG +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVGKTTW*QDGHIL
Trigger: CAGGATGTGGCCATCCTGTCACCAGGTAGTTTTTCC...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGAGGTGTACGCTGGGATaGCAATGCAGAGTTTACCTC +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLERCTLG*QCRVYL
Trigger: GAGGTAAACTCTGCATTGTCATCCCAGCGTACACCT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACCTTGTAAATTACCAATaGAGCCACATATGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHLVNYQ*SHICLY
Trigger: GTAGAGACATATGTGGCTTCATTGGTAATTTACAAG...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGCACAGCTTCATCTCATaGCGCGATGTAGCCTATCAG +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEHSFIS*RDVAYQ
Trigger: CTGATAGGCTACATCGCGGCATGAGATGAAGCTGTG...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR GCA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTCTCTCCACTTTCAGATaGACTCACAATATACTGTTT +
Preference number: 4 (lower is better)
Translates to: KLPGDRMATSCRACVRASLSTFR*THNILF
Trigger: AAACAGTATATTGTGAGTGCATCTGAAAGTGGAGAG...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCATCCAGACCTTCAGGATaGCAGTCACCGAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSSRPSG*QSPRVL
Trigger: TAGCACTCTCGGTGACTGGCATCCTGAAGGTCTGGA...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTATGGCTACAGAGCAGATaGAGTGCTGTACTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLWLQSR*SAVLLH
Trigger: GTGCAAGAGTACAGCACTGCATCTGCTCTGTAGCCA...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGGGCCAAACGATACGGTaGAGTGGGGTTTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVGQTIR*SGVSAF
Trigger: GAATGCTGAAACCCCACTGCACCGTATCGTTTGGCC...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTTCCTTCCTGCCTGCCTaGTCAATTCTTCTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSSFLPA*SILLSS
Trigger: GGAACTGAGAAGAATTGAGCAGGCAGGCAGGAAGGA...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CATGGATTGTCTGACATTTTCCAGTCCGGATGTCGTACAGGGCCACTGAACCATTTCCCCTTTAGCTCGTaGAAGAGTTGTTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: HGLSDIFQSGCRTGPLNHFPFSS*KSCCVH
Trigger: ATGCACACAACAACTCTTGCACGAGCTAAAGGGGAA...ATGGTTCAGTGGCCCTGTACGACATCCGGACTGGAAAATGTCAGACAATCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR GCA 90 bp TCCACCCTTTCTAGACATTTCAGGCTTTTACATGGCAGGACTTCAGCAGACACAATGGCGAGCTCCAACTaGTATTCTGTGATTCCGCTC +
Preference number: 4 (lower is better)
Translates to: STLSRHFRLLHGRTSADTMASSN*YSVIPL
Trigger: GAGCGGAATCACAGAATAGCAGTTGGAGCTCGCCAT...TGTGTCTGCTGAAGTCCTGCCATGTAAAAGCCTGAAATGTCTAGAAAGGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR GCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAGGATGGCCACATCCTaGAGAGCATGTGTGCGTGCC +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFRMATS*RACVRA
Trigger: GGCACGCACACATGCTCTGCAGGATGTGGCCATCCT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCATCTACTGGCCTTGGTTaGCTGTGCAGACGGAATACG +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSSTGLG*LCRRNT
Trigger: CGTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGA...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCTAGACATTTCAGGCTTTTACATGGCAGGACTTCAGCAGACACATGTACACACAAATCCCTCCCCTCCTaGTTCCACATGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SRHFRLLHGRTSADTCTHKSLPS*FHMEFL
Trigger: GAGGAACTCCATGTGGAAGCAGGAGGGGAGGGATTT...GTGTGTACATGTGTCTGCTGAAGTCCTGCCATGTAAAAGCCTGAAATGTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR CCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTACTGAGATGCAATGTGTaGGCGCTTTTCGACCCCAAA +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLLRCNV*ALFDPK
Trigger: TTTGGGGTCGAAAAGCGCCCACACATTGCATCTCAG...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGTCCTCTTGTGTTCGGTaGGATCGAATAATACTCATG +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVSSCVR*DRIILM
Trigger: CATGAGTATTATTCGATCCCACCGAACACAAGAGGA...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGGCAACAGCTGTACTATaGCCGTCTGTGTGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVATAVL*PSVWQV
Trigger: TACCTGCCACACAGACGGCCATAGTACAGCTGTTGC...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTCTACTGAGTGGTCACTaGCTACAGAGCAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSLLSGH*LQSRCS
Trigger: ACTGCATCTGCTCTGTAGCCAGTGACCACTCAGTAG...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCATGCCTTAGAAAGGTCTaGGGTGCTTGGTCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSCLRKV*GAWSRW
Trigger: CCACCTAGACCAAGCACCCCAGACCTTTCTAAGGCA...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AATGATGTCCATAACCTCCACGAGAAGATCCACAACATCTGTGGGCATCTTTTCAGGGCCACTGAACCATaGCGAGCTCCAACTGCTATT +
Preference number: 4 (lower is better)
Translates to: NDVHNLHEKIHNICGHLFRATEP*RAPTAI
Trigger: AATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCT...GAAAAGATGCCCACAGATGTTGTGGATCTTCTCGTGGAGGTTATGGACATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR TCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGATTTTCACTAGGACCTaGACACAACAAGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVIFTRT*TQQGIV
Trigger: GACTATTCCTTGTTGTGTTCAGGTCCTAGTGAAAAT...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGCATATGGCCTCCTCTTaGCAAGAGGCCAAACGATAC +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVHMASS*QEAKRY
Trigger: GTATCGTTTGGCCTCTTGTCAAGAGGAGGCCATATG...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACATTTTGCTTCAGGCCCTaGGGCATCAGGAGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETFCFRP*GIRSRG
Trigger: ACCACGGCTCCTGATGCCTCAGGGCCTGAAGCAAAA...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AATGATGTCCATAACCTCCACGAGAAGATCCACAACATCTGTGGGCATCTTTTCCAAAAGCCACTGCAGTaGTTGGTCCCTTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: NDVHNLHEKIHNICGHLFQKPLQ*LVPCVH
Trigger: ATGGACACAAGGGACCAATCACTGCAGTGGCTTTTG...GAAAAGATGCCCACAGATGTTGTGGATCTTCTCGTGGAGGTTATGGACATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGGATGCTTCCCAGCAGTaGCGTGTTCATCTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVDASQQ*RVHLPK
Trigger: TTTTGGCAGATGAACACGTCACTGCTGGGAAGCATC...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCTTAATGCAGCGCAGCTaGGGTGCCGAGTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFLMQRS*GAEFSM
Trigger: CATGCTGAACTCGGCACCTCAGCTGCGCTGCATTAA...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACAGAAGCATGCACAAGTaGCAAGACCCGGCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SELGSLSQKSLQEISYSDRSMHK*QDPAVP
Trigger: TGGCACGGCCGGGTCTTGTCACTTGTGCATGCTTCT...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGAGGTGTACGCTGGGATaGCAATGCAGAGTTTACCTC +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVRCTLG*QCRVYL
Trigger: GAGGTAAACTCTGCATTGTCATCCCAGCGTACACCT...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAACGGAGGATGCGGGGTaGGTAGATCCTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETTEDAG*VDPAGI
Trigger: TATCCCAGCAGGATCTACGCACCCCGCATCCTCCGT...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGGCTCGAGGATTAATTTaGAGTTCTACTGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVARGLI*SSTERS
Trigger: GGATCTTTCAGTAGAACTGCAAATTAATCCTCGAGC...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GTACATAATGATGTCCATAACCTCCACGAGAAGATCCACAACATCTGTGGGCATATGGCGAGCTCCAACTaGTATTCTGTGATTCCGCTC +
Preference number: 4 (lower is better)
Translates to: VHNDVHNLHEKIHNICGHMASSN*YSVIPL
Trigger: GAGCGGAATCACAGAATAGCAGTTGGAGCTCGCCAT...ATGCCCACAGATGTTGTGGATCTTCTCGTGGAGGTTATGGACATCATTATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR GCA 90 bp GTACATAATGATGTCCATAACCTCCACGAGAAGATCCACAACATCTGTGGGCATAGGAGCAAAAGCCACTaGAGTGATTGGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: VHNDVHNLHEKIHNICGHRSKSH*SDWSLV
Trigger: CACAAGGGACCAATCACTGCAGTGGCTTTTGCTCCT...ATGCCCACAGATGTTGTGGATCTTCTCGTGGAGGTTATGGACATCATTATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR GCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAAGGATGGCCACATCCTaGAGAGCATGTGTGCGTGCC +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETRMATS*RACVRA
Trigger: GGCACGCACACATGCTCTGCAGGATGTGGCCATCCT...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTATGGGAACTACAGGATTaGAAGTTTTCCGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLWELQD*KFSGGK
Trigger: CTTTCCCCCGGAAAACTTGCAATCCTGTAGTTCCCA...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGTGGGAACTACAGGATTaGAAGTTTTCCGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEWELQD*KFSGGK
Trigger: CTTTCCCCCGGAAAACTTGCAATCCTGTAGTTCCCA...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGAGACAAACAAGTGATTaGTGCTGTATGACCAAACAA +
Preference number: 4 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVRQTSD*CCMTKQ
Trigger: TTGTTTGGTCATACAGCATCAATCACTTGTTTGTCT...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAGCCTTCCTTCTCGCTaGTTCCCAACAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFSLPSR*FPTENW
Trigger: CCAGTTCTCTGTTGGGAATCAGCGAGAAGGAAGGCT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAGTGGCCAACCTCTTCTaGGCATGTGTTCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETVANLF*ACVPLA
Trigger: TGCAAGGGGAACACATGCTCAGAAGAGGTTGGCCAC...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGTTCTGTTTTCCCATGTaGCAGTTTACAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEFCFPM*QFTSRL
Trigger: CAGCCTGCTTGTAAACTGTCACATGGGAAAACAGAA...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGATAAGCAACCAGTGGTaGTGTCATCGTCAACAAGGT +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEISNQW*CHRQQG
Trigger: ACCTTGTTGACGATGACATCACCACTGGTTGCTTAT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGGTGCATATTCTGCTGTaGTTGGGTATTTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEVHILL*LGICCK
Trigger: CTTGCAGCAAATACCCAATCACAGCAGAATATGCAC...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AATGATGTCCATAACCTCCACGAGAAGATCCACAACATCTGTGGGCATCTTTTCTCCGCTCATAATAGCTaGCCATGTAGAACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NDVHNLHEKIHNICGHLFSAHNS*PCRTCR
Trigger: TCTGCAGGTTCTACATGGTCAGCTATTATGAGCGGA...GAAAAGATGCCCACAGATGTTGTGGATCTTCTCGTGGAGGTTATGGACATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGTGTCCATGGATTGTCTaGCATTTTCCAGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVCPWIV*HFPVRM
Trigger: CATCCGGACTGGAAAATGTCAGACAATCCATGGACA...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCATGTCCATGGATTGTCTaGCATTTTCCAGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSCPWIV*HFPVRM
Trigger: CATCCGGACTGGAAAATGTCAGACAATCCATGGACA...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGTGGCTGTCAGTGTTTaGGTAGGTGGCAAGATATCT +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSVAVSV*VGGKIS
Trigger: AGATATCTTGCCACCTACTCAAACACTGACAGCCAC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGCGGGTTCTGCCCCTaGGAAGCATGCACAAGTGAC +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYSGFCP*EACTSD
Trigger: GTCACTTGTGCATGCTTCTCAGGGGCAGAACCCGCT...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAGTGAGGACTGCCACATaGCCTCAACACCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETVRTAT*PQHPVS
Trigger: TGACACTGGGTGTTGAGGTCATGTGGCAGTCCTCAC...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGAAATCTAAGCTGGGATaGAGTTTGGGACTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEKSKLG*SLGLWL
Trigger: TAGCCACAGTCCCAAACTTCATCCCAGCTTAGATTT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TCCACCCTTTCTAGACATTTCAGGCTTTTACATGGCAGGACTTCAGCAGACACAAGTAAATGTCCGTCATaGTGGGACTTGGCATTTTCG +
Preference number: 4 (lower is better)
Translates to: STLSRHFRLLHGRTSADTSKCPS*WDLAFS
Trigger: CGAAAATGCCAAGTCCCATCATGACGGACATTTACT...TGTGTCTGCTGAAGTCCTGCCATGTAAAAGCCTGAAATGTCTAGAAAGGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR GCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAGCCAGTCACCGAGAGTaGTACCACTGTGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETASHRE*YHCVLL
Trigger: CAAGAGGACACAGTGGTAGCACTCTCGGTGACTGGC...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGAACAAGTCGTCCATGTaGTGGTATGTACACACTTGC +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLENKSSM*WYVHTC
Trigger: GCAAGTGTGTACATACCAGCACATGGACGACTTGTT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGCAGTGCTGTACTCTTaGACTACAGTTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSAVLYS*TTVFRW
Trigger: CCACCTGAAAACTGTAGTGCAAGAGTACAGCACTGC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGACAGAGCAGATGCAGTaGTGTACTCTTGCACTACAG +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVTEQMQ*CTLALQ
Trigger: CTGTAGTGCAAGAGTACAGCACTGCATCTGCTCTGT...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGATTTCCCTTGTCAGATaGCTCAGAAGCCAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEISLVR*LRSQEV
Trigger: AACCTCTTGGCTTCTGAGGCATCTGACAAGGGAAAT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTAGCGGAAACGACAGGTaGAGCAACTTGTTTAATCTG +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSSGNDR*SNLFNL
Trigger: CAGATTAAACAAGTTGCTGCACCTGTCGTTTCCGCT...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000615645.4
CDS-3UTR GCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGAAACGTCAGTGCCTTaGAAGTATGTCTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFETSVP*KYVWPA
