Pregenerated sensors for WDR45 (Homo sapiens)
Ensembl gene IDs: ENSG00000196998Ensembl transcript IDs: ENST00000376357.1, ENST00000376368.7, ENST00000376372.9, ENST00000396681.9, ENST00000460501.2, ENST00000465382.6, ENST00000465431.6, ENST00000465806.6, ENST00000471338.6, ENST00000475977.2, ENST00000485908.6, ENST00000496803.6, ENST00000634390.1, ENST00000634465.1, ENST00000634711.1, ENST00000634838.1, ENST00000634908.1, ENST00000634944.1, ENST00000635003.1, ENST00000635344.1, ENST00000636049.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTCTGCAGTTCTGCCACTaGAGGTCCCTAGCACAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVLQFCH*RSLAQP Trigger: GGGCTGTGCTAGGGACCTGCAGTGGCAGAACTGCAG...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000376372.9 ENST00000475977.2 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| 3UTR-3UTR GCA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGCTGCAGTTCTGCCACTaGAGGTCCCTAGCACAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQLQFCH*RSLAQP Trigger: GGGCTGTGCTAGGGACCTGCAGTGGCAGAACTGCAG...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000376372.9 ENST00000475977.2 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| 3UTR-3UTR GCA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCTGCAGTTCTGCCACTaGAGGTCCCTAGCACAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLLQFCH*RSLAQP Trigger: GGGCTGTGCTAGGGACCTGCAGTGGCAGAACTGCAG...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000376372.9 ENST00000475977.2 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR GCA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGGCCCCAGCTGTCGGTaGCGCCCGCGGCCCGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQGPSCR*RPRPGF Trigger: AAAACCGGGCCGCGGGCGGCACCGACAGCTGGGGCC...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR TCA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGCGCGGCCCGGTTTTCTaGCCTCCCGGGCCTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQRGPVF*PPGPWS Trigger: GCTCCAAGGCCCGGGAGGTCAGAAAACCGGGCCGCG...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTGGAGCGGAGGAAGGTTaGCTGGGGGACCGGAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVGAEEG*LGDRRR Trigger: TCGCCTCCGGTCCCCCAGCCAACCTTCCTCCGCTCC...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000634944.1 |
||
| CDS-3UTR TCA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTTCGGAGCATCGCGAGTaGCAGTGGGGTTCTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVSEHRE*QWGSPG Trigger: CCCCGGAGAACCCCACTGTCACTCGCGATGCTCCGA...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634944.1 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCGGCCCCAGCTGTCGGTaGCGCCCGCGGCCCGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLGPSCR*RPRPGF Trigger: AAAACCGGGCCGCGGGCGGCACCGACAGCTGGGGCC...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTCCCATGCTGCCCACCTaGTCGTGGTCCAGATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVPMLPT*SWSRCP Trigger: GGGGCATCTGGACCACGAGCAGGTGGGCAGCATGGG...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR TCA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCGCGGCCCGGTTTTCTaGCCTCCCGGGCCTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLRGPVF*PPGPWS Trigger: GCTCCAAGGCCCGGGAGGTCAGAAAACCGGGCCGCG...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 |
||
