RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR55 (Homo sapiens)

Ensembl gene IDs: ENSG00000120314

Ensembl transcript IDs: ENST00000358337.10, ENST00000358337.9, ENST00000504897.2, ENST00000506393.5, ENST00000511232.5, ENST00000520764.1

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCCCGCGCGCTGGGTCCGTGGGCTCAGAATTCGAAAGCGTCGCCTaGCGGTGGCCTTGCATACCCTCTTCCCACAGGCTGGGTGGGCAG +
Preference number: 1 (lower is better)
Translates to: PPRAGSVGSEFESVA*RWPCIPSSHRLGGQ
Trigger: CTGCCCACCCAGCCTGTGGGAAGAGGGTATGCAAGGCCACCGTCAGGCGACGCTTTCGAATTCTGAGCCCACGGACCCAGCGCGCGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CCA 90 bp TTGAGGCGCTGGTCATGGCCACTACTGGCCAGGAAGCGGCCACAGTaGGAGAGGGCCAGCTCCTCCACAGGCTCCCCAGTGTGCTGGCCC +
Preference number: 1 (lower is better)
Translates to: LRRWSWPLLARKRPQ*ERASSSTGSPVCWP
Trigger: GGGCCAGCACACTGGGGAGCCTGTGGAGGAGCTGGCCCTCTCCCACTGTGGCCGCTTCCTGGCCAGTAGTGGCCATGACCAGCGCCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR GCA 90 bp CGGCCACAGTGGGAGAGGGCCAGCTCCTCCACAGGCTCCCCAGTGTaGTGGCCCACACTGCCCACCACTCGGTTCGGTAGGATGTTCACA +
Preference number: 1 (lower is better)
Translates to: RPQWERASSSTGSPV*WPTLPTTRFGRMFT
Trigger: TGTGAACATCCTACCGAACCGAGTGGTGGGCAGTGTGGGCCAGCACACTGGGGAGCCTGTGGAGGAGCTGGCCCTCTCCCACTGTGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR CCA 90 bp ACTTGTGACCCTGAGGTTCTTGTCTCCAGCGTCCACCCTGCGGCTTaGGAGCTCCTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGC +
Preference number: 1 (lower is better)
Translates to: TCDPEVLVSSVHPAA*ELLLGRQPPYIRTR
Trigger: GCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAGGAGCTCCCAAGCCGCAGGGTGGACGCTGGAGACAAGAACCTCAGGGTCACAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR TCA 90 bp AGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTTCACCTaGAGGTCTGAGCGAAGCCCGGGCGGCGCACGTGCAGTGGATACC +
Preference number: 1 (lower is better)
Translates to: RQPPYIRTRDFAAFT*RSERSPGGARAVDT
Trigger: GGTATCCACTGCACGTGCGCCGCCCGGGCTTCGCTCAGACCTTCAGGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CCA 90 bp ACAGCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGGTCATaGCCACTACTGGCCAGGAAGCGGCCACAGTGGGAGAGGGCCAGC +
Preference number: 1 (lower is better)
Translates to: TARSWAMSQNLRRWS*PLLARKRPQWERAS
Trigger: GCTGGCCCTCTCCCACTGTGGCCGCTTCCTGGCCAGTAGTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR CCA 90 bp CAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCTGGGTCCGTaGGCTCAGAATTCGAAAGCGTCGCCTGACGGTGGCCTTGCATAC +
Preference number: 1 (lower is better)
Translates to: QTFVHIASHPRALGP*AQNSKASPDGGLAY
Trigger: GTATGCAAGGCCACCGTCAGGCGACGCTTTCGAATTCTGAGCCCACGGACCCAGCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CCA 90 bp CCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCTaGGTCCGTGGGCTCAGAATTCGAAAGCGTCGCCTGACGGTGGCC +
Preference number: 1 (lower is better)
Translates to: PFHRPLFTSPPTPAR*VRGLRIRKRRLTVA
Trigger: GGCCACCGTCAGGCGACGCTTTCGAATTCTGAGCCCACGGACCCAGCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CCA 90 bp ACCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTaGTCATGGCCACTACTGGCCAGGAAGCGGCCACAGTGGGAGAGG +
Preference number: 1 (lower is better)
Translates to: TTTARSWAMSQNLRR*SWPLLARKRPQWER
Trigger: CCTCTCCCACTGTGGCCGCTTCCTGGCCAGTAGTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR TCA 90 bp AGTCATCCACCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTTaGGGCGCTGGTCATGGCCACTACTGGCCAGGAAGCGGCCACAGT +
Preference number: 1 (lower is better)
Translates to: SHPPPQLAAGPCPKT*GAGHGHYWPGSGHS
Trigger: ACTGTGGCCGCTTCCTGGCCAGTAGTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGGTGGATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR CCA 90 bp GATGACTCCATCAGTGGAGCCAGTACACAGCAGACTCTCGGTGACTaGAACCATGCAGTCGATAGATTCAGCTCTCAGGGCAAAGCGGTC +
Preference number: 1 (lower is better)
Translates to: DDSISGASTQQTLGD*NHAVDRFSSQGKAV
Trigger: GACCGCTTTGCCCTGAGAGCTGAATCTATCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGTGTACTGGCTCCACTGATGGAGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR TCA 90 bp CTCTCAGGGCAAAGCGGTCACTTGTGGCCCCAAAGCCATTCCAATTaGAGAGGTAGATGGTACCTTCACTGGAGCCACAGGCTACCTTCT +
Preference number: 1 (lower is better)
Translates to: LSGQSGHLWPQSHSN*RGRWYLHWSHRLPS
Trigger: AGAAGGTAGCCTGTGGCTCCAGTGAAGGTACCATCTACCTCTTCAATTGGAATGGCTTTGGGGCCACAAGTGACCGCTTTGCCCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR GCA 90 bp TCTTGCCCTAGCTTAGAGTTTGTTTACACTGGTAGAGTGAATAGCTaGTACGGGGCAAGTACTTCCTCACATCAGTGCTTTGAGTGCATC +
Preference number: 1 (lower is better)
Translates to: SCPSLEFVYTGRVNS*YGASTSSHQCFECI
Trigger: GATGCACTCAAAGCACTGATGTGAGGAAGTACTTGCCCCGTAGCAGCTATTCACTCTACCAGTGTAAACAAACTCTAAGCTAGGGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR TCA 90 bp TGTAAGGTAGCAGTGTGTTATACTCCCTTTGCAAATAATGGAGGCTaGAGGCTTCATTGTCTTTTCTTACCCATGGTCACACTACCAGGA +
Preference number: 1 (lower is better)
Translates to: CKVAVCYTPFANNGG*RLHCLFLPMVTLPG
Trigger: TCCTGGTAGTGTGACCATGGGTAAGAAAAGACAATGAAGCCTTCAGCCTCCATTATTTGCAAAGGGAGTATAACACACTGCTACCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
3UTR CCA 90 bp TTGCAAATAATGGAGGCTGAAGGCTTCATTGTCTTTTCTTACCCATaGTCACACTACCAGGAAATGGGAAGGCTACAAATAACAGGACTG +
Preference number: 1 (lower is better)
Translates to: LQIMEAEGFIVFSYP*SHYQEMGRLQITGL
Trigger: CAGTCCTGTTATTTGTAGCCTTCCCATTTCCTGGTAGTGTGACCATGGGTAAGAAAAGACAATGAAGCCTTCAGCCTCCATTATTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
3UTR-3UTR GCA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCCCGCCATCGCCACGCTaGACAACCATCCGCTGCGGC +
Preference number: 2 (lower is better)
Translates to: ATPRYGSPSPSACPATPAPPSPR*TTIRCG
Trigger: GCCGCAGCGGATGGTTGTGCAGCGTGGCGATGGCGG...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR CCA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCTGGTGGAAGGTAGGCTaGGGCGGGGGTGCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: ATPRYGSPSPSACPATPAWWKVG*GGGAGW
Trigger: CCAACCAGCACCCCCGCCCCAGCCTACCTTCCACCA...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR CCA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCGCAAAGGAGGAACTGTaGCTCCACGTCCACCCGCCC +
Preference number: 2 (lower is better)
Translates to: ATPRYGSPSPSACPATPAAKEEL*LHVHPP
Trigger: GGGCGGGTGGACGTGGAGCCACAGTTCCTCCTTTGC...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR GCA 90 bp AGCTCCTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTCCCGGGCGGCGCACGTaGAGTGGATACCTCCACCCC +
Preference number: 2 (lower is better)
Translates to: SSSSGGSPRTYAPATLQLPGRRT*SGYLHP
Trigger: GGGGTGGAGGTATCCACTGCACGTGCGCCGCCCGGG...AAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR CCA 90 bp CTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTTCACCTCGCGCTGCAGCCGCTaGGTCCCGGCTTGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: LLGRQPPYIRTRDFAAFTSRCSR*VPACRR
Trigger: CCTCCTGCAAGCCGGGACCCAGCGGCTGCAGCGCGA...GGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CAA 90 bp AGCTCCTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTaGCAGCTTTCACCTGAAGGTCTGAGCGAAGCCCGGGCGGCGCAC +
Preference number: 2 (lower is better)
Translates to: SSSSGGSPRTYAPAT*QLSPEGLSEARAAH
Trigger: GTGCGCCGCCCGGGCTTCGCTCAGACCTTCAGGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR GCA 90 bp GGTGTAAACCCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCCGCTGCTGCTCGCGCTaGAGCCGCTGGGTCCCGGCT +
Preference number: 2 (lower is better)
Translates to: GVNPFHRPLFTSPPTPARRCCSR*SRWVPA
Trigger: AGCCGGGACCCAGCGGCTGCAGCGCGAGCAGCAGCG...GCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGGGTTTACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR TCA 90 bp GCTCAGAATTCGAAAGCGTCGCCTGACGGTGGCCTTGCATACCCTCTTCCCACAGCCTGCCGCCGAATCTaGCCCGCAGCGCGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: AQNSKASPDGGLAYPLPTACRRI*PAARCC
Trigger: GCAGCAGCGCGCTGCGGGTCAGATTCGGCGGCAGGC...TGTGGGAAGAGGGTATGCAAGGCCACCGTCAGGCGACGCTTTCGAATTCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR CCA 90 bp AGCTCCTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTCGCGCGCTGGGTCCGTaGGCTCAGAATTCGAAAGCG +
Preference number: 2 (lower is better)
Translates to: SSSSGGSPRTYAPATLQLRALGP*AQNSKA
Trigger: CGCTTTCGAATTCTGAGCCCACGGACCCAGCGCGCG...AAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR CCA 90 bp CTTGTGACCCTGAGGTTCTTGTCTCCAGCGTCCACCCTGCGGCTTGGGAGCTCCGTACCACAGGAGAGGTaGGGGCGCGCTTGGCGATCC +
Preference number: 2 (lower is better)
Translates to: LVTLRFLSPASTLRLGSSVPQER*GRAWRS
Trigger: GGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTAC...GGAGCTCCCAAGCCGCAGGGTGGACGCTGGAGACAAGAACCTCAGGGTCACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR TCA 90 bp AGCTCCTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTGTCTGCTGGGGCTGGTaGGGACCCGTCTCAAGATTC +
Preference number: 2 (lower is better)
Translates to: SSSSGGSPRTYAPATLQLVCWGW*GPVSRF
Trigger: GAATCTTGAGACGGGTCCTCACCAGCCCCAGCAGAC...AAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CAA 90 bp ATGCCAACCACCCAGGGTACGGGTGTAAACCCATTTCACAGACCTTaGTTCACATCGCCTCCCACCCCCGCGCGCTGGGTCCGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: MPTTQGTGVNPFHRP*FTSPPTPARWVRGL
Trigger: GAGCCCACGGACCCAGCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGGGTTTACACCCGTACCCTGGGTGGTTGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CAA 90 bp GTCGGCTTTAGGGACCCCAGTACCACAGGAGAGGTGGGGGCGCGCTaGGCGATCCGCCATTCCAACCTTCCTTTCCCTCTCAGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: VGFRDPSTTGEVGAR*AIRHSNLPFPLSCG
Trigger: ACCACAGCTGAGAGGGAAAGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACTGGGGTCCCTAAAGCCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR CCA 90 bp GCTCAGAATTCGAAAGCGTCGCCTGACGGTGGCCTTGCATACCCTCTTCCCACAGGCGGGGGTGCTGGTTaGGGCCAAACGCGTTCTGCC +
Preference number: 2 (lower is better)
Translates to: AQNSKASPDGGLAYPLPTGGGAG*GQTRSA
Trigger: GGCAGAACGCGTTTGGCCCCAACCAGCACCCCCGCC...TGTGGGAAGAGGGTATGCAAGGCCACCGTCAGGCGACGCTTTCGAATTCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR GCA 90 bp AGTACCACAGGAGAGGTGGGGGCGCGCTTGGCGATCCGCCATTCCAACCTTCCTGGGCCAAACGCGTTCTaGCCGGCACTTTATACTGAG +
Preference number: 2 (lower is better)
Translates to: STTGEVGARLAIRHSNLPGPNAF*PALYTE
Trigger: CTCAGTATAAAGTGCCGGGCAGAACGCGTTTGGCCC...AGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR CCA 90 bp GGTGTAAACCCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCTGGCCAAAAAGGCCCTaGTGGAAGGTAGGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GVNPFHRPLFTSPPTPARWPKRP*WKVGWG
Trigger: GCCCCAGCCTACCTTCCACCAGGGCCTTTTTGGCCA...GCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGGGTTTACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CAA 90 bp GGGAGGGGGCCAATCTCAAGGTGTACCTACTCTGTGCCAGCCCCCTaGTTAGCGCAGTCACCTAATTATGCCAACCACCCAGGGTACGGG +
Preference number: 2 (lower is better)
Translates to: GRGPISRCTYSVPAP*LAQSPNYANHPGYG
Trigger: CCCGTACCCTGGGTGGTTGGCATAATTAGGTGACTGCGCTAACAAGGGGGCTGGCACAGAGTAGGTACACCTTGAGATTGGCCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR TCA 90 bp AAGAAGTCATCGGTGCTCCAAGTCTTGCTGCTCAGAGCCCGCAGTGGTCCTCCCACAGCAGACTCTCGGTaGCTGGAACCATGCAGTCGA +
Preference number: 2 (lower is better)
Translates to: KKSSVLQVLLLRARSGPPTADSR*LEPCSR
Trigger: TCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGT...GGGAGGACCACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCGATGACTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR CAA 90 bp AGGGCTCACCACCTGGAGGCTTGGGCCCAGGGTTTAGACCTGCCCTaGTCTTTGCATTTTTCCTACAGGGCAGTCACACCTCTGTGGAGA +