Trigger: CGCTGGCCAGACATACTTGCAAGGCACTGACGTTTC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTATTCCCCTTTAGCTCGTaGAAGAGTTGTTGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLFPFSS*KSCCVH
Trigger: ATGCACACAACAACTCTTGCACGAGCTAAAGGGGAA...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAGCAGCGCAGCTGAGGTaGCGAGTTCAGCATGCCGAT +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQAAQLR*RVQHAD
Trigger: ATCGGCATGCTGAACTCGGCACCTCAGCTGCGCTGC...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACACCTGCAGAGCATGTGTaGGTGCCTCTGAATCGACAG +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETPAEHV*VPLNRQ
Trigger: CTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGGATGGCCACATCCTaGAGAGCATGTGTGCGTGCC +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYRMATS*RACVRA
Trigger: GGCACGCACACATGCTCTGCAGGATGTGGCCATCCT...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACATGCTGGGATAATCCGTaGGGCGGCAAGCGCTATACA +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETCWDNP*GGKRYT
Trigger: TGTATAGCGCTTGCCGCCCCACGGATTATCCCAGCA...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGAAGTCGTCCATGTGCTaGTATGTACACACTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEKSSMC*YVHTCS
Trigger: ACTGCAAGTGTGTACATACCAGCACATGGACGACTT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAAATATTACTGGAAGTTaGAGGGGAACCCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLNITGS*RGTPCL
Trigger: AAGGCAAGGGGTTCCCCTCCAACTTCCAGTAATATT...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGAACCTGCAGATGGCTaGGAAACATTCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSEPADG*ETFLKT
Trigger: GGTCTTCAAGAATGTTTCCCAGCCATCTGCAGGTTC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAGGGCCACTGAACCATaGCGAGCTCCAACTGCTATT +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFRATEP*RAPTAI
Trigger: AATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTACTAAAAATGCTGATCTaGGCTGGGAGTGCAATCACA +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLLKMLI*AGSAIT
Trigger: TGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAG...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAGCCTACCCACGCTTGTaGCCCAGGGCTATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQAYPRL*PRAIAP
Trigger: AGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGC...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGCTTTCTACTGGCCTTaGTTGCCTGTGCAGACGGAA +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFAFYWP*LPVQTE
Trigger: TTCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCCACATCACTGCGGAATaGATCACTAGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFHITAE*ITSWKA
Trigger: TGCCTTCCAGCTAGTGATTCATTCCGCAGTGATGTG...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGGATATAGCAAACATGTaGCTTTGTTCCGATGACCAC +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEDIANM*LCSDDH
Trigger: GTGGTCATCGGAACAAAGTCACATGTTTGCTATATC...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGATATCAGGTATCTTTaGTCATACCGAGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSDIRYL*SYRAET
Trigger: GGTCTCAGCTCGGTATGATCAAAGATACCTGATATC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTTCTTCAGTCAGGAGTTaGATAATCAACGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSSSVRS*IINAST
Trigger: TGTGGAAGCGTTGATTATTCAACTCCTGACTGAAGA...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAAGGCTCCCAAACAGTaGACCCACGTCCAATCAGAT +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFKAPKQ*THVQSD
Trigger: ATCTGATTGGACGTGGGTTCACTGTTTGGGAGCCTT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTTACACGCTATGCTTCTaGACTTGGCTCTTTATCACA +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSYTLCF*TWLFIT
Trigger: TGTGATAAAGAGCCAAGTTCAGAAGCATAGCGTGTA...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGAGAACCAGCACAATCTaGCATAAGAAGAAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLERTSTI*HKKKVV
Trigger: GACCACTTTCTTCTTATGTCAGATTGTGCTGGTTCT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TGTGCTATGAAAATAAATCCCTCCCCTCCTGCTTCCACATGGAGTTCCTCAGCACATTTTCGTGGGTTTTaGTTTGGGTTATGGTTAACG +
Preference number: 4 (lower is better)
Translates to: CAMKINPSPPASTWSSSAHFRGF*FGLWLT
Trigger: CGTTAACCATAACCCAAATCAAAACCCACGAAAATG...TGCTGAGGAACTCCATGTGGAAGCAGGAGGGGAGGGATTTATTTTCATAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR TCA 90 bp TGGTTAACGGAAGATGGTTTGGTTAGAGCAGTAGGTCAGGATCTTCACATGTGTAGTTCCTCAGCAGCATaGATGGTCTTGATTATCTCC +
Preference number: 4 (lower is better)
Translates to: WLTEDGLVRAVGQDLHMCSSSAA*MVLIIS
Trigger: GGAGATAATCAAGACCATTCATGCTGCTGAGGAACT...ACACATGTGAAGATCCTGACCTACTGCTCTAACCAAACCATCTTCCGTTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR GCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAACGGAGGATGCGGGGTaGGTAGATCCTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQTEDAG*VDPAGI
Trigger: TATCCCAGCAGGATCTACGCACCCCGCATCCTCCGT...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACGCCAGTCACCGAGAGTaGTACCACTGTGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYASHRE*YHCVLL
Trigger: CAAGAGGACACAGTGGTAGCACTCTCGGTGACTGGC...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACATCCAGACCTTCAGGATaGCAGTCACCGAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETSRPSG*QSPRVL
Trigger: TAGCACTCTCGGTGACTGGCATCCTGAAGGTCTGGA...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAGCATGTGTTCCCCTTaGAACAGCTGTACTATGGCC +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFSMCSP*NSCTMA
Trigger: GGCCATAGTACAGCTGTTGCAAGGGGAACACATGCT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAATGATAGACAGGAGATaGTGTGTGGTGACGGCACGG +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETMIDRR*CVVTAR
Trigger: CCGTGCCGTCACCACACAGCATCTCCTGTCTATCAT...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGAGTGACGTGTTCATCTaGCAAAAAGAAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLESDVFI*QKEMWL
Trigger: CAGCCACATTTCTTTTTGGCAGATGAACACGTCACT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCCAACTGCTATTCTGTGATTCCGCTCATAATAGCTGACCATGTAGAACCTGCAGAGTTTTCATATGCCTaGTCTTTGGCTATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SNCYSVIPLIIADHVEPAEFSYA*SLAMVV
Trigger: CACCACCATAGCCAAAGAGCAGGCATATGAAAACTC...TGCAGGTTCTACATGGTCAGCTATTATGAGCGGAATCACAGAATAGCAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCCTGAGATGCAATGTGTaGGCGCTTTTCGACCCCAAA +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFLRCNV*ALFDPK
Trigger: TTTGGGGTCGAAAAGCGCCCACACATTGCATCTCAG...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGTCCTCTTGTGTTCGGTaGGATCGAATAATACTCATG +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLESSCVR*DRIILM
Trigger: CATGAGTATTATTCGATCCCACCGAACACAAGAGGA...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGAGTGTTCTGTGAGGTaGCCAACCTCTTCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFECSVR*PTSSEH
Trigger: ATGCTCAGAAGAGGTTGGCCACCTCACAGAACACTC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACATGCCTTAGAAAGGTCTaGGGTGCTTGGTCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETCLRKV*GAWSRW
Trigger: CCACCTAGACCAAGCACCCCAGACCTTTCTAAGGCA...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGAATATTACTGGAAGTTaGAGGGGAACCCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVNITGS*RGTPCL
Trigger: AAGGCAAGGGGTTCCCCTCCAACTTCCAGTAATATT...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACATCGGATAGTGCTGTGTaGAGGAAGTTTGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETSDSAV*RKFGAW
Trigger: CCAAGCCCCAAACTTCCTCCACACAGCACTATCCGA...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTACATATGCCACACATATaGGAACTACAGGATTGCAAG +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLHMPHI*ELQDCK
Trigger: CTTGCAATCCTGTAGTTCCCATATGTGTGGCATATG...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACGCCATAGCTTTCTACTaGCCTTGGTTGCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SELGSLSQKSLQEISYSDAIAFY*PWLPVQ
Trigger: CTGCACAGGCAACCAAGGCCAGTAGAAAGCTATGGC...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGTGCATAGCAGCTAACTaGCTCCAACCTTCATTTACT +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVCIAAN*LQPSFT
Trigger: AGTAAATGAAGGTTGGAGTCAGTTAGCTGCTATGCA...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000615645.4
CDS-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGAGGCAACCCCATTGTaGTGTTGGCAAGTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFEATPL*CWQVVS
Trigger: AGAAACAACTTGCCAACATCACAATGGGGTTGCCTC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCTCCGCTCATAATAGCTaGCCATGTAGAACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFSAHNS*PCRTCR
Trigger: TCTGCAGGTTCTACATGGTCAGCTATTATGAGCGGA...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACACAAAAGCCACTGCAGTaGTTGGTCCCTTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETQKPLQ*LVPCVH
Trigger: ATGGACACAAGGGACCAATCACTGCAGTGGCTTTTG...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAATGCAGACGGAATACGTaGAAGGCCTACCCACGCTTG +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQCRRNT*KAYPRL
Trigger: CAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCA...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTATGACCAAACAACAGTaGTCGAGGATTAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSMTKQQ*SRINLQ
Trigger: CTGCAAATTAATCCTCGAGCACTGTTGTTTGGTCAT...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAACTGGTAGAACTGTATaGCAGTATGTGTGCAAGCTA +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSTGRTV*QYVCKL
Trigger: TAGCTTGCACACATACTGGCATACAGTTCTACCAGT...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp AATGATGTCCATAACCTCCACGAGAAGATCCACAACATCTGTGGGCATCTTTTCGCAAGAGTTGTTGTGTaGATATTCTGCTGTGATTGG +
Preference number: 4 (lower is better)
Translates to: NDVHNLHEKIHNICGHLFARVVV*IFCCDW
Trigger: CCAATCACAGCAGAATATGCACACAACAACTCTTGC...GAAAAGATGCCCACAGATGTTGTGGATCTTCTCGTGGAGGTTATGGACATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR GCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACATGGCGAGCTCCAACTaGTATTCTGTGATTCCGCTC +
Preference number: 4 (lower is better)
Translates to: SELGSLSQKSLQEISYSDMASSN*YSVIPL
Trigger: GAGCGGAATCACAGAATAGCAGTTGGAGCTCGCCAT...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACAGGAGCAAAAGCCACTaGAGTGATTGGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SELGSLSQKSLQEISYSDRSKSH*SDWSLV
Trigger: CACAAGGGACCAATCACTGCAGTGGCTTTTGCTCCT...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACTCTACTGGCCTTGGTTaGCTGTGCAGACGGAATACG +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYSTGLG*LCRRNT
Trigger: CGTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGA...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGGTTCATTACTATTaGGAATCACACTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLEVHYY*ESHSAD
Trigger: ATCAGCTGAGTGTGATTCCCAATAGTAATGAACCTC...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGATGGCTTTGATTTGCTaGACCGATATTCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVMALIC*TDIQDH
Trigger: GTGATCCTGAATATCGGTCCAGCAAATCAAAGCCAT...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAAACGATACGGTGCAGTaGGGTTTCAGCATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETNDTVQ*GFSIPR
Trigger: CCTTGGAATGCTGAAACCCCACTGCACCGTATCGTT...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAGCATCAGTGACATATaGCCTCCTCTTGACAAGAGG +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFSISDI*PPLDKR
Trigger: CCTCTTGTCAAGAGGAGGCCATATGTCACTGATGCT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAATCCCTCAGGAATTTaGCTAGAGCTTCGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFNPSGI*LELRGL
Trigger: CAGACCTCGAAGCTCTAGCCAAATTCCTGAGGGATT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGATATTCTGCTGTGATTaGGTATTTGCTGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVIFCCD*VFAARA
Trigger: GGCTCTTGCAGCAAATACCCAATCACAGCAGAATAT...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GTACATAATGATGTCCATAACCTCCACGAGAAGATCCACAACATCTGTGGGCATATATTCTGCTGTGATTaGGTATTTGCTGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: VHNDVHNLHEKIHNICGHIFCCD*VFAARA
Trigger: GGCTCTTGCAGCAAATACCCAATCACAGCAGAATAT...ATGCCCACAGATGTTGTGGATCTTCTCGTGGAGGTTATGGACATCATTATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGAACCTGCAGATGGCTaGGAAACATTCTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFEPADG*ETFLKT
Trigger: GGTCTTCAAGAATGTTTCCCAGCCATCTGCAGGTTC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAAGCCACTGCAGTGATTaGTCCCTTGTGTCCATGGAT +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETSHCSD*SLVSMD
Trigger: ATCCATGGACACAAGGGACCAATCACTGCAGTGGCT...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAATGCTGATCTGGGCTaGGAGTGCAATCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFNADLG*ECNHSV
Trigger: AACACTGTGATTGCACTCCCAGCCCAGATCAGCATT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCACATATGCCACACATATaGGAACTACAGGATTGCAAG +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSHMPHI*ELQDCK
Trigger: CTTGCAATCCTGTAGTTCCCATATGTGTGGCATATG...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAAATTTGCAGTTCTACTaGAAGATCCCAGAGACATAT +
Preference number: 4 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLNLQFY*KIPETY
