RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VWA5B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000158816

Ensembl transcript IDs: ENST00000289815.12, ENST00000289815.13, ENST00000375079.6, ENST00000467486.5, ENST00000473325.5, ENST00000485375.6, ENST00000525343.1, ENST00000530722.5, ENST00000534075.1

Found 884 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGAAGCTCACCTCCCACTGCAGGCGTTGGCTGTCGTGCAGGCCTTTaGCCAGGGCCTTGCCCAGCACCGGGGCCGGGGTGGCGGGCCTGC +
Preference number: 1 (lower is better)
Translates to: RSSPPTAGVGCRAGL*PGPCPAPGPGWRAC
Trigger: GCAGGCCCGCCACCCCGGCCCCGGTGCTGGGCAAGGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCTGCAGTGGGAGGTGAGCTTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 90 bp CGGGGTGGCGGGCCTGCTGGGACTGGCTCGCTCCTGGGACTCGGCTaGGGGGTCCCAGTCCGAGGACGTCTCTGTCTCGAAGGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: RGGGPAGTGSLLGLG*GVPVRGRLCLEGRG
Trigger: CCCTCTGCCTTCGAGACAGAGACGTCCTCGGACTGGGACCCCCCAGCCGAGTCCCAGGAGCGAGCCAGTCCCAGCAGGCCCGCCACCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 90 bp GCCAGCTGCTCGAAGTCGCGGATGATGGCGCGGGCCGCCAGGTGGTaGAAGGTCTCGCTCCATAGGTCGGCATCCTGCGCGCCGCCCCGC +
Preference number: 1 (lower is better)
Translates to: ASCSKSRMMARAARW*KVSLHRSASCAPPR
Trigger: GCGGGGCGGCGCGCAGGATGCCGACCTATGGAGCGAGACCTTCCACCACCTGGCGGCCCGCGCCATCATCCGCGACTTCGAGCAGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 90 bp TCCGCCAGCTGCTCGAAGTCGCGGATGATGGCGCGGGCCGCCAGGTaGTGGAAGGTCTCGCTCCATAGGTCGGCATCCTGCGCGCCGCCC +
Preference number: 1 (lower is better)
Translates to: SASCSKSRMMARAAR*WKVSLHRSASCAPP
Trigger: GGGCGGCGCGCAGGATGCCGACCTATGGAGCGAGACCTTCCACCACCTGGCGGCCCGCGCCATCATCCGCGACTTCGAGCAGCTGGCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR TCA 90 bp GCTCGATCTCGCCCTCGCGCTCCGCCAGCTGCTCGAAGTCGCGGATaGTGGCGCGGGCCGCCAGGTGGTGGAAGGTCTCGCTCCATAGGT +
Preference number: 1 (lower is better)
Translates to: ARSRPRAPPAARSRG*WRGPPGGGRSRSIG
Trigger: ACCTATGGAGCGAGACCTTCCACCACCTGGCGGCCCGCGCCATCATCCGCGACTTCGAGCAGCTGGCGGAGCGCGAGGGCGAGATCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 90 bp GGTCCAGGGGTCCCCAGCTCGAAGCTCACCTCCCACTGCAGGCGTTaGCTGTCGTGCAGGCCTTTGACCAGGGCCTTGCCCAGCACCGGG +
Preference number: 1 (lower is better)
Translates to: GPGVPSSKLTSHCRR*LSCRPLTRALPSTG
Trigger: CCCGGTGCTGGGCAAGGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCTGCAGTGGGAGGTGAGCTTCGAGCTGGGGACCCCTGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 90 bp AAGCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGGTGCACAGCTaGGGACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGAC +
Preference number: 1 (lower is better)
Translates to: KLSQDGCLGGELVHS*GLGVLDSDGRVVRD
Trigger: GTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCCAGCTGTGCACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CCA 90 bp TGCAGGCCTTGCTGGTGTGCAAGGCGCTCACTTGGTAGCGGCGGTTaGACCCCTGCTCGATCTCGCCCTCGCGCTCCGCCAGCTGCTCGA +
Preference number: 1 (lower is better)
Translates to: CRPCWCARRSLGSGG*TPARSRPRAPPAAR
Trigger: TCGAGCAGCTGGCGGAGCGCGAGGGCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAAGTGAGCGCCTTGCACACCAGCAAGGCCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR TCA 90 bp CATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTaGGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCA +
Preference number: 1 (lower is better)
Translates to: HPSAAEAQTAGGQRP*VCPACGPRVLPAAP
Trigger: TGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR GCA 90 bp GCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTaGTGCTCCAGCCATGAGTTGGCCTTGGCAGCCACCAACTCCCAC +
Preference number: 1 (lower is better)
Translates to: AAALSVPCVRPSGTS*CSSHELALAATNSH
Trigger: GTGGGAGTTGGTGGCTGCCAAGGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR GCA 90 bp GCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTaGTCCAGCCATGAGTTGGCCTTGGCAGCCACCAACTCCCACTCA +
Preference number: 1 (lower is better)
Translates to: AALSVPCVRPSGTSC*SSHELALAATNSHS
Trigger: TGAGTGGGAGTTGGTGGCTGCCAAGGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR GCA 90 bp CGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTaGGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTG +
Preference number: 1 (lower is better)
Translates to: RRSTNSWRAAALSVP*VRPSGTSCCSSHEL
Trigger: CAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CCA 90 bp ATCGTCTGCGGCCTTCCAAAGCCAGAAGAGGTGCCCCTCCACTGTTaGGCCAGGGCCCGAGAGCCAAGCATACGCAGGGCAGCTCCAGAG +
Preference number: 1 (lower is better)
Translates to: IVCGLPKPEEVPLHC*ARAREPSIRRAAPE
Trigger: CTCTGGAGCTGCCCTGCGTATGCTTGGCTCTCGGGCCCTGGCCCAACAGTGGAGGGGCACCTCTTCTGGCTTTGGAAGGCCGCAGACGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 90 bp CAAGCATACGCAGGGCAGCTCCAGAGTTGGGGTACTCCACCACGGTaGGCAGGTACCGGCTCTTGCTCACGTCCACAGGCACGAAGGCTG +
Preference number: 1 (lower is better)
Translates to: QAYAGQLQSWGTPPR*AGTGSCSRPQARRL
Trigger: CAGCCTTCGTGCCTGTGGACGTGAGCAAGAGCCGGTACCTGCCCACCGTGGTGGAGTACCCCAACTCTGGAGCTGCCCTGCGTATGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR TCA 90 bp GCTCCAGCCATGAGTTGGCCTTGGCAGCCACCAACTCCCACTCAGTaGAGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCA +
Preference number: 1 (lower is better)
Translates to: APAMSWPWQPPTPTQ*SRRPNCAPAMPAPP
Trigger: TGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACTTCACTGAGTGGGAGTTGGTGGCTGCCAAGGCCAACTCATGGCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR GCA 90 bp TCTGTGATCACGAAGAGGAGCCGCGGGTGGCCTCGGTGCACTGGCTaGCTGATGACCCACTTGAGAGGGGAAAGGATGTTGGTCCCACCC +
Preference number: 1 (lower is better)
Translates to: SVITKRSRGWPRCTG*LMTHLRGERMLVPP
Trigger: GGGTGGGACCAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGTGATCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 90 bp CTTGTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATaGGGCGGCGTCGGCACGAATCTCATGAGTGGGACTCTCCACCCC +
Preference number: 1 (lower is better)
Translates to: LVGQGDDDALGRAGR*GGVGTNLMSGTLHP
Trigger: GGGGTGGAGAGTCCCACTCATGAGATTCGTGCCGACGCCGCCCCATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 90 bp GCCATCTGTGATCACGAAGAGGAGCCGCGGGTGGCCTCGGTGCACTaGCTGCCTGATGACCCACTTGAGAGGGGAAAGGATGTTGGTCCC +
Preference number: 1 (lower is better)
Translates to: AICDHEEEPRVASVH*LPDDPLERGKDVGP
Trigger: GGGACCAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGTGATCACAGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR GCA 90 bp GGCTCGCTGGGGTGGATGAGGATCTCCACAGGCCGGTCAAAGGTGTaGTTGTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCA +
Preference number: 1 (lower is better)
Translates to: GSLGWMRISTGRSKV*LLAKVMMMLLAERA
Trigger: TGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAACAAGCACACCTTTGACCGGCCTGTGGAGATCCTCATCCACCCCAGCGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR GCA 90 bp ACAGCGCCATCTGTGATCACGAAGAGGAGCCGCGGGTGGCCTCGGTaGACTGGCTGCCTGATGACCCACTTGAGAGGGGAAAGGATGTTG +
Preference number: 1 (lower is better)
Translates to: TAPSVITKRSRGWPR*TGCLMTHLRGERML
Trigger: CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGTGATCACAGATGGCGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR GCA 90 bp ATCTGCCACCGCTGGACATCCAGGCTGGTCTGGTTGGTGAGGTCCTaGAGCCTGGCTTTCCGCAGTGGGTATCTCTTGGCAGCTGGCATG +
Preference number: 1 (lower is better)
Translates to: ICHRWTSRLVWLVRS*SLAFRSGYLLAAGM
Trigger: CATGCCAGCTGCCAAGAGATACCCACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCAGACCAGCCTGGATGTCCAGCGGTGGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 90 bp CCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTaGGCCTTTCTCAGGCACGGCTGGACTGACTGGAGGTCGGGACAG +
Preference number: 1 (lower is better)
Translates to: PLMLLLLSMRKMNSP*AFLRHGWTDWRSGQ
Trigger: CTGTCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 90 bp GTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGCCGCGGGTaGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGAGAGGGGAA +
Preference number: 1 (lower is better)
Translates to: VLLTAPSVITKRSRG*PRCTGCLMTHLRGE
Trigger: TTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR TCA 90 bp CTTCAGAAGCACCGTGCTTCTCGCGGCCGGGGGACCTGGCCTCGCTaGAGAGAGCAGTGGGACTTGCCTCCATGTCAGCAATTTCCTGAA +
Preference number: 1 (lower is better)
Translates to: LQKHRASRGRGTWPR*REQWDLPPCQQFPE
Trigger: TTCAGGAAATTGCTGACATGGAGGCAAGTCCCACTGCTCTCTTCAGCGAGGCCAGGTCCCCCGGCCGCGAGAAGCACGGTGCTTCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467486.5
3UTR GCA 90 bp CTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGAGCTaGCAGACTCCTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGT +
Preference number: 1 (lower is better)
Translates to: LPARVRHPESGRRQS*QTPESAACCTGASC
Trigger: ACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGGAGTCTGGCAGCTCTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR GCA 90 bp TGCTTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTaGCCTAGGATGAAGGGTGCCCCCGAGTTCTTGGCACAGTCTCCA +
Preference number: 1 (lower is better)
Translates to: CLVVESPLASRAFLA*PRMKGAPEFLAQSP
Trigger: TGGAGACTGTGCCAAGAACTCGGGGGCACCCTTCATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 90 bp ACTGAGGCCCAGACGGGGGCAGGCACTGGCCTAAAGTTGCATGGCTaGATGGTAGCAAAGTTGGGATTGAACTCAGGCCTCCTGGCTGCC +
Preference number: 1 (lower is better)
Translates to: TEAQTGAGTGLKLHG*MVAKLGLNSGLLAA
Trigger: GGCAGCCAGGAGGCCTGAGTTCAATCCCAACTTTGCTACCATCCAGCCATGCAACTTTAGGCCAGTGCCTGCCCCCGTCTGGGCCTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR TCA 90 bp GCATCTTCCCTCGCCAGCCCCAGCAGCAGTCAGCCCGGGACTGCCTaGATGGGCAGAAAGGAACCACTGAACCATTTGAGATCCACTCCA +
Preference number: 1 (lower is better)
Translates to: ASSLASPSSSQPGTA*MGRKEPLNHLRSTP
Trigger: TGGAGTGGATCTCAAATGGTTCAGTGGTTCCTTTCTGCCCATTCAGGCAGTCCCGGGCTGACTGCTGCTGGGGCTGGCGAGGGAAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR TCA 90 bp GAGGAAGATGAACTCCCCGTGGGCCTTTCTCAGGCACGGCTGGACTaGCTGGAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTGGTG +
Preference number: 1 (lower is better)
Translates to: EEDELPVGLSQARLD*LEVGTEVEHDDGVV
Trigger: CACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR TCA 90 bp GCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCTGGTTGGTaGGGTCCTGCAGCCTGGCTTTCCGCAGTGGGTATCTCTTGGCAG +
Preference number: 1 (lower is better)
Translates to: ANQSATAGHPGWSGW*GPAAWLSAVGISWQ
Trigger: CTGCCAAGAGATACCCACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 90 bp AAGATGAACTCCCCGTGGGCCTTTCTCAGGCACGGCTGGACTGACTaGAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTGGTGGGGA +
Preference number: 1 (lower is better)
Translates to: KMNSPWAFLRHGWTD*RSGQKLSMMTEWWG
Trigger: TCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAAGGCCCACGGGGAGTTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 90 bp AAGGGCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCTaGTTGGTGAGGTCCTGCAGCCTGGCTTTCCGCAGTGGGTATCTC +
Preference number: 1 (lower is better)
Translates to: KGCKSICHRWTSRLV*LVRSCSLAFRSGYL
Trigger: GAGATACCCACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 90 bp AAGGCCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCTaGTTGGTGAGGTCCTGCAGCCTGGCTTTCCGCAGTGGGTATCTC +
Preference number: 1 (lower is better)
Translates to: KACKSICHRWTSRLV*LVRSCSLAFRSGYL
Trigger: GAGATACCCACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR CCA 90 bp GGACTCTCCACCCCTGCGAGCAGACATGGCCCACGGATCTCCAGCTaGAAGTTGAACTCATACTCCATGGGGTTGGACACTTCGGTGTTC +
Preference number: 1 (lower is better)
Translates to: GLSTPASRHGPRISS*KLNSYSMGLDTSVF
Trigger: GAACACCGAAGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGGGTGGAGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR GCA 90 bp GAGGTCACTGGGTTCTCTCATCTGCCCTTTTATTTGAGTGGGCATTaGTGTGTCCACTCCGTGCCCACGTGGTCTACCTCCAGACAGGGC +
Preference number: 1 (lower is better)
Translates to: EVTGFSHLPFYLSGH*CVHSVPTWSTSRQG
Trigger: GCCCTGTCTGGAGGTAGACCACGTGGGCACGGAGTGGACACAGCAATGCCCACTCAAATAAAAGGGCAGATGAGAGAACCCAGTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR CCA 90 bp CCCTTTTATTTGAGTGGGCATTGCTGTGTCCACTCCGTGCCCACGTaGTCTACCTCCAGACAGGGCTCAGGCTTCCACTGCATCTTCCCT +
Preference number: 1 (lower is better)
Translates to: PFYLSGHCCVHSVPT*STSRQGSGFHCIFP
Trigger: AGGGAAGATGCAGTGGAAGCCTGAGCCCTGTCTGGAGGTAGACCACGTGGGCACGGAGTGGACACAGCAATGCCCACTCAAATAAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR CCA 90 bp TCAATGAGGAAGATGAACTCCCCGTGGGCCTTTCTCAGGCACGGCTaGACTGACTGGAGGTCGGGACAGAAGTTGAGCATGATGACGGAG +
Preference number: 1 (lower is better)
Translates to: SMRKMNSPWAFLRHG*TDWRSGQKLSMMTE
Trigger: CTCCGTCATCATGCTCAACTTCTGTCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR GCA 90 bp TGTCAGATCTGGGATTGGAGATGTGCAAAGAAGCATCACATACAATaGCATACCCCACCAGCCGTTCTCCAGGGAAGAGGGAGCTGGCGC +
Preference number: 1 (lower is better)
Translates to: CQIWDWRCAKKHHIQ*HTPPAVLQGRGSWR
Trigger: GCGCCAGCTCCCTCTTCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCAATCCCAGATCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 90 bp CCTCGGACACAGATGCCAGTCCTTTCACCAGTCTGTGGCAGACGTTaGGTCCAATTCCAAAGCTATAGCACCTGGTGGAGAAGGCGTGAT +
Preference number: 1 (lower is better)
Translates to: PRTQMPVLSPVCGRR*VQFQSYSTWWRRRD
Trigger: ATCACGCCTTCTCCACCAGGTGCTATAGCTTTGGAATTGGACCCAACGTCTGCCACAGACTGGTGAAAGGACTGGCATCTGTGTCCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 90 bp AGTGGTCTCAGGGAAGATCCACTCCACAGTCACATCGCTCAGGACTaGGGCCATGGCCTTCTTCAAGGATTTGACCATCTTGGGTTGCAG +
Preference number: 1 (lower is better)
Translates to: SGLREDPLHSHIAQD*GHGLLQGFDHLGLQ
Trigger: CTGCAACCCAAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTGACTGTGGAGTGGATCTTCCCTGAGACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR TCA 90 bp ACATGCAAATGTTCCTTGCCAACTGGGCAGTGTGTGTGCAGGGAATaGGCGAGCTTATTGACCGGTGGGTGTCCTGATTTGGAAGGTGTC +
Preference number: 1 (lower is better)
Translates to: TCKCSLPTGQCVCRE*ASLLTGGCPDLEGV
Trigger: GACACCTTCCAAATCAGGACACCCACCGGTCAATAAGCTCGCTCATTCCCTGCACACACACTGCCCAGTTGGCAAGGAACATTTGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR CCA 90 bp GGACAGAAGTTGAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTaGAGGCGTTTTCGAATGATTTCTGTCTTCCGCTCTGCTCTGCTC +
Preference number: 1 (lower is better)
Translates to: GQKLSMMTEWWGMSL*RRFRMISVFRSALL
Trigger: GAGCAGAGCAGAGCGGAAGACAGAAATCATTCGAAAACGCCTCCACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 90 bp TGGACTGACTGGAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTaGTGGGGAATGTCTTTGTGGAGGCGTTTTCGAATGATTTCTGTC +
Preference number: 1 (lower is better)
Translates to: WTDWRSGQKLSMMTE*WGMSLWRRFRMISV
Trigger: GACAGAAATCATTCGAAAACGCCTCCACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTCCAGTCAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR GCA 90 bp CAGACAGGTTACAATCCTCTGACTGGCTGTGTGACCTTGGATAAGTaGCCTACCTCTCTGGCTCTCAATTTCCACATCTGTACTGAGCCA +
Preference number: 1 (lower is better)
Translates to: QTGYNPLTGCVTLDK*PTSLALNFHICTEP
Trigger: TGGCTCAGTACAGATGTGGAAATTGAGAGCCAGAGAGGTAGGGCACTTATCCAAGGTCACACAGCCAGTCAGAGGATTGTAACCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR GCA 90 bp CCTCTAGCGAGCAGAGGCCAAGGGATGCTGCCGAACATTCTACAGTaGACAGAATTGCCCCCAAATATAAAATTATCGTGTCCATGGTGC +
Preference number: 1 (lower is better)
Translates to: PLASRGQGMLPNILQ*TELPPNIKLSCPWC
Trigger: GCACCATGGACACGATAATTTTATATTTGGGGGCAATTCTGTGCACTGTAGAATGTTCGGCAGCATCCCTTGGCCTCTGCTCGCTAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR CCA 90 bp ACTGACTGGAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTGGTaGGGAATGTCTTTGTGGAGGCGTTTTCGAATGATTTCTGTCTTC +
Preference number: 1 (lower is better)
Translates to: TDWRSGQKLSMMTEW*GMSLWRRFRMISVF
Trigger: GAAGACAGAAATCATTCGAAAACGCCTCCACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTCCAGTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 90 bp GCTCTTAAATGTGGATCCAAACCCAATGATATTGAAGAGGCAGGCTaGCATGAGGCTCTTAAGGGCCACCAACATGGCATCCTTGACTCG +
Preference number: 1 (lower is better)
Translates to: ALKCGSKPNDIEEAG*HEALKGHQHGILDS
Trigger: CGAGTCAAGGATGCCATGTTGGTGGCCCTTAAGAGCCTCATGCCAGCCTGCCTCTTCAATATCATTGGGTTTGGATCCACATTTAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR TCA 90 bp TTGCTAGTCTCTATGTGCCTATGCAAGCCTGTAGGCCTGGTTACTTaGGGTCACTGGGTTCTCTCATCTGCCCTTTTATTTGAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: LLVSMCLCKPVGLVT*GHWVLSSALLFEWA
Trigger: TGCCCACTCAAATAAAAGGGCAGATGAGAGAACCCAGTGACCTCAAGTAACCAGGCCTACAGGCTTGCATAGGCACATAGAGACTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR GCA 90 bp CTCTTCTTCTTCATCCCTTTAATGAAATCTGTTCTTCCCTTCAAGTaGTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGG +
Preference number: 1 (lower is better)
Translates to: LFFFIPLMKSVLPFK*WSNSPRVMSPFSIR
Trigger: CCTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCACTTGAAGGGAAGAACAGATTTCATTAAAGGGATGAAGAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 90 bp TTCTTCTTCATCCCTTTAATGAAATCTGTTCTTCCCTTCAAGTGCTaGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGGACA +
Preference number: 1 (lower is better)
Translates to: FFFIPLMKSVLPFKC*SNSPRVMSPFSIRT
Trigger: TGTCCTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCACTTGAAGGGAAGAACAGATTTCATTAAAGGGATGAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp GCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGGTGCACAGCTGGGGACTCGGCAGACGGGCGGGTGGTaGGGGACACTCGATGGCAGG +
Preference number: 2 (lower is better)
Translates to: AVTGRVPRRGAGAQLGTRQTGGW*GTLDGR
Trigger: CCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTG...CCGAGTCCCCAGCTGTGCACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp CGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCGCTCGCTGGGGTGGATaGGGATCTCCACAGGCCGGT +
Preference number: 2 (lower is better)
Translates to: RAAALSVPCVRPSGTSCCARWGG*GSPQAG
Trigger: ACCGGCCTGTGGAGATCCTCATCCACCCCAGCGAGC...GCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp GCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCTGTCACAGGACGGGTaGCTAGGCGGGGAGCTGGTG +
Preference number: 2 (lower is better)
Translates to: AGSGLECALRAALGYFLLLSQDG*LGGELV
Trigger: CACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAG...CAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp CGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCGCCTTGAGTGTGCCCTaGGTGCGGCCCTCGGGTACT +
Preference number: 2 (lower is better)
Translates to: RAAALSVPCVRPSGTSCCALSVP*VRPSGT
Trigger: AGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGC...GCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CAA 90 bp CGGTCCAGGGGTCCCCAGCTCGAAGCTCACCTCCCACTGCAGGCGTaGGCTGTCGTGCAGGCCTTTGACCAGGGCCTTGCCCAGCACCGG +
Preference number: 2 (lower is better)
Translates to: RSRGPQLEAHLPLQA*AVVQAFDQGLAQHR
Trigger: CCGGTGCTGGGCAAGGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCTGCAGTGGGAGGTGAGCTTCGAGCTGGGGACCCCTGGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp ACGAAGAGGAGCCGCGGGTGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGGGCCGAGCGGGCAGATaGGGCGGCGTCGGCACGAAT +
Preference number: 2 (lower is better)
Translates to: TKRSRGWPRCTGCLMTHLGRAGR*GGVGTN
Trigger: ATTCGTGCCGACGCCGCCCCATCTGCCCGCTCGGCC...CAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CCATCTTGGGTTGCAGCCGCTCCCCCTCCATCAGGAGCTCAGCACTGCCCTCGGGGGGACTCGGGGTCTTaGACTCAGACGGGCGGGTGG +
Preference number: 2 (lower is better)
Translates to: PSWVAAAPPPSGAQHCPRGDSGS*TQTGGW
Trigger: CCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCC...CCGAGGGCAGTGCTGAGCTCCTGATGGAGGGGGAGCGGCTGCAACCCAAGATGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CAA 90 bp TCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTaGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SSQCRRSTNSWRAAA*SVPCVRPSGTSCCS
Trigger: GGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp TCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACGCTGGCGCTGACGGGTaGGACCAGGACCTCAGTGGT +
Preference number: 2 (lower is better)
Translates to: SDGRVVRDTRWQVKGDVHAGADG*DQDLSG
Trigger: ACCACTGAGGTCCTGGTCTCACCCGTCAGCGCCAGC...GTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp GTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGCCTTCAGAAGCACCGTaGTTCTCGCGGCCGGGGGAC +
Preference number: 2 (lower is better)
Translates to: VCPACGPRVLPAAPAMSWPSEAP*FSRPGD
Trigger: GTCCCCCGGCCGCGAGAAGCACGGTGCTTCTGAAGG...CCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp CCATCTTGGGTTGCAGCCGCTCCCCCTCCATCAGGAGCTCAGCACTGCCCTCGGCTGTCACAGGACGGGTaGCTAGGCGGGGAGCTGGTG +
Preference number: 2 (lower is better)
Translates to: PSWVAAAPPPSGAQHCPRLSQDG*LGGELV
Trigger: CACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAG...CCGAGGGCAGTGCTGAGCTCCTGATGGAGGGGGAGCGGCTGCAACCCAAGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp ACGAAGAGGAGCCGCGGGTGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGAGTGTGCTCCACCACTaGCCTCGGCTCCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: TKRSRGWPRCTGCLMTHLSVLHH*PRLQAQ
Trigger: CTGGGCCTGGAGCCGAGGGCAGTGGTGGAGCACACT...CAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp GCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGCCTTGGCAGGCCTTGAGTGTGCCCTaGGTGCGGCCCTCGGGTACT +
Preference number: 2 (lower is better)
Translates to: ACGPRVLPAAPAMSWPWQALSVP*VRPSGT
Trigger: AGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGC...CTGCCAAGGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CACCACCGTGGCCCACAGCTTCCCAGTGTGCTCCACCACTGCCCTCGGCTCCAGGAGCTGGTGCACAGCTaGGGACTCGGGGTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: HHRGPQLPSVLHHCPRLQELVHS*GLGVLD
Trigger: GTCCAAGACCCCGAGTCCCCAGCTGTGCACCAGCTC...CTGGAGCCGAGGGCAGTGGTGGAGCACACTGGGAAGCTGTGGGCCACGGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCGAGCTGGTGCACAGCTaGGGACTCGGGGTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: QKHKQLAGSGLECALRAAELVHS*GLGVLD
Trigger: GTCCAAGACCCCGAGTCCCCAGCTGTGCACCAGCTC...GGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp GCCAGAGGCTCCAGGGAGAAGCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGTGGGGCTCGCTGGGGTaGATGAGGATCTCCACAGGC +
Preference number: 2 (lower is better)
Translates to: ARGSREKLSQDGCLGGELWGSLG*MRISTG
Trigger: GCCTGTGGAGATCCTCATCCACCCCAGCGAGCCCCA...CAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGCTTCTCCCTGGAGCCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp TTGGTAGCGGCGGTTGGACCCCTGCTCGATCTCGCCCTCGCGCTCCGCCAGCTGTGGGGTCACTTGCCATaGTGGCTCTTGGGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: LVAAVGPLLDLALALRQLWGHLP*WLLGGA
Trigger: AGCCCCTCCCAAGAGCCACCATGGCAAGTGACCCCA...CAGCTGGCGGAGCGCGAGGGCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp TGGGCCAGGGCCCGAGAGCCAAGCATACGCAGGGCAGCTCCAGAGTTGGGGTACAGGCGTTGGCTGTCGTaGAGGCCTTTGACCAGGGCC +
Preference number: 2 (lower is better)
Translates to: WARAREPSIRRAAPELGYRRWLS*RPLTRA
Trigger: GGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCT...GTACCCCAACTCTGGAGCTGCCCTGCGTATGCTTGGCTCTCGGGCCCTGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp CCATCTTGGGTTGCAGCCGCTCCCCCTCCATCAGGAGCTCAGCACTGCCCTCGGCCCTGCGAGCAGACATaGCCCACGGATCTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: PSWVAAAPPPSGAQHCPRPCEQT*PTDLQL
Trigger: CAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGG...CCGAGGGCAGTGCTGAGCTCCTGATGGAGGGGGAGCGGCTGCAACCCAAGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp TGCAGGCGTTGGCTGTCGTGCAGGCCTTTGACCAGGGCCTTGCCCAGCACCGGGGTGGCCTCGGTGCACTaGCTGCCTGATGACCCACTT +
Preference number: 2 (lower is better)
Translates to: CRRWLSCRPLTRALPSTGVASVH*LPDDPL
Trigger: AAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCAC...CCCGGTGCTGGGCAAGGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp CGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCCACATCGCTCAGGACTaGGGCCATGGCCTTCTTCAA +
Preference number: 2 (lower is better)
Translates to: RAAALSVPCVRPSGTSCCHIAQD*GHGLLQ
Trigger: TTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG...GCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR TCA 90 bp CTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACACAGAAGGCTTCGTTaGGCAGGAAGGCTCCGGAGG +
Preference number: 2 (lower is better)
Translates to: LRRAGGEGHSMAGEGGRPHRRLR*AGRLRR
Trigger: CCTCCGGAGCCTTCCTGCTCAACGAAGCCTTCTGTG...TGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp TTGGTAGCGGCGGTTGGACCCCTGCTCGATCTCGCCCTCGCGCTCCGCCAGCTGGCCCTCGGACACAGATaGCAGTCCTTTCACCAGTCT +
Preference number: 2 (lower is better)
Translates to: LVAAVGPLLDLALALRQLALGHR*QSFHQS
Trigger: AGACTGGTGAAAGGACTGGCATCTGTGTCCGAGGGC...CAGCTGGCGGAGCGCGAGGGCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp GCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGCCTTGGCAGTCCCACTGCAGGCGTTaGCTGTCGTGCAGGCCTTTG +
Preference number: 2 (lower is better)
Translates to: ACGPRVLPAAPAMSWPWQSHCRR*LSCRPL
Trigger: CAAAGGCCTGCACGACAGCCAACGCCTGCAGTGGGA...CTGCCAAGGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR TCA 90 bp GGACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGTCGGCACGAATCTCATaGGTGGGACTCTCCACCCCT +
Preference number: 2 (lower is better)
Translates to: GLGVLDSDGRVVRDTRWQSARIS*VGLSTP
Trigger: AGGGGTGGAGAGTCCCACTCATGAGATTCGTGCCGA...CTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp ACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGCTCCGGAGGCCAGCTaGAGAGACACCAGAGGTATG +
Preference number: 2 (lower is better)
Translates to: TRGLGLRRAGGEGHSMAGAPEAS*RDTRGM
Trigger: CATACCTCTGGTGTCTCTGCAGCTGGCCTCCGGAGC...ACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp GAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTACTGTGCTCCAGCCATaGCAGCCCCACCACCGTGGC +
Preference number: 2 (lower is better)
Translates to: EILIPVPQKHKQLAGSGLTVLQP*QPHHRG
Trigger: GCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGT...AAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp TGGGCCAGGGCCCGAGAGCCAAGCATACGCAGGGCAGCTCCAGAGTTGGGGTACTGGTTGGTGAGGTCCTaGAGCCTGGCTTTCCGCAGT +
Preference number: 2 (lower is better)
Translates to: WARAREPSIRRAAPELGYWLVRS*SLAFRS
Trigger: ACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCA...GTACCCCAACTCTGGAGCTGCCCTGCGTATGCTTGGCTCTCGGGCCCTGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp CCATCTTGGGTTGCAGCCGCTCCCCCTCCATCAGGAGCTCAGCACTGCCCTCGGGCCATGAGTTGGCCTTaGCAGCCACCAACTCCCACT +
Preference number: 2 (lower is better)
Translates to: PSWVAAAPPPSGAQHCPRAMSWP*QPPTPT
Trigger: AGTGGGAGTTGGTGGCTGCCAAGGCCAACTCATGGC...CCGAGGGCAGTGCTGAGCTCCTGATGGAGGGGGAGCGGCTGCAACCCAAGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp CTGAGCCAAGGTGGGCCCCTAAACTCTCTCCTCCCCCAGGTCTGCTATAAAGTCGGCCGAGCGGGCAGATaGGGCGGCGTCGGCACGAAT +
Preference number: 2 (lower is better)
Translates to: LSQGGPLNSLLPQVCYKVGRAGR*GGVGTN
Trigger: ATTCGTGCCGACGCCGCCCCATCTGCCCGCTCGGCC...GACTTTATAGCAGACCTGGGGGAGGAGAGAGTTTAGGGGCCCACCTTGGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR CCA 90 bp AGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACACACGGCTGGACTGACTaGAGGTCGGGACAGAAGTTG +
Preference number: 2 (lower is better)
Translates to: SRRPNCAPAMPAPPPWPTHGWTD*RSGQKL
Trigger: CAACTTCTGTCCCGACCTCCAGTCAGTCCAGCCGTG...TGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp AGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACATTTCTCAGGCACGGCTaGACTGACTGGAGGTCGGGA +
Preference number: 2 (lower is better)
Translates to: SRRPNCAPAMPAPPPWPTFLRHG*TDWRSG
Trigger: TCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAA...TGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp TGGGCCAGGGCCCGAGAGCCAAGCATACGCAGGGCAGCTCCAGAGTTGGGGTACTCGAAGGCAGAGGGATaGTGGGACGGCTCCAGATCT +
Preference number: 2 (lower is better)
Translates to: WARAREPSIRRAAPELGYSKAEG*WDGSRS
Trigger: AGATCTGGAGCCGTCCCACCATCCCTCTGCCTTCGA...GTACCCCAACTCTGGAGCTGCCCTGCGTATGCTTGGCTCTCGGGCCCTGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CAA 90 bp AGGAGCCGCGGGTGGCCTCGGTGCACTGGCTGCCTGATGACCCACTaGAGAGGGGAAAGGATGTTGGTCCCACCCATGTCGGCCTTCATT +
Preference number: 2 (lower is better)
Translates to: RSRGWPRCTGCLMTH*RGERMLVPPMSAFI
Trigger: AATGAAGGCCGACATGGGTGGGACCAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGAGCTGCCAGACTGGCCCAGCTTGCCCTTaGCCAGAGGCTCCAGGGAGA +
Preference number: 2 (lower is better)
Translates to: LPARVRHPESGRRQSCQTGPACP*PEAPGR
Trigger: TCTCCCTGGAGCCTCTGGCCAAGGGCAAGCTGGGCC...AGTCTGGCAGCTCTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp TCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACCACGAATCTCATGAGTaGGACTCTCCACCCCTGCGA +
Preference number: 2 (lower is better)
Translates to: SDGRVVRDTRWQVKGDVHHESHE*DSPPLR
Trigger: TCGCAGGGGTGGAGAGTCCCACTCATGAGATTCGTG...GTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp TGCAGGCGTTGGCTGTCGTGCAGGCCTTTGACCAGGGCCTTGCCCAGCACCGGGGTATCTCTTGGCAGCTaGCATGGGGTCACTTGCCAT +
Preference number: 2 (lower is better)
Translates to: CRRWLSCRPLTRALPSTGVSLGS*HGVTCH
Trigger: ATGGCAAGTGACCCCATGCCAGCTGCCAAGAGATAC...CCCGGTGCTGGGCAAGGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp CCGTGCCCACGTGGTCTACCTCCAGACAGGGCTCAGGCTTCCACTGCATCTTCCCAGTCAGCCCGGGACTaGCTGAATGGGCAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: PCPRGLPPDRAQASTASSQSARD*LNGQKG
Trigger: TCCTTTCTGCCCATTCAGGCAGTCCCGGGCTGACTG...GGAAGATGCAGTGGAAGCCTGAGCCCTGTCTGGAGGTAGACCACGTGGGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR-3UTR CCA 90 bp CACCACCGTGGCCCACAGCTTCCCAGTGTGCTCCACCACTGCCCTCGGCTCCAGCACAGCTTTGATCAGTaGCTTGCTCAGGAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: HHRGPQLPSVLHHCPRLQHSFDQ*LAQEAL
Trigger: AAGGGCTTCCTGAGCAAGCCACTGATCAAAGCTGTG...CTGGAGCCGAGGGCAGTGGTGGAGCACACTGGGAAGCTGTGGGCCACGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CGAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTGCTCCAGCCATGAGTTaGCCTTGGCAGCCACCAACT +
Preference number: 2 (lower is better)
Translates to: RDSHPSAAEAQTAGGQRPAPAMS*PWQPPT
Trigger: AGTTGGTGGCTGCCAAGGCCAACTCATGGCTGGAGC...AGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp GGTGCCCCCGAGTTCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCCTTCCCTTCAAGTGCTaGTCAAACTCTCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: GAPEFLAQSPPSSPGPSSLPFKC*SNSPRV
Trigger: GACCCTGGGAGAGTTTGACCAGCACTTGAAGGGAAG...GGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGAACTCGGGGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp GTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGAGCATGATGACGGAGTaGTGGGGAATGTCTTTGTGG +
Preference number: 2 (lower is better)
Translates to: VGGRTVLQPCQPHHRGPQSMMTE*WGMSLW
Trigger: CCACAAAGACATTCCCCACCACTCCGTCATCATGCT...CTGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp CTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGATAAGAGGAGCCGCGGGTaGCCTCGGTGCACTGGCTGC +
Preference number: 2 (lower is better)
Translates to: LRVQHAVPAPLVRSGIGDKRSRG*PRCTGC
Trigger: GCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTT...ATCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CTGGCCTCGCTGAAGAGAGCAGTGGGACTTGCCTCCATGTCATTTCCTGGTGCCGGGCAGCTCCAGAGTTaGGGTACTCCACCACGGTGG +
Preference number: 2 (lower is better)
Translates to: LASLKRAVGLASMSFPGAGQLQS*GTPPRW
Trigger: CCACCGTGGTGGAGTACCCCAACTCTGGAGCTGCCC...GGCACCAGGAAATGACATGGAGGCAAGTCCCACTGCTCTCTTCAGCGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CAA 90 bp AGATCGTGCTTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTaGGCCTGCCCTAGGATGAAGGGTGCCCCCGAGTTCTTGGCACAG +
Preference number: 2 (lower is better)
Translates to: RSCLVVESPLASRAF*ACPRMKGAPEFLAQ
Trigger: CTGTGCCAAGAACTCGGGGGCACCCTTCATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAAGCACGATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp CGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCTATAGCAGAGCATATTaGACTCGAGATTCTCATCCC +
Preference number: 2 (lower is better)
Translates to: RAAALSVPCVRPSGTSCCYSRAY*TRDSHP
Trigger: GGGATGAGAATCTCGAGTTCAATATGCTCTGCTATA...GCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp TTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGATGCTGGTGGAGAAGGCGTaGTTTCGCACCAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: LVVESPLASRAFLACPRMLVEKA*FRTSSS
Trigger: GCTGGAGCTGGTGCGAAATCACGCCTTCTCCACCAG...CATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp TGCTTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGGAGCTGCCAGACTCCTaGGAGTGCAGCATGCTGTAC +
Preference number: 2 (lower is better)
Translates to: CLVVESPLASRAFLACPRELPDS*ECSMLY
Trigger: GTACAGCATGCTGCACTCTCAGGAGTCTGGCAGCTC...CCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp GTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGGACATGGGGGGGACTCTCCACCCCTaGGAGCAGACATGGCCCACG +
Preference number: 2 (lower is better)
Translates to: VLVKLSQGHVPFLYQDMGGTLHP*EQTWPT
Trigger: CGTGGGCCATGTCTGCTCGCAGGGGTGGAGAGTCCC...CCCCATGTCCTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp TTGGTAGCGGCGGTTGGACCCCTGCTCGATCTCGCCCTCGCGCTCCGCCAGCTGTTCTGTCTTCCGCTCTaGTCTGCTCTTCTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: LVAAVGPLLDLALALRQLFCLPL*SALLLH
Trigger: ATGAAGAAGAAGAGCAGAGCAGAGCGGAAGACAGAA...CAGCTGGCGGAGCGCGAGGGCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp GAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTCGACTCCACAGGTAGCCAGGCTGCGCTaGGGACCTTCAGAAGCACCG +
Preference number: 2 (lower is better)
Translates to: ETPEVCSRSSGSRRSTPQVARLR*GPSEAP
Trigger: CGGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTAC...CTGTGGAGTCGACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CCTGATGACCCACTTGAGAGGGGAAAGGATGTTGGTCCCACCCATGTCGGCCTTGTAGCCAGGCTGCGCTaGGGACCTTCAGAAGCACCG +
Preference number: 2 (lower is better)
Translates to: PDDPLERGKDVGPTHVGLVARLR*GPSEAP
Trigger: CGGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTAC...AAGGCCGACATGGGTGGGACCAACATCCTTTCCCCTCTCAAGTGGGTCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp TTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGATGAGGACATGGGGCATATaGGGCTCGCTGGGGTGGATG +
Preference number: 2 (lower is better)
Translates to: LVVESPLASRAFLACPRMRTWGI*GSLGWM
Trigger: CATCCACCCCAGCGAGCCCCATATGCCCCATGTCCT...CATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CAA 90 bp AAGCTCTGGTTCCCGGAGGTCGACTCCACAGCTTTGATCAGTGGCTaGCTCAGGAAGCCCTTGGCTGCTCGCGTCAGTAGCCTGGACTTG +
Preference number: 2 (lower is better)
