RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VSIG4 (Homo sapiens)

Ensembl gene IDs: ENSG00000155659

Ensembl transcript IDs: ENST00000374737.9, ENST00000412866.2, ENST00000427538.5, ENST00000455586.6, ENST00000651578.1

Found 469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTaGCCTATGGCCCAAGAGCCCACCACCCATAAGAAGGGACTTGGG +
Preference number: 1 (lower is better)
Translates to: GHPHGFSRVVGLSGM*PMAQEPTTHKKGLG
Trigger: CCCAAGTCCCTTCTTATGGGTGGTGGGCTCTTGGGCCATAGGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR CCA 90 bp AGCCACTTGCGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTaGCCTCTCTGGCATGTGCCCTATGGCCCAAGAGCCCACCACCCA +
Preference number: 1 (lower is better)
Translates to: SHLRRWPPSWFLQSR*PLWHVPYGPRAHHP
Trigger: TGGGTGGTGGGCTCTTGGGCCATAGGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR CCA 90 bp CTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGCCCTATaGCCCAAGAGCCCACCACCCATAAGAAGGGACTTGGGGCTGTGG +
Preference number: 1 (lower is better)
Translates to: LMVSPESLASLACAL*PKSPPPIRRDLGLW
Trigger: CCACAGCCCCAAGTCCCTTCTTATGGGTGGTGGGCTCTTGGGCCATAGGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR CCA 90 bp TTGGCTCATCACTGGAGCAGCCACTTGCGAAGATGGCCACCCTCATaGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGCCCTGGCTG +
Preference number: 1 (lower is better)
Translates to: LAHHWSSHLRRWPPS*FLQSRWPLWHVPWL
Trigger: CAGCCAGGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651578.1
3UTR CCA 90 bp TTGGCTCATCACTGGAGCAGCCACTTGCGAAGATGGCCACCCTCATaGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGCCCTATGGC +
Preference number: 1 (lower is better)
Translates to: LAHHWSSHLRRWPPS*FLQSRWPLWHVPYG
Trigger: GCCATAGGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR GCA 90 bp GTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTaGGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTC +
Preference number: 1 (lower is better)
Translates to: VAQILGSWLITGAAT*EDGHPHGFSRVVGL
Trigger: GAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR CCA 90 bp GATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGAAGATaGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCAT +
Preference number: 1 (lower is better)
Translates to: DSGKLAHHWSSHLRR*PPSWFLQSRWPLWH
Trigger: ATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR CCA 90 bp CTATGGCCCAAGAGCCCACCACCCATAAGAAGGGACTTGGGGCTGTaGTCCTGGTTTCCCACCCTTCTGCCTCAATTCTTGCCAATTAAT +
Preference number: 1 (lower is better)
Translates to: LWPKSPPPIRRDLGL*SWFPTLLPQFLPIN
Trigger: ATTAATTGGCAAGAATTGAGGCAGAAGGGTGGGAAACCAGGACCACAGCCCCAAGTCCCTTCTTATGGGTGGTGGGCTCTTGGGCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR CCA 90 bp CATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTaGAGCAGCCACTTGCGAAGATGGCCACCCTCATGGTTTCTCCAG +
Preference number: 1 (lower is better)
Translates to: HQSSCCPDSGKLAHH*SSHLRRWPPSWFLQ
Trigger: CTGGAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR CCA 90 bp TATGCAGGGCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTaGCTCATCACTGGAGCAGCCACTTGCGAAGATGGCCACCCTCAT +
Preference number: 1 (lower is better)
Translates to: YAGLIRVVVAQILGS*LITGAATCEDGHPH
Trigger: ATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGCCCTGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR CCA 90 bp CCCAAGAGCCCACCACCCATAAGAAGGGACTTGGGGCTGTGGTCCTaGTTTCCCACCCTTCTGCCTCAATTCTTGCCAATTAATTATCAG +
Preference number: 1 (lower is better)
Translates to: PKSPPPIRRDLGLWS*FPTLLPQFLPINYQ
Trigger: CTGATAATTAATTGGCAAGAATTGAGGCAGAAGGGTGGGAAACCAGGACCACAGCCCCAAGTCCCTTCTTATGGGTGGTGGGCTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR CCA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATaGGCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCC +
Preference number: 1 (lower is better)