Trigger: ATATGTCTCTGGGATCTTTCAGTAGAACTGCAAATT...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAATTCAAACCCCAGGCGTaGAGGCAGGACATAAACAGC +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQFKPQA*RQDINS
Trigger: GCTGTTTATGTCCTGCCTTCACGCCTGGGGTTTGAA...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGGACCCTTCTTCATATaGTCACCAATAAAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSGPFFI*SPIKVA
Trigger: TGCAACTTTTATTGGTGATCATATGAAGAAGGGTCC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACGTGGCTGTCAGTGTTTaGGTAGGTGGCAAGATATCT +
Preference number: 4 (lower is better)
Translates to: SELGSLSQKSLQEISYSDVAVSV*VGGKIS
Trigger: AGATATCTTGCCACCTACTCAAACACTGACAGCCAC...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAAATCTAAGCTGGGATaGAGTTTGGGACTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFKSKLG*SLGLWL
Trigger: TAGCCACAGTCCCAAACTTCATCCCAGCTTAGATTT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGCTTGTAAATTACCAATaGAGCCACATATGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLELVNYQ*SHICLY
Trigger: GTAGAGACATATGTGGCTTCATTGGTAATTTACAAG...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp ATTATCTCCACCCTTTCTAGACATTTCAGGCTTTTACATGGCAGGACTTCAGCACAGCATGAATGGTCTTaGTTATCTCCACCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: IISTLSRHFRLLHGRTSAQHEWS*LSPPFL
Trigger: TAGAAAGGGTGGAGATAATCAAGACCATTCATGCTG...TGCTGAAGTCCTGCCATGTAAAAGCCTGAAATGTCTAGAAAGGGTGGAGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR GCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACAAAGTACGGCTGAGATaGAATGTGTGGGCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SELGSLSQKSLQEISYSDKVRLR*NVWALF
Trigger: GAAAAGCGCCCACACATTGCATCTCAGCCGTACTTT...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCATTTCCCTTGTCAGATaGCTCAGAAGCCAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFISLVR*LRSQEV
Trigger: AACCTCTTGGCTTCTGAGGCATCTGACAAGGGAAAT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCATCAATGGCTTTGATTTaGTGGACCGATATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSSMALI*WTDIQD
Trigger: ATCCTGAATATCGGTCCAGCAAATCAAAGCCATTGA...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAATCCAAGCATCGATCTTaGCATCTTCGGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQSKHRS*HLRASI
Trigger: GATGCTGGCCCGAAGATGGCAAGATCGATGCTTGGA...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACCAATGGCTTCCTTCCTaGCTGCCTGCTCAATTCTTC +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYQWLPS*LPAQFF
Trigger: GAAGAATTGAGCAGGCAGGCAGGAAGGAAGCCATTG...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGTTGTGTGCATATTCTaGTGTGATTGGGTATTTGCT +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSVVCIF*CDWVFA
Trigger: AGCAAATACCCAATCACAGCAGAATATGCACACAAC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AATGATGTCCATAACCTCCACGAGAAGATCCACAACATCTGTGGGCATCTTTTCGTTGTGTGCATATTCTaGTGTGATTGGGTATTTGCT +
Preference number: 4 (lower is better)
Translates to: NDVHNLHEKIHNICGHLFVVCIF*CDWVFA
Trigger: AGCAAATACCCAATCACAGCAGAATATGCACACAAC...GAAAAGATGCCCACAGATGTTGTGGATCTTCTCGTGGAGGTTATGGACATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR GCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGGAGCAAAAGCCACTaGAGTGATTGGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYRSKSH*SDWSLV
Trigger: CACAAGGGACCAATCACTGCAGTGGCTTTTGCTCCT...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGACCCCAAAGAACAATaGGTAGAACAAGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFDPKEQ*VEQGCF
Trigger: GAAACAGCCTTGTTCTACCCATTGTTCTTTGGGGTC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAACGATACGGTGCAGTaGGGTTTCAGCATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYNDTVQ*GFSIPR
Trigger: CCTTGGAATGCTGAAACCCCACTGCACCGTATCGTT...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAATTCCCCTGCCATCTCTaGCAGGGAAAAACTACCTGG +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQFPCHL*QGKTTW
Trigger: CCAGGTAGTTTTTCCCTGCCAGAGATGGCAGGGGAA...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TGGTTAACGGAAGATGGTTTGGTTAGAGCAGTAGGTCAGGATCTTCACATGTGTTCGTGGGTTTTGATTTaGGTTATGGTTAACGGAAGA +
Preference number: 4 (lower is better)
Translates to: WLTEDGLVRAVGQDLHMCSWVLI*VMVNGR
Trigger: TCTTCCGTTAACCATAACCCAAATCAAAACCCACGA...ACACATGTGAAGATCCTGACCTACTGCTCTAACCAAACCATCTTCCGTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR CCA 90 bp TTTACATGGCAGGACTTCAGCAGACACATGTACACACTAACTCACTGGACAGCATGTTTTCTTCAGATCTaGGCAAACCCAAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: FTWQDFSRHMYTLTHWTACFLQI*ANPKLN
Trigger: ATTTAGCTTTGGGTTTGCCCAGATCTGAAGAAAACA...TGCTGTCCAGTGAGTTAGTGTGTACATGTGTCTGCTGAAGTCCTGCCATGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR TCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAAAGGCTCCCAAACAGTaGACCCACGTCCAATCAGAT +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQKAPKQ*THVQSD
Trigger: ATCTGATTGGACGTGGGTTCACTGTTTGGGAGCCTT...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACGTGCATATTCTGCTGTaGTTGGGTATTTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SELGSLSQKSLQEISYSDVHILL*LGICCK
Trigger: CTTGCAGCAAATACCCAATCACAGCAGAATATGCAC...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGCTGGGAAACATTCTTaGAGACCTTTCTTTTTAACT +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSAGKHS*RPFFLT
Trigger: AGTTAAAAAGAAAGGTCTTCAAGAATGTTTCCCAGC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCATGGTATGTACACACTTaGAGTTACTTTAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: EMSGEADILIHSLYTGSSWYVHT*SYFKRF
Trigger: GAACCTCTTAAAGTAACTGCAAGTGTGTACATACCA...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAAGCATGTGTTCCCCTTaGAACAGCTGTACTATGGCC +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQSMCSP*NSCTMA
Trigger: GGCCATAGTACAGCTGTTGCAAGGGGAACACATGCT...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACGCAGTGCTGTACTCTTaGACTACAGTTTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYAVLYS*TTVFRW
Trigger: CCACCTGAAAACTGTAGTGCAAGAGTACAGCACTGC...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAATGGCTACAGAGCAGATaGAGTGCTGTACTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQWLQSR*SAVLLH
Trigger: GTGCAAGAGTACAGCACTGCATCTGCTCTGTAGCCA...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTACTCCTGAACATTTGTaGCATAGTTATTACTTTTCC +
Preference number: 4 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSTPEHL*HSYYFS
Trigger: GGAAAAGTAATAACTATGGCACAAATGTTCAGGAGT...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCATATTCTGCTGTGATTaGGTATTTGCTGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFIFCCD*VFAARA
Trigger: GGCTCTTGCAGCAAATACCCAATCACAGCAGAATAT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACACTAAAAATGCTGATCTaGGCTGGGAGTGCAATCACA +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETLKMLI*AGSAIT
Trigger: TGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAG...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGGACCCTTCTTCATATaGTCACCAATAAAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFGPFFI*SPIKVA
Trigger: TGCAACTTTTATTGGTGATCATATGAAGAAGGGTCC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCCCTCATTGCAATGTTTaGTCAAATAAATCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFPHCNV*SNKSRA
Trigger: GGCTCTCGATTTATTTGAGCAAACATTGCAATGAGG...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACATCCTGTTACGATCGTaGCCCCATCATCTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: SELGSLSQKSLQEISYSDILLRS*PHHLLK
Trigger: TTTTAACAGATGATGGGGCCACGATCGTAACAGGAT...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACATTCCTCCTCAAATATTaGCTCAGTATCCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETFLLKY*LSILHV
Trigger: GACATGCAGGATACTGAGCCAATATTTGAGGAGGAA...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGAGGTTCATTACTATTaGGAATCACACTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFEVHYY*ESHSAD
Trigger: ATCAGCTGAGTGTGATTCCCAATAGTAATGAACCTC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAACTTGCACAATATTACTaGAAGTTGGAGGGGAACCCC +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQLAQYY*KLEGNP
Trigger: GGGGTTCCCCTCCAACTTCCAGTAATATTGTGCAAG...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACACATATGCCACACATATaGGAACTACAGGATTGCAAG +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETHMPHI*ELQDCK
Trigger: CTTGCAATCCTGTAGTTCCCATATGTGTGGCATATG...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TTGATTATCTCCACCCTTTCTAGACATTTCAGGCTTTTACATGGCAGGACTTCATACACACTAACTCACTaGACAGCAATCACATTCCTA +
Preference number: 4 (lower is better)
Translates to: LIISTLSRHFRLLHGRTSYTLTH*TAITFL
Trigger: TAGGAATGTGATTGCTGTCCAGTGAGTTAGTGTGTA...TGAAGTCCTGCCATGTAAAAGCCTGAAATGTCTAGAAAGGGTGGAGATAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585669.1
3UTR CAA 72 bp GAGTCTTCATTTTCGGTACACGCTATGCTTCTGAACTaGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTA +
Preference number: 4 (lower is better)
Translates to: ESSFSVHAMLLN*ALYHKSPFKRL
Trigger: TAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATAGCGTGTACCGAAAATGAAGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCAATTTGCAGTTCTACTaGAAGATCCCAGAGACATAT +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFNLQFY*KIPETY
Trigger: ATATGTCTCTGGGATCTTTCAGTAGAACTGCAAATT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR TCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACATTTTCACTAGGACCTaGACACAACAAGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: SELGSLSQKSLQEISYSDIFTRT*TQQGIV
Trigger: GACTATTCCTTGTTGTGTTCAGGTCCTAGTGAAAAT...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAATAAGCAACCAGTGGTaGTGTCATCGTCAACAAGGT +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQISNQW*CHRQQG
Trigger: ACCTTGTTGACGATGACATCACCACTGGTTGCTTAT...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACGCTCGAGGATTAATTTaGAGTTCTACTGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: SELGSLSQKSLQEISYSDARGLI*SSTERS
Trigger: GGATCTTTCAGTAGAACTGCAAATTAATCCTCGAGC...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCCTCTCCACTTTCAGATaGACTCACAATATACTGTTT +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFLSTFR*THNILF
Trigger: AAACAGTATATTGTGAGTGCATCTGAAAGTGGAGAG...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACACTGCCAGATGCTTTTTaGAAATTCTCTGGGGAAATA +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETLPDAF*KFSGEI
Trigger: TATTTCCCCAGAGAATTTGCAAAAAGCATCTGGCAG...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACTTCCTCCTCAAATATTaGCTCAGTATCCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYFLLKY*LSILHV
Trigger: GACATGCAGGATACTGAGCCAATATTTGAGGAGGAA...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAATTAAAGGTGTACGCTaGGATGACAATGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETIKGVR*DDNAEF
Trigger: AAACTCTGCATTGTCATCCCAGCGTACACCTTTAAT...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACATGGTATGTACACACTTaGAGTTACTTTAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETWYVHT*SYFKRF
Trigger: GAACCTCTTAAAGTAACTGCAAGTGTGTACATACCA...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAGCAAGAGTTGTTGTGTaGATATTCTGCTGTGATTGG +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQARVVV*IFCCDW
Trigger: CCAATCACAGCAGAATATGCACACAACAACTCTTGC...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAAGTGACGTGTTCATCTaGCAAAAAGAAATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQSDVFI*QKEMWL
Trigger: CAGCCACATTTCTTTTTGGCAGATGAACACGTCACT...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCACTCCTGAACATTTGTaGCATAGTTATTACTTTTCC +
Preference number: 4 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFTPEHL*HSYYFS
Trigger: GGAAAAGTAATAACTATGGCACAAATGTTCAGGAGT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAGTTTCTTTCACTTGTTaGAAGAGAACTGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQVSFTC*KRTAAR
Trigger: ACGAGCAGCAGTTCTCTTCCAACAAGTGAAAGAAAC...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACATTAAAGGTGTACGCTaGGATGACAATGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYIKGVR*DDNAEF
Trigger: AAACTCTGCATTGTCATCCCAGCGTACACCTTTAAT...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAGCTCGAGGATTAATTTaGAGTTCTACTGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQARGLI*SSTERS
Trigger: GGATCTTTCAGTAGAACTGCAAATTAATCCTCGAGC...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAATGACCAAACAACAGTaGTCGAGGATTAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQMTKQQ*SRINLQ
Trigger: CTGCAAATTAATCCTCGAGCACTGTTGTTTGGTCAT...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR GCA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACTATGGAAATATTCTCTaGATCCATAGAAGAACCGAG +
Preference number: 4 (lower is better)
Translates to: YASELGSLSQKSLQEISYYGNIL*IHRRTE
Trigger: CTCGGTTCTTCTATGGATGCAGAGAATATTTCCATA...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR GCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAACTGCCAGATGCTTTTTaGAAATTCTCTGGGGAAATA +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQLPDAF*KFSGEI
Trigger: TATTTCCCCAGAGAATTTGCAAAAAGCATCTGGCAG...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAAGACAAACAAGTGATTaGTGCTGTATGACCAAACAA +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQRQTSD*CCMTKQ