Translates to: KLWFPEVDSTALISG*LRKPLAARVSSLDL
Trigger: CAAGTCCAGGCTACTGACGCGAGCAGCCAAGGGCTTCCTGAGCAAGCCACTGATCAAAGCTGTGGAGTCGACCTCCGGGAACCAGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CAA 90 bp TCGCTGGGGTGGATGAGGATCTCCACAGGCCGGTCAAAGGTGTGCTaGTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGAT +
Preference number: 2 (lower is better)
Translates to: SLGWMRISTGRSKVC*LAKVMMMLLAERAD
Trigger: ATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAACAAGCACACCTTTGACCGGCCTGTGGAGATCCTCATCCACCCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CAA 90 bp GGCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCTGGTaGGTGAGGTCCTGCAGCCTGGCTTTCCGCAGTGGGTATCTCTTG +
Preference number: 2 (lower is better)
Translates to: GCKSICHRWTSRLVW*VRSCSLAFRSGYLL
Trigger: CAAGAGATACCCACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CAA 90 bp GCCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCTGGTaGGTGAGGTCCTGCAGCCTGGCTTTCCGCAGTGGGTATCTCTTG +
Preference number: 2 (lower is better)
Translates to: ACKSICHRWTSRLVW*VRSCSLAFRSGYLL
Trigger: CAAGAGATACCCACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR TCA 90 bp GTGCACAGCTGGGGACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACTCCAAAGAGATTCTCTaGGGCCTTCATGGAAGAAAG +
Preference number: 2 (lower is better)
Translates to: VHSWGLGVLDSDGRVVRDSKEIL*GLHGRK
Trigger: CTTTCTTCCATGAAGGCCTCAGAGAATCTCTTTGGA...GTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCCAGCTGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp GTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGGTAGCCTGGACTTGTTaGGATTTAGCCAGGATCCAA +
Preference number: 2 (lower is better)
Translates to: VCPACGPRVLPAAPAMSWVAWTC*DLARIQ
Trigger: TTGGATCCTGGCTAAATCTCAACAAGTCCAGGCTAC...CCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp CTGGCCTCGCTGAAGAGAGCAGTGGGACTTGCCTCCATGTCATTTCCTGGTGCCGAGCTGCCAGACTCCTaGGAGTGCAGCATGCTGTAC +
Preference number: 2 (lower is better)
Translates to: LASLKRAVGLASMSFPGAELPDS*ECSMLY
Trigger: GTACAGCATGCTGCACTCTCAGGAGTCTGGCAGCTC...GGCACCAGGAAATGACATGGAGGCAAGTCCCACTGCTCTCTTCAGCGAGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp CATCTGCCCTTTTATTTGAGTGGGCATTGCTGTGTCCACTCCGTGCCCACGTGGGGCTCAGGCTTCCACTaGATCTTCCCTCGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: HLPFYLSGHCCVHSVPTWGSGFH*IFPRQP
Trigger: GGGCTGGCGAGGGAAGATGCAGTGGAAGCCTGAGCC...CCACGTGGGCACGGAGTGGACACAGCAATGCCCACTCAAATAAAAGGGCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR-3UTR GCA 90 bp CTGTTCAGCAAGGGCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCGCTCCGGAGGCCAGCTaGAGAGACACCAGAGGTATG +
Preference number: 2 (lower is better)
Translates to: LFSKGCKSICHRWTSRLVAPEAS*RDTRGM
Trigger: CATACCTCTGGTGTCTCTGCAGCTGGCCTCCGGAGC...GACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCCCTTGCTGAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp AGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGGGCCGGTCAAAGGTGTaGTTGTTGGCCAAGGTGATG +
Preference number: 2 (lower is better)
Translates to: RFSSQCRRSTNSWRAAALGRSKV*LLAKVM
Trigger: CATCACCTTGGCCAACAAGCACACCTTTGACCGGCC...CAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp CTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCATCTTCCGCTCTGCTCTaGTCTTCTTCTTCATCCCTT +
Preference number: 2 (lower is better)
Translates to: LRRAGGEGHSMAGEGGRPSSALL*SSSSSL
Trigger: AAGGGATGAAGAAGAAGAGCAGAGCAGAGCGGAAGA...TGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR GCA 90 bp TCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGATTGACCATCTTGGGTTaGAGCCGCTCCCCCTCCATC +
Preference number: 2 (lower is better)
Translates to: SWHSLHLPARVRHPESGRLTILG*SRSPSI
Trigger: GATGGAGGGGGAGCGGCTGCAACCCAAGATGGTCAA...TCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CTGCCCTCGGACACAGATGCCAGTCCTTTCACCAGTCTGTGGCAGACGTTGGGTAGAAGCACAAACAGCTaGCGGGCAGCGGCCTTGAGT +
Preference number: 2 (lower is better)
Translates to: LPSDTDASPFTSLWQTLGRSTNS*RAAALS
Trigger: ACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCT...ACCCAACGTCTGCCACAGACTGGTGAAAGGACTGGCATCTGTGTCCGAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp AAGGCAGATGAAGGCCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTTGGGGCTCGCTGGGGTaGATGAGGATCTCCACAGGC +
Preference number: 2 (lower is better)
Translates to: KADEGLQINLPPLDIQAGWGSLG*MRISTG
Trigger: GCCTGTGGAGATCCTCATCCACCCCAGCGAGCCCCA...ACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGGCCTTCATCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR CCA 90 bp ATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCCACGGCTGGACTGACTaGAGGTCGGGACAGAAGTTG +
Preference number: 2 (lower is better)
Translates to: IPLMLLLLSMRKMNSPWAHGWTD*RSGQKL
Trigger: CAACTTCTGTCCCGACCTCCAGTCAGTCCAGCCGTG...GGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CAA 90 bp GCCTTTCTCAGGCACGGCTGGACTGACTGGAGGTCGGGACAGAAGTaGAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTGGAGGCGT +
Preference number: 2 (lower is better)
Translates to: AFLRHGWTDWRSGQK*SMMTEWWGMSLWRR
Trigger: ACGCCTCCACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CAA 90 bp GCTCCAGAGTTGGGGTACTCCACCACGGTGGGCAGGTACCGGCTCTaGCTCACGTCCACAGGCACGAAGGCTGTGTATTTGCTAATGATG +
Preference number: 2 (lower is better)
Translates to: APELGYSTTVGRYRL*LTSTGTKAVYLLMM
Trigger: CATCATTAGCAAATACACAGCCTTCGTGCCTGTGGACGTGAGCAAGAGCCGGTACCTGCCCACCGTGGTGGAGTACCCCAACTCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR TCA 90 bp TCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACTCCAAAGAGATTCTCTaGGGCCTTCATGGAAGAAAG +
Preference number: 2 (lower is better)
Translates to: SDGRVVRDTRWQVKGDVHSKEIL*GLHGRK
Trigger: CTTTCTTCCATGAAGGCCTCAGAGAATCTCTTTGGA...GTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp CACCACCGTGGCCCACAGCTTCCCAGTGTGCTCCACCACTGCCCTCGGCTCCAGTATAGCAGAGCATATTaGACTCGAGATTCTCATCCC +
Preference number: 2 (lower is better)
Translates to: HHRGPQLPSVLHHCPRLQYSRAY*TRDSHP
Trigger: GGGATGAGAATCTCGAGTTCAATATGCTCTGCTATA...CTGGAGCCGAGGGCAGTGGTGGAGCACACTGGGAAGCTGTGGGCCACGGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp CACATCGCTCAGGACTGGGGCCATGGCCTTCTTCAAGGATTTGACCATCTTGGGCTGGTGGAGAAGGCGTaGTTTCGCACCAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: HIAQDWGHGLLQGFDHLGLVEKA*FRTSSS
Trigger: GCTGGAGCTGGTGCGAAATCACGCCTTCTCCACCAG...CCCAAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp TCAGCAAGGGCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCTGGTCTGGTTGGTGCTGTATaGCCTCCGTCGCTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: SARAANQSATAGHPGWSGLVGAV*PPSLRE
Trigger: CTCTCTCAGCGACGGAGGGCATACAGCACCAACCAG...ACCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCCCTTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp CAGGCACCAGACTTGCTAGTCTCTATGTGCCTATGCAAGCCTGTAGGCCTGGTTCACTCCGTGCCCACGTaGTCTACCTCCAGACAGGGC +
Preference number: 2 (lower is better)
Translates to: QAPDLLVSMCLCKPVGLVHSVPT*STSRQG
Trigger: GCCCTGTCTGGAGGTAGACCACGTGGGCACGGAGTG...AACCAGGCCTACAGGCTTGCATAGGCACATAGAGACTAGCAAGTCTGGTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR-3UTR TCA 90 bp TGCTTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGGGAGGCGTTTTCGAATaGTTTCTGTCTTCCGCTCTG +
Preference number: 2 (lower is better)
Translates to: CLVVESPLASRAFLACPRGGVFE*FLSSAL
Trigger: CAGAGCGGAAGACAGAAATCATTCGAAAACGCCTCC...CCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCGCTGGCGCTGACGGGTaGGACCAGGACCTCAGTGGT +
Preference number: 2 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLAGADG*DQDLSG
Trigger: ACCACTGAGGTCCTGGTCTCACCCGTCAGCGCCAGC...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp CTACAGGCACCAGACTTGCTAGTCTCTATGTGCCTATGCAAGCCTGTAGGCCTGGCTGTGTCCACTCCGTaGCCACGTGGTCTACCTCCA +
Preference number: 2 (lower is better)
Translates to: LQAPDLLVSMCLCKPVGLAVSTP*PRGLPP
Trigger: TGGAGGTAGACCACGTGGGCACGGAGTGGACACAGC...CAGGCCTACAGGCTTGCATAGGCACATAGAGACTAGCAAGTCTGGTGCCTGTAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR-3UTR GCA 90 bp CACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAACCTCGGTGCACTGGCTaGCTGATGACCCACTTGAGA +
Preference number: 2 (lower is better)
Translates to: HQLQHLPCVVDSAICDHEPRCTG*LMTHLR
Trigger: TCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGG...TTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp TCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACCTGGGATTGGAGATGTaGAAAGAAGCATCACATACA +
Preference number: 2 (lower is better)
Translates to: SDGRVVRDTRWQVKGDVHLGLEM*KEASHT
Trigger: TGTATGTGATGCTTCTTTGCACATCTCCAATCCCAG...GTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGTTCTCTATCAGGACATaGGGCATATGGGGCTCGCTG +
Preference number: 2 (lower is better)
Translates to: HSLHLPARVRHPESGRRQFSIRT*GIWGSL
Trigger: CAGCGAGCCCCATATGCCCCATGTCCTGATAGAGAA...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CACATCGCTCAGGACTGGGGCCATGGCCTTCTTCAAGGATTTGACCATCTTGGGTTTCTCAGGCACGGCTaGACTGACTGGAGGTCGGGA +
Preference number: 2 (lower is better)
Translates to: HIAQDWGHGLLQGFDHLGFLRHG*TDWRSG
Trigger: TCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAA...CCCAAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CAA 90 bp CGGTGCACTGGCTGCCTGATGACCCACTTGAGAGGGGAAAGGATGTaGGTCCCACCCATGTCGGCCTTCATTCTCTGGATGTCATCACAA +
Preference number: 2 (lower is better)
Translates to: RCTGCLMTHLRGERM*VPPMSAFILWMSSQ
Trigger: TTGTGATGACATCCAGAGAATGAAGGCCGACATGGGTGGGACCAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CAA 90 bp AGGTACCGGCTCTTGCTCACGTCCACAGGCACGAAGGCTGTGTATTaGCTAATGATGTTGCAGGCCTTGCTGGTGTGCAAGGCGCTCACT +
Preference number: 2 (lower is better)
Translates to: RYRLLLTSTGTKAVY*LMMLQALLVCKALT
Trigger: AGTGAGCGCCTTGCACACCAGCAAGGCCTGCAACATCATTAGCAAATACACAGCCTTCGTGCCTGTGGACGTGAGCAAGAGCCGGTACCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR TCA 90 bp GAGACAAGAGCCTGTCCTACAGGCACCAGACTTGCTAGTCTCTATGTGCCTATGCAGCCCGGGACTGCCTaGATGGGCAGAAAGGAACCA +
Preference number: 2 (lower is better)
Translates to: ETRACPTGTRLASLYVPMQPGTA*MGRKEP
Trigger: TGGTTCCTTTCTGCCCATTCAGGCAGTCCCGGGCTG...CATAGGCACATAGAGACTAGCAAGTCTGGTGCCTGTAGGACAGGCTCTTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR-3UTR TCA 90 bp CTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGAGCTGCCAGACTGGAGGCGTTTTCGAATaGTTTCTGTCTTCCGCTCTG +
Preference number: 2 (lower is better)
Translates to: LPARVRHPESGRRQSCQTGGVFE*FLSSAL
Trigger: CAGAGCGGAAGACAGAAATCATTCGAAAACGCCTCC...AGTCTGGCAGCTCTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGCCTTCTTCAAGGATTTaGCCATCTTGGGTTGCAGCC +
Preference number: 2 (lower is better)
Translates to: HSLHLPARVRHPESGRRQPSSRI*PSWVAA
Trigger: GGCTGCAACCCAAGATGGTCAAATCCTTGAAGAAGG...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp AAGGCAGATGAAGGCCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTGCATCCTTGACTCGGTaGATGCTGATCCCGCTCATG +
Preference number: 2 (lower is better)
Translates to: KADEGLQINLPPLDIQAGASLTR*MLIPLM
Trigger: CATGAGCGGGATCAGCATGCACCGAGTCAAGGATGC...ACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGGCCTTCATCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR GCA 90 bp AGTCAAATGAAAGAGCACATGCAAATGTTCCTTGCCAACTGGGCAGTGTGTGTGCGCGGGTGGCCTCGGTaGACTGGCTGCCTGATGACC +
Preference number: 2 (lower is better)
Translates to: SQMKEHMQMFLANWAVCVRGWPR*TGCLMT
Trigger: GGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCG...CACACACACTGCCCAGTTGGCAAGGAACATTTGCATGTGCTCTTTCATTTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR CCA 90 bp CTGAGCCAAGGTGGGCCCCTAAACTCTCTCCTCCCCCAGGTCTGCTATAAAGTCATTGAAGAGGCAGGCTaGCATGAGGCTCTTAAGGGC +
Preference number: 2 (lower is better)
Translates to: LSQGGPLNSLLPQVCYKVIEEAG*HEALKG
Trigger: GCCCTTAAGAGCCTCATGCCAGCCTGCCTCTTCAAT...GACTTTATAGCAGACCTGGGGGAGGAGAGAGTTTAGGGGCCCACCTTGGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR TCA 90 bp AATGTCTTTGTGGAGGCGTTTTCGAATGATTTCTGTCTTCCGCTCTGCTCTGCTGCTCGCTGGGGTGGATaGGGATCTCCACAGGCCGGT +
Preference number: 2 (lower is better)
Translates to: NVFVEAFSNDFCLPLCSAARWGG*GSPQAG
Trigger: ACCGGCCTGTGGAGATCCTCATCCACCCCAGCGAGC...AGCAGAGCAGAGCGGAAGACAGAAATCATTCGAAAACGCCTCCACAAAGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp CAGAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTCGACTCCACGAGAGCAGTGGGACTTaGCTCCATGTCAGCAATTTC +
Preference number: 2 (lower is better)
Translates to: QRHQRYVVEALVPGGRLHESSGT*LHVSNF
Trigger: GAAATTGCTGACATGGAGGCAAGTCCCACTGCTCTC...GTGGAGTCGACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467486.5
3UTR-3UTR GCA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGTCTTCCGCTCTGCTCTaGTCTTCTTCTTCATCCCTT +
Preference number: 2 (lower is better)
Translates to: HSLHLPARVRHPESGRRQSSALL*SSSSSL
Trigger: AAGGGATGAAGAAGAAGAGCAGAGCAGAGCGGAAGA...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp TGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCAGGGACCTCGGTGCACTGGCTaGCTGATGACCCACTTGAGA +
Preference number: 2 (lower is better)
Translates to: CAKKHHIQCHTPPAVLQGPRCTG*LMTHLR
Trigger: TCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGG...TCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGTTCTCTATCAGGACATaGGGCATATGGGGCTCGCTG +
Preference number: 2 (lower is better)
Translates to: LQHLPCVVDSAICDHEEEFSIRT*GIWGSL
Trigger: CAGCGAGCCCCATATGCCCCATGTCCTGATAGAGAA...CTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGCTTCCCTTCAAGTGCTaGTCAAACTCTCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: QLQHLPCVVDSAICDHEELPFKC*SNSPRV
Trigger: GACCCTGGGAGAGTTTGACCAGCACTTGAAGGGAAG...CTCTTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp ACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCATGATGACGGAGTGGTaGGGAATGTCTTTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: TNMASLTRCMLIPLMLLLMMTEW*GMSLWR
Trigger: CCTCCACAAAGACATTCCCCACCACTCCGTCATCAT...GAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CTGAGCCAAGGTGGGCCCCTAAACTCTCTCCTCCCCCAGGTCTGCTATAAAGTCCCTTTCACCAGTCTGTaGCAGACGTTGGGTCCAATT +
Preference number: 2 (lower is better)
Translates to: LSQGGPLNSLLPQVCYKVPFTSL*QTLGPI
Trigger: AATTGGACCCAACGTCTGCCACAGACTGGTGAAAGG...GACTTTATAGCAGACCTGGGGGAGGAGAGAGTTTAGGGGCCCACCTTGGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR GCA 90 bp ACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGGTTCTTCCCTTCAAGTaGTGGTCAAACTCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: TRCMLIPLMLLLLSMRKMVLPFK*WSNSPR
Trigger: CCTGGGAGAGTTTGACCAGCACTTGAAGGGAAGAAC...CATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR GCA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGTTCTGTCTTCCGCTCTaGTCTGCTCTTCTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: HSLHLPARVRHPESGRRQFCLPL*SALLLH
Trigger: ATGAAGAAGAAGAGCAGAGCAGAGCGGAAGACAGAA...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCATGATGACGGAGTGGTaGGGAATGTCTTTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: HADPAHAAAPVNEEDELPMMTEW*GMSLWR
Trigger: CCTCCACAAAGACATTCCCCACCACTCCGTCATCAT...GGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp TCATTTCCTGGTGCCGAATCTTCTCCAAGCATCGTCTGCGGCCTTCCAAAGCCAATTGAAGAGGCAGGCTaGCATGAGGCTCTTAAGGGC +
Preference number: 2 (lower is better)
Translates to: SFPGAESSPSIVCGLPKPIEEAG*HEALKG
Trigger: GCCCTTAAGAGCCTCATGCCAGCCTGCCTCTTCAAT...TGGCTTTGGAAGGCCGCAGACGATGCTTGGAGAAGATTCGGCACCAGGAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp CTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGTGTCATCACAAGCCATaGCCAAGCTGTCCTCACTGT +
Preference number: 2 (lower is better)
Translates to: LQHLPCVVDSAICDHEEECHHKP*PSCPHC
Trigger: ACAGTGAGGACAGCTTGGCCATGGCTTGTGATGACA...CTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CAA 90 bp TGGCTGTTACCATGGAGACAAGAGCCTGTCCTACAGGCACCAGACTaGCTAGTCTCTATGTGCCTATGCAAGCCTGTAGGCCTGGTTACT +
Preference number: 2 (lower is better)
Translates to: WLLPWRQEPVLQAPD*LVSMCLCKPVGLVT
Trigger: AGTAACCAGGCCTACAGGCTTGCATAGGCACATAGAGACTAGCAAGTCTGGTGCCTGTAGGACAGGCTCTTGTCTCCATGGTAACAGCCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR-3UTR TCA 90 bp CAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCCCAACTCCCACTCAGTaGAGTAGGAGGCCGAACTGT +
Preference number: 2 (lower is better)
Translates to: QSILNSRFSSQCRRSTNSPTPTQ*SRRPNC
Trigger: ACAGTTCGGCCTCCTACTTCACTGAGTGGGAGTTGG...GCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGATTCGGCCTTCATTCTCTaGATGTCATCACAAGCCATG +
Preference number: 2 (lower is better)
Translates to: LRVQHAVPAPLVRSGIGDSAFIL*MSSQAM
Trigger: CATGGCTTGTGATGACATCCAGAGAATGAAGGCCGA...ATCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CAA 90 bp TCGGGACAGAAGTTGAGCATGATGACGGAGTGGTGGGGAATGTCTTaGTGGAGGCGTTTTCGAATGATTTCTGTCTTCCGCTCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: SGQKLSMMTEWWGMS*WRRFRMISVFRSAL
Trigger: CAGAGCAGAGCGGAAGACAGAAATCATTCGAAAACGCCTCCACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR TCA 90 bp CTACAGGCACCAGACTTGCTAGTCTCTATGTGCCTATGCAAGCCTGTAGGCCTGATCTGCCCTTTTATTTaGGTGGGCATTGCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: LQAPDLLVSMCLCKPVGLICPFI*VGIAVS
Trigger: GGACACAGCAATGCCCACTCAAATAAAAGGGCAGAT...CAGGCCTACAGGCTTGCATAGGCACATAGAGACTAGCAAGTCTGGTGCCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR-3UTR TCA 90 bp GTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACTCGACTCCACAGCTTTaGTCAGTGGCTTGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: VIAEHIELEILIPVPQKHSTPQL*SVACSG
Trigger: TCCTGAGCAAGCCACTGATCAAAGCTGTGGAGTCGA...GTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp GAGACAAGAGCCTGTCCTACAGGCACCAGACTTGCTAGTCTCTATGTGCCTATGGCCCTTTTATTTGAGTaGGCATTGCTGTGTCCACTC +
Preference number: 2 (lower is better)
Translates to: ETRACPTGTRLASLYVPMALLFE*ALLCPL
Trigger: GAGTGGACACAGCAATGCCCACTCAAATAAAAGGGC...CATAGGCACATAGAGACTAGCAAGTCTGGTGCCTGTAGGACAGGCTCTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR-3UTR CCA 90 bp CGGGTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCCACGGATCTCCAGCTaGAAGTTGAACTCATACTCC +
Preference number: 2 (lower is better)
Translates to: RVIAEHIELEILIPVPQKPRISS*KLNSYS
Trigger: GGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGG...CTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAACCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp TGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCAGGGACAAAGCTATAGCACCTaGTGGAGAAGGCGTGATTTC +
Preference number: 2 (lower is better)
Translates to: CAKKHHIQCHTPPAVLQGQSYST*WRRRDF
Trigger: GAAATCACGCCTTCTCCACCAGGTGCTATAGCTTTG...TCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CCA 90 bp CCTGATTTGGAAGGTGTCCTCGGAGGTAAGGCAGATGAAGGCCTGCAAATCAATGTCTGTGGCAGACGTTaGGTCCAATTCCAAAGCTAT +
Preference number: 2 (lower is better)
Translates to: PDLEGVLGGKADEGLQINVCGRR*VQFQSY
Trigger: ATAGCTTTGGAATTGGACCCAACGTCTGCCACAGAC...ATTGATTTGCAGGCCTTCATCTGCCTTACCTCCGAGGACACCTTCCAAATCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR CAA 90 bp TTCAAAGGTCAGACAGGTTACAATCCTCTGACTGGCTGTGTGACCTaGGATAAGTGCCCTACCTCTCTGGCTCTCAATTTCCACATCTGT +
Preference number: 2 (lower is better)
Translates to: FKGQTGYNPLTGCVT*DKCPTSLALNFHIC
Trigger: ACAGATGTGGAAATTGAGAGCCAGAGAGGTAGGGCACTTATCCAAGGTCACACAGCCAGTCAGAGGATTGTAACCTGTCTGACCTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR TCA 90 bp TTAGCCAGGATCCAAAGAGATTCTCTGAGGCCTTCATGGAAGAAAGAGTATTTGTCTCCAGCTGGAAGTTaGACTCATACTCCATGGGGT +
Preference number: 2 (lower is better)
Translates to: LARIQRDSLRPSWKKEYLSPAGS*THTPWG
Trigger: ACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGA...CAAATACTCTTTCTTCCATGAAGGCCTCAGAGAATCTCTTTGGATCCTGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CCA 90 bp GTCTGGCTGGAAGGAAAAAGGCTCTTAAATGTGGATCCAAACCCAATGATATTGTGGGGAATGTCTTTGTaGAGGCGTTTTCGAATGATT +
Preference number: 2 (lower is better)
Translates to: VWLEGKRLLNVDPNPMILWGMSL*RRFRMI
Trigger: AATCATTCGAAAACGCCTCCACAAAGACATTCCCCA...CAATATCATTGGGTTTGGATCCACATTTAAGAGCCTTTTTCCTTCCAGCCAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR GCA 72 bp GACCCCTGCTCGATCTCGCCCTCGCGCTCCGCCAGCTaGTCGAAGTCGCGGATGATGGCGCGGGCCGCCAGG +
Preference number: 3 (lower is better)
Translates to: DPCSISPSRSAS*SKSRMMARAAR
Trigger: CCTGGCGGCCCGCGCCATCATCCGCGACTTCGAGCAGCTGGCGGAGCGCGAGGGCGAGATCGAGCAGGGGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 72 bp CAGGACGGGTGCCTAGGCGGGGAGCTGGTGCACAGCTaGGGACTCGGGGTCTTGGACTCAGACGGGCGGGTG +
Preference number: 3 (lower is better)
Translates to: QDGCLGGELVHS*GLGVLDSDGRV
Trigger: CACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCCAGCTGTGCACCAGCTCCCCGCCTAGGCACCCGTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR GCA 72 bp CACCGTGGCCCACAGCTTCCCAGTGTGCTCCACCACTaGCCTCGGCTCCAGGCCCAGCTTGCCCTTGGCCAG +
Preference number: 3 (lower is better)
Translates to: HRGPQLPSVLHH*PRLQAQLALGQ
Trigger: CTGGCCAAGGGCAAGCTGGGCCTGGAGCCGAGGGCAGTGGTGGAGCACACTGGGAAGCTGTGGGCCACGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CCA 72 bp GGGCCTGCTGGGACTGGCTCGCTCCTGGGACTCGGCTaGGGGGTCCCAGTCCGAGGACGTCTCTGTCTCGAA +
Preference number: 3 (lower is better)
Translates to: GPAGTGSLLGLG*GVPVRGRLCLE
Trigger: TTCGAGACAGAGACGTCCTCGGACTGGGACCCCCCAGCCGAGTCCCAGGAGCGAGCCAGTCCCAGCAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CAA 90 bp AGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACATGGGGACTCGGGGTCTaGGACTCAGACGGGCGGGTG +
Preference number: 3 (lower is better)
Translates to: SRRPNCAPAMPAPPPWPTWGLGV*DSDGRV
Trigger: CACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCCA...TGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR TCA 72 bp GCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTaGGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCT +
Preference number: 3 (lower is better)
Translates to: AAEAQTAGGQRP*VCPACGPRVLP
Trigger: AGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR GCA 72 bp GCCAGAGGCTCCAGGGAGAAGCTGTCACAGGACGGGTaGCTAGGCGGGGAGCTGGTGCACAGCTGGGGACTC +
Preference number: 3 (lower is better)
Translates to: ARGSREKLSQDG*LGGELVHSWGL
Trigger: GAGTCCCCAGCTGTGCACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGCTTCTCCCTGGAGCCTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR GCA 72 bp ACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTaGGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: TNSWRAAALSVP*VRPSGTSCCSS
Trigger: GCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CCA 72 bp TCGAAGTCGCGGATGATGGCGCGGGCCGCCAGGTGGTaGAAGGTCTCGCTCCATAGGTCGGCATCCTGCGCG +
Preference number: 3 (lower is better)
Translates to: SKSRMMARAARW*KVSLHRSASCA
Trigger: CGCGCAGGATGCCGACCTATGGAGCGAGACCTTCCACCACCTGGCGGCCCGCGCCATCATCCGCGACTTCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR TCA 72 bp GAGCGGGCAGATGGGGCGGCGTCGGCACGAATCTCATaGGTGGGACTCTCCACCCCTGCGAGCAGACATGGC +
Preference number: 3 (lower is better)
Translates to: ERADGAASARIS*VGLSTPASRHG
Trigger: GCCATGTCTGCTCGCAGGGGTGGAGAGTCCCACTCATGAGATTCGTGCCGACGCCGCCCCATCTGCCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 72 bp GGGCAGATGGGGCGGCGTCGGCACGAATCTCATGAGTaGGACTCTCCACCCCTGCGAGCAGACATGGCCCAC +
Preference number: 3 (lower is better)
Translates to: GQMGRRRHESHE*DSPPLRADMAH
Trigger: GTGGGCCATGTCTGCTCGCAGGGGTGGAGAGTCCCACTCATGAGATTCGTGCCGACGCCGCCCCATCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 72 bp TGCTCGAAGTCGCGGATGATGGCGCGGGCCGCCAGGTaGTGGAAGGTCTCGCTCCATAGGTCGGCATCCTGC +
Preference number: 3 (lower is better)
Translates to: CSKSRMMARAAR*WKVSLHRSASC
Trigger: GCAGGATGCCGACCTATGGAGCGAGACCTTCCACCACCTGGCGGCCCGCGCCATCATCCGCGACTTCGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR GCA 72 bp AGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTaGTCCAGCCATGAGTTGGCCTTGGCAGCCACCAAC +
Preference number: 3 (lower is better)
Translates to: SVPCVRPSGTSC*SSHELALAATN
Trigger: GTTGGTGGCTGCCAAGGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR GCA 72 bp TTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTaGTGCTCCAGCCATGAGTTGGCCTTGGCAGCCACC +
Preference number: 3 (lower is better)
Translates to: LSVPCVRPSGTS*CSSHELALAAT
Trigger: GGTGGCTGCCAAGGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp TGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGAGCCATGAGTTGGCCTaGGCAGCCACCAACTCCCAC +
Preference number: 3 (lower is better)
Translates to: CRRSTNSWRAAALSVPCVSHELA*AATNSH
Trigger: GTGGGAGTTGGTGGCTGCCAAGGCCAACTCATGGCT...CACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp GGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGCTTCCCAGGTCGGGACAGAAGTaGAGCATGATGACGGAGTGG +
Preference number: 3 (lower is better)
Translates to: GRTVLQPCQPHHRGPQLPRSGQK*SMMTEW
Trigger: CCACTCCGTCATCATGCTCAACTTCTGTCCCGACCT...GGGAAGCTGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CAA 90 bp TCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACAGAGGGGAAAGGATGTaGGTCCCACCCATGTCGGCC +
Preference number: 3 (lower is better)
Translates to: SDGRVVRDTRWQVKGDVHRGERM*VPPMSA
Trigger: GGCCGACATGGGTGGGACCAACATCCTTTCCCCTCT...GTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 72 bp ACAGCGCCATCTGTGATCACGAAGAGGAGCCGCGGGTaGCCTCGGTGCACTGGCTGCCTGATGACCCACTTG +
Preference number: 3 (lower is better)
Translates to: TAPSVITKRSRG*PRCTGCLMTHL
Trigger: CAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGTGATCACAGATGGCGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp GGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGCTTCCCTCATACTCCATGGGGTaGGACACTTCGGTGTTCAGG +
Preference number: 3 (lower is better)
Translates to: GRTVLQPCQPHHRGPQLPSYSMG*DTSVFR
Trigger: CCTGAACACCGAAGTGTCCAACCCCATGGAGTATGA...GGGAAGCTGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CAA 90 bp CTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCAGTCGACTCCACAGCTTaGATCAGTGGCTTGCTCAGG +
Preference number: 3 (lower is better)
Translates to: LRRAGGEGHSMAGEGGRPVDSTA*ISGLLR
Trigger: CCTGAGCAAGCCACTGATCAAAGCTGTGGAGTCGAC...TGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR TCA 72 bp CGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGATaGAGGGTGCCCCCGAGTTCTTGGCACAGTCTCCAC +
Preference number: 3 (lower is better)
Translates to: RWLAGHFWPALG*RVPPSSWHSLH
Trigger: GTGGAGACTGTGCCAAGAACTCGGGGGCACCCTTCATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR TCA 72 bp TCTGCCACCGCTGGACATCCAGGCTGGTCTGGTTGGTaGGGTCCTGCAGCCTGGCTTTCCGCAGTGGGTATC +
Preference number: 3 (lower is better)
Translates to: SATAGHPGWSGW*GPAAWLSAVGI
Trigger: GATACCCACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCAGACCAGCCTGGATGTCCAGCGGTGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR GCA 72 bp ACGAAGAGGAGCCGCGGGTGGCCTCGGTGCACTGGCTaGCTGATGACCCACTTGAGAGGGGAAAGGATGTTG +
Preference number: 3 (lower is better)
Translates to: TKRSRGWPRCTG*LMTHLRGERML
Trigger: CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR GCA 72 bp TCTGTGATCACGAAGAGGAGCCGCGGGTGGCCTCGGTaGACTGGCTGCCTGATGACCCACTTGAGAGGGGAA +
Preference number: 3 (lower is better)
Translates to: SVITKRSRGWPR*TGCLMTHLRGE
Trigger: TTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGTGATCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp TTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATaGCAGGTGAAGGGGGACGTCCACTTGAGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: LDSDGRVVRDTR*QVKGDVHLSFS
Trigger: GGAGAAGCTCAAGTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CCA 72 bp GATCACGAAGAGGAGCCGCGGGTGGCCTCGGTGCACTaGCTGCCTGATGACCCACTTGAGAGGGGAAAGGAT +
Preference number: 3 (lower is better)
Translates to: DHEEEPRVASVH*LPDDPLERGKD
Trigger: ATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp GCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGCCTTGGCAGTGCCTGATGACCCACTaGAGAGGGGAAAGGATGTTG +
Preference number: 3 (lower is better)
Translates to: ACGPRVLPAAPAMSWPWQCLMTH*RGERML
Trigger: CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCA...CTGCCAAGGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR GCA 72 bp GTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTaGCCTAGGATGAAGGGTGCCCCCGAGTTCTTGGCA +
Preference number: 3 (lower is better)
Translates to: VESPLASRAFLA*PRMKGAPEFLA
Trigger: TGCCAAGAACTCGGGGGCACCCTTCATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR GCA 72 bp TGGGGTACTCCACCACGGTGGGCAGGTACCGGCTCTTaGTCACGTCCACAGGCACGAAGGCTGTGTATTTGC +
Preference number: 3 (lower is better)
Translates to: WGTPPRWAGTGS*SRPQARRLCIC
Trigger: GCAAATACACAGCCTTCGTGCCTGTGGACGTGAGCAAGAGCCGGTACCTGCCCACCGTGGTGGAGTACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 72 bp TTGAGTGGGCATTGCTGTGTCCACTCCGTGCCCACGTaGTCTACCTCCAGACAGGGCTCAGGCTTCCACTGC +
Preference number: 3 (lower is better)
Translates to: LSGHCCVHSVPT*STSRQGSGFHC
Trigger: GCAGTGGAAGCCTGAGCCCTGTCTGGAGGTAGACCACGTGGGCACGGAGTGGACACAGCAATGCCCACTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR CCA 72 bp CTGGTTCCCGGAGGTCGACTCCACAGCTTTGATCAGTaGCTTGCTCAGGAAGCCCTTGGCTGCTCGCGTCAG +
Preference number: 3 (lower is better)
Translates to: LVPGGRLHSFDQ*LAQEALGCSRQ
Trigger: CTGACGCGAGCAGCCAAGGGCTTCCTGAGCAAGCCACTGATCAAAGCTGTGGAGTCGACCTCCGGGAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CCA 72 bp CAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATaGGGCGGCGTCGGCACGAATCTCATGAGTGGGACT +
Preference number: 3 (lower is better)
Translates to: QGDDDALGRAGR*GGVGTNLMSGT
Trigger: AGTCCCACTCATGAGATTCGTGCCGACGCCGCCCCATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 72 bp TCCCCGTGGGCCTTTCTCAGGCACGGCTGGACTGACTaGAGGTCGGGACAGAAGTTGAGCATGATGACGGAG +
Preference number: 3 (lower is better)
Translates to: SPWAFLRHGWTD*RSGQKLSMMTE
Trigger: CTCCGTCATCATGCTCAACTTCTGTCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAAGGCCCACGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp TGGCTTTCCGCAGTGGGTATCTCTTGGCAGCTGGCATaGGGTCACTTGCCATGGTGGCTCTTGGGAGGGGCT +
Preference number: 3 (lower is better)
Translates to: WLSAVGISWQLA*GHLPWWLLGGA
Trigger: AGCCCCTCCCAAGAGCCACCATGGCAAGTGACCCCATGCCAGCTGCCAAGAGATACCCACTGCGGAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp CAGCCTGGCTTTCCGCAGTGGGTATCTCTTGGCAGCTaGCATGGGGTCACTTGCCATGGTGGCTCTTGGGAG +
Preference number: 3 (lower is better)
Translates to: QPGFPQWVSLGS*HGVTCHGGSWE
Trigger: CTCCCAAGAGCCACCATGGCAAGTGACCCCATGCCAGCTGCCAAGAGATACCCACTGCGGAAAGCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGAGCCATGAGTTGGCCTaGGCAGCCACCAACTCCCAC +
Preference number: 3 (lower is better)
Translates to: HSLHLPARVRHPESGRRQSHELA*AATNSH
Trigger: GTGGGAGTTGGTGGCTGCCAAGGCCAACTCATGGCT...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CAA 90 bp TGGGCCAGGGCCCGAGAGCCAAGCATACGCAGGGCAGCTCCAGAGTTGGGGTACGCCTTCTTCAAGGATTaGACCATCTTGGGTTGCAGC +
Preference number: 3 (lower is better)
Translates to: WARAREPSIRRAAPELGYAFFKD*TILGCS
Trigger: GCTGCAACCCAAGATGGTCAAATCCTTGAAGAAGGC...GTACCCCAACTCTGGAGCTGCCCTGCGTATGCTTGGCTCTCGGGCCCTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CAA 90 bp CTGTTCAGCAAGGGCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCGGTGCCCCCGAGTTCTaGGCACAGTCTCCACCTTCC +
Preference number: 3 (lower is better)
Translates to: LFSKGCKSICHRWTSRLVGAPEF*AQSPPS
Trigger: GGAAGGTGGAGACTGTGCCAAGAACTCGGGGGCACC...GACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCCCTTGCTGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR TCA 72 bp GAACTCCCCGTGGGCCTTTCTCAGGCACGGCTGGACTaGCTGGAGGTCGGGACAGAAGTTGAGCATGATGAC +
Preference number: 3 (lower is better)
Translates to: ELPVGLSQARLD*LEVGTEVEHDD
Trigger: GTCATCATGCTCAACTTCTGTCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAAGGCCCACGGGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp CTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTaGGCCTTTCTCAGGCACGGCTGGACTGACTGGAGG +
Preference number: 3 (lower is better)
Translates to: LLLLSMRKMNSP*AFLRHGWTDWR
Trigger: CCTCCAGTCAGTCCAGCCGTGCCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp CACCAACTCCCACTCAGTGAAGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGAAGGGGGACGTCCACTaGAGCTTCTCCATGGGGATG +
Preference number: 3 (lower is better)
Translates to: HQLPLSEVGGRTVLQPCQKGDVH*SFSMGM
Trigger: CATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCTT...CTGGCATGGCTGGAGCACAGTTCGGCCTCCTACTTCACTGAGTGGGAGTTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp CTGCCCTCGGACACAGATGCCAGTCCTTTCACCAGTCTGTGGCAGACGTTGGGTAAGGGGGACGTCCACTaGAGCTTCTCCATGGGGATG +
Preference number: 3 (lower is better)
Translates to: LPSDTDASPFTSLWQTLGKGDVH*SFSMGM
Trigger: CATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCTT...ACCCAACGTCTGCCACAGACTGGTGAAAGGACTGGCATCTGTGTCCGAGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CAA 90 bp CCGTGCCCACGTGGTCTACCTCCAGACAGGGCTCAGGCTTCCACTGCATCTTCCTGGATGGTAGCAAAGTaGGGATTGAACTCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: PCPRGLPPDRAQASTASSWMVAK*GLNSGL
Trigger: GAGGCCTGAGTTCAATCCCAACTTTGCTACCATCCA...GGAAGATGCAGTGGAAGCCTGAGCCCTGTCTGGAGGTAGACCACGTGGGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR-3UTR CAA 90 bp GTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGCCGCGGGTGGCCTCGGATCTCCAGCTGGAAGTaGAACTCATACTCCATGGGG +
Preference number: 3 (lower is better)
Translates to: VLLTAPSVITKRSRGWPRISSWK*NSYSMG
Trigger: CCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGAT...CCGAGGCCACCCGCGGCTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR TCA 72 bp ATGAGTTGGCCTTGGCAGCCACCAACTCCCACTCAGTaGAGTAGGAGGCCGAACTGTGCTCCAGCCATGCCA +
Preference number: 3 (lower is better)
Translates to: MSWPWQPPTPTQ*SRRPNCAPAMP
Trigger: TGGCATGGCTGGAGCACAGTTCGGCCTCCTACTTCACTGAGTGGGAGTTGGTGGCTGCCAAGGCCAACTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CCA 72 bp GGCCCAGACGGGGGCAGGCACTGGCCTAAAGTTGCATaGCTGGATGGTAGCAAAGTTGGGATTGAACTCAGG +
Preference number: 3 (lower is better)
Translates to: GPDGGRHWPKVA*LDGSKVGIELR
Trigger: CCTGAGTTCAATCCCAACTTTGCTACCATCCAGCCATGCAACTTTAGGCCAGTGCCTGCCCCCGTCTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR CCA 72 bp AAGATGAACTCCCCGTGGGCCTTTCTCAGGCACGGCTaGACTGACTGGAGGTCGGGACAGAAGTTGAGCATG +
Preference number: 3 (lower is better)
Translates to: KMNSPWAFLRHG*TDWRSGQKLSM
Trigger: CATGCTCAACTTCTGTCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAAGGCCCACGGGGAGTTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp AAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCTaGTTGGTGAGGTCCTGCAGCCTGGCTTTCCGCAGT +