Preference number: 2 (lower is better)
Translates to: RAHHLEAWAQGLDLP*SLHFSYRAVTPLWR
Trigger: TCTCCACAGAGGTGTGACTGCCCTGTAGGAAAAATGCAAAGACAAGGGCAGGTCTAAACCCTGGGCCCAAGCCTCCAGGTGGTGAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
3UTR-3UTR TCA 90 bp TGTGTAGCTCCAAAGGGCTCACCACCTGGAGGCTTGGGCCCAGGGTTTAGACCTTCCTCCTTTTCTTCCTaGGCCATGGAGTCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: CVAPKGSPPGGLGPGFRPSSFSS*AMESSP
Trigger: GGGAGAAGACTCCATGGCTCAGGAAGAAAAGGAGGA...AGGTCTAAACCCTGGGCCCAAGCCTCCAGGTGGTGAGCCCTTTGGAGCTACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR TCA 90 bp AACGGCCAGGTACAACACCTTTTTCATACAAGGCCCAGGAGGCTTAGTCCAGTCTTCGAAAGCGTCGCCTaGCGGTGGCCTTGCATACCC +
Preference number: 2 (lower is better)
Translates to: NGQVQHLFHTRPRRLSPVFESVA*RWPCIP
Trigger: GGGTATGCAAGGCCACCGTCAGGCGACGCTTTCGAA...GACTGGACTAAGCCTCCTGGGCCTTGTATGAAAAAGGTGTTGTACCTGGCCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR TCA 90 bp AGCTCTCAGGGCAAAGCGGTCACTTGTGGCCCCAAAGCCATTCCAATTGAAGAGCCCAGACTGAGGTTCTaGGAGCAGCTCAAACCGACG +
Preference number: 2 (lower is better)
Translates to: SSQGKAVTCGPKAIPIEEPRLRF*EQLKPT
Trigger: CGTCGGTTTGAGCTGCTCTCAGAACCTCAGTCTGGG...CTCTTCAATTGGAATGGCTTTGGGGCCACAAGTGACCGCTTTGCCCTGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR GCA 90 bp TGTGTAGCTCCAAAGGGCTCACCACCTGGAGGCTTGGGCCCAGGGTTTAGACCTCGAAGAAGTCATCGGTaGTCCAAGTCTTGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: CVAPKGSPPGGLGPGFRPRRSHR*SKSCCS
Trigger: TGAGCAGCAAGACTTGGAGCACCGATGACTTCTTCG...AGGTCTAAACCCTGGGCCCAAGCCTCCAGGTGGTGAGCCCTTTGGAGCTACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CCA 90 bp AAGAAGTCATCGGTGCTCCAAGTCTTGCTGCTCAGAGCCCGCAGTGGTCCTCCCAGATGGTACCTTCACTaGAGCCACAGGCTACCTTCT +
Preference number: 2 (lower is better)
Translates to: KKSSVLQVLLLRARSGPPRWYLH*SHRLPS
Trigger: AGAAGGTAGCCTGTGGCTCCAGTGAAGGTACCATCT...GGGAGGACCACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCGATGACTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR TCA 90 bp CTACAAATAACAGGACTGTGTAGCTCCAAAGGGCTCACCACCTGGAGGCTTGGGACATTGAGGCTGCAGTaGGCCAAGATCAAGCCAGCG +
Preference number: 2 (lower is better)
Translates to: LQITGLCSSKGLTTWRLGTLRLQ*AKIKPA
Trigger: CGCTGGCTTGATCTTGGCTCACTGCAGCCTCAATGT...CCCAAGCCTCCAGGTGGTGAGCCCTTTGGAGCTACACAGTCCTGTTATTTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR TCA 90 bp ATGGTACCTTCACTGGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATACCAGCAGAAGACTATTaGTGGGGGCACCATGAGCCT +
Preference number: 2 (lower is better)
Translates to: MVPSLEPQATFFPHCREIPAEDY*WGHHEP
Trigger: AGGCTCATGGTGCCCCCATCAATAGTCTTCTGCTGG...TATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCCAGTGAAGGTACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR TCA 90 bp GGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATAGAGAAAACAATGTGGTCAGGTCCCCAGACTaGGGTTCTGAGAGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: GATGYLLPPLQGNRENNVVRSPD*GSESSS
Trigger: TGAGCTGCTCTCAGAACCTCAGTCTGGGGACCTGAC...CACATTGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CCA 90 bp GCAGTCGATAGATTCAGCTCTCAGGGCAAAGCGGTCACTTGTGGCCCCAAAGCCGGGCACCATGAGCCTTaGAAACACGTCTTTCCAGTT +
Preference number: 2 (lower is better)
Translates to: AVDRFSSQGKAVTCGPKAGHHEP*KHVFPV
Trigger: AACTGGAAAGACGTGTTTCCAAGGCTCATGGTGCCC...GGCTTTGGGGCCACAAGTGACCGCTTTGCCCTGAGAGCTGAATCTATCGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR TCA 90 bp AGCTCTCAGGGCAAAGCGGTCACTTGTGGCCCCAAAGCCATTCCAATTGAAGAGTTGATGGGGGCACCATaGGCCTTGGAAACACGTCTT +
Preference number: 2 (lower is better)
Translates to: SSQGKAVTCGPKAIPIEELMGAP*ALETRL
Trigger: AAGACGTGTTTCCAAGGCTCATGGTGCCCCCATCAA...CTCTTCAATTGGAATGGCTTTGGGGCCACAAGTGACCGCTTTGCCCTGAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR GCA 90 bp GTCTCAGCTACCAGGCAGGCTGAGGTGGATCACTTGAGCCCAGGAAGTCAAGGATATCCTCTCTGGGGATaGAGCCCAATAAGCAAGACT +
Preference number: 2 (lower is better)
Translates to: VSATRQAEVDHLSPGSQGYPLWG*SPISKT
Trigger: AGTCTTGCTTATTGGGCTGCATCCCCAGAGAGGATA...TCCTTGACTTCCTGGGCTCAAGTGATCCACCTCAGCCTGCCTGGTAGCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR TCA 90 bp CTACAAATAACAGGACTGTGTAGCTCCAAAGGGCTCACCACCTGGAGGCTTGGGAAGTCAAGGATGCAGTaGGCCATGATCAACCCACTG +
Preference number: 2 (lower is better)
Translates to: LQITGLCSSKGLTTWRLGKSRMQ*AMINPL
Trigger: CAGTGGGTTGATCATGGCTCACTGCATCCTTGACTT...CCCAAGCCTCCAGGTGGTGAGCCCTTTGGAGCTACACAGTCCTGTTATTTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR GCA 90 bp CCTTTGCAAATAATGGAGGCTGAAGGCTTCATTGTCTTTTCTTACCCATGGTCAACAGGCTCCCCAGTGTaGTGGCCCACACTGCCCACC +
Preference number: 2 (lower is better)
Translates to: PLQIMEAEGFIVFSYPWSTGSPV*WPTLPT
Trigger: GGTGGGCAGTGTGGGCCAGCACACTGGGGAGCCTGT...TGACCATGGGTAAGAAAAGACAATGAAGCCTTCAGCCTCCATTATTTGCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CCA 90 bp GCCAGTACACAGCAGACTCTCGGTGACTGGAACCATGCAGTCGATAGATTCAGCCTGTGTCATCCCCAGTaGCCAGAACATTCTCATCCA +
Preference number: 2 (lower is better)
Translates to: ASTQQTLGDWNHAVDRFSLCHPQ*PEHSHP
Trigger: TGGATGAGAATGTTCTGGCCACTGGGGATGACACAG...GCTGAATCTATCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGTGTACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CCA 90 bp CTACAAATAACAGGACTGTGTAGCTCCAAAGGGCTCACCACCTGGAGGCTTGGGCAGACTCTCGGTGACTaGAACCATGCAGTCGATAGA +
Preference number: 2 (lower is better)
Translates to: LQITGLCSSKGLTTWRLGQTLGD*NHAVDR
Trigger: TCTATCGACTGCATGGTTCCAGTCACCGAGAGTCTG...CCCAAGCCTCCAGGTGGTGAGCCCTTTGGAGCTACACAGTCCTGTTATTTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR GCA 90 bp ACAGGCACCCTGGTGAGGACCCGTCTCAAGATTCAATTCATTCCTTCAGTCACTCTCTTCCCTCAGTCCTaGGAAGAAGTCATCGGTGCT +
Preference number: 2 (lower is better)
Translates to: TGTLVRTRLKIQFIPSVTLFPQS*EEVIGA
Trigger: AGCACCGATGACTTCTTCGCAGGACTGAGGGAAGAG...AGTGACTGAAGGAATGAATTGAATCTTGAGACGGGTCCTCACCAGGGTGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CCA 90 bp CCTTTGCAAATAATGGAGGCTGAAGGCTTCATTGTCTTTTCTTACCCATGGTCAGGTCATGGCCACTACTaGCCAGGAAGCGGCCACAGT +
Preference number: 2 (lower is better)
Translates to: PLQIMEAEGFIVFSYPWSGHGHY*PGSGHS
Trigger: ACTGTGGCCGCTTCCTGGCCAGTAGTGGCCATGACC...TGACCATGGGTAAGAAAAGACAATGAAGCCTTCAGCCTCCATTATTTGCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR TCA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCCCACAGGCACCCTGGTaGGGACCCGTCTCAAGATTC +
Preference number: 2 (lower is better)
Translates to: QVFPVKISHYDGYEADKAPQAPW*GPVSRF
Trigger: GAATCTTGAGACGGGTCCTCACCAGGGTGCCTGTGG...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR GCA 90 bp TGTGTAGCTCCAAAGGGCTCACCACCTGGAGGCTTGGGCCCAGGGTTTAGACCTTGCATCTTCTTGTGTTaGACTGTAGGGTATTATAAA +
Preference number: 2 (lower is better)
Translates to: CVAPKGSPPGGLGPGFRPCIFLC*TVGYYK
Trigger: TTTATAATACCCTACAGTGCAACACAAGAAGATGCA...AGGTCTAAACCCTGGGCCCAAGCCTCCAGGTGGTGAGCCCTTTGGAGCTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR CCA 90 bp ATTTGTGACACTTCCCGAGCATTACCTCCTGACTTAATTCTCAACCTTCCCCCACTCCAGAGGCTAAGGTaGAAGGACAATCTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: ICDTSRALPPDLILNLPPLQRLR*KDNLSL
Trigger: CAGGCTCAGATTGTCCTTCCACCTTAGCCTCTGGAG...TGGGGGAAGGTTGAGAATTAAGTCAGGAGGTAATGCTCGGGAAGTGTCACAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR TCA 90 bp CCTTTGCAAATAATGGAGGCTGAAGGCTTCATTGTCTTTTCTTACCCATGGTCAAAGACTCTTGCCTGGTaGGGACCCGTCTCAAGATTC +
Preference number: 2 (lower is better)
Translates to: PLQIMEAEGFIVFSYPWSKTLAW*GPVSRF
Trigger: GAATCTTGAGACGGGTCCTCACCAGGCAAGAGTCTT...TGACCATGGGTAAGAAAAGACAATGAAGCCTTCAGCCTCCATTATTTGCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR CCA 90 bp GGGAATCCAACTGAGCTTTTTACTACTATAGAATCTGTTTCCTCAGACTGTTATAAAGGGCTCACCACCTaGAGGCTTGGGCCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: GNPTELFTTIESVSSDCYKGLTT*RLGPRV
Trigger: AACCCTGGGCCCAAGCCTCCAGGTGGTGAGCCCTTT...ATAACAGTCTGAGGAAACAGATTCTATAGTAGTAAAAAGCTCAGTTGGATTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
3UTR-3UTR TCA 90 bp GGGAATCCAACTGAGCTTTTTACTACTATAGAATCTGTTTCCTCAGACTGTTATAGGCGGAGGTTGCAGTaGGCCAAGATCACGCCATTG +
Preference number: 2 (lower is better)
Translates to: GNPTELFTTIESVSSDCYRRRLQ*AKITPL
Trigger: CAATGGCGTGATCTTGGCTCACTGCAACCTCCGCCT...ATAACAGTCTGAGGAAACAGATTCTATAGTAGTAAAAAGCTCAGTTGGATTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR CCA 90 bp ATTTGTGACACTTCCCGAGCATTACCTCCTGACTTAATTCTCAACCTTCCCCCAAATTCATATCCTCTCTaGGGATGCAGCCCAATAAGC +
Preference number: 2 (lower is better)
Translates to: ICDTSRALPPDLILNLPPNSYPL*GCSPIS
Trigger: GCTTATTGGGCTGCATCCCCAGAGAGGATATGAATT...TGGGGGAAGGTTGAGAATTAAGTCAGGAGGTAATGCTCGGGAAGTGTCACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR GCA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCAAACAATGTGGAAGCTaGCTCAGACTAAGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: QVFPVKISHYDGYEADKAKQCGS*LRLSPQ
Trigger: CTGGGGGCTTAGTCTGAGGCAGCTTCCACATTGTTT...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CCA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCCAAAGCGGTCACTTGTaGCCCCAAAGCCATTCCAAT +
Preference number: 2 (lower is better)
Translates to: QVFPVKISHYDGYEADKAQSGHL*PQSHSN
Trigger: ATTGGAATGGCTTTGGGGCCACAAGTGACCGCTTTG...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CCA 90 bp ATTTGTGACACTTCCCGAGCATTACCTCCTGACTTAATTCTCAACCTTCCCCCAAAAATTAGTCAAGCATaGTGGCAGATGCCTGTTAAG +
Preference number: 2 (lower is better)
Translates to: ICDTSRALPPDLILNLPPKISQA*WQMPVK
Trigger: CTTAACAGGCATCTGCCACCATGCTTGACTAATTTT...TGGGGGAAGGTTGAGAATTAAGTCAGGAGGTAATGCTCGGGAAGTGTCACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR GCA 90 bp GGGAATCCAACTGAGCTTTTTACTACTATAGAATCTGTTTCCTCAGACTGTTATAATAAGCAAGACTCTTaGCTGGTGAGGACCCGTCTC +
Preference number: 2 (lower is better)
Translates to: GNPTELFTTIESVSSDCYNKQDS*LVRTRL
Trigger: GAGACGGGTCCTCACCAGGCAAGAGTCTTGCTTATT...ATAACAGTCTGAGGAAACAGATTCTATAGTAGTAAAAAGCTCAGTTGGATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR GCA 90 bp GGGAATCCAACTGAGCTTTTTACTACTATAGAATCTGTTTCCTCAGACTGTTATGGTAGAGTGAATAGCTaGTACGGGGCAAGTACTTCC +
Preference number: 2 (lower is better)
Translates to: GNPTELFTTIESVSSDCYGRVNS*YGASTS
Trigger: GGAAGTACTTGCCCCGTAGCAGCTATTCACTCTACC...ATAACAGTCTGAGGAAACAGATTCTATAGTAGTAAAAAGCTCAGTTGGATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR GCA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCACCTTCTTCCCCCACTaGAGGGAAATAGAGAAAACA +
Preference number: 2 (lower is better)
Translates to: QVFPVKISHYDGYEADKATFFPH*REIEKT
Trigger: TGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGT...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CCA 90 bp GGGAATCCAACTGAGCTTTTTACTACTATAGAATCTGTTTCCTCAGACTGTTATCTCCAGCCTGGACGATaGCAAAACCCTGTCTTTTCA +
Preference number: 2 (lower is better)
Translates to: GNPTELFTTIESVSSDCYLQPGR*QNPVFS
Trigger: TGAAAAGACAGGGTTTTGCCATCGTCCAGGCTGGAG...ATAACAGTCTGAGGAAACAGATTCTATAGTAGTAAAAAGCTCAGTTGGATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR GCA 90 bp GGGAATCCAACTGAGCTTTTTACTACTATAGAATCTGTTTCCTCAGACTGTTATACTTCCTCACATCAGTaGTTTGAGTGCATCTTCTTG +
Preference number: 2 (lower is better)
Translates to: GNPTELFTTIESVSSDCYTSSHQ*FECIFL
Trigger: CAAGAAGATGCACTCAAAGCACTGATGTGAGGAAGT...ATAACAGTCTGAGGAAACAGATTCTATAGTAGTAAAAAGCTCAGTTGGATTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR CAA 90 bp TGGCTCCACGTCCACCCGCCCCGTCGAGGGAGGGGGCCAATCTCAAGGTGTACCGGGCGGGGGTGCTGGTaGGGGCCAAACGCGTTCTGC +
Preference number: 3 (lower is better)
Translates to: WLHVHPPRRGRGPISRCTGRGCW*GPNAFC