Trigger: TTGTTTGGTCATACAGCATCAATCACTTGTTTGTCT...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAACCAGAAGAATCACCCTaGATTAACAGTTTATGGAAA +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQPEESP*INSLWK
Trigger: TTTCCATAAACTGTTAATTCAGGGTGATTCTTCTGG...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR TCA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAATATGTCCCAAATTATaGCTGAAAAATCCACACCTC +
Preference number: 4 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQICPKL*LKNPHL
Trigger: GAGGTGTGGATTTTTCAGTCATAATTTGGGACATAT...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS GCA 90 bp GTGATGAAGGCGGGTGGTCTGGCGGTGGCAATGAGCGAGAGGGCATaGCTCGCAGAGCGGGCCGAGTCAGCTGCTGGGCTCAGAGGCAAC +
Preference number: 5 (lower is better)
Translates to: VMKAGGLAVAMSERA*LAERAESAAGLRGN
Trigger: GTTGCCTCTGAGCCCAGCAGCTGACTCGGCCCGCTCTGCGAGGCATGCCCTCTCGCTCATTGCCACCGCCAGACCACCCGCCTTCATCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000586124.2
ENST00000615645.4
CDS GCA 90 bp GCGCTATACAGCCGCCGTCTCCCCAGTGATACTGCAAGGTGCCGGTaGCGCCGCCGCCGCCACTGCAGTAAATCAGCTGACACCAGCCCC +
Preference number: 5 (lower is better)
Translates to: ALYSRRLPSDTARCR*RRRRHCSKSADTSP
Trigger: GGGGCTGGTGTCAGCTGATTTACTGCAGTGGCGGCGGCGGCGGCACCGGCACCTTGCAGTATCACTGGGGAGACGGCGGCTGTATAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589935.1
CDS-3UTR CAA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTATGAGCCGGGCCAGCTaGAGGGCATTGTGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLMSRAS*RALWEP
Trigger: CGGCTCCCACAATGCCCTCAAGCTGGCCCGGCTCAT...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS CCA 90 bp AGGATAGGGCGGAACTACGGAGGATGCGGGGTGCGTAGATCCTGCTaGGATAATCCGTGGGGCGGCAAGCGCTATACAGCCGCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: RIGRNYGGCGVRRSC*DNPWGGKRYTAAVS
Trigger: GGAGACGGCGGCTGTATAGCGCTTGCCGCCCCACGGATTATCCCAGCAGGATCTACGCACCCCGCATCCTCCGTAGTTCCGCCCTATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS GCA 90 bp ACAAGGATAGGGCGGAACTACGGAGGATGCGGGGTGCGTAGATCCTaGTGGGATAATCCGTGGGGCGGCAAGCGCTATACAGCCGCCGTC +
Preference number: 5 (lower is better)
Translates to: TRIGRNYGGCGVRRS*WDNPWGGKRYTAAV
Trigger: GACGGCGGCTGTATAGCGCTTGCCGCCCCACGGATTATCCCAGCAGGATCTACGCACCCCGCATCCTCCGTAGTTCCGCCCTATCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTCTCCAAGCATCGATCTaGCCATCTTCGGGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLLQASI*PSSGQH
Trigger: ATGCTGGCCCGAAGATGGCAAGATCGATGCTTGGAG...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTCTTCCTCCTGGACTTTaGCTTCAGGCCCTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLLPPGL*LQALRH
Trigger: ATGCCTCAGGGCCTGAAGCAAAAGTCCAGGAGGAAG...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATGCCAGCTTGAGGGCATaGTGGGAGCCGGGGGACGCG +
Preference number: 5 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDASLRA*WEPGDA
Trigger: CGCGTCCCCCGGCTCCCACAATGCCCTCAAGCTGGC...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS CCA 90 bp AACTACGGAGGATGCGGGGTGCGTAGATCCTGCTGGGATAATCCGTaGGGCGGCAAGCGCTATACAGCCGCCGTCTCCCCAGTGATACTG +
Preference number: 5 (lower is better)
Translates to: NYGGCGVRRSCWDNP*GGKRYTAAVSPVIL
Trigger: CAGTATCACTGGGGAGACGGCGGCTGTATAGCGCTTGCCGCCCCACGGATTATCCCAGCAGGATCTACGCACCCCGCATCCTCCGTAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS GCA 90 bp GGCAATGAGCGAGAGGGCATGCCTCGCAGAGCGGGCCGAGTCAGCTaGTGGGCTCAGAGGCAACCCCATTGTGATGTTGGCAAGTTGTTT +
Preference number: 5 (lower is better)
Translates to: GNEREGMPRRAGRVS*WAQRQPHCDVGKLF
Trigger: AAACAACTTGCCAACATCACAATGGGGTTGCCTCTGAGCCCAGCAGCTGACTCGGCCCGCTCTGCGAGGCATGCCCTCTCGCTCATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000586124.2
ENST00000615645.4
CDS CCA 90 bp AATGAGCGAGAGGGCATGCCTCGCAGAGCGGGCCGAGTCAGCTGCTaGGCTCAGAGGCAACCCCATTGTGATGTTGGCAAGTTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: NEREGMPRRAGRVSC*AQRQPHCDVGKLFL
Trigger: GAGAAACAACTTGCCAACATCACAATGGGGTTGCCTCTGAGCCCAGCAGCTGACTCGGCCCGCTCTGCGAGGCATGCCCTCTCGCTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000586124.2
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTAACAATAGCGGTAGCTaGCTTCCGTCTTTCCTCGTA +
Preference number: 5 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLNNSGS*LPSFLV
Trigger: TACGAGGAAAGACGGAAGCAAGCTACCGCTATTGTT...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTAGGATGACGTTGCGGTaGGAAGTCCAGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSRMTLR*EVQMSR
Trigger: CCGGCTCATCTGGACTTCCAACCGCAACGTCATCCT...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAAGGCCTACCCACGCTaGTGGCCCAGGGCTATTGCT +
Preference number: 5 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDKAYPR*WPRAIA
Trigger: AGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTTTCTTCAGTCAGGAGTaGAATAATCAACGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLFFSQE*NNQRFH
Trigger: GTGGAAGCGTTGATTATTCAACTCCTGACTGAAGAA...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGCTCCAAGCATCGATCTaGCCATCTTCGGGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRLQASI*PSSGQH
Trigger: ATGCTGGCCCGAAGATGGCAAGATCGATGCTTGGAG...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TCAAAGGGCAATAATTTCAATCGTGAGGACTGCCACATGACCTCAACACCCAGTGCCAGCTTGAGGGCATaGTGGGAGCCGGGGGACGCG +
Preference number: 5 (lower is better)
Translates to: SKGNNFNREDCHMTSTPSASLRA*WEPGDA
Trigger: CGCGTCCCCCGGCTCCCACAATGCCCTCAAGCTGGC...ACTGGGTGTTGAGGTCATGTGGCAGTCCTCACGATTGAAATTATTGCCCTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAGGATGACGTTGCGGTaGGAAGTCCAGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDRMTLR*EVQMSR
Trigger: CCGGCTCATCTGGACTTCCAACCGCAACGTCATCCT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR CAA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGGAGCCATCCGTGTGTTaGCGGCAGGCTGCCTACCAC +
Preference number: 5 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVEPSVC*RQAAYH
Trigger: GTGGTAGGCAGCCTGCCGCAAACACACGGATGGCTC...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTTTCTACTGGCCTTGGTaGCCTGTGCAGACGGAATAC +
Preference number: 5 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSFYWPW*PVQTEY
Trigger: GTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGAA...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGAGCTTTCTACTGGCCTaGGTTGCCTGTGCAGACGGA +
Preference number: 5 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRSFLLA*VACADG
Trigger: TCCGTCTGCACAGGCAACCAAGGCCAGTAGAAAGCT...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGGAGCATGTGTTCCCCTaGCAACAGCTGTACTATGGC +
Preference number: 5 (lower is better)
Translates to: PQHPVSERPDSSSTSEVREHVFP*QQLYYG
Trigger: GCCATAGTACAGCTGTTGCAAGGGGAACACATGCTC...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp AGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGGCCCCCTGGCTTTTAGGTTTGTCTTTATaGCTTGAACCATCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: RPTHACGPGLLLLWAPWLLGLSL*LEPSGS
Trigger: ACTCCCTGATGGTTCAAGCAATAAAGACAAACCTAA...AAGCCAGGGGGCCCAGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTCAATATTACTGGAAGTaGGAGGGGAACCCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSQYYWK*EGNPLP
Trigger: AGGCAAGGGGTTCCCCTCCAACTTCCAGTAATATTG...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATCTCCAAGCATCGATCTaGCCATCTTCGGGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDLQASI*PSSGQH
Trigger: ATGCTGGCCCGAAGATGGCAAGATCGATGCTTGGAG...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCGAATCCCTCAGGAATTaGGCTAGAGCTTCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCESLRN*ARASRS
Trigger: AGACCTCGAAGCTCTAGCCAAATTCCTGAGGGATTC...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTGAATCCCTCAGGAATTaGGCTAGAGCTTCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSESLRN*ARASRS
Trigger: AGACCTCGAAGCTCTAGCCAAATTCCTGAGGGATTC...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTTGTGATGTTGGCAAGTaGTTTCTCGGCATCGGCACA +
Preference number: 5 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSCDVGK*FLGIGT
Trigger: TGTGCCGATGCCGAGAAACAACTTGCCAACATCACA...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTGCTGTGATTGGGTATTaGCTGCAAGAGCCGTATGTC +
Preference number: 5 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSAVIGY*LQEPYV
Trigger: GACATACGGCTCTTGCAGCAAATACCCAATCACAGC...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGCCAGCTTGAGGGCATaGTGGGAGCCGGGGGACGCG +
Preference number: 5 (lower is better)
Translates to: EMSGEADILIHSLYTGSSASLRA*WEPGDA
Trigger: CGCGTCCCCCGGCTCCCACAATGCCCTCAAGCTGGC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACGCCATGAGGATGACGTaGCGGTTGGAAGTCCAGATG +
Preference number: 5 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHAMRMT*RLEVQM
Trigger: CATCTGGACTTCCAACCGCAACGTCATCCTCATGGC...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGTTCTACTGGCCTTGGTaGCCTGTGCAGACGGAATAC +
Preference number: 5 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVFYWPW*PVQTEY
Trigger: GTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGAA...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTTTCTACTGGCCTTGGTaGCCTGTGCAGACGGAATAC +
Preference number: 5 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSFYWPW*PVQTEY
Trigger: GTATTCCGTCTGCACAGGCAACCAAGGCCAGTAGAA...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS GCA 90 bp TGTACTGAGGTAAGTAAGGAGCCCAGGCATCAATGGCTTCCTTCCTaGCTGCCTGCTCAATTCTTCTCAGTTCCGCCAGAAGCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: CTEVSKEPRHQWLPS*LPAQFFSVPPEAGP
Trigger: AGGCCCTGCTTCTGGCGGAACTGAGAAGAATTGAGCAGGCAGGCAGGAAGGAAGCCATTGATGCCTGGGCTCCTTACTTACCTCAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000591524.1
ENST00000615645.4
CDS GCA 90 bp ACTTTTGCTTCAGGCCCTGAGGCATCAGGAGCCGTGGTGATAGTCTaGGCGGCTTCTGATGTGACTCCAGGTGATATGACGTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: TFASGPEASGAVVIV*AASDVTPGDMTWSM
Trigger: CATAGACCACGTCATATCACCTGGAGTCACATCAGAAGCCGCGCAGACTATCACCACGGCTCCTGATGCCTCAGGGCCTGAAGCAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCAACCCCATTGTGATGTaGGCAAGTTGTTTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCNPIVM*ASCFSA
Trigger: TGCCGAGAAACAACTTGCCAACATCACAATGGGGTT...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCTGTGATTGGGTATTaGCTGCAAGAGCCGTATGTC +
Preference number: 5 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVAVIGY*LQEPYV
Trigger: GACATACGGCTCTTGCAGCAAATACCCAATCACAGC...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGATGAGCCGGGCCAGCTaGAGGGCATTGTGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEMSRAS*RALWEP
Trigger: CGGCTCCCACAATGCCCTCAAGCTGGCCCGGCTCAT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR CAA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTACCACTGTGTCCTCTaGTGTTCGGTGGGATCGAAT +
Preference number: 5 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHYHCVL*CSVGSN
Trigger: ATTCGATCCCACCGAACACAAGAGGACACAGTGGTA...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTTTAGGTAAATTTCCCTaGTCAGATGCCTCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSLGKFP*SDASEA
Trigger: GGCTTCTGAGGCATCTGACAAGGGAAATTTACCTAA...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTGTCAATGGCTTTGATTaGCTGGACCGATATTCAGGA +
Preference number: 5 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSVNGFD*LDRYSG
Trigger: TCCTGAATATCGGTCCAGCAAATCAAAGCCATTGAC...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGCAATATTACTGGAAGTaGGAGGGGAACCCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAQYYWK*EGNPLP
Trigger: AGGCAAGGGGTTCCCCTCCAACTTCCAGTAATATTG...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTCTCGTGCAAGAGTTGTaGTGTGCATATTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSLVQEL*CAYSAV
Trigger: CACAGCAGAATATGCACACAACAACTCTTGCACGAG...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGCTCGTGCAAGAGTTGTaGTGTGCATATTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVLVQEL*CAYSAV
Trigger: CACAGCAGAATATGCACACAACAACTCTTGCACGAG...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GTCCGGATGTCGTACAGGGCCACTGAACCATGGCGAGCTCCAACTGCTATTCTGCTCGTGCAAGAGTTGTaGTGTGCATATTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: VRMSYRATEPWRAPTAILLVQEL*CAYSAV
Trigger: CACAGCAGAATATGCACACAACAACTCTTGCACGAG...CAGAATAGCAGTTGGAGCTCGCCATGGTTCAGTGGCCCTGTACGACATCCGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR CAA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGTGTGGCTGTCAGTGTTaGAGTAGGTGGCAAGATATC +
Preference number: 5 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRCGCQC*SRWQDI
Trigger: GATATCTTGCCACCTACTCAAACACTGACAGCCACA...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGCCATCCGTGTGTTaGCGGCAGGCTGCCTACCAC +
Preference number: 5 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLEPSVC*RQAAYH
Trigger: GTGGTAGGCAGCCTGCCGCAAACACACGGATGGCTC...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS CCA 90 bp GACATATGGCCTCCTCTTGACAAGAGGCCAAACGATACGGTGCAGTaGGGTTTCAGCATTCCAAGGCGATCCAGGCAAACTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: DIWPPLDKRPNDTVQ*GFSIPRRSRQTSSS