| CDS-3UTR GCA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGCCCATGCTGCCCACCTaGTCGTGGTCCAGATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQPMLPT*SWSRCP Trigger: GGGGCATCTGGACCACGAGCAGGTGGGCAGCATGGG...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTCCACCAAGCCCATGCTaGCCACCTGCTCGTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVPPSPC*PPARGP Trigger: TGGACCACGAGCAGGTGGGCAGCATGGGCTTGGTGG...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR CCA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGCTGCCCACCTGCTCGTaGTCCAGATGCCCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQLPTCS*SRCPFS Trigger: GGAGAAGGGGCATCTGGACCACGAGCAGGTGGGCAG...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR CCA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCGGAGGAAGGTTGGCTaGGGGACCGGAGGCGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLRRKVG*GTGGEG Trigger: CCCTTCGCCTCCGGTCCCCCAGCCAACCTTCCTCCG...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000634944.1 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTTGCTCGTGGTCCAGATaGCCCTTCTCCATCAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVCSWSR*PFSIKG Trigger: GCCCTTGATGGAGAAGGGGCATCTGGACCACGAGCA...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCCCATGCTGCCCACCTaGTCGTGGTCCAGATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLPMLPT*SWSRCP Trigger: GGGGCATCTGGACCACGAGCAGGTGGGCAGCATGGG...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTGGTCACAGAGCCCCTTaGGGTTGTCCCGGGTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVGHRAP*GCPGYQ Trigger: TTGATACCCGGGACAACCCCAAGGGGCTCTGTGACC...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 |
||
| CDS-3UTR CCA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGATGACTCACCCCAGCTaGAAAAAGGCGGCCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQMTHPS*KKAATA Trigger: GGCGGTGGCCGCCTTTTTCCAGCTGGGGTGAGTCAT...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000634944.1 |
||
| CDS-3UTR TCA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTGCCTGTCGCAGGAAATaGCTCACCCCAGCTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVACRRK*LTPAGK Trigger: TTTTCCAGCTGGGGTGAGTCATTTCCTGCGACAGGC...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634944.1 |
||
| CDS-3UTR GCA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGTGCTCGTGGTCCAGATaGCCCTTCTCCATCAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQCSWSR*PFSIKG Trigger: GCCCTTGATGGAGAAGGGGCATCTGGACCACGAGCA...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCCACCAAGCCCATGCTaGCCACCTGCTCGTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLPPSPC*PPARGP Trigger: TGGACCACGAGCAGGTGGGCAGCATGGGCTTGGTGG...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTCAGGATTGTTCCTCCTaGGATCGTGCTCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVQDCSS*DRAPAS Trigger: GGAAGCTGGAGCACGATCCCAGGAGGAACAATCCTG...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000635003.1 |
||
| CDS-3UTR CCA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGGTCACAGAGCCCCTTaGGGTTGTCCCGGGTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQGHRAP*GCPGYQ Trigger: TTGATACCCGGGACAACCCCAAGGGGCTCTGTGACC...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 |
||
| CDS-3UTR TCA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCGCAGGATTGTTCCTCTaGCCTCCGCGTGTCCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLAGLFL*PPRVPD Trigger: GTCAGGGACACGCGGAGGTCAGAGGAACAATCCTGC...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000634944.1 |
||
| CDS-3UTR CCA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGCAGGATTGTTCCTCCTaGGATCGTGCTCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQQDCSS*DRAPAS Trigger: GGAAGCTGGAGCACGATCCCAGGAGGAACAATCCTG...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000635003.1 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCTGCTCGTGGTCCAGATaGCCCTTCTCCATCAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLCSWSR*PFSIKG Trigger: GCCCTTGATGGAGAAGGGGCATCTGGACCACGAGCA...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR CCA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGTGCATTGATCGTGAATaGAGCAGACGAGGTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQCIDRE*SRRGAR Trigger: CCTGGCACCTCGTCTGCTCCATTCACGATCAATGCA...