Pregenerated sensors for WASHC3 (Homo sapiens)
Ensembl gene IDs: ENSG00000120860Ensembl transcript IDs: ENST00000500685.6, ENST00000535501.5, ENST00000536197.5, ENST00000536930.1, ENST00000538761.5, ENST00000539515.5, ENST00000540536.5
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GTGAAAGGTCTGCCAGTTTCTGTAGTTCCAGCTACTTaGGGCGCTGAGGCAGGAGGTCTAGGCTGCAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: VKGLPVSVVPAT*GAEAGGLGCSE Trigger: CTCACTGCAGCCTAGACCTCCTGCCTCAGCGCCCCAAGTAGCTGGAACTACAGAAACTGGCAGACCTTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535501.5 |
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| 3UTR-3UTR CAA 90 bp | GGCACTGGAGCATCTGGCCTCAGCAATACCATCATTTCCAGGCGGGATATTCATAAGGGGAACAGAAATTaGGCTCTGCATATTATGATC | + |
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Preference number: 3 (lower is better) Translates to: GTGASGLSNTIISRRDIHKGNRN*ALHIMI Trigger: GATCATAATATGCAGAGCCAAATTTCTGTTCCCCTT...ATGAATATCCCGCCTGGAAATGATGGTATTGCTGAGGCCAGATGCTCCAGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR CCA 90 bp | TCTGGCCTCAGCAATACCATCATTTCCAGGCGGGATATTCATATTTTCAAGGGGCTCCTCAGCGGGCGGTaGACCCCGAGTTCACCCACA | + |
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Preference number: 4 (lower is better) Translates to: SGLSNTIISRRDIHIFKGLLSGR*TPSSPT Trigger: TGTGGGTGAACTCGGGGTCCACCGCCCGCTGAGGAG...CCCCTTGAAAATATGAATATCCCGCCTGGAAATGATGGTATTGCTGAGGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR CCA 90 bp | CAGGCACTGGAGCATCTGGCCTCAGCAATACCATCATTTCCAGGCGGGATATTCAGGCACTGGAGCATCTaGCCTCAGCAATACCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QALEHLASAIPSFPGGIFRHWSI*PQQYHH Trigger: ATGATGGTATTGCTGAGGCCAGATGCTCCAGTGCCT...GAATATCCCGCCTGGAAATGATGGTATTGCTGAGGCCAGATGCTCCAGTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR GCA 90 bp | AGGCACTGGAGCATCTGGCCTCAGCAATACCATCATTTCCAGGCGGGATATTCACTGTTCTGCTGTGGTTaGTCTGAAGTGGCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RHWSIWPQQYHHFQAGYSLFCCG*SEVASG Trigger: TCCTGAAGCCACTTCAGAGCAACCACAGCAGAACAG...TGAATATCCCGCCTGGAAATGATGGTATTGCTGAGGCCAGATGCTCCAGTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR TCA 90 bp | ACTGGAGCATCTGGCCTCAGCAATACCATCATTTCCAGGCGGGATATTCATATTCTGCTGTGGTTGCTCTaGAGTGGCTTCAGGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGASGLSNTIISRRDIHILLWLL*SGFRMC Trigger: GCACATCCTGAAGCCACTTCAGAGCAACCACAGCAG...AATATGAATATCCCGCCTGGAAATGATGGTATTGCTGAGGCCAGATGCTCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR GCA 90 bp | CAGGCACTGGAGCATCTGGCCTCAGCAATACCATCATTTCCAGGCGGGATATTCTCTTGTGTACTGTTCTaGTGTGGTTGCTCTGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: QALEHLASAIPSFPGGIFSCVLF*CGCSEV Trigger: CACTTCAGAGCAACCACAGCAGAACAGTACACAAGA...GAATATCCCGCCTGGAAATGATGGTATTGCTGAGGCCAGATGCTCCAGTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR TCA 90 bp | CAGGCACTGGAGCATCTGGCCTCAGCAATACCATCATTTCCAGGCGGGATATTCACTGGTACACCCACTTaGACCATTTTGAGATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QALEHLASAIPSFPGGIFTGTPT*TILRYL Trigger: CAGATATCTCAAAATGGTTCAAGTGGGTGTACCAGT...GAATATCCCGCCTGGAAATGATGGTATTGCTGAGGCCAGATGCTCCAGTGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR GCA 90 bp | CACTGGAGCATCTGGCCTCAGCAATACCATCATTTCCAGGCGGGATATTCATATAGGAACTGTACAGTGTaGACCACAAATTGGTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HWSIWPQQYHHFQAGYSYRNCTV*TTNWFR Trigger: TCTAAACCAATTTGTGGTGCACACTGTACAGTTCCT...ATATGAATATCCCGCCTGGAAATGATGGTATTGCTGAGGCCAGATGCTCCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR CCA 90 bp | CTCAGCAATACCATCATTTCCAGGCGGGATATTCATATTTTCAAGGGGAACAGATTTCTGTTGAATAGCTaGCACCTTGGTCAGGTCTAT | + |