Preference number: 3 (lower is better)
Translates to: KSICHRWTSRLV*LVRSCSLAFRS
Trigger: ACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp CTGTTCAGCAAGGGCTGCAAATCAATCTGCCACCGCTaGACATCCAGGCTGGTCTGGTTGGTGAGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: LFSKGCKSICHR*TSRLVWLVRSC
Trigger: GCAGGACCTCACCAACCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCCCTTGCTGAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 72 bp AGGCAGATGAAGGCCTGCAAATCAATCTGCCACCGCTaGACATCCAGGCTGGTCTGGTTGGTGAGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: RQMKACKSICHR*TSRLVWLVRSC
Trigger: GCAGGACCTCACCAACCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGGCCTTCATCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR CAA 90 bp ATTTCGCACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATAGAGGGGAAAGGATGTaGGTCCCACCCATGTCGGCC +
Preference number: 3 (lower is better)
Translates to: ISHQLQHLPCVVDSAICDRGERM*VPPMSA
Trigger: GGCCGACATGGGTGGGACCAACATCCTTTCCCCTCT...ATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTGCGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR TCA 72 bp CTGGGCAGTGTGTGTGCAGGGAATGAGCGAGCTTATTaGCCGGTGGGTGTCCTGATTTGGAAGGTGTCCTCG +
Preference number: 3 (lower is better)
Translates to: LGSVCAGNERAY*PVGVLIWKVSS
Trigger: CGAGGACACCTTCCAAATCAGGACACCCACCGGTCAATAAGCTCGCTCATTCCCTGCACACACACTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR GCA 72 bp TCATTTCCTGGTGCCGAATCTTCTCCAAGCATCGTCTaGGGCCTTCCAAAGCCAGAAGAGGTGCCCCTCCAC +
Preference number: 3 (lower is better)
Translates to: SFPGAESSPSIV*GLPKPEEVPLH
Trigger: GTGGAGGGGCACCTCTTCTGGCTTTGGAAGGCCGCAGACGATGCTTGGAGAAGATTCGGCACCAGGAAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 72 bp CAGACGGGGGCAGGCACTGGCCTAAAGTTGCATGGCTaGATGGTAGCAAAGTTGGGATTGAACTCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: QTGAGTGLKLHG*MVAKLGLNSGL
Trigger: GAGGCCTGAGTTCAATCCCAACTTTGCTACCATCCAGCCATGCAACTTTAGGCCAGTGCCTGCCCCCGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR CCA 72 bp ACCCCTGCGAGCAGACATGGCCCACGGATCTCCAGCTaGAAGTTGAACTCATACTCCATGGGGTTGGACACT +
Preference number: 3 (lower is better)
Translates to: TPASRHGPRISS*KLNSYSMGLDT
Trigger: AGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CAA 90 bp CCTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGACGGTCAAAGGTGTGCTaGTTGGCCAAGGTGATGATG +
Preference number: 3 (lower is better)
Translates to: PESAACCTGASCQIWDWRRSKVC*LAKVMM
Trigger: CATCATCACCTTGGCCAACAAGCACACCTTTGACCG...TCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp CTGGCCTCGCTGAAGAGAGCAGTGGGACTTGCCTCCATGTCATTTCCTGGTGCCTGGTGGGGAATGTCTTaGTGGAGGCGTTTTCGAATG +
Preference number: 3 (lower is better)
Translates to: LASLKRAVGLASMSFPGAWWGMS*WRRFRM
Trigger: CATTCGAAAACGCCTCCACAAAGACATTCCCCACCA...GGCACCAGGAAATGACATGGAGGCAAGTCCCACTGCTCTCTTCAGCGAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CAA 90 bp CTGAGCCAAGGTGGGCCCCTAAACTCTCTCCTCCCCCAGGTCTGCTATAAAGTCTGCCTGATGACCCACTaGAGAGGGGAAAGGATGTTG +
Preference number: 3 (lower is better)
Translates to: LSQGGPLNSLLPQVCYKVCLMTH*RGERML
Trigger: CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCA...GACTTTATAGCAGACCTGGGGGAGGAGAGAGTTTAGGGGCCCACCTTGGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR CAA 90 bp CTGAGCCAAGGTGGGCCCCTAAACTCTCTCCTCCCCCAGGTCTGCTATAAAGTCACCTTCCCTGTGTTGTaGACAGCGCCATCTGTGATC +
Preference number: 3 (lower is better)
Translates to: LSQGGPLNSLLPQVCYKVTFPVL*TAPSVI
Trigger: GATCACAGATGGCGCTGTCAACAACACAGGGAAGGT...GACTTTATAGCAGACCTGGGGGAGGAGAGAGTTTAGGGGCCCACCTTGGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR CAA 90 bp CACATCGCTCAGGACTGGGGCCATGGCCTTCTTCAAGGATTTGACCATCTTGGGAGCACCTTCCCTGTGTaGTTGACAGCGCCATCTGTG +
Preference number: 3 (lower is better)
Translates to: HIAQDWGHGLLQGFDHLGSTFPV*LTAPSV
Trigger: CACAGATGGCGCTGTCAACAACACAGGGAAGGTGCT...CCCAAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR TCA 72 bp CGAGCAGACATGGCCCACGGATCTCCAGCTGGAAGTTaGACTCATACTCCATGGGGTTGGACACTTCGGTGT +
Preference number: 3 (lower is better)
Translates to: RADMAHGSPAGS*THTPWGWTLRC
Trigger: ACACCGAAGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGGGCCATGTCTGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CCA 72 bp CTGGCTCTCAATTTCCACATCTGTACTGAGCCAAGGTaGGCCCCTAAACTCTCTCCTCCCCCAGGTCTGCTA +
Preference number: 3 (lower is better)
Translates to: LALNFHICTEPR*APKLSPPPGLL
Trigger: TAGCAGACCTGGGGGAGGAGAGAGTTTAGGGGCCCACCTTGGCTCAGTACAGATGTGGAAATTGAGAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR CAA 90 bp CAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTTGCTCAGGAAGCCCTaGGCTGCTCGCGTCAGTAGC +
Preference number: 3 (lower is better)
Translates to: QSILNSRFSSQCRRSTNSLLRKP*AARVSS
Trigger: GCTACTGACGCGAGCAGCCAAGGGCTTCCTGAGCAA...GCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp CCCACCCATGTCGGCCTTCATTCTCTGGATGTCATCACAAGCCATGGCCAAGCTCGGTCAAAGGTGTGCTaGTTGGCCAAGGTGATGATG +
Preference number: 3 (lower is better)
Translates to: PTHVGLHSLDVITSHGQARSKVC*LAKVMM
Trigger: CATCATCACCTTGGCCAACAAGCACACCTTTGACCG...AGCTTGGCCATGGCTTGTGATGACATCCAGAGAATGAAGGCCGACATGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp CACATCGCTCAGGACTGGGGCCATGGCCTTCTTCAAGGATTTGACCATCTTGGGACCAACATGGCATCCTaGACTCGGTGCATGCTGATC +
Preference number: 3 (lower is better)
Translates to: HIAQDWGHGLLQGFDHLGTNMAS*TRCMLI
Trigger: GATCAGCATGCACCGAGTCAAGGATGCCATGTTGGT...CCCAAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR TCA 72 bp TTGGTGATCTGGTTGGTGCTGTATGCCCTCCGTCGCTaGGAGAGGTTCAGATCGTGCTTGGTGGTAGAGTCT +
Preference number: 3 (lower is better)
Translates to: LVIWLVLYALRR*ERFRSCLVVES
Trigger: AGACTCTACCACCAAGCACGATCTGAACCTCTCTCAGCGACGGAGGGCATACAGCACCAACCAGATCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp TGTCGGCCTTCATTCTCTGGATGTCATCACAAGCCATaGCCAAGCTGTCCTCACTGTAGGTCTGGCTGGAAG +
Preference number: 3 (lower is better)
Translates to: CRPSFSGCHHKP*PSCPHCRSGWK
Trigger: CTTCCAGCCAGACCTACAGTGAGGACAGCTTGGCCATGGCTTGTGATGACATCCAGAGAATGAAGGCCGACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp AGGATGTTGGTCCCACCCATGTCGGCCTTCATTCTCTaGATGTCATCACAAGCCATGGCCAAGCTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: RMLVPPMSAFIL*MSSQAMAKLSS
Trigger: TGAGGACAGCTTGGCCATGGCTTGTGATGACATCCAGAGAATGAAGGCCGACATGGGTGGGACCAACATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp GTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACGTGATGATGATGCTCTaGGCCGAGCGGGCAGATGGG +
Preference number: 3 (lower is better)
Translates to: VIAEHIELEILIPVPQKHVMMML*AERADG
Trigger: CCCATCTGCCCGCTCGGCCAAGAGCATCATCATCAC...GTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR-3UTR CAA 90 bp CCTGATTTGGAAGGTGTCCTCGGAGGTAAGGCAGATGAAGGCCTGCAAATCAATAAGGATTTGACCATCTaGGGTTGCAGCCGCTCCCCC +
Preference number: 3 (lower is better)
Translates to: PDLEGVLGGKADEGLQINKDLTI*GCSRSP
Trigger: GGGGGAGCGGCTGCAACCCAAGATGGTCAAATCCTT...ATTGATTTGCAGGCCTTCATCTGCCTTACCTCCGAGGACACCTTCCAAATCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR TCA 72 bp TTGAGGTCACTGGGTTCTCTCATCTGCCCTTTTATTTaGGTGGGCATTGCTGTGTCCACTCCGTGCCCACGT +
Preference number: 3 (lower is better)
Translates to: LRSLGSLICPFI*VGIAVSTPCPR
Trigger: ACGTGGGCACGGAGTGGACACAGCAATGCCCACTCAAATAAAAGGGCAGATGAGAGAACCCAGTGACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR GCA 72 bp TGGGATTGGAGATGTGCAAAGAAGCATCACATACAATaGCATACCCCACCAGCCGTTCTCCAGGGAAGAGGG +
Preference number: 3 (lower is better)
Translates to: WDWRCAKKHHIQ*HTPPAVLQGRG
Trigger: CCCTCTTCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCAATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp TGGAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTaGTGGGGAATGTCTTTGTGGAGGCGTTTTCGAATG +
Preference number: 3 (lower is better)
Translates to: WRSGQKLSMMTE*WGMSLWRRFRM
Trigger: CATTCGAAAACGCCTCCACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp CAGATGCCAGTCCTTTCACCAGTCTGTGGCAGACGTTaGGTCCAATTCCAAAGCTATAGCACCTGGTGGAGA +
Preference number: 3 (lower is better)
Translates to: QMPVLSPVCGRR*VQFQSYSTWWR
Trigger: TCTCCACCAGGTGCTATAGCTTTGGAATTGGACCCAACGTCTGCCACAGACTGGTGAAAGGACTGGCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp AGGGAAGATCCACTCCACAGTCACATCGCTCAGGACTaGGGCCATGGCCTTCTTCAAGGATTTGACCATCTT +
Preference number: 3 (lower is better)
Translates to: REDPLHSHIAQD*GHGLLQGFDHL
Trigger: AAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTGACTGTGGAGTGGATCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp ACTGGGTTCTCTCATCTGCCCTTTTATTTGAGTGGGCATTGCTGTGTCCACTCCGGCACTGGCCTAAAGTaGCATGGCTGGATGGTAGCA +
Preference number: 3 (lower is better)
Translates to: TGFSHLPFYLSGHCCVHSGTGLK*HGWMVA
Trigger: TGCTACCATCCAGCCATGCAACTTTAGGCCAGTGCC...GGAGTGGACACAGCAATGCCCACTCAAATAAAAGGGCAGATGAGAGAACCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR-3UTR CAA 90 bp CCTGATTTGGAAGGTGTCCTCGGAGGTAAGGCAGATGAAGGCCTGCAAATCAATAGGTTCAGATCGTGCTaGGTGGTAGAGTCTCCGCTG +
Preference number: 3 (lower is better)
Translates to: PDLEGVLGGKADEGLQINRFRSC*VVESPL
Trigger: CAGCGGAGACTCTACCACCAAGCACGATCTGAACCT...ATTGATTTGCAGGCCTTCATCTGCCTTACCTCCGAGGACACCTTCCAAATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR CAA 90 bp CTCTATGTGCCTATGCAAGCCTGTAGGCCTGGTTACTTGAGGTCACTGGGTTCTGAACCACTGAACCATTaGAGATCCACTCCACCTCCT +
Preference number: 3 (lower is better)
Translates to: LYVPMQACRPGYLRSLGSEPLNH*RSTPPP
Trigger: AGGAGGTGGAGTGGATCTCAAATGGTTCAGTGGTTC...AGAACCCAGTGACCTCAAGTAACCAGGCCTACAGGCTTGCATAGGCACATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR-3UTR CAA 90 bp AGTCAAATGAAAGAGCACATGCAAATGTTCCTTGCCAACTGGGCAGTGTGTGTGGCTAGCCGGGCATTTTaGGCCTGCCCTAGGATGAAG +
Preference number: 3 (lower is better)
Translates to: SQMKEHMQMFLANWAVCVASRAF*ACPRMK
Trigger: CTTCATCCTAGGGCAGGCCAAAAATGCCCGGCTAGC...CACACACACTGCCCAGTTGGCAAGGAACATTTGCATGTGCTCTTTCATTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR GCA 72 bp TACCGGCGCCTCTTGTCAGATCTGGGATTGGAGATGTaGAAAGAAGCATCACATACAATGCCATACCCCACC +
Preference number: 3 (lower is better)
Translates to: YRRLLSDLGLEM*KEASHTMPYPT
Trigger: GGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCAATCCCAGATCTGACAAGAGGCGCCGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp TGTGGATCCAAACCCAATGATATTGAAGAGGCAGGCTaGCATGAGGCTCTTAAGGGCCACCAACATGGCATC +
Preference number: 3 (lower is better)
Translates to: CGSKPNDIEEAG*HEALKGHQHGI
Trigger: GATGCCATGTTGGTGGCCCTTAAGAGCCTCATGCCAGCCTGCCTCTTCAATATCATTGGGTTTGGATCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp GTGTCTGCAGACATTTTTGGTTGTCATGATTGGGGATaGTGTTATTCCCAGGAGGCCTCTAGCGAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: VSADIFGCHDWG*CYSQEASSEQR
Trigger: CCTCTGCTCGCTAGAGGCCTCCTGGGAATAACACCATCCCCAATCATGACAACCAAAAATGTCTGCAGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR CAA 90 bp CTCTATGTGCCTATGCAAGCCTGTAGGCCTGGTTACTTGAGGTCACTGGGTTCTCATCTGCCCTTTTATTaGAGTGGGCATTGCTGTGTC +
Preference number: 3 (lower is better)
Translates to: LYVPMQACRPGYLRSLGSHLPFY*SGHCCV
Trigger: GACACAGCAATGCCCACTCAAATAAAAGGGCAGATG...AGAACCCAGTGACCTCAAGTAACCAGGCCTACAGGCTTGCATAGGCACATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR CCA 72 bp AGGTCGGGACAGAAGTTGAGCATGATGACGGAGTGGTaGGGAATGTCTTTGTGGAGGCGTTTTCGAATGATT +
Preference number: 3 (lower is better)
Translates to: RSGQKLSMMTEW*GMSLWRRFRMI
Trigger: AATCATTCGAAAACGCCTCCACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp TCAGATCTGGGATTGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCTTCCCTGTGTTGTaGACAGCGCCATCTGTGATC +
Preference number: 3 (lower is better)
Translates to: SDLGLEMCKEASHTMPYPTFPVL*TAPSVI
Trigger: GATCACAGATGGCGCTGTCAACAACACAGGGAAGGT...GGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCAATCCCAGATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR TCA 72 bp CCTCCTGGCTGCCAGTCCAGGGCTCTTTCTAGTAACTaGAATATTAGTTACAGCTCCAAAAGCTCCCCGAAA +
Preference number: 3 (lower is better)
Translates to: PPGCQSRALSSN*NISYSSKSSPK
Trigger: TTTCGGGGAGCTTTTGGAGCTGTAACTAATATTTCAGTTACTAGAAAGAGCCCTGGACTGGCAGCCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR CCA 72 bp TTGAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTaGAGGCGTTTTCGAATGATTTCTGTCTTCCGCTCT +
Preference number: 3 (lower is better)
Translates to: LSMMTEWWGMSL*RRFRMISVFRS
Trigger: AGAGCGGAAGACAGAAATCATTCGAAAACGCCTCCACAAAGACATTCCCCACCACTCCGTCATCATGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CCA 72 bp AATTATCGTGTCCATGGTGCTGAGGCTGAGAAACCCTaGCCTAGCTGTGGCTCTCTAACTCTCAAATTCTCT +
Preference number: 3 (lower is better)
Translates to: NYRVHGAEAEKP*PSCGSLTLKFS
Trigger: AGAGAATTTGAGAGTTAGAGAGCCACAGCTAGGCCAGGGTTTCTCAGCCTCAGCACCATGGACACGATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR CAA 90 bp CGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCAAAGAGATTCTCTAGTAGCCTGGACTTGTaGAGATTTAGCCAGGATCCA +
Preference number: 3 (lower is better)
Translates to: RVSSLDLLRFSQDPKRFSSSLDL*RFSQDP
Trigger: TGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACT...AGAGAATCTCTTTGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR-3UTR CAA 90 bp AGAATTGCCCCCAAATATAAAATTATCGTGTCCATGGTGCTGAGGCTGAGAAACTGTAATCCCAGTGCTTaGGGAGTTCGAGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: RIAPKYKIIVSMVLRLRNCNPSA*GVRGRW
Trigger: CCACCTGCCTCGAACTCCCAAAGCACTGGGATTACA...GTTTCTCAGCCTCAGCACCATGGACACGATAATTTTATATTTGGGGGCAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR-3UTR CAA 90 bp TTAGCCAGGATCCAAAGAGATTCTCTGAGGCCTTCATGGAAGAAAGAGTATTTGAGAGAGCAGTGGGACTaGCCTCCATGTCAGCAATTT +
Preference number: 3 (lower is better)
Translates to: LARIQRDSLRPSWKKEYLREQWD*PPCQQF
Trigger: AAATTGCTGACATGGAGGCAAGTCCCACTGCTCTCT...CAAATACTCTTTCTTCCATGAAGGCCTCAGAGAATCTCTTTGGATCCTGGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467486.5
3UTR GCA 72 bp AGCAGAGGCCAAGGGATGCTGCCGAACATTCTACAGTaGACAGAATTGCCCCCAAATATAAAATTATCGTGT +
Preference number: 3 (lower is better)
Translates to: SRGQGMLPNILQ*TELPPNIKLSC
Trigger: ACACGATAATTTTATATTTGGGGGCAATTCTGTGCACTGTAGAATGTTCGGCAGCATCCCTTGGCCTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp TGCGCTGGGGACCTTCAGAAGCACCGTGCTTCTCGCGGCCGGGGGACCTGGCCTGGGTGGCGGGCCTGCTaGGACTGGCTCGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CAGDLQKHRASRGRGTWPGWRAC*DWLAPG
Trigger: CCCAGGAGCGAGCCAGTCCCAGCAGGCCCGCCACCC...AGGCCAGGTCCCCCGGCCGCGAGAAGCACGGTGCTTCTGAAGGTCCCCAGCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCCGGGGTGGCGGGCCTaGTGGGACTGGCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QKHKQLAGSGLECALRAAPGWRA*WDWLAP
Trigger: AGGAGCGAGCCAGTCCCAGCAGGCCCGCCACCCCGG...GGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp AGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGCCGAGCGGGCAGATaGGGCGGCGTCGGCACGAAT +
Preference number: 4 (lower is better)
Translates to: STNSWRAAALSVPCVRPSGRAGR*GGVGTN
Trigger: ATTCGTGCCGACGCCGCCCCATCTGCCCGCTCGGCC...CGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCGGGGACTCGGGGTCTTaGACTCAGACGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: RAAALSVPCVRPSGTSCCGDSGS*TQTGGW
Trigger: CCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCC...GCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCCTTCAGAAGCACCGTaGTTCTCGCGGCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: AGSGLECALRAALGYFLLPSEAP*FSRPGD
Trigger: GTCCCCCGGCCGCGAGAAGCACGGTGCTTCTGAAGG...CAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGAGTGTGCTCCACCACTaGCCTCGGCTCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AGSGLECALRAALGYFLLSVLHH*PRLQAQ
Trigger: CTGGGCCTGGAGCCGAGGGCAGTGGTGGAGCACACT...CAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGCCCTCACAGCCCCGCTaGGCAGCGTTGGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: VGGRTVLQPCQPHHRGPQPSQPR*AALGAP
Trigger: CGGAGCTCCCAACGCTGCCCAGCGGGGCTGTGAGGG...CTGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGGTGCACAGCTGGGGACTCGGCTCCTGGGACTCGGCTaGGGGGTCCCAGTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: AVTGRVPRRGAGAQLGTRLLGLG*GVPVRG
Trigger: TCCTCGGACTGGGACCCCCCAGCCGAGTCCCAGGAG...CCGAGTCCCCAGCTGTGCACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTGCACAGCTGGGGACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACCGGGCCTGCTGGGACTaGCTCGCTCCTGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: VHSWGLGVLDSDGRVVRDRACWD*LAPGTR
Trigger: CCGAGTCCCAGGAGCGAGCCAGTCCCAGCAGGCCCG...GTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCCAGCTGTGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TTGGTAGCGGCGGTTGGACCCCTGCTCGATCTCGCCCTCGCGCTCCGCCAGCTGGGGGACTCGGGGTCTTaGACTCAGACGGGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LVAAVGPLLDLALALRQLGDSGS*TQTGGW
Trigger: CCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCC...CAGCTGGCGGAGCGCGAGGGCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp ACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTCCGGGGTGGCGGGCCTaGTGGGACTGGCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: TRGLGLRRAGGEGHSMAGPGWRA*WDWLAP
Trigger: AGGAGCGAGCCAGTCCCAGCAGGCCCGCCACCCCGG...ACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGCTTCCCAGTGTGCTCCACCACTaGCCTCGGCTCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GRTVLQPCQPHHRGPQLPSVLHH*PRLQAQ
Trigger: CTGGGCCTGGAGCCGAGGGCAGTGGTGGAGCACACT...GGGAAGCTGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp TTGGTAGCGGCGGTTGGACCCCTGCTCGATCTCGCCCTCGCGCTCCGCCAGCTGTGGCCTGCCCTAGGATaGAGGGTGCCCCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LVAAVGPLLDLALALRQLWPALG*RVPPSS
Trigger: AGAACTCGGGGGCACCCTTCATCCTAGGGCAGGCCA...CAGCTGGCGGAGCGCGAGGGCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp AGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGCTGGTCTGGTTGGTaGGGTCCTGCAGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: STNSWRAAALSVPCVRPSGWSGW*GPAAWL
Trigger: AAGCCAGGCTGCAGGACCTCACCAACCAGACCAGCC...CGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCCCCTGGTTCAGGTCCTaGCCACTGTTCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: RAAALSVPCVRPSGTSCCPWFRS*PLFSKG
Trigger: GCCCTTGCTGAACAGTGGTCAGGACCTGAACCAGGG...GCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCCACAGAAGGCTTCGTTaGGCAGGAAGGCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: RAAALSVPCVRPSGTSCCHRRLR*AGRLRR
Trigger: CCTCCGGAGCCTTCCTGCTCAACGAAGCCTTCTGTG...GCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp ACGAAGAGGAGCCGCGGGTGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGCGCGGGTGGCCTCGGTaGACTGGCTGCCTGATGACC +
Preference number: 4 (lower is better)
Translates to: TKRSRGWPRCTGCLMTHLRGWPR*TGCLMT
Trigger: GGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCG...CAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGTACACGAAGAGGCCCTaGAAGGGCTGGGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AGSGLECALRAALGYFLLYTKRP*KGWASR
Trigger: CCTGGAAGCCCAGCCCTTCCAGGGCCTCTTCGTGTA...CAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACTTGAGGCGCGGGCCGCCAGGTaGTGGAAGGTCTCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RAGGEGHSMAGEGGRPLEARAAR*WKVSLH
Trigger: ATGGAGCGAGACCTTCCACCACCTGGCGGCCCGCGC...CTCAAGTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp ACGAAGAGGAGCCGCGGGTGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGGTGCCCCTCCACTGTTaGGCCAGGGCCCGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: TKRSRGWPRCTGCLMTHLVPLHC*ARAREP
Trigger: TGGCTCTCGGGCCCTGGCCCAACAGTGGAGGGGCAC...CAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CAA 72 bp TGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTaGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCC +
Preference number: 4 (lower is better)
Translates to: CRRSTNSWRAAA*SVPCVRPSGTS
Trigger: GGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGTGGTTGGTGAGGTCCTaGAGCCTGGCTTTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: AGSGLECALRAALGYFLLWLVRS*SLAFRS
Trigger: ACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCA...CAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GCCAGAGGCTCCAGGGAGAAGCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGAGGCGTTGGCTGTCGTaGAGGCCTTTGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ARGSREKLSQDGCLGGELRRWLS*RPLTRA
Trigger: GGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCT...CAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGCTTCTCCCTGGAGCCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACCCTTCAGAAGCACCGTaGTTCTCGCGGCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SDGRVVRDTRWQVKGDVHPSEAP*FSRPGD
Trigger: GTCCCCCGGCCGCGAGAAGCACGGTGCTTCTGAAGG...GTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGGAGCTGGTGCACAGCTaGGGACTCGGGGTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: VGGRTVLQPCQPHHRGPQELVHS*GLGVLD
Trigger: GTCCAAGACCCCGAGTCCCCAGCTGTGCACCAGCTC...CTGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CAA 72 bp GGTCCCCAGCTCGAAGCTCACCTCCCACTGCAGGCGTaGGCTGTCGTGCAGGCCTTTGACCAGGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GPQLEAHLPLQA*AVVQAFDQGLA
Trigger: GGCAAGGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCTGCAGTGGGAGGTGAGCTTCGAGCTGGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp TGCGCTGGGGACCTTCAGAAGCACCGTGCTTCTCGCGGCCGGGGGACCTGGCCTTCGGCACGAATCTCATaGGTGGGACTCTCCACCCCT +
Preference number: 4 (lower is better)
Translates to: CAGDLQKHRASRGRGTWPSARIS*VGLSTP
Trigger: AGGGGTGGAGAGTCCCACTCATGAGATTCGTGCCGA...AGGCCAGGTCCCCCGGCCGCGAGAAGCACGGTGCTTCTGAAGGTCCCCAGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp CACCACCGTGGCCCACAGCTTCCCAGTGTGCTCCACCACTGCCCTCGGCTCCAGCCCTGGTTCAGGTCCTaGCCACTGTTCAGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: HHRGPQLPSVLHHCPRLQPWFRS*PLFSKG
Trigger: GCCCTTGCTGAACAGTGGTCAGGACCTGAACCAGGG...CTGGAGCCGAGGGCAGTGGTGGAGCACACTGGGAAGCTGTGGGCCACGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp GAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTCGACTCCACAGGGCGGGCAGCGGCCTTaGGTGTGCCCTGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: ETPEVCSRSSGSRRSTPQGGQRP*VCPACG
Trigger: GCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCC...CTGTGGAGTCGACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CAGAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTCGACTCCACGGCGGGCAGCGGCCTTaGGTGTGCCCTGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: QRHQRYVVEALVPGGRLHGGQRP*VCPACG
Trigger: GCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCC...GTGGAGTCGACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGAGAGGGGAAAGGATGTTGGGGGCTGGGCTCCAGTaGCCAAGCCCTGCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: WPRCTGCLMTHLRGERMLGAGLQ*PSPAPA
Trigger: AGCGGGCGCAGGGCTTGGGCACTGGAGCCCAGCCCC...CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TTGGTAGCGGCGGTTGGACCCCTGCTCGATCTCGCCCTCGCGCTCCGCCAGCTGTGCCAGTGCTCTTGGTaGAGAACTGGGGCACGGTTG +
Preference number: 4 (lower is better)
Translates to: LVAAVGPLLDLALALRQLCQCSW*RTGARL
Trigger: CAACCGTGCCCCAGTTCTGCACCAAGAGCACTGGCA...CAGCTGGCGGAGCGCGAGGGCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp CACCACCGTGGCCCACAGCTTCCCAGTGTGCTCCACCACTGCCCTCGGCTCCAGGCAGGTACCGGCTCTTaGTCACGTCCACAGGCACGA +
Preference number: 4 (lower is better)
Translates to: HHRGPQLPSVLHHCPRLQAGTGS*SRPQAR
Trigger: TCGTGCCTGTGGACGTGAGCAAGAGCCGGTACCTGC...CTGGAGCCGAGGGCAGTGGTGGAGCACACTGGGAAGCTGTGGGCCACGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GCCAGAGGCTCCAGGGAGAAGCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGGCTCCGGAGGCCAGCTaGAGAGACACCAGAGGTATG +
Preference number: 4 (lower is better)
Translates to: ARGSREKLSQDGCLGGELAPEAS*RDTRGM
Trigger: CATACCTCTGGTGTCTCTGCAGCTGGCCTCCGGAGC...CAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGCTTCTCCCTGGAGCCTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp ACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTCTGTCACAGGACGGGTaGCTAGGCGGGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TRGLGLRRAGGEGHSMAGLSQDG*LGGELV
Trigger: CACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAG...ACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TGCAGGCGTTGGCTGTCGTGCAGGCCTTTGACCAGGGCCTTGCCCAGCACCGGGAGCCGGGCATCCCGCTaGCTACTCAGCCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: CRRWLSCRPLTRALPSTGSRASR*LLSLQN
Trigger: GTTCTGAAGGCTGAGTAGCCAGCGGGATGCCCGGCT...CCCGGTGCTGGGCAAGGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGGTGCACAGCTGGGGACTCGGGGTCACTTGCCATGGTaGCTCTTGGGAGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AVTGRVPRRGAGAQLGTRGHLPW*LLGGAC
Trigger: ACAAGCCCCTCCCAAGAGCCACCATGGCAAGTGACC...CCGAGTCCCCAGCTGTGCACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TGCGCTGGGGACCTTCAGAAGCACCGTGCTTCTCGCGGCCGGGGGACCTGGCCTCCTGGCTTTCCGCAGTaGGTATCTCTTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CAGDLQKHRASRGRGTWPPGFPQ*VSLGSW
Trigger: CCAGCTGCCAAGAGATACCCACTGCGGAAAGCCAGG...AGGCCAGGTCCCCCGGCCGCGAGAAGCACGGTGCTTCTGAAGGTCCCCAGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGCTTCCCTCGAAGGCAGAGGGATaGTGGGACGGCTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: GRTVLQPCQPHHRGPQLPSKAEG*WDGSRS
Trigger: AGATCTGGAGCCGTCCCACCATCCCTCTGCCTTCGA...GGGAAGCTGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGGGGTGGCGGGCCTGCTaGGACTGGCTCGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HSLHLPARVRHPESGRRQGWRAC*DWLAPG
Trigger: CCCAGGAGCGAGCCAGTCCCAGCAGGCCCGCCACCC...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GAAGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCAGGGCAGCTCCAGAGTTaGGGTACTCCACCACGGTGG +
Preference number: 4 (lower is better)
Translates to: EVGGRTVLQPCQPHHRGPGQLQS*GTPPRW
Trigger: CCACCGTGGTGGAGTACCCCAACTCTGGAGCTGCCC...TGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GGACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTAGCCAGGCTGCGCTaGGGACCTTCAGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: GLGVLDSDGRVVRDTRWQVARLR*GPSEAP
Trigger: CGGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTAC...CTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGGTGCACAGCTGGGGACTCGGGCCATGAGTTGGCCTTaGCAGCCACCAACTCCCACT +
Preference number: 4 (lower is better)
Translates to: AVTGRVPRRGAGAQLGTRAMSWP*QPPTPT
Trigger: AGTGGGAGTTGGTGGCTGCCAAGGCCAACTCATGGC...CCGAGTCCCCAGCTGTGCACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp TGCAGGCGTTGGCTGTCGTGCAGGCCTTTGACCAGGGCCTTGCCCAGCACCGGGGAGCTGCCAGACTCCTaGGAGTGCAGCATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: CRRWLSCRPLTRALPSTGELPDS*ECSMLY
Trigger: GTACAGCATGCTGCACTCTCAGGAGTCTGGCAGCTC...CCCGGTGCTGGGCAAGGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp ACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTTGGCCTGCCCTAGGATaGAGGGTGCCCCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: TRGLGLRRAGGEGHSMAGWPALG*RVPPSS
Trigger: AGAACTCGGGGGCACCCTTCATCCTAGGGCAGGCCA...ACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GTGCACAGCTGGGGACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACCCTGAGAGTGCAGCATaGTGTACCGGCGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VHSWGLGVLDSDGRVVRDPESAA*CTGASC
Trigger: ACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGG...GTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCCAGCTGTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCAAAGCCGATCACCGTaGTGCACTCATCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: QKHKQLAGSGLECALRAAQSRSP*CTHPGG
Trigger: ACCCCCTGGATGAGTGCACCACGGTGATCGGCTTTG...GGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGCCCTCACAGCCCCGCTaGGCAGCGTTGGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: HSLHLPARVRHPESGRRQPSQPR*AALGAP
Trigger: CGGAGCTCCCAACGCTGCCCAGCGGGGCTGTGAGGG...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp ACGAAGAGGAGCCGCGGGTGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGAGGACATGGGGCATATaGGGCTCGCTGGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: TKRSRGWPRCTGCLMTHLRTWGI*GSLGWM
Trigger: CATCCACCCCAGCGAGCCCCATATGCCCCATGTCCT...CAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCTCTTGGCAGCTGGCATaGGGTCACTTGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: QKHKQLAGSGLECALRAASWQLA*GHLPWW
Trigger: CCACCATGGCAAGTGACCCCATGCCAGCTGCCAAGA...GGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGGCAGTGGGTATCTCTTaGCAGCTGGCATGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: VGGRTVLQPCQPHHRGPQAVGIS*QLAWGH
Trigger: GTGACCCCATGCCAGCTGCCAAGAGATACCCACTGC...CTGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGACATCCAGGCTGGTCTaGTTGGTGAGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VGGRTVLQPCQPHHRGPQTSRLV*LVRSCS
Trigger: GCTGCAGGACCTCACCAACCAGACCAGCCTGGATGT...CTGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTGCACAGCTGGGGACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACAAGGCAGAGGGATGGTaGGACGGCTCCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: VHSWGLGVLDSDGRVVRDKAEGW*DGSRSP
Trigger: TGGAGATCTGGAGCCGTCCCACCATCCCTCTGCCTT...GTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCCAGCTGTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGTCGAAGGCAGAGGGATaGTGGGACGGCTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: VGGRTVLQPCQPHHRGPQSKAEG*WDGSRS
Trigger: AGATCTGGAGCCGTCCCACCATCCCTCTGCCTTCGA...CTGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGTCCCACTGCAGGCGTTaGCTGTCGTGCAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: VCPACGPRVLPAAPAMSWSHCRR*LSCRPL
Trigger: CAAAGGCCTGCACGACAGCCAACGCCTGCAGTGGGA...CCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp AGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGGCGCGGGCCGCCAGGTaGTGGAAGGTCTCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RFSSQCRRSTNSWRAAALARAAR*WKVSLH
Trigger: ATGGAGCGAGACCTTCCACCACCTGGCGGCCCGCGC...CAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTGCACAGCTGGGGACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACAGAAGCACAAACAGCTaGCGGGCAGCGGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: VHSWGLGVLDSDGRVVRDRSTNS*RAAALS
Trigger: ACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCT...GTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCCAGCTGTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CAA 72 bp GATGTTGCAGGCCTTGCTGGTGTGCAAGGCGCTCACTaGGTAGCGGCGGTTGGACCCCTGCTCGATCTCGCC +
Preference number: 4 (lower is better)
Translates to: DVAGLAGVQGAH*VAAVGPLLDLA
Trigger: GGCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAAGTGAGCGCCTTGCACACCAGCAAGGCCTGCAACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp GAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGCAGGGCTGCCCCCGTaGTCCAATTCAGCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: EILIPVPQKHKQLAGSGLAGLPP*SNSASR
Trigger: CCGGCTTGCTGAATTGGATCACGGGGGCAGCCCTGC...AAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp CGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACTTGAGGAGCTGCCAGACTCCTaGGAGTGCAGCATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: RAGGEGHSMAGEGGRPLEELPDS*ECSMLY
Trigger: GTACAGCATGCTGCACTCTCAGGAGTCTGGCAGCTC...CTCAAGTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CCCACCCATGTCGGCCTTCATTCTCTGGATGTCATCACAAGCCATGGCCAAGCTCCAGTGCCCAAGCCCTaGGCCCGCTGCCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PTHVGLHSLDVITSHGQAPVPKP*ARCPGS
Trigger: GCTGCCAGGGCAGCGGGCGCAGGGCTTGGGCACTGG...AGCTTGGCCATGGCTTGTGATGACATCCAGAGAATGAAGGCCGACATGGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGCACTGCCACAGTGACTaGCTTCTGCACCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: VCPACGPRVLPAAPAMSWHCHSD*LLHPAL
Trigger: CAGTGCTGGGTGCAGAAGGCAGTCACTGTGGCAGTG...CCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp TGCAGGCGTTGGCTGTCGTGCAGGCCTTTGACCAGGGCCTTGCCCAGCACCGGGGGCCGGTCAAAGGTGTaGTTGTTGGCCAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: CRRWLSCRPLTRALPSTGGRSKV*LLAKVM
Trigger: CATCACCTTGGCCAACAAGCACACCTTTGACCGGCC...CCCGGTGCTGGGCAAGGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp ACGAAGAGGAGCCGCGGGTGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGTCAGGAGCTCAGCACTaGCCTCGGACACAGATGCCA +
Preference number: 4 (lower is better)
Translates to: TKRSRGWPRCTGCLMTHLSGAQH*PRTQMP
Trigger: TGGCATCTGTGTCCGAGGGCAGTGCTGAGCTCCTGA...CAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTTCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCCTGAGAGTGCAGCATaGTGTACCGGCGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: CRRSTNSWRAAALSVPCVPESAA*CTGASC
Trigger: ACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGG...CACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGTGGCATGGGGTCACTTaGCATGGTGGCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VCPACGPRVLPAAPAMSWWHGVT*HGGSWE
Trigger: CTCCCAAGAGCCACCATGGCAAGTGACCCCATGCCA...CCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GAAGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCATCGGGTACTTCCTGCTaGTCCAGCCATGAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EVGGRTVLQPCQPHHRGPSGTSC*SSHELA
Trigger: GGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGA...TGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGCCCTCGGGTACTTCCTaGTGCTCCAGCCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: VCPACGPRVLPAAPAMSWPSGTS*CSSHEL
Trigger: CAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGG...CCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GAAGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCATGCCTGTCTTTGCCCTaGGCCTGTTGGTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: EVGGRTVLQPCQPHHRGPCLSLP*ACWLEV
Trigger: CACCTCCAACCAACAGGCCCAGGGCAAAGACAGGCA...TGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGGTGCACAGCTGGGGACTCGGCTTCCCTTCAAGTGCTaGTCAAACTCTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: AVTGRVPRRGAGAQLGTRLPFKC*SNSPRV
Trigger: GACCCTGGGAGAGTTTGACCAGCACTTGAAGGGAAG...CCGAGTCCCCAGCTGTGCACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp AGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGAAGAGGAGCCGCGGGTaGCCTCGGTGCACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RATNMASLTRCMLIPLMLKRSRG*PRCTGC
Trigger: GCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTT...CAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCTGCCATGGTGGCTCTTaGGAGGGGCTTGTGATTGGT +
Preference number: 4 (lower is better)
Translates to: QKHKQLAGSGLECALRAACHGGS*EGLVIG