Trigger: GCAGAACGCGTTTGGCCCCAACCAGCACCCCCGCCC...GGTACACCTTGAGATTGGCCCCCTCCCTCGACGGGGCGGGTGGACGTGGAGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CCA 72 bp GTTCACATCGCCTCCCACCCCCGCGCGCTGGGTCCGTaGGCTCAGAATTCGAAAGCGTCGCCTGACGGTGGC +
Preference number: 3 (lower is better)
Translates to: VHIASHPRALGP*AQNSKASPDGG
Trigger: GCCACCGTCAGGCGACGCTTTCGAATTCTGAGCCCACGGACCCAGCGCGCGGGGGTGGGAGGCGATGTGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CCA 72 bp CCCTGGTGGAAGGTAGGCTGGGGCGGGGGTGCTGGTTaGGGCCAAACGCGTTCTGCCCGGCACTTTATACTG +
Preference number: 3 (lower is better)
Translates to: PWWKVGWGGGAG*GQTRSARHFIL
Trigger: CAGTATAAAGTGCCGGGCAGAACGCGTTTGGCCCCAACCAGCACCCCCGCCCCAGCCTACCTTCCACCAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CCA 72 bp GGGTCGGCTTTAGGGACCCCAGTACCACAGGAGAGGTaGGGGCGCGCTTGGCGATCCGCCATTCCAACCTTC +
Preference number: 3 (lower is better)
Translates to: GSALGTPVPQER*GRAWRSAIPTF
Trigger: GAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACTGGGGTCCCTAAAGCCGACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CCA 72 bp CCTGAGGTTCTTGTCTCCAGCGTCCACCCTGCGGCTTaGGAGCTCCTCCTCGGGAGGCAGCCCCCGTACATA +
Preference number: 3 (lower is better)
Translates to: PEVLVSSVHPAA*ELLLGRQPPYI
Trigger: TATGTACGGGGGCTGCCTCCCGAGGAGGAGCTCCCAAGCCGCAGGGTGGACGCTGGAGACAAGAACCTCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR TCA 72 bp CCGTACATACGCACCCGCGACTTTGCAGCTTTCACCTaGAGGTCTGAGCGAAGCCCGGGCGGCGCACGTGCA +
Preference number: 3 (lower is better)
Translates to: PYIRTRDFAAFT*RSERSPGGARA
Trigger: TGCACGTGCGCCGCCCGGGCTTCGCTCAGACCTTCAGGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR TCA 72 bp GTCCAGTCTGTGCTCCTGGGCTACAAGGACCCAGCCTaGGATGGTCCCATCTGCAGGGCCCCGCACCAGTTG +
Preference number: 3 (lower is better)
Translates to: VQSVLLGYKDPA*DGPICRAPHQL
Trigger: CAACTGGTGCGGGGCCCTGCAGATGGGACCATCTCAGGCTGGGTCCTTGTAGCCCAGGAGCACAGACTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CCA 72 bp AGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCTaGGTCCGTGGGCTCAGAATTCGAAAGCGTCGCCTG +
Preference number: 3 (lower is better)
Translates to: RPLFTSPPTPAR*VRGLRIRKRRL
Trigger: CAGGCGACGCTTTCGAATTCTGAGCCCACGGACCCAGCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CCA 72 bp GGGACCCCAGTACCACAGGAGAGGTGGGGGCGCGCTTaGCGATCCGCCATTCCAACCTTCCTTTCCCTCTCA +
Preference number: 3 (lower is better)
Translates to: GTPVPQERWGRA*RSAIPTFLSLS
Trigger: TGAGAGGGAAAGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACTGGGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CCA 72 bp GCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTaGTCATGGCCACTACTGGCCAGGAAGCGGCCACAG +
Preference number: 3 (lower is better)
Translates to: ARSWAMSQNLRR*SWPLLARKRPQ
Trigger: CTGTGGCCGCTTCCTGGCCAGTAGTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CAA 90 bp TCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTTCACCTCGCCTGACGGTGGCCTaGCATACCCTCTTCCCACAG +
Preference number: 3 (lower is better)
Translates to: SSGGSPRTYAPATLQLSPRLTVA*HTLFPQ
Trigger: CTGTGGGAAGAGGGTATGCAAGGCCACCGTCAGGCG...AGGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR TCA 72 bp GCTGGGTCCGTGGGCTCAGAATTCGAAAGCGTCGCCTaGCGGTGGCCTTGCATACCCTCTTCCCACAGGCTG +
Preference number: 3 (lower is better)
Translates to: AGSVGSEFESVA*RWPCIPSSHRL
Trigger: CAGCCTGTGGGAAGAGGGTATGCAAGGCCACCGTCAGGCGACGCTTTCGAATTCTGAGCCCACGGACCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR TCA 72 bp CCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTTaGGGCGCTGGTCATGGCCACTACTGGCCAGGAAGC +
Preference number: 3 (lower is better)
Translates to: PPQLAAGPCPKT*GAGHGHYWPGS
Trigger: GCTTCCTGGCCAGTAGTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR CCA 72 bp AGCTGGGCCATGTCCCAAAACTTGAGGCGCTGGTCATaGCCACTACTGGCCAGGAAGCGGCCACAGTGGGAG +
Preference number: 3 (lower is better)
Translates to: SWAMSQNLRRWS*PLLARKRPQWE
Trigger: CTCCCACTGTGGCCGCTTCCTGGCCAGTAGTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CAA 90 bp ATCCACCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGGTCGGGCAAAGCGGTCACTaGTGGCCCCAAAGCCATTCC +
Preference number: 3 (lower is better)
Translates to: IHHHSSQLGHVPKLEALVGQSGH*WPQSHS
Trigger: GGAATGGCTTTGGGGCCACAAGTGACCGCTTTGCCC...GACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGGTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CAA 90 bp AGCTCCTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTCCATTTCACAGACCTTaGTTCACATCGCCTCCCACC +
Preference number: 3 (lower is better)
Translates to: SSSSGGSPRTYAPATLQLPFHRP*FTSPPT
Trigger: GGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGG...AAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR-3UTR CAA 90 bp TCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTTCACCTTCTGTGCCAGCCCCCTaGTTAGCGCAGTCACCTAAT +
Preference number: 3 (lower is better)
Translates to: SSGGSPRTYAPATLQLSPSVPAP*LAQSPN
Trigger: ATTAGGTGACTGCGCTAACAAGGGGGCTGGCACAGA...AGGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR GCA 72 bp CTCCCTCTTCCCTCAGTCCTGCGAAGAAGTCATCGGTaGTCCAAGTCTTGCTGCTCAGAGCCCGCAGTGGTC +
Preference number: 3 (lower is better)
Translates to: LPLPSVLRRSHR*SKSCCSEPAVV
Trigger: GACCACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCGATGACTTCTTCGCAGGACTGAGGGAAGAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR CCA 72 bp ATCAGTGGAGCCAGTACACAGCAGACTCTCGGTGACTaGAACCATGCAGTCGATAGATTCAGCTCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: ISGASTQQTLGD*NHAVDRFSSQG
Trigger: GCCCTGAGAGCTGAATCTATCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGTGTACTGGCTCCACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CAA 90 bp ATTTGTGACACTTCCCGAGCATTACCTCCTGACTTAATTCTCAACCTTCCCCCAGCCAAGATCACGCCATaGCACTCCAGCCCTGGCAAC +
Preference number: 3 (lower is better)
Translates to: ICDTSRALPPDLILNLPPAKITP*HSSPGN
Trigger: GTTGCCAGGGCTGGAGTGCAATGGCGTGATCTTGGC...TGGGGGAAGGTTGAGAATTAAGTCAGGAGGTAATGCTCGGGAAGTGTCACAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR CAA 90 bp GGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATAGAGAAAACAATGTGCGACGCCTCTTAATGTaGAAGATGCCAAGGCAGCCA +
Preference number: 3 (lower is better)
Translates to: GATGYLLPPLQGNRENNVRRLLM*KMPRQP
Trigger: TGGCTGCCTTGGCATCTTCAACATTAAGAGGCGTCG...CACATTGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR-3UTR CAA 90 bp ATTTGTGACACTTCCCGAGCATTACCTCCTGACTTAATTCTCAACCTTCCCCCAGCTGAGGTGGATCACTaGAGCCCAGGAAGTCAAGGA +
Preference number: 3 (lower is better)
Translates to: ICDTSRALPPDLILNLPPAEVDH*SPGSQG
Trigger: TCCTTGACTTCCTGGGCTCAAGTGATCCACCTCAGC...TGGGGGAAGGTTGAGAATTAAGTCAGGAGGTAATGCTCGGGAAGTGTCACAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR CAA 90 bp CTACAAATAACAGGACTGTGTAGCTCCAAAGGGCTCACCACCTGGAGGCTTGGGCCTCACATCAGTGCTTaGAGTGCATCTTCTTGTGTT +
Preference number: 3 (lower is better)
Translates to: LQITGLCSSKGLTTWRLGPHISA*SASSCV
Trigger: AACACAAGAAGATGCACTCAAAGCACTGATGTGAGG...CCCAAGCCTCCAGGTGGTGAGCCCTTTGGAGCTACACAGTCCTGTTATTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR GCA 72 bp TCCTCTCTGGGGATGCAGCCCAATAAGCAAGACTCTTaGCTGGTGAGGACCCGTCTCAAGATTCAATTCATT +
Preference number: 3 (lower is better)
Translates to: SSLGMQPNKQDS*LVRTRLKIQFI
Trigger: AATGAATTGAATCTTGAGACGGGTCCTCACCAGGCAAGAGTCTTGCTTATTGGGCTGCATCCCCAGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR CAA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCTCACCACCTGGAGGCTaGGGCCCAGGGTTTAGACCT +
Preference number: 3 (lower is better)
Translates to: QVFPVKISHYDGYEADKASPPGG*GPGFRP
Trigger: AGGTCTAAACCCTGGGCCCAAGCCTCCAGGTGGTGA...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
3UTR GCA 72 bp AATAGCTGCTACGGGGCAAGTACTTCCTCACATCAGTaGTTTGAGTGCATCTTCTTGTGTTGCACTGTAGGG +
Preference number: 3 (lower is better)
Translates to: NSCYGASTSSHQ*FECIFLCCTVG
Trigger: CCCTACAGTGCAACACAAGAAGATGCACTCAAAGCACTGATGTGAGGAAGTACTTGCCCCGTAGCAGCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR CAA 90 bp CCTTTGCAAATAATGGAGGCTGAAGGCTTCATTGTCTTTTCTTACCCATGGTCAGGTTTAGACCTGCCCTaGTCTTTGCATTTTTCCTAC +
Preference number: 3 (lower is better)
Translates to: PLQIMEAEGFIVFSYPWSGLDLP*SLHFSY
Trigger: GTAGGAAAAATGCAAAGACAAGGGCAGGTCTAAACC...TGACCATGGGTAAGAAAAGACAATGAAGCCTTCAGCCTCCATTATTTGCAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
3UTR TCA 72 bp GCAGTGTGTTATACTCCCTTTGCAAATAATGGAGGCTaGAGGCTTCATTGTCTTTTCTTACCCATGGTCACA +
Preference number: 3 (lower is better)
Translates to: AVCYTPFANNGG*RLHCLFLPMVT
Trigger: TGTGACCATGGGTAAGAAAAGACAATGAAGCCTTCAGCCTCCATTATTTGCAAAGGGAGTATAACACACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
3UTR-3UTR CAA 90 bp GGGAATCCAACTGAGCTTTTTACTACTATAGAATCTGTTTCCTCAGACTGTTATGACCTGCCCTTGTCTTaGCATTTTTCCTACAGGGCA +
Preference number: 3 (lower is better)
Translates to: GNPTELFTTIESVSSDCYDLPLS*HFSYRA
Trigger: TGCCCTGTAGGAAAAATGCAAAGACAAGGGCAGGTC...ATAACAGTCTGAGGAAACAGATTCTATAGTAGTAAAAAGCTCAGTTGGATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
3UTR-3UTR CAA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCTTTGAGTGCATCTTCTaGTGTTGCACTGTAGGGTAT +
Preference number: 3 (lower is better)
Translates to: QVFPVKISHYDGYEADKAFECIF*CCTVGY
Trigger: ATACCCTACAGTGCAACACAAGAAGATGCACTCAAA...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358337.9
3UTR-3UTR CAA 90 bp GGGAATCCAACTGAGCTTTTTACTACTATAGAATCTGTTTCCTCAGACTGTTATTGTGTTATACTCCCTTaGCAAATAATGGAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: GNPTELFTTIESVSSDCYCVILP*QIMEAE
Trigger: TTCAGCCTCCATTATTTGCAAAGGGAGTATAACACA...ATAACAGTCTGAGGAAACAGATTCTATAGTAGTAAAAAGCTCAGTTGGATTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
CDS-3UTR TCA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCGCCTGCCGCCGAATCTaGCCCGCAGCGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ATPRYGSPSPSACPATPAACRRI*PAARCC
Trigger: GCAGCAGCGCGCTGCGGGTCAGATTCGGCGGCAGGC...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCGGGCCCCGCACCAGTTaGAGCAGATGCCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: ATPRYGSPSPSACPATPAGPRTS*SRCLPT
Trigger: GGTGGGGAGGCATCTGCTCCAACTGGTGCGGGGCCC...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCACAGGCTCCCCAGTGTaGTGGCCCACACTGCCCACC +
Preference number: 4 (lower is better)
Translates to: ATPRYGSPSPSACPATPATGSPV*WPTLPT
Trigger: GGTGGGCAGTGTGGGCCAGCACACTGGGGAGCCTGT...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GTATGGCGGGCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTGTACCACAGGAGAGGTaGGGGCGCGCTTGGCGATCC +
Preference number: 4 (lower is better)
Translates to: VWRATPRYGSPSPSACPAVPQER*GRAWRS
Trigger: GGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTAC...AGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGCCCGCCATAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GTATGGCGGGCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTTGTGAGGTAAGCGGCTaGCGACTTGGGGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: VWRATPRYGSPSPSACPACEVSG*RLGGRR
Trigger: TCGCCGGCCCCCAAGTCGCCAGCCGCTTACCTCACA...AGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGCCCGCCATAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GTATGGCGGGCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTGGACCCAGCCTGAGATaGTCCCATCTGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VWRATPRYGSPSPSACPAGPSLR*SHLQGP
Trigger: GGGGCCCTGCAGATGGGACCATCTCAGGCTGGGTCC...AGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGCCCGCCATAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp GCCTCCCACCCCCGCGCGCTGGGTCCGTGGGCTCAGAATTCGAAAGCGTCGCCTCGCGCTCAGAGCCAATaGGAGCTTGCGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ASHPRALGPWAQNSKASPRAQSQ*ELAGWR