Translates to: KLNSVCRHDDQVLVL*ASSLWYLERSTRSP
Trigger: GGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCCAGGGCAAAGCCAGTaGCTCCCAGCGGCTCCAGTG +
Preference number: 2 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRPGQSQ*LPAAPV
Trigger: CACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGG...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR CAA 90 bp CAGCCACTTGCGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTaGGCCTCTCTGGCATGTGCCCTATGGCCCAAGAGCCCACCACCC +
Preference number: 2 (lower is better)
Translates to: QPLAKMATLMVSPES*ASLACALWPKSPPP
Trigger: GGGTGGTGGGCTCTTGGGCCATAGGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR-3UTR TCA 90 bp GCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGGAAGAGAGGTAGCAGGCCAGGGCAAAGCCAGTaGCTCCCAGCGGCTCCAGTG +
Preference number: 2 (lower is better)
Translates to: APVLVGGHFGLSRKRGSRPGQSQ*LPAAPV
Trigger: CACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGG...CCTGCTACCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTACTGGCATGTGCCCTATaGCCCAAGAGCCCACCACCC +
Preference number: 2 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVLACAL*PKSPPP
Trigger: GGGTGGTGGGCTCTTGGGCCATAGGGCACATGCCAG...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR CAA 90 bp GCATGTGCCCTATGGCCCAAGAGCCCACCACCCATAAGAAGGGACTaGGGGCTGTGGTCCTGGTTTCCCACCCTTCTGCCTCAATTCTTG +
Preference number: 2 (lower is better)
Translates to: ACALWPKSPPPIRRD*GLWSWFPTLLPQFL
Trigger: CAAGAATTGAGGCAGAAGGGTGGGAAACCAGGACCACAGCCCCAAGTCCCTTCTTATGGGTGGTGGGCTCTTGGGCCATAGGGCACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR-3UTR TCA 90 bp GCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACCTGAGCTGGCAGAGCTaGGCCTCCCTCGGGTCTTCT +
Preference number: 2 (lower is better)
Translates to: ASSLWYLERSTRSPRQRYLSWQS*ASLGSS
Trigger: AGAAGACCCGAGGGAGGCTCAGCTCTGCCAGCTCAG...GTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGGGTAGGCGGACACTTTaGGCTATCCAGGAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRGRRTL*AIQEER
Trigger: CCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACC...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp CCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGGCAGAAGGCAAGGACTaGCTAGGCAATTATGTCAGC +
Preference number: 2 (lower is better)
Translates to: PVTPSGSSVGRRTLWAIQAEGKD*LGNYVS
Trigger: GCTGACATAATTGCCTAGTCAGTCCTTGCCTTCTGC...CTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp TTTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCCTGAGCTGGCAGAGCTaGGCCTCCCTCGGGTCTTCT +
Preference number: 2 (lower is better)
Translates to: FCPQWPETHNPEELCPAGLSWQS*ASLGSS
Trigger: AGAAGACCCGAGGGAGGCTCAGCTCTGCCAGCTCAG...GCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp AGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAAGGTAGGCGGACACTTTaGGCTATCCAGGAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: REEYQKPPAEILEGPRAKGRRTL*AIQEER
Trigger: CCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACC...TTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp CGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGGGTAGGCGGACACTTTaGGCTATCCAGGAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: RRWPPSWFLQSRWPLWHVGRRTL*AIQEER
Trigger: CCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACC...CACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp TGTGTCCAGCAGGCGGGCGTAGTTGCCATTGATCTGGGCGATGATCTGGTACTCTCCCATCACACGCTCTaGTCAAGTCCCCAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: CVQQAGVVAIDLGDDLVLSHHTL*SSPQLP
Trigger: AGGAAGCTGGGGACTTGACCAGAGCGTGTGATGGGA...GAGTACCAGATCATCGCCCAGATCAATGGCAACTACGCCCGCCTGCTGGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651578.1
3UTR CAA 90 bp TGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTaGCGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCT +
Preference number: 2 (lower is better)
Translates to: CCPDSGKLAHHWSSH*RRWPPSWFLQSRWP
Trigger: AGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp CAGCAGGCGGGCGTAGTTGCCATTGATCTGGGCGATGATCTGGTACTCCTGTCCGCAGAAGGCAAGGACTaGCTAGGCAATTATGTCAGC +
Preference number: 2 (lower is better)
Translates to: QQAGVVAIDLGDDLVLLSAEGKD*LGNYVS
Trigger: GCTGACATAATTGCCTAGTCAGTCCTTGCCTTCTGC...GGACAGGAGTACCAGATCATCGCCCAGATCAATGGCAACTACGCCCGCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTACTCTGGCATGTGCCCTaGCTGCTTCGTAGACATGCT +
Preference number: 2 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVLWHVP*LLRRHA
Trigger: AGCATGTCTACGAAGCAGCCAGGGCACATGCCAGAG...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651578.1
3UTR CAA 90 bp CTATGCAGGGCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTaGGCTCATCACTGGAGCAGCCACTTGCGAAGATGGCCACCCTCA +
Preference number: 2 (lower is better)
Translates to: LCRAHQSSCCPDSGK*AHHWSSHLRRWPPS
Trigger: TGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGCCCTGCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGCAGCTGGCTTACTTaGGATGCATCTGGCAAATTC +
Preference number: 2 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSSSWLT*DASGKF
Trigger: GAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCT...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR GCA 90 bp GTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGGCATGTGCCCTGGCTaGTTCGTAGACATGCTCTTG +
Preference number: 2 (lower is better)
Translates to: VVVAQILGSWLITGAATCGMCPG*FVDMLL
Trigger: CAAGAGCATGTCTACGAAGCAGCCAGGGCACATGCC...GCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651578.1
3UTR-3UTR CCA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCAAGTCCTAGTGCTATaGGCATCTTCCCTCTGGTAT +
Preference number: 2 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRQVLVL*ASSLWY
Trigger: ATACCAGAGGGAAGATGCCCATAGCACTAGGACTTG...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp CATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTATCTGGGCGATGATCTaGTACTCCTGTCCTATGCAG +
Preference number: 2 (lower is better)
Translates to: HLANSRAKPVTPSGSSVGIWAMI*YSCPMQ
Trigger: CTGCATAGGACAGGAGTACCAGATCATCGCCCAGAT...ACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp GCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACCTCCCTCGGGTCTTCTaGTGGCAAGATGCCAAAGTT +
Preference number: 2 (lower is better)
Translates to: ASSLWYLERSTRSPRQRYLPRVF*WQDAKV
Trigger: AACTTTGGCATCTTGCCACCAGAAGACCCGAGGGAG...GTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp TTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGCTCCCTCGGGTCTTCTaGTGGCAAGATGCCAAAGTT +
Preference number: 2 (lower is better)
Translates to: FALSGQKLIIQRNCVQQALPRVF*WQDAKV
Trigger: AACTTTGGCATCTTGCCACCAGAAGACCCGAGGGAG...CGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp TTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGATCCTGGATATAGCTaGTCCTCTGAGCTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: FALSGQKLIIQRNCVQQADPGYS*SSELAE
Trigger: CTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATC...CGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp GCAGGGCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTTTTCTCCAGAGTCGTTaGCCTCTCTGGCATGTGCCC +
Preference number: 2 (lower is better)
Translates to: AGLIRVVVAQILGSWLITFLQSR*PLWHVP
Trigger: GGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAA...AGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAAGCAGCTGGCTTACTTaGGATGCATCTGGCAAATTC +
Preference number: 2 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVSSWLT*DASGKF
Trigger: GAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCT...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp TGTGTCCAGCAGGCGGGCGTAGTTGCCATTGATCTGGGCGATGATCTGGTACTCGCAAGATGCCAAAGTTaGATAGTGTCTGTAGGCATG +
Preference number: 2 (lower is better)