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000376372.9 ENST00000475977.2 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTCAGCAAAAGCAGCTTTaGTCTTGGTTGAAACGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVQQKQL*SWLKRR Trigger: CCTGCGTTTCAACCAAGACCAAAGCTGCTTTTGCTG...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR CCA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGCAGCAAAAGCAGCTTTaGTCTTGGTTGAAACGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQQQKQL*SWLKRR Trigger: CCTGCGTTTCAACCAAGACCAAAGCTGCTTTTGCTG...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR CCA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCTGCATTGATCGTGAATaGAGCAGACGAGGTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLCIDRE*SRRGAR Trigger: CCTGGCACCTCGTCTGCTCCATTCACGATCAATGCA...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000376372.9 ENST00000475977.2 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS CCA 90 bp | CCCACCTGCTCGTGGTCTGGACAGGGACCAGGGTGTCAGTGGAGGTaGGAGCCAACGCCCAGCCCAGCTCTTCTGCCCATTGCCCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PTCSWSGQGPGCQWR*EPTPSPALLPIAPP Trigger: GGGAGGGGCAATGGGCAGAAGAGCTGGGCTGGGCGTTGGCTCCCACCTCCACTGACACCCTGGTCCCTGTCCAGACCACGAGCAGGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465806.6 ENST00000634711.1 |
||
| CDS CCA 90 bp | ATGCTGCCCACCTGCTCGTGGTCTGGACAGGGACCAGGGTGTCAGTaGAGGTGGGAGCCAACGCCCAGCCCAGCTCTTCTGCCCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MLPTCSWSGQGPGCQ*RWEPTPSPALLPIA Trigger: GGCAATGGGCAGAAGAGCTGGGCTGGGCGTTGGCTCCCACCTCCACTGACACCCTGGTCCCTGTCCAGACCACGAGCAGGTGGGCAGCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465806.6 ENST00000634711.1 |
||
| CDS-3UTR CAA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGCTGACCTCCCGGGCCTaGGAGCCCGGCTCGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQLTSRA*EPGSGV Trigger: AACACCCGAGCCGGGCTCCAAGGCCCGGGAGGTCAG...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376372.9 ENST00000634944.1 |
||
| CDS CCA 90 bp | GCAAAGCGAAACCGGCCAAGCCCTCAGCCCCTTGGTCACCCACAATaGGGGAGTAAACCTTCCCTGCTAACAAGACGCGGACCTCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AKRNRPSPQPLGHPQ*GSKPSLLTRRGPPR Trigger: CCGCGGAGGTCCGCGTCTTGTTAGCAGGGAAGGTTTACTCCCCCATTGTGGGTGACCAAGGGGCTGAGGGCTTGGCCGGTTTCGCTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000460501.2 ENST00000465382.6 ENST00000634908.1 |
||
| CDS-3UTR CAA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCTGACCTCCCGGGCCTaGGAGCCCGGCTCGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLLTSRA*EPGSGV Trigger: AACACCCGAGCCGGGCTCCAAGGCCCGGGAGGTCAG...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000376372.9 ENST00000634944.1 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTAGGTCACAGAGCCCCTaGGGGTTGTCCCGGGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVRSQSP*GLSRVS Trigger: TGATACCCGGGACAACCCCAAGGGGCTCTGTGACCT...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 |
||
| CDS CCA 90 bp | CCAGTACCTTGGGGTGCCTGTGGGAGGCCAGGAATCCGAGAAATCTaGGCCAAAGGGCAGGATGAGGGCACTTACCTGAGATCTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PVPWGACGRPGIREI*AKGQDEGTYLRSLR Trigger: TCTCAGAGATCTCAGGTAAGTGCCCTCATCCTGCCCTTTGGCCCAGATTTCTCGGATTCCTGGCCTCCCACAGGCACCCCAAGGTACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000376357.1 ENST00000465806.6 ENST00000496803.6 ENST00000634390.1 ENST00000634711.1 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTAGTCATGGTGCAGGATaGTTCCTCCTGGGATCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVSHGAG*FLLGSC Trigger: GCACGATCCCAGGAGGAACAATCCTGCACCATGACT...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000635003.1 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTAGCACGATCACGATCTaGTCATGGCGCATGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVSTITI*SWRMRT Trigger: TGTGCGCATGCGCCATGACAAGATCGTGATCGTGCT...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 |