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Preference number: 4 (lower is better) Translates to: LSNTIISRRDIHIFKGNRFLLNS*HLGQVY Trigger: ATAGACCTGACCAAGGTGCCAGCTATTCAACAGAAA...TCTGTTCCCCTTGAAAATATGAATATCCCGCCTGGAAATGATGGTATTGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR CCA 90 bp | CTCAGCAATACCATCATTTCCAGGCGGGATATTCATATTTTCAAGGGGAACAGATCTTATTGCCATCACTaGTACACCCACTTGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSNTIISRRDIHIFKGNRSYCHH*YTHLNH Trigger: ATGGTTCAAGTGGGTGTACCAGTGATGGCAATAAGA...TCTGTTCCCCTTGAAAATATGAATATCCCGCCTGGAAATGATGGTATTGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR CAA 90 bp | CACTGGAGCATCTGGCCTCAGCAATACCATCATTTCCAGGCGGGATATTCATATACTGTAGAAAAGCGGTaGAGGAACTGTACAGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HWSIWPQQYHHFQAGYSYTVEKR*RNCTVC Trigger: GCACACTGTACAGTTCCTCAACCGCTTTTCTACAGT...ATATGAATATCCCGCCTGGAAATGATGGTATTGCTGAGGCCAGATGCTCCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR CAA 90 bp | AGGCACTGGAGCATCTGGCCTCAGCAATACCATCATTTCCAGGCGGGATATTCAAAGGGGAACAGAAATTaGGCTCTGCATATTATGATC | + |
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Preference number: 5 (lower is better) Translates to: RHWSIWPQQYHHFQAGYSKGNRN*ALHIMI Trigger: GATCATAATATGCAGAGCCAAATTTCTGTTCCCCTT...TGAATATCCCGCCTGGAAATGATGGTATTGCTGAGGCCAGATGCTCCAGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS-3UTR CAA 90 bp | CACTGGAGCATCTGGCCTCAGCAATACCATCATTTCCAGGCGGGATATTCATATCACTGGTACACCCACTaGAACCATTTTGAGATATCT | + |
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Preference number: 5 (lower is better) Translates to: HWSIWPQQYHHFQAGYSYHWYTH*NHFEIS Trigger: AGATATCTCAAAATGGTTCAAGTGGGTGTACCAGTG...ATATGAATATCCCGCCTGGAAATGATGGTATTGCTGAGGCCAGATGCTCCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540536.5 |
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| CDS GCA 90 bp | TTTATTTTTCAGCTTGATGATAAGGGCTATGGGGATAAGAGTATTTaGTTCTTTCTGCTAGTAATCCTGGGACAGTCCCTTTCCAGATAC | + |
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Preference number: 5 (lower is better) Translates to: FIFQLDDKGYGDKSI*FFLLVILGQSLSRY Trigger: GTATCTGGAAAGGGACTGTCCCAGGATTACTAGCAGAAAGAAGCAAATACTCTTATCCCCATAGCCCTTATCATCAAGCTGAAAAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000536930.1 |
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| CDS GCA 72 bp | CCAGCTACTTGGGGCGCTGAGGCAGGAGGTCTAGGCTaGAGTGAGCTAAGTTCACTCCACTACACTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PATWGAEAGGLG*SELSSLHYTPA Trigger: TGCTGGAGTGTAGTGGAGTGAACTTAGCTCACTGCAGCCTAGACCTCCTGCCTCAGCGCCCCAAGTAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000535501.5 ENST00000539515.5 |
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| CDS CAA 72 bp | CAAGACCCCGTCTCCTCACAAACTGTAGAAAAGCGGTaGAGGAACTGTACAGTGTGCACCACAAATTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: QDPVSSQTVEKR*RNCTVCTTNWF Trigger: AAACCAATTTGTGGTGCACACTGTACAGTTCCTCAACCGCTTTTCTACAGTTTGTGAGGAGACGGGGTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000500685.6 |
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| CDS CAA 72 bp | TCCATCTTGCCCTCCTCACAAACTGTAGAAAAGCGGTaGAGGAACTGTACAGTGTGCACCACAAATTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SILPSSQTVEKR*RNCTVCTTNWF Trigger: AAACCAATTTGTGGTGCACACTGTACAGTTCCTCAACCGCTTTTCTACAGTTTGTGAGGAGGGCAAGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536930.1 |
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| CDS CAA 72 bp | CCCCAACTCTACTCCTCACAAACTGTAGAAAAGCGGTaGAGGAACTGTACAGTGTGCACCACAAATTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: PQLYSSQTVEKR*RNCTVCTTNWF Trigger: AAACCAATTTGTGGTGCACACTGTACAGTTCCTCAACCGCTTTTCTACAGTTTGTGAGGAGTAGAGTTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538761.5 |
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| CDS CCA 72 bp | CAGAGTCTTGTGTACTGTTCTGCTGTAGAGAGTATTTaGTGTAAATCTTTAGACAATTTACAAAAGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: QSLVYCSAVESI*CKSLDNLQKGS Trigger: AGACCCCTTTTGTAAATTGTCTAAAGATTTACACCAAATACTCTCTACAGCAGAACAGTACACAAGACTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536197.5 |
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