Trigger: ACTGGATGAAGTTTGCCTGGATCGCCTTGGAATGCTGAAACCCCACTGCACCGTATCGTTTGGCCTCTTGTCAAGAGGAGGCCATATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS-3UTR CAA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTGGCTGTTTCCTGCCATaGTGTTTGTGTTTTCAAACC +
Preference number: 5 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSGCFLP*CLCFQT
Trigger: GGTTTGAAAACACAAACACAATGGCAGGAAACAGCC...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATATCCCAGAGACATATTaGTCCGTCGTGACATCCTGT +
Preference number: 5 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDIPETY*SVVTSC
Trigger: ACAGGATGTCACGACGGACAAATATGTCTCTGGGAT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTATTCCTCCTCAAATATaGGCTCAGTATCCTGCATGT +
Preference number: 5 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSIPPQI*AQYPAC
Trigger: ACATGCAGGATACTGAGCCAATATTTGAGGAGGAAT...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp ACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTCCTCTTTAGGTAAATTTCCCTaGTCAGATGCCTCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: TEYVKGLPTLVAQGYCSSLGKFP*SDASEA
Trigger: GGCTTCTGAGGCATCTGACAAGGGAAATTTACCTAA...AGAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp GTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCCCAGGGCTATTGCTTCTTCAGTCAGGAGTaGAATAATCAACGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: VQTEYVKGLPTLVAQGYCFFSQE*NNQRFH
Trigger: GTGGAAGCGTTGATTATTCAACTCCTGACTGAAGAA...GCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACACATATGGCCTCCTCTaGACAAGAGGCCAAACGATA +
Preference number: 5 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHTYGLL*TRGQTI
Trigger: TATCGTTTGGCCTCTTGTCAAGAGGAGGCCATATGT...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATACATATGGCCTCCTCTaGACAAGAGGCCAAACGATA +
Preference number: 5 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDTYGLL*TRGQTI
Trigger: TATCGTTTGGCCTCTTGTCAAGAGGAGGCCATATGT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATGACAGGTGCAGCAACTaGTTTAATCTGTCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDDRCSN*FNLSLH
Trigger: GTGCAAGGACAGATTAAACAAGTTGCTGCACCTGTC...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAACCCCATTGTGATGTaGGCAAGTTGTTTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDNPIVM*ASCFSA
Trigger: TGCCGAGAAACAACTTGCCAACATCACAATGGGGTT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGTGTCTGTGTACCTCTTaGGCTATGGTGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: TSTPSVRTARFKQHFRGACLCTS*AMVVMK
Trigger: CTTCATCACCACCATAGCCAAAGAGGTACACAGACA...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AAACTACCTGGTGACAGGATGGCCACATCCTGCAGAGCATGTGTGCGTGCCTCTTGTCTGTGTACCTCTTaGGCTATGGTGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: KLPGDRMATSCRACVRASCLCTS*AMVVMK
Trigger: CTTCATCACCACCATAGCCAAAGAGGTACACAGACA...AGAGGCACGCACACATGCTCTGCAGGATGTGGCCATCCTGTCACCAGGTAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAGCCAGCTTGAGGGCATaGTGGGAGCCGGGGGACGCG +
Preference number: 5 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETASLRA*WEPGDA
Trigger: CGCGTCCCCCGGCTCCCACAATGCCCTCAAGCTGGC...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGAGCCATCCGTGTGTTaGCGGCAGGCTGCCTACCAC +
Preference number: 5 (lower is better)
Translates to: EMSGEADILIHSLYTGSSEPSVC*RQAAYH
Trigger: GTGGTAGGCAGCCTGCCGCAAACACACGGATGGCTC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGAAGGCCTACCCACGCTaGTGGCCCAGGGCTATTGCT +
Preference number: 5 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEKAYPR*WPRAIA
Trigger: AGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS GCA 90 bp TCAGTGACATATGGCCTCCTCTTGACAAGAGGCCAAACGATACGGTaGAGTGGGGTTTCAGCATTCCAAGGCGATCCAGGCAAACTTCAT +
Preference number: 5 (lower is better)
Translates to: SVTYGLLLTRGQTIR*SGVSAFQGDPGKLH
Trigger: ATGAAGTTTGCCTGGATCGCCTTGGAATGCTGAAACCCCACTGCACCGTATCGTTTGGCCTCTTGTCAAGAGGAGGCCATATGTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS CCA 90 bp AATATTACTGGAAGTTGGAGGGGAACCCCTTGCCTTAGAAAGGTCTaGGGTGCTTGGTCTAGGTGGCCTGGTAGGACCCTTCTTCATATG +
Preference number: 5 (lower is better)
Translates to: NITGSWRGTPCLRKV*GAWSRWPGRTLLHM
Trigger: CATATGAAGAAGGGTCCTACCAGGCCACCTAGACCAAGCACCCCAGACCTTTCTAAGGCAAGGGGTTCCCCTCCAACTTCCAGTAATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000591524.1
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATGGCTGTTTCCTGCCATaGTGTTTGTGTTTTCAAACC +
Preference number: 5 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDGCFLP*CLCFQT
Trigger: GGTTTGAAAACACAAACACAATGGCAGGAAACAGCC...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGCTCACAATATACTGTTaGTCACTGGAAGCACAAGCT +
Preference number: 5 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRLTIYC*SLEAQA
Trigger: AGCTTGTGCTTCCAGTGACAAACAGTATATTGTGAG...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp CCTGCAGAGCATGTGTGCGTGCCTCTGAATCGACAGATGGCACGAGCGGGTTCTGTTTGTCTTTATTGCTaGAACCATCAGGGAGTTATG +
Preference number: 5 (lower is better)
Translates to: PAEHVCVPLNRQMARAGSVCLYC*NHQGVM
Trigger: CATAACTCCCTGATGGTTCAAGCAATAAAGACAAAC...AGAACCCGCTCGTGCCATCTGTCGATTCAGAGGCACGCACACATGCTCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp CCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGGATAGGGTCAATGGCTTaGATTTGCTGGACCGATATT +
Preference number: 5 (lower is better)
Translates to: PQHPVSERPDSSSTSEVRIGSMA*ICWTDI
Trigger: AATATCGGTCCAGCAAATCAAAGCCATTGACCCTAT...CCGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGGAATCCCTCAGGAATTaGGCTAGAGCTTCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVESLRN*ARASRS
Trigger: AGACCTCGAAGCTCTAGCCAAATTCCTGAGGGATTC...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCATGAGCCGGGCCAGCTaGAGGGCATTGTGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFMSRAS*RALWEP
Trigger: CGGCTCCCACAATGCCCTCAAGCTGGCCCGGCTCAT...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGATTTTTGTGCTTCTGTaGCACCAAGCAACAAGAGCG +
Preference number: 5 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAIFVLL*HQATRA
Trigger: CGCTCTTGTTGCTTGGTGCAACAGAAGCACAAAAAT...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACATTTTTGTGCTTCTGTaGCACCAAGCAACAAGAGCG +
Preference number: 5 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHIFVLL*HQATRA
Trigger: CGCTCTTGTTGCTTGGTGCAACAGAAGCACAAAAAT...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GATGGTTTGGTTAGAGCAGTAGGTCAGGATCTTCACATGTGTTCCCGCTCCTTTTGTGTTCCCGCTCCTTaGTCACCTCTCCTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: DGLVRAVGQDLHMCSRSFCVPAP*SPLLCL
Trigger: CAGGCAAAGGAGAGGTGACAAAGGAGCGGGAACACA...AAAGGAGCGGGAACACATGTGAAGATCCTGACCTACTGCTCTAACCAAACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR CAA 90 bp GACTGCCACATGACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTCAAGGAGGTGTTCCTaGATGTTCTCTTTGATCGTT +
Preference number: 5 (lower is better)
Translates to: DCHMTSTPSVRTARFKQHSRRCS*MFSLIV
Trigger: AACGATCAAAGAGAACATCAAGGAACACCTCCTTGA...GTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGTCATGTGGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGATAGGGTCAATGGCTTaGATTTGCTGGACCGATATT +
Preference number: 5 (lower is better)
Translates to: TSTPSVRTARFKQHFRGAIGSMA*ICWTDI
Trigger: AATATCGGTCCAGCAAATCAAAGCCATTGACCCTAT...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGCTTCCTCCTGGACTTTaGCTTCAGGCCCTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLELPPGL*LQALRH
Trigger: ATGCCTCAGGGCCTGAAGCAAAAGTCCAGGAGGAAG...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGCCATGAGGATGACGTaGCGGTTGGAAGTCCAGATG +
Preference number: 5 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLAMRMT*RLEVQM
Trigger: CATCTGGACTTCCAACCGCAACGTCATCCTCATGGC...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS-3UTR CAA 90 bp TGGCCTTGGTTGCCTGTGCAGACGGAATACGTGAAAGGCCTACCCACGCTTGTGGCTATGCTTCTGAACTaGGCTCTTTATCACAAAAGT +
Preference number: 5 (lower is better)
Translates to: WPWLPVQTEYVKGLPTLVAMLLN*ALYHKS
Trigger: ACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATAGC...CACAAGCGTGGGTAGGCCTTTCACGTATTCCGTCTGCACAGGCAACCAAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS CCA 90 bp GATCCCAGAGACATATTTGTCCGTCGTGACATCCTGTTACGATCGTaGCCCCATCATCTGTTAAAAGTACGGCTGAGATGCAATGTGTGG +
Preference number: 5 (lower is better)
Translates to: DPRDIFVRRDILLRS*PHHLLKVRLRCNVW
Trigger: CCACACATTGCATCTCAGCCGTACTTTTAACAGATGATGGGGCCACGATCGTAACAGGATGTCACGACGGACAAATATGTCTCTGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000593058.1
ENST00000615645.4
CDS-3UTR CAA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACATGAGCCGGGCCAGCTaGAGGGCATTGTGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: YASELGSLSQKSLQEISYMSRAS*RALWEP
Trigger: CGGCTCCCACAATGCCCTCAAGCTGGCCCGGCTCAT...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGCCATGAGGATGACGTaGCGGTTGGAAGTCCAGATG +
Preference number: 5 (lower is better)
Translates to: EMSGEADILIHSLYTGSSAMRMT*RLEVQM
Trigger: CATCTGGACTTCCAACCGCAACGTCATCCTCATGGC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CATGGATTGTCTGACATTTTCCAGTCCGGATGTCGTACAGGGCCACTGAACCATTCATATGCCTGCTCTTaGGCTATGGTGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: HGLSDIFQSGCRTGPLNHSYACS*AMVVMK
Trigger: CTTCATCACCACCATAGCCAAAGAGCAGGCATATGA...ATGGTTCAGTGGCCCTGTACGACATCCGGACTGGAAAATGTCAGACAATCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS TCA 90 bp TTTGATCATACCGAGCTGAGACCTGATGAGGATATAGCAAACATGTaGCTTTGTTCCGATGACCACGGAGTGTTCTGTGAGGTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: FDHTELRPDEDIANM*LCSDDHGVFCEVAN
Trigger: GTTGGCCACCTCACAGAACACTCCGTGGTCATCGGAACAAAGTCACATGTTTGCTATATCCTCATCAGGTCTCAGCTCGGTATGATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585754.1
CDS TCA 90 bp ATCCAATGCACCAGTATCCATTTGCCAGACGTACACAGAACCATCTaGACACCCCACCACCAGGTAATCATCAGAAGGCCTCCATTTGAT +
Preference number: 5 (lower is better)
Translates to: IQCTSIHLPDVHRTI*TPHHQVIIRRPPFD
Trigger: ATCAAATGGAGGCCTTCTGATGATTACCTGGTGGTGGGGTGTTCAGATGGTTCTGTGTACGTCTGGCAAATGGATACTGGTGCATTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS TCA 90 bp AGGCCTGTGAGAATGGCACTGCATACTTACTGGGAATATGAAATGTaGAGAACGAGACGGTTGATCCCAGAAGCACATCAACAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: RPVRMALHTYWEYEM*RTRRLIPEAHQQLH
Trigger: GTGGAGCTGTTGATGTGCTTCTGGGATCAACCGTCTCGTTCTTCACATTTCATATTCCCAGTAAGTATGCAGTGCCATTCTCACAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585824.1
CDS-3UTR CAA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGTACCACTGTGTCCTCTaGTGTTCGGTGGGATCGAAT +
Preference number: 5 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEYHCVL*CSVGSN
Trigger: ATTCGATCCCACCGAACACAAGAGGACACAGTGGTA...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp GTGCGGTTGAGATGGCTAAAAATGCTGATCTGGGCTGGGAGTGCAATCACAGTGATTCCTCCTCAAATATaGGCTCAGTATCCTGCATGT +
Preference number: 5 (lower is better)
Translates to: VRLRWLKMLIWAGSAITVIPPQI*AQYPAC
Trigger: ACATGCAGGATACTGAGCCAATATTTGAGGAGGAAT...CACTGTGATTGCACTCCCAGCCCAGATCAGCATTTTTAGCCATCTCAACCGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGAGCATGTGTTCCCCTaGCAACAGCTGTACTATGGC +
Preference number: 5 (lower is better)
Translates to: EMSGEADILIHSLYTGSSEHVFP*QQLYYG
Trigger: GCCATAGTACAGCTGTTGCAAGGGGAACACATGCTC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGTCCTTGATGTTCTCTTaGATCGTTTCTTTCACTTGT +
Preference number: 5 (lower is better)
Translates to: TSTPSVRTARFKQHFRGASLMFS*IVSFTC
Trigger: ACAAGTGAAAGAAACGATCAAAGAGAACATCAAGGA...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTATGTGATGTTGGCAAGTaGTTTCTCGGCATCGGCACA +
Preference number: 5 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLCDVGK*FLGIGT
Trigger: TGTGCCGATGCCGAGAAACAACTTGCCAACATCACA...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp ATGGCGAGCTCCAACTGCTATTCTGTGATTCCGCTCATAATAGCTGACCATGTAGCTGTGATTGGGTATTaGCTGCAAGAGCCGTATGTC +
Preference number: 5 (lower is better)
Translates to: MASSNCYSVIPLIIADHVAVIGY*LQEPYV
Trigger: GACATACGGCTCTTGCAGCAAATACCCAATCACAGC...TACATGGTCAGCTATTATGAGCGGAATCACAGAATAGCAGTTGGAGCTCGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR CAA 90 bp AGGCCCCTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAGGAACAGTATAGATTaGCCGTCAATGGAAATAACA +
Preference number: 5 (lower is better)
Translates to: RPLGTIWCEEGQSNIGLDRNSID*PSMEIT
Trigger: TGTTATTTCCATTGACGGCAAATCTATACTGTTCCT...ATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAGGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp ACCTCAACACCCAGTGTCAGAACGGCCAGATTCAAGCAGCACTTCAGAGGTGCGAGGAACAGTATAGATTaGCCGTCAATGGAAATAACA +
Preference number: 5 (lower is better)
Translates to: TSTPSVRTARFKQHFRGARNSID*PSMEIT
Trigger: TGTTATTTCCATTGACGGCAAATCTATACTGTTCCT...CGCACCTCTGAAGTGCTGCTTGAATCTGGCCGTTCTGACACTGGGTGTTGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACAAGGCCTACCCACGCTaGTGGCCCAGGGCTATTGCT +
Preference number: 5 (lower is better)
Translates to: SELGSLSQKSLQEISYSDKAYPR*WPRAIA
Trigger: AGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTT...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS TCA 90 bp GCAAGACTACGTCTCGTCATAGCTTGTTTTAGGTTGACTGCTGGATaGCTAAGTGAATCAACAGCAGCAGGAACAGCTTCATCACAAGCG +