||
| CDS TCA 90 bp | ATTTCTGCCTCCAGGGTCCTAGTCCATGCACCCTGGAGATTTCCGTaGGGAATCCTAGGGCTCTGTGACTCACCTAGGGCAACTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISASRVLVHAPWRFP*GILGLCDSPRATPA Trigger: GGCAGGAGTTGCCCTAGGTGAGTCACAGAGCCCTAGGATTCCTCACGGAAATCTCCAGGGTGCATGGACTAGGACCCTGGAGGCAGAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000465431.6 ENST00000465806.6 ENST00000634465.1 ENST00000634711.1 |
||
| CDS-3UTR CAA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCAGGTCACAGAGCCCCTaGGGGTTGTCCCGGGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLRSQSP*GLSRVS Trigger: TGATACCCGGGACAACCCCAAGGGGCTCTGTGACCT...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 |
||
| CDS GCA 90 bp | AGGCCTCCTCTCTGTGTGACTCTGAAGTACTCTGACGTCTTCATCTaGCAGTACCTTGGGGTGCCTGTGGGAGGCCAGGAATCCGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RPPLCVTLKYSDVFI*QYLGVPVGGQESEK Trigger: TTTCTCGGATTCCTGGCCTCCCACAGGCACCCCAAGGTACTGGCAGATGAAGACGTCAGAGTACTTCAGAGTCACACAGAGAGGAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376357.1 ENST00000465806.6 ENST00000496803.6 ENST00000634711.1 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGTTGCAGCAAAAGCAGCTTaGGTCTTGGTTGAAACGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PQVGLGHSLWVPGNFLQVAAKAA*VLVETQ Trigger: CTGCGTTTCAACCAAGACCAAAGCTGCTTTTGCTGC...AACCTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR CAA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCAGTCATGGTGCAGGATaGTTCCTCCTGGGATCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLSHGAG*FLLGSC Trigger: GCACGATCCCAGGAGGAACAATCCTGCACCATGACT...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000635003.1 |
||
| CDS-3UTR CAA 90 bp | AATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCCAGGCAGCAAAAGCAGCTTaGGTCTTGGTTGAAACGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NPQVGLGHSLWVPGNFLQAAKAA*VLVETQ Trigger: CTGCGTTTCAACCAAGACCAAAGCTGCTTTTGCTGC...CTGGAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR CAA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCAGCACGATCACGATCTaGTCATGGCGCATGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLSTITI*SWRMRT Trigger: TGTGCGCATGCGCCATGACAAGATCGTGATCGTGCT...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 |
||
| CDS-3UTR CAA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCTCCTCGAAGTGGCTGTaGAGTCATGGTGCAGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLSSKWL*SHGAGL Trigger: CAATCCTGCACCATGACTCAACAGCCACTTCGAGGA...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS-3UTR CAA 90 bp | AAAAATCCCCAGGTTGGATTAGGGCACTCCCTCTGGGTCCCTGGCAATTTCCTCGCAGCAAAAGCAGCTTaGGTCTTGGTTGAAACGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KNPQVGLGHSLWVPGNFLAAKAA*VLVETQ Trigger: CTGCGTTTCAACCAAGACCAAAGCTGCTTTTGCTGC...GAGGAAATTGCCAGGGACCCAGAGGGAGTGCCCTAATCCAACCTGGGGATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000376372.9 ENST00000634838.1 ENST00000634944.1 ENST00000635003.1 |
||
| CDS TCA 90 bp | CCAGGGACCTCAACCTACTTGCTTAGCCTTTCAATAAACAACCAGTaGGATCCTCGCACAGCACGAGCACTTGTGGATATGATCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGTSTYLLSLSINNQ*DPRTARALVDMIPE Trigger: CTCAGGGATCATATCCACAAGTGCTCGTGCTGTGCGAGGATCTCACTGGTTGTTTATTGAAAGGCTAAGCAAGTAGGTTGAGGTCCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000465431.6 ENST00000465806.6 ENST00000634465.1 |
||