Trigger: CCTCCACCCCGCAAGCTCTCATTGGCTCTGAGCGCG...AGGCGACGCTTTCGAATTCTGAGCCCACGGACCCAGCGCGCGGGGGTGGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp TGTGGCTCCACGTCCACCCGCCCCGTCGAGGGAGGGGGCCAATCTCAAGGTGTATCGCGCTGCAGCCGCTaGGTCCCGGCTTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CGSTSTRPVEGGGQSQGVSRCSR*VPACRR
Trigger: CCTCCTGCAAGCCGGGACCCAGCGGCTGCAGCGCGA...TACACCTTGAGATTGGCCCCCTCCCTCGACGGGGCGGGTGGACGTGGAGCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp TGGCTCCACGTCCACCCGCCCCGTCGAGGGAGGGGGCCAATCTCAAGGTGTACCCCCACCCCCGCGCGCTaGGTCCGTGGGCTCAGAATT +
Preference number: 4 (lower is better)
Translates to: WLHVHPPRRGRGPISRCTPTPAR*VRGLRI
Trigger: AATTCTGAGCCCACGGACCCAGCGCGCGGGGGTGGG...GGTACACCTTGAGATTGGCCCCCTCCCTCGACGGGGCGGGTGGACGTGGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp TGGCTCCACGTCCACCCGCCCCGTCGAGGGAGGGGGCCAATCTCAAGGTGTACCCTCCAGCGTCCACCCTaGGGCTTGGGAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WLHVHPPRRGRGPISRCTLQRPP*GLGAPP
Trigger: AGGAGGAGCTCCCAAGCCGCAGGGTGGACGCTGGAG...GGTACACCTTGAGATTGGCCCCCTCCCTCGACGGGGCGGGTGGACGTGGAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCTACGAGGGGGCCAGCTaGAGAGCCATGCAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: ATPRYGSPSPSACPATPAYEGAS*RAMQSK
Trigger: CTTGGACTGCATGGCTCTCCAGCTGGCCCCCTCGTA...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCTACAAGGACCCAGCCTaGGATGGTCCCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ATPRYGSPSPSACPATPAYKDPA*DGPICR
Trigger: CCTGCAGATGGGACCATCTCAGGCTGGGTCCTTGTA...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp AGCTCCTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTCCGCCATCGCCACGCTaGACAACCATCCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SSSSGGSPRTYAPATLQLPPSPR*TTIRCG
Trigger: GCCGCAGCGGATGGTTGTGCAGCGTGGCGATGGCGG...AAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp GCCTCCCACCCCCGCGCGCTGGGTCCGTGGGCTCAGAATTCGAAAGCGTCGCCTCTTTGGGGGAGGGGCTaGTCCGAGCCTTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: ASHPRALGPWAQNSKASPLWGRG*SEPSLS
Trigger: TGACAGTGAAGGCTCGGAGCAGCCCCTCCCCCAAAG...AGGCGACGCTTTCGAATTCTGAGCCCACGGACCCAGCGCGCGGGGGTGGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp TCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTTCACCTCCCGGGCGGCGCACGTaGAGTGGATACCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: SSGGSPRTYAPATLQLSPPGRRT*SGYLHP
Trigger: GGGGTGGAGGTATCCACTGCACGTGCGCCGCCCGGG...AGGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp TGGCTCCACGTCCACCCGCCCCGTCGAGGGAGGGGGCCAATCTCAAGGTGTACCGCAAAGGAGGAACTGTaGCTCCACGTCCACCCGCCC +
Preference number: 4 (lower is better)
Translates to: WLHVHPPRRGRGPISRCTAKEEL*LHVHPP
Trigger: GGGCGGGTGGACGTGGAGCCACAGTTCCTCCTTTGC...GGTACACCTTGAGATTGGCCCCCTCCCTCGACGGGGCGGGTGGACGTGGAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp CTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTTCACCGTCCACCCTGCGGCTTaGGAGCTCCTCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLGRQPPYIRTRDFAAFTVHPAA*ELLLGR
Trigger: CCTCCCGAGGAGGAGCTCCCAAGCCGCAGGGTGGAC...GGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp TGTGGCTCCACGTCCACCCGCCCCGTCGAGGGAGGGGGCCAATCTCAAGGTGTATTCGAAAGCGTCGCCTaGCGGTGGCCTTGCATACCC +
Preference number: 4 (lower is better)
Translates to: CGSTSTRPVEGGGQSQGVFESVA*RWPCIP
Trigger: GGGTATGCAAGGCCACCGTCAGGCGACGCTTTCGAA...TACACCTTGAGATTGGCCCCCTCCCTCGACGGGGCGGGTGGACGTGGAGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp GAGGCCGGTGGGGAGGAAGTTATAAAGAGGGTACGAGGGGGCCAGCTGGAGAGCTTTCACCTGAAGGTCTaGGCGAAGCCCGGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: EAGGEEVIKRVRGGQLESFHLKV*AKPGRR
Trigger: GCGCCGCCCGGGCTTCGCTCAGACCTTCAGGTGAAA...GCTCTCCAGCTGGCCCCCTCGTACCCTCTTTATAACTTCCTCCCCACCGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp GCCTCCCACCCCCGCGCGCTGGGTCCGTGGGCTCAGAATTCGAAAGCGTCGCCTGGGCCAAACGCGTTCTaGCCGGCACTTTATACTGAG +
Preference number: 4 (lower is better)
Translates to: ASHPRALGPWAQNSKASPGPNAF*PALYTE
Trigger: CTCAGTATAAAGTGCCGGGCAGAACGCGTTTGGCCC...AGGCGACGCTTTCGAATTCTGAGCCCACGGACCCAGCGCGCGGGGGTGGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp CCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCTGGGTCCGTTGGTGGAAGGTAGGCTaGGGCGGGGGTGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PFHRPLFTSPPTPARWVRWWKVG*GGGAGW
Trigger: CCAACCAGCACCCCCGCCCCAGCCTACCTTCCACCA...ACGGACCCAGCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GAGGCCGGTGGGGAGGAAGTTATAAAGAGGGTACGAGGGGGCCAGCTGGAGAGCAGGTGGGGGCGCGCTTaGCGATCCGCCATTCCAACC +
Preference number: 4 (lower is better)
Translates to: EAGGEEVIKRVRGGQLESRWGRA*RSAIPT
Trigger: GGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCT...GCTCTCCAGCTGGCCCCCTCGTACCCTCTTTATAACTTCCTCCCCACCGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CAA 72 bp GGGCTCAGAATTCGAAAGCGTCGCCTGACGGTGGCCTaGCATACCCTCTTCCCACAGGCTGGGTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLRIRKRRLTVA*HTLFPQAGWAA
Trigger: GGCTGCCCACCCAGCCTGTGGGAAGAGGGTATGCAAGGCCACCGTCAGGCGACGCTTTCGAATTCTGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CAA 72 bp AGGGACCCCAGTACCACAGGAGAGGTGGGGGCGCGCTaGGCGATCCGCCATTCCAACCTTCCTTTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RDPSTTGEVGAR*AIRHSNLPFPL
Trigger: GAGAGGGAAAGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACTGGGGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CAA 72 bp TCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTaGCAGCTTTCACCTGAAGGTCTGAGCGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SGGSPRTYAPAT*QLSPEGLSEAR
Trigger: CCGGGCTTCGCTCAGACCTTCAGGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp AATTCGAAAGCGTCGCCTGACGGTGGCCTTGCATACCCTCTTCCCACAGGCTGGGGCGGGGGTGCTGGTTaGGGCCAAACGCGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: NSKASPDGGLAYPLPTGWGGGAG*GQTRSA
Trigger: GGCAGAACGCGTTTGGCCCCAACCAGCACCCCCGCC...CCAGCCTGTGGGAAGAGGGTATGCAAGGCCACCGTCAGGCGACGCTTTCGAATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCTTTCCCTCTCAGCTGTaGTGTGAGAGGGTGAATCCA +
Preference number: 4 (lower is better)
Translates to: ATPRYGSPSPSACPATPAFPSQL*CERVNP
Trigger: TGGATTCACCCTCTCACACCACAGCTGAGAGGGAAA...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp TCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTTCACCTCAGCTCGGCAGGCCTTaGGATGGTGACCTGATGACC +
Preference number: 4 (lower is better)
Translates to: SSGGSPRTYAPATLQLSPQLGRP*DGDLMT
Trigger: GGTCATCAGGTCACCATCTCAAGGCCTGCCGAGCTG...AGGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp TGGCTCCACGTCCACCCGCCCCGTCGAGGGAGGGGGCCAATCTCAAGGTGTACCTTGATGGGGGCACCATaGGCCTTGGAAACACGTCTT +
Preference number: 4 (lower is better)
Translates to: WLHVHPPRRGRGPISRCTLMGAP*ALETRL
Trigger: AAGACGTGTTTCCAAGGCTCATGGTGCCCCCATCAA...GGTACACCTTGAGATTGGCCCCCTCCCTCGACGGGGCGGGTGGACGTGGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp AGTACCACAGGAGAGGTGGGGGCGCGCTTGGCGATCCGCCATTCCAACCTTCCTGTCTGCTGGGGCTGGTaGGGACCCGTCTCAAGATTC +
Preference number: 4 (lower is better)
Translates to: STTGEVGARLAIRHSNLPVCWGW*GPVSRF
Trigger: GAATCTTGAGACGGGTCCTCACCAGCCCCAGCAGAC...AGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp CTCAGAGCCAATGAGAGCTTGCGGGGTGGAGGGGTAGGGAAGCTTCCAGAGGCCGTCCAAGCGGGATTGTaGGGTAAGCGGCTGGCGACT +
Preference number: 4 (lower is better)
Translates to: LRANESLRGGGVGKLPEAVQAGL*GKRLAT
Trigger: AGTCGCCAGCCGCTTACCTCACAATCCCGCTTGGAC...GGCCTCTGGAAGCTTCCCTACCCCTCCACCCCGCAAGCTCTCATTGGCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp TGGCTCCACGTCCACCCGCCCCGTCGAGGGAGGGGGCCAATCTCAAGGTGTACCCTCTTCCCTCAGTCCTaGGAAGAAGTCATCGGTGCT +
Preference number: 4 (lower is better)
Translates to: WLHVHPPRRGRGPISRCTLFPQS*EEVIGA
Trigger: AGCACCGATGACTTCTTCGCAGGACTGAGGGAAGAG...GGTACACCTTGAGATTGGCCCCCTCCCTCGACGGGGCGGGTGGACGTGGAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp GCAGTCGATAGATTCAGCTCTCAGGGCAAAGCGGTCACTTGTGGCCCCAAAGCCCATGCTGAGAAGGACTaGGAGCCGCGCCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AVDRFSSQGKAVTCGPKAHAEKD*EPRRRR
Trigger: CCTGCGGCGGCGCGGCTCGCAGTCCTTCTCAGCATG...GGCTTTGGGGCCACAAGTGACCGCTTTGCCCTGAGAGCTGAATCTATCGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp TGTGGCTCCACGTCCACCCGCCCCGTCGAGGGAGGGGGCCAATCTCAAGGTGTAACGCACCCGCGACTTTaGAGCTTTCACCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: CGSTSTRPVEGGGQSQGVTHPRL*SFHLKV
Trigger: GACCTTCAGGTGAAAGCTGCAAAGTCGCGGGTGCGT...TACACCTTGAGATTGGCCCCCTCCCTCGACGGGGCGGGTGGACGTGGAGCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GTCATCCACCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGGGCTTCCATGGAGTCTaGGTCCTCCTCGTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VIHHHSSQLGHVPKLEALGFHGV*VLLVAP
Trigger: GGGAGCGACGAGGAGGACCCAGACTCCATGGAAGCC...CAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGGTGGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp CCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCTGGGTCCGTGGTCATGGCCACTACTaGCCAGGAAGCGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: PFHRPLFTSPPTPARWVRGHGHY*PGSGHS
Trigger: ACTGTGGCCGCTTCCTGGCCAGTAGTGGCCATGACC...ACGGACCCAGCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GCCTCCCACCCCCGCGCGCTGGGTCCGTGGGCTCAGAATTCGAAAGCGTCGCCTTTTCTTCCTGAGCCATaGAGTCTTCTCCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ASHPRALGPWAQNSKASPFLPEP*SLLPLP
Trigger: GGGAAGAGGGAGAAGACTCCATGGCTCAGGAAGAAA...AGGCGACGCTTTCGAATTCTGAGCCCACGGACCCAGCGCGCGGGGGTGGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp CTTGTGACCCTGAGGTTCTTGTCTCCAGCGTCCACCCTGCGGCTTGGGAGCTCCTGGCCAAAAAGGCCCTaGTGGAAGGTAGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LVTLRFLSPASTLRLGSSWPKRP*WKVGWG
Trigger: GCCCCAGCCTACCTTCCACCAGGGCCTTTTTGGCCA...GGAGCTCCCAAGCCGCAGGGTGGACGCTGGAGACAAGAACCTCAGGGTCACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp CCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCTGGGTCCGTCAGGCCTTGAGATGGTaGCCTGATGACCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PFHRPLFTSPPTPARWVRQALRW*PDDQSS
Trigger: GGAGCTCTGGTCATCAGGTCACCATCTCAAGGCCTG...ACGGACCCAGCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp GAGGCCGGTGGGGAGGAAGTTATAAAGAGGGTACGAGGGGGCCAGCTGGAGAGCGTCAGGTCCCCAGACTaGGGTTCTGAGAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EAGGEEVIKRVRGGQLESVRSPD*GSESSS
Trigger: TGAGCTGCTCTCAGAACCTCAGTCTGGGGACCTGAC...GCTCTCCAGCTGGCCCCCTCGTACCCTCTTTATAACTTCCTCCCCACCGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp AGTACCACAGGAGAGGTGGGGGCGCGCTTGGCGATCCGCCATTCCAACCTTCCTCCATGTCCCAAAACTTaGGGCGCTGGTCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: STTGEVGARLAIRHSNLPPCPKT*GAGHGH
Trigger: GTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGG...AGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp GCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGGTCATGGCCACTACTGCGGTGCTCCAAGTCTTaGTGCTCAGAGCCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: ARSWAMSQNLRRWSWPLLRCSKS*CSEPAV
Trigger: CACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCG...CAGTAGTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp TGTGTAGCTCCAAAGGGCTCACCACCTGGAGGCTTGGGCCCAGGGTTTAGACCTGTCCCGGATCCGGGTTaGGGCTTCCATGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: CVAPKGSPPGGLGPGFRPVPDPG*GFHGVW
Trigger: CCAGACTCCATGGAAGCCCCAACCCGGATCCGGGAC...AGGTCTAAACCCTGGGCCCAAGCCTCCAGGTGGTGAGCCCTTTGGAGCTACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp TCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTTCACCTTTGAGGCGCTGGTCATaGCCACTACTGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSGGSPRTYAPATLQLSPLRRWS*PLLARK