Preference number: 5 (lower is better)
Translates to: ARLRLVIACFRLTAG*LSESTAAGTASSQA
Trigger: CGCTTGTGATGAAGCTGTTCCTGCTGCTGTTGATTCACTTAGTCATCCAGCAGTCAACCTAAAACAAGCTATGACGAGACGTAGTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000587403.5
ENST00000590557.5
CDS-3UTR CAA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAATCCCAGAGACATATTaGTCCGTCGTGACATCCTGT +
Preference number: 5 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLIPETY*SVVTSC
Trigger: ACAGGATGTCACGACGGACAAATATGTCTCTGGGAT...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGAACAATAGCGGTAGCTaGCTTCCGTCTTTCCTCGTA +
Preference number: 5 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLENNSGS*LPSFLV
Trigger: TACGAGGAAAGACGGAAGCAAGCTACCGCTATTGTT...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTATGTCTGTGTACCTCTTaGGCTATGGTGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLCLCTS*AMVVMK
Trigger: CTTCATCACCACCATAGCCAAAGAGGTACACAGACA...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAAGGATGACGTTGCGGTaGGAAGTCCAGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETRMTLR*EVQMSR
Trigger: CCGGCTCATCTGGACTTCCAACCGCAACGTCATCCT...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS TCA 90 bp TTCCCCTTTAGCTCGTGCAAGAGTTGTTGTGTGCATATTCTGCTGTaGTTGGGTATTTGCTGCAAGAGCCGTATGTCTGTGTACCTCTTT +
Preference number: 5 (lower is better)
Translates to: FPFSSCKSCCVHILL*LGICCKSRMSVYLF
Trigger: AAAGAGGTACACAGACATACGGCTCTTGCAGCAAATACCCAATCACAGCAGAATATGCACACAACAACTCTTGCACGAGCTAAAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000586124.2
ENST00000615645.4
CDS-3UTR CAA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGGACAGGTGCAGCAACTaGTTTAATCTGTCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVDRCSN*FNLSLH
Trigger: GTGCAAGGACAGATTAAACAAGTTGCTGCACCTGTC...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000615645.4
CDS-3UTR CAA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCATGTGGCTGTCAGTGTTaGAGTAGGTGGCAAGATATC +
Preference number: 5 (lower is better)
Translates to: EMSGEADILIHSLYTGSSCGCQC*SRWQDI
Trigger: GATATCTTGCCACCTACTCAAACACTGACAGCCACA...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGTGTGGCTGTCAGTGTTaGAGTAGGTGGCAAGATATC +
Preference number: 5 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVCGCQC*SRWQDI
Trigger: GATATCTTGCCACCTACTCAAACACTGACAGCCACA...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGGATGACGTTGCGGTaGGAAGTCCAGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: YASELGSLSQKSLQEISYRMTLR*EVQMSR
Trigger: CCGGCTCATCTGGACTTCCAACCGCAACGTCATCCT...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAGCCATGAGGATGACGTaGCGGTTGGAAGTCCAGATG +
Preference number: 5 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETAMRMT*RLEVQM
Trigger: CATCTGGACTTCCAACCGCAACGTCATCCTCATGGC...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAATTTTTGTGCTTCTGTaGCACCAAGCAACAAGAGCG +
Preference number: 5 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLIFVLL*HQATRA
Trigger: CGCTCTTGTTGCTTGGTGCAACAGAAGCACAAAAAT...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp ATTATCTCCACCCTTTCTAGACATTTCAGGCTTTTACATGGCAGGACTTCAGCATTTGTCACCTCTCCTTaGCCTGGTATAGTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: IISTLSRHFRLLHGRTSAFVTSP*PGIVPD
Trigger: GTCAGGCACTATACCAGGCAAAGGAGAGGTGACAAA...TGCTGAAGTCCTGCCATGTAAAAGCCTGAAATGTCTAGAAAGGGTGGAGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS-3UTR CAA 90 bp TTTACATGGCAGGACTTCAGCAGACACATGTACACACTAACTCACTGGACAGCATTAACGGAAGATGGTTaGGTTAGAGCAGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: FTWQDFSRHMYTLTHWTALTEDG*VRAVGQ
Trigger: CTGACCTACTGCTCTAACCAAACCATCTTCCGTTAA...TGCTGTCCAGTGAGTTAGTGTGTACATGTGTCTGCTGAAGTCCTGCCATGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585669.1
CDS TCA 90 bp ATTTGCAGTTCTACTGAAAGATCCCAGAGACATATTTGTCCGTCGTaGCATCCTGTTACGATCGTGGCCCCATCATCTGTTAAAAGTACG +
Preference number: 5 (lower is better)
Translates to: ICSSTERSQRHICPS*HPVTIVAPSSVKST
Trigger: CGTACTTTTAACAGATGATGGGGCCACGATCGTAACAGGATGTCACGACGGACAAATATGTCTCTGGGATCTTTCAGTAGAACTGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000593058.1
ENST00000615645.4
CDS TCA 90 bp GATGCCTCAGAAGCCAAGAGGTTAGTTGCAAGGGTTTGTAGCTTATaGTGGGCCATATTTTTAAGAGCAGCAAGACTACGTCTCGTCATA +
Preference number: 5 (lower is better)
Translates to: DASEAKRLVARVCSL*WAIFLRAARLRLVI
Trigger: TATGACGAGACGTAGTCTTGCTGCTCTTAAAAATATGGCCCATCATAAGCTACAAACCCTTGCAACTAACCTCTTGGCTTCTGAGGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000587403.5
ENST00000590557.5
CDS TCA 90 bp CGATCCAGGCAAACTTCATCCAGTACTTCATTCAAACCCCAGGCGTaGAGGCAGGACATAAACAGCTTTGCAGTGTCCATAGTTAAATTA +
Preference number: 5 (lower is better)
Translates to: RSRQTSSSTSFKPQA*RQDINSFAVSIVKL
Trigger: TAATTTAACTATGGACACTGCAAAGCTGTTTATGTCCTGCCTTCACGCCTGGGGTTTGAATGAAGTACTGGATGAAGTTTGCCTGGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS TCA 90 bp TTCCTGCAAAGCTTTGTAGAGAAGCATGAGAACTCTTACGTGATATaGCGTGGTCTATGTACTGAGGTAAGTAAGGAGCCCAGGCATCAA +
Preference number: 5 (lower is better)
Translates to: FLQSFVEKHENSYVI*RGLCTEVSKEPRHQ
Trigger: TTGATGCCTGGGCTCCTTACTTACCTCAGTACATAGACCACGTCATATCACGTAAGAGTTCTCATGCTTCTCTACAAAGCTTTGCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591524.1
CDS TCA 90 bp TTGTCAAAGGCCTGTGAGAATGGCACTGCATACTTACTGGGAATATaGAATGTGAAGAACGAGACGGTTGATCCCAGAAGCACATCAACA +
Preference number: 5 (lower is better)
Translates to: LSKACENGTAYLLGI*NVKNETVDPRSTST
Trigger: TGTTGATGTGCTTCTGGGATCAACCGTCTCGTTCTTCACATTTCATATTCCCAGTAAGTATGCAGTGCCATTCTCACAGGCCTTTGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585824.1
CDS GCA 90 bp AAAATTTCCCCTTTAGCTCGTGCAAGAGTTGTTGTGTGCATATTCTaGTGTGATTGGGTATTTGCTGCAAGAGCCGTATGTCTGTGTACC +
Preference number: 5 (lower is better)
Translates to: KISPLARARVVVCIF*CDWVFAARAVCLCT
Trigger: GGTACACAGACATACGGCTCTTGCAGCAAATACCCAATCACAGCAGAATATGCACACAACAACTCTTGCACGAGCTAAAGGGGAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000586124.2
ENST00000615645.4
CDS-3UTR CAA 90 bp CTGGGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTATTCCTGCCATTGTGTTaGTGTTTTCAAACCTGTCAC +
Preference number: 5 (lower is better)
Translates to: LGTIWCEEGQSNIGLDNLFLPLC*CFQTCH
Trigger: GTGACAGGTTTGAAAACACAAACACAATGGCAGGAA...TAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCTGCACCAGTATCCATTaGCCAGACGTACACAGAACC +
Preference number: 5 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFCTSIH*PDVHRT
Trigger: GGTTCTGTGTACGTCTGGCAAATGGATACTGGTGCA...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGATCGTTTCTTTCACTaGTTGGAAGAGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: EMSGEADILIHSLYTGSSDRFFH*LEENCC
Trigger: GCAGCAGTTCTCTTCCAACAAGTGAAAGAAACGATC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACCTTCCTCCTGGACTTTaGCTTCAGGCCCTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: YASELGSLSQKSLQEISYLPPGL*LQALRH
Trigger: ATGCCTCAGGGCCTGAAGCAAAAGTCCAGGAGGAAG...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS GCA 90 bp ATGACTCTCAAAATTTCCCCTTTAGCTCGTGCAAGAGTTGTTGTGTaGATATTCTGCTGTGATTGGGTATTTGCTGCAAGAGCCGTATGT +
Preference number: 5 (lower is better)
Translates to: MTLKISPLARARVVV*IFCCDWVFAARAVC
Trigger: ACATACGGCTCTTGCAGCAAATACCCAATCACAGCAGAATATGCACACAACAACTCTTGCACGAGCTAAAGGGGAAATTTTGAGAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000586124.2
ENST00000591449.1
ENST00000615645.4
CDS GCA 90 bp AAAATTTCCCCTTTAGCTCGTGCAAGAGTTGTTGTGTGCATATTCTaGTGTGATTGGGTATTTGCTGCAAGAGCCGTATGTCTGTGTACA +
Preference number: 5 (lower is better)
Translates to: KISPLARARVVVCIF*CDWVFAARAVCLCT
Trigger: TGTACACAGACATACGGCTCTTGCAGCAAATACCCAATCACAGCAGAATATGCACACAACAACTCTTGCACGAGCTAAAGGGGAAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR CAA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACTGCACCAGTATCCATTaGCCAGACGTACACAGAACC +
Preference number: 5 (lower is better)
Translates to: SELGSLSQKSLQEISYSDCTSIH*PDVHRT
Trigger: GGTTCTGTGTACGTCTGGCAAATGGATACTGGTGCA...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGTTAGGTTTGTCTTTATaGCTTGAACCATCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLELGLSL*LEPSGS
Trigger: ACTCCCTGATGGTTCAAGCAATAAAGACAAACCTAA...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATAGGGTCAATGGCTTaGATTTGCTGGACCGATATT +
Preference number: 5 (lower is better)
Translates to: EMSGEADILIHSLYTGSSIGSMA*ICWTDI
Trigger: AATATCGGTCCAGCAAATCAAAGCCATTGACCCTAT...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGGGCTGGGAAACATTCTaGAAGACCTTTCTTTTTAAC +
Preference number: 5 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLEGWETF*KTFLFN
Trigger: GTTAAAAAGAAAGGTCTTCAAGAATGTTTCCCAGCC...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS TCA 90 bp TGTCATTGCCAGCCCTTCTTCACTTCCCTGTTTATCAGCTGTGTCTaGTATGTTCCAAATATTCAACCTTCCAGAAGAATCACCCTGAAT +
Preference number: 5 (lower is better)
Translates to: CHCQPFFTSLFISCV*YVPNIQPSRRITLN
Trigger: ATTCAGGGTGATTCTTCTGGAAGGTTGAATATTTGGAACATATCAGACACAGCTGATAAACAGGGAAGTGAAGAAGGGCTGGCAATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585754.1
CDS TCA 90 bp GAAATAAGAGCAGTATTCGGCCTAGAGGCTTCTTCAGTCAGGAGTTaGATAATCAACGCTTCCACATCAAAGAATAGCACATGTATGTCC +
Preference number: 5 (lower is better)
Translates to: EIRAVFGLEASSVRS*IINASTSKNSTCMS
Trigger: GGACATACATGTGCTATTCTTTGATGTGGAAGCGTTGATTATTCAACTCCTGACTGAAGAAGCCTCTAGGCCGAATACTGCTCTTATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000590557.5
CDS-3UTR CAA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCCCGGGTCTGTTAGGTTaGTCTTTATTGCTTGAACCA +
Preference number: 5 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFPGLLG*SLLLEP
Trigger: TGGTTCAAGCAATAAAGACAAACCTAACAGACCCGG...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp GGAACAATCTGGTGTGAGGAAGGACAGAGCAACATCGGCTTGGATAATTTAGAGTCCTTGATGTTCTCTTaGATCGTTTCTTTCACTTGT +
Preference number: 5 (lower is better)
Translates to: GTIWCEEGQSNIGLDNLESLMFS*IVSFTC
Trigger: ACAAGTGAAAGAAACGATCAAAGAGAACATCAAGGA...CTCTAAATTATCCAAGCCGATGTTGCTCTGTCCTTCCTCACACCAGATTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGTCAATGGCTTTGATTaGCTGGACCGATATTCAGGA +
Preference number: 5 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFVNGFD*LDRYSG
Trigger: TCCTGAATATCGGTCCAGCAAATCAAAGCCATTGAC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACAACCCCATTGTGATGTaGGCAAGTTGTTTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: SELGSLSQKSLQEISYSDNPIVM*ASCFSA
Trigger: TGCCGAGAAACAACTTGCCAACATCACAATGGGGTT...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACGCTGTGATTGGGTATTaGCTGCAAGAGCCGTATGTC +
Preference number: 5 (lower is better)
Translates to: YASELGSLSQKSLQEISYAVIGY*LQEPYV
Trigger: GACATACGGCTCTTGCAGCAAATACCCAATCACAGC...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GTACATAATGATGTCCATAACCTCCACGAGAAGATCCACAACATCTGTGGGCATGGCTGGGAAACATTCTaGAAGACCTTTCTTTTTAAC +
Preference number: 5 (lower is better)
Translates to: VHNDVHNLHEKIHNICGHGWETF*KTFLFN
Trigger: GTTAAAAAGAAAGGTCTTCAAGAATGTTTCCCAGCC...ATGCCCACAGATGTTGTGGATCTTCTCGTGGAGGTTATGGACATCATTATGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591449.1
CDS-3UTR CAA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAGCTATGCTTCTGAACTaGGCTCTTTATCACAAAAGT +
Preference number: 5 (lower is better)
Translates to: EMSGEADILIHSLYTGSSAMLLN*ALYHKS
Trigger: ACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATAGC...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GAAGCCACATATGTCTCTACATATACAAGGACAGGTCCAAATACAGTGCCAGTGGCTATGCTTCTGAACTaGGCTCTTTATCACAAAAGT +
Preference number: 5 (lower is better)
Translates to: EATYVSTYTRTGPNTVPVAMLLN*ALYHKS
Trigger: ACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATAGC...CACTGGCACTGTATTTGGACCTGTCCTTGTATATGTAGAGACATATGTGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCTTCCTGCCATTGTGTTaGTGTTTTCAAACCTGTCAC +
Preference number: 5 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFFLPLC*CFQTCH
Trigger: GTGACAGGTTTGAAAACACAAACACAATGGCAGGAA...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACCCGGGTCTGTTAGGTTaGTCTTTATTGCTTGAACCA +
Preference number: 5 (lower is better)
Translates to: SELGSLSQKSLQEISYSDPGLLG*SLLLEP
Trigger: TGGTTCAAGCAATAAAGACAAACCTAACAGACCCGG...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACGATCGTTTCTTTCACTaGTTGGAAGAGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: SELGSLSQKSLQEISYSDDRFFH*LEENCC
Trigger: GCAGCAGTTCTCTTCCAACAAGTGAAAGAAACGATC...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCTCAAGGAGGTGTTCCTaGATGTTCTCTTTGATCGTT +
Preference number: 5 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFSRRCS*MFSLIV
Trigger: AACGATCAAAGAGAACATCAAGGAACACCTCCTTGA...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAGTCAATGGCTTTGATTaGCTGGACCGATATTCAGGA +
Preference number: 5 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETVNGFD*LDRYSG
Trigger: TCCTGAATATCGGTCCAGCAAATCAAAGCCATTGAC...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAACAATATTACTGGAAGTaGGAGGGGAACCCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQQYYWK*EGNPLP