Translates to: CVQQAGVVAIDLGDDLVLARCQS*IVSVGM
Trigger: CATGCCTACAGACACTATTCAACTTTGGCATCTTGC...GAGTACCAGATCATCGCCCAGATCAATGGCAACTACGCCCGCCTGCTGGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGGTGGAGGAGCAGAACTaGACCCTGGCCTGTGAAATA +
Preference number: 2 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWVEEQN*TLACEI
Trigger: TATTTCACAGGCCAGGGTTCAGTTCTGCTCCTCCAC...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR GCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCCTGGCTTACTTGAGATaGATCTGGCAAATTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LVFREEYQKPPAEILEGPLAYLR*IWQIPG
Trigger: CCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAG...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR GCA 90 bp CTAGGCAATTATGTCAGCAGATCCTGGCCTAATGGGGCATTTTTAACAGACACTGGCCTCTCTGGCATGTaGCCTATGGCCCAAGAGCCC +
Preference number: 2 (lower is better)
Translates to: LGNYVSRSWPNGAFLTDTGLSGM*PMAQEP
Trigger: GGGCTCTTGGGCCATAGGGCACATGCCAGAGAGGCC...AGTGTCTGTTAAAAATGCCCCATTAGGCCAGGATCTGCTGACATAATTGCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR-3UTR CCA 90 bp AGAAAGAGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCGGTAGGCGGACACTTTaGGCTATCCAGGAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: RKRNDPGYSWSSELAELSGRRTL*AIQEER
Trigger: CCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACC...GCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCTCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp CATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTTACTTGAGATGCATCTaGCAAATTCCAGGGCAAAGC +
Preference number: 2 (lower is better)
Translates to: HLANSRAKPVTPSGSSVGYLRCI*QIPGQS
Trigger: GCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTA...ACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAGATCCTGGATATAGCTaGTCCTCTGAGCTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: EPNPAAGLLEMHLANSRADPGYS*SSELAE
Trigger: CTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATC...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp GCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGAAGATaGCCACCCTCATGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: AHQSSCCPDSGKLAHHWSSHLRR*PPSWFL
Trigger: GAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCT...GCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTATTGTTGCCCAGATTCTaGGAAGTTGGCTCATCACTG +
Preference number: 2 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVLLPRF*EVGSSL
Trigger: CAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAA...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAGCAAGATGCCAAAGTTaGATAGTGTCTGTAGGCATG +
Preference number: 2 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVARCQS*IVSVGM
Trigger: CATGCCTACAGACACTATTCAACTTTGGCATCTTGC...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp GCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACCAAGTCCTAGTGCTATaGGCATCTTCCCTCTGGTAT +
Preference number: 2 (lower is better)
Translates to: ASSLWYLERSTRSPRQRYQVLVL*ASSLWY
Trigger: ATACCAGAGGGAAGATGCCCATAGCACTAGGACTTG...GTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGAAGTTGGCTCATCACTaGAGCAGCCACTTGCGAAGA +
Preference number: 2 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWKLAHH*SSHLRR
Trigger: TCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTT...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp GATCTGGGCGATGATCTGGTACTCCTGTCCTATGCAGGGCTCATCAGAGTAGTTAGCAGCTGGCTTACTTaGGATGCATCTGGCAAATTC +
Preference number: 2 (lower is better)
Translates to: DLGDDLVLLSYAGLIRVVSSWLT*DASGKF
Trigger: GAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCT...AACTACTCTGATGAGCCCTGCATAGGACAGGAGTACCAGATCATCGCCCAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR GCA 90 bp CTCCTGTCCTATGCAGGGCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTCTGGCTTACTTGAGATaGATCTGGCAAATTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LLSYAGLIRVVVAQILGSLAYLR*IWQIPG