Trigger: ACCAATCACAAGCCCCTCCCAAGAGCCACCATGGCA...GGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TGCAGGCGTTGGCTGTCGTGCAGGCCTTTGACCAGGGCCTTGCCCAGCACCGGGTGCCATGGTGGCTCTTaGGAGGGGCTTGTGATTGGT +
Preference number: 4 (lower is better)
Translates to: CRRWLSCRPLTRALPSTGCHGGS*EGLVIG
Trigger: ACCAATCACAAGCCCCTCCCAAGAGCCACCATGGCA...CCCGGTGCTGGGCAAGGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CCATCTTGGGTTGCAGCCGCTCCCCCTCCATCAGGAGCTCAGCACTGCCCTCGGGGTCACTTGCCATGGTaGCTCTTGGGAGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PSWVAAAPPPSGAQHCPRGHLPW*LLGGAC
Trigger: ACAAGCCCCTCCCAAGAGCCACCATGGCAAGTGACC...CCGAGGGCAGTGCTGAGCTCCTGATGGAGGGGGAGCGGCTGCAACCCAAGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp ACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTTGGGGTCACTTGCCATaGTGGCTCTTGGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TRGLGLRRAGGEGHSMAGWGHLP*WLLGGA
Trigger: AGCCCCTCCCAAGAGCCACCATGGCAAGTGACCCCA...ACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CCCTTGGCTGCTCGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCAGGGCCTTCGGGCCCCTaGGCCACGGAGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PLAARVSSLDLLRFSQDPGPSGP*ATEFGA
Trigger: GGCCCCAAACTCCGTGGCCCAGGGGCCCGAAGGCCC...TGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCGAGCAGCCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACATCGCTCAGGACTGGGGCCATGGCCTTCTTCAAGGATTTGACCATCTTGGGGGGCCTTCGGGCCCCTaGGCCACGGAGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: HIAQDWGHGLLQGFDHLGGPSGP*ATEFGA
Trigger: GGCCCCAAACTCCGTGGCCCAGGGGCCCGAAGGCCC...CCCAAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp ATGAGTGGGACTCTCCACCCCTGCGAGCAGACATGGCCCACGGATCTCCAGCTGCTTGGTAGCGGCGGTTaGACCCCTGCTCGATCTCGC +
Preference number: 4 (lower is better)
Translates to: MSGTLHPCEQTWPTDLQLLGSGG*TPARSR
Trigger: GCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAAG...CAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGGGTGGAGAGTCCCACTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GGACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGCCATGAGTTGGCCTTaGCAGCCACCAACTCCCACT +
Preference number: 4 (lower is better)
Translates to: GLGVLDSDGRVVRDTRWQAMSWP*QPPTPT
Trigger: AGTGGGAGTTGGTGGCTGCCAAGGCCAACTCATGGC...CTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTGCACAGCTGGGGACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACTGGAGCTGGTTCTCCTaGGTTTTGGAGGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: VHSWGLGVLDSDGRVVRDWSWFS*VLEANG
Trigger: CCCATTGGCCTCCAAAACCCAGGAGAACCAGCTCCA...GTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCCAGCTGTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CCA 90 bp TCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACGCTCAGGGGTGGAGCTaGTTCTCCTGGGTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SDGRVVRDTRWQVKGDVHAQGWS*FSWVLE
Trigger: CTCCAAAACCCAGGAGAACCAGCTCCACCCCTGAGC...GTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CCA 90 bp GGTGCCCCCGAGTTCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCGTAATCCCAGACCTTTaGGAGGCCGAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GAPEFLAQSPPSSPGPSSVIPDL*EAEAGR
Trigger: TCTGCCTGCCTCGGCCTCCCAAAGGTCTGGGATTAC...GGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGAACTCGGGGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp GCCAGAGGCTCCAGGGAGAAGCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGGGGGCTTGTGATTGGTaGTCTGGTTGGTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: ARGSREKLSQDGCLGGELGACDW*SGWCCM
Trigger: CATACAGCACCAACCAGATCACCAATCACAAGCCCC...CAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGCTTCTCCCTGGAGCCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCGGGGCTTGTGATTGGTaGTCTGGTTGGTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: QKHKQLAGSGLECALRAAGACDW*SGWCCM
Trigger: CATACAGCACCAACCAGATCACCAATCACAAGCCCC...GGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp ATGAGTGGGACTCTCCACCCCTGCGAGCAGACATGGCCCACGGATCTCCAGCTGCACAGAAGGCTTCGTTaGGCAGGAAGGCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: MSGTLHPCEQTWPTDLQLHRRLR*AGRLRR
Trigger: CCTCCGGAGCCTTCCTGCTCAACGAAGCCTTCTGTG...CAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGGGTGGAGAGTCCCACTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp CGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACTTGAGCCAACTCCCACTCAGTaGAGTAGGAGGCCGAACTGT +
Preference number: 4 (lower is better)
Translates to: RAGGEGHSMAGEGGRPLEPTPTQ*SRRPNC
Trigger: ACAGTTCGGCCTCCTACTTCACTGAGTGGGAGTTGG...CTCAAGTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CATGAGGCTCTTAAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATGGGGCTGGGCTCCAGTaGCCAAGCCCTGCGCCCGCT +
Preference number: 4 (lower is better)
Translates to: HEALKGHQHGILDSVHADGAGLQ*PSPAPA
Trigger: AGCGGGCGCAGGGCTTGGGCACTGGAGCCCAGCCCC...ATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTTAAGAGCCTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGCCTTGGCAGACGGTCGGCAATGACTaGCTCAAAGCCGATCACCGT +
Preference number: 4 (lower is better)
Translates to: ACGPRVLPAAPAMSWPWQTVGND*LKADHR
Trigger: ACGGTGATCGGCTTTGAGGCAGTCATTGCCGACCGT...CTGCCAAGGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp TTGGTAGCGGCGGTTGGACCCCTGCTCGATCTCGCCCTCGCGCTCCGCCAGCTGGTTCTTCCCTTCAAGTaGTGGTCAAACTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LVAAVGPLLDLALALRQLVLPFK*WSNSPR
Trigger: CCTGGGAGAGTTTGACCAGCACTTGAAGGGAAGAAC...CAGCTGGCGGAGCGCGAGGGCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp GAAGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCAGGCTGCAAATCAATCTaGCACCGCTGGACATCCAGG +
Preference number: 4 (lower is better)
Translates to: EVGGRTVLQPCQPHHRGPGCKSI*HRWTSR
Trigger: CCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCC...TGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp ACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGCATAGGTCGGCATCCTaGGCGCCGCCCCGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: TRCMLIPLMLLLLSMRKMHRSAS*APPRSG
Trigger: ACCGGAGCGGGGCGGCGCGCAGGATGCCGACCTATG...CATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CTGTTCAGCAAGGGCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCCCCGCTGGGCAGCGTTaGGAGCTCCGAGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LFSKGCKSICHRWTSRLVPAGQR*ELRGGA
Trigger: AGCACCTCCTCGGAGCTCCCAACGCTGCCCAGCGGG...GACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCCCTTGCTGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGGCCGAGCGGGCAGATaGGGCGGCGTCGGCACGAAT +
Preference number: 4 (lower is better)
Translates to: QLQHLPCVVDSAICDHEEGRAGR*GGVGTN
Trigger: ATTCGTGCCGACGCCGCCCCATCTGCCCGCTCGGCC...CTCTTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TGCTTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGTGGGGCTCGCTGGGGTaGATGAGGATCTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: CLVVESPLASRAFLACPRWGSLG*MRISTG
Trigger: GCCTGTGGAGATCCTCATCCACCCCAGCGAGCCCCA...CCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATGGGGCGGCGTCGCAGTGGGTATCTCTTaGCAGCTGGCATGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: VGQGDDDALGRAGRWGGVAVGIS*QLAWGH
Trigger: GTGACCCCATGCCAGCTGCCAAGAGATACCCACTGC...GACGCCGCCCCATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CGGACACAGATGCCAGTCCTTTCACCAGTCTGTGGCAGACGTTGGGTCCAATTCCGGGCCTGCTGGGACTaGCTCGCTCCTGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: RTQMPVLSPVCGRRWVQFRACWD*LAPGTR
Trigger: CCGAGTCCCAGGAGCGAGCCAGTCCCAGCAGGCCCG...GAATTGGACCCAACGTCTGCCACAGACTGGTGAAAGGACTGGCATCTGTGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GGCCAGCTGCAGAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTCGGGCCGCCAGGTGGTaGAAGGTCTCGCTCCATAGG +
Preference number: 4 (lower is better)
Translates to: GQLQRHQRYVVEALVPGGRAARW*KVSLHR
Trigger: CCTATGGAGCGAGACCTTCCACCACCTGGCGGCCCG...ACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTCTGCAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CAA 72 bp AAGGTGTGCTTGTTGGCCAAGGTGATGATGATGCTCTaGGCCGAGCGGGCAGATGGGGCGGCGTCGGCACGA +
Preference number: 4 (lower is better)
Translates to: KVCLLAKVMMML*AERADGAASAR
Trigger: TCGTGCCGACGCCGCCCCATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAACAAGCACACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CGAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTCCCTGGCAGCTGGCTTaGTCAATGCCCACATTGCGA +
Preference number: 4 (lower is better)
Translates to: RDSHPSAAEAQTAGGQRPPWQLA*SMPTLR
Trigger: TCGCAATGTGGGCATTGATCAAGCCAGCTGCCAGGG...AGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp TTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGATGCCCGGTGTGCAGGAATaGGGGGCTATGGAAACCCCG +
Preference number: 4 (lower is better)
Translates to: LVVESPLASRAFLACPRMPGVQE*GAMETP
Trigger: CGGGGTTTCCATAGCCCCTCATTCCTGCACACCGGG...CATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp TTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGATGTGGCCTGCCCTAGGATaGAGGGTGCCCCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LVVESPLASRAFLACPRMWPALG*RVPPSS
Trigger: AGAACTCGGGGGCACCCTTCATCCTAGGGCAGGCCA...CATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp GGCCAGCTGCAGAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTGGCTGGTCTGGTTGGTaGGGTCCTGCAGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GQLQRHQRYVVEALVPGGGWSGW*GPAAWL
Trigger: AAGCCAGGCTGCAGGACCTCACCAACCAGACCAGCC...ACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTCTGCAGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp TCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAGGCTGGTCTGGTTGGTaGGGTCCTGCAGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SWHSLHLPARVRHPESGRGWSGW*GPAAWL
Trigger: AAGCCAGGCTGCAGGACCTCACCAACCAGACCAGCC...TCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CCCTTGGCTGCTCGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCACAGACGGGCGGGTGGTaGGGGACACTCGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLAARVSSLDLLRFSQDPQTGGW*GTLDGR
Trigger: CCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTG...TGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCGAGCAGCCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAACAGACGGGCGGGTGGTaGGGGACACTCGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: HQLQHLPCVVDSAICDHEQTGGW*GTLDGR
Trigger: CCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTG...TTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp CGGACACAGATGCCAGTCCTTTCACCAGTCTGTGGCAGACGTTGGGTCCAATTCCGCGGGTGGCCTCGGTaGACTGGCTGCCTGATGACC +
Preference number: 4 (lower is better)
Translates to: RTQMPVLSPVCGRRWVQFRGWPR*TGCLMT
Trigger: GGTCATCAGGCAGCCAGTGCACCGAGGCCACCCGCG...GAATTGGACCCAACGTCTGCCACAGACTGGTGAAAGGACTGGCATCTGTGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GCAGGTGAAGGGGGACGTCCACTTGAGCTTCTCCATGGGGATGTGCGTGGCCTCCTGGTTGGTGCTGTATaGCCTCCGTCGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: AGEGGRPLELLHGDVRGLLVGAV*PPSLRE
Trigger: CTCTCTCAGCGACGGAGGGCATACAGCACCAACCAG...GAGGCCACGCACATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCTTCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp ATGAGTGGGACTCTCCACCCCTGCGAGCAGACATGGCCCACGGATCTCCAGCTGCTGGTTGGTGCTGTATaGCCTCCGTCGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: MSGTLHPCEQTWPTDLQLLVGAV*PPSLRE
Trigger: CTCTCTCAGCGACGGAGGGCATACAGCACCAACCAG...CAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGGGTGGAGAGTCCCACTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp GGACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGTCTCCAAGCATCGTCTaGGGCCTTCCAAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GLGVLDSDGRVVRDTRWQSPSIV*GLPKPE
Trigger: TTCTGGCTTTGGAAGGCCGCAGACGATGCTTGGAGA...CTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp AGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGAGAGCAGTGGGACTTaGCTCCATGTCATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SRRPNCAPAMPAPPPWPTESSGT*LHVISW
Trigger: CCAGGAAATGACATGGAGGCAAGTCCCACTGCTCTC...TGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp GCCAGAGGCTCCAGGGAGAAGCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGAGATTCTCATCCCAGTaGCGCAGAAGCACAAACAGC +
Preference number: 4 (lower is better)
Translates to: ARGSREKLSQDGCLGGELRFSSQ*RRSTNS
Trigger: GCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCT...CAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGCTTCTCCCTGGAGCCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCAGATTCTCATCCCAGTaGCGCAGAAGCACAAACAGC +
Preference number: 4 (lower is better)
Translates to: QKHKQLAGSGLECALRAARFSSQ*RRSTNS
Trigger: GCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCT...GGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACCACCGTGGCCCACAGCTTCCCAGTGTGCTCCACCACTGCCCTCGGCTCCAGGAAGCAACACGTGTCTaGGTACACACTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HHRGPQLPSVLHHCPRLQEATRV*VHTLSL
Trigger: GAGAGACAGAGTGTGTACCCAGACACGTGTTGCTTC...CTGGAGCCGAGGGCAGTGGTGGAGCACACTGGGAAGCTGTGGGCCACGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTAGGTGCCAGTGCTCTTaGTGCAGAACTGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: EILIPVPQKHKQLAGSGLRCQCS*CRTGAR
Trigger: CCGTGCCCCAGTTCTGCACCAAGAGCACTGGCACCT...AAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp AGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGTTGCCCTGGGCCTGTTaGTTGGAGGTGCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: RFSSQCRRSTNSWRAAALLPWAC*LEVPVL
Trigger: GAGCACTGGCACCTCCAACCAACAGGCCCAGGGCAA...CAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCATGATGACGGAGTGGTaGGGAATGTCTTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QKHKQLAGSGLECALRAAMMTEW*GMSLWR
Trigger: CCTCCACAAAGACATTCCCCACCACTCCGTCATCAT...GGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGCCGCGGGTGGCCTCGGTTTCTCAGGCACGGCTaGACTGACTGGAGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: VLLTAPSVITKRSRGWPRFLRHG*TDWRSG
Trigger: TCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAA...CCGAGGCCACCCGCGGCTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGATTGAAGAGGCAGGCTaGCATGAGGCTCTTAAGGGC +
Preference number: 4 (lower is better)
Translates to: CRRSTNSWRAAALSVPCVIEEAG*HEALKG
Trigger: GCCCTTAAGAGCCTCATGCCAGCCTGCCTCTTCAAT...CACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp ACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAAGAGGAGCCGCGGGTaGCCTCGGTGCACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TRCMLIPLMLLLLSMRKMKRSRG*PRCTGC
Trigger: GCAGCCAGTGCACCGAGGCCACCCGCGGCTCCTCTT...CATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CAGAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTCGACTCCACCGGGCCGCCAGGTGGTaGAAGGTCTCGCTCCATAGG +
Preference number: 4 (lower is better)
Translates to: QRHQRYVVEALVPGGRLHRAARW*KVSLHR
Trigger: CCTATGGAGCGAGACCTTCCACCACCTGGCGGCCCG...GTGGAGTCGACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TCGATGGCAGGTGAAGGGGGACGTCCACTTGAGCTTCTCCATGGGGATGTGCGTGGGCAGCTCCAGAGTTaGGGTACTCCACCACGGTGG +
Preference number: 4 (lower is better)
Translates to: SMAGEGGRPLELLHGDVRGQLQS*GTPPRW
Trigger: CCACCGTGGTGGAGTACCCCAACTCTGGAGCTGCCC...ACGCACATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCTTCACCTGCCATCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CTGTTCAGCAAGGGCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCGGCCCAGCTTGCCCTTaGCCAGAGGCTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LFSKGCKSICHRWTSRLVGPACP*PEAPGR
Trigger: TCTCCCTGGAGCCTCTGGCCAAGGGCAAGCTGGGCC...GACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCCCTTGCTGAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GCAGGTGAAGGGGGACGTCCACTTGAGCTTCTCCATGGGGATGTGCGTGGCCTCGCTCCAGCCATGAGTTaGCCTTGGCAGCCACCAACT +
Preference number: 4 (lower is better)
Translates to: AGEGGRPLELLHGDVRGLAPAMS*PWQPPT
Trigger: AGTTGGTGGCTGCCAAGGCCAACTCATGGCTGGAGC...GAGGCCACGCACATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCTTCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGGTGCACAGCTGGGGACTCGGTCTAGGACCATTTCCTaGTGCCGAATCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: AVTGRVPRRGAGAQLGTRSRTIS*CRIFSK
Trigger: CTTGGAGAAGATTCGGCACCAGGAAATGGTCCTAGA...CCGAGTCCCCAGCTGTGCACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CCA 90 bp ACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTTCTGAAGAGCTCCTCTaGGTTTCCACCCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: TRGLGLRRAGGEGHSMAGSEELL*VSTPSH
Trigger: GTGTGAGGGGGTGGAAACCCAGAGGAGCTCTTCAGA...ACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467486.5
3UTR CAA 72 bp AGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACTaGAGCTTCTCCATGGGGATGTGCGTGGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: RDTRWQVKGDVH*SFSMGMCVASQ
Trigger: CTGTGAGGCCACGCACATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CAA 72 bp TTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTaGGCCTGCCCTAGGATGAAGGGTGCCCCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: LVVESPLASRAF*ACPRMKGAPEF
Trigger: GAACTCGGGGGCACCCTTCATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
3UTR CAA 72 bp AGGTCCTGCAGCCTGGCTTTCCGCAGTGGGTATCTCTaGGCAGCTGGCATGGGGTCACTTGCCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RSCSLAFRSGYL*AAGMGSLAMVA
Trigger: AGCCACCATGGCAAGTGACCCCATGCCAGCTGCCAAGAGATACCCACTGCGGAAAGCCAGGCTGCAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp ACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGGCTCGCTGGGGTGGATaGGGATCTCCACAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: TRCMLIPLMLLLLSMRKMARWGG*GSPQAG
Trigger: ACCGGCCTGTGGAGATCCTCATCCACCCCAGCGAGC...CATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp AGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGCTGGTGGAGAAGGCGTaGTTTCGCACCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RATNMASLTRCMLIPLMLLVEKA*FRTSSS
Trigger: GCTGGAGCTGGTGCGAAATCACGCCTTCTCCACCAG...CAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CCATCTTGGGTTGCAGCCGCTCCCCCTCCATCAGGAGCTCAGCACTGCCCTCGGCCTTCTTCAAGGATTTaGCCATCTTGGGTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSWVAAAPPPSGAQHCPRPSSRI*PSWVAA
Trigger: GGCTGCAACCCAAGATGGTCAAATCCTTGAAGAAGG...CCGAGGGCAGTGCTGAGCTCCTGATGGAGGGGGAGCGGCTGCAACCCAAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp GAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGACCTTCAGAAGCACCGTGCTTCGCTGGCGCTGACGGGTaGGACCAGGACCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ERVFVARLRWGPSEAPCFAGADG*DQDLSG
Trigger: ACCACTGAGGTCCTGGTCTCACCCGTCAGCGCCAGC...GAAGCACGGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTACAAATACTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp TGCTTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGTATGCCCTCCGTCGCTaGGAGAGGTTCAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: CLVVESPLASRAFLACPRYALRR*ERFRSC
Trigger: GCACGATCTGAACCTCTCTCAGCGACGGAGGGCATA...CCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp TCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGACAGGCCAGAGATGAGTaGCATGCCAGCCCCGTTAGG +
Preference number: 4 (lower is better)
Translates to: SWHSLHLPARVRHPESGRQARDE*HASPVR
Trigger: CCTAACGGGGCTGGCATGTCACTCATCTCTGGCCTG...TCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp CCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTGATCCAGGCCAGAGATaGGTGACATGCCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: PAHAAAPVNEEDELPVGLDPGQR*VTCQPR
Trigger: ACGGGGCTGGCATGTCACTCATCTCTGGCCTGGATC...AAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR GCA 90 bp CTCTTGCTCACGTCCACAGGCACGAAGGCTGTGTATTTGCTAATGATGTTGCAGCCAGTGCCCAAGCCCTaGGCCCGCTGCCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLLTSTGTKAVYLLMMLQPVPKP*ARCPGS
Trigger: GCTGCCAGGGCAGCGGGCGCAGGGCTTGGGCACTGG...CTGCAACATCATTAGCAAATACACAGCCTTCGTGCCTGTGGACGTGAGCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp AAGGTGTGCTTGTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATTTCTGCACCCAGCACTaGTGGAGGTGCGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: KVCLLAKVMMMLLAERADFCTQH*WRCGPG
Trigger: CCCCGGACCGCACCTCCAGCAGTGCTGGGTGCAGAA...ATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAACAAGCACACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGGGACTCTCCACCCCTaGGAGCAGACATGGCCCACG +
Preference number: 4 (lower is better)
Translates to: HQLQHLPCVVDSAICDHEGTLHP*EQTWPT
Trigger: CGTGGGCCATGTCTGCTCGCAGGGGTGGAGAGTCCC...TTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp GTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGCCGCGGGTGGCCTCGGGCCCTCGGACACAGATaGCAGTCCTTTCACCAGTCT +
Preference number: 4 (lower is better)
Translates to: VLLTAPSVITKRSRGWPRALGHR*QSFHQS
Trigger: AGACTGGTGAAAGGACTGGCATCTGTGTCCGAGGGC...CCGAGGCCACCCGCGGCTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TGCTTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGTTGACCATCTTGGGTTaGAGCCGCTCCCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: CLVVESPLASRAFLACPRLTILG*SRSPSI
Trigger: GATGGAGGGGGAGCGGCTGCAACCCAAGATGGTCAA...CCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGATGGCTCCGGAGGCCAGCTaGAGAGACACCAGAGGTATG +
Preference number: 4 (lower is better)
Translates to: LVVESPLASRAFLACPRMAPEAS*RDTRGM
Trigger: CATACCTCTGGTGTCTCTGCAGCTGGCCTCCGGAGC...CATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp CCCTTGGCTGCTCGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCAACTGTGCTCCAGCCATaGCAGCCCCACCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: PLAARVSSLDLLRFSQDPTVLQP*QPHHRG
Trigger: GCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGT...TGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCGAGCAGCCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGACTGTGCTCCAGCCATaGCAGCCCCACCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: LQHLPCVVDSAICDHEEETVLQP*QPHHRG
Trigger: GCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGT...CTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CATGAGGCTCTTAAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTGGGCAGCGTTaGGAGCTCCGAGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: HEALKGHQHGILDSVHADPAGQR*ELRGGA
Trigger: AGCACCTCCTCGGAGCTCCCAACGCTGCCCAGCGGG...ATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTTAAGAGCCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGCCTGGGCCTGTTGGTTaGAGGTGCCAGTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: HSLHLPARVRHPESGRRQPGPVG*RCQCSW
Trigger: CCAAGAGCACTGGCACCTCCAACCAACAGGCCCAGG...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACCCACGGATCTCCAGCTaGAAGTTGAACTCATACTCC +
Preference number: 4 (lower is better)
Translates to: SDGRVVRDTRWQVKGDVHPRISS*KLNSYS
Trigger: GGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGG...GTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTCGACTCCACAGCCCTGCGAGCAGACATaGCCCACGGATCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ETPEVCSRSSGSRRSTPQPCEQT*PTDLQL
Trigger: CAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGG...CTGTGGAGTCGACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp TCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACAGCATGATGACGGAGTaGTGGGGAATGTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SDGRVVRDTRWQVKGDVHSMMTE*WGMSLW
Trigger: CCACAAAGACATTCCCCACCACTCCGTCATCATGCT...GTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp ACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGTATCTCTTGGCAGCTaGCATGGGGTCACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TRGLGLRRAGGEGHSMAGVSLGS*HGVTCH
Trigger: ATGGCAAGTGACCCCATGCCAGCTGCCAAGAGATAC...ACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp ATTTCGCACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCTCCTGGGACTCGGCTaGGGGGTCCCAGTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: ISHQLQHLPCVVDSAICDLLGLG*GVPVRG
Trigger: TCCTCGGACTGGGACCCCCCAGCCGAGTCCCAGGAG...ATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTGCGAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CAA 72 bp TTCCCGGAGGTCGACTCCACAGCTTTGATCAGTGGCTaGCTCAGGAAGCCCTTGGCTGCTCGCGTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: FPEVDSTALISG*LRKPLAARVSS
Trigger: GCTACTGACGCGAGCAGCCAAGGGCTTCCTGAGCAAGCCACTGATCAAAGCTGTGGAGTCGACCTCCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
3UTR CAA 72 bp TTGGGGTACTCCACCACGGTGGGCAGGTACCGGCTCTaGCTCACGTCCACAGGCACGAAGGCTGTGTATTTG +
Preference number: 4 (lower is better)
Translates to: LGYSTTVGRYRL*LTSTGTKAVYL
Trigger: CAAATACACAGCCTTCGTGCCTGTGGACGTGAGCAAGAGCCGGTACCTGCCCACCGTGGTGGAGTACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp ACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCGACCGGTGGGTGTCCTaGTTTGGAAGGTGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: TNMASLTRCMLIPLMLLLDRWVS*FGRCPR
Trigger: CCGAGGACACCTTCCAAATCAGGACACCCACCGGTC...GAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR GCA 90 bp CCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTCCTCGGTGCACTGGCTaGCTGATGACCCACTTGAGA +
Preference number: 4 (lower is better)
Translates to: PAHAAAPVNEEDELPVGLPRCTG*LMTHLR
Trigger: TCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGG...AAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGAGAGGGGAAAGGATGTTGCCTCGGTGCACTGGCTaGCTGATGACCCACTTGAGA +
Preference number: 4 (lower is better)
Translates to: WPRCTGCLMTHLRGERMLPRCTG*LMTHLR
Trigger: TCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGG...CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGATCAGGAGCTCAGCACTaGCCTCGGACACAGATGCCA +
Preference number: 4 (lower is better)
Translates to: SWHSLHLPARVRHPESGRSGAQH*PRTQMP
Trigger: TGGCATCTGTGTCCGAGGGCAGTGCTGAGCTCCTGA...TCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp ATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTGACCATCTTGGGTTaGAGCCGCTCCCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: IPLMLLLLSMRKMNSPWALTILG*SRSPSI
Trigger: GATGGAGGGGGAGCGGCTGCAACCCAAGATGGTCAA...GGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp AGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGTGGCATGGGGTCACTTaGCATGGTGGCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RATNMASLTRCMLIPLMLWHGVT*HGGSWE
Trigger: CTCCCAAGAGCCACCATGGCAAGTGACCCCATGCCA...CAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGAGAGGGGAAAGGATGTTGTGGTTGGTGAGGTCCTaGAGCCTGGCTTTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: WPRCTGCLMTHLRGERMLWLVRS*SLAFRS
Trigger: ACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCA...CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTGCTGTCACAGGACGGGTaGCTAGGCGGGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EVGTEVEHDDGVVGNVFVLSQDG*LGGELV
Trigger: CACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAG...CACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp GAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTGGCCTTGAGTGTGCCCTaGGTGCGGCCCTCGGGTACT +
Preference number: 4 (lower is better)
Translates to: EVGTEVEHDDGVVGNVFVALSVP*VRPSGT
Trigger: AGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGC...CACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGCTCAATTTCCCCACCTaGGAGCAGACATGGCCCACG +
Preference number: 4 (lower is better)
Translates to: HSLHLPARVRHPESGRRQLNFPT*EQTWPT
Trigger: CGTGGGCCATGTCTGCTCGCAGGTGGGGAAATTGAG...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp CTGAGCCAAGGTGGGCCCCTAAACTCTCTCCTCCCCCAGGTCTGCTATAAAGTCTACACGAAGAGGCCCTaGAAGGGCTGGGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSQGGPLNSLLPQVCYKVYTKRP*KGWASR
Trigger: CCTGGAAGCCCAGCCCTTCCAGGGCCTCTTCGTGTA...GACTTTATAGCAGACCTGGGGGAGGAGAGAGTTTAGGGGCCCACCTTGGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp CCTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGATGGGAGGCATCGAAGTaGCCGCTCTCCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PESAACCTGASCQIWDWRWEASK*PLSSLA
Trigger: AGCCAAGCTGGAGAGCGGCCACTTCGATGCCTCCCA...TCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTGAGGGGAAAGGATGTTaGTCCCACCCATGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PAHAAAPVNEEDELPVGLEGKGC*SHPCRP
Trigger: AGGCCGACATGGGTGGGACCAACATCCTTTCCCCTC...AAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TCAGCAAGGGCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCTGGTGTGGCCTCGGTGCACTaGCTGCCTGATGACCCACTT +
Preference number: 4 (lower is better)
Translates to: SARAANQSATAGHPGWSGVASVH*LPDDPL
Trigger: AAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCAC...ACCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCCCTTGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATGGGGCGGCGTCAGCTATAGCACCTGGTaGAGAAGGCGTGATTTCGCA +
Preference number: 4 (lower is better)
Translates to: VGQGDDDALGRAGRWGGVSYSTW*RRRDFA
Trigger: TGCGAAATCACGCCTTCTCCACCAGGTGCTATAGCT...GACGCCGCCCCATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGCCTGGCTTTCCGCAGTaGGTATCTCTTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HSLHLPARVRHPESGRRQPGFPQ*VSLGSW
Trigger: CCAGCTGCCAAGAGATACCCACTGCGGAAAGCCAGG...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGATGCCTGGCTTTCCGCAGTaGGTATCTCTTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVVESPLASRAFLACPRMPGFPQ*VSLGSW
Trigger: CCAGCTGCCAAGAGATACCCACTGCGGAAAGCCAGG...CATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGGTACTCCACCACGGTaGGCAGGTACCGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HQLQHLPCVVDSAICDHEGTPPR*AGTGSC
Trigger: GCAAGAGCCGGTACCTGCCCACCGTGGTGGAGTACC...TTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CGGACACAGATGCCAGTCCTTTCACCAGTCTGTGGCAGACGTTGGGTCCAATTCGTAGCCAGGCTGCGCTaGGGACCTTCAGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: RTQMPVLSPVCGRRWVQFVARLR*GPSEAP
Trigger: CGGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTAC...GAATTGGACCCAACGTCTGCCACAGACTGGTGAAAGGACTGGCATCTGTGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp TGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGGGTTTTGGAGGCCAATaGGACCAAGAAGTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CRRSTNSWRAAALSVPCVGFGGQ*DQEVER
Trigger: TCTCTCAACTTCTTGGTCCCATTGGCCTCCAAAACC...CACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CCA 90 bp GTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACAGCAATTTCCTGAAGACTaGAAGTTCAGCTTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VGGRTVLQPCQPHHRGPQQFPED*KFSLAQ
Trigger: CTGAGCCAAGCTGAACTTCCAGTCTTCAGGAAATTG...CTGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CCA 90 bp TGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGAGAGGGGAAAGGATGTTGCTCTCCACCCCTGAGTaGCATAGAAAGGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: WPRCTGCLMTHLRGERMLLSTPE*HRKARG
Trigger: CCCCCTTGCCTTTCTATGCCACTCAGGGGTGGAGAG...CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp GTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATGGGGCGGCGTCTGTCATGATTGGGGATaGTGTTATTCCCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VGQGDDDALGRAGRWGGVCHDWG*CYSQEA
Trigger: GGCCTCCTGGGAATAACACCATCCCCAATCATGACA...GACGCCGCCCCATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp ATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTTCTCAGGCTGGTGGAGAAGGCGTaGTTTCGCACCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MLLLLSMRKMNSPWAFLRLVEKA*FRTSSS
Trigger: GCTGGAGCTGGTGCGAAATCACGCCTTCTCCACCAG...CCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp GAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTCGACTCCACAGTATGCCCTCCGTCGCTaGGAGAGGTTCAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: ETPEVCSRSSGSRRSTPQYALRR*ERFRSC
Trigger: GCACGATCTGAACCTCTCTCAGCGACGGAGGGCATA...CTGTGGAGTCGACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp AAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTTATGCCCTCCGTCGCTaGGAGAGGTTCAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: KGHQHGILDSVHADPAHAYALRR*ERFRSC
Trigger: GCACGATCTGAACCTCTCTCAGCGACGGAGGGCATA...AGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp AGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGTCGACTCCACAGCTTTaGTCAGTGGCTTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RFSSQCRRSTNSWRAAALSTPQL*SVACSG
Trigger: TCCTGAGCAAGCCACTGATCAAAGCTGTGGAGTCGA...CAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGAGAGGGGAAAGGATGTTGTCACCTTTCCCGGTGTaGAGGAATGAGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: WPRCTGCLMTHLRGERMLSPFPV*RNEGLW
Trigger: CCATAGCCCCTCATTCCTGCACACCGGGAAAGGTGA...CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR GCA 90 bp CTGCCCTCGGACACAGATGCCAGTCCTTTCACCAGTCTGTGGCAGACGTTGGGTGCATCCTTGACTCGGTaGATGCTGATCCCGCTCATG +
Preference number: 4 (lower is better)
Translates to: LPSDTDASPFTSLWQTLGASLTR*MLIPLM
Trigger: CATGAGCGGGATCAGCATGCACCGAGTCAAGGATGC...ACCCAACGTCTGCCACAGACTGGTGAAAGGACTGGCATCTGTGTCCGAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CCTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGATGGCATGGGGTCACTTaGCATGGTGGCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PESAACCTGASCQIWDWRWHGVT*HGGSWE
Trigger: CTCCCAAGAGCCACCATGGCAAGTGACCCCATGCCA...TCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTCGACTCCACAGTGGTTGGTGAGGTCCTaGAGCCTGGCTTTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: ETPEVCSRSSGSRRSTPQWLVRS*SLAFRS
Trigger: ACTGCGGAAAGCCAGGCTGCAGGACCTCACCAACCA...CTGTGGAGTCGACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GAGCAGGAAGGCTCCGGAGGCCAGCTGCAGAGACACCAGAGGTATGTAGTCGAAGGCTGCAAATCAATCTaGCACCGCTGGACATCCAGG +
Preference number: 4 (lower is better)
Translates to: EQEGSGGQLQRHQRYVVEGCKSI*HRWTSR
Trigger: CCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCC...TTCGACTACATACCTCTGGTGTCTCTGCAGCTGGCCTCCGGAGCCTTCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GAAGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACATGTCATTTCCTGGTaGCGAATCTTCTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: EVGGRTVLQPCQPHHRGPHVISW*RIFSKH
Trigger: ATGCTTGGAGAAGATTCGGCACCAGGAAATGACATG...TGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp TGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGAGAGGGGAAAGGATGTTGGCCTGCAAATCAATCTaGCACCGCTGGACATCCAGG +
Preference number: 4 (lower is better)
Translates to: WPRCTGCLMTHLRGERMLACKSI*HRWTSR
Trigger: CCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGGC...CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp ATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTTCTCAGGAGCCGGGCATCCCGCTaGCTACTCAGCCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: MLLLLSMRKMNSPWAFLRSRASR*LLSLQN