Trigger: CTTCCTGGCCAGTAGTGGCCATGACCAGCGCCTCAA...AGGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp AGTACCACAGGAGAGGTGGGGGCGCGCTTGGCGATCCGCCATTCCAACCTTCCTTCCAGTCTGTGCTCCTaGGCTACAAGGACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: STTGEVGARLAIRHSNLPSSLCS*ATRTQP
Trigger: AGGCTGGGTCCTTGTAGCCCAGGAGCACAGACTGGA...AGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CAA 72 bp ACCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTaGAGGCGCTGGTCATGGCCACTACTGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TTTARSWAMSQN*RRWSWPLLARK
Trigger: CTTCCTGGCCAGTAGTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR TCA 90 bp CTTGTGACCCTGAGGTTCTTGTCTCCAGCGTCCACCCTGCGGCTTGGGAGCTCCACAGCAGACTCTCGGTaGCTGGAACCATGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LVTLRFLSPASTLRLGSSTADSR*LEPCSR
Trigger: TCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGT...GGAGCTCCCAAGCCGCAGGGTGGACGCTGGAGACAAGAACCTCAGGGTCACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp ATCCACCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGGTCCCATGTCCCAAAACTTaGGGCGCTGGTCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: IHHHSSQLGHVPKLEALVPCPKT*GAGHGH
Trigger: GTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGG...GACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR TCA 90 bp GAGGCCGGTGGGGAGGAAGTTATAAAGAGGGTACGAGGGGGCCAGCTGGAGAGCTTTGCAGCTTTCACCTaGAGGTCTGAGCGAAGCCCG +
Preference number: 4 (lower is better)
Translates to: EAGGEEVIKRVRGGQLESFAAFT*RSERSP
Trigger: CGGGCTTCGCTCAGACCTTCAGGTGAAAGCTGCAAA...GCTCTCCAGCTGGCCCCCTCGTACCCTCTTTATAACTTCCTCCCCACCGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp GAAGTTATAAAGAGGGTACGAGGGGGCCAGCTGGAGAGCCATGCAGTCCAAGCGGTCTGCGTGTGTCAGTaGTGCCTAGCCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: EVIKRVRGGQLESHAVQAVCVCQ*CLAPPS
Trigger: GGAAGGCGGGGCTAGGCATCACTGACACACGCAGAC...CGCTTGGACTGCATGGCTCTCCAGCTGGCCCCCTCGTACCCTCTTTATAACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp GTCATCCACCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGTGCTCCAAGTCTTGCTaGTCAGAGCCCGCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: VIHHHSSQLGHVPKLEALCSKSC*SEPAVV
Trigger: GACCACTGCGGGCTCTGAGCAGCAAGACTTGGAGCA...CAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGGTGGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp GGTGTAAACCCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCCGGTGCTCCAAGTCTTaGTGCTCAGAGCCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: GVNPFHRPLFTSPPTPARRCSKS*CSEPAV
Trigger: CACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCG...GCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGGGTTTACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp AAGAAGTCATCGGTGCTCCAAGTCTTGCTGCTCAGAGCCCGCAGTGGTCCTCCCGGGTTGGGGCTTCCATaGAGTCTGGGTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: KKSSVLQVLLLRARSGPPGLGLP*SLGPPR
Trigger: ACGAGGAGGACCCAGACTCCATGGAAGCCCCAACCC...GGGAGGACCACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCGATGACTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp CTTGTGACCCTGAGGTTCTTGTCTCCAGCGTCCACCCTGCGGCTTGGGAGCTCCCAAAACTTGAGGCGCTaGTCATGGCCACTACTGGCC +
Preference number: 4 (lower is better)
Translates to: LVTLRFLSPASTLRLGSSQNLRR*SWPLLA
Trigger: GGCCAGTAGTGGCCATGACCAGCGCCTCAAGTTTTG...GGAGCTCCCAAGCCGCAGGGTGGACGCTGGAGACAAGAACCTCAGGGTCACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp CTCAGAGCCAATGAGAGCTTGCGGGGTGGAGGGGTAGGGAAGCTTCCAGAGGCCTCCTCCTTTTCTTCCTaGGCCATGGAGTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LRANESLRGGGVGKLPEASSFSS*AMESSP
Trigger: GGGAGAAGACTCCATGGCTCAGGAAGAAAAGGAGGA...GGCCTCTGGAAGCTTCCCTACCCCTCCACCCCGCAAGCTCTCATTGGCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GAAGTTATAAAGAGGGTACGAGGGGGCCAGCTGGAGAGCCATGCAGTCCAAGCGGGCAGCCATCCCCGCTaGCTGTCAGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: EVIKRVRGGQLESHAVQAGSHPR*LSAAAF
Trigger: AAAAGCTGCTGCTGACAGCCAGCGGGGATGGCTGCC...CGCTTGGACTGCATGGCTCTCCAGCTGGCCCCCTCGTACCCTCTTTATAACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp CTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTTCACCCAGACTCTCGGTGACTaGAACCATGCAGTCGATAGA +
Preference number: 4 (lower is better)
Translates to: LLGRQPPYIRTRDFAAFTQTLGD*NHAVDR
Trigger: TCTATCGACTGCATGGTTCCAGTCACCGAGAGTCTG...GGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp GCTCAGAATTCGAAAGCGTCGCCTGACGGTGGCCTTGCATACCCTCTTCCCACACCCAGACTGAGGTTCTaGGAGCAGCTCAAACCGACG +
Preference number: 4 (lower is better)
Translates to: AQNSKASPDGGLAYPLPTPRLRF*EQLKPT
Trigger: CGTCGGTTTGAGCTGCTCTCAGAACCTCAGTCTGGG...TGTGGGAAGAGGGTATGCAAGGCCACCGTCAGGCGACGCTTTCGAATTCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp AGAAGTCATCGGTGCTCCAAGTCTTGCTGCTCAGAGCCCGCAGTGGTCCTCCCTCCCCAGTACTCACTCTaGCCATCTTCAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RSHRCSKSCCSEPAVVLPPQYSL*PSSEKA
Trigger: GGCCTTCTCTGAAGATGGGCAGAGTGAGTACTGGGG...AGGGAGGACCACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCGATGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATAGAGAAAACAATGTGAGGTCACGGGCCGGATaGAACGCCAGCCCACTAGCC +
Preference number: 4 (lower is better)
Translates to: GATGYLLPPLQGNRENNVRSRAG*NASPLA
Trigger: GGCTAGTGGGCTGGCGTTCCATCCGGCCCGTGACCT...CACATTGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GAGGCCGGTGGGGAGGAAGTTATAAAGAGGGTACGAGGGGGCCAGCTGGAGAGCCTGTGTCATCCCCAGTaGCCAGAACATTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: EAGGEEVIKRVRGGQLESLCHPQ*PEHSHP
Trigger: TGGATGAGAATGTTCTGGCCACTGGGGATGACACAG...GCTCTCCAGCTGGCCCCCTCGTACCCTCTTTATAACTTCCTCCCCACCGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp CTCAGAGCCAATGAGAGCTTGCGGGGTGGAGGGGTAGGGAAGCTTCCAGAGGCCAGATGGTACCTTCACTaGAGCCACAGGCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: LRANESLRGGGVGKLPEARWYLH*SHRLPS
Trigger: AGAAGGTAGCCTGTGGCTCCAGTGAAGGTACCATCT...GGCCTCTGGAAGCTTCCCTACCCCTCCACCCCGCAAGCTCTCATTGGCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp AATTCGAAAGCGTCGCCTGACGGTGGCCTTGCATACCCTCTTCCCACAGGCTGGACCACAGCTCGCAGCTaGGCCATGTCCCAAAACTTG +
Preference number: 4 (lower is better)
Translates to: NSKASPDGGLAYPLPTGWTTARS*AMSQNL
Trigger: CAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGT...CCAGCCTGTGGGAAGAGGGTATGCAAGGCCACCGTCAGGCGACGCTTTCGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CAA 72 bp GACTGTGTAGCTCCAAAGGGCTCACCACCTGGAGGCTaGGGCCCAGGGTTTAGACCTGCCCTTGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: DCVAPKGSPPGG*GPGFRPALVFA
Trigger: TGCAAAGACAAGGGCAGGTCTAAACCCTGGGCCCAAGCCTCCAGGTGGTGAGCCCTTTGGAGCTACACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
CDS-3UTR TCA 90 bp AGCTCTCAGGGCAAAGCGGTCACTTGTGGCCCCAAAGCCATTCCAATTGAAGAGCAGCTCGGCAGGCCTTaGGATGGTGACCTGATGACC +
Preference number: 4 (lower is better)
Translates to: SSQGKAVTCGPKAIPIEEQLGRP*DGDLMT
Trigger: GGTCATCAGGTCACCATCTCAAGGCCTGCCGAGCTG...CTCTTCAATTGGAATGGCTTTGGGGCCACAAGTGACCGCTTTGCCCTGAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR TCA 90 bp GAAGTTATAAAGAGGGTACGAGGGGGCCAGCTGGAGAGCCATGCAGTCCAAGCGCCAGCAGAAGACTATTaGTGGGGGCACCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: EVIKRVRGGQLESHAVQAPAEDY*WGHHEP
Trigger: AGGCTCATGGTGCCCCCATCAATAGTCTTCTGCTGG...CGCTTGGACTGCATGGCTCTCCAGCTGGCCCCCTCGTACCCTCTTTATAACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp AGAAGTCATCGGTGCTCCAAGTCTTGCTGCTCAGAGCCCGCAGTGGTCCTCCCTTCCTCCTTTTCTTCCTaGGCCATGGAGTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RSHRCSKSCCSEPAVVLPSSFSS*AMESSP
Trigger: GGGAGAAGACTCCATGGCTCAGGAAGAAAAGGAGGA...AGGGAGGACCACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCGATGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR TCA 90 bp AGTCTTCTCCCTCTTCCCTCAGTCCTGCGAAGAAGTCATCGGTGCTCCAAGTCTCCACAGGCACCCTGGTaGGGACCCGTCTCAAGATTC +
Preference number: 4 (lower is better)
Translates to: SLLPLPSVLRRSHRCSKSPQAPW*GPVSRF
Trigger: GAATCTTGAGACGGGTCCTCACCAGGGTGCCTGTGG...AGACTTGGAGCACCGATGACTTCTTCGCAGGACTGAGGGAAGAGGGAGAAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp CTCAGAGCCAATGAGAGCTTGCGGGGTGGAGGGGTAGGGAAGCTTCCAGAGGCCACAGTAATGAGCTTCTaGCCATCTTCAGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LRANESLRGGGVGKLPEATVMSF*PSSEKA
Trigger: GGCCTTCTCTGAAGATGGGCAGAAGCTCATTACTGT...GGCCTCTGGAAGCTTCCCTACCCCTCCACCCCGCAAGCTCTCATTGGCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp GCCAGTACACAGCAGACTCTCGGTGACTGGAACCATGCAGTCGATAGATTCAGCTGTGCTGGCCCACACTaGCCACCACTCGGTTCGGTA +
Preference number: 4 (lower is better)
Translates to: ASTQQTLGDWNHAVDRFSCAGPH*PPLGSV
Trigger: TACCGAACCGAGTGGTGGGCAGTGTGGGCCAGCACA...GCTGAATCTATCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGTGTACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp ATCCACCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGGTCCGAAGAAGTCATCGGTaGTCCAAGTCTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: IHHHSSQLGHVPKLEALVRRSHR*SKSCCS
Trigger: TGAGCAGCAAGACTTGGAGCACCGATGACTTCTTCG...GACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp GCTCAGAATTCGAAAGCGTCGCCTGACGGTGGCCTTGCATACCCTCTTCCCACAACCAGTTGGAGCAGATaGCTCCCCACCACCAATTGC +
Preference number: 4 (lower is better)
Translates to: AQNSKASPDGGLAYPLPTTSWSR*LPTTNC
Trigger: GCAATTGGTGGTGGGGAGGCATCTGCTCCAACTGGT...TGTGGGAAGAGGGTATGCAAGGCCACCGTCAGGCGACGCTTTCGAATTCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp AGCTCCTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTCATCTAGAACATGGATaGCTTTGTCCTTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SSSSGGSPRTYAPATLQLHLEHG*LCPWRQ
Trigger: CTGTCTCCAAGGACAAAGCCATCCATGTTCTAGATG...AAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GTCATCCACCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGCTGTGTCATCCCCAGTaGCCAGAACATTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: VIHHHSSQLGHVPKLEALLCHPQ*PEHSHP
Trigger: TGGATGAGAATGTTCTGGCCACTGGGGATGACACAG...CAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGGTGGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GCCAGTACACAGCAGACTCTCGGTGACTGGAACCATGCAGTCGATAGATTCAGCGGCAGCCATCCCCGCTaGCTGTCAGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: ASTQQTLGDWNHAVDRFSGSHPR*LSAAAF
Trigger: AAAAGCTGCTGCTGACAGCCAGCGGGGATGGCTGCC...GCTGAATCTATCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGTGTACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp TTAATGTTGAAGATGCCAAGGCAGCCATCCCCGCTGGCTGTCAGCAGCAGCTTTGGTCATGGCCACTACTaGCCAGGAAGCGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: LMLKMPRQPSPLAVSSSFGHGHY*PGSGHS
Trigger: ACTGTGGCCGCTTCCTGGCCAGTAGTGGCCATGACC...AAAGCTGCTGCTGACAGCCAGCGGGGATGGCTGCCTTGGCATCTTCAACATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp AAACAATGTGGAAGCTGCCTCAGACTAAGCCCCCAGCACACACCCCTCCATCCCCAAAACTTGAGGCGCTaGTCATGGCCACTACTGGCC +
Preference number: 4 (lower is better)
Translates to: KQCGSCLRLSPQHTPLHPQNLRR*SWPLLA
Trigger: GGCCAGTAGTGGCCATGACCAGCGCCTCAAGTTTTG...GGGATGGAGGGGTGTGTGCTGGGGGCTTAGTCTGAGGCAGCTTCCACATTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp ATCCACCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGGTCTTTCTTCCTGAGCCATaGAGTCTTCTCCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: IHHHSSQLGHVPKLEALVFLPEP*SLLPLP
Trigger: GGGAAGAGGGAGAAGACTCCATGGCTCAGGAAGAAA...GACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GGTGTAAACCCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCGCTTCCAGAGGCCGGTaGGGAGGAAGTTATAAAGAG +