Trigger: AGGCAAGGGGTTCCCCTCCAACTTCCAGTAATATTG...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACCTCGTGCAAGAGTTGTaGTGTGCATATTCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: YASELGSLSQKSLQEISYLVQEL*CAYSAV
Trigger: CACAGCAGAATATGCACACAACAACTCTTGCACGAG...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GAAATGTCTGGAGAGGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAAGGAACAGTATAGATTaGCCGTCAATGGAAATAACA +
Preference number: 5 (lower is better)
Translates to: EMSGEADILIHSLYTGSSRNSID*PSMEIT
Trigger: TGTTATTTCCATTGACGGCAAATCTATACTGTTCCT...TGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCCTCTCCAGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp GGCAGACATTTTAATTCACTCGCTGTACACAGGGAGTTCAATCATCACATTTTCGATCGTTTCTTTCACTaGTTGGAAGAGAACTGCTGT +
Preference number: 5 (lower is better)
Translates to: GRHFNSLAVHREFNHHIFDRFFH*LEENCC
Trigger: ACAGCAGTTCTCTTCCAACAAGTGAAAGAAACGATC...GAAAATGTGATGATTGAACTCCCTGTGTACAGCGAGTGAATTAAAATGTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615645.4
CDS GCA 90 bp AATAACTATGCTTCCATCTTCACGACCACAAACAAGTCGTCCATGTaGTGGTATGTACACACTTGCAGTTACTTTAAGAGGTTCATTACT +
Preference number: 5 (lower is better)
Translates to: NNYASIFTTTNKSSM*WYVHTCSYFKRFIT
Trigger: AGTAATGAACCTCTTAAAGTAACTGCAAGTGTGTACATACCAGCACATGGACGACTTGTTTGTGGTCGTGAAGATGGAAGCATAGTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585754.1
CDS-3UTR CAA 90 bp TCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACAGTGACTTCCTGCCATTGTGTTaGTGTTTTCAAACCTGTCAC +
Preference number: 5 (lower is better)
Translates to: SELGSLSQKSLQEISYSDFLPLC*CFQTCH
Trigger: GTGACAGGTTTGAAAACACAAACACAATGGCAGGAA...GTCACTGTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TCACATTTTCATACAGGTGTCACGTCATGTCATCTTTTGCTTGTAAATTACCAAACATATGGCCTCCTCTaGACAAGAGGCCAAACGATA +
Preference number: 5 (lower is better)
Translates to: SHFHTGVTSCHLLLVNYQTYGLL*TRGQTI
Trigger: TATCGTTTGGCCTCTTGTCAAGAGGAGGCCATATGT...TTGGTAATTTACAAGCAAAAGATGACATGACGTGACACCTGTATGAAAATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS-3UTR CAA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACCTCACAATATACTGTTaGTCACTGGAAGCACAAGCT +
Preference number: 5 (lower is better)
Translates to: YASELGSLSQKSLQEISYLTIYC*SLEAQA
Trigger: AGCTTGTGCTTCCAGTGACAAACAGTATATTGTGAG...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp AGGCAACCAAACAACCCCTCACAAGTATATACAGATCAAGGTTTGTTAGAAACAGTTTGTCTTTATTGCTaGAACCATCAGGGAGTTATG +
Preference number: 5 (lower is better)
Translates to: RQPNNPSQVYTDQGLLETVCLYC*NHQGVM
Trigger: CATAACTCCCTGATGGTTCAAGCAATAAAGACAAAC...TGTTTCTAACAAACCTTGATCTGTATATACTTGTGAGGGGTTGTTTGGTTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACTCAAGGAGGTGTTCCTaGATGTTCTCTTTGATCGTT +
Preference number: 5 (lower is better)
Translates to: YASELGSLSQKSLQEISYSRRCS*MFSLIV
Trigger: AACGATCAAAGAGAACATCAAGGAACACCTCCTTGA...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS CCA 90 bp ATGCACAAAAAGAGATGCTTTGGCAATTCTGACAATAAATTGGTTTaGATTCCTCCTCAAATATTGGCTCAGTATCCTGCATGTCACTTA +
Preference number: 5 (lower is better)
Translates to: MHKKRCFGNSDNKLV*IPPQILAQYPACHL
Trigger: TAAGTGACATGCAGGATACTGAGCCAATATTTGAGGAGGAATCCAAACCAATTTATTGTCAGAATTGCCAAAGCATCTCTTTTTGTGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS CCA 90 bp TGTAAATGCACAAAAAGAGATGCTTTGGCAATTCTGACAATAAATTaGTTTGGATTCCTCCTCAAATATTGGCTCAGTATCCTGCATGTC +
Preference number: 5 (lower is better)
Translates to: CKCTKRDALAILTIN*FGFLLKYWLSILHV
Trigger: GACATGCAGGATACTGAGCCAATATTTGAGGAGGAATCCAAACCAATTTATTGTCAGAATTGCCAAAGCATCTCTTTTTGTGCATTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS-3UTR CAA 90 bp TATGCTTCTGAACTTGGCTCTTTATCACAAAAGTCCCTTCAAGAGATTAGTTACGGCTGGGAAACATTCTaGAAGACCTTTCTTTTTAAC +
Preference number: 5 (lower is better)
Translates to: YASELGSLSQKSLQEISYGWETF*KTFLFN
Trigger: GTTAAAAAGAAAGGTCTTCAAGAATGTTTCCCAGCC...GTAACTAATCTCTTGAAGGGACTTTTGTGATAAAGAGCCAAGTTCAGAAGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS TCA 72 bp GGGGCGGCAAGCGCTATACAGCCGCCGTCTCCCCAGTaGTACTGCAAGGTGCCGGTGCCGCCGCCGCCGCCA +
Preference number: 6 (lower is better)
Translates to: GAASAIQPPSPQ*YCKVPVPPPPP
Trigger: TGGCGGCGGCGGCGGCACCGGCACCTTGCAGTATCACTGGGGAGACGGCGGCTGTATAGCGCTTGCCGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
CDS GCA 72 bp GCGGGTGGTCTGGCGGTGGCAATGAGCGAGAGGGCATaGCTCGCAGAGCGGGCCGAGTCAGCTGCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: AGGLAVAMSERA*LAERAESAAGL
Trigger: GAGCCCAGCAGCTGACTCGGCCCGCTCTGCGAGGCATGCCCTCTCGCTCATTGCCACCGCCAGACCACCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000586124.2
ENST00000615645.4
CDS CAA 72 bp TTGGAAGTCCAGATGAGCCGGGCCAGCTTGAGGGCATaGTGGGAGCCGGGGGACGCGGGCTGCACAGGGGGC +
Preference number: 6 (lower is better)
Translates to: LEVQMSRASLRA*WEPGDAGCTGG
Trigger: GCCCCCTGTGCAGCCCGCGTCCCCCGGCTCCCACAATGCCCTCAAGCTGGCCCGGCTCATCTGGACTTCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS CAA 72 bp ACGTTGCGGTTGGAAGTCCAGATGAGCCGGGCCAGCTaGAGGGCATTGTGGGAGCCGGGGGACGCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: TLRLEVQMSRAS*RALWEPGDAGC
Trigger: GCAGCCCGCGTCCCCCGGCTCCCACAATGCCCTCAAGCTGGCCCGGCTCATCTGGACTTCCAACCGCAACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS CAA 90 bp ATGAGGATGACGTTGCGGTTGGAAGTCCAGATGAGCCGGGCCAGCTaGAGGGCATTGTGGGAGCCGGGGGACGCGGGCTGCACAGGGGGC +
Preference number: 6 (lower is better)
Translates to: MRMTLRLEVQMSRAS*RALWEPGDAGCTGG
Trigger: GCCCCCTGTGCAGCCCGCGTCCCCCGGCTCCCACAATGCCCTCAAGCTGGCCCGGCTCATCTGGACTTCCAACCGCAACGTCATCCTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS GCA 72 bp GTAACGGCGCCTACTTTTGGGCCCGACCTGCAGGCTTaGAGCCGCAGCGATCTGACAGCTAGCACCGCCCCC +
Preference number: 6 (lower is better)
Translates to: VTAPTFGPDLQA*SRSDLTASTAP
Trigger: GGGGGCGGTGCTAGCTGTCAGATCGCTGCGGCTGCAAGCCTGCAGGTCGGGCCCAAAAGTAGGCGCCGTTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593058.1
CDS CCA 72 bp GCTGGCCCCCACGCTCTTGGTAACGGCGCCTACTTTTaGGCCCGACCTGCAGGCTTGCAGCCGCAGCGATCT +
Preference number: 6 (lower is better)
Translates to: AGPHALGNGAYF*ARPAGLQPQRS
Trigger: AGATCGCTGCGGCTGCAAGCCTGCAGGTCGGGCCCAAAAGTAGGCGCCGTTACCAAGAGCGTGGGGGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593058.1
CDS CCA 72 bp GGATGCGGGGTGCGTAGATCCTGCTGGGATAATCCGTaGGGCGGCAAGCGCTATACAGCCGCCGTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: GCGVRRSCWDNP*GGKRYTAAVSP
Trigger: TGGGGAGACGGCGGCTGTATAGCGCTTGCCGCCCCACGGATTATCCCAGCAGGATCTACGCACCCCGCATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS GCA 72 bp GGGCGGAACTACGGAGGATGCGGGGTGCGTAGATCCTaGTGGGATAATCCGTGGGGCGGCAAGCGCTATACA +
Preference number: 6 (lower is better)
Translates to: GRNYGGCGVRRS*WDNPWGGKRYT
Trigger: TGTATAGCGCTTGCCGCCCCACGGATTATCCCAGCAGGATCTACGCACCCCGCATCCTCCGTAGTTCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS GCA 72 bp GCCTGCGCGGCTTCTCTCACCTCCAAGCATCGATCTTaGCATCTTCGGGCCAGCATCTCCAGAAGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: ACAASLTSKHRS*HLRASISRRGG
Trigger: GCCTCCCCTTCTGGAGATGCTGGCCCGAAGATGGCAAGATCGATGCTTGGAGGTGAGAGAAGCCGCGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000591524.1
ENST00000615645.4
CDS CCA 72 bp CGGAACTACGGAGGATGCGGGGTGCGTAGATCCTGCTaGGATAATCCGTGGGGCGGCAAGCGCTATACAGCC +
Preference number: 6 (lower is better)
Translates to: RNYGGCGVRRSC*DNPWGGKRYTA
Trigger: GGCTGTATAGCGCTTGCCGCCCCACGGATTATCCCAGCAGGATCTACGCACCCCGCATCCTCCGTAGTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS CAA 72 bp GGCCTGCGCGGCTTCTCTCACCTCCAAGCATCGATCTaGCCATCTTCGGGCCAGCATCTCCAGAAGGGGAGG +
Preference number: 6 (lower is better)
Translates to: GLRGFSHLQASI*PSSGQHLQKGR
Trigger: CCTCCCCTTCTGGAGATGCTGGCCCGAAGATGGCAAGATCGATGCTTGGAGGTGAGAGAAGCCGCGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000591524.1
ENST00000615645.4
CDS CAA 72 bp CGGTGCTCCTTCCCGTCATGGGCCATGAGGATGACGTaGCGGTTGGAAGTCCAGATGAGCCGGGCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: RCSFPSWAMRMT*RLEVQMSRASL
Trigger: CAAGCTGGCCCGGCTCATCTGGACTTCCAACCGCAACGTCATCCTCATGGCCCATGACGGGAAGGAGCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS CAA 90 bp AAGCGGTGCTCCTTCCCGTCATGGGCCATGAGGATGACGTTGCGGTaGGAAGTCCAGATGAGCCGGGCCAGCTTGAGGGCATTGTGGGAG +
Preference number: 6 (lower is better)
Translates to: KRCSFPSWAMRMTLR*EVQMSRASLRALWE
Trigger: CTCCCACAATGCCCTCAAGCTGGCCCGGCTCATCTGGACTTCCAACCGCAACGTCATCCTCATGGCCCATGACGGGAAGGAGCACCGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS CAA 90 bp ACCATGAAGCGGTGCTCCTTCCCGTCATGGGCCATGAGGATGACGTaGCGGTTGGAAGTCCAGATGAGCCGGGCCAGCTTGAGGGCATTG +
Preference number: 6 (lower is better)
Translates to: TMKRCSFPSWAMRMT*RLEVQMSRASLRAL
Trigger: CAATGCCCTCAAGCTGGCCCGGCTCATCTGGACTTCCAACCGCAACGTCATCCTCATGGCCCATGACGGGAAGGAGCACCGCTTCATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS GCA 72 bp CCAAGGAGGACAAGGATAGGGCGGAACTACGGAGGATaGGGGGTGCGTAGATCCTGCTGGGATAATCCGTGG +
Preference number: 6 (lower is better)
Translates to: PRRTRIGRNYGG*GVRRSCWDNPW
Trigger: CCACGGATTATCCCAGCAGGATCTACGCACCCCGCATCCTCCGTAGTTCCGCCCTATCCTTGTCCTCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000589935.1
ENST00000615645.4
CDS CCA 72 bp GTGTACCTCTTTGGCTATGGTGGTGATGAAGGCGGGTaGTCTGGCGGTGGCAATGAGCGAGAGGGCATGCCT +
Preference number: 6 (lower is better)
Translates to: VYLFGYGGDEGG*SGGGNEREGMP
Trigger: AGGCATGCCCTCTCGCTCATTGCCACCGCCAGACCACCCGCCTTCATCACCACCATAGCCAAAGAGGTACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000586124.2
ENST00000615645.4
CDS GCA 72 bp AGCAGTGACGTGTTCATCTGTCACAGCTTCATCTCATaGCGCGATGTAGCCTATCAGACCGCCGGTGGGCGC +
Preference number: 6 (lower is better)
Translates to: SSDVFICHSFIS*RDVAYQTAGGR
Trigger: GCGCCCACCGGCGGTCTGATAGGCTACATCGCGGCATGAGATGAAGCTGTGACAGATGAACACGTCACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589935.1
CDS GCA 72 bp TGCAGCGCAGCTGAGGTGCCGAGTTCAGCATGCCGATaGTTCCCAGCAGTGACGTGTTCATCTGTCACAGCT +
Preference number: 6 (lower is better)
Translates to: CSAAEVPSSACR*FPAVTCSSVTA
Trigger: AGCTGTGACAGATGAACACGTCACTGCTGGGAAGCATCGGCATGCTGAACTCGGCACCTCAGCTGCGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589935.1
CDS CCA 72 bp GGAAGTTGGAGGGGAACCCCTTGCCTTAGAAAGGTCTaGGGTGCTTGGTCTAGGTGGCCTGGTAGGACCCTT +
Preference number: 6 (lower is better)
Translates to: GSWRGTPCLRKV*GAWSRWPGRTL
Trigger: AAGGGTCCTACCAGGCCACCTAGACCAAGCACCCCAGACCTTTCTAAGGCAAGGGGTTCCCCTCCAACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000591524.1
ENST00000615645.4
CDS GCA 72 bp TGCAGCGCAGCTGAGGTGCCGAGTTCAGCATGCCGATaGTTCCCAGCAGTGACGTGTTCATCTGCCAAAAAG +
Preference number: 6 (lower is better)
Translates to: CSAAEVPSSACR*FPAVTCSSAKK
Trigger: CTTTTTGGCAGATGAACACGTCACTGCTGGGAAGCATCGGCATGCTGAACTCGGCACCTCAGCTGCGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS TCA 72 bp AGGTGCCGAGTTCAGCATGCCGATGCTTCCCAGCAGTaGCGTGTTCATCTGTCACAGCTTCATCTCATGCCG +
Preference number: 6 (lower is better)
Translates to: RCRVQHADASQQ*RVHLSQLHLMP
Trigger: CGGCATGAGATGAAGCTGTGACAGATGAACACGTCACTGCTGGGAAGCATCGGCATGCTGAACTCGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589935.1
CDS GCA 72 bp TATGGCCTCCTCTTGACAAGAGGCCAAACGATACGGTaGAGTGGGGTTTCAGCATTCCAAGGCGATCCAGGC +
Preference number: 6 (lower is better)
Translates to: YGLLLTRGQTIR*SGVSAFQGDPG
Trigger: GCCTGGATCGCCTTGGAATGCTGAAACCCCACTGCACCGTATCGTTTGGCCTCTTGTCAAGAGGAGGCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS GCA 72 bp TGTTTGTGTTTTCAAACCTGTCACAGCTTCATCTCATaGCGCGATGTAGCCTATCAGACCGCCGGTGGGCGC +
Preference number: 6 (lower is better)
Translates to: CLCFQTCHSFIS*RDVAYQTAGGR
Trigger: GCGCCCACCGGCGGTCTGATAGGCTACATCGCGGCATGAGATGAAGCTGTGACAGGTTTGAAAACACAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS CCA 72 bp CCTCCTCTTGACAAGAGGCCAAACGATACGGTGCAGTaGGGTTTCAGCATTCCAAGGCGATCCAGGCAAACT +
Preference number: 6 (lower is better)
Translates to: PPLDKRPNDTVQ*GFSIPRRSRQT
Trigger: AGTTTGCCTGGATCGCCTTGGAATGCTGAAACCCCACTGCACCGTATCGTTTGGCCTCTTGTCAAGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS TCA 72 bp AGGTGCCGAGTTCAGCATGCCGATGCTTCCCAGCAGTaGCGTGTTCATCTGCCAAAAAGAAATGTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: RCRVQHADASQQ*RVHLPKRNVAV
Trigger: GACAGCCACATTTCTTTTTGGCAGATGAACACGTCACTGCTGGGAAGCATCGGCATGCTGAACTCGGCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS GCA 72 bp GTAAGTAAGGAGCCCAGGCATCAATGGCTTCCTTCCTaGCTGCCTGCTCAATTCTTCTCAGTTCCGCCAGAA +
Preference number: 6 (lower is better)
Translates to: VSKEPRHQWLPS*LPAQFFSVPPE
Trigger: TTCTGGCGGAACTGAGAAGAATTGAGCAGGCAGGCAGGAAGGAAGCCATTGATGCCTGGGCTCCTTACTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000591524.1
ENST00000615645.4
CDS CAA 72 bp TATAACCCGGCAGCATCAGTGACATATGGCCTCCTCTaGACAAGAGGCCAAACGATACGGTGCAGTGGGGTT +
Preference number: 6 (lower is better)
Translates to: YNPAASVTYGLL*TRGQTIRCSGV
Trigger: AACCCCACTGCACCGTATCGTTTGGCCTCTTGTCAAGAGGAGGCCATATGTCACTGATGCTGCCGGGTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS CAA 90 bp CAGGCTGATTATAACCCGGCAGCATCAGTGACATATGGCCTCCTCTaGACAAGAGGCCAAACGATACGGTGCAGTGGGGTTTCAGCATTC +
Preference number: 6 (lower is better)
Translates to: QADYNPAASVTYGLL*TRGQTIRCSGVSAF