Trigger: GTTCTGAAGGCTGAGTAGCCAGCGGGATGCCCGGCT...CCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAATGGGAGGCATCGAAGTaGCCGCTCTCCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HQLQHLPCVVDSAICDHEWEASK*PLSSLA
Trigger: AGCCAAGCTGGAGAGCGGCCACTTCGATGCCTCCCA...TTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAATCTCCATGGGGGCAATaGTCCCCAGGTTGGCCACGA +
Preference number: 4 (lower is better)
Translates to: HQLQHLPCVVDSAICDHESPWGQ*SPGWPR
Trigger: TCGTGGCCAACCTGGGGACCATTGCCCCCATGGAGA...TTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAATTGCCCTGGGCCTGTTaGTTGGAGGTGCCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: HQLQHLPCVVDSAICDHELPWAC*LEVPVL
Trigger: GAGCACTGGCACCTCCAACCAACAGGCCCAGGGCAA...TTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CTGTTCAGCAAGGGCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCGAGGGGAAAGGATGTTaGTCCCACCCATGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LFSKGCKSICHRWTSRLVEGKGC*SHPCRP
Trigger: AGGCCGACATGGGTGGGACCAACATCCTTTCCCCTC...GACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCCCTTGCTGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp ACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGGTGGCCTCGGTGCACTaGCTGCCTGATGACCCACTT +
Preference number: 4 (lower is better)
Translates to: TRCMLIPLMLLLLSMRKMVASVH*LPDDPL
Trigger: AAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCAC...CATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGATGCCATGGTGGCTCTTaGGAGGGGCTTGTGATTGGT +
Preference number: 4 (lower is better)
Translates to: SWHSLHLPARVRHPESGRCHGGS*EGLVIG
Trigger: ACCAATCACAAGCCCCTCCCAAGAGCCACCATGGCA...TCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp AAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGGTCACTTGCCATGGTaGCTCTTGGGAGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: KGHQHGILDSVHADPAHAGHLPW*LLGGAC
Trigger: ACAAGCCCCTCCCAAGAGCCACCATGGCAAGTGACC...AGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp AAGGCAGATGAAGGCCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTTGGGGTCACTTGCCATaGTGGCTCTTGGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KADEGLQINLPPLDIQAGWGHLP*WLLGGA
Trigger: AGCCCCTCCCAAGAGCCACCATGGCAAGTGACCCCA...ACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGGCCTTCATCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp ACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGTGGGGTCACTTGCCATaGTGGCTCTTGGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TRCMLIPLMLLLLSMRKMWGHLP*WLLGGA
Trigger: AGCCCCTCCCAAGAGCCACCATGGCAAGTGACCCCA...CATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CCTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGAAAGGCAGAGGGATGGTaGGACGGCTCCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: PESAACCTGASCQIWDWRKAEGW*DGSRSP
Trigger: TGGAGATCTGGAGCCGTCCCACCATCCCTCTGCCTT...TCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GGCCAGCTGCAGAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTTGTTGCAGGCCTTGCTaGTGTGCAAGGCGCTCACTT +
Preference number: 4 (lower is better)
Translates to: GQLQRHQRYVVEALVPGGCCRPC*CARRSL
Trigger: AAGTGAGCGCCTTGCACACCAGCAAGGCCTGCAACA...ACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTCTGCAGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CTGGCCTCGCTGAAGAGAGCAGTGGGACTTGCCTCCATGTCATTTCCTGGTGCCTGTTGCAGGCCTTGCTaGTGTGCAAGGCGCTCACTT +
Preference number: 4 (lower is better)
Translates to: LASLKRAVGLASMSFPGACCRPC*CARRSL
Trigger: AAGTGAGCGCCTTGCACACCAGCAAGGCCTGCAACA...GGCACCAGGAAATGACATGGAGGCAAGTCCCACTGCTCTCTTCAGCGAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGACCTTCAGAAGCACCGGTACTCCACCACGGTaGGCAGGTACCGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HGRKSICSQAALGTFRSTGTPPR*AGTGSC
Trigger: GCAAGAGCCGGTACCTGCCCACCGTGGTGGAGTACC...GGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TTCTCTGAGGCCTTCATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGAGGCCCAGCTTGCCCTTaGCCAGAGGCTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: FSEAFMEERVFVARLRWGGPACP*PEAPGR
Trigger: TCTCCCTGGAGCCTCTGGCCAAGGGCAAGCTGGGCC...TCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATGAAGGCCTCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACATCGCTCAGGACTGGGGCCATGGCCTTCTTCAAGGATTTGACCATCTTGGGGAGAGAGGAGTTCGCTaGGGCACACCGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: HIAQDWGHGLLQGFDHLGERGVR*GTPRSR
Trigger: CCTGGATCTCGGTGTGCCCCAGCGAACTCCTCTCTC...CCCAAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp TTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGATGGAGGCTGAGAAACCCTaGCCTAGCTGTGGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: LVVESPLASRAFLACPRMEAEKP*PSCGSL
Trigger: TAGAGAGCCACAGCTAGGCCAGGGTTTCTCAGCCTC...CATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp CCCACCCATGTCGGCCTTCATTCTCTGGATGTCATCACAAGCCATGGCCAAGCTCGACACGGTCGGCAATaGCTGCCTCAAAGCCGATCA +
Preference number: 4 (lower is better)
Translates to: PTHVGLHSLDVITSHGQARHGRQ*LPQSRS
Trigger: TGATCGGCTTTGAGGCAGTCATTGCCGACCGTGTCG...AGCTTGGCCATGGCTTGTGATGACATCCAGAGAATGAAGGCCGACATGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGAGCTGCCAGACTCCTaGGAGTGCAGCATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: HADPAHAAAPVNEEDELPELPDS*ECSMLY
Trigger: GTACAGCATGCTGCACTCTCAGGAGTCTGGCAGCTC...GGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp AGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACATATAGCAGAGCATATTaGACTCGAGATTCTCATCCC +
Preference number: 4 (lower is better)
Translates to: SRRPNCAPAMPAPPPWPTYSRAY*TRDSHP
Trigger: GGGATGAGAATCTCGAGTTCAATATGCTCTGCTATA...TGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp GGTGCCCCCGAGTTCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTATAGCAGAGCATATTaGACTCGAGATTCTCATCCC +
Preference number: 4 (lower is better)
Translates to: GAPEFLAQSPPSSPGPSSYSRAY*TRDSHP
Trigger: GGGATGAGAATCTCGAGTTCAATATGCTCTGCTATA...GGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGAACTCGGGGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp ATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTTCTCAGGCCTGAGAGTGCAGCATaGTGTACCGGCGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: MLLLLSMRKMNSPWAFLRPESAA*CTGASC
Trigger: ACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGG...CCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGACCTTCAGAAGCACCAAGCTCACCTCCCACTaGAGGCGTTGGCTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: HGRKSICSQAALGTFRSTKLTSH*RRWLSC
Trigger: GCACGACAGCCAACGCCTGCAGTGGGAGGTGAGCTT...GGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp ATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTTCTCAGGCCCTCGGGTACTTCCTaGTGCTCCAGCCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: MLLLLSMRKMNSPWAFLRPSGTS*CSSHEL
Trigger: CAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGG...CCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp CGAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTAGGACCATTTCCTGGTaGCGAATCTTCTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: RDSHPSAAEAQTAGGQRPRTISW*RIFSKH
Trigger: ATGCTTGGAGAAGATTCGGCACCAGGAAATGGTCCT...AGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CCA 90 bp ACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGCGCTGCCCTGGCAGCTaGCTTGATCAATGCCCACAT +
Preference number: 4 (lower is better)
Translates to: TRCMLIPLMLLLLSMRKMRCPGS*LDQCPH
Trigger: ATGTGGGCATTGATCAAGCCAGCTGCCAGGGCAGCG...CATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp ACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGGTTGGGGATCGAACATaGGAGGCATCGAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TRCMLIPLMLLLLSMRKMVGDRT*EASKWP
Trigger: CGGCCACTTCGATGCCTCCCATGTTCGATCCCCAAC...CATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGATCAATGGTCCCCAGGTTaGCCACGAACAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: LRVQHAVPAPLVRSGIGDQWSPG*PRTGSA
Trigger: AGCGGATCCTGTTCGTGGCCAACCTGGGGACCATTG...ATCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGACCTTCAGAAGCACCGTGCTTCCAATGGTCCCCAGGTTaGCCACGAACAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: ERVFVARLRWGPSEAPCFQWSPG*PRTGSA
Trigger: AGCGGATCCTGTTCGTGGCCAACCTGGGGACCATTG...GAAGCACGGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTACAAATACTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp ATTTCGCACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATAGGTGCCAGTGCTCTTaGTGCAGAACTGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: ISHQLQHLPCVVDSAICDRCQCS*CRTGAR
Trigger: CCGTGCCCCAGTTCTGCACCAAGAGCACTGGCACCT...ATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTGCGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCAGGGAATGGGGCTCGCTGGGGTaGATGAGGATCTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: VQRSITYNAIPHQPFSREWGSLG*MRISTG
Trigger: GCCTGTGGAGATCCTCATCCACCCCAGCGAGCCCCA...TTCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGCCTTGGCAGTGGGGAATGTCTTTGTaGAGGCGTTTTCGAATGATT +
Preference number: 4 (lower is better)
Translates to: ACGPRVLPAAPAMSWPWQWGMSL*RRFRMI
Trigger: AATCATTCGAAAACGCCTCCACAAAGACATTCCCCA...CTGCCAAGGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CACATCGCTCAGGACTGGGGCCATGGCCTTCTTCAAGGATTTGACCATCTTGGGCACGGCTGGACTGACTaGAGGTCGGGACAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: HIAQDWGHGLLQGFDHLGHGWTD*RSGQKL
Trigger: CAACTTCTGTCCCGACCTCCAGTCAGTCCAGCCGTG...CCCAAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAATCTTGGCAGCTGGCATaGGGTCACTTGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: HQLQHLPCVVDSAICDHESWQLA*GHLPWW
Trigger: CCACCATGGCAAGTGACCCCATGCCAGCTGCCAAGA...TTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CCCTTGGCTGCTCGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCATCTTGGCAGCTGGCATaGGGTCACTTGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PLAARVSSLDLLRFSQDPSWQLA*GHLPWW
Trigger: CCACCATGGCAAGTGACCCCATGCCAGCTGCCAAGA...TGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCGAGCAGCCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CTGCCCTCGGACACAGATGCCAGTCCTTTCACCAGTCTGTGGCAGACGTTGGGTGTATCTCTTGGCAGCTaGCATGGGGTCACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LPSDTDASPFTSLWQTLGVSLGS*HGVTCH
Trigger: ATGGCAAGTGACCCCATGCCAGCTGCCAAGAGATAC...ACCCAACGTCTGCCACAGACTGGTGAAAGGACTGGCATCTGTGTCCGAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACAGGCCGGTCAAAGGTGTGCTTGTTGGCCAAGGTGATGATGATGCTCTTGGCGCAGTGGGTATCTCTTaGCAGCTGGCATGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: HRPVKGVLVGQGDDDALGAVGIS*QLAWGH
Trigger: GTGACCCCATGCCAGCTGCCAAGAGATACCCACTGC...GCCAAGAGCATCATCATCACCTTGGCCAACAAGCACACCTTTGACCGGCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACATCGCTCAGGACTGGGGCCATGGCCTTCTTCAAGGATTTGACCATCTTGGGACATCCAGGCTGGTCTaGTTGGTGAGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HIAQDWGHGLLQGFDHLGTSRLV*LVRSCS
Trigger: GCTGCAGGACCTCACCAACCAGACCAGCCTGGATGT...CCCAAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAATCAATCTGCCACCGCTaGACATCCAGGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HQLQHLPCVVDSAICDHESICHR*TSRLVW
Trigger: CCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGA...TTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CATGAGGCTCTTAAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATTCCCACTGCAGGCGTTaGCTGTCGTGCAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: HEALKGHQHGILDSVHADSHCRR*LSCRPL
Trigger: CAAAGGCCTGCACGACAGCCAACGCCTGCAGTGGGA...ATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTTAAGAGCCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACGTGCCCCTCCACTGTTaGGCCAGGGCCCGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: VIAEHIELEILIPVPQKHVPLHC*ARAREP
Trigger: TGGCTCTCGGGCCCTGGCCCAACAGTGGAGGGGCAC...GTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTCACAGCTTTGATCAGTaGCTTGCTCAGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: EILIPVPQKHKQLAGSGLHSFDQ*LAQEAL
Trigger: AAGGGCTTCCTGAGCAAGCCACTGATCAAAGCTGTG...AAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TTCTCTGAGGCCTTCATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGAGAGCTGGTGCACAGCTaGGGACTCGGGGTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: FSEAFMEERVFVARLRWGELVHS*GLGVLD
Trigger: GTCCAAGACCCCGAGTCCCCAGCTGTGCACCAGCTC...TCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATGAAGGCCTCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGAGAAGCACAAACAGCTaGCGGGCAGCGGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LQHLPCVVDSAICDHEEERSTNS*RAAALS
Trigger: ACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCT...CTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp AAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGTCACCTGTGACTGTTaGGGATCGAACATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KGHQHGILDSVHADPAHAVTCDC*GSNMGG
Trigger: GCCTCCCATGTTCGATCCCCAACAGTCACAGGTGAC...AGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CAA 72 bp ACTGAGGCCCAGACGGGGGCAGGCACTGGCCTAAAGTaGCATGGCTGGATGGTAGCAAAGTTGGGATTGAAC +
Preference number: 4 (lower is better)
Translates to: TEAQTGAGTGLK*HGWMVAKLGLN
Trigger: GTTCAATCCCAACTTTGCTACCATCCAGCCATGCAACTTTAGGCCAGTGCCTGCCCCCGTCTGGGCCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR CAA 72 bp GCGAGCAGACATGGCCCACGGATCTCCAGCTGGAAGTaGAACTCATACTCCATGGGGTTGGACACTTCGGTG +
Preference number: 4 (lower is better)
Translates to: ASRHGPRISSWK*NSYSMGLDTSV
Trigger: CACCGAAGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGGGCCATGTCTGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp AGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGTCTCCAGCTGGAAGTTaGACTCATACTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: RATNMASLTRCMLIPLMLSPAGS*THTPWG
Trigger: ACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGA...CAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CCCTTGGCTGCTCGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCACCAACTCCCACTCAGTaGAGTAGGAGGCCGAACTGT +
Preference number: 4 (lower is better)
Translates to: PLAARVSSLDLLRFSQDPPTPTQ*SRRPNC
Trigger: ACAGTTCGGCCTCCTACTTCACTGAGTGGGAGTTGG...TGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCGAGCAGCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp GCAGGTGAAGGGGGACGTCCACTTGAGCTTCTCCATGGGGATGTGCGTGGCCTCACCCATCAATGTCTGTaGGCACTTTCTAGGACCATT +
Preference number: 4 (lower is better)
Translates to: AGEGGRPLELLHGDVRGLTHQCL*ALSRTI
Trigger: AATGGTCCTAGAAAGTGCTCACAGACATTGATGGGT...GAGGCCACGCACATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCTTCACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR GCA 90 bp ACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGGGCCGGTCAAAGGTGTaGTTGTTGGCCAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: TRCMLIPLMLLLLSMRKMGRSKV*LLAKVM
Trigger: CATCACCTTGGCCAACAAGCACACCTTTGACCGGCC...CATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CACATCGCTCAGGACTGGGGCCATGGCCTTCTTCAAGGATTTGACCATCTTGGGGCATCCTTGACTCGGTaGATGCTGATCCCGCTCATG +
Preference number: 4 (lower is better)
Translates to: HIAQDWGHGLLQGFDHLGASLTR*MLIPLM
Trigger: CATGAGCGGGATCAGCATGCACCGAGTCAAGGATGC...CCCAAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CCCTTGGCTGCTCGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCAGCCCTCGGACACAGATaGCAGTCCTTTCACCAGTCT +
Preference number: 4 (lower is better)
Translates to: PLAARVSSLDLLRFSQDPALGHR*QSFHQS
Trigger: AGACTGGTGAAAGGACTGGCATCTGTGTCCGAGGGC...TGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCGAGCAGCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp GTACCGGCTCTTGCTCACGTCCACAGGCACGAAGGCTGTGTATTTGCTAATGATAAGCTCACCTCCCACTaGAGGCGTTGGCTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: VPALAHVHRHEGCVFANDKLTSH*RRWLSC
Trigger: GCACGACAGCCAACGCCTGCAGTGGGAGGTGAGCTT...ATCATTAGCAAATACACAGCCTTCGTGCCTGTGGACGTGAGCAAGAGCCGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp CATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGACCTTCAGAAGCACCTCGGGTACTTCCTGCTaGTCCAGCCATGAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: HGRKSICSQAALGTFRSTSGTSC*SSHELA
Trigger: GGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGA...GGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TCGATGGCAGGTGAAGGGGGACGTCCACTTGAGCTTCTCCATGGGGATGTGCGTGAGAGCAGTGGGACTTaGCTCCATGTCAGCAATTTC +
Preference number: 4 (lower is better)
Translates to: SMAGEGGRPLELLHGDVRESSGT*LHVSNF
Trigger: GAAATTGCTGACATGGAGGCAAGTCCCACTGCTCTC...ACGCACATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCTTCACCTGCCATCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CCA 90 bp CTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGAGCTGCCAGACTGAAGCAACACGTGTCTaGGTACACACTCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LPARVRHPESGRRQSCQTEATRV*VHTLSL
Trigger: GAGAGACAGAGTGTGTACCCAGACACGTGTTGCTTC...AGTCTGGCAGCTCTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGGACATGGGGGTTCCCTGTGACTGTTaGGGATCGAACATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VLVKLSQGHVPFLYQDMGVPCDC*GSNMGG
Trigger: GCCTCCCATGTTCGATCCCCAACAGTCACAGGGAAC...CCCCATGTCCTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp TGGCCTCGGTGCACTGGCTGCCTGATGACCCACTTGAGAGGGGAAAGGATGTTGAGGAATGAGGGGCTATaGAAACCCCGTCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: WPRCTGCLMTHLRGERMLRNEGL*KPRLAE
Trigger: TTCTGCAAGACGGGGTTTCCATAGCCCCTCATTCCT...CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCAGCCAGTGCACCGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp GTACCGGCTCTTGCTCACGTCCACAGGCACGAAGGCTGTGTATTTGCTAATGATTCTCCATGGGGGCAATaGTCCCCAGGTTGGCCACGA +
Preference number: 4 (lower is better)
Translates to: VPALAHVHRHEGCVFANDSPWGQ*SPGWPR
Trigger: TCGTGGCCAACCTGGGGACCATTGCCCCCATGGAGA...ATCATTAGCAAATACACAGCCTTCGTGCCTGTGGACGTGAGCAAGAGCCGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CTGAGCCAAGGTGGGCCCCTAAACTCTCTCCTCCCCCAGGTCTGCTATAAAGTCTTCTCTATCAGGACATaGGGCATATGGGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LSQGGPLNSLLPQVCYKVFSIRT*GIWGSL
Trigger: CAGCGAGCCCCATATGCCCCATGTCCTGATAGAGAA...GACTTTATAGCAGACCTGGGGGAGGAGAGAGTTTAGGGGCCCACCTTGGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp GAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTGCACGGCTGGACTGACTaGAGGTCGGGACAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: EVGTEVEHDDGVVGNVFVHGWTD*RSGQKL
Trigger: CAACTTCTGTCCCGACCTCCAGTCAGTCCAGCCGTG...CACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GAGCAGGAAGGCTCCGGAGGCCAGCTGCAGAGACACCAGAGGTATGTAGTCGAAAGCTATAGCACCTGGTaGAGAAGGCGTGATTTCGCA +
Preference number: 4 (lower is better)
Translates to: EQEGSGGQLQRHQRYVVESYSTW*RRRDFA
Trigger: TGCGAAATCACGCCTTCTCCACCAGGTGCTATAGCT...TTCGACTACATACCTCTGGTGTCTCTGCAGCTGGCCTCCGGAGCCTTCCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp AAGGTGTGCTTGTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATCACATCGCTCAGGACTaGGGCCATGGCCTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KVCLLAKVMMMLLAERADHIAQD*GHGLLQ
Trigger: TTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG...ATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAACAAGCACACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCAGGGAACCTGCGAGCAGACATaGCCCACGGATCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CAKKHHIQCHTPPAVLQGTCEQT*PTDLQL
Trigger: CAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGT...TCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR CAA 72 bp TGGATGAGGATCTCCACAGGCCGGTCAAAGGTGTGCTaGTTGGCCAAGGTGATGATGATGCTCTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: WMRISTGRSKVC*LAKVMMMLLAE
Trigger: CTCGGCCAAGAGCATCATCATCACCTTGGCCAACAAGCACACCTTTGACCGGCCTGTGGAGATCCTCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp TGCTTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGTCCAAAGAGATTCTCTaGGGCCTTCATGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: CLVVESPLASRAFLACPRSKEIL*GLHGRK
Trigger: CTTTCTTCCATGAAGGCCTCAGAGAATCTCTTTGGA...CCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp CTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGTCGACTCCACAGCTTTaGTCAGTGGCTTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LQHLPCVVDSAICDHEEESTPQL*SVACSG
Trigger: TCCTGAGCAAGCCACTGATCAAAGCTGTGGAGTCGA...CTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp CCTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGATGGAAGGCTGAGGCATaGGAATTGCTTGAACCTAGG +
Preference number: 4 (lower is better)
Translates to: PESAACCTGASCQIWDWRWKAEA*ELLEPR
Trigger: CCTAGGTTCAAGCAATTCTCATGCCTCAGCCTTCCA...TCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR GCA 90 bp TCCCTTCAAGTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGAGCCGATCACCGTGGTaGACTCATCCAGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: SLQVLVKLSQGHVPFLYQSRSPW*THPGGT
Trigger: TGTACCCCCTGGATGAGTGCACCACGGTGATCGGCT...CTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCACTTGAAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTGACGGTCGGCAATGACTaGCTCAAAGCCGATCACCGT +
Preference number: 4 (lower is better)
Translates to: EVGTEVEHDDGVVGNVFVTVGND*LKADHR
Trigger: ACGGTGATCGGCTTTGAGGCAGTCATTGCCGACCGT...CACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCAAAGAGATTCTCTAGGCGTTGGCTGTCGTaGAGGCCTTTGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RVSSLDLLRFSQDPKRFSRRWLS*RPLTRA
Trigger: GGCCCTGGTCAAAGGCCTGCACGACAGCCAACGCCT...AGAGAATCTCTTTGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TTAGCCAGGATCCAAAGAGATTCTCTGAGGCCTTCATGGAAGAAAGAGTATTTGCATAGGTCGGCATCCTaGGCGCCGCCCCGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LARIQRDSLRPSWKKEYLHRSAS*APPRSG
Trigger: ACCGGAGCGGGGCGGCGCGCAGGATGCCGACCTATG...CAAATACTCTTTCTTCCATGAAGGCCTCAGAGAATCTCTTTGGATCCTGGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCTCTCCAAGCATCGTCTaGGGCCTTCCAAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: HADPAHAAAPVNEEDELPSPSIV*GLPKPE
Trigger: TTCTGGCTTTGGAAGGCCGCAGACGATGCTTGGAGA...GGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp TGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCAGGGACAAAGCCGATCACCGTaGTGCACTCATCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: CAKKHHIQCHTPPAVLQGQSRSP*CTHPGG
Trigger: ACCCCCTGGATGAGTGCACCACGGTGATCGGCTTTG...TCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TCCCTTCAAGTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGGTTGGGGATCGAACATaGGAGGCATCGAAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SLQVLVKLSQGHVPFLYQVGDRT*EASKWP
Trigger: CGGCCACTTCGATGCCTCCCATGTTCGATCCCCAAC...CTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCACTTGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp AAGGTGTGCTTGTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATTTCTCTATCAGGACATaGGGCATATGGGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: KVCLLAKVMMMLLAERADFSIRT*GIWGSL
Trigger: CAGCGAGCCCCATATGCCCCATGTCCTGATAGAGAA...ATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAACAAGCACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp AAGGCAGATGAAGGCCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCTTCCCTTCAAGTGCTaGTCAAACTCTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KADEGLQINLPPLDIQAGLPFKC*SNSPRV
Trigger: GACCCTGGGAGAGTTTGACCAGCACTTGAAGGGAAG...ACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGGCCTTCATCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp AAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTTGTCATCACAAGCCATaGCCAAGCTGTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: KGHQHGILDSVHADPAHACHHKP*PSCPHC
Trigger: ACAGTGAGGACAGCTTGGCCATGGCTTGTGATGACA...AGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp AGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGTCGGCCTTCATTCTCTaGATGTCATCACAAGCCATG +
Preference number: 4 (lower is better)
Translates to: RATNMASLTRCMLIPLMLSAFIL*MSSQAM
Trigger: CATGGCTTGTGATGACATCCAGAGAATGAAGGCCGA...CAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GAGCAGGAAGGCTCCGGAGGCCAGCTGCAGAGACACCAGAGGTATGTAGTCGAATCGGCCTTCATTCTCTaGATGTCATCACAAGCCATG +
Preference number: 4 (lower is better)
Translates to: EQEGSGGQLQRHQRYVVESAFIL*MSSQAM
Trigger: CATGGCTTGTGATGACATCCAGAGAATGAAGGCCGA...TTCGACTACATACCTCTGGTGTCTCTGCAGCTGGCCTCCGGAGCCTTCCTGCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp TCATTTCCTGGTGCCGAATCTTCTCCAAGCATCGTCTGCGGCCTTCCAAAGCCACACATCGCTCAGGACTaGGGCCATGGCCTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SFPGAESSPSIVCGLPKPHIAQD*GHGLLQ
Trigger: TTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG...TGGCTTTGGAAGGCCGCAGACGATGCTTGGAGAAGATTCGGCACCAGGAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp TCCCTTCAAGTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGACATCCAGGCTGGTCTaGTTGGTGAGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLQVLVKLSQGHVPFLYQTSRLV*LVRSCS
Trigger: GCTGCAGGACCTCACCAACCAGACCAGCCTGGATGT...CTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCACTTGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCAAAGAGATTCTCTCTTGGTAGCGGCGGTTaGACCCCTGCTCGATCTCGC +
Preference number: 4 (lower is better)
Translates to: RVSSLDLLRFSQDPKRFSLGSGG*TPARSR
Trigger: GCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAAG...AGAGAATCTCTTTGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp AAGGTGTGCTTGTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATATGTTCCTTGCCAACTaGGCAGTGTGTGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: KVCLLAKVMMMLLAERADMFLAN*AVCVQG
Trigger: TCCCTGCACACACACTGCCCAGTTGGCAAGGAACAT...ATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAACAAGCACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR CAA 72 bp ACTGGCCTAAAGTTGCATGGCTGGATGGTAGCAAAGTaGGGATTGAACTCAGGCCTCCTGGCTGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TGLKLHGWMVAK*GLNSGLLAASP
Trigger: TGGACTGGCAGCCAGGAGGCCTGAGTTCAATCCCAACTTTGCTACCATCCAGCCATGCAACTTTAGGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR CAA 72 bp TGGGTTCTCTCATCTGCCCTTTTATTTGAGTGGGCATaGCTGTGTCCACTCCGTGCCCACGTGGTCTACCTC +
Preference number: 4 (lower is better)
Translates to: WVLSSALLFEWA*LCPLRAHVVYL
Trigger: GAGGTAGACCACGTGGGCACGGAGTGGACACAGCAATGCCCACTCAAATAAAAGGGCAGATGAGAGAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR CAA 72 bp CCATGGAGACAAGAGCCTGTCCTACAGGCACCAGACTaGCTAGTCTCTATGTGCCTATGCAAGCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: PWRQEPVLQAPD*LVSMCLCKPVG
Trigger: GCCTACAGGCTTGCATAGGCACATAGAGACTAGCAAGTCTGGTGCCTGTAGGACAGGCTCTTGTCTCCATGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.12
3UTR CAA 72 bp ATCTCCAGCTGGAAGTTGAACTCATACTCCATGGGGTaGGACACTTCGGTGTTCAGGAGAGTCGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: ISSWKLNSYSMG*DTSVFRRVARH
Trigger: GTGCCTGGCGACTCTCCTGAACACCGAAGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CAA 72 bp TCCACAGGCACGAAGGCTGTGTATTTGCTAATGATGTaGCAGGCCTTGCTGGTGTGCAAGGCGCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: STGTKAVYLLMM*QALLVCKALTW
Trigger: CCAAGTGAGCGCCTTGCACACCAGCAAGGCCTGCAACATCATTAGCAAATACACAGCCTTCGTGCCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp GTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACCCAGGTTGCCATAGGTaGGGGAGGCAGTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VIAEHIELEILIPVPQKHPGCHR*GRQLGP
Trigger: TGGGCCTAACTGCCTCCCTCACCTATGGCAACCTGG...GTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCGACACGGTCGGCAATaGCTGCCTCAAAGCCGATCA +
Preference number: 4 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLRHGRQ*LPQSRS
Trigger: TGATCGGCTTTGAGGCAGTCATTGCCGACCGTGTCG...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CACATCGCTCAGGACTGGGGCCATGGCCTTCTTCAAGGATTTGACCATCTTGGGGCTTGGCTTTGTCCTTaGTCTGTACTGTCACGACAC +
Preference number: 4 (lower is better)
Translates to: HIAQDWGHGLLQGFDHLGAWLCP*SVLSRH
Trigger: GTGTCGTGACAGTACAGATCAAGGACAAAGCCAAGC...CCCAAGATGGTCAAATCCTTGAAGAAGGCCATGGCCCCAGTCCTGAGCGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CCCACCCATGTCGGCCTTCATTCTCTGGATGTCATCACAAGCCATGGCCAAGCTGCTTGGCTTTGTCCTTaGTCTGTACTGTCACGACAC +
Preference number: 4 (lower is better)
Translates to: PTHVGLHSLDVITSHGQAAWLCP*SVLSRH
Trigger: GTGTCGTGACAGTACAGATCAAGGACAAAGCCAAGC...AGCTTGGCCATGGCTTGTGATGACATCCAGAGAATGAAGGCCGACATGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CGGACACAGATGCCAGTCCTTTCACCAGTCTGTGGCAGACGTTGGGTCCAATTCGCAGAATGTTCCCTGTaGCTGTTGGGGATCGAACAT +
Preference number: 4 (lower is better)
Translates to: RTQMPVLSPVCGRRWVQFAECSL*LLGIEH
Trigger: ATGTTCGATCCCCAACAGTCACAGGGAACATTCTGC...GAATTGGACCCAACGTCTGCCACAGACTGGTGAAAGGACTGGCATCTGTGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCTCGGCACGAATCTCATaGGTGGGACTCTCCACCCCT +
Preference number: 4 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLSARIS*VGLSTP
Trigger: AGGGGTGGAGAGTCCCACTCATGAGATTCGTGCCGA...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp ATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTTCTCAGGGGGAATAAAAGGCTTTaGAGGCAGGGGGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: MLLLLSMRKMNSPWAFLRGNKRL*RQGVLQ
Trigger: TTGAAGGACCCCCTGCCTTCAAAGCCTTTTATTCCC...CCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR GCA 90 bp CAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCAGCCGATCACCGTGGTaGACTCATCCAGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: QSILNSRFSSQCRRSTNSSRSPW*THPGGT
Trigger: TGTACCCCCTGGATGAGTGCACCACGGTGATCGGCT...GCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCTGGTTGGTGCTGTATaGCCTCCGTCGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLLVGAV*PPSLRE
Trigger: CTCTCTCAGCGACGGAGGGCATACAGCACCAACCAG...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp AAGGCAGATGAAGGCCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCCACGGATCTCCAGCTaGAAGTTGAACTCATACTCC +
Preference number: 4 (lower is better)
Translates to: KADEGLQINLPPLDIQAGPRISS*KLNSYS
Trigger: GGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGG...ACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGGCCTTCATCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp GTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACAGGACATGGGGCATATaGGGCTCGCTGGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: VIAEHIELEILIPVPQKHRTWGI*GSLGWM
Trigger: CATCCACCCCAGCGAGCCCCATATGCCCCATGTCCT...GTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGATCCTTTCACCAGTCTGTaGCAGACGTTGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: LRVQHAVPAPLVRSGIGDPFTSL*QTLGPI
Trigger: AATTGGACCCAACGTCTGCCACAGACTGGTGAAAGG...ATCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CGGGTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGTCAATCTGCCACCGCTaGACATCCAGGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RVIAEHIELEILIPVPQKSICHR*TSRLVW
Trigger: CCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGA...CTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CTCTTGCTCACGTCCACAGGCACGAAGGCTGTGTATTTGCTAATGATGTTGCAGTCAATCTGCCACCGCTaGACATCCAGGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLLTSTGTKAVYLLMMLQSICHR*TSRLVW
Trigger: CCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGA...CTGCAACATCATTAGCAAATACACAGCCTTCGTGCCTGTGGACGTGAGCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
3UTR CAA 72 bp CTCTTGCTCACGTCCACAGGCACGAAGGCTGTGTATTaGCTAATGATGTTGCAGGCCTTGCTGGTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: LLLTSTGTKAVY*LMMLQALLVCK
Trigger: CTTGCACACCAGCAAGGCCTGCAACATCATTAGCAAATACACAGCCTTCGTGCCTGTGGACGTGAGCAAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp AGAATTGCCCCCAAATATAAAATTATCGTGTCCATGGTGCTGAGGCTGAGAAACGCAGGGCTGCCCCCGTaGTCCAATTCAGCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: RIAPKYKIIVSMVLRLRNAGLPP*SNSASR
Trigger: CCGGCTTGCTGAATTGGATCACGGGGGCAGCCCTGC...GTTTCTCAGCCTCAGCACCATGGACACGATAATTTTATATTTGGGGGCAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp AATGTCTTTGTGGAGGCGTTTTCGAATGATTTCTGTCTTCCGCTCTGCTCTGCTCCAGGTTGCCATAGGTaGGGGAGGCAGTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: NVFVEAFSNDFCLPLCSAPGCHR*GRQLGP
Trigger: TGGGCCTAACTGCCTCCCTCACCTATGGCAACCTGG...AGCAGAGCAGAGCGGAAGACAGAAATCATTCGAAAACGCCTCCACAAAGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp AGAATTGCCCCCAAATATAAAATTATCGTGTCCATGGTGCTGAGGCTGAGAAACGCTGGCGCTGACGGGTaGGACCAGGACCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RIAPKYKIIVSMVLRLRNAGADG*DQDLSG
Trigger: ACCACTGAGGTCCTGGTCTCACCCGTCAGCGCCAGC...GTTTCTCAGCCTCAGCACCATGGACACGATAATTTTATATTTGGGGGCAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp GTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCAGGGAAGGGGCTTGTGATTGGTaGTCTGGTTGGTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: VQRSITYNAIPHQPFSREGACDW*SGWCCM
Trigger: CATACAGCACCAACCAGATCACCAATCACAAGCCCC...TTCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp GAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTCGACTCCACAGTCCAAAGAGATTCTCTaGGGCCTTCATGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: ETPEVCSRSSGSRRSTPQSKEIL*GLHGRK
Trigger: CTTTCTTCCATGAAGGCCTCAGAGAATCTCTTTGGA...CTGTGGAGTCGACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR TCA 90 bp CCCACCCATGTCGGCCTTCATTCTCTGGATGTCATCACAAGCCATGGCCAAGCTGTAGCCTGGACTTGTTaGGATTTAGCCAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: PTHVGLHSLDVITSHGQAVAWTC*DLARIQ
Trigger: TTGGATCCTGGCTAAATCTCAACAAGTCCAGGCTAC...AGCTTGGCCATGGCTTGTGATGACATCCAGAGAATGAAGGCCGACATGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp GTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACAGGGGGACGTCCACTTaGGCTTCTCCATGGGGATGT +
Preference number: 4 (lower is better)
Translates to: VIAEHIELEILIPVPQKHRGTST*ASPWGC
Trigger: ACATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCT...GTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp CCCACCCATGTCGGCCTTCATTCTCTGGATGTCATCACAAGCCATGGCCAAGCTTCTTCCGCTCTGCTCTaGTCTTCTTCTTCATCCCTT +
Preference number: 4 (lower is better)
Translates to: PTHVGLHSLDVITSHGQASSALL*SSSSSL
Trigger: AAGGGATGAAGAAGAAGAGCAGAGCAGAGCGGAAGA...AGCTTGGCCATGGCTTGTGATGACATCCAGAGAATGAAGGCCGACATGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TCAGCAAGGGCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCTGGTTTCTGTCTTCCGCTCTaGTCTGCTCTTCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SARAANQSATAGHPGWSGFCLPL*SALLLH