| CDS CCA 90 bp | TGCCTTGTCCAGATGGGATCATCAAGAAAAACCCTTAAAGTAAGATaGCACTTGAGGCTCAAGCCAAGGGGGTATTGGGAAGACGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLVQMGSSRKTLKVR*HLRLKPRGYWEDGS Trigger: GGAGCCGTCTTCCCAATACCCCCTTGGCTTGAGCCTCAAGTGCCATCTTACTTTAAGGGTTTTTCTTGATGATCCCATCTGGACAAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000465431.6 ENST00000465806.6 ENST00000496803.6 ENST00000634465.1 ENST00000634711.1 |
||
| CDS TCA 90 bp | CCAGTGAGATCCTCGCACAGCACGAGCACTTGTGGATATGATCCCTaGGAGGAGTGTTCTAGACTGTTACACTCATCTACAGATGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PVRSSHSTSTCGYDP*EECSRLLHSSTDEE Trigger: TTCCTCATCTGTAGATGAGTGTAACAGTCTAGAACACTCCTCTCAGGGATCATATCCACAAGTGCTCGTGCTGTGCGAGGATCTCACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000465431.6 ENST00000465806.6 ENST00000634465.1 |
||
| CDS TCA 90 bp | GGTAAAGATGGGGATAATGATCCTTCCTACCCCATAGAGTTACTGTaGGGATTAAATGAGTTAATAAACGTAAAGTGCTTAGGGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GKDGDNDPSYPIELL*GLNELINVKCLGQF Trigger: GAACTGCCCTAAGCACTTTACGTTTATTAACTCATTTAATCCTCACAGTAACTCTATGGGGTAGGAAGGATCATTATCCCCATCTTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000465431.6 ENST00000465806.6 ENST00000496803.6 ENST00000634711.1 |
||
| CDS CAA 90 bp | AGCTGTCGGTGCCGCCCGCGGCCCGGTTTTCTGACCTCCCGGGCCTaGGAGCCCGGCTCGGGTGTTTACATCAGGCCCTACTTCCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCRCRPRPGFLTSRA*EPGSGVYIRPYFRG Trigger: CCCCCGGAAGTAGGGCCTGATGTAAACACCCGAGCCGGGCTCCAAGGCCCGGGAGGTCAGAAAACCGGGCCGCGGGCGGCACCGACAGCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000376368.7 ENST00000485908.6 ENST00000496803.6 ENST00000634711.1 ENST00000634944.1 |
||
| CDS CAA 72 bp | TGCCGCCCGCGGCCCGGTTTTCTGACCTCCCGGGCCTaGGAGCCCGGCTCGGGTGTTTACATCAGGCCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: CRPRPGFLTSRA*EPGSGVYIRPY Trigger: GTAGGGCCTGATGTAAACACCCGAGCCGGGCTCCAAGGCCCGGGAGGTCAGAAAACCGGGCCGCGGGCGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000376368.7 ENST00000396681.9 ENST00000471338.6 ENST00000485908.6 ENST00000496803.6 ENST00000634390.1 ENST00000634711.1 ENST00000634944.1 ENST00000635344.1 |
||
| CDS GCA 72 bp | AGGGAACCCGGAAGGGTGGGGAGAGAGAGCGTGCCTTaGCCCCAGCAAAGCGAAACCGGCCAAGCCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: REPGRVGRESVP*PQQSETGQALS Trigger: GCTGAGGGCTTGGCCGGTTTCGCTTTGCTGGGGGCAAGGCACGCTCTCTCTCCCCACCCTTCCGGGTTCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000460501.2 ENST00000465382.6 ENST00000634908.1 |
||
| CDS CAA 72 bp | GAGGGAACCCGGAAGGGTGGGGAGAGAGAGCGTGCCTaGCCCCCAGCAAAGCGAAACCGGCCAAGCCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EGTRKGGERERA*PPAKRNRPSPQ Trigger: CTGAGGGCTTGGCCGGTTTCGCTTTGCTGGGGGCAAGGCACGCTCTCTCTCCCCACCCTTCCGGGTTCCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000460501.2 ENST00000465382.6 ENST00000634908.1 |
||
| CDS GCA 72 bp | CCGGGATGCCTCGCCCCTCTCCCAAGACCAGCCGCATaGTCCTTCCAACGCCAGCACCCACTCAAGACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGCLAPLPRPAA*SFQRQHPLKTS Trigger: AGAGGTCTTGAGTGGGTGCTGGCGTTGGAAGGAGCATGCGGCTGGTCTTGGGAGAGGGGCGAGGCATCCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636049.1 |
||
| CDS CCA 72 bp | ACCTGCTCGTGGTCTGGACAGGGACCAGGGTGTCAGTaGAGGTGGGAGCCAACGCCCAGCCCAGCTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TCSWSGQGPGCQ*RWEPTPSPALL Trigger: CAGAAGAGCTGGGCTGGGCGTTGGCTCCCACCTCCACTGACACCCTGGTCCCTGTCCAGACCACGAGCAGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465806.6 ENST00000634711.1 |
||
| CDS CCA 72 bp | TCGTGGTCTGGACAGGGACCAGGGTGTCAGTGGAGGTaGGAGCCAACGCCCAGCCCAGCTCTTCTGCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SWSGQGPGCQWR*EPTPSPALLPI Trigger: AATGGGCAGAAGAGCTGGGCTGGGCGTTGGCTCCCACCTCCACTGACACCCTGGTCCCTGTCCAGACCACGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465806.6 ENST00000634711.1 |
||