Trigger: GAATGCTGAAACCCCACTGCACCGTATCGTTTGGCCTCTTGTCAAGAGGAGGCCATATGTCACTGATGCTGCCGGGTTATAATCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS CAA 90 bp ATCAGATCAATGGCTGTTCTTCGGATAGTGCTGTGTGGAGGAAGTTaGGGGCTTGGAGGCTGTAGCAGAAGAAACGTCAGTGCCTTGCAA +
Preference number: 6 (lower is better)
Translates to: IRSMAVLRIVLCGGS*GLGGCSRRNVSALQ
Trigger: TTGCAAGGCACTGACGTTTCTTCTGCTACAGCCTCCAAGCCCCAAACTTCCTCCACACAGCACTATCCGAAGAACAGCCATTGATCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS TCA 72 bp CGCTGGCAGCTTCCTTCCTACTTCTGTTTTCCCATGTaGCAGTTTACAAGCAGGCTGATTATAACCCGGCAG +
Preference number: 6 (lower is better)
Translates to: RWQLPSYFCFPM*QFTSRLIITRQ
Trigger: CTGCCGGGTTATAATCAGCCTGCTTGTAAACTGTCACATGGGAAAACAGAAGTAGGAAGGAAGCTGCCAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS GCA 72 bp GAAGTCCTACTGAGTGGTCACTGGCTACAGAGCAGATaGAGTGCTGTACTCTTGCACTACAGTTTTCAGGTG +
Preference number: 6 (lower is better)
Translates to: EVLLSGHWLQSR*SAVLLHYSFQV
Trigger: CACCTGAAAACTGTAGTGCAAGAGTACAGCACTGCATCTGCTCTGTAGCCAGTGACCACTCAGTAGGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS CCA 72 bp TCTCTCGCAAACTTAGAAGTCCTACTGAGTGGTCACTaGCTACAGAGCAGATGCAGTGCTGTACTCTTGCAC +
Preference number: 6 (lower is better)
Translates to: SLANLEVLLSGH*LQSRCSAVLLH
Trigger: GTGCAAGAGTACAGCACTGCATCTGCTCTGTAGCCAGTGACCACTCAGTAGGACTTCTAAGTTTGCGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS TCA 72 bp ACCGAGCTGAGACCTGATGAGGATATAGCAAACATGTaGCTTTGTTCCGATGACCACGGAGTGTTCTGTGAG +
Preference number: 6 (lower is better)
Translates to: TELRPDEDIANM*LCSDDHGVFCE
Trigger: CTCACAGAACACTCCGTGGTCATCGGAACAAAGTCACATGTTTGCTATATCCTCATCAGGTCTCAGCTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585754.1
CDS CCA 72 bp GACATATTTGTCCGTCGTGACATCCTGTTACGATCGTaGCCCCATCATCTGTTAAAAGTACGGCTGAGATGC +
Preference number: 6 (lower is better)
Translates to: DIFVRRDILLRS*PHHLLKVRLRC
Trigger: GCATCTCAGCCGTACTTTTAACAGATGATGGGGCCACGATCGTAACAGGATGTCACGACGGACAAATATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000593058.1
ENST00000615645.4
CDS CCA 72 bp GATCCACCACTAGTCAACCCGAATCCCTCAGGAATTTaGCTAGAGCTTCGAGGTCTGGTCAATAGTTTAGGA +
Preference number: 6 (lower is better)
Translates to: DPPLVNPNPSGI*LELRGLVNSLG
Trigger: TCCTAAACTATTGACCAGACCTCGAAGCTCTAGCCAAATTCCTGAGGGATTCGGGTTGACTAGTGGTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS TCA 72 bp TCTACTGAAAGATCCCAGAGACATATTTGTCCGTCGTaGCATCCTGTTACGATCGTGGCCCCATCATCTGTT +
Preference number: 6 (lower is better)
Translates to: STERSQRHICPS*HPVTIVAPSSV
Trigger: AACAGATGATGGGGCCACGATCGTAACAGGATGTCACGACGGACAAATATGTCTCTGGGATCTTTCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000593058.1
ENST00000615645.4
CDS TCA 72 bp AGCTCGTGCAAGAGTTGTTGTGTGCATATTCTGCTGTaGTTGGGTATTTGCTGCAAGAGCCGTATGTCTGTG +
Preference number: 6 (lower is better)
Translates to: SSCKSCCVHILL*LGICCKSRMSV
Trigger: CACAGACATACGGCTCTTGCAGCAAATACCCAATCACAGCAGAATATGCACACAACAACTCTTGCACGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000586124.2
ENST00000591449.1
ENST00000615645.4
CDS TCA 72 bp GCACATCAACAGCTCCACAGAAACCACCTAGGTCAGTaGCCCACCTTTAATAACTTCGTAAGAGGGAAGCAA +
Preference number: 6 (lower is better)
Translates to: AHQQLHRNHLGQ*PTFNNFVRGKQ
Trigger: TTGCTTCCCTCTTACGAAGTTATTAAAGGTGGGTCACTGACCTAGGTGGTTTCTGTGGAGCTGTTGATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585824.1
ENST00000587403.5
CDS CAA 72 bp GGAAACGACAGGTGCAGCAACTTGTTTAATCTGTCCTaGCACAATATTACTGGAAGTTGGAGGGGAACCCCT +
Preference number: 6 (lower is better)
Translates to: GNDRCSNLFNLS*HNITGSWRGTP
Trigger: AGGGGTTCCCCTCCAACTTCCAGTAATATTGTGCAAGGACAGATTAAACAAGTTGCTGCACCTGTCGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000615645.4
CDS CAA 72 bp CAATGGGTAGAACAAGGCTGTTTCCTGCCATTGTGTTaGTGTTTTCAAACCAGGCAAGGGAGCCACAAAGAC +
Preference number: 6 (lower is better)
Translates to: QWVEQGCFLPLC*CFQTRQGSHKD
Trigger: GTCTTTGTGGCTCCCTTGCCTGGTTTGAAAACACAAACACAATGGCAGGAAACAGCCTTGTTCTACCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593058.1
CDS TCA 72 bp CAAACTTCATCCAGTACTTCATTCAAACCCCAGGCGTaGAGGCAGGACATAAACAGCTTTGCAGTGTCCATA +
Preference number: 6 (lower is better)
Translates to: QTSSSTSFKPQA*RQDINSFAVSI
Trigger: TATGGACACTGCAAAGCTGTTTATGTCCTGCCTTCACGCCTGGGGTTTGAATGAAGTACTGGATGAAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS GCA 72 bp CCTTTAGCTCGTGCAAGAGTTGTTGTGTGCATATTCTaGTGTGATTGGGTATTTGCTGCAAGAGCCGTATGT +
Preference number: 6 (lower is better)
Translates to: PLARARVVVCIF*CDWVFAARAVC
Trigger: ACATACGGCTCTTGCAGCAAATACCCAATCACAGCAGAATATGCACACAACAACTCTTGCACGAGCTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000586124.2
ENST00000591449.1
ENST00000615645.4
CDS CAA 72 bp AAAGAACAATGGGTAGAACAAGGCTGTTTCCTGCCATaGTGTTTGTGTTTTCAAACCAGGCAAGGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: KEQWVEQGCFLP*CLCFQTRQGSH
Trigger: GTGGCTCCCTTGCCTGGTTTGAAAACACAAACACAATGGCAGGAAACAGCCTTGTTCTACCCATTGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593058.1
CDS TCA 72 bp GCAGTATTCGGCCTAGAGGCTTCTTCAGTCAGGAGTTaGATAATCAACGCTTCCACATCAAAGAATAGCACA +
Preference number: 6 (lower is better)
Translates to: AVFGLEASSVRS*IINASTSKNST
Trigger: TGTGCTATTCTTTGATGTGGAAGCGTTGATTATTCAACTCCTGACTGAAGAAGCCTCTAGGCCGAATACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000590557.5
CDS TCA 72 bp AGCTTTGTAGAGAAGCATGAGAACTCTTACGTGATATaGCGTGGTCTATGTACTGAGGTAAGTAAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: SFVEKHENSYVI*RGLCTEVSKEP
Trigger: GGGCTCCTTACTTACCTCAGTACATAGACCACGTCATATCACGTAAGAGTTCTCATGCTTCTCTACAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591524.1
CDS TCA 72 bp TCACACAACGATCCAATGCACTGGGAATATGAAATGTaGAGAACGAGACGGTTGATCCCAGAAGCACATCAA +
Preference number: 6 (lower is better)
Translates to: SHNDPMHWEYEM*RTRRLIPEAHQ
Trigger: TTGATGTGCTTCTGGGATCAACCGTCTCGTTCTTCACATTTCATATTCCCAGTGCATTGGATCGTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587403.5
CDS TCA 72 bp TCACACAACGATCCAATGCACCTTGTCAAAGGCCTGTaGGAATGGCACTGCATACTTACTGGGAATATGAAA +
Preference number: 6 (lower is better)
Translates to: SHNDPMHLVKGL*EWHCILTGNMK
Trigger: TTTCATATTCCCAGTAAGTATGCAGTGCCATTCTCACAGGCCTTTGACAAGGTGCATTGGATCGTTGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585824.1
CDS CCA 72 bp TCGAACAAGCTGGCATCCATAAGCATAATAATGCAATaGGCGGAGGCACATGTTAGTACTAGAGTAGGATGT +
Preference number: 6 (lower is better)
Translates to: SNKLASISIIMQ*AEAHVSTRVGC
Trigger: ACATCCTACTCTAGTACTAACATGTGCCTCCGCCCATTGCATTATTATGCTTATGGATGCCAGCTTGTTCGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591524.1
CDS CAA 72 bp CAATGGGTAGAACAAGGCTGTTTCCTGCCATTGTGTTaGTGTTTTCAAACCTGTCACAGCTTCATCTCATGC +
Preference number: 6 (lower is better)
Translates to: QWVEQGCFLPLC*CFQTCHSFISC
Trigger: GCATGAGATGAAGCTGTGACAGGTTTGAAAACACAAACACAATGGCAGGAAACAGCCTTGTTCTACCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000615645.4
CDS TCA 72 bp GAAGCCAAGAGGTTAGTTGCAAGGGTTTGTAGCTTATaGTGGGCCATATTTTTAAGAGCAGCAAGACTACGT +
Preference number: 6 (lower is better)
Translates to: EAKRLVARVCSL*WAIFLRAARLR
Trigger: ACGTAGTCTTGCTGCTCTTAAAAATATGGCCCATCATAAGCTACAAACCCTTGCAACTAACCTCTTGGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000587403.5
ENST00000590557.5
CDS TCA 72 bp AGAATGGCACTGCATACTTACTGGGAATATGAAATGTaGAGAACGAGACGGTTGATCCCAGAAGCACATCAA +
Preference number: 6 (lower is better)
Translates to: RMALHTYWEYEM*RTRRLIPEAHQ
Trigger: TTGATGTGCTTCTGGGATCAACCGTCTCGTTCTTCACATTTCATATTCCCAGTAAGTATGCAGTGCCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585824.1
CDS CAA 72 bp TCCAGCAGGACAAGGATTCAGTTTATCAAATGCCTCTaGCAAACTAATAGAAGTTGTCATTGCCAGCCCTTC +
Preference number: 6 (lower is better)
Translates to: SSRTRIQFIKCL*QTNRSCHCQPF
Trigger: GAAGGGCTGGCAATGACAACTTCTATTAGTTTGCAAGAGGCATTTGATAAACTGAATCCTTGTCCTGCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585754.1
CDS CAA 72 bp TCCTCATCCTCCTCTTCATCATCAAGGAGGTGTTCCTaGATGTTCTCTTTGATCGTTTCTTTCACTTGTTGG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSRRCS*MFSLIVSFTCW
Trigger: CCAACAAGTGAAAGAAACGATCAAAGAGAACATCAAGGAACACCTCCTTGATGATGAAGAGGAGGATGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS CAA 90 bp CAGAGGCACATCTCTCCACTTTCAGATGCACTCACAATATACTGTTaGTCACTGGAAGCACAAGCTTTAGACAAACAAGTGATTGATGCT +
Preference number: 6 (lower is better)
Translates to: QRHISPLSDALTIYC*SLEAQALDKQVIDA
Trigger: AGCATCAATCACTTGTTTGTCTAAAGCTTGTGCTTCCAGTGACAAACAGTATATTGTGAGTGCATCTGAAAGTGGAGAGATGTGCCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000593058.1
CDS CAA 90 bp TCATCCTCCTCTTCATCATCAAGGAGGTGTTCCTTGATGTTCTCTTaGATCGTTTCTTTCACTTGTTGGAAGAGAACTGCTGCTCGTTTT +
Preference number: 6 (lower is better)
Translates to: SSSSSSSRRCSLMFS*IVSFTCWKRTAARF
Trigger: AAAACGAGCAGCAGTTCTCTTCCAACAAGTGAAAGAAACGATCAAAGAGAACATCAAGGAACACCTCCTTGATGATGAAGAGGAGGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
CDS TCA 72 bp CAGCCCTTCTTCACTTCCCTGTTTATCAGCTGTGTCTaGTATGTTCCAAATATTCAACCTTCCAGAAGAATC +
Preference number: 6 (lower is better)
Translates to: QPFFTSLFISCV*YVPNIQPSRRI
Trigger: GATTCTTCTGGAAGGTTGAATATTTGGAACATATCAGACACAGCTGATAAACAGGGAAGTGAAGAAGGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585754.1
CDS GCA 72 bp AAAATTTCCCCTTTAGCTCGTGCAAGAGTTGTTGTGTaGATATTCTGCTGTGATTGGGTATTTGCTGCAAGA +
Preference number: 6 (lower is better)
Translates to: KISPLARARVVV*IFCCDWVFAAR
Trigger: TCTTGCAGCAAATACCCAATCACAGCAGAATATGCACACAACAACTCTTGCACGAGCTAAAGGGGAAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000586124.2
ENST00000591449.1
ENST00000615645.4
CDS CAA 90 bp CTCATTATCTCCTCATCCTCCTCTTCATCATCAAGGAGGTGTTCCTaGATGTTCTCTTTGATCGTTTCTTTCACTTGTTGGAAGAGAACT +
Preference number: 6 (lower is better)
Translates to: LIISSSSSSSSRRCS*MFSLIVSFTCWKRT
Trigger: AGTTCTCTTCCAACAAGTGAAAGAAACGATCAAAGAGAACATCAAGGAACACCTCCTTGATGATGAAGAGGAGGATGAGGAGATAATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS CAA 90 bp ATCTATAATTCCAGCAGGACAAGGATTCAGTTTATCAAATGCCTCTaGCAAACTAATAGAAGTTGTCATTGCCAGCCCTTCTTCACTTCC +
Preference number: 6 (lower is better)
Translates to: IYNSSRTRIQFIKCL*QTNRSCHCQPFFTS
Trigger: GGAAGTGAAGAAGGGCTGGCAATGACAACTTCTATTAGTTTGCAAGAGGCATTTGATAAACTGAATCCTTGTCCTGCTGGAATTATAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585754.1
CDS CAA 90 bp GTGTCCATAGTTAAATTATATTCTAATAGGGTCAATGGCTTTGATTaGCTGGACCGATATTCAGGATCACTTTCTTCCCTTCTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: VSIVKLYSNRVNGFD*LDRYSGSLSSLLCL
Trigger: GAGGCAGAGAAGGGAAGAAAGTGATCCTGAATATCGGTCCAGCAAATCAAAGCCATTGACCCTATTAGAATATAATTTAACTATGGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS GCA 72 bp GGATTCACAATCCCAACTTTAACTAGCAAGAGAGTTTaGCTTGTATCTGCACTTGCATATCATCAGATCCAT +
Preference number: 6 (lower is better)
Translates to: GFTIPTLTSKRV*LVSALAYHQIH
Trigger: ATGGATCTGATGATATGCAAGTGCAGATACAAGGCAAACTCTCTTGCTAGTTAAAGTTGGGATTGTGAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591524.1
CDS CAA 72 bp ATCTCTCCACTTTCAGATGCACTCACAATATACTGTTaGTCACTGGAAGCACAAGCTTTAGACAAACAAGTG +
Preference number: 6 (lower is better)
Translates to: ISPLSDALTIYC*SLEAQALDKQV
Trigger: CACTTGTTTGTCTAAAGCTTGTGCTTCCAGTGACAAACAGTATATTGTGAGTGCATCTGAAAGTGGAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000593058.1
CDS CAA 72 bp CACCAGGTAATCATCAGAAGGCCTCCATTTGATTACTaGAATAGGAAAAAGGTGACGAGATGCCAACATTAT +
Preference number: 6 (lower is better)
Translates to: HQVIIRRPPFDY*NRKKVTRCQHY
Trigger: ATAATGTTGGCATCTCGTCACCTTTTTCCTATTCAAGTAATCAAATGGAGGCCTTCTGATGATTACCTGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254442.8
ENST00000357574.7
CDS TCA 72 bp TTTCTACATATTCCTGCAAAGCTTTGTAGAGAAGCATaGGAACTCTTACGTGATATGACGTGGTCTATGTAC +
Preference number: 6 (lower is better)
Translates to: FLHIPAKLCREA*ELLRDMTWSMY
Trigger: GTACATAGACCACGTCATATCACGTAAGAGTTCTCATGCTTCTCTACAAAGCTTTGCAGGAATATGTAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591524.1
CDS TCA 72 bp TTAAGAGGTTCATTACTATTGGGAATCACACTCAGCTaGTCTATAATTCCAGCAGGACAAGGATTCAGTTTA +
Preference number: 6 (lower is better)
Translates to: LRGSLLLGITLS*SIIPAGQGFSL
Trigger: TAAACTGAATCCTTGTCCTGCTGGAATTATAGATCAGCTGAGTGTGATTCCCAATAGTAATGAACCTCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585754.1
CDS CCA 72 bp AATTATATTCTAATAGGGTCAATGGCTTTGATTTGCTaGACCGATATTCAGGATCACTTTCTTCCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: NYILIGSMALIC*TDIQDHFLPFS
Trigger: AGAGAAGGGAAGAAAGTGATCCTGAATATCGGTCCAGCAAATCAAAGCCATTGACCCTATTAGAATATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS CAA 72 bp GTTAAATTATATTCTAATAGGGTCAATGGCTTTGATTaGCTGGACCGATATTCAGGATCACTTTCTTCCCTT +
Preference number: 6 (lower is better)
Translates to: VKLYSNRVNGFD*LDRYSGSLSSL
Trigger: AAGGGAAGAAAGTGATCCTGAATATCGGTCCAGCAAATCAAAGCCATTGACCCTATTAGAATATAATTTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585824.1
ENST00000615645.4
CDS TCA 72 bp ATGTTCCAAATATTCAACCTTCCAGAAGAATCACCCTaGATTAACAGTTTATGGAAATATTCTCTGCATCCA +
Preference number: 6 (lower is better)
Translates to: MFQIFNLPEESP*INSLWKYSLHP
Trigger: TGGATGCAGAGAATATTTCCATAAACTGTTAATTCAGGGTGATTCTTCTGGAAGGTTGAATATTTGGAACAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254442.8
ENST00000357574.7
ENST00000585754.1