Trigger: ATGAAGAAGAAGAGCAGAGCAGAGCGGAAGACAGAA...ACCAGACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCCCTTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp CTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGAGCTGCCAGACTCTGGGATTGGAGATGTaGAAAGAAGCATCACATACA +
Preference number: 4 (lower is better)
Translates to: LPARVRHPESGRRQSCQTLGLEM*KEASHT
Trigger: TGTATGTGATGCTTCTTTGCACATCTCCAATCCCAG...AGTCTGGCAGCTCTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp ACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGCAAAGCTATAGCACCTaGTGGAGAAGGCGTGATTTC +
Preference number: 4 (lower is better)
Translates to: TRCMLIPLMLLLLSMRKMQSYST*WRRRDF
Trigger: GAAATCACGCCTTCTCCACCAGGTGCTATAGCTTTG...CATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CCCACCCATGTCGGCCTTCATTCTCTGGATGTCATCACAAGCCATGGCCAAGCTCAAAGCTATAGCACCTaGTGGAGAAGGCGTGATTTC +
Preference number: 4 (lower is better)
Translates to: PTHVGLHSLDVITSHGQAQSYST*WRRRDF
Trigger: GAAATCACGCCTTCTCCACCAGGTGCTATAGCTTTG...AGCTTGGCCATGGCTTGTGATGACATCCAGAGAATGAAGGCCGACATGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTCTGTGGCAGACGTTaGGTCCAATTCCAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: HADPAHAAAPVNEEDELPVCGRR*VQFQSY
Trigger: ATAGCTTTGGAATTGGACCCAACGTCTGCCACAGAC...GGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp ATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTTCTCAGGGTCTGTGGCAGACGTTaGGTCCAATTCCAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: MLLLLSMRKMNSPWAFLRVCGRR*VQFQSY
Trigger: ATAGCTTTGGAATTGGACCCAACGTCTGCCACAGAC...CCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp GAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTGCCTTTCACCAGTCTGTaGCAGACGTTGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: EVGTEVEHDDGVVGNVFVPFTSL*QTLGPI
Trigger: AATTGGACCCAACGTCTGCCACAGACTGGTGAAAGG...CACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCAGGGACACGAATCTCATGAGTaGGACTCTCCACCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: CAKKHHIQCHTPPAVLQGHESHE*DSPPLS
Trigger: ACTCAGGGGTGGAGAGTCCCACTCATGAGATTCGTG...TCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp GTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCAGGGAATCTCCAGCTGGAAGTTaGACTCATACTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: VQRSITYNAIPHQPFSRESPAGS*THTPWG
Trigger: ACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGA...TTCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TCAGATCTGGGATTGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCCACTGCCACAGTGACTaGCTTCTGCACCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: SDLGLEMCKEASHTMPYPHCHSD*LLHPAL
Trigger: CAGTGCTGGGTGCAGAAGGCAGTCACTGTGGCAGTG...GGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCAATCCCAGATCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTGTCTTCCGCTCTGCTCTaGTCTTCTTCTTCATCCCTT +
Preference number: 4 (lower is better)
Translates to: EVGTEVEHDDGVVGNVFVSSALL*SSSSSL
Trigger: AAGGGATGAAGAAGAAGAGCAGAGCAGAGCGGAAGA...CACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp GTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGGACATGGGGCTGAGGCATGAGAATTaGTTGAACCTAGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: VLVKLSQGHVPFLYQDMGLRHEN*LNLGGR
Trigger: TCTACCTCCTAGGTTCAAGCAATTCTCATGCCTCAG...CCCCATGTCCTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR GCA 90 bp AAGGCAGATGAAGGCCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCCGAACATTCTACAGTaGACAGAATTGCCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: KADEGLQINLPPLDIQAGPNILQ*TELPPN
Trigger: ATTTGGGGGCAATTCTGTGCACTGTAGAATGTTCGG...ACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGGCCTTCATCTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp TCAGATCTGGGATTGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCTGCCTGTCTTTGCCCTaGGCCTGTTGGTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SDLGLEMCKEASHTMPYPCLSLP*ACWLEV
Trigger: CACCTCCAACCAACAGGCCCAGGGCAAAGACAGGCA...GGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCAATCCCAGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCAGGGAATGATGACGGAGTGGTaGGGAATGTCTTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CAKKHHIQCHTPPAVLQGMMTEW*GMSLWR
Trigger: CCTCCACAAAGACATTCCCCACCACTCCGTCATCAT...TCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp TCCCTTCAAGTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGAGCATGATGACGGAGTaGTGGGGAATGTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SLQVLVKLSQGHVPFLYQSMMTE*WGMSLW
Trigger: CCACAAAGACATTCCCCACCACTCCGTCATCATGCT...CTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCACTTGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp ATTTCGCACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCTCCATGTCATTTCCTaGTGCCGAATCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ISHQLQHLPCVVDSAICDLHVIS*CRIFSK
Trigger: CTTGGAGAAGATTCGGCACCAGGAAATGACATGGAG...ATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTGCGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp TCAGATCTGGGATTGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCGCTCCAGCCATGAGTTaGCCTTGGCAGCCACCAACT +
Preference number: 4 (lower is better)
Translates to: SDLGLEMCKEASHTMPYPAPAMS*PWQPPT
Trigger: AGTTGGTGGCTGCCAAGGCCAACTCATGGCTGGAGC...GGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCAATCCCAGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp CGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCAAAGAGATTCTCTACTGGAAGTTCAGCTTaGCTCAGGGGTGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RVSSLDLLRFSQDPKRFSTGSSA*LRGGAG
Trigger: ACCAGCTCCACCCCTGAGCCAAGCTGAACTTCCAGT...AGAGAATCTCTTTGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR TCA 90 bp CAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCGGAGGCGTTTTCGAATaGTTTCTGTCTTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: QSILNSRFSSQCRRSTNSGGVFE*FLSSAL
Trigger: CAGAGCGGAAGACAGAAATCATTCGAAAACGCCTCC...GCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR TCA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCCTTCTTCAAGGATTTaGCCATCTTGGGTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLPSSRI*PSWVAA
Trigger: GGCTGCAACCCAAGATGGTCAAATCCTTGAAGAAGG...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp AGAATTGCCCCCAAATATAAAATTATCGTGTCCATGGTGCTGAGGCTGAGAAACGGCAGGTGGATCACCTaGGGCCAGGAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: RIAPKYKIIVSMVLRLRNGRWIT*GQEFET
Trigger: AGTCTCGAACTCCTGGCCTCAGGTGATCCACCTGCC...GTTTCTCAGCCTCAGCACCATGGACACGATAATTTTATATTTGGGGGCAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp CCTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGACATTTTTGGTTGTCATaGTTGGGGATGGTGTTATTC +
Preference number: 4 (lower is better)
Translates to: PESAACCTGASCQIWDWRHFWLS*LGMVLF
Trigger: GAATAACACCATCCCCAATCATGACAACCAAAAATG...TCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR GCA 90 bp ACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGCTGGGATTGGAGATGTaGAAAGAAGCATCACATACA +
Preference number: 4 (lower is better)
Translates to: TRCMLIPLMLLLLSMRKMLGLEM*KEASHT
Trigger: TGTATGTGATGCTTCTTTGCACATCTCCAATCCCAG...CATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TTAGCCAGGATCCAAAGAGATTCTCTGAGGCCTTCATGGAAGAAAGAGTATTTGGCAGGTACCGGCTCTTaGTCACGTCCACAGGCACGA +
Preference number: 4 (lower is better)
Translates to: LARIQRDSLRPSWKKEYLAGTGS*SRPQAR
Trigger: TCGTGCCTGTGGACGTGAGCAAGAGCCGGTACCTGC...CAAATACTCTTTCTTCCATGAAGGCCTCAGAGAATCTCTTTGGATCCTGGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp TGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCAGGGATCAAATTCTCTCTGCTaGCAGGCATGGTTGCTCACT +
Preference number: 4 (lower is better)
Translates to: CAKKHHIQCHTPPAVLQGSNSLC*QAWLLT
Trigger: AGTGAGCAACCATGCCTGGCAGCAGAGAGAATTTGA...TCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp GTCTGGCTGGAAGGAAAAAGGCTCTTAAATGTGGATCCAAACCCAATGATATTGCCTGGGCCTGTTGGTTaGAGGTGCCAGTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VWLEGKRLLNVDPNPMILPGPVG*RCQCSW
Trigger: CCAAGAGCACTGGCACCTCCAACCAACAGGCCCAGG...CAATATCATTGGGTTTGGATCCACATTTAAGAGCCTTTTTCCTTCCAGCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp CGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCAAAGAGATTCTCTGTATCTCTTGGCAGCTaGCATGGGGTCACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: RVSSLDLLRFSQDPKRFSVSLGS*HGVTCH
Trigger: ATGGCAAGTGACCCCATGCCAGCTGCCAAGAGATAC...AGAGAATCTCTTTGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CCA 90 bp ATCTCCAGCTGGAAGTTGAACTCATACTCCATGGGGTTGGACACTTCGGTGTTCCACAGCTTTGATCAGTaGCTTGCTCAGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: ISSWKLNSYSMGLDTSVFHSFDQ*LAQEAL
Trigger: AAGGGCTTCCTGAGCAAGCCACTGATCAAAGCTGTG...GAACACCGAAGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp GTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACGGTTCTCCTGGGTTTTaGAGGCCAATGGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: VIAEHIELEILIPVPQKHGSPGF*RPMGPR
Trigger: TCTTGGTCCCATTGGCCTCCAAAACCCAGGAGAACC...GTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CCA 90 bp CATGAGGCTCTTAAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATAAATCCTCTCTGCCCTaGGTAAATGTATATCCCCTG +
Preference number: 4 (lower is better)
Translates to: HEALKGHQHGILDSVHADKSSLP*VNVYPL
Trigger: CAGGGGATATACATTTACCCAGGGCAGAGAGGATTT...ATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTTAAGAGCCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp GTCTGGCTGGAAGGAAAAAGGCTCTTAAATGTGGATCCAAACCCAATGATATTGAGGGGGACGTCCACTTaGGCTTCTCCATGGGGATGT +
Preference number: 4 (lower is better)
Translates to: VWLEGKRLLNVDPNPMILRGTST*ASPWGC
Trigger: ACATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCT...CAATATCATTGGGTTTGGATCCACATTTAAGAGCCTTTTTCCTTCCAGCCAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR GCA 90 bp CATGAGGCTCTTAAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATGGAATTTGTAGGAGGTaGAATCTAATGAGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: HEALKGHQHGILDSVHADGICRR*NLMRGN
Trigger: ATTCCCCCTCATTAGATTGCACCTCCTACAAATTCC...ATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTTAAGAGCCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp GAGGTCGGGACAGAAGTTGAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTGTGGGGAATGTCTTTGTaGAGGCGTTTTCGAATGATT +
Preference number: 4 (lower is better)
Translates to: EVGTEVEHDDGVVGNVFVWGMSL*RRFRMI
Trigger: AATCATTCGAAAACGCCTCCACAAAGACATTCCCCA...CACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTTCTGTCCCGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CCA 90 bp ATAAAGTCAAATGAAAGAGCACATGCAAATGTTCCTTGCCAACTGGGCAGTGTGTTTCTCAGGCACGGCTaGACTGACTGGAGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: IKSNERAHANVPCQLGSVFLRHG*TDWRSG
Trigger: TCCCGACCTCCAGTCAGTCCAGCCGTGCCTGAGAAA...CACACTGCCCAGTTGGCAAGGAACATTTGCATGTGCTCTTTCATTTGACTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp GAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTGGAGGCGTTTTCGAATGATAGTGCCCTACCTCTCTaGCTCTCAATTTCCACATCT +
Preference number: 4 (lower is better)
Translates to: EHDDGVVGNVFVEAFSNDSALPL*LSISTS
Trigger: AGATGTGGAAATTGAGAGCCAGAGAGGTAGGGCACT...ATCATTCGAAAACGCCTCCACAAAGACATTCCCCACCACTCCGTCATCATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR CAA 72 bp AAGTTGAGCATGATGACGGAGTGGTGGGGAATGTCTTaGTGGAGGCGTTTTCGAATGATTTCTGTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: KLSMMTEWWGMS*WRRFRMISVFR
Trigger: GCGGAAGACAGAAATCATTCGAAAACGCCTCCACAAAGACATTCCCCACCACTCCGTCATCATGCTCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR TCA 90 bp GTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACGTAGCCTGGACTTGTTaGGATTTAGCCAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: VIAEHIELEILIPVPQKHVAWTC*DLARIQ
Trigger: TTGGATCCTGGCTAAATCTCAACAAGTCCAGGCTAC...GTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR GCA 90 bp ATTCTACAGTGCACAGAATTGCCCCCAAATATAAAATTATCGTGTCCATGGTGCTGCCAGTGCTCTTGGTaGAGAACTGGGGCACGGTTG +
Preference number: 4 (lower is better)
Translates to: ILQCTELPPNIKLSCPWCCQCSW*RTGARL
Trigger: CAACCGTGCCCCAGTTCTGCACCAAGAGCACTGGCA...GCACCATGGACACGATAATTTTATATTTGGGGGCAATTCTGTGCACTGTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR GCA 90 bp AGTCAAATGAAAGAGCACATGCAAATGTTCCTTGCCAACTGGGCAGTGTGTGTGCTCTCAAATTCTCTCTaGTGCCAGGCATGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: SQMKEHMQMFLANWAVCVLSNSL*CQAWLL
Trigger: GAGCAACCATGCCTGGCAGCAGAGAGAATTTGAGAG...CACACACACTGCCCAGTTGGCAAGGAACATTTGCATGTGCTCTTTCATTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp AGTCAAATGAAAGAGCACATGCAAATGTTCCTTGCCAACTGGGCAGTGTGTGTGTGTCATCACAAGCCATaGCCAAGCTGTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: SQMKEHMQMFLANWAVCVCHHKP*PSCPHC
Trigger: ACAGTGAGGACAGCTTGGCCATGGCTTGTGATGACA...CACACACACTGCCCAGTTGGCAAGGAACATTTGCATGTGCTCTTTCATTTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp TTAGCCAGGATCCAAAGAGATTCTCTGAGGCCTTCATGGAAGAAAGAGTATTTGGTCCAAGGTCACCTGTaGCTGTTGGGGATCGAACAT +
Preference number: 4 (lower is better)
Translates to: LARIQRDSLRPSWKKEYLVQGHL*LLGIEH
Trigger: ATGTTCGATCCCCAACAGTCACAGGTGACCTTGGAC...CAAATACTCTTTCTTCCATGAAGGCCTCAGAGAATCTCTTTGGATCCTGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CCA 90 bp ATAAAGTCAAATGAAAGAGCACATGCAAATGTTCCTTGCCAACTGGGCAGTGTGATTGAAGAGGCAGGCTaGCATGAGGCTCTTAAGGGC +
Preference number: 4 (lower is better)
Translates to: IKSNERAHANVPCQLGSVIEEAG*HEALKG
Trigger: GCCCTTAAGAGCCTCATGCCAGCCTGCCTCTTCAAT...CACACTGCCCAGTTGGCAAGGAACATTTGCATGTGCTCTTTCATTTGACTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CCA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCTTTGGTTGTCATGATTaGGGATGGTGTTATTCCCAG +
Preference number: 4 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLFGCHD*GWCYSQ
Trigger: CTGGGAATAACACCATCCCCAATCATGACAACCAAA...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR TCA 90 bp AGAATTGCCCCCAAATATAAAATTATCGTGTCCATGGTGCTGAGGCTGAGAAACGGAGGCGTTTTCGAATaGTTTCTGTCTTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RIAPKYKIIVSMVLRLRNGGVFE*FLSSAL
Trigger: CAGAGCGGAAGACAGAAATCATTCGAAAACGCCTCC...GTTTCTCAGCCTCAGCACCATGGACACGATAATTTTATATTTGGGGGCAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473325.5
3UTR CAA 72 bp CAAGGGATGCTGCCGAACATTCTACAGTGCACAGAATaGCCCCCAAATATAAAATTATCGTGTCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: QGMLPNILQCTE*PPNIKLSCPWC
Trigger: GCACCATGGACACGATAATTTTATATTTGGGGGCAATTCTGTGCACTGTAGAATGTTCGGCAGCATCCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR GCA 90 bp ATTCTACAGTGCACAGAATTGCCCCCAAATATAAAATTATCGTGTCCATGGTGCGTTCTTCCCTTCAAGTaGTGGTCAAACTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ILQCTELPPNIKLSCPWCVLPFK*WSNSPR
Trigger: CCTGGGAGAGTTTGACCAGCACTTGAAGGGAAGAAC...GCACCATGGACACGATAATTTTATATTTGGGGGCAATTCTGTGCACTGTAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR GCA 90 bp GTCTGGCTGGAAGGAAAAAGGCTCTTAAATGTGGATCCAAACCCAATGATATTGTTCTGTCTTCCGCTCTaGTCTGCTCTTCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VWLEGKRLLNVDPNPMILFCLPL*SALLLH
Trigger: ATGAAGAAGAAGAGCAGAGCAGAGCGGAAGACAGAA...CAATATCATTGGGTTTGGATCCACATTTAAGAGCCTTTTTCCTTCCAGCCAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCCCTGGGCCACGGAGTTaGGGGCCCTGGTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RAAALSVPCVRPSGTSCCPGPRS*GPWFRS
Trigger: GGACCTGAACCAGGGCCCCAAACTCCGTGGCCCAGG...GCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS GCA 90 bp ACTGCTGGAGGTGCGGTCCGGGGCTGGGCTCCAGTGCCCAAGCCCTaGGCCCGCTGCCCTGGCAGCTGGCTTGATCAATGCCCACATTGC +
Preference number: 5 (lower is better)
Translates to: TAGGAVRGWAPVPKP*ARCPGSWLDQCPHC
Trigger: GCAATGTGGGCATTGATCAAGCCAGCTGCCAGGGCAGCGGGCGCAGGGCTTGGGCACTGGAGCCCAGCCCCGGACCGCACCTCCAGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000485375.6
CDS-3UTR CAA 90 bp GTGTGCCCTGCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGCCTGGGCCACGGAGTTaGGGGCCCTGGTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VCPACGPRVLPAAPAMSWPGPRS*GPWFRS
Trigger: GGACCTGAACCAGGGCCCCAAACTCCGTGGCCCAGG...CCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGCAGGGCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp AGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGAGCCATGAGTTGGCCTaGGCAGCCACCAACTCCCAC +
Preference number: 5 (lower is better)
Translates to: STNSWRAAALSVPCVRPSSHELA*AATNSH
Trigger: GTGGGAGTTGGTGGCTGCCAAGGCCAACTCATGGCT...CGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS TCA 90 bp GCCAAGCCTCTCTCCCACAGCGTGGCATGGCTCCAGAGGACCCCCTaGTCCCATGGTGCGACCTACTTGGTGGTGGCTCCCTCGTGCCTC +
Preference number: 5 (lower is better)
Translates to: AKPLSHSVAWLQRTP*SHGATYLVVAPSCL
Trigger: GAGGCACGAGGGAGCCACCACCAAGTAGGTCGCACCATGGGATCAGGGGGTCCTCTGGAGCCATGCCACGCTGTGGGAGAGAGGCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS-3UTR CAA 90 bp GAAGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCAGAGGTGCCAGTGCTCTaGGTGCAGAACTGGGGCACG +
Preference number: 5 (lower is better)
Translates to: EVGGRTVLQPCQPHHRGPEVPVL*VQNWGT
Trigger: CGTGCCCCAGTTCTGCACCAAGAGCACTGGCACCTC...TGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp CGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACTTGAGCTCCCACTGCAGGCGTaGGCTGTCGTGCAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: RAGGEGHSMAGEGGRPLELPLQA*AVVQAF
Trigger: AAAGGCCTGCACGACAGCCAACGCCTGCAGTGGGAG...CTCAAGTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GAAGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCAAGGGCAGCTCCAGAGTaGGGGTACTCCACCACGGTG +
Preference number: 5 (lower is better)
Translates to: EVGGRTVLQPCQPHHRGPRAAPE*GYSTTV
Trigger: CACCGTGGTGGAGTACCCCAACTCTGGAGCTGCCCT...TGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CGAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGGGGACTCGGGGTCTaGGACTCAGACGGGCGGGTG +
Preference number: 5 (lower is better)
Translates to: RDSHPSAAEAQTAGGQRPWGLGV*DSDGRV
Trigger: CACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCCA...AGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GCCAGAGGCTCCAGGGAGAAGCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGAGCCATGAGTTGGCCTaGGCAGCCACCAACTCCCAC +
Preference number: 5 (lower is better)
Translates to: ARGSREKLSQDGCLGGELSHELA*AATNSH
Trigger: GTGGGAGTTGGTGGCTGCCAAGGCCAACTCATGGCT...CAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGCTTCTCCCTGGAGCCTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGTGGCGGGCAGCGGCCTaGAGTGTGCCCTGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: HSLHLPARVRHPESGRRQWRAAA*SVPCVR
Trigger: CCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCA...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS TCA 90 bp CTCTTGGCCGAGCGGGCAGATGGGGCGGCGTCGGCACGAATCTCATaGGTGGGACTCTCCACCCCTGAGTGGCATAGAAAGGCAAGGGGG +
Preference number: 5 (lower is better)
Translates to: LLAERADGAASARIS*VGLSTPEWHRKARG
Trigger: CCCCCTTGCCTTTCTATGCCACTCAGGGGTGGAGAGTCCCACTCATGAGATTCGTGCCGACGCCGCCCCATCTGCCCGCTCGGCCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS GCA 90 bp GTGCCCAAGCCCTGCGCCCGCTGCCCTGGCAGCTGGCTTGATCAATaGCCACATTGCGATAGCTGTTTAGGTGGCCTGCAGGAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: VPKPCARCPGSWLDQ*PHCDSCLGGLQEAE
Trigger: CTCGGCCTCCTGCAGGCCACCTAAACAGCTATCGCAATGTGGGCATTGATCAAGCCAGCTGCCAGGGCAGCGGGCGCAGGGCTTGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 90 bp CTGCATCTGCATGTGGTGGGAGGTTGGGCCCTCGGGGCACTCTGTTaGAGGGACATTCCTGCTCCACCTGGACAAGGAGGCCCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LHLHVVGGWALGALC*RDIPAPPGQGGPQH
Trigger: GTGCTGGGGGCCTCCTTGTCCAGGTGGAGCAGGAATGTCCCTGCAACAGAGTGCCCCGAGGGCCCAACCTCCCACCACATGCAGATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp GGCTGGGCTCCAGTGCCCAAGCCCTGCGCCCGCTGCCCTGGCAGCTaGCTTGATCAATGCCCACATTGCGATAGCTGTTTAGGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: GWAPVPKPCARCPGS*LDQCPHCDSCLGGL
Trigger: CAGGCCACCTAAACAGCTATCGCAATGTGGGCATTGATCAAGCCAGCTGCCAGGGCAGCGGGCGCAGGGCTTGGGCACTGGAGCCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS-3UTR CAA 90 bp ACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGGTGCCCCCGAGTTCTaGGCACAGTCTCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: TRGLGLRRAGGEGHSMAGGAPEF*AQSPPS
Trigger: GGAAGGTGGAGACTGTGCCAAGAACTCGGGGGCACC...ACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp ATGAGTGGGACTCTCCACCCCTGCGAGCAGACATGGCCCACGGATCTCCAGCTGGGCAGGTACCGGCTCTaGCTCACGTCCACAGGCACG +
Preference number: 5 (lower is better)
Translates to: MSGTLHPCEQTWPTDLQLGRYRL*LTSTGT
Trigger: CGTGCCTGTGGACGTGAGCAAGAGCCGGTACCTGCC...CAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGGGTGGAGAGTCCCACTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS GCA 90 bp ACAAATCAGGCCTCCCCTGGCCAGAGCTGCCATCCCCAAAGGCACTaGAGCCAAGCCTCTCTCCCACAGCGTGGCATGGCTCCAGAGGAC +
Preference number: 5 (lower is better)
Translates to: TNQASPGQSCHPQRH*SQASLPQRGMAPED
Trigger: GTCCTCTGGAGCCATGCCACGCTGTGGGAGAGAGGCTTGGCTGCAGTGCCTTTGGGGATGGCAGCTCTGGCCAGGGGAGGCCTGATTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 90 bp TGGAGTTGGTCTCGAGCTGAGGGGCCTGAGACAGGGTTCTGCATCTaGATGTGGTGGGAGGTTGGGCCCTCGGGGCACTCTGTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: WSWSRAEGPETGFCI*MWWEVGPSGHSVAG
Trigger: CCCTGCAACAGAGTGCCCCGAGGGCCCAACCTCCCACCACATGCAGATGCAGAACCCTGTCTCAGGCCCCTCAGCTCGAGACCAACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp CTGCCATCCCCAAAGGCACTGCAGCCAAGCCTCTCTCCCACAGCGTaGCATGGCTCCAGAGGACCCCCTGATCCCATGGTGCGACCTACT +
Preference number: 5 (lower is better)
Translates to: LPSPKALQPSLSPTA*HGSRGPPDPMVRPT
Trigger: AGTAGGTCGCACCATGGGATCAGGGGGTCCTCTGGAGCCATGCCACGCTGTGGGAGAGAGGCTTGGCTGCAGTGCCTTTGGGGATGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp AGCCAAGCATACGCAGGGCAGCAGAGTTGGGGTACTCCACCACGGTaGGCAGGTACCGGCTCTTGCTCACGTCCACAGGCACGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SQAYAGQQSWGTPPR*AGTGSCSRPQARRL
Trigger: CAGCCTTCGTGCCTGTGGACGTGAGCAAGAGCCGGTACCTGCCCACCGTGGTGGAGTACCCCAACTCTGCTGCCCTGCGTATGCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375079.6
CDS CCA 90 bp ATCGTCTGCGGCCTTCCAAAGCCAGAAGAGGTGCCCCTCCACTGTTaGGCCAGGGCCCGAGAGCCAAGCATACGCAGGGCAGCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: IVCGLPKPEEVPLHC*ARAREPSIRRAAEL
Trigger: CAACTCTGCTGCCCTGCGTATGCTTGGCTCTCGGGCCCTGGCCCAACAGTGGAGGGGCACCTCTTCTGGCTTTGGAAGGCCGCAGACGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375079.6
CDS-3UTR CAA 90 bp GGTGCCCCCGAGTTCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTTGCCATGGTGGCTCTaGGGAGGGGCTTGTGATTGG +
Preference number: 5 (lower is better)
Translates to: GAPEFLAQSPPSSPGPSSLPWWL*GGACDW
Trigger: CCAATCACAAGCCCCTCCCAAGAGCCACCATGGCAA...GGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGAACTCGGGGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp TCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTGAAGGGGGACGTCCACTTGCCATGGTGGCTCTaGGGAGGGGCTTGTGATTGG +
Preference number: 5 (lower is better)
Translates to: SDGRVVRDTRWQVKGDVHLPWWL*GGACDW
Trigger: CCAATCACAAGCCCCTCCCAAGAGCCACCATGGCAA...GTGGACGTCCCCCTTCACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GCGTGCGGCCCTCGGGTACTTCCTGCTGCTCCAGCCATGAGTTGGCCTTGGCAGATGATGTTGCAGGCCTaGCTGGTGTGCAAGGCGCTC +
Preference number: 5 (lower is better)
Translates to: ACGPRVLPAAPAMSWPWQMMLQA*LVCKAL
Trigger: GAGCGCCTTGCACACCAGCAAGGCCTGCAACATCAT...CTGCCAAGGCCAACTCATGGCTGGAGCAGCAGGAAGTACCCGAGGGCCGCACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp ACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTTTGCTCAGGAAGCCCTaGGCTGCTCGCGTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: TRGLGLRRAGGEGHSMAGLLRKP*AARVSS
Trigger: GCTACTGACGCGAGCAGCCAAGGGCTTCCTGAGCAA...ACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GCCAGAGGCTCCAGGGAGAAGCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGGCTTTGATCAGTGGCTaGCTCAGGAAGCCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ARGSREKLSQDGCLGGELALISG*LRKPLA
Trigger: AGCCAAGGGCTTCCTGAGCAAGCCACTGATCAAAGC...CAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGCTTCTCCCTGGAGCCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS TCA 90 bp AGCAACACGTGTCTGGGTACACACTCTGTCTCTCCACTGCCACAGTaGCTGCCTTCTGCACCCAGCACTGCTGGAGGTGCGGTCCGGGGC +
Preference number: 5 (lower is better)
Translates to: SNTCLGTHSVSPLPQ*LPSAPSTAGGAVRG
Trigger: GCCCCGGACCGCACCTCCAGCAGTGCTGGGTGCAGAAGGCAGTCACTGTGGCAGTGGAGAGACAGAGTGTGTACCCAGACACGTGTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000485375.6
CDS GCA 90 bp GCCTTGGTGGCACTGACTTTGAGCCAACACCCCAGATTGGCATCCTaGCCCACCTGGGGTTGTGATGGCCACAGTGTCCAGGCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: ALVALTLSQHPRLAS*PTWGCDGHSVQACL
Trigger: CAGGCAGGCCTGGACACTGTGGCCATCACAACCCCAGGTGGGGCAGGATGCCAATCTGGGGTGTTGGCTCAAAGTCAGTGCCACCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 90 bp GGGCAGAGAGGTCCACGGTTGGGAGCTGTAGGCGTGGCCAGGAGCTaGTGCCAAGCCCCTGACCTTGGACAGATCTCTGCGGATCAGATT +
Preference number: 5 (lower is better)
Translates to: GQRGPRLGAVGVARS*CQAPDLGQISADQI
Trigger: AATCTGATCCGCAGAGATCTGTCCAAGGTCAGGGGCTTGGCAGCAGCTCCTGGCCACGCCTACAGCTCCCAACCGTGGACCTCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp GCACTGACTTTGAGCCAACACCCCAGATTGGCATCCTGCCCCACCTaGGGTTGTGATGGCCACAGTGTCCAGGCCTGCCTGCCTGGGTTC +
Preference number: 5 (lower is better)
Translates to: ALTLSQHPRLASCPT*GCDGHSVQACLPGF
Trigger: GAACCCAGGCAGGCAGGCCTGGACACTGTGGCCATCACAACCCCAGGTGGGGCAGGATGCCAATCTGGGGTGTTGGCTCAAAGTCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp TCTCGAGCTGAGGGGCCTGAGACAGGGTTCTGCATCTGCATGTGGTaGGAGGTTGGGCCCTCGGGGCACTCTGTTGCAGGGACATTCCTG +
Preference number: 5 (lower is better)
Translates to: SRAEGPETGFCICMW*EVGPSGHSVAGTFL
Trigger: CAGGAATGTCCCTGCAACAGAGTGCCCCGAGGGCCCAACCTCCCACCACATGCAGATGCAGAACCCTGTCTCAGGCCCCTCAGCTCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp TGGTCTCGAGCTGAGGGGCCTGAGACAGGGTTCTGCATCTGCATGTaGTGGGAGGTTGGGCCCTCGGGGCACTCTGTTGCAGGGACATTC +
Preference number: 5 (lower is better)
Translates to: WSRAEGPETGFCICM*WEVGPSGHSVAGTF
Trigger: GAATGTCCCTGCAACAGAGTGCCCCGAGGGCCCAACCTCCCACCACATGCAGATGCAGAACCCTGTCTCAGGCCCCTCAGCTCGAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS-3UTR CAA 90 bp AGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGGTGCAAGGCGCTCACTaGGTAGCGGCGGTTGGACCC +
Preference number: 5 (lower is better)
Translates to: RATNMASLTRCMLIPLMLVQGAH*VAAVGP
Trigger: GGGTCCAACCGCCGCTACCAAGTGAGCGCCTTGCAC...CAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp ACTCGGGGTCTTGGACTCAGACGGGCGGGTGGTGAGGGACACTCGATGGCAGGTAAGGGGGACGTCCACTaGAGCTTCTCCATGGGGATG +
Preference number: 5 (lower is better)
Translates to: TRGLGLRRAGGEGHSMAGKGDVH*SFSMGM
Trigger: CATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCTT...ACCTGCCATCGAGTGTCCCTCACCACCCGCCCGTCTGAGTCCAAGACCCCGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp TGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGTGGTTCTCCTGGGTTTaGGAGGCCAATGGGACCAAG +
Preference number: 5 (lower is better)
Translates to: CRRSTNSWRAAALSVPCVWFSWV*EANGTK
Trigger: CTTGGTCCCATTGGCCTCCAAAACCCAGGAGAACCA...CACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CAA 90 bp AGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCCTCGAGAGAGCAGTGGGACTaGCCTCCATGTCAGCAATTT +
Preference number: 5 (lower is better)
Translates to: STNSWRAAALSVPCVRPSREQWD*PPCQQF
Trigger: AAATTGCTGACATGGAGGCAAGTCCCACTGCTCTCT...CGAGGGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS GCA 90 bp CCCTGCGCCCGCTGCCCTGGCAGCTGGCTTGATCAATGCCCACATTaGGATAGCTGTTTAGGTGGCCTGCAGGAGGCCGAGCCATTTGTT +
Preference number: 5 (lower is better)
Translates to: PCARCPGSWLDQCPH*DSCLGGLQEAEPFV
Trigger: AACAAATGGCTCGGCCTCCTGCAGGCCACCTAAACAGCTATCGCAATGTGGGCATTGATCAAGCCAGCTGCCAGGGCAGCGGGCGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 90 bp CAGAGAGGTCCACGGTTGGGAGCTGTAGGCGTGGCCAGGAGCTGCTaGCAAGCCCCTGACCTTGGACAGATCTCTGCGGATCAGATTACC +
Preference number: 5 (lower is better)
Translates to: QRGPRLGAVGVARSC*QAPDLGQISADQIT
Trigger: GGTAATCTGATCCGCAGAGATCTGTCCAAGGTCAGGGGCTTGGCAGCAGCTCCTGGCCACGCCTACAGCTCCCAACCGTGGACCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS-3UTR CAA 90 bp CTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGAGCTGCCAGACTGCAATGGTCCCCAGGTaGGCCACGAACAGGATCCGC +
Preference number: 5 (lower is better)
Translates to: LPARVRHPESGRRQSCQTAMVPR*ATNRIR
Trigger: GCGGATCCTGTTCGTGGCCAACCTGGGGACCATTGC...AGTCTGGCAGCTCTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTCCCTGGGCCTGTTGGTaGGAGGTGCCAGTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: PAHAAAPVNEEDELPVGLPWACW*EVPVLL
Trigger: CAAGAGCACTGGCACCTCCAACCAACAGGCCCAGGG...AAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCTGGTGGGGAATGTCTTaGTGGAGGCGTTTTCGAATG +
Preference number: 5 (lower is better)
Translates to: QKHKQLAGSGLECALRAAWWGMS*WRRFRM
Trigger: CATTCGAAAACGCCTCCACAAAGACATTCCCCACCA...GGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp AGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGCGCAGTGGGTATCTCTaGGCAGCTGGCATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: RFSSQCRRSTNSWRAAALRSGYL*AAGMGS
Trigger: TGACCCCATGCCAGCTGCCAAGAGATACCCACTGCG...CAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS TCA 90 bp GAGCAGGCAAGGGCACGGGTAGCATGCCATAGGCACTTGAGGCTCTaGTGGGGACAAGCACCAGCCATGCCACTTGAGCCAAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: EQARARVACHRHLRL*WGQAPAMPLEPKPP
Trigger: AGGTGGCTTTGGCTCAAGTGGCATGGCTGGTGCTTGTCCCCATCAGAGCCTCAAGTGCCTATGGCATGCTACCCGTGCCCTTGCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp GGCTCCAGAGGACCCCCTGATCCCATGGTGCGACCTACTTGGTGGTaGCTCCCTCGTGCCTCAGTACAAGTGATGCAGTTCGCTTTACCC +
Preference number: 5 (lower is better)
Translates to: GSRGPPDPMVRPTWW*LPRASVQVMQFALP
Trigger: GGGTAAAGCGAACTGCATCACTTGTACTGAGGCACGAGGGAGCCACCACCAAGTAGGTCGCACCATGGGATCAGGGGGTCCTCTGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp TGGCATGGCTCCAGAGGACCCCCTGATCCCATGGTGCGACCTACTTaGTGGTGGCTCCCTCGTGCCTCAGTACAAGTGATGCAGTTCGCT +
Preference number: 5 (lower is better)
Translates to: WHGSRGPPDPMVRPT*WWLPRASVQVMQFA
Trigger: AGCGAACTGCATCACTTGTACTGAGGCACGAGGGAGCCACCACCAAGTAGGTCGCACCATGGGATCAGGGGGTCCTCTGGAGCCATGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp GCCATTGTCCAGGCTGAGGCCTGGAGACCCAGAATCAGACTCATCTaGTGGGGCAGGGAGGTGCTGGACAGCCCAGTTCAGCCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: AIVQAEAWRPRIRLI*WGREVLDSPVQPGY
Trigger: ATAACCAGGCTGAACTGGGCTGTCCAGCACCTCCCTGCCCCACCAGATGAGTCTGATTCTGGGTCTCCAGGCCTCAGCCTGGACAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS-3UTR CAA 90 bp TTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGATGGCCCTGGCAGCTGGCTaGATCAATGCCCACATTGCG +
Preference number: 5 (lower is better)
Translates to: LVVESPLASRAFLACPRMALAAG*INAHIA
Trigger: CGCAATGTGGGCATTGATCAAGCCAGCTGCCAGGGC...CATCCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp GAGCATGATGACGGAGTGGTGGGGAATGTCTTTGTGGAGGCGTTTTCGAATGATCCCCGCTGGGCAGCGTaGGGAGCTCCGAGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: EHDDGVVGNVFVEAFSNDPRWAA*GAPRRC
Trigger: GCACCTCCTCGGAGCTCCCAACGCTGCCCAGCGGGG...ATCATTCGAAAACGCCTCCACAAAGACATTCCCCACCACTCCGTCATCATGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp ACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCGAGGTGCCAGTGCTCTaGGTGCAGAACTGGGGCACG +
Preference number: 5 (lower is better)
Translates to: TNMASLTRCMLIPLMLLLEVPVL*VQNWGT
Trigger: CGTGCCCCAGTTCTGCACCAAGAGCACTGGCACCTC...GAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp TCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAGTGATGATGATGCTCTaGGCCGAGCGGGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: SWHSLHLPARVRHPESGRVMMML*AERADG
Trigger: CCCATCTGCCCGCTCGGCCAAGAGCATCATCATCAC...TCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGGTGATGATGATGCTCTaGGCCGAGCGGGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: HSLHLPARVRHPESGRRQVMMML*AERADG
Trigger: CCCATCTGCCCGCTCGGCCAAGAGCATCATCATCAC...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CCATCTTGGGTTGCAGCCGCTCCCCCTCCATCAGGAGCTCAGCACTGCCCTCGGTGGTGGGGAATGTCTTaGTGGAGGCGTTTTCGAATG +
Preference number: 5 (lower is better)
Translates to: PSWVAAAPPPSGAQHCPRWWGMS*WRRFRM
Trigger: CATTCGAAAACGCCTCCACAAAGACATTCCCCACCA...CCGAGGGCAGTGCTGAGCTCCTGATGGAGGGGGAGCGGCTGCAACCCAAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp AGTAGGAGGCCGAACTGTGCTCCAGCCATGCCAGCCCCACCACCGTGGCCCACACCAAACCCAATGATATaGAAGAGGCAGGCTGGCATG +
Preference number: 5 (lower is better)
Translates to: SRRPNCAPAMPAPPPWPTPNPMI*KRQAGM
Trigger: CATGCCAGCCTGCCTCTTCAATATCATTGGGTTTGG...TGTGGGCCACGGTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp TTGGTAGCGGCGGTTGGACCCCTGCTCGATCTCGCCCTCGCGCTCCGCCAGCTGTTGTCAGATCTGGGATaGGAGATGTGCAAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: LVAAVGPLLDLALALRQLLSDLG*EMCKEA
Trigger: TGCTTCTTTGCACATCTCCAATCCCAGATCTGACAA...CAGCTGGCGGAGCGCGAGGGCGAGATCGAGCAGGGGTCCAACCGCCGCTACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp TGCTTGGTGGTAGAGTCTCCGCTGGCTAGCCGGGCATTTTTGGCCTGCCCTAGGGCTAGCCGGGCATTTTaGGCCTGCCCTAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: CLVVESPLASRAFLACPRASRAF*ACPRMK
Trigger: CTTCATCCTAGGGCAGGCCAAAAATGCCCGGCTAGC...CCTAGGGCAGGCCAAAAATGCCCGGCTAGCCAGCGGAGACTCTACCACCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGCTAGCCGGGCATTTTaGGCCTGCCCTAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: EILIPVPQKHKQLAGSGLASRAF*ACPRMK
Trigger: CTTCATCCTAGGGCAGGCCAAAAATGCCCGGCTAGC...AAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CAGAAGCACAAACAGCTGGCGGGCAGCGGCCTTGAGTGTGCCCTGCGTGCGGCCACGAAGGCTGTGTATTaGCTAATGATGTTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: QKHKQLAGSGLECALRAATKAVY*LMMLQA
Trigger: GGCCTGCAACATCATTAGCAAATACACAGCCTTCGT...GGCCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CGAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTGTCGACTCCACAGCTTaGATCAGTGGCTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RDSHPSAAEAQTAGGQRPVDSTA*ISGLLR
Trigger: CCTGAGCAAGCCACTGATCAAAGCTGTGGAGTCGAC...AGGCCGCTGCCCGCCAGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGACCTTCAGAAGCACCTGGGGACTCGGGGTCTaGGACTCAGACGGGCGGGTG +
Preference number: 5 (lower is better)
Translates to: HGRKSICSQAALGTFRSTWGLGV*DSDGRV