Preference number: 4 (lower is better)
Translates to: GVNPFHRPLFTSPPTPARASRGR*GGSYKE
Trigger: CTCTTTATAACTTCCTCCCCACCGGCCTCTGGAAGC...GCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGGGTTTACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CAA 72 bp GGTTCTGAGAGCAGCTCAAACCGACGCCTCTTAATGTaGAAGATGCCAAGGCAGCCATCCCCGCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GSESSSNRRLLM*KMPRQPSPLAV
Trigger: GACAGCCAGCGGGGATGGCTGCCTTGGCATCTTCAACATTAAGAGGCGTCGGTTTGAGCTGCTCTCAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR TCA 90 bp TTAATGTTGAAGATGCCAAGGCAGCCATCCCCGCTGGCTGTCAGCAGCAGCTTTGTCAGGTCCCCAGACTaGGGTTCTGAGAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LMLKMPRQPSPLAVSSSFVRSPD*GSESSS
Trigger: TGAGCTGCTCTCAGAACCTCAGTCTGGGGACCTGAC...AAAGCTGCTGCTGACAGCCAGCGGGGATGGCTGCCTTGGCATCTTCAACATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp GGTGTAAACCCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCCTTTCCAGTTGGCCCTaGTCCACATCTAGAACATGG +
Preference number: 4 (lower is better)
Translates to: GVNPFHRPLFTSPPTPARLSSWP*STSRTW
Trigger: CCATGTTCTAGATGTGGAGCAGGGCCAACTGGAAAG...GCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGGGTTTACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp GGTGTAAACCCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCCGAAGAAGTCATCGGTaGTCCAAGTCTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GVNPFHRPLFTSPPTPARRRSHR*SKSCCS
Trigger: TGAGCAGCAAGACTTGGAGCACCGATGACTTCTTCG...GCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGGGTTTACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp GGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATAGAGAAAACAATGTGCCCAGGTCATGGTGCTaGTCACTGCTCCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: GATGYLLPPLQGNRENNVPRSWC*SLLPST
Trigger: GGTGGAAGGGAGCAGTGAGCAGCACCATGACCTGGG...CACATTGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp AGTACCACAGGAGAGGTGGGGGCGCGCTTGGCGATCCGCCATTCCAACCTTCCTAAAGGTCCAATAAAATaGCTCAACCACGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: STTGEVGARLAIRHSNLPKGPIK*LNHGVC
Trigger: GCAGACTCCGTGGTTGAGGCATTTTATTGGACCTTT...AGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp GGTGTAAACCCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCATGACCAGAGCTCCTTaGTTTCTCCCTCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GVNPFHRPLFTSPPTPARMTRAP*FLPLGK
Trigger: CTTGCCAAGAGGGAGAAACCAAGGAGCTCTGGTCAT...GCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGGGTTTACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp CTCAGAGCCAATGAGAGCTTGCGGGGTGGAGGGGTAGGGAAGCTTCCAGAGGCCTCCACATCTAGAACATaGATGGCTTTGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LRANESLRGGGVGKLPEASTSRT*MALSLE
Trigger: CTCCAAGGACAAAGCCATCCATGTTCTAGATGTGGA...GGCCTCTGGAAGCTTCCCTACCCCTCCACCCCGCAAGCTCTCATTGGCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp TCACCTAATTATGCCAACCACCCAGGGTACGGGTGTAAACCCATTTCACAGACCCGCGCGCTGGGTCCGTaGGCTCAGAATTCGAAAGCG +
Preference number: 4 (lower is better)
Translates to: SPNYANHPGYGCKPISQTRALGP*AQNSKA
Trigger: CGCTTTCGAATTCTGAGCCCACGGACCCAGCGCGCG...GGTCTGTGAAATGGGTTTACACCCGTACCCTGGGTGGTTGGCATAATTAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
3UTR CAA 72 bp GAGGCTTGGGCCCAGGGTTTAGACCTGCCCTTGTCTTaGCATTTTTCCTACAGGGCAGTCACACCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: EAWAQGLDLPLS*HFSYRAVTPLW
Trigger: CCACAGAGGTGTGACTGCCCTGTAGGAAAAATGCAAAGACAAGGGCAGGTCTAAACCCTGGGCCCAAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
CDS-3UTR TCA 90 bp AGCTCTCAGGGCAAAGCGGTCACTTGTGGCCCCAAAGCCATTCCAATTGAAGAGCCAGCAGAAGACTATTaGTGGGGGCACCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: SSQGKAVTCGPKAIPIEEPAEDY*WGHHEP
Trigger: AGGCTCATGGTGCCCCCATCAATAGTCTTCTGCTGG...CTCTTCAATTGGAATGGCTTTGGGGCCACAAGTGACCGCTTTGCCCTGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR TCA 90 bp AGCTCTCAGGGCAAAGCGGTCACTTGTGGCCCCAAAGCCATTCCAATTGAAGAGACAGCAGACTCTCGGTaGCTGGAACCATGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: SSQGKAVTCGPKAIPIEETADSR*LEPCSR
Trigger: TCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGT...CTCTTCAATTGGAATGGCTTTGGGGCCACAAGTGACCGCTTTGCCCTGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp TCACCTAATTATGCCAACCACCCAGGGTACGGGTGTAAACCCATTTCACAGACCTGTGCTGGCCCACACTaGCCACCACTCGGTTCGGTA +
Preference number: 4 (lower is better)
Translates to: SPNYANHPGYGCKPISQTCAGPH*PPLGSV
Trigger: TACCGAACCGAGTGGTGGGCAGTGTGGGCCAGCACA...GGTCTGTGAAATGGGTTTACACCCGTACCCTGGGTGGTTGGCATAATTAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp AAACAATGTGGAAGCTGCCTCAGACTAAGCCCCCAGCACACACCCCTCCATCCCAAACAATGTGGAAGCTaGCTCAGACTAAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: KQCGSCLRLSPQHTPLHPKQCGS*LRLSPQ
Trigger: CTGGGGGCTTAGTCTGAGGCAGCTTCCACATTGTTT...GGGATGGAGGGGTGTGTGCTGGGGGCTTAGTCTGAGGCAGCTTCCACATTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATAGAGAAAACAATGTGTTGAGGCGCTGGTCATaGCCACTACTGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GATGYLLPPLQGNRENNVLRRWS*PLLARK
Trigger: CTTCCTGGCCAGTAGTGGCCATGACCAGCGCCTCAA...CACATTGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp ACAGGCACCCTGGTGAGGACCCGTCTCAAGATTCAATTCATTCCTTCAGTCACTAAAGGGCTCACCACCTaGAGGCTTGGGCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: TGTLVRTRLKIQFIPSVTKGLTT*RLGPRV
Trigger: AACCCTGGGCCCAAGCCTCCAGGTGGTGAGCCCTTT...AGTGACTGAAGGAATGAATTGAATCTTGAGACGGGTCCTCACCAGGGTGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATAGAGAAAACAATGTGAAGGTGCCCAGGTCATaGTGCTGCTCACTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GATGYLLPPLQGNRENNVKVPRS*CCSLLP
Trigger: AGGGAGCAGTGAGCAGCACCATGACCTGGGCACCTT...CACATTGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp TCACCTAATTATGCCAACCACCCAGGGTACGGGTGTAAACCCATTTCACAGACCTGCTCCAAGTCTTGCTaGTCAGAGCCCGCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: SPNYANHPGYGCKPISQTCSKSC*SEPAVV
Trigger: GACCACTGCGGGCTCTGAGCAGCAAGACTTGGAGCA...GGTCTGTGAAATGGGTTTACACCCGTACCCTGGGTGGTTGGCATAATTAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR GCA 90 bp CTACAAATAACAGGACTGTGTAGCTCCAAAGGGCTCACCACCTGGAGGCTTGGGCTCTTCCCTCAGTCCTaGGAAGAAGTCATCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LQITGLCSSKGLTTWRLGLFPQS*EEVIGA
Trigger: AGCACCGATGACTTCTTCGCAGGACTGAGGGAAGAG...CCCAAGCCTCCAGGTGGTGAGCCCTTTGGAGCTACACAGTCCTGTTATTTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATAGAGAAAACAATGTGACCACAGCTCGCAGCTaGGCCATGTCCCAAAACTTG +
Preference number: 4 (lower is better)
Translates to: GATGYLLPPLQGNRENNVTTARS*AMSQNL
Trigger: CAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGT...CACATTGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp AGTCTTCTCCCTCTTCCCTCAGTCCTGCGAAGAAGTCATCGGTGCTCCAAGTCTACACGTCTTTCCAGTTaGCCCTGCTCCACATCTAGA +
Preference number: 4 (lower is better)
Translates to: SLLPLPSVLRRSHRCSKSTRLSS*PCSTSR
Trigger: TCTAGATGTGGAGCAGGGCCAACTGGAAAGACGTGT...AGACTTGGAGCACCGATGACTTCTTCGCAGGACTGAGGGAAGAGGGAGAAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp ATGGTACCTTCACTGGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATAAGATGGTACCTTCACTaGAGCCACAGGCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: MVPSLEPQATFFPHCREIRWYLH*SHRLPS
Trigger: AGAAGGTAGCCTGTGGCTCCAGTGAAGGTACCATCT...TATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCCAGTGAAGGTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GCCAGTACACAGCAGACTCTCGGTGACTGGAACCATGCAGTCGATAGATTCAGCCTTCCACCACATTGCTaGTTGTCTTCCCCAGTACTC +
Preference number: 4 (lower is better)
Translates to: ASTQQTLGDWNHAVDRFSLPPHC*LSSPVL
Trigger: GAGTACTGGGGAAGACAACCAGCAATGTGGTGGAAG...GCTGAATCTATCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGTGTACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR TCA 90 bp ATTTGTGACACTTCCCGAGCATTACCTCCTGACTTAATTCTCAACCTTCCCCCACAGGCCTTGAGATGGTaGCCTGATGACCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ICDTSRALPPDLILNLPPQALRW*PDDQSS
Trigger: GGAGCTCTGGTCATCAGGTCACCATCTCAAGGCCTG...TGGGGGAAGGTTGAGAATTAAGTCAGGAGGTAATGCTCGGGAAGTGTCACAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR TCA 90 bp GCAGTCGATAGATTCAGCTCTCAGGGCAAAGCGGTCACTTGTGGCCCCAAAGCCGCAAATAATGGAGGCTaGAGGCTTCATTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: AVDRFSSQGKAVTCGPKAANNGG*RLHCLF
Trigger: GAAAAGACAATGAAGCCTTCAGCCTCCATTATTTGC...GGCTTTGGGGCCACAAGTGACCGCTTTGCCCTGAGAGCTGAATCTATCGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp GGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATAGAGAAAACAATGTGCTTTCCAGTTGGCCCTaGTCCACATCTAGAACATGG +
Preference number: 4 (lower is better)
Translates to: GATGYLLPPLQGNRENNVLSSWP*STSRTW
Trigger: CCATGTTCTAGATGTGGAGCAGGGCCAACTGGAAAG...CACATTGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCACAGGCTCCCCAGTGTaGTGGCCCACACTGCCCACC +
Preference number: 4 (lower is better)
Translates to: QVFPVKISHYDGYEADKATGSPV*WPTLPT
Trigger: GGTGGGCAGTGTGGGCCAGCACACTGGGGAGCCTGT...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp GGTGTAAACCCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCTTCACTGTCAGAAACTaGGAACTACCCGGATTTATA +
Preference number: 4 (lower is better)
Translates to: GVNPFHRPLFTSPPTPARFTVRN*ELPGFI
Trigger: TATAAATCCGGGTAGTTCGCAGTTTCTGACAGTGAA...GCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGGGTTTACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCAAGTGCGGTCCATGCTaGGAAGGACTGCGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: QVFPVKISHYDGYEADKAKCGPC*EGLRAA
Trigger: CGCGGCTCGCAGTCCTTCTCAGCATGGACCGCACTT...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp GCCAGTACACAGCAGACTCTCGGTGACTGGAACCATGCAGTCGATAGATTCAGCACCTTCTTCCCCCACTaGAGGGAAATAGAGAAAACA +
Preference number: 4 (lower is better)
Translates to: ASTQQTLGDWNHAVDRFSTFFPH*REIEKT
Trigger: TGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGT...GCTGAATCTATCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGTGTACTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GCCAGTACACAGCAGACTCTCGGTGACTGGAACCATGCAGTCGATAGATTCAGCCATCTAGAACATGGATaGCTTTGTCCTTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: ASTQQTLGDWNHAVDRFSHLEHG*LCPWRQ
Trigger: CTGTCTCCAAGGACAAAGCCATCCATGTTCTAGATG...GCTGAATCTATCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGTGTACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp TCACCTAATTATGCCAACCACCCAGGGTACGGGTGTAAACCCATTTCACAGACCACACGTCTTTCCAGTTaGCCCTGCTCCACATCTAGA +
Preference number: 4 (lower is better)
Translates to: SPNYANHPGYGCKPISQTTRLSS*PCSTSR
Trigger: TCTAGATGTGGAGCAGGGCCAACTGGAAAGACGTGT...GGTCTGTGAAATGGGTTTACACCCGTACCCTGGGTGGTTGGCATAATTAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp TCACCTAATTATGCCAACCACCCAGGGTACGGGTGTAAACCCATTTCACAGACCGGGCACCATGAGCCTTaGAAACACGTCTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SPNYANHPGYGCKPISQTGHHEP*KHVFPV
Trigger: AACTGGAAAGACGTGTTTCCAAGGCTCATGGTGCCC...GGTCTGTGAAATGGGTTTACACCCGTACCCTGGGTGGTTGGCATAATTAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp TCACCTAATTATGCCAACCACCCAGGGTACGGGTGTAAACCCATTTCACAGACCCAAAGCGGTCACTTGTaGCCCCAAAGCCATTCCAAT +
Preference number: 4 (lower is better)
Translates to: SPNYANHPGYGCKPISQTQSGHL*PQSHSN
Trigger: ATTGGAATGGCTTTGGGGCCACAAGTGACCGCTTTG...GGTCTGTGAAATGGGTTTACACCCGTACCCTGGGTGGTTGGCATAATTAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CCA 90 bp ACAGGCACCCTGGTGAGGACCCGTCTCAAGATTCAATTCATTCCTTCAGTCACTCAAAGCGGTCACTTGTaGCCCCAAAGCCATTCCAAT +
Preference number: 4 (lower is better)
Translates to: TGTLVRTRLKIQFIPSVTQSGHL*PQSHSN