Trigger: CCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAG...ACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGCCCTGCATAGGACAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGGCAAGATGCCAAAGTTaGATAGTGTCTGTAGGCATG +
Preference number: 2 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWARCQS*IVSVGM
Trigger: CATGCCTACAGACACTATTCAACTTTGGCATCTTGC...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR GCA 90 bp CAGCAGGCGGGCGTAGTTGCCATTGATCTGGGCGATGATCTGGTACTCCTGTCCTTCTGCCTCAATTCTTaGCAATTAATTATCAGGATC +
Preference number: 2 (lower is better)
Translates to: QQAGVVAIDLGDDLVLLSFCLNS*QLIIRI
Trigger: GATCCTGATAATTAATTGGCAAGAATTGAGGCAGAA...GGACAGGAGTACCAGATCATCGCCCAGATCAATGGCAACTACGCCCGCCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR-3UTR GCA 90 bp GCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCACATCAGAGTAGTTGTTaGCCAGATTCTGGGAAGTTG +
Preference number: 2 (lower is better)
Translates to: AQSQIQQLAYLRCIWQIPHQSSC*PDSGKL
Trigger: CAACTTCCCAGAATCTGGGCAACAACTACTCTGATG...TGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CCA 90 bp CTAGGCAATTATGTCAGCAGATCCTGGCCTAATGGGGCATTTTTAACAGACACTCAGATTCTGGGAAGTTaGCTCATCACTGGAGCAGCC +
Preference number: 2 (lower is better)
Translates to: LGNYVSRSWPNGAFLTDTQILGS*LITGAA
Trigger: GGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTG...AGTGTCTGTTAAAAATGCCCCATTAGGCCAGGATCTGCTGACATAATTGCCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR TCA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTGCAGAAGGCAAGGACTaGCTAGGCAATTATGTCAGC +
Preference number: 2 (lower is better)
Translates to: KLNSVCRHDDQVLVLWASAEGKD*LGNYVS
Trigger: GCTGACATAATTGCCTAGTCAGTCCTTGCCTTCTGC...AGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR CCA 72 bp CCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTaGCATGTGCCCTATGGCCCAAGAGCCCACCACCCA +
Preference number: 3 (lower is better)
Translates to: PPSWFLQSRWPL*HVPYGPRAHHP
Trigger: TGGGTGGTGGGCTCTTGGGCCATAGGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR-3UTR CAA 90 bp CATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTCCAGCGGCTCCAGTGTaGGTAGGCGGACACTTTGGG +
Preference number: 3 (lower is better)
Translates to: HLANSRAKPVTPSGSSVGPAAPV*VGGHFG
Trigger: CCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGG...ACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR CCA 72 bp CGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTaGCCTCTCTGGCATGTGCCCTATGGCCCAAGAGCC +
Preference number: 3 (lower is better)
Translates to: RRWPPSWFLQSR*PLWHVPYGPRA
Trigger: GGCTCTTGGGCCATAGGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR CCA 72 bp TCTCCAGAGTCGTTGGCCTCTCTGGCATGTGCCCTATaGCCCAAGAGCCCACCACCCATAAGAAGGGACTTG +
Preference number: 3 (lower is better)
Translates to: SPESLASLACAL*PKSPPPIRRDL
Trigger: CAAGTCCCTTCTTATGGGTGGTGGGCTCTTGGGCCATAGGGCACATGCCAGAGAGGCCAACGACTCTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR-3UTR CAA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGCCAGCGGCTCCAGTGTaGGTAGGCGGACACTTTGGG +
Preference number: 3 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWPAAPV*VGGHFG
Trigger: CCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGG...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR GCA 72 bp CATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTaGCCTATGGCCCAAGAGCCCACCACCCATAAGAAG +
Preference number: 3 (lower is better)
Translates to: HGFSRVVGLSGM*PMAQEPTTHKK
Trigger: CTTCTTATGGGTGGTGGGCTCTTGGGCCATAGGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR CCA 72 bp AAGAGCCCACCACCCATAAGAAGGGACTTGGGGCTGTaGTCCTGGTTTCCCACCCTTCTGCCTCAATTCTTG +
Preference number: 3 (lower is better)