Trigger: CACCCGCCCGTCTGAGTCCAAGACCCCGAGTCCCCA...GGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCTGGCGGGCAGCGGCCTaGAGTGTGCCCTGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: QSILNSRFSSQCRRSTNSWRAAA*SVPCVR
Trigger: CCGCACGCAGGGCACACTCAAGGCCGCTGCCCGCCA...GCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS TCA 90 bp CCTCAAACATGTTGCAGAGCTCCAGTGGCCGGTGCGGGAGCAGTCTaGGGAACTTTCCTAGAGAAGTGGGTGGCATGCCCACCACCTTGC +
Preference number: 5 (lower is better)
Translates to: PQTCCRAPVAGAGAV*GTFLEKWVACPPPC
Trigger: GCAAGGTGGTGGGCATGCCACCCACTTCTCTAGGAAAGTTCCTCAGACTGCTCCCGCACCGGCCACTGGAGCTCTGCAACATGTTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp TTTGCCCGCAGAGAAGGGACTGGCTGGGGAAACATGGGTGCCGGCTaGAAACCGAGGCCGCTTATGGACAAGTCCAGTGTAAGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: FARREGTGWGNMGAG*KPRPLMDKSSVSLP
Trigger: TGGCAGACTTACACTGGACTTGTCCATAAGCGGCCTCGGTTTCCAGCCGGCACCCATGTTTCCCCAGCCAGTCCCTTCTCTGCGGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp CAAGGGGGATATAGGCTCATGAGGTCAGGAGAGAGAGGAGTTCGCTaGGGCACACCGAGATCCAGGCCAGAGATGAGTGACATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: QGGYRLMRSGERGVR*GTPRSRPEMSDMPA
Trigger: GGCTGGCATGTCACTCATCTCTGGCCTGGATCTCGGTGTGCCCCAGCGAACTCCTCTCTCTCCTGACCTCATGAGCCTATATCCCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CAA 90 bp CAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGCAATGGTCCCCAGGTaGGCCACGAACAGGATCCGC +
Preference number: 5 (lower is better)
Translates to: QLQHLPCVVDSAICDHEEAMVPR*ATNRIR
Trigger: GCGGATCCTGTTCGTGGCCAACCTGGGGACCATTGC...CTCTTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCAAAGAGATTCTCTCCCCGCTGGGCAGCGTaGGGAGCTCCGAGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: RVSSLDLLRFSQDPKRFSPRWAA*GAPRRC
Trigger: GCACCTCCTCGGAGCTCCCAACGCTGCCCAGCGGGG...AGAGAATCTCTTTGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp CTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGCCCTGGGCCTGTTGGTaGGAGGTGCCAGTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: LQHLPCVVDSAICDHEEEPWACW*EVPVLL
Trigger: CAAGAGCACTGGCACCTCCAACCAACAGGCCCAGGG...CTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp ATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCAAGCAGTGCCTGTCTTaGCCCTGGGCCTGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: IPLMLLLLSMRKMNSPWAKQCLS*PWACWL
Trigger: CAACCAACAGGCCCAGGGCAAAGACAGGCACTGCTT...GGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp TCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAAGGATTTGACCATCTaGGGTTGCAGCCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: SWHSLHLPARVRHPESGRKDLTI*GCSRSP
Trigger: GGGGGAGCGGCTGCAACCCAAGATGGTCAAATCCTT...TCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGATGGTGCCCCCGAGTTCTaGGCACAGTCTCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: LRVQHAVPAPLVRSGIGDGAPEF*AQSPPS
Trigger: GGAAGGTGGAGACTGTGCCAAGAACTCGGGGGCACC...ATCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp AAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTCGCAGTGGGTATCTCTaGGCAGCTGGCATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: KGHQHGILDSVHADPAHARSGYL*AAGMGS
Trigger: TGACCCCATGCCAGCTGCCAAGAGATACCCACTGCG...AGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGACCTTCAGAAGCACCGGCAGGTACCGGCTCTaGCTCACGTCCACAGGCACG +
Preference number: 5 (lower is better)
Translates to: HGRKSICSQAALGTFRSTGRYRL*LTSTGT
Trigger: CGTGCCTGTGGACGTGAGCAAGAGCCGGTACCTGCC...GGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATGGGGCGGCGTCACATGCAAATGTTCCTaGCCAACTGGGCAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VGQGDDDALGRAGRWGGVTCKCS*PTGQCV
Trigger: CACACACTGCCCAGTTGGCAAGGAACATTTGCATGT...GACGCCGCCCCATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS TCA 90 bp CCCCACCTGCGAGCAGACATGGCCCACGGATCTCCAGCTGGAAGTTaGACTCATACTCCATGGGGTTGGACACTTCGGTGTTCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: PHLRADMAHGSPAGS*THTPWGWTLRCSGE
Trigger: CTCTCCTGAACACCGAAGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS GCA 90 bp CTACTCAGCCTTCAGAACCCTCATCCTGGCCTGATCCCTCCTAGATaGTTCTCCATAGAGTTGGGGTCCCCTACCTGTGTGGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LLSLQNPHPGLIPPR*FSIELGSPTCVGSA
Trigger: GGCTGAGCCCACACAGGTAGGGGACCCCAACTCTATGGAGAAGCATCTAGGAGGGATCAGGCCAGGATGAGGGTTCTGAAGGCTGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530722.5
CDS CCA 90 bp CATGGCTCCAGAGGACCCCCTGATCCCATGGTGCGACCTACTTGGTaGTGGCTCCCTCGTGCCTCAGTACAAGTGATGCAGTTCGCTTTA +
Preference number: 5 (lower is better)
Translates to: HGSRGPPDPMVRPTW*WLPRASVQVMQFAL
Trigger: TAAAGCGAACTGCATCACTTGTACTGAGGCACGAGGGAGCCACCACCAAGTAGGTCGCACCATGGGATCAGGGGGTCCTCTGGAGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp ATTGTCCAGGCTGAGGCCTGGAGACCCAGAATCAGACTCATCTGGTaGGGCAGGGAGGTGCTGGACAGCCCAGTTCAGCCTGGTTATGTA +
Preference number: 5 (lower is better)
Translates to: IVQAEAWRPRIRLIW*GREVLDSPVQPGYV
Trigger: TACATAACCAGGCTGAACTGGGCTGTCCAGCACCTCCCTGCCCCACCAGATGAGTCTGATTCTGGGTCTCCAGGCCTCAGCCTGGACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp ATGCCATTCATTTTGCCCGCAGAGAAGGGACTGGCTGGGGAAACATaGGTGCCGGCTGGAAACCGAGGCCGCTTATGGACAAGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: MPFILPAEKGLAGET*VPAGNRGRLWTSPV
Trigger: CACTGGACTTGTCCATAAGCGGCCTCGGTTTCCAGCCGGCACCCATGTTTCCCCAGCCAGTCCCTTCTCTGCGGGCAAAATGAATGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS-3UTR CAA 90 bp CCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTAGGTCGGGACAGAAGTaGAGCATGATGACGGAGTGG +
Preference number: 5 (lower is better)
Translates to: PAHAAAPVNEEDELPVGLRSGQK*SMMTEW
Trigger: CCACTCCGTCATCATGCTCAACTTCTGTCCCGACCT...AAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp ATTTCGCACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATGGTGCCCCCGAGTTCTaGGCACAGTCTCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: ISHQLQHLPCVVDSAICDGAPEF*AQSPPS
Trigger: GGAAGGTGGAGACTGTGCCAAGAACTCGGGGGCACC...ATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTGCGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CAGAGACACCAGAGGTATGTAGTCGAAGCTCTGGTTCCCGGAGGTCGACTCCACGCTAGCCGGGCATTTTaGGCCTGCCCTAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: QRHQRYVVEALVPGGRLHASRAF*ACPRMK
Trigger: CTTCATCCTAGGGCAGGCCAAAAATGCCCGGCTAGC...GTGGAGTCGACCTCCGGGAACCAGAGCTTCGACTACATACCTCTGGTGTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp TCCCTTCAAGTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGCTGTCGTGCAGGCCTTaGACCAGGGCCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SLQVLVKLSQGHVPFLYQLSCRP*TRALPS
Trigger: GCTGGGCAAGGCCCTGGTCAAAGGCCTGCACGACAG...CTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCACTTGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp CATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGACCTTCAGAAGCACCCTCCCACTGCAGGCGTaGGCTGTCGTGCAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: HGRKSICSQAALGTFRSTLPLQA*AVVQAF
Trigger: AAAGGCCTGCACGACAGCCAACGCCTGCAGTGGGAG...GGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp TTCTCTGAGGCCTTCATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGAGTGCAAGGCGCTCACTaGGTAGCGGCGGTTGGACCC +
Preference number: 5 (lower is better)
Translates to: FSEAFMEERVFVARLRWGVQGAH*VAAVGP
Trigger: GGGTCCAACCGCCGCTACCAAGTGAGCGCCTTGCAC...TCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATGAAGGCCTCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp ATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTTCTCAGGTTGCTCAGGAAGCCCTaGGCTGCTCGCGTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: MLLLLSMRKMNSPWAFLRLLRKP*AARVSS
Trigger: GCTACTGACGCGAGCAGCCAAGGGCTTCCTGAGCAA...CCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp GCTGTCACAGGACGGGTGCCTAGGCGGGGAGCTGGTGCACAGCTGGGGACTCGGAATGGGACCAAGAAGTaGAGAGAACACTTTGATTCT +
Preference number: 5 (lower is better)
Translates to: AVTGRVPRRGAGAQLGTRNGTKK*REHFDS
Trigger: AGAATCAAAGTGTTCTCTCAACTTCTTGGTCCCATT...CCGAGTCCCCAGCTGTGCACCAGCTCCCCGCCTAGGCACCCGTCCTGTGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS GCA 90 bp GGCTTTGTCCTTGATCTGTACTGTCACGACACGGTCGGCAATGACTaGCTCAAAGCCGATCACCGTGGTGCACTCATCCAGGGGGTACAC +
Preference number: 5 (lower is better)
Translates to: GFVLDLYCHDTVGND*LKADHRGALIQGVH
Trigger: GTGTACCCCCTGGATGAGTGCACCACGGTGATCGGCTTTGAGGCAGTCATTGCCGACCGTGTCGTGACAGTACAGATCAAGGACAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000485375.6
ENST00000530722.5
ENST00000534075.1
CDS GCA 90 bp CATTCATTTTGCCCGCAGAGAAGGGACTGGCTGGGGAAACATGGGTaGCGGCTGGAAACCGAGGCCGCTTATGGACAAGTCCAGTGTAAG +
Preference number: 5 (lower is better)
Translates to: HSFCPQRRDWLGKHG*RLETEAAYGQVQCK
Trigger: CTTACACTGGACTTGTCCATAAGCGGCCTCGGTTTCCAGCCGGCACCCATGTTTCCCCAGCCAGTCCCTTCTCTGCGGGCAAAATGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp ACCCCGTCTTGCAGAATGTTCCCTGTGACTGTTGGGGATCGAACATaGGAGGCATCGAAGTGGCCGCTCTCCAGCTTGGCTTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: TPSCRMFPVTVGDRT*EASKWPLSSLALSL
Trigger: CAAGGACAAAGCCAAGCTGGAGAGCGGCCACTTCGATGCCTCCCATGTTCGATCCCCAACAGTCACAGGGAACATTCTGCAAGACGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000534075.1
CDS CCA 90 bp ACTCATCTGGTGGGGCAGGGAGGTGCTGGACAGCCCAGTTCAGCCTaGTTATGTAGAGGAAGAAAGAGGCCCAGAACACACACGCCACTT +
Preference number: 5 (lower is better)
Translates to: THLVGQGGAGQPSSA*LCRGRKRPRTHTPL
Trigger: AAGTGGCGTGTGTGTTCTGGGCCTCTTTCTTCCTCTACATAACCAGGCTGAACTGGGCTGTCCAGCACCTCCCTGCCCCACCAGATGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp GTAGCACTAGTTCTATGCTGGCAGAGACCGGTTCACCTCAAGCCCTaGCCATTGTCCAGGCTGAGGCCTGGAGACCCAGAATCAGACTCA +
Preference number: 5 (lower is better)
Translates to: VALVLCWQRPVHLKP*PLSRLRPGDPESDS
Trigger: TGAGTCTGATTCTGGGTCTCCAGGCCTCAGCCTGGACAATGGCCAGGGCTTGAGGTGAACCGGTCTCTGCCAGCATAGAACTAGTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp ACCGAGGCCGCTTATGGACAAGTCCAGTGTAAGTCTGCCAAAGGATaGGGCCCAGTTATCCTGGCATCTGGAGTTGGTCTCGAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: TEAAYGQVQCKSAKG*GPVILASGVGLELR
Trigger: CCTCAGCTCGAGACCAACTCCAGATGCCAGGATAACTGGGCCCCATCCTTTGGCAGACTTACACTGGACTTGTCCATAAGCGGCCTCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp AGAGAGATGTGCATTTGGGCATTTGGACCCCTGAATGATAGGTGCTaGGGTGTCACACAGGATCCAGCCAGGCAGGTCAATGGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: REMCIWAFGPLNDRC*GVTQDPARQVNGAG
Trigger: GCCTGCCCCATTGACCTGCCTGGCTGGATCCTGTGTGACACCCCAGCACCTATCATTCAGGGGTCCAAATGCCCAAATGCACATCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp CCAAATCCTCGTCCAAGGTCACCTGTGACTGTTGGGGATCGAACATaGGAGGCATCGAAGTGGCCGCTCTCCAGCTTGGCTTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PNPRPRSPVTVGDRT*EASKWPLSSLALSL
Trigger: CAAGGACAAAGCCAAGCTGGAGAGCGGCCACTTCGATGCCTCCCATGTTCGATCCCCAACAGTCACAGGTGACCTTGGACGAGGATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp ACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCTGGCCGCTCTCCAGCTaGGCTTTGTCCTTGATCTGT +
Preference number: 5 (lower is better)
Translates to: TNMASLTRCMLIPLMLLLWPLSS*ALSLIC
Trigger: ACAGATCAAGGACAAAGCCAAGCTGGAGAGCGGCCA...GAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GAGCAGGAAGGCTCCGGAGGCCAGCTGCAGAGACACCAGAGGTATGTAGTCGAAACCAACATGGCATCCTaGACTCGGTGCATGCTGATC +
Preference number: 5 (lower is better)
Translates to: EQEGSGGQLQRHQRYVVETNMAS*TRCMLI
Trigger: GATCAGCATGCACCGAGTCAAGGATGCCATGTTGGT...TTCGACTACATACCTCTGGTGTCTCTGCAGCTGGCCTCCGGAGCCTTCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp CTGCCCTCGGACACAGATGCCAGTCCTTTCACCAGTCTGTGGCAGACGTTGGGTTGCCTGATGACCCACTaGAGAGGGGAAAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: LPSDTDASPFTSLWQTLGCLMTH*RGERML
Trigger: CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCA...ACCCAACGTCTGCCACAGACTGGTGAAAGGACTGGCATCTGTGTCCGAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp ACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGCTGCTCAGCACCTTCCCTGTGTaGTTGACAGCGCCATCTGTG +
Preference number: 5 (lower is better)
Translates to: TNMASLTRCMLIPLMLLLSTFPV*LTAPSV
Trigger: CACAGATGGCGCTGTCAACAACACAGGGAAGGTGCT...GAGCAGCAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CCCTTGGCTGCTCGCGTCAGTAGCCTGGACTTGTTGAGATTTAGCCAGGATCCATTGCCATGGTGGCTCTaGGGAGGGGCTTGTGATTGG +
Preference number: 5 (lower is better)
Translates to: PLAARVSSLDLLRFSQDPLPWWL*GGACDW
Trigger: CCAATCACAAGCCCCTCCCAAGAGCCACCATGGCAA...TGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACTGACGCGAGCAGCCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGACCTTCAGAAGCACCCGCAGTGGGTATCTCTaGGCAGCTGGCATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: HGRKSICSQAALGTFRSTRSGYL*AAGMGS
Trigger: TGACCCCATGCCAGCTGCCAAGAGATACCCACTGCG...GGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CGGGTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCTGTCGTGCAGGCCTTaGACCAGGGCCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RVIAEHIELEILIPVPQKLSCRP*TRALPS
Trigger: GCTGGGCAAGGCCCTGGTCAAAGGCCTGCACGACAG...CTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CACCAGCTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAATGATGTTGCAGGCCTaGCTGGTGTGCAAGGCGCTC +
Preference number: 5 (lower is better)
Translates to: HQLQHLPCVVDSAICDHEMMLQA*LVCKAL
Trigger: GAGCGCCTTGCACACCAGCAAGGCCTGCAACATCAT...TTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp CTGTTCAGCAAGGGCTGCAAATCAATCTGCCACCGCTGGACATCCAGGCTGGTCGCTTTGATCAGTGGCTaGCTCAGGAAGCCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LFSKGCKSICHRWTSRLVALISG*LRKPLA
Trigger: AGCCAAGGGCTTCCTGAGCAAGCCACTGATCAAAGC...GACCAGCCTGGATGTCCAGCGGTGGCAGATTGATTTGCAGCCCTTGCTGAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS TCA 90 bp CGCTCCAAATCCTCGTCCAAGGTCACCTTTCCCGGTGTGCAGGAATaGGGGGCTATGGAAACCCCGTCTTGCAGAATGTTCCCTGTGACT +
Preference number: 5 (lower is better)
Translates to: RSKSSSKVTFPGVQE*GAMETPSCRMFPVT
Trigger: AGTCACAGGGAACATTCTGCAAGACGGGGTTTCCATAGCCCCTCATTCCTGCACACCGGGAAAGGTGACCTTGGACGAGGATTTGGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000534075.1
CDS GCA 90 bp ACAGGATCCGCTCCAAATCCTCGTCCAAGGTCACCTTTCCCGGTGTaGAGGAATGAGGGGCTATGGAAACCCCGTCTTGCAGAATGTTCC +
Preference number: 5 (lower is better)
Translates to: TGSAPNPRPRSPFPV*RNEGLWKPRLAECS
Trigger: GGAACATTCTGCAAGACGGGGTTTCCATAGCCCCTCATTCCTGCACACCGGGAAAGGTGACCTTGGACGAGGATTTGGAGCGGATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000534075.1
CDS GCA 90 bp ATTCATTCATTTCACCAAACAAATCAGGCCTCCCCTGGCCAGAGCTaGCATCCCCAAAGGCACTGCAGCCAAGCCTCTCTCCCACAGCGT +
Preference number: 5 (lower is better)
Translates to: IHSFHQTNQASPGQS*HPQRHCSQASLPQR
Trigger: ACGCTGTGGGAGAGAGGCTTGGCTGCAGTGCCTTTGGGGATGGCAGCTCTGGCCAGGGGAGGCCTGATTTGTTTGGTGAAATGAATGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 90 bp CAGTTTTCTTGGGCCTCAAACATGTTGCAGAGCTCCAGTGGCCGGTaGGGGAGCAGTCTGAGGAACTTTCCTAGAGAAGTGGGTGGCATG +
Preference number: 5 (lower is better)
Translates to: QFSWASNMLQSSSGR*GSSLRNFPREVGGM
Trigger: CATGCCACCCACTTCTCTAGGAAAGTTCCTCAGACTGCTCCCGCACCGGCCACTGGAGCTCTGCAACATGTTTGAGGCCCAAGAAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS-3UTR CAA 90 bp AGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTGCTCTCCAGCTTGGCTTaGTCCTTGATCTGTACTGTC +
Preference number: 5 (lower is better)
Translates to: RATNMASLTRCMLIPLMLLSSLA*SLICTV
Trigger: GACAGTACAGATCAAGGACAAAGCCAAGCTGGAGAG...CAGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp ATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTTCTCAGGTGGCCGCTCTCCAGCTaGGCTTTGTCCTTGATCTGT +
Preference number: 5 (lower is better)
Translates to: MLLLLSMRKMNSPWAFLRWPLSS*ALSLIC
Trigger: ACAGATCAAGGACAAAGCCAAGCTGGAGAGCGGCCA...CCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CCTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGATCATACTCCATGGGGTaGGACACTTCGGTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PESAACCTGASCQIWDWRSYSMG*DTSVFR
Trigger: CCTGAACACCGAAGTGTCCAACCCCATGGAGTATGA...TCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCAGGGAAAGAGGGGAAAGGATGTaGGTCCCACCCATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: VQRSITYNAIPHQPFSRERGERM*VPPMSA
Trigger: GGCCGACATGGGTGGGACCAACATCCTTTCCCCTCT...TTCCCTGGAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp AAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTTGCCTGATGACCCACTaGAGAGGGGAAAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: KGHQHGILDSVHADPAHACLMTH*RGERML
Trigger: CAACATCCTTTCCCCTCTCAAGTGGGTCATCAGGCA...AGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp AAGGGCCACCAACATGGCATCCTTGACTCGGTGCATGCTGATCCCGCTCATGCTACCTTCCCTGTGTTGTaGACAGCGCCATCTGTGATC +
Preference number: 5 (lower is better)
Translates to: KGHQHGILDSVHADPAHATFPVL*TAPSVI
Trigger: GATCACAGATGGCGCTGTCAACAACACAGGGAAGGT...AGCATGAGCGGGATCAGCATGCACCGAGTCAAGGATGCCATGTTGGTGGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCAGCACCTTCCCTGTGTaGTTGACAGCGCCATCTGTG +
Preference number: 5 (lower is better)
Translates to: HADPAHAAAPVNEEDELPSTFPV*LTAPSV
Trigger: CACAGATGGCGCTGTCAACAACACAGGGAAGGTGCT...GGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGACAGGCCTTCTTCAAGGATTaGACCATCTTGGGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: HSLHLPARVRHPESGRRQAFFKD*TILGCS
Trigger: GCTGCAACCCAAGATGGTCAAATCCTTGAAGAAGGC...CTGTCTTCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGGACATGGGGAGGTTCAGATCGTGCTaGGTGGTAGAGTCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: VLVKLSQGHVPFLYQDMGRFRSC*VVESPL
Trigger: CAGCGGAGACTCTACCACCAAGCACGATCTGAACCT...CCCCATGTCCTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CGGGTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGAGGGCAGCTCCAGAGTaGGGGTACTCCACCACGGTG +
Preference number: 5 (lower is better)
Translates to: RVIAEHIELEILIPVPQKRAAPE*GYSTTV
Trigger: CACCGTGGTGGAGTACCCCAACTCTGGAGCTGCCCT...CTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGGACATGGGGGTCGACTCCACAGCTTaGATCAGTGGCTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VLVKLSQGHVPFLYQDMGVDSTA*ISGLLR
Trigger: CCTGAGCAAGCCACTGATCAAAGCTGTGGAGTCGAC...CCCCATGTCCTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp ATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCGTGGGCCTTTCTCAGGTGTAATCCCAGTGCTTaGGGAGTTCGAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: MLLLLSMRKMNSPWAFLRCNPSA*GVRGRW
Trigger: CCACCTGCCTCGAACTCCCAAAGCACTGGGATTACA...CCTGAGAAAGGCCCACGGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS TCA 90 bp ATTCATCAGCCACAGCAAGTGGCAGTGAGTGGCAGCTCAGGTCAGTaGAGGCTAGGGGATGCCATTCATTTTGCCCGCAGAGAAGGGACT +
Preference number: 5 (lower is better)
Translates to: IHQPQQVAVSGSSGQ*RLGDAIHFARREGT
Trigger: AGTCCCTTCTCTGCGGGCAAAATGAATGGCATCCCCTAGCCTTCACTGACCTGAGCTGCCACTCACTGCCACTTGCTGTGGCTGATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp TGGCTACTCAGCCTTCAGAACCTTACCCCAGAAGCAACACGTGTCTaGGTACACACTCTGTCTCTCCACTGCCACAGTGACTGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: WLLSLQNLTPEATRV*VHTLSLHCHSDCLL
Trigger: CAGAAGGCAGTCACTGTGGCAGTGGAGAGACAGAGTGTGTACCCAGACACGTGTTGCTTCTGGGGTAAGGTTCTGAAGGCTGAGTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000485375.6
CDS CCA 90 bp TTCTTGGTTGCTCCTGCTAGGCATCTTGTAGCACTAGTTCTATGCTaGCAGAGACCGGTTCACCTCAAGCCCTGGCCATTGTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: FLVAPARHLVALVLC*QRPVHLKPWPLSRL
Trigger: CAGCCTGGACAATGGCCAGGGCTTGAGGTGAACCGGTCTCTGCCAGCATAGAACTAGTGCTACAAGATGCCTAGCAGGAGCAACCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp GCCAAGCTCCAAAAAGGACAGGGACAGCACCTCGTATGTTCACTGTaGTACCCCAGTATGCCATGCCTGGCATACAGTAGGCACCCAGTA +
Preference number: 5 (lower is better)
Translates to: AKLQKGQGQHLVCSL*YPSMPCLAYSRHPV
Trigger: TACTGGGTGCCTACTGTATGCCAGGCATGGCATACTGGGGTACCACAGTGAACATACGAGGTGCTGTCCCTGTCCTTTTTGGAGCTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp TCAATTTCCCCACCTGCGAGCAGACATGGCCCACGGATCTCCAGCTaGAAGTTGAACTCATACTCCATGGGGTTGGACACTTCGGTGTTC +
Preference number: 5 (lower is better)
Translates to: SISPPASRHGPRISS*KLNSYSMGLDTSVF
Trigger: GAACACCGAAGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGTGGGGAAATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CAA 90 bp TCTTGGCACAGTCTCCACCTTCCAGCCCGGGTCCGTCATCCTGAGAGTGGTAGAAGCTTGGCTTTGTCCTaGATCTGTACTGTCACGACA +
Preference number: 5 (lower is better)
Translates to: SWHSLHLPARVRHPESGRSLALS*ICTVTT
Trigger: TGTCGTGACAGTACAGATCAAGGACAAAGCCAAGCT...TCTACCACTCTCAGGATGACGGACCCGGGCTGGAAGGTGGAGACTGTGCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp TTCTCTGAGGCCTTCATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGAAAGCAGTGCCTGTCTTaGCCCTGGGCCTGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: FSEAFMEERVFVARLRWGKQCLS*PWACWL
Trigger: CAACCAACAGGCCCAGGGCAAAGACAGGCACTGCTT...TCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATGAAGGCCTCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp CATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCTCATACTCCATGGGGTaGGACACTTCGGTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: HADPAHAAAPVNEEDELPSYSMG*DTSVFR
Trigger: CCTGAACACCGAAGTGTCCAACCCCATGGAGTATGA...GGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGATCGGTCAAAGGTGTGCTaGTTGGCCAAGGTGATGATG +
Preference number: 5 (lower is better)
Translates to: LRVQHAVPAPLVRSGIGDRSKVC*LAKVMM
Trigger: CATCATCACCTTGGCCAACAAGCACACCTTTGACCG...ATCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGGACATGGGGACCAACATGGCATCCTaGACTCGGTGCATGCTGATC +
Preference number: 5 (lower is better)
Translates to: VLVKLSQGHVPFLYQDMGTNMAS*TRCMLI
Trigger: GATCAGCATGCACCGAGTCAAGGATGCCATGTTGGT...CCCCATGTCCTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCAGAGGGGAAAGGATGTaGGTCCCACCCATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLRGERM*VPPMSA
Trigger: GGCCGACATGGGTGGGACCAACATCCTTTCCCCTCT...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGGACATGGGGACCTTCCCTGTGTTGTaGACAGCGCCATCTGTGATC +
Preference number: 5 (lower is better)
Translates to: VLVKLSQGHVPFLYQDMGTFPVL*TAPSVI
Trigger: GATCACAGATGGCGCTGTCAACAACACAGGGAAGGT...CCCCATGTCCTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GTACCGGCTCTTGCTCACGTCCACAGGCACGAAGGCTGTGTATTTGCTAATGATAAGGATTTGACCATCTaGGGTTGCAGCCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: VPALAHVHRHEGCVFANDKDLTI*GCSRSP
Trigger: GGGGGAGCGGCTGCAACCCAAGATGGTCAAATCCTT...ATCATTAGCAAATACACAGCCTTCGTGCCTGTGGACGTGAGCAAGAGCCGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp AAGGTGTGCTTGTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATACTGGCTGTGTGACCTaGGATAAGTGCCCTACCTCT +
Preference number: 5 (lower is better)
Translates to: KVCLLAKVMMMLLAERADTGCVT*DKCPTS
Trigger: AGAGGTAGGGCACTTATCCAAGGTCACACAGCCAGT...ATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAACAAGCACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CAA 90 bp GTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGCCGCGGGTGGCCTCGGTGTCTGCAGACATTTTaGGTTGTCATGATTGGGGAT +
Preference number: 5 (lower is better)
Translates to: VLLTAPSVITKRSRGWPRCLQTF*VVMIGD
Trigger: ATCCCCAATCATGACAACCAAAAATGTCTGCAGACA...CCGAGGCCACCCGCGGCTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS TCA 90 bp CAAGGAGGCCCCCAGCACCAACTCCCCTCTGGCTGTGCAATACCATaGGCTATTGTGGTCATCTGTACCCATACCATAAATGAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: QGGPQHQLPSGCAIP*AIVVICTHTINESL
Trigger: CAGGCTCTCATTTATGGTATGGGTACAGATGACCACAATAGCTCATGGTATTGCACAGCCAGAGGGGAGTTGGTGCTGGGGGCCTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 90 bp GATTTCTTGGTTGCTCCTGCTAGGCATCTTGTAGCACTAGTTCTATaGTGGCAGAGACCGGTTCACCTCAAGCCCTGGCCATTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: DFLVAPARHLVALVL*WQRPVHLKPWPLSR
Trigger: CCTGGACAATGGCCAGGGCTTGAGGTGAACCGGTCTCTGCCAGCATAGAACTAGTGCTACAAGATGCCTAGCAGGAGCAACCAAGAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 90 bp GCCCCCTCTAGGAAGTCCTGCTTTCATGTCCCCTTTAGAAGCCCGTaGTCTAAGGGCCACCCAATCACCAATAGCACCAACACTCTTATC +
Preference number: 5 (lower is better)
Translates to: APSRKSCFHVPFRSP*SKGHPITNSTNTLI
Trigger: GATAAGAGTGTTGGTGCTATTGGTGATTGGGTGGCCCTTAGAGCACGGGCTTCTAAAGGGGACATGAAAGCAGGACTTCCTAGAGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530722.5
ENST00000534075.1
CDS CCA 90 bp TGTCAGCAATTTCCTGAAGACTGGAAGTTCAGCTTGGCTCAGGGGTaGAGCTGGTTCTCCTGGGTTTTGGAGGCCAATGGGACCAAGAAG +
Preference number: 5 (lower is better)
Translates to: CQQFPEDWKFSLAQG*SWFSWVLEANGTKK
Trigger: CTTCTTGGTCCCATTGGCCTCCAAAACCCAGGAGAACCAGCTCCACCCCTGAGCCAAGCTGAACTTCCAGTCTTCAGGAAATTGCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS CCA 90 bp ACTTGCCTCCATGTCAGCAATTTCCTGAAGACTGGAAGTTCAGCTTaGCTCAGGGGTGGAGCTGGTTCTCCTGGGTTTTGGAGGCCAATG +
Preference number: 5 (lower is better)
Translates to: TCLHVSNFLKTGSSA*LRGGAGSPGFWRPM
Trigger: CATTGGCCTCCAAAACCCAGGAGAACCAGCTCCACCCCTGAGCCAAGCTGAACTTCCAGTCTTCAGGAAATTGCTGACATGGAGGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CAA 90 bp CTGAGCCAAGGTGGGCCCCTAAACTCTCTCCTCCCCCAGGTCTGCTATAAAGTCAGCTTGGCTTTGTCCTaGATCTGTACTGTCACGACA +
Preference number: 5 (lower is better)
Translates to: LSQGGPLNSLLPQVCYKVSLALS*ICTVTT
Trigger: TGTCGTGACAGTACAGATCAAGGACAAAGCCAAGCT...GACTTTATAGCAGACCTGGGGGAGGAGAGAGTTTAGGGGCCCACCTTGGCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CAA 90 bp CATGCTGATCCCGCTCATGCTGCTGCTCCTGTCAATGAGGAAGATGAACTCCCCATCTCCAGCTGGAAGTaGAACTCATACTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: HADPAHAAAPVNEEDELPISSWK*NSYSMG
Trigger: CCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGAT...GGGGAGTTCATCTTCCTCATTGACAGGAGCAGCAGCATGAGCGGGATCAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp AAGGTGTGCTTGTTGGCCAAGGTGATGATGATGCTCTTGGCCGAGCGGGCAGATGCCTTCTTCAAGGATTaGACCATCTTGGGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: KVCLLAKVMMMLLAERADAFFKD*TILGCS
Trigger: GCTGCAACCCAAGATGGTCAAATCCTTGAAGAAGGC...ATCTGCCCGCTCGGCCAAGAGCATCATCATCACCTTGGCCAACAAGCACACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCAAGGGGGACGTCCACTaGAGCTTCTCCATGGGGATG +
Preference number: 5 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLKGDVH*SFSMGM
Trigger: CATCCCCATGGAGAAGCTCAAGTGGACGTCCCCCTT...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp GTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACGACTGGAAGTTCAGCTaGGCTCAGGGGTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: VIAEHIELEILIPVPQKHDWKFS*AQGWSW
Trigger: CCAGCTCCACCCCTGAGCCAAGCTGAACTTCCAGTC...GTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CAA 90 bp CCTGAGAGTGCAGCATGCTGTACCGGCGCCTCTTGTCAGATCTGGGATTGGAGAAGGCATGAGAATTGCTaGAACCTAGGAGGTAGAGGT +
Preference number: 5 (lower is better)
Translates to: PESAACCTGASCQIWDWRRHENC*NLGGRG
Trigger: ACCTCTACCTCCTAGGTTCAAGCAATTCTCATGCCT...TCTCCAATCCCAGATCTGACAAGAGGCGCCGGTACAGCATGCTGCACTCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS TCA 90 bp AGTGAAACTATACCACATGTGTCACCACAGTCAGCGGCATTGAGATaGGGCGCATTGCGTTGGGACGTGGCTGTAAGCTCAAAACGGCTG +
Preference number: 5 (lower is better)
Translates to: SETIPHVSPQSAALR*GALRWDVAVSSKRL
Trigger: CAGCCGTTTTGAGCTTACAGCCACGTCCCAACGCAATGCGCCTCATCTCAATGCCGCTGACTGTGGTGACACATGTGGTATAGTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 90 bp CCCATAGCTCTTGGGTTATTTGCAACCAATGAAGATTTGTTCTTCTaGACCTTTGGGGCTGGGCAGGGGAGCCAGGGTTGCAGAGATCAG +
Preference number: 5 (lower is better)
Translates to: PIALGLFATNEDLFF*TFGAGQGSQGCRDQ
Trigger: CTGATCTCTGCAACCCTGGCTCCCCTGCCCAGCCCCAAAGGTGCAGAAGAACAAATCTTCATTGGTTGCAAATAACCCAAGAGCTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp GAAGACTGGAAGTTCAGCTTGGCTCAGGGGTGGAGCTGGTTCTCCTaGGTTTTGGAGGCCAATGGGACCAAGAAGTTGAGAGAACACTTT +
Preference number: 5 (lower is better)
Translates to: EDWKFSLAQGWSWFS*VLEANGTKKLREHF
Trigger: AAAGTGTTCTCTCAACTTCTTGGTCCCATTGGCCTCCAAAACCCAGGAGAACCAGCTCCACCCCTGAGCCAAGCTGAACTTCCAGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS-3UTR CAA 90 bp TCCCTTCAAGTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGCGGTCAAAGGTGTGCTaGTTGGCCAAGGTGATGATG +
Preference number: 5 (lower is better)
Translates to: SLQVLVKLSQGHVPFLYQRSKVC*LAKVMM
Trigger: CATCATCACCTTGGCCAACAAGCACACCTTTGACCG...CTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCACTTGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp TCATTTCCTGGTGCCGAATCTTCTCCAAGCATCGTCTGCGGCCTTCCAAAGCCAAGTCTGTGGCAGACGTaGGGTCCAATTCCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: SFPGAESSPSIVCGLPKPSLWQT*GPIPKL
Trigger: TAGCTTTGGAATTGGACCCAACGTCTGCCACAGACT...TGGCTTTGGAAGGCCGCAGACGATGCTTGGAGAAGATTCGGCACCAGGAAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCAGGTTCAGATCGTGCTaGGTGGTAGAGTCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLRFRSC*VVESPL
Trigger: CAGCGGAGACTCTACCACCAAGCACGATCTGAACCT...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS TCA 90 bp CACAAGGCAGCAATGGGATTTCATCTTAAGTATTCAAAAGGGCTGTaGGAATCCCTCGCGGGAGACTTGTGGCATAGATGGAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: HKAAMGFHLKYSKGL*ESLAGDLWHRWRGG
Trigger: CCCACCCCTCCATCTATGCCACAAGTCTCCCGCGAGGGATTCTCACAGCCCTTTTGAATACTTAAGATGAAATCCCATTGCTGCCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp GACTGCTGCTTAAATCTAACACGTCAACTCACAAGGTGTCTCCCCTaGTCCTGCCACCACCTCTTCTTAGTGAGGGAGCCACTAATGATC +
Preference number: 5 (lower is better)
Translates to: DCCLNLTRQLTRCLP*SCHHLFLVREPLMI
Trigger: GATCATTAGTGGCTCCCTCACTAAGAAGAGGTGGTGGCAGGACCAGGGGAGACACCTTGTGAGTTGACGTGTTAGATTTAAGCAGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS-3UTR CAA 90 bp TCCCTTCAAGTGCTGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAGCTCTCCAGCTTGGCTTaGTCCTTGATCTGTACTGTC +
Preference number: 5 (lower is better)
Translates to: SLQVLVKLSQGHVPFLYQLSSLA*SLICTV
Trigger: GACAGTACAGATCAAGGACAAAGCCAAGCTGGAGAG...CTGATAGAGAAAGGGGACATGACCCTGGGAGAGTTTGACCAGCACTTGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CTCCAGCACCTTCCCTGTGTTGTTGACAGCGCCATCTGTGATCACGAAGAGGAGTTGTCAGATCTGGGATaGGAGATGTGCAAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: LQHLPCVVDSAICDHEEELSDLG*EMCKEA
Trigger: TGCTTCTTTGCACATCTCCAATCCCAGATCTGACAA...CTCCTCTTCGTGATCACAGATGGCGCTGTCAACAACACAGGGAAGGTGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp GTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACAGGTTCAGATCGTGCTaGGTGGTAGAGTCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: VIAEHIELEILIPVPQKHRFRSC*VVESPL
Trigger: CAGCGGAGACTCTACCACCAAGCACGATCTGAACCT...GTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCAGAGAGCAGTGGGACTaGCCTCCATGTCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLREQWD*PPCHFL
Trigger: CAGGAAATGACATGGAGGCAAGTCCCACTGCTCTCT...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS TCA 90 bp TGCAATACCATGAGCTATTGTGGTCATCTGTACCCATACCATAAATaGGAGCCTGAAAGCTCAGGGGGCTGGCCGTTAGCGCAAAGGGTA +
Preference number: 5 (lower is better)
Translates to: CNTMSYCGHLYPYHK*EPESSGGWPLAQRV
Trigger: TACCCTTTGCGCTAACGGCCAGCCCCCTGAGCTTTCAGGCTCTCATTTATGGTATGGGTACAGATGACCACAATAGCTCATGGTATTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 90 bp TGCTTAAATCTAACACGTCAACTCACAAGGTGTCTCCCCTGGTCCTaGCACCACCTCTTCTTAGTGAGGGAGCCACTAATGATCTGCAAG +
Preference number: 5 (lower is better)
Translates to: CLNLTRQLTRCLPWS*HHLFLVREPLMICK
Trigger: CTTGCAGATCATTAGTGGCTCCCTCACTAAGAAGAGGTGGTGGCAGGACCAGGGGAGACACCTTGTGAGTTGACGTGTTAGATTTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 90 bp CCCCAGAGGGTAAGTCTGAAGCAGAGCCAGTCCACAAGGCAGCAATaGGATTTCATCTTAAGTATTCAAAAGGGCTGTGAGAATCCCTCG +
Preference number: 5 (lower is better)
Translates to: PQRVSLKQSQSTRQQ*DFILSIQKGCENPS
Trigger: CGAGGGATTCTCACAGCCCTTTTGAATACTTAAGATGAAATCCCATTGCTGCCTTGTGGACTGGCTCTGCTTCAGACTTACCCTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS-3UTR CAA 90 bp ATCTCCAGCTGGAAGTTGAACTCATACTCCATGGGGTTGGACACTTCGGTGTTCATCTCCAGCTGGAAGTaGAACTCATACTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: ISSWKLNSYSMGLDTSVFISSWK*NSYSMG
Trigger: CCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGAT...GAACACCGAAGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS-3UTR CAA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCCCAAACCCAATGATATaGAAGAGGCAGGCTGGCATG +
Preference number: 5 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLPNPMI*KRQAGM
Trigger: CATGCCAGCCTGCCTCTTCAATATCATTGGGTTTGG...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473325.5
ENST00000485375.6
CDS-3UTR CAA 90 bp CATGGAAGAAAGAGTATTTGTAGCCAGGCTGCGCTGGGGACCTTCAGAAGCACCTTGTCAGATCTGGGATaGGAGATGTGCAAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: HGRKSICSQAALGTFRSTLSDLG*EMCKEA
Trigger: TGCTTCTTTGCACATCTCCAATCCCAGATCTGACAA...GGTGCTTCTGAAGGTCCCCAGCGCAGCCTGGCTACAAATACTCTTTCTTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS TCA 90 bp TGGTGCGACCTACTTGGTGGTGGCTCCCTCGTGCCTCAGTACAAGTaGTGCAGTTCGCTTTACCCAATTCCTAAAAGTGGGAAAATTAAG +
Preference number: 5 (lower is better)
Translates to: WCDLLGGGSLVPQYK*CSSLYPIPKSGKIK
Trigger: CTTAATTTTCCCACTTTTAGGAATTGGGTAAAGCGAACTGCATCACTTGTACTGAGGCACGAGGGAGCCACCACCAAGTAGGTCGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS-3UTR CAA 90 bp TGGAGATGTGCAAAGAAGCATCACATACAATGCCATACCCCACCAGCCGTTCTCAGTAGCCTGGACTTGTaGAGATTTAGCCAGGATCCA +
Preference number: 5 (lower is better)
Translates to: WRCAKKHHIQCHTPPAVLSSLDL*RFSQDP
Trigger: TGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACT...GAGAACGGCTGGTGGGGTATGGCATTGTATGTGATGCTTCTTTGCACATCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS TCA 90 bp CCCCGTCACTCAACTACACATAATTCGGGTTATAGCAGAGCATATTaGACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACAAACAGCT +
Preference number: 5 (lower is better)
Translates to: PRHSTTHNSGYSRAY*TRDSHPSAAEAQTA
Trigger: AGCTGTTTGTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAACCCGAATTATGTGTAGTTGAGTGACGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 90 bp CAGGGCTTCCATGACATCTATGTAATTGGCTACCAGGCAAGCAGGTaGTGCATATCCCAAGAAGAAGAAAGTGTCATAGGCACTATGGGG +
Preference number: 5 (lower is better)
Translates to: QGFHDIYVIGYQASR*CISQEEESVIGTMG
Trigger: CCCCATAGTGCCTATGACACTTTCTTCTTCTTGGGATATGCATCACCTGCTTGCCTGGTAGCCAATTACATAGATGTCATGGAAGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS-3UTR CAA 90 bp AGAATTGCCCCCAAATATAAAATTATCGTGTCCATGGTGCTGAGGCTGAGAAACAGGTCGGGACAGAAGTaGAGCATGATGACGGAGTGG +
Preference number: 5 (lower is better)
Translates to: RIAPKYKIIVSMVLRLRNRSGQK*SMMTEW
Trigger: CCACTCCGTCATCATGCTCAACTTCTGTCCCGACCT...GTTTCTCAGCCTCAGCACCATGGACACGATAATTTTATATTTGGGGGCAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CAA 90 bp GTTATAGCAGAGCATATTGAACTCGAGATTCTCATCCCAGTGCCGCAGAAGCACAGTAGCCTGGACTTGTaGAGATTTAGCCAGGATCCA +