Trigger: ATTGGAATGGCTTTGGGGCCACAAGTGACCGCTTTG...AGTGACTGAAGGAATGAATTGAATCTTGAGACGGGTCCTCACCAGGGTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR TCA 90 bp GGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATAGAGAAAACAATGTGGCTTACCTAAATTTGTaGCACTTCCCGAGCATTACC +
Preference number: 4 (lower is better)
Translates to: GATGYLLPPLQGNRENNVAYLNL*HFPSIT
Trigger: GGTAATGCTCGGGAAGTGTCACAAATTTAGGTAAGC...CACATTGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GGTGTAAACCCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCTTTATTGATTATTACTaGCAAAAACGGCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: GVNPFHRPLFTSPPTPARFIDYY*QKRPGT
Trigger: TGTACCTGGCCGTTTTTGCCAGTAATAATCAATAAA...GCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGGGTTTACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR TCA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCCCCAGACTGAGGTTCTaGGAGCAGCTCAAACCGACG +
Preference number: 4 (lower is better)
Translates to: QVFPVKISHYDGYEADKAPRLRF*EQLKPT
Trigger: CGTCGGTTTGAGCTGCTCTCAGAACCTCAGTCTGGG...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCCATGGTGCTGCTCACTaGTCCCTTCCACCACATTGC +
Preference number: 4 (lower is better)
Translates to: QVFPVKISHYDGYEADKAHGAAH*SLPPHC
Trigger: GCAATGTGGTGGAAGGGAGCAGTGAGCAGCACCATG...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR TCA 90 bp ACAGGCACCCTGGTGAGGACCCGTCTCAAGATTCAATTCATTCCTTCAGTCACTTCAAGGGAATCCAACTaGGCTTTTTACTACTATAGA +
Preference number: 4 (lower is better)
Translates to: TGTLVRTRLKIQFIPSVTSRESN*AFYYYR
Trigger: TCTATAGTAGTAAAAAGCTCAGTTGGATTCCCTTGA...AGTGACTGAAGGAATGAATTGAATCTTGAGACGGGTCCTCACCAGGGTGCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCTCCCTTCCACCACATTaGTGGTTGTCTTCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: QVFPVKISHYDGYEADKASLPPH*WLSSPV
Trigger: TACTGGGGAAGACAACCAGCAATGTGGTGGAAGGGA...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GGGAATCCAACTGAGCTTTTTACTACTATAGAATCTGTTTCCTCAGACTGTTATGACAGTAATGAGCTCTaGGGAAAAGGTGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GNPTELFTTIESVSSDCYDSNEL*GKGAQV
Trigger: GACCTGGGCACCTTTTCCCCAGAGCTCATTACTGTC...ATAACAGTCTGAGGAAACAGATTCTATAGTAGTAAAAAGCTCAGTTGGATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GGGAATCCAACTGAGCTTTTTACTACTATAGAATCTGTTTCCTCAGACTGTTATGGGCACCATGAGCCTTaGAAACACGTCTTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GNPTELFTTIESVSSDCYGHHEP*KHVFPV
Trigger: AACTGGAAAGACGTGTTTCCAAGGCTCATGGTGCCC...ATAACAGTCTGAGGAAACAGATTCTATAGTAGTAAAAAGCTCAGTTGGATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CCA 90 bp GGGAATCCAACTGAGCTTTTTACTACTATAGAATCTGTTTCCTCAGACTGTTATTCCACATCTAGAACATaGATGGCTTTGTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GNPTELFTTIESVSSDCYSTSRT*MALSLE
Trigger: CTCCAAGGACAAAGCCATCCATGTTCTAGATGTGGA...ATAACAGTCTGAGGAAACAGATTCTATAGTAGTAAAAAGCTCAGTTGGATTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506393.5
3UTR CAA 72 bp CCCTCAAGCTATGAGGAAACTGTTAGAGAAATTGATTaGCTCAAGGGAATCCAACTGAGCTTTTTACTACTA +
Preference number: 4 (lower is better)
Translates to: PSSYEETVREID*LKGIQLSFLLL
Trigger: TAGTAGTAAAAAGCTCAGTTGGATTCCCTTGAGCAAATCAATTTCTCTAACAGTTTCCTCATAGCTTGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358337.9
ENST00000506393.5
CDS-3UTR CAA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCCGTCCACCCTGCGGCTaGGGAGCTCCTCCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: ATPRYGSPSPSACPATPARPPCG*GAPPRE
Trigger: CTCCCGAGGAGGAGCTCCCAAGCCGCAGGGTGGACG...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCGAGGTGGGGGCGCGCTaGGCGATCCGCCATTCCAAC +
Preference number: 5 (lower is better)
Translates to: ATPRYGSPSPSACPATPAEVGAR*AIRHSN
Trigger: GTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTC...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS CCA 90 bp ACGTCCCCGTCCACGTCCCCTGCAGCCAGTAGGTCACGGGCCGGATaGAACGCCAGCCCACTAGCCGGAGCTTCCAGCACGATGTCTTCC +
Preference number: 5 (lower is better)
Translates to: TSPSTSPAASRSRAG*NASPLAGASSTMSS
Trigger: GGAAGACATCGTGCTGGAAGCTCCGGCTAGTGGGCTGGCGTTCCATCCGGCCCGTGACCTACTGGCTGCAGGGGACGTGGACGGGGACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358337.10
ENST00000506393.5
CDS-3UTR CAA 90 bp CTTGTGACCCTGAGGTTCTTGTCTCCAGCGTCCACCCTGCGGCTTGGGAGCTCCGGGCGGGGGTGCTGGTaGGGGCCAAACGCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LVTLRFLSPASTLRLGSSGRGCW*GPNAFC
Trigger: GCAGAACGCGTTTGGCCCCAACCAGCACCCCCGCCC...GGAGCTCCCAAGCCGCAGGGTGGACGCTGGAGACAAGAACCTCAGGGTCACAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS CCA 90 bp GTCTTCCGGAGTGTCCCGGATCCGGGTTGGGGCTTCCATGGAGTCTaGGTCCTCCTCGTCGCTCCCATCCTCAGCGGGCCTCTCCTCACA +
Preference number: 5 (lower is better)
Translates to: VFRSVPDPGWGFHGV*VLLVAPILSGPLLT
Trigger: TGTGAGGAGAGGCCCGCTGAGGATGGGAGCGACGAGGAGGACCCAGACTCCATGGAAGCCCCAACCCGGATCCGGGACACTCCGGAAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358337.10
ENST00000506393.5
CDS CCA 90 bp GCACGATGTCTTCCGGAGTGTCCCGGATCCGGGTTGGGGCTTCCATaGAGTCTGGGTCCTCCTCGTCGCTCCCATCCTCAGCGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: ARCLPECPGSGLGLP*SLGPPRRSHPQRAS
Trigger: AGAGGCCCGCTGAGGATGGGAGCGACGAGGAGGACCCAGACTCCATGGAAGCCCCAACCCGGATCCGGGACACTCCGGAAGACATCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358337.10
ENST00000506393.5
CDS-3UTR CAA 90 bp TCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTTCACCTAGGGCCCCGCACCAGTaGGAGCAGATGCCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: SSGGSPRTYAPATLQLSPRAPHQ*EQMPPH
Trigger: GTGGGGAGGCATCTGCTCCAACTGGTGCGGGGCCCT...AGGTGAAAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp TGTGGCTCCACGTCCACCCGCCCCGTCGAGGGAGGGGGCCAATCTCAAGGTGTATCGGTGCTCCAAGTCTaGCTGCTCAGAGCCCGCAGT +
Preference number: 5 (lower is better)
Translates to: CGSTSTRPVEGGGQSQGVSVLQV*LLRARS
Trigger: ACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCGA...TACACCTTGAGATTGGCCCCCTCCCTCGACGGGGCGGGTGGACGTGGAGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp GCCACCCCCAGGTACGGTAGTCCCAGCCCCTCCGCCTGTCCGGCTACACCAGCCCCATTTCACAGACCTTaGTTCACATCGCCTCCCACC +
Preference number: 5 (lower is better)
Translates to: ATPRYGSPSPSACPATPAPFHRP*FTSPPT
Trigger: GGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGG...GGCTGGTGTAGCCGGACAGGCGGAGGGGCTGGGACTACCGTACCTGGGGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp AGTACCACAGGAGAGGTGGGGGCGCGCTTGGCGATCCGCCATTCCAACCTTCCTCGCCTGACGGTGGCCTaGCATACCCTCTTCCCACAG +
Preference number: 5 (lower is better)
Translates to: STTGEVGARLAIRHSNLPRLTVA*HTLFPQ
Trigger: CTGTGGGAAGAGGGTATGCAAGGCCACCGTCAGGCG...AGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp AGTACCACAGGAGAGGTGGGGGCGCGCTTGGCGATCCGCCATTCCAACCTTCCTGGGCAAAGCGGTCACTaGTGGCCCCAAAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: STTGEVGARLAIRHSNLPGQSGH*WPQSHS
Trigger: GGAATGGCTTTGGGGCCACAAGTGACCGCTTTGCCC...AGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp AGCTCCTCCTCGGGAGGCAGCCCCCGTACATACGCACCCGCGACTTTGCAGCTTGCCATGTCCCAAAACTaGAGGCGCTGGTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: SSSSGGSPRTYAPATLQLAMSQN*RRWSWP
Trigger: TGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGC...AAGCTGCAAAGTCGCGGGTGCGTATGTACGGGGGCTGCCTCCCGAGGAGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp ATCCACCACCACAGCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGGTCGCCATGTCCCAAAACTaGAGGCGCTGGTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: IHHHSSQLGHVPKLEALVAMSQN*RRWSWP
Trigger: TGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGC...GACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGCTGTGGTGGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CAA 90 bp AGTACCACAGGAGAGGTGGGGGCGCGCTTGGCGATCCGCCATTCCAACCTTCCTTCTGTGCCAGCCCCCTaGTTAGCGCAGTCACCTAAT +
Preference number: 5 (lower is better)
Translates to: STTGEVGARLAIRHSNLPSVPAP*LAQSPN
Trigger: ATTAGGTGACTGCGCTAACAAGGGGGCTGGCACAGA...AGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp GCAGTCGATAGATTCAGCTCTCAGGGCAAAGCGGTCACTTGTGGCCCCAAAGCCGGGCAAAGCGGTCACTaGTGGCCCCAAAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: AVDRFSSQGKAVTCGPKAGQSGH*WPQSHS
Trigger: GGAATGGCTTTGGGGCCACAAGTGACCGCTTTGCCC...GGCTTTGGGGCCACAAGTGACCGCTTTGCCCTGAGAGCTGAATCTATCGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CAA 90 bp GCAGTCGATAGATTCAGCTCTCAGGGCAAAGCGGTCACTTGTGGCCCCAAAGCCTCACCACCTGGAGGCTaGGGCCCAGGGTTTAGACCT +
Preference number: 5 (lower is better)
Translates to: AVDRFSSQGKAVTCGPKASPPGG*GPGFRP
Trigger: AGGTCTAAACCCTGGGCCCAAGCCTCCAGGTGGTGA...GGCTTTGGGGCCACAAGTGACCGCTTTGCCCTGAGAGCTGAATCTATCGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS GCA 90 bp GGGGAGAGGGCAAGGAGGGTAAATGACTCCAGACCCAGCCTGGGTTaGATTGAGTGCAGAGACCAACTAGACAGAGCAGCCTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: GERARRVNDSRPSLG*IECRDQLDRAAFPP
Trigger: AGGTGGGAAGGCTGCTCTGTCTAGTTGGTCTCTGCACTCAATGCAACCCAGGCTGGGTCTGGAGTCATTTACCCTCCTTGCCCTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS-3UTR CAA 90 bp GCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGGTCATGGCCACTACTGCGACGCCTCTTAATGTaGAAGATGCCAAGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: ARSWAMSQNLRRWSWPLLRRLLM*KMPRQP
Trigger: TGGCTGCCTTGGCATCTTCAACATTAAGAGGCGTCG...CAGTAGTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CAA 90 bp GGTGTAAACCCATTTCACAGACCTTTGTTCACATCGCCTCCCACCCCCGCGCGCTACGCACCCGCGACTTaGCAGCTTTCACCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: GVNPFHRPLFTSPPTPARYAPAT*QLSPEG
Trigger: ACCTTCAGGTGAAAGCTGCAAAGTCGCGGGTGCGTA...GCGCGCGGGGGTGGGAGGCGATGTGAACAAAGGTCTGTGAAATGGGTTTACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp AGTACCACAGGAGAGGTGGGGGCGCGCTTGGCGATCCGCCATTCCAACCTTCCTTGGATGGCTTTGTCCTaGGAGACAGTAATGAGCTTC +
Preference number: 5 (lower is better)
Translates to: STTGEVGARLAIRHSNLPWMALS*ETVMSF
Trigger: GAAGCTCATTACTGTCTCCAAGGACAAAGCCATCCA...AGGAAGGTTGGAATGGCGGATCGCCAAGCGCGCCCCCACCTCTCCTGTGGTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp GCCAGTACACAGCAGACTCTCGGTGACTGGAACCATGCAGTCGATAGATTCAGCTCGGTGCTCCAAGTCTaGCTGCTCAGAGCCCGCAGT +
Preference number: 5 (lower is better)
Translates to: ASTQQTLGDWNHAVDRFSSVLQV*LLRARS
Trigger: ACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCGA...GCTGAATCTATCGACTGCATGGTTCCAGTCACCGAGAGTCTGCTGTGTACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CAA 90 bp GAGGCCGGTGGGGAGGAAGTTATAAAGAGGGTACGAGGGGGCCAGCTGGAGAGCAGAACATGGATGGCTTaGTCCTTGGAGACAGTAATG +
Preference number: 5 (lower is better)
Translates to: EAGGEEVIKRVRGGQLESRTWMA*SLETVM
Trigger: CATTACTGTCTCCAAGGACAAAGCCATCCATGTTCT...GCTCTCCAGCTGGCCCCCTCGTACCCTCTTTATAACTTCCTCCCCACCGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp AAGAAGTCATCGGTGCTCCAAGTCTTGCTGCTCAGAGCCCGCAGTGGTCCTCCCGACCTGCCCTTGTCTTaGCATTTTTCCTACAGGGCA +
Preference number: 5 (lower is better)
Translates to: KKSSVLQVLLLRARSGPPDLPLS*HFSYRA
Trigger: TGCCCTGTAGGAAAAATGCAAAGACAAGGGCAGGTC...GGGAGGACCACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCGATGACTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CAA 90 bp GCTCGCAGCTGGGCCATGTCCCAAAACTTGAGGCGCTGGTCATGGCCACTACTGTGGATGGCTTTGTCCTaGGAGACAGTAATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: ARSWAMSQNLRRWSWPLLWMALS*ETVMSS
Trigger: AGAGCTCATTACTGTCTCCAAGGACAAAGCCATCCA...CAGTAGTGGCCATGACCAGCGCCTCAAGTTTTGGGACATGGCCCAGCTGCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CAA 90 bp TGCTGGTTGGGGCCAAACGCGTTCTGCCCGGCACTTTATACTGAGCATAGCAAGCGACGCCTCTTAATGTaGAAGATGCCAAGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: CWLGPNAFCPALYTEHSKRRLLM*KMPRQP