| CDS CCA 72 bp | TGGGGTGCCTGTGGGAGGCCAGGAATCCGAGAAATCTaGGCCAAAGGGCAGGATGAGGGCACTTACCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: WGACGRPGIREI*AKGQDEGTYLR Trigger: TCTCAGGTAAGTGCCCTCATCCTGCCCTTTGGCCCAGATTTCTCGGATTCCTGGCCTCCCACAGGCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000376357.1 ENST00000465806.6 ENST00000496803.6 ENST00000634390.1 ENST00000634711.1 |
||
| CDS TCA 72 bp | TCCAGGGTCCTAGTCCATGCACCCTGGAGATTTCCGTaGGGAATCCTAGGGCTCTGTGACTCACCTAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRVLVHAPWRFP*GILGLCDSPRA Trigger: TGCCCTAGGTGAGTCACAGAGCCCTAGGATTCCTCACGGAAATCTCCAGGGTGCATGGACTAGGACCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000465431.6 ENST00000465806.6 ENST00000496803.6 ENST00000634465.1 ENST00000634711.1 |
||
| CDS GCA 72 bp | AGTACTCTGACGTCTTCATCTGCCAGTACCTTGGGGTaGCTGTGGGAGGCCAGGAATCCGAGAAATCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: STLTSSSASTLG*LWEARNPRNLG Trigger: GCCCAGATTTCTCGGATTCCTGGCCTCCCACAGGCACCCCAAGGTACTGGCAGATGAAGACGTCAGAGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376357.1 ENST00000465806.6 ENST00000496803.6 ENST00000634711.1 |
||
| CDS GCA 72 bp | CTCTGTGTGACTCTGAAGTACTCTGACGTCTTCATCTaGCAGTACCTTGGGGTGCCTGTGGGAGGCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LCVTLKYSDVFI*QYLGVPVGGQE Trigger: TTCCTGGCCTCCCACAGGCACCCCAAGGTACTGGCAGATGAAGACGTCAGAGTACTTCAGAGTCACACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376357.1 ENST00000465806.6 ENST00000496803.6 ENST00000634711.1 |
||
| CDS TCA 72 bp | GCCAGGAATCCGAGAAATCTGGGCCAAAGGGCAGGATaGGGGCACTTACCTGAGATCTCTGAGAACTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ARNPRNLGQRAG*GHLPEISENLG Trigger: TCCCAAGTTCTCAGAGATCTCAGGTAAGTGCCCTCATCCTGCCCTTTGGCCCAGATTTCTCGGATTCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000376357.1 ENST00000465806.6 ENST00000496803.6 ENST00000634390.1 ENST00000634711.1 |
||
| CDS GCA 72 bp | CTCGGTAACTATTTCTGCCTCCAGGGTCCTAGTCCATaGACCCTGGAGATTTCCGTGAGGAATCCTAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGNYFCLQGPSP*TLEISVRNPRA Trigger: AGCCCTAGGATTCCTCACGGAAATCTCCAGGGTGCATGGACTAGGACCCTGGAGGCAGAAATAGTTACCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000465431.6 ENST00000465806.6 ENST00000634465.1 ENST00000634711.1 |
||
| CDS TCA 72 bp | TCCTCGCACAGCACGAGCACTTGTGGATATGATCCCTaGGAGGAGTGTTCTAGACTGTTACACTCATCTACA | + |
|
Preference number: 6 (lower is better) Translates to: SSHSTSTCGYDP*EECSRLLHSST Trigger: TGTAGATGAGTGTAACAGTCTAGAACACTCCTCTCAGGGATCATATCCACAAGTGCTCGTGCTGTGCGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000465431.6 ENST00000465806.6 ENST00000634465.1 |
||
| CDS CAA 72 bp | GGATCATCAAGAAAAACCCTTAAAGTAAGATGGCACTaGAGGCTCAAGCCAAGGGGGTATTGGGAAGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSSRKTLKVRWH*RLKPRGYWEDG Trigger: GCCGTCTTCCCAATACCCCCTTGGCTTGAGCCTCAAGTGCCATCTTACTTTAAGGGTTTTTCTTGATGATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000465431.6 ENST00000465806.6 ENST00000496803.6 ENST00000634465.1 ENST00000634711.1 |
||
| CDS CAA 90 bp | TGGGAAGACGGCTCCAAGATTTTAAAACCTATTGCTTGTGTGACCTaGGATGAGTCACTTAACTGCACTGGGCCTCAGTTTCCTCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: WEDGSKILKPIACVT*DESLNCTGPQFPHR Trigger: CCGATGAGGAAACTGAGGCCCAGTGCAGTTAAGTGACTCATCCAAGGTCACACAAGCAATAGGTTTTAAAATCTTGGAGCCGTCTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000465431.6 ENST00000465806.6 ENST00000496803.6 ENST00000634711.1 |
||
| CDS CAA 90 bp | GTCCAGATGGGATCATCAAGAAAAACCCTTAAAGTAAGATGGCACTaGAGGCTCAAGCCAAGGGGGTATTGGGAAGACGGCTCCAAGATT | + |
|
Preference number: 6 (lower is better) Translates to: VQMGSSRKTLKVRWH*RLKPRGYWEDGSKI Trigger: AATCTTGGAGCCGTCTTCCCAATACCCCCTTGGCTTGAGCCTCAAGTGCCATCTTACTTTAAGGGTTTTTCTTGATGATCCCATCTGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000465431.6 ENST00000465806.6 ENST00000496803.6 ENST00000634465.1 ENST00000634711.1 |
||