Preference number: 5 (lower is better)
Translates to: VIAEHIELEILIPVPQKHSSLDL*RFSQDP
Trigger: TGGATCCTGGCTAAATCTCAACAAGTCCAGGCTACT...GTGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467486.5
ENST00000485375.6
CDS-3UTR CAA 90 bp ATAAAGTCAAATGAAAGAGCACATGCAAATGTTCCTTGCCAACTGGGCAGTGTGAGTCTGTGGCAGACGTaGGGTCCAATTCCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: IKSNERAHANVPCQLGSVSLWQT*GPIPKL
Trigger: TAGCTTTGGAATTGGACCCAACGTCTGCCACAGACT...CACACTGCCCAGTTGGCAAGGAACATTTGCATGTGCTCTTTCATTTGACTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS-3UTR CAA 90 bp AGAATTGCCCCCAAATATAAAATTATCGTGTCCATGGTGCTGAGGCTGAGAAACCTACAGTGCACAGAATaGCCCCCAAATATAAAATTA +
Preference number: 5 (lower is better)
Translates to: RIAPKYKIIVSMVLRLRNLQCTE*PPNIKL
Trigger: TAATTTTATATTTGGGGGCAATTCTGTGCACTGTAG...GTTTCTCAGCCTCAGCACCATGGACACGATAATTTTATATTTGGGGGCAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS GCA 72 bp GCCTCCCCTGGCCAGAGCTGCCATCCCCAAAGGCACTaGAGCCAAGCCTCTCTCCCACAGCGTGGCATGGCT +
Preference number: 6 (lower is better)
Translates to: ASPGQSCHPQRH*SQASLPQRGMA
Trigger: AGCCATGCCACGCTGTGGGAGAGAGGCTTGGCTGCAGTGCCTTTGGGGATGGCAGCTCTGGCCAGGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp CTCTCCCACAGCGTGGCATGGCTCCAGAGGACCCCCTaGTCCCATGGTGCGACCTACTTGGTGGTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: LSHSVAWLQRTP*SHGATYLVVAP
Trigger: GGGAGCCACCACCAAGTAGGTCGCACCATGGGATCAGGGGGTCCTCTGGAGCCATGCCACGCTGTGGGAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp CGTGGCATGGCTCCAGAGGACCCCCTGATCCCATGGTaGGACCTACTTGGTGGTGGCTCCCTCGTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: RGMAPEDPLIPW*DLLGGGSLVPQ
Trigger: CTGAGGCACGAGGGAGCCACCACCAAGTAGGTCGCACCATGGGATCAGGGGGTCCTCTGGAGCCATGCCACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp GGTCCACGGTTGGGAGCTGTAGGCGTGGCCAGGAGCTaGTGCCAAGCCCCTGACCTTGGACAGATCTCTGCG +
Preference number: 6 (lower is better)
Translates to: GPRLGAVGVARS*CQAPDLGQISA
Trigger: CGCAGAGATCTGTCCAAGGTCAGGGGCTTGGCAGCAGCTCCTGGCCACGCCTACAGCTCCCAACCGTGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp GAGGGGCCTGAGACAGGGTTCTGCATCTGCATGTGGTaGGAGGTTGGGCCCTCGGGGCACTCTGTTGCAGGG +
Preference number: 6 (lower is better)
Translates to: EGPETGFCICMW*EVGPSGHSVAG
Trigger: CCCTGCAACAGAGTGCCCCGAGGGCCCAACCTCCCACCACATGCAGATGCAGAACCCTGTCTCAGGCCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp CCCACCTCATCGGGTAACCCGGGGAGGCAGTGCTGTTaGGAGGCTAAAGTCAACGGGCTGGGAGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: PTSSGNPGRQCC*EAKVNGLGAGL
Trigger: CAGCCCTGCTCCCAGCCCGTTGACTTTAGCCTCTCAACAGCACTGCCTCCCCGGGTTACCCGATGAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp TTGGGCCCTCGGGGCACTCTGTTGCAGGGACATTCCTaGTCCACCTGGACAAGGAGGCCCCCAGCACCAACT +
Preference number: 6 (lower is better)
Translates to: LGPRGTLLQGHS*STWTRRPPAPT
Trigger: AGTTGGTGCTGGGGGCCTCCTTGTCCAGGTGGAGCAGGAATGTCCCTGCAACAGAGTGCCCCGAGGGCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp CATGTGGTGGGAGGTTGGGCCCTCGGGGCACTCTGTTaGAGGGACATTCCTGCTCCACCTGGACAAGGAGGC +
Preference number: 6 (lower is better)
Translates to: HVVGGWALGALC*RDIPAPPGQGG
Trigger: GCCTCCTTGTCCAGGTGGAGCAGGAATGTCCCTGCAACAGAGTGCCCCGAGGGCCCAACCTCCCACCACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp CCACGGTTGGGAGCTGTAGGCGTGGCCAGGAGCTGCTaGCAAGCCCCTGACCTTGGACAGATCTCTGCGGAT +
Preference number: 6 (lower is better)
Translates to: PRLGAVGVARSC*QAPDLGQISAD
Trigger: ATCCGCAGAGATCTGTCCAAGGTCAGGGGCTTGGCAGCAGCTCCTGGCCACGCCTACAGCTCCCAACCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp CCAAAGGCACTGCAGCCAAGCCTCTCTCCCACAGCGTaGCATGGCTCCAGAGGACCCCCTGATCCCATGGTG +
Preference number: 6 (lower is better)
Translates to: PKALQPSLSPTA*HGSRGPPDPMV
Trigger: CACCATGGGATCAGGGGGTCCTCTGGAGCCATGCCACGCTGTGGGAGAGAGGCTTGGCTGCAGTGCCTTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp GCTGAGGGGCCTGAGACAGGGTTCTGCATCTGCATGTaGTGGGAGGTTGGGCCCTCGGGGCACTCTGTTGCA +
Preference number: 6 (lower is better)
Translates to: AEGPETGFCICM*WEVGPSGHSVA
Trigger: TGCAACAGAGTGCCCCGAGGGCCCAACCTCCCACCACATGCAGATGCAGAACCCTGTCTCAGGCCCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp TACGCAGGGCAGCAGAGTTGGGGTACTCCACCACGGTaGGCAGGTACCGGCTCTTGCTCACGTCCACAGGCA +
Preference number: 6 (lower is better)
Translates to: YAGQQSWGTPPR*AGTGSCSRPQA
Trigger: TGCCTGTGGACGTGAGCAAGAGCCGGTACCTGCCCACCGTGGTGGAGTACCCCAACTCTGCTGCCCTGCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375079.6
CDS CAA 72 bp GCATGTGGTGGGAGGTTGGGCCCTCGGGGCACTCTGTaGCAGGGACATTCCTGCTCCACCTGGACAAGGAGG +
Preference number: 6 (lower is better)
Translates to: ACGGRLGPRGTL*QGHSCSTWTRR
Trigger: CCTCCTTGTCCAGGTGGAGCAGGAATGTCCCTGCAACAGAGTGCCCCGAGGGCCCAACCTCCCACCACATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp TCTGCATCTGCATGTGGTGGGAGGTTGGGCCCTCGGGGCACTCTGTaGCAGGGACATTCCTGCTCCACCTGGACAAGGAGGCCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: SASACGGRLGPRGTL*QGHSCSTWTRRPPA
Trigger: TGCTGGGGGCCTCCTTGTCCAGGTGGAGCAGGAATGTCCCTGCAACAGAGTGCCCCGAGGGCCCAACCTCCCACCACATGCAGATGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp CTGAGGGGCCTGAGACAGGGTTCTGCATCTGCATGTGGTGGGAGGTaGGGCCCTCGGGGCACTCTGTTGCAGGGACATTCCTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: LRGLRQGSASACGGR*GPRGTLLQGHSCST
Trigger: GGTGGAGCAGGAATGTCCCTGCAACAGAGTGCCCCGAGGGCCCAACCTCCCACCACATGCAGATGCAGAACCCTGTCTCAGGCCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp GAGCGGGCAGATGGGGCGGCGTCGGCACGAATCTCATaGGTGGGACTCTCCACCCCTGAGTGGCATAGAAAG +
Preference number: 6 (lower is better)
Translates to: ERADGAASARIS*VGLSTPEWHRK
Trigger: CTTTCTATGCCACTCAGGGGTGGAGAGTCCCACTCATGAGATTCGTGCCGACGCCGCCCCATCTGCCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS GCA 72 bp CCTGGGGTTGTGATGGCCACAGTGTCCAGGCCTGCCTaGCTGGGTTCCTCCCCAGAGGGTAAGTCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: PGVVMATVSRPA*LGSSPEGKSEA
Trigger: TGCTTCAGACTTACCCTCTGGGGAGGAACCCAGGCAGGCAGGCCTGGACACTGTGGCCATCACAACCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp CGGGGCTTGCGCCAGAGCCCGCAGGACCCCACGAGTTaGTTTGATAAGCTAAGCTTCCAAGGCCTTCCCACG +
Preference number: 6 (lower is better)
Translates to: RGLRQSPQDPTS*FDKLSFQGLPT
Trigger: CGTGGGAAGGCCTTGGAAGCTTAGCTTATCAAACCAACTCGTGGGGTCCTGCGGGCTCTGGCGCAAGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp TTGAGCCAACACCCCAGATTGGCATCCTGCCCCACCTaGGGTTGTGATGGCCACAGTGTCCAGGCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: LSQHPRLASCPT*GCDGHSVQACL
Trigger: CAGGCAGGCCTGGACACTGTGGCCATCACAACCCCAGGTGGGGCAGGATGCCAATCTGGGGTGTTGGCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp CGCTGCCCTGGCAGCTGGCTTGATCAATGCCCACATTaGGATAGCTGTTTAGGTGGCCTGCAGGAGGCCGAG +
Preference number: 6 (lower is better)
Translates to: RCPGSWLDQCPH*DSCLGGLQEAE
Trigger: CTCGGCCTCCTGCAGGCCACCTAAACAGCTATCGCAATGTGGGCATTGATCAAGCCAGCTGCCAGGGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp GTCTGCCAAAGGATGGGGCCCAGTTATCCTGGCATCTaGAGTTGGTCTCGAGCTGAGGGGCCTGAGACAGGG +
Preference number: 6 (lower is better)
Translates to: VCQRMGPSYPGI*SWSRAEGPETG
Trigger: CCCTGTCTCAGGCCCCTCAGCTCGAGACCAACTCCAGATGCCAGGATAACTGGGCCCCATCCTTTGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp GGGCAGATGGGGCGGCGTCGGCACGAATCTCATGAGTaGGACTCTCCACCCCTGAGTGGCATAGAAAGGCAA +
Preference number: 6 (lower is better)
Translates to: GQMGRRRHESHE*DSPPLSGIERQ
Trigger: TTGCCTTTCTATGCCACTCAGGGGTGGAGAGTCCCACTCATGAGATTCGTGCCGACGCCGCCCCATCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS CAA 72 bp CTGAGACAGGGTTCTGCATCTGCATGTGGTGGGAGGTaGGGCCCTCGGGGCACTCTGTTGCAGGGACATTCC +
Preference number: 6 (lower is better)
Translates to: LRQGSASACGGR*GPRGTLLQGHS
Trigger: GGAATGTCCCTGCAACAGAGTGCCCCGAGGGCCCAACCTCCCACCACATGCAGATGCAGAACCCTGTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp CCTGGCCTGATCCCTCCTAGATGCTTCTCCATAGAGTaGGGGTCCCCTACCTGTGTGGGCTCAGCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: PGLIPPRCFSIE*GSPTCVGSARP
Trigger: AGGCCTGGCTGAGCCCACACAGGTAGGGGACCCCAACTCTATGGAGAAGCATCTAGGAGGGATCAGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530722.5
CDS TCA 72 bp TGTTGCAGAGCTCCAGTGGCCGGTGCGGGAGCAGTCTaGGGAACTTTCCTAGAGAAGTGGGTGGCATGCCCA +
Preference number: 6 (lower is better)
Translates to: CCRAPVAGAGAV*GTFLEKWVACP
Trigger: TGGGCATGCCACCCACTTCTCTAGGAAAGTTCCTCAGACTGCTCCCGCACCGGCCACTGGAGCTCTGCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp AGGGCACGGGTAGCATGCCATAGGCACTTGAGGCTCTaGTGGGGACAAGCACCAGCCATGCCACTTGAGCCA +
Preference number: 6 (lower is better)
Translates to: RARVACHRHLRL*WGQAPAMPLEP
Trigger: TGGCTCAAGTGGCATGGCTGGTGCTTGTCCCCATCAGAGCCTCAAGTGCCTATGGCATGCTACCCGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp GCACTGACTTTGAGCCAACACCCCAGATTGGCATCCTaGCCCACCTGGGGTTGTGATGGCCACAGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: ALTLSQHPRLAS*PTWGCDGHSVQ
Trigger: CTGGACACTGTGGCCATCACAACCCCAGGTGGGGCAGGATGCCAATCTGGGGTGTTGGCTCAAAGTCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp GGACCCCCTGATCCCATGGTGCGACCTACTTGGTGGTaGCTCCCTCGTGCCTCAGTACAAGTGATGCAGTTC +
Preference number: 6 (lower is better)
Translates to: GPPDPMVRPTWW*LPRASVQVMQF
Trigger: GAACTGCATCACTTGTACTGAGGCACGAGGGAGCCACCACCAAGTAGGTCGCACCATGGGATCAGGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp AGAGGACCCCCTGATCCCATGGTGCGACCTACTTGGTaGTGGCTCCCTCGTGCCTCAGTACAAGTGATGCAG +
Preference number: 6 (lower is better)
Translates to: RGPPDPMVRPTW*WLPRASVQVMQ
Trigger: CTGCATCACTTGTACTGAGGCACGAGGGAGCCACCACCAAGTAGGTCGCACCATGGGATCAGGGGGTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp TCCAGAGGACCCCCTGATCCCATGGTGCGACCTACTTaGTGGTGGCTCCCTCGTGCCTCAGTACAAGTGATG +
Preference number: 6 (lower is better)
Translates to: SRGPPDPMVRPT*WWLPRASVQVM
Trigger: CATCACTTGTACTGAGGCACGAGGGAGCCACCACCAAGTAGGTCGCACCATGGGATCAGGGGGTCCTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp GTTCTATGCTGGCAGAGACCGGTTCACCTCAAGCCCTaGCCATTGTCCAGGCTGAGGCCTGGAGACCCAGAA +
Preference number: 6 (lower is better)
Translates to: VLCWQRPVHLKP*PLSRLRPGDPE
Trigger: TTCTGGGTCTCCAGGCCTCAGCCTGGACAATGGCCAGGGCTTGAGGTGAACCGGTCTCTGCCAGCATAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp CAAAGGATGGGGCCCAGTTATCCTGGCATCTGGAGTTaGTCTCGAGCTGAGGGGCCTGAGACAGGGTTCTGC +
Preference number: 6 (lower is better)
Translates to: QRMGPSYPGIWS*SRAEGPETGFC
Trigger: GCAGAACCCTGTCTCAGGCCCCTCAGCTCGAGACCAACTCCAGATGCCAGGATAACTGGGCCCCATCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp TCCAGATGCCAAGGCAATGAGCACATGCCCCATTCATaGGGCGGCAGTACCCTTCCCTCTCCTTTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: SRCQGNEHMPHS*GGSTLPSPFPG
Trigger: CCCTGGGAAAGGAGAGGGAAGGGTACTGCCGCCCCATGAATGGGGCATGTGCTCATTGCCTTGGCATCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp CGTCCAAGGTCACCTGTGACTGTTGGGGATCGAACATaGGAGGCATCGAAGTGGCCGCTCTCCAGCTTGGCT +
Preference number: 6 (lower is better)
Translates to: RPRSPVTVGDRT*EASKWPLSSLA
Trigger: AGCCAAGCTGGAGAGCGGCCACTTCGATGCCTCCCATGTTCGATCCCCAACAGTCACAGGTGACCTTGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485375.6
CDS CAA 90 bp AACCCTCATCCTGGCCTGATCCCTCCTAGATGCTTCTCCATAGAGTaGGGGTCCCCTACCTGTGTGGGCTCAGCCAGGCCTGGGCTAGAT +
Preference number: 6 (lower is better)
Translates to: NPHPGLIPPRCFSIE*GSPTCVGSARPGLD
Trigger: ATCTAGCCCAGGCCTGGCTGAGCCCACACAGGTAGGGGACCCCAACTCTATGGAGAAGCATCTAGGAGGGATCAGGCCAGGATGAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530722.5
CDS CAA 90 bp ACATGTGTCACCACAGTCAGCGGCATTGAGATGAGGCGCATTGCGTaGGGACGTGGCTGTAAGCTCAAAACGGCTGGCCCTGAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: TCVTTVSGIEMRRIA*GRGCKLKTAGPEPR
Trigger: CCTTGGCTCAGGGCCAGCCGTTTTGAGCTTACAGCCACGTCCCAACGCAATGCGCCTCATCTCAATGCCGCTGACTGTGGTGACACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp GCAGCAGAGTTGGGGTACTCCACCACGGTGGGCAGGTACCGGCTCTaGCTCACGTCCACAGGCACGAAGGCTGTGTATTTGCTAATGATG +
Preference number: 6 (lower is better)
Translates to: AAELGYSTTVGRYRL*LTSTGTKAVYLLMM
Trigger: CATCATTAGCAAATACACAGCCTTCGTGCCTGTGGACGTGAGCAAGAGCCGGTACCTGCCCACCGTGGTGGAGTACCCCAACTCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375079.6
CDS GCA 72 bp CCATTTCCTGGTGCCGAATCTTCTCCAAGCATCGTCTaGGGCCTTCCAAAGCCAGAAGAGGTGCCCCTCCAC +
Preference number: 6 (lower is better)
Translates to: PFPGAESSPSIV*GLPKPEEVPLH
Trigger: GTGGAGGGGCACCTCTTCTGGCTTTGGAAGGCCGCAGACGATGCTTGGAGAAGATTCGGCACCAGGAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375079.6
ENST00000467486.5
ENST00000525343.1
CDS CCA 72 bp GTGGGGCAGGGAGGTGCTGGACAGCCCAGTTCAGCCTaGTTATGTAGAGGAAGAAAGAGGCCCAGAACACAC +
Preference number: 6 (lower is better)
Translates to: VGQGGAGQPSSA*LCRGRKRPRTH
Trigger: GTGTGTTCTGGGCCTCTTTCTTCCTCTACATAACCAGGCTGAACTGGGCTGTCCAGCACCTCCCTGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp AGAGAAGGGACTGGCTGGGGAAACATGGGTGCCGGCTaGAAACCGAGGCCGCTTATGGACAAGTCCAGTGTA +
Preference number: 6 (lower is better)
Translates to: REGTGWGNMGAG*KPRPLMDKSSV
Trigger: TACACTGGACTTGTCCATAAGCGGCCTCGGTTTCCAGCCGGCACCCATGTTTCCCCAGCCAGTCCCTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp TGGGAGGCATCGAAGTGGCCGCTCTCCAGCTTGGCTTaGTCCTTGATCTGTACTGTCACGACACGGTCGGCA +
Preference number: 6 (lower is better)
Translates to: WEASKWPLSSLA*SLICTVTTRSA
Trigger: TGCCGACCGTGTCGTGACAGTACAGATCAAGGACAAAGCCAAGCTGGAGAGCGGCCACTTCGATGCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000485375.6
ENST00000534075.1
CDS CAA 72 bp AACCCAAAGCTCTTACCCGCCTTGGTGGCACTGACTTaGAGCCAACACCCCAGATTGGCATCCTGCCCCACC +
Preference number: 6 (lower is better)
Translates to: NPKLLPALVALT*SQHPRLASCPT
Trigger: GGTGGGGCAGGATGCCAATCTGGGGTGTTGGCTCAAAGTCAGTGCCACCAAGGCGGGTAAGAGCTTTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp ACCACAGTCAGCGGCATTGAGATGAGGCGCATTGCGTaGGGACGTGGCTGTAAGCTCAAAACGGCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: TTVSGIEMRRIA*GRGCKLKTAGP
Trigger: AGGGCCAGCCGTTTTGAGCTTACAGCCACGTCCCAACGCAATGCGCCTCATCTCAATGCCGCTGACTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp GATCGAACATGGGAGGCATCGAAGTGGCCGCTCTCCAGCTTGGCTTaGTCCTTGATCTGTACTGTCACGACACGGTCGGCAATGACTGCC +
Preference number: 6 (lower is better)
Translates to: DRTWEASKWPLSSLA*SLICTVTTRSAMTA
Trigger: GGCAGTCATTGCCGACCGTGTCGTGACAGTACAGATCAAGGACAAAGCCAAGCTGGAGAGCGGCCACTTCGATGCCTCCCATGTTCGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000485375.6
ENST00000534075.1
CDS CAA 90 bp GTTGGGGATCGAACATGGGAGGCATCGAAGTGGCCGCTCTCCAGCTaGGCTTTGTCCTTGATCTGTACTGTCACGACACGGTCGGCAATG +
Preference number: 6 (lower is better)
Translates to: VGDRTWEASKWPLSS*ALSLICTVTTRSAM
Trigger: CATTGCCGACCGTGTCGTGACAGTACAGATCAAGGACAAAGCCAAGCTGGAGAGCGGCCACTTCGATGCCTCCCATGTTCGATCCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000485375.6
ENST00000534075.1
CDS CAA 90 bp CTGATGAAGATGGTGACATTCTCCATGGGGGCAATGGTCCCCAGGTaGGCCACGAACAGGATCCGCTCCAAATCCTCGTCCAAGGTCACC +
Preference number: 6 (lower is better)
Translates to: LMKMVTFSMGAMVPR*ATNRIRSKSSSKVT
Trigger: GGTGACCTTGGACGAGGATTTGGAGCGGATCCTGTTCGTGGCCAACCTGGGGACCATTGCCCCCATGGAGAATGTCACCATCTTCATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000485375.6
CDS CAA 90 bp TCCCCACCTGCGAGCAGACATGGCCCACGGATCTCCAGCTGGAAGTaGAACTCATACTCCATGGGGTTGGACACTTCGGTGTTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: SPPASRHGPRISSWK*NSYSMGLDTSVFRR
Trigger: TCTCCTGAACACCGAAGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS TCA 72 bp CCACAGCAAGTGGCAGTGAGTGGCAGCTCAGGTCAGTaGAGGCTAGGGGATGCCATTCATTTTGCCCGCAGA +
Preference number: 6 (lower is better)
Translates to: PQQVAVSGSSGQ*RLGDAIHFARR
Trigger: TCTGCGGGCAAAATGAATGGCATCCCCTAGCCTTCACTGACCTGAGCTGCCACTCACTGCCACTTGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp GCTCCAAATCCTCGTCCAAGGTCACCTTTCCCGGTGTaGAGGAATGAGGGGCTATGGAAACCCCGTCTTGCA +
Preference number: 6 (lower is better)
Translates to: APNPRPRSPFPV*RNEGLWKPRLA
Trigger: TGCAAGACGGGGTTTCCATAGCCCCTCATTCCTGCACACCGGGAAAGGTGACCTTGGACGAGGATTTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000534075.1
CDS GCA 72 bp TGGGCCTCAAACATGTTGCAGAGCTCCAGTGGCCGGTaGGGGAGCAGTCTGAGGAACTTTCCTAGAGAAGTG +
Preference number: 6 (lower is better)
Translates to: WASNMLQSSSGR*GSSLRNFPREV
Trigger: CACTTCTCTAGGAAAGTTCCTCAGACTGCTCCCGCACCGGCCACTGGAGCTCTGCAACATGTTTGAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp AGTGAGTGGCAGCTCAGGTCAGTGAAGGCTAGGGGATaGCATTCATTTTGCCCGCAGAGAAGGGACTGGCTG +
Preference number: 6 (lower is better)
Translates to: SEWQLRSVKARG*HSFCPQRRDWL
Trigger: CAGCCAGTCCCTTCTCTGCGGGCAAAATGAATGGCATCCCCTAGCCTTCACTGACCTGAGCTGCCACTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp TGCAGAATGTTCCCTGTGACTGTTGGGGATCGAACATaGGAGGCATCGAAGTGGCCGCTCTCCAGCTTGGCT +
Preference number: 6 (lower is better)
Translates to: CRMFPVTVGDRT*EASKWPLSSLA
Trigger: AGCCAAGCTGGAGAGCGGCCACTTCGATGCCTCCCATGTTCGATCCCCAACAGTCACAGGGAACATTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000534075.1
CDS CCA 72 bp GAAGACTGGAAGTTCAGCTTGGCTCAGGGGTGGAGCTaGTTCTCCTGGGTTTTGGAGGCCAATGGGACCAAG +
Preference number: 6 (lower is better)
Translates to: EDWKFSLAQGWS*FSWVLEANGTK
Trigger: CTTGGTCCCATTGGCCTCCAAAACCCAGGAGAACCAGCTCCACCCCTGAGCCAAGCTGAACTTCCAGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS CCA 72 bp CCACCTGCGAGCAGACATGGCCCACGGATCTCCAGCTaGAAGTTGAACTCATACTCCATGGGGTTGGACACT +
Preference number: 6 (lower is better)
Translates to: PPASRHGPRISS*KLNSYSMGLDT
Trigger: AGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGGGCCATGTCTGCTCGCAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS CCA 72 bp TATAGGCTCATGAGGTCAGGAGAGAGAGGAGTTCGCTaGGGCACACCGAGATCCAGGCCAGAGATGAGTGAC +
Preference number: 6 (lower is better)
Translates to: YRLMRSGERGVR*GTPRSRPEMSD
Trigger: GTCACTCATCTCTGGCCTGGATCTCGGTGTGCCCCAGCGAACTCCTCTCTCTCCTGACCTCATGAGCCTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473325.5
CDS CAA 90 bp AGCCAGGGTTGCAGAGATCAGCAGTTTTCTTGGGCCTCAAACATGTaGCAGAGCTCCAGTGGCCGGTGCGGGAGCAGTCTGAGGAACTTT +
Preference number: 6 (lower is better)
Translates to: SQGCRDQQFSWASNM*QSSSGRCGSSLRNF
Trigger: AAAGTTCCTCAGACTGCTCCCGCACCGGCCACTGGAGCTCTGCAACATGTTTGAGGCCCAAGAAAACTGCTGATCTCTGCAACCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp TCCTCGTCCAAGGTCACCTTTCCCGGTGTGCAGGAATaGGGGGCTATGGAAACCCCGTCTTGCAGAATGTTC +
Preference number: 6 (lower is better)
Translates to: SSSKVTFPGVQE*GAMETPSCRMF
Trigger: GAACATTCTGCAAGACGGGGTTTCCATAGCCCCTCATTCCTGCACACCGGGAAAGGTGACCTTGGACGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000534075.1
CDS GCA 72 bp CTTGATCTGTACTGTCACGACACGGTCGGCAATGACTaGCTCAAAGCCGATCACCGTGGTGCACTCATCCAG +
Preference number: 6 (lower is better)
Translates to: LDLYCHDTVGND*LKADHRGALIQ
Trigger: CTGGATGAGTGCACCACGGTGATCGGCTTTGAGGCAGTCATTGCCGACCGTGTCGTGACAGTACAGATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000485375.6
ENST00000530722.5
ENST00000534075.1
CDS GCA 72 bp TCCCATGGTGCGACCTACTTGGTGGTGGCTCCCTCGTaGCTCAGTACAAGTGATGCAGTTCGCTTTACCCAA +
Preference number: 6 (lower is better)
Translates to: SHGATYLVVAPS*LSTSDAVRFTQ
Trigger: TTGGGTAAAGCGAACTGCATCACTTGTACTGAGGCACGAGGGAGCCACCACCAAGTAGGTCGCACCATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp GTTGCTCCTGCTAGGCATCTTGTAGCACTAGTTCTATaGTGGCAGAGACCGGTTCACCTCAAGCCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: VAPARHLVALVL*WQRPVHLKPWP
Trigger: TGGCCAGGGCTTGAGGTGAACCGGTCTCTGCCAGCATAGAACTAGTGCTACAAGATGCCTAGCAGGAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp ATGTGCATTTGGGCATTTGGACCCCTGAATGATAGGTaGTGGGGTGTCACACAGGATCCAGCCAGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: MCIWAFGPLNDR*WGVTQDPARQV
Trigger: GACCTGCCTGGCTGGATCCTGTGTGACACCCCAGCACCTATCATTCAGGGGTCCAAATGCCCAAATGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp GAGATGACAAAGCTCCGCTCACATCTCCTGGAAGCCTaGAGCAAGACAACCCAAAGCTCTTACCCGCCTTGG +
Preference number: 6 (lower is better)
Translates to: EMTKLRSHLLEA*SKTTQSSYPPW
Trigger: CCAAGGCGGGTAAGAGCTTTGGGTTGTCTTGCTCCAGGCTTCCAGGAGATGTGAGCGGAGCTTTGTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp GCTCCTGCTAGGCATCTTGTAGCACTAGTTCTATGCTaGCAGAGACCGGTTCACCTCAAGCCCTGGCCATTG +
Preference number: 6 (lower is better)
Translates to: APARHLVALVLC*QRPVHLKPWPL
Trigger: CAATGGCCAGGGCTTGAGGTGAACCGGTCTCTGCCAGCATAGAACTAGTGCTACAAGATGCCTAGCAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp GGCCCACGGATCTCCAGCTGGAAGTTGAACTCATACTCCATGGGGTaGGACACTTCGGTGTTCAGGAGAGTCGCCAGGCACAACTTATTC +
Preference number: 6 (lower is better)
Translates to: GPRISSWKLNSYSMG*DTSVFRRVARHNLF
Trigger: GAATAAGTTGTGCCTGGCGACTCTCCTGAACACCGAAGTGTCCAACCCCATGGAGTATGAGTTCAACTTCCAGCTGGAGATCCGTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000485375.6
CDS TCA 72 bp ATACCACATGTGTCACCACAGTCAGCGGCATTGAGATaGGGCGCATTGCGTTGGGACGTGGCTGTAAGCTCA +
Preference number: 6 (lower is better)
Translates to: IPHVSPQSAALR*GALRWDVAVSS
Trigger: TGAGCTTACAGCCACGTCCCAACGCAATGCGCCTCATCTCAATGCCGCTGACTGTGGTGACACATGTGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp CTAACACGTCAACTCACAAGGTGTCTCCCCTGGTCCTaGCACCACCTCTTCTTAGTGAGGGAGCCACTAATG +
Preference number: 6 (lower is better)
Translates to: LTRQLTRCLPWS*HHLFLVREPLM
Trigger: CATTAGTGGCTCCCTCACTAAGAAGAGGTGGTGGCAGGACCAGGGGAGACACCTTGTGAGTTGACGTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp GAACAAAATCTTCCAGATGCCAAGGCAATGAGCACATaGCCCATTCATGGGGCGGCAGTACCCTTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: EQNLPDAKAMST*PIHGAAVPFPL
Trigger: GAGAGGGAAGGGTACTGCCGCCCCATGAATGGGGCATGTGCTCATTGCCTTGGCATCTGGAAGATTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp AGCCTTCAGAACCTTACCCCAGAAGCAACACGTGTCTaGGTACACACTCTGTCTCTCCACTGCCACAGTGAC +
Preference number: 6 (lower is better)
Translates to: SLQNLTPEATRV*VHTLSLHCHSD
Trigger: GTCACTGTGGCAGTGGAGAGACAGAGTGTGTACCCAGACACGTGTTGCTTCTGGGGTAAGGTTCTGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289815.13
ENST00000375079.6
ENST00000473325.5
ENST00000485375.6
CDS CCA 72 bp TGCATTTGGGCATTTGGACCCCTGAATGATAGGTGCTaGGGTGTCACACAGGATCCAGCCAGGCAGGTCAAT +
Preference number: 6 (lower is better)
Translates to: CIWAFGPLNDRC*GVTQDPARQVN
Trigger: ATTGACCTGCCTGGCTGGATCCTGTGTGACACCCCAGCACCTATCATTCAGGGGTCCAAATGCCCAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp AAGTTCAGCTTGGCTCAGGGGTGGAGCTGGTTCTCCTaGGTTTTGGAGGCCAATGGGACCAAGAAGTTGAGA +
Preference number: 6 (lower is better)
Translates to: KFSLAQGWSWFS*VLEANGTKKLR
Trigger: TCTCAACTTCTTGGTCCCATTGGCCTCCAAAACCCAGGAGAACCAGCTCCACCCCTGAGCCAAGCTGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS CCA 72 bp TGGGACTTGCCTCCATGTCAGCAATTTCCTGAAGACTaGAAGTTCAGCTTGGCTCAGGGGTGGAGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: WDLPPCQQFPED*KFSLAQGWSWF
Trigger: GAACCAGCTCCACCCCTGAGCCAAGCTGAACTTCCAGTCTTCAGGAAATTGCTGACATGGAGGCAAGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS CAA 90 bp GACTTGCCTCCATGTCAGCAATTTCCTGAAGACTGGAAGTTCAGCTaGGCTCAGGGGTGGAGCTGGTTCTCCTGGGTTTTGGAGGCCAAT +
Preference number: 6 (lower is better)
Translates to: DLPPCQQFPEDWKFS*AQGWSWFSWVLEAN
Trigger: ATTGGCCTCCAAAACCCAGGAGAACCAGCTCCACCCCTGAGCCAAGCTGAACTTCCAGTCTTCAGGAAATTGCTGACATGGAGGCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS GCA 72 bp CACCTCGTATGTTCACTGTGGTACCCCAGTATGCCATaGCTGGCATACAGTAGGCACCCAGTAAAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: HLVCSLWYPSMP*LAYSRHPVKAF
Trigger: GAAAGCCTTTACTGGGTGCCTACTGTATGCCAGGCATGGCATACTGGGGTACCACAGTGAACATACGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp GCTAAGCTTCCAAGGCCTTCCCACGAGGGAAGTCTGTaGAGCTTCACTCCAAGGTTGGGACAGGAATTTGAT +
Preference number: 6 (lower is better)
Translates to: AKLPRPSHEGSL*SFTPRLGQEFD
Trigger: ATCAAATTCCTGTCCCAACCTTGGAGTGAAGCTCCACAGACTTCCCTCGTGGGAAGGCCTTGGAAGCTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp ACACAGCACACTAGTGGTGGAGTTGGGACCCATGCTTaGGTTCCTCAACTCTCAGCTCAGTGTTTTTCCCAC +
Preference number: 6 (lower is better)
Translates to: TQHTSGGVGTHA*VPQLSAQCFSH
Trigger: GTGGGAAAAACACTGAGCTGAGAGTTGAGGAACCCAAGCATGGGTCCCAACTCCACCACTAGTGTGCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp CAAAAAGGACAGGGACAGCACCTCGTATGTTCACTGTaGTACCCCAGTATGCCATGCCTGGCATACAGTAGG +
Preference number: 6 (lower is better)
Translates to: QKGQGQHLVCSL*YPSMPCLAYSR
Trigger: CCTACTGTATGCCAGGCATGGCATACTGGGGTACCACAGTGAACATACGAGGTGCTGTCCCTGTCCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp GCTTATGGACAAGTCCAGTGTAAGTCTGCCAAAGGATaGGGCCCAGTTATCCTGGCATCTGGAGTTGGTCTC +
Preference number: 6 (lower is better)
Translates to: AYGQVQCKSAKG*GPVILASGVGL
Trigger: GAGACCAACTCCAGATGCCAGGATAACTGGGCCCCATCCTTTGGCAGACTTACACTGGACTTGTCCATAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CCA 72 bp CATGTCAGCAATTTCCTGAAGACTGGAAGTTCAGCTTaGCTCAGGGGTGGAGCTGGTTCTCCTGGGTTTTGG +
Preference number: 6 (lower is better)
Translates to: HVSNFLKTGSSA*LRGGAGSPGFW
Trigger: CCAAAACCCAGGAGAACCAGCTCCACCCCTGAGCCAAGCTGAACTTCCAGTCTTCAGGAAATTGCTGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS CAA 72 bp GAAGTGGGTGGCATGCCCACCACCTTGCTGGATTTCTaGGTTGCTCCTGCTAGGCATCTTGTAGCACTAGTT +
Preference number: 6 (lower is better)
Translates to: EVGGMPTTLLDF*VAPARHLVALV
Trigger: AACTAGTGCTACAAGATGCCTAGCAGGAGCAACCAAGAAATCCAGCAAGGTGGTGGGCATGCCACCCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp AACTCTCAGCTCAGTGTTTTTCCCACTGAAGGCAGCTaGGAGGCTGGGCTTTGTCTTACGGTGGCATTAGCC +
Preference number: 6 (lower is better)
Translates to: NSQLSVFPTEGS*EAGLCLTVALA
Trigger: GGCTAATGCCACCGTAAGACAAAGCCCAGCCTCCAAGCTGCCTTCAGTGGGAAAAACACTGAGCTGAGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp ATTTGCCAGAAGTCACACAGCACACTAGTGGTGGAGTaGGGACCCATGCTTGGGTTCCTCAACTCTCAGCTC +
Preference number: 6 (lower is better)
Translates to: ICQKSHSTLVVE*GPMLGFLNSQL
Trigger: GAGCTGAGAGTTGAGGAACCCAAGCATGGGTCCCAACTCCACCACTAGTGTGCTGTGTGACTTCTGGCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp CCATGTCAGCAATTTCCTGAAGACTGGAAGTTCAGCTaGGCTCAGGGGTGGAGCTGGTTCTCCTGGGTTTTG +
Preference number: 6 (lower is better)
Translates to: PCQQFPEDWKFS*AQGWSWFSWVL
Trigger: CAAAACCCAGGAGAACCAGCTCCACCCCTGAGCCAAGCTGAACTTCCAGTCTTCAGGAAATTGCTGACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS CAA 90 bp GGGTTCCTCAACTCTCAGCTCAGTGTTTTTCCCACTGAAGGCAGCTaGGAGGCTGGGCTTTGTCTTACGGTGGCATTAGCCCTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GFLNSQLSVFPTEGS*EAGLCLTVALALSS
Trigger: TGAAGAAAGGGCTAATGCCACCGTAAGACAAAGCCCAGCCTCCAAGCTGCCTTCAGTGGGAAAAACACTGAGCTGAGAGTTGAGGAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp TTTCCTAGAGAAGTGGGTGGCATGCCCACCACCTTGCTGGATTTCTaGGTTGCTCCTGCTAGGCATCTTGTAGCACTAGTTCTATGCTGG +
Preference number: 6 (lower is better)
Translates to: FPREVGGMPTTLLDF*VAPARHLVALVLCW
Trigger: CCAGCATAGAACTAGTGCTACAAGATGCCTAGCAGGAGCAACCAAGAAATCCAGCAAGGTGGTGGGCATGCCACCCACTTCTCTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp AGTCTGAGGAACTTTCCTAGAGAAGTGGGTGGCATGCCCACCACCTaGCTGGATTTCTTGGTTGCTCCTGCTAGGCATCTTGTAGCACTA +
Preference number: 6 (lower is better)
Translates to: SLRNFPREVGGMPTT*LDFLVAPARHLVAL
Trigger: TAGTGCTACAAGATGCCTAGCAGGAGCAACCAAGAAATCCAGCAAGGTGGTGGGCATGCCACCCACTTCTCTAGGAAAGTTCCTCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp TGGAGCTGGTTCTCCTGGGTTTTGGAGGCCAATGGGACCAAGAAGTaGAGAGAACACTTTGATTCTGAAGAGCTCCTCTGGGTTTCCACC +
Preference number: 6 (lower is better)
Translates to: WSWFSWVLEANGTKK*REHFDSEELLWVST
Trigger: GGTGGAAACCCAGAGGAGCTCTTCAGAATCAAAGTGTTCTCTCAACTTCTTGGTCCCATTGGCCTCCAAAACCCAGGAGAACCAGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS CAA 90 bp TGGAAGTTCAGCTTGGCTCAGGGGTGGAGCTGGTTCTCCTGGGTTTaGGAGGCCAATGGGACCAAGAAGTTGAGAGAACACTTTGATTCT +
Preference number: 6 (lower is better)
Translates to: WKFSLAQGWSWFSWV*EANGTKKLREHFDS
Trigger: AGAATCAAAGTGTTCTCTCAACTTCTTGGTCCCATTGGCCTCCAAAACCCAGGAGAACCAGCTCCACCCCTGAGCCAAGCTGAACTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467486.5
CDS TCA 72 bp CTACTTGGTGGTGGCTCCCTCGTGCCTCAGTACAAGTaGTGCAGTTCGCTTTACCCAATTCCTAAAAGTGGG +
Preference number: 6 (lower is better)
Translates to: LLGGGSLVPQYK*CSSLYPIPKSG
Trigger: CCCACTTTTAGGAATTGGGTAAAGCGAACTGCATCACTTGTACTGAGGCACGAGGGAGCCACCACCAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp TTGGGACAGGAATTTGATGAGGAGAGATTAAGGCCTTaGAGGAGGGGGCTTCGAGGGTGGATAGATTCAGCC +
Preference number: 6 (lower is better)
Translates to: LGQEFDEERLRP*RRGLRGWIDSA
Trigger: GGCTGAATCTATCCACCCTCGAAGCCCCCTCCTTCAAGGCCTTAATCTCTCCTCATCAAATTCCTGTCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp ATGAGCTATTGTGGTCATCTGTACCCATACCATAAATaGGAGCCTGAAAGCTCAGGGGGCTGGCCGTTAGCG +
Preference number: 6 (lower is better)
Translates to: MSYCGHLYPYHK*EPESSGGWPLA
Trigger: CGCTAACGGCCAGCCCCCTGAGCTTTCAGGCTCTCATTTATGGTATGGGTACAGATGACCACAATAGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp ACCTTGGACAGATCTCTGCGGATCAGATTACCCAGCTaGAAAATGCCACACACACCCCTGCCCTGGTTATTT +
Preference number: 6 (lower is better)
Translates to: TLDRSLRIRLPS*KMPHTPLPWLF
Trigger: AAATAACCAGGGCAGGGGTGTGTGTGGCATTTTGCAGCTGGGTAATCTGATCCGCAGAGATCTGTCCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp AGGAGGAGAAACCACTTGCCCAAACTAGTACTAGGCTaGGACCTGAGTCTGGGTGTTCTGACTCAAAACCTG +
Preference number: 6 (lower is better)
Translates to: RRRNHLPKLVLG*DLSLGVLTQNL
Trigger: CAGGTTTTGAGTCAGAACACCCAGACTCAGGTCTCAGCCTAGTACTAGTTTGGGCAAGTGGTTTCTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp ACCTGCCCCCATAGCTCTTGGGTTATTTGCAACCAATaGAGATTTGTTCTTCTGCACCTTTGGGGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: TCPHSSWVICNQ*RFVLLHLWGWA
Trigger: TGCCCAGCCCCAAAGGTGCAGAAGAACAAATCTTCATTGGTTGCAAATAACCCAAGAGCTATGGGGGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp TCTGAAGAGCAGGTGAAAGCCCACCAGAATCGAGTCTaGGAAGCAGCTAGTCTATTCATCAGCCACAGCAAG +
Preference number: 6 (lower is better)
Translates to: SEEQVKAHQNRV*EAASLFISHSK
Trigger: CTTGCTGTGGCTGATGAATAGACTAGCTGCTTCCAAGACTCGATTCTGGTGGGCTTTCACCTGCTCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp ACAGAGGGCAAGTCAGGATCTAGAGGAAACTTCCAGAAACCTTTTTaGACAGCTGTTCCTGGTGAACCAGCTGGAAGGGAGAAGGAGGAA +
Preference number: 6 (lower is better)
Translates to: TEGKSGSRGNFQKPF*TAVPGEPAGREKEE
Trigger: TTCCTCCTTCTCCCTTCCAGCTGGTTCACCAGGAACAGCTGTCAAAAAAGGTTTCTGGAAGTTTCCTCTAGATCCTGACTTGCCCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp AAGCAAGTAATTTGCCAGAAGTCACACAGCACACTAGTGGTGGAGTaGGGACCCATGCTTGGGTTCCTCAACTCTCAGCTCAGTGTTTTT +
Preference number: 6 (lower is better)
Translates to: KQVICQKSHSTLVVE*GPMLGFLNSQLSVF
Trigger: AAAAACACTGAGCTGAGAGTTGAGGAACCCAAGCATGGGTCCCAACTCCACCACTAGTGTGCTGTGTGACTTCTGGCAAATTACTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp GCAATGGGATTTCATCTTAAGTATTCAAAAGGGCTGTaGGAATCCCTCGCGGGAGACTTGTGGCATAGATGG +
Preference number: 6 (lower is better)
Translates to: AMGFHLKYSKGL*ESLAGDLWHRW
Trigger: CCATCTATGCCACAAGTCTCCCGCGAGGGATTCTCACAGCCCTTTTGAATACTTAAGATGAAATCCCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp GTAGAGGAAGAAAGAGGCCCAGAACACACACGCCACTaGTTCAAGGTCACACAGAGAACTCAAGCAAATTCA +
Preference number: 6 (lower is better)
Translates to: VEEERGPEHTRH*FKVTQRTQANS
Trigger: TGAATTTGCTTGAGTTCTCTGTGTGACCTTGAACAAGTGGCGTGTGTGTTCTGGGCCTCTTTCTTCCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp AAGTCAGGATCTAGAGGAAACTTCCAGAAACCTTTTTaGACAGCTGTTCCTGGTGAACCAGCTGGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: KSGSRGNFQKPF*TAVPGEPAGRE
Trigger: CTCCCTTCCAGCTGGTTCACCAGGAACAGCTGTCAAAAAAGGTTTCTGGAAGTTTCCTCTAGATCCTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp TCAACTACACATAATTCGGGTTATAGCAGAGCATATTaGACTCGAGATTCTCATCCCAGTGCCGCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: STTHNSGYSRAY*TRDSHPSAAEA
Trigger: TGCTTCTGCGGCACTGGGATGAGAATCTCGAGTTCAATATGCTCTGCTATAACCCGAATTATGTGTAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS TCA 72 bp CATGACATCTATGTAATTGGCTACCAGGCAAGCAGGTaGTGCATATCCCAAGAAGAAGAAAGTGTCATAGGC +
Preference number: 6 (lower is better)
Translates to: HDIYVIGYQASR*CISQEEESVIG
Trigger: GCCTATGACACTTTCTTCTTCTTGGGATATGCATCACCTGCTTGCCTGGTAGCCAATTACATAGATGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp CACCACCTCTTCTTAGTGAGGGAGCCACTAATGATCTaGAAGGCAATACTAGTATGTATTAAGGAAGCTTCC +
Preference number: 6 (lower is better)
Translates to: HHLFLVREPLMI*KAILVCIKEAS
Trigger: GGAAGCTTCCTTAATACATACTAGTATTGCCTTGCAGATCATTAGTGGCTCCCTCACTAAGAAGAGGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp CCCTTTCTTCAGACAGTGCAGGGCATAAATATTCCTTaGTATGACCTAGAAAGCAAGGGCTGGTTTAGCAAG +
Preference number: 6 (lower is better)
Translates to: PFLQTVQGINIP*YDLESKGWFSK
Trigger: CTTGCTAAACCAGCCCTTGCTTTCTAGGTCATACAAAGGAATATTTATGCCCTGCACTGTCTGAAGAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS GCA 72 bp CTGCCCTGGTTATTTTTACACTGGCTTTGCAGAGCATaGTATGTTACAGCTGAAGAATGTGTCCATCTTTTT +
Preference number: 6 (lower is better)
Translates to: LPWLFLHWLCRA*YVTAEECVHLF
Trigger: AAAAAGATGGACACATTCTTCAGCTGTAACATAGCATGCTCTGCAAAGCCAGTGTAAAAATAACCAGGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp TCTTCATTGACTTCTGTGACCATGTCTGTTCTTTTAGGACTATTTTaGCACAGACTGCTGCTTAAATCTAACACGTCAACTCACAAGGTG +
Preference number: 6 (lower is better)
Translates to: SSLTSVTMSVLLGLF*HRLLLKSNTSTHKV
Trigger: CACCTTGTGAGTTGACGTGTTAGATTTAAGCAGCAGTCTGTGCAAAAATAGTCCTAAAAGAACAGACATGGTCACAGAAGTCAATGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp ACCCAATTCCTAAAAGTGGGAAAATTAAGTAAGGTGTaGTCTGGTGTCTTCATTGACTTCTGTGACCATGTC +
Preference number: 6 (lower is better)
Translates to: TQFLKVGKLSKV*SGVFIDFCDHV
Trigger: GACATGGTCACAGAAGTCAATGAAGACACCAGACAACACCTTACTTAATTTTCCCACTTTTAGGAATTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 90 bp GTTCGCTTTACCCAATTCCTAAAAGTGGGAAAATTAAGTAAGGTGTaGTCTGGTGTCTTCATTGACTTCTGTGACCATGTCTGTTCTTTT +
Preference number: 6 (lower is better)
Translates to: VRFTQFLKVGKLSKV*SGVFIDFCDHVCSF
Trigger: AAAAGAACAGACATGGTCACAGAAGTCAATGAAGACACCAGACAACACCTTACTTAATTTTCCCACTTTTAGGAATTGGGTAAAGCGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13
CDS CAA 72 bp ACTTCTGTGACCATGTCTGTTCTTTTAGGACTATTTTaGCACAGACTGCTGCTTAAATCTAACACGTCAACT +
Preference number: 6 (lower is better)
Translates to: TSVTMSVLLGLF*HRLLLKSNTST
Trigger: AGTTGACGTGTTAGATTTAAGCAGCAGTCTGTGCAAAAATAGTCCTAAAAGAACAGACATGGTCACAGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289815.13