Trigger: TGGCTGCCTTGGCATCTTCAACATTAAGAGGCGTCG...CTTGCTATGCTCAGTATAAAGTGCCGGGCAGAACGCGTTTGGCCCCAACCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp AAGAAGTCATCGGTGCTCCAAGTCTTGCTGCTCAGAGCCCGCAGTGGTCCTCCCAGGCTGAAGGCTTCATaGTCTTTTCTTACCCATGGT +
Preference number: 5 (lower is better)
Translates to: KKSSVLQVLLLRARSGPPRLKAS*SFLTHG
Trigger: ACCATGGGTAAGAAAAGACAATGAAGCCTTCAGCCT...GGGAGGACCACTGCGGGCTCTGAGCAGCAAGACTTGGAGCACCGATGACTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS TCA 90 bp TTCTTCCCCCATTTCATGAGAGTGACAGAGGTCAGGTCCCCAGACTaGGGTTCTGAGAGCAGCTCAAACCGACGCCTCTTAATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: FFPHFMRVTEVRSPD*GSESSSNRRLLMLK
Trigger: CTTCAACATTAAGAGGCGTCGGTTTGAGCTGCTCTCAGAACCTCAGTCTGGGGACCTGACCTCTGTCACTCTCATGAAATGGGGGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358337.10
ENST00000504897.2
ENST00000511232.5
CDS-3UTR CAA 90 bp TCACCTAATTATGCCAACCACCCAGGGTACGGGTGTAAACCCATTTCACAGACCGATGACCAGAGCTCCTaGGTTTCTCCCTCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: SPNYANHPGYGCKPISQTDDQSS*VSPSWQ
Trigger: TTGCCAAGAGGGAGAAACCAAGGAGCTCTGGTCATC...GGTCTGTGAAATGGGTTTACACCCGTACCCTGGGTGGTTGGCATAATTAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504897.2
CDS-3UTR CAA 90 bp ACAGGCACCCTGGTGAGGACCCGTCTCAAGATTCAATTCATTCCTTCAGTCACTGATGACCAGAGCTCCTaGGTTTCTCCCTCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: TGTLVRTRLKIQFIPSVTDDQSS*VSPSWQ
Trigger: TTGCCAAGAGGGAGAAACCAAGGAGCTCTGGTCATC...AGTGACTGAAGGAATGAATTGAATCTTGAGACGGGTCCTCACCAGGGTGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCTGTCCCGGATCCGGGTaGGGGCTTCCATGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: QVFPVKISHYDGYEADKACPGSG*GLPWSL
Trigger: CAGACTCCATGGAAGCCCCAACCCGGATCCGGGACA...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CAA 90 bp GGAGCCACAGGCTACCTTCTTCCCCCACTGCAGGGAAATAGAGAAAACAATGTGCTTGGTTTCTCCCTCTaGGCAAGAGTAGGAAAAGAC +
Preference number: 5 (lower is better)
Translates to: GATGYLLPPLQGNRENNVLGFSL*ARVGKD
Trigger: GTCTTTTCCTACTCTTGCCAAGAGGGAGAAACCAAG...CACATTGTTTTCTCTATTTCCCTGCAGTGGGGGAAGAAGGTAGCCTGTGGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS TCA 90 bp TATCCTCTCTGGGGATGCAGCCCAATAAGCAAGACTCTTGCCTGGTaGGGACCCGTCTCAAGATTCAATTCATTCCTTCAGTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: YPLWGCSPISKTLAW*GPVSRFNSFLQSLS
Trigger: TGACAGTGACTGAAGGAATGAATTGAATCTTGAGACGGGTCCTCACCAGGCAAGAGTCTTGCTTATTGGGCTGCATCCCCAGAGAGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358337.10
CDS CCA 90 bp GTGATCCCACCCAACCCCTCTTTATCATCTTTGAAAGCCCCAGCCTaGACAAAGATTGGGTCTGGACCACTGTGGAGGAGATATTTGTTA +
Preference number: 5 (lower is better)
Translates to: VIPPNPSLSSLKAPA*TKIGSGPLWRRYLL
Trigger: TAACAAATATCTCCTCCACAGTGGTCCAGACCCAATCTTTGTCCAGGCTGGGGCTTTCAAAGATGATAAAGAGGGGTTGGGTGGGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAGTAAAGATTAGCCATTATGATGGTTATGAGGCAGACAAAGCCCTCCCTTCCACCACATaGCTGGTTGTCTTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: QVFPVKISHYDGYEADKALPSTT*LVVFPS
Trigger: ACTGGGGAAGACAACCAGCAATGTGGTGGAAGGGAG...GGCTTTGTCTGCCTCATAACCATCATAATGGCTAATCTTTACTGGGAAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS TCA 90 bp ATGACTGAATCTAGAAAGATGGGCTGGGGTGGGCATGAGACCACATaGGCCAAGCAGAAGTTTGAATTTAATCCTCGGAAAAGGAACCTT +
Preference number: 5 (lower is better)
Translates to: MTESRKMGWGGHETT*AKQKFEFNPRKRNL
Trigger: AAGGTTCCTTTTCCGAGGATTAAATTCAAACTTCTGCTTGGCTCATGTGGTCTCATGCCCACCCCAGCCCATCTTTCTAGATTCAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS CCA 90 bp CAACCCCTCTTTATCATCTTTGAAAGCCCCAGCCTGGACAAAGATTaGGTCTGGACCACTGTGGAGGAGATATTTGTTACATCAATGACA +
Preference number: 5 (lower is better)
Translates to: QPLFIIFESPSLDKD*VWTTVEEIFVTSMT
Trigger: TGTCATTGATGTAACAAATATCTCCTCCACAGTGGTCCAGACCCAATCTTTGTCCAGGCTGGGGCTTTCAAAGATGATAAAGAGGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS-3UTR CAA 90 bp ACAGGCACCCTGGTGAGGACCCGTCTCAAGATTCAATTCATTCCTTCAGTCACTGTTAGAGAAATTGATTaGCTCAAGGGAATCCAACTG +
Preference number: 5 (lower is better)
Translates to: TGTLVRTRLKIQFIPSVTVREID*LKGIQL
Trigger: CAGTTGGATTCCCTTGAGCAAATCAATTTCTCTAAC...AGTGACTGAAGGAATGAATTGAATCTTGAGACGGGTCCTCACCAGGGTGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS GCA 90 bp AACAACTTTGAGGTGAGTACTGTTTATGGAATACCCCCAAGTGCCTaGCTCAGAGCAGATCCTCAAAAAGGGCAGAATGAATACATGCTT +
Preference number: 5 (lower is better)
Translates to: NNFEVSTVYGIPPSA*LRADPQKGQNEYML
Trigger: AAGCATGTATTCATTCTGCCCTTTTTGAGGATCTGCTCTGAGGCAGGCACTTGGGGGTATTCCATAAACAGTACTCACCTCAAAGTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS CCA 90 bp CTCTTTATCATCTTTGAAAGCCCCAGCCTGGACAAAGATTGGGTCTaGACCACTGTGGAGGAGATATTTGTTACATCAATGACAAAAGAC +
Preference number: 5 (lower is better)
Translates to: LFIIFESPSLDKDWV*TTVEEIFVTSMTKD
Trigger: GTCTTTTGTCATTGATGTAACAAATATCTCCTCCACAGTGGTCCAGACCCAATCTTTGTCCAGGCTGGGGCTTTCAAAGATGATAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS-3UTR CAA 90 bp CCTTTGCAAATAATGGAGGCTGAAGGCTTCATTGTCTTTTCTTACCCATGGTCAAGAACATGGATGGCTTaGTCCTTGGAGACAGTAATG +
Preference number: 5 (lower is better)
Translates to: PLQIMEAEGFIVFSYPWSRTWMA*SLETVM
Trigger: CATTACTGTCTCCAAGGACAAAGCCATCCATGTTCT...TGACCATGGGTAAGAAAAGACAATGAAGCCTTCAGCCTCCATTATTTGCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CAA 90 bp ATTTGTGACACTTCCCGAGCATTACCTCCTGACTTAATTCTCAACCTTCCCCCATGTGTTATACTCCCTTaGCAAATAATGGAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: ICDTSRALPPDLILNLPPCVILP*QIMEAE
Trigger: TTCAGCCTCCATTATTTGCAAAGGGAGTATAACACA...TGGGGGAAGGTTGAGAATTAAGTCAGGAGGTAATGCTCGGGAAGTGTCACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS-3UTR CAA 90 bp ATTTGTGACACTTCCCGAGCATTACCTCCTGACTTAATTCTCAACCTTCCCCCAAAACTGTTAGAGAAATaGATTTGCTCAAGGGAATCC +
Preference number: 5 (lower is better)
Translates to: ICDTSRALPPDLILNLPPKLLEK*ICSRES
Trigger: GGATTCCCTTGAGCAAATCAATTTCTCTAACAGTTT...TGGGGGAAGGTTGAGAATTAAGTCAGGAGGTAATGCTCGGGAAGTGTCACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS TCA 72 bp CCTCAGCGGGCCTCTCCTCACAAGTGCGGTCCATGCTaGGAAGGACTGCGAGCCGCGCCGCCGCAGGGTAGT +
Preference number: 6 (lower is better)
Translates to: PQRASPHKCGPC*EGLRAAPPQGS
Trigger: ACTACCCTGCGGCGGCGCGGCTCGCAGTCCTTCTCAGCATGGACCGCACTTGTGAGGAGAGGCCCGCTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506393.5
CDS CCA 72 bp TCCACGTCCCCTGCAGCCAGTAGGTCACGGGCCGGATaGAACGCCAGCCCACTAGCCGGAGCTTCCAGCACG +
Preference number: 6 (lower is better)
Translates to: STSPAASRSRAG*NASPLAGASST
Trigger: CGTGCTGGAAGCTCCGGCTAGTGGGCTGGCGTTCCATCCGGCCCGTGACCTACTGGCTGCAGGGGACGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358337.10
ENST00000506393.5
CDS CCA 72 bp AGTGTCCCGGATCCGGGTTGGGGCTTCCATGGAGTCTaGGTCCTCCTCGTCGCTCCCATCCTCAGCGGGCCT +
Preference number: 6 (lower is better)
Translates to: SVPDPGWGFHGV*VLLVAPILSGP
Trigger: AGGCCCGCTGAGGATGGGAGCGACGAGGAGGACCCAGACTCCATGGAAGCCCCAACCCGGATCCGGGACACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358337.10
ENST00000506393.5
CDS CAA 90 bp CCGGAGCTTCCAGCACGATGTCTTCCGGAGTGTCCCGGATCCGGGTaGGGGCTTCCATGGAGTCTGGGTCCTCCTCGTCGCTCCCATCCT +
Preference number: 6 (lower is better)
Translates to: PELPARCLPECPGSG*GLPWSLGPPRRSHP
Trigger: AGGATGGGAGCGACGAGGAGGACCCAGACTCCATGGAAGCCCCAACCCGGATCCGGGACACTCCGGAAGACATCGTGCTGGAAGCTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358337.10
ENST00000506393.5
CDS GCA 72 bp GCAAGGAGGGTAAATGACTCCAGACCCAGCCTGGGTTaGATTGAGTGCAGAGACCAACTAGACAGAGCAGCC +
Preference number: 6 (lower is better)
Translates to: ARRVNDSRPSLG*IECRDQLDRAA
Trigger: GGCTGCTCTGTCTAGTTGGTCTCTGCACTCAATGCAACCCAGGCTGGGTCTGGAGTCATTTACCCTCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS TCA 72 bp CATTTCATGAGAGTGACAGAGGTCAGGTCCCCAGACTaGGGTTCTGAGAGCAGCTCAAACCGACGCCTCTTA +
Preference number: 6 (lower is better)
Translates to: HFMRVTEVRSPD*GSESSSNRRLL
Trigger: TAAGAGGCGTCGGTTTGAGCTGCTCTCAGAACCTCAGTCTGGGGACCTGACCTCTGTCACTCTCATGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358337.10
ENST00000504897.2
ENST00000511232.5
ENST00000520764.1
CDS TCA 72 bp GGAGGTGGGGGAGAGGCACCAGCCTGTAAACAACTTTaGGGTGAGTACTGTTTATGGAATACCCCCAAGTGC +
Preference number: 6 (lower is better)
Translates to: GGGGEAPACKQL*GEYCLWNTPKC
Trigger: GCACTTGGGGGTATTCCATAAACAGTACTCACCTCAAAGTTGTTTACAGGCTGGTGCCTCTCCCCCACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS CCA 72 bp ATGGATGGCTTTGTCCTTGGAGACAGTAATGAGCTCTaGGGAAAAGGTGCCCAGGTCATGGTGCTGCTCACT +
Preference number: 6 (lower is better)
Translates to: MDGFVLGDSNEL*GKGAQVMVLLT
Trigger: AGTGAGCAGCACCATGACCTGGGCACCTTTTCCCCAGAGCTCATTACTGTCTCCAAGGACAAAGCCATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506393.5
ENST00000511232.5
CDS CCA 72 bp CCCAACCCCTCTTTATCATCTTTGAAAGCCCCAGCCTaGACAAAGATTGGGTCTGGACCACTGTGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: PNPSLSSLKAPA*TKIGSGPLWRR
Trigger: TCTCCTCCACAGTGGTCCAGACCCAATCTTTGTCCAGGCTGGGGCTTTCAAAGATGATAAAGAGGGGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS CAA 90 bp CGTCTTTCCAGTTGGCCCTGCTCCACATCTAGAACATGGATGGCTTaGTCCTTGGAGACAGTAATGAGCTTCTGCCCATCTTCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: RLSSWPCSTSRTWMA*SLETVMSFCPSSEK
Trigger: CTTCTCTGAAGATGGGCAGAAGCTCATTACTGTCTCCAAGGACAAAGCCATCCATGTTCTAGATGTGGAGCAGGGCCAACTGGAAAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358337.10
ENST00000504897.2
CDS TCA 72 bp TGGGGATGCAGCCCAATAAGCAAGACTCTTGCCTGGTaGGGACCCGTCTCAAGATTCAATTCATTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: WGCSPISKTLAW*GPVSRFNSFLQ
Trigger: CTGAAGGAATGAATTGAATCTTGAGACGGGTCCTCACCAGGCAAGAGTCTTGCTTATTGGGCTGCATCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358337.10
CDS CAA 72 bp CCCTGCTCCACATCTAGAACATGGATGGCTTTGTCCTaGGAGACAGTAATGAGCTTCTGCCCATCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: PCSTSRTWMALS*ETVMSFCPSSE
Trigger: CTCTGAAGATGGGCAGAAGCTCATTACTGTCTCCAAGGACAAAGCCATCCATGTTCTAGATGTGGAGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358337.10
ENST00000504897.2
CDS CAA 72 bp AGTTGGCCCTGCTCCACATCTAGAACATGGATGGCTTaGTCCTTGGAGACAGTAATGAGCTTCTGCCCATCT +
Preference number: 6 (lower is better)
Translates to: SWPCSTSRTWMA*SLETVMSFCPS
Trigger: AGATGGGCAGAAGCTCATTACTGTCTCCAAGGACAAAGCCATCCATGTTCTAGATGTGGAGCAGGGCCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358337.10
ENST00000504897.2
CDS CAA 72 bp AGAGAGCCCTGGAAAGCTAAGGTGGTGACATGTGGGTaGGATCATACAAGAGTAGAATTTGCCTGGCAGAGA +
Preference number: 6 (lower is better)
Translates to: REPWKAKVVTCG*DHTRVEFAWQR
Trigger: TCTCTGCCAGGCAAATTCTACTCTTGTATGATCCAACCCACATGTCACCACCTTAGCTTTCCAGGGCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS CCA 72 bp ATCTTTGAAAGCCCCAGCCTGGACAAAGATTGGGTCTaGACCACTGTGGAGGAGATATTTGTTACATCAATG +
Preference number: 6 (lower is better)
Translates to: IFESPSLDKDWV*TTVEEIFVTSM
Trigger: CATTGATGTAACAAATATCTCCTCCACAGTGGTCCAGACCCAATCTTTGTCCAGGCTGGGGCTTTCAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS CCA 72 bp TTTATCATCTTTGAAAGCCCCAGCCTGGACAAAGATTaGGTCTGGACCACTGTGGAGGAGATATTTGTTACA +
Preference number: 6 (lower is better)
Translates to: FIIFESPSLDKD*VWTTVEEIFVT
Trigger: TGTAACAAATATCTCCTCCACAGTGGTCCAGACCCAATCTTTGTCCAGGCTGGGGCTTTCAAAGATGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511232.5
CDS CAA 72 bp AAAAGGTATTTCTCTGTGAGGCAAGGTCAAAGACGTTaGAAAAACATTAGTGAAGGAGACAGCATTCAAATA +
Preference number: 6 (lower is better)
Translates to: KRYFSVRQGQRR*KNISEGDSIQI
Trigger: TATTTGAATGCTGTCTCCTTCACTAATGTTTTTCAAACGTCTTTGACCTTGCCTCACAGAGAAATACCTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511232.5