Translates to: KSPPPIRRDLGL*SWFPTLLPQFL
Trigger: CAAGAATTGAGGCAGAAGGGTGGGAAACCAGGACCACAGCCCCAAGTCCCTTCTTATGGGTGGTGGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR CCA 72 bp AAGTTGGCTCATCACTGGAGCAGCCACTTGCGAAGATaGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCT +
Preference number: 3 (lower is better)
Translates to: KLAHHWSSHLRR*PPSWFLQSRWP
Trigger: AGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR CCA 72 bp AGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTaGAGCAGCCACTTGCGAAGATGGCCACCCTCATGG +
Preference number: 3 (lower is better)
Translates to: SCCPDSGKLAHH*SSHLRRWPPSW
Trigger: CCATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CAA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCAGCAGCTGGCTTACTaGAGATGCATCTGGCAAATT +
Preference number: 3 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRQQLAY*RCIWQI
Trigger: AATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTG...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CAA 90 bp CCAATTAATTATCAGGATCCTACCACCCAGGGATTCTGGAAGCAGAAGGCAGATCCTCCGGCCTTAGGATaGGGTCTGTGCCACACCCCC +
Preference number: 3 (lower is better)
Translates to: PINYQDPTTQGFWKQKADPPALG*GLCHTP
Trigger: GGGGGTGTGGCACAGACCCAATCCTAAGGCCGGAGG...ATCTGCCTTCTGCTTCCAGAATCCCTGGGTGGTAGGATCCTGATAATTAATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR GCA 72 bp ATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTaGGAAGATGGCCACCCTCATGGTTTCTCCAGAGTC +
Preference number: 3 (lower is better)
Translates to: ILGSWLITGAAT*EDGHPHGFSRV
Trigger: GACTCTGGAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR CCA 72 bp GATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTaGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAG +
Preference number: 3 (lower is better)
Translates to: DDQVLVLWASSL*YLERSTRSPRQ
Trigger: CTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
3UTR CCA 72 bp CCACCACCCATAAGAAGGGACTTGGGGCTGTGGTCCTaGTTTCCCACCCTTCTGCCTCAATTCTTGCCAATT +
Preference number: 3 (lower is better)
Translates to: PPPIRRDLGLWS*FPTLLPQFLPI
Trigger: AATTGGCAAGAATTGAGGCAGAAGGGTGGGAAACCAGGACCACAGCCCCAAGTCCCTTCTTATGGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR GCA 72 bp ACTCCTGTCCTATGCAGGGCTCATCAGAGTAGTTGTTaGCCAGATTCTGGGAAGTTGGCTCATCACTGGAGC +
Preference number: 3 (lower is better)
Translates to: TPVLCRAHQSSC*PDSGKLAHHWS
Trigger: GCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGCCCTGCATAGGACAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR CCA 72 bp CTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTaGCTCATCACTGGAGCAGCCACTTGCGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: LIRVVVAQILGS*LITGAATCEDG
Trigger: GCCATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CAA 90 bp TGTGCCCTATGGCCCAAGAGCCCACCACCCATAAGAAGGGACTTGGGGCTGTGGGATCTAAATTATCCTTaGTGTTCAGAGGGCCAAAAC +
Preference number: 3 (lower is better)
Translates to: CALWPKSPPPIRRDLGLWDLNYP*CSEGQN
Trigger: GTTTTGGCCCTCTGAACACAAAGGATAATTTAGATC...CCACAGCCCCAAGTCCCTTCTTATGGGTGGTGGGCTCTTGGGCCATAGGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR-3UTR CAA 90 bp CTAGGCAATTATGTCAGCAGATCCTGGCCTAATGGGGCATTTTTAACAGACACTGTTTCTCCAGAGTCGTaGGCCTCTCTGGCATGTGCC +
Preference number: 3 (lower is better)
Translates to: LGNYVSRSWPNGAFLTDTVSPES*ASLACA
Trigger: GGCACATGCCAGAGAGGCCAACGACTCTGGAGAAAC...AGTGTCTGTTAAAAATGCCCCATTAGGCCAGGATCTGCTGACATAATTGCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR-3UTR CAA 90 bp GGCAATTATGTCAGCAGATCCTGGCCTAATGGGGCATTTTTAACAGACACTTTTCACTGGAGCAGCCACTaGCGAAGATGGCCACCCTCA +
Preference number: 3 (lower is better)
Translates to: GNYVSRSWPNGAFLTDTFHWSSH*RRWPPS
Trigger: TGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTG...AAAAGTGTCTGTTAAAAATGCCCCATTAGGCCAGGATCTGCTGACATAATTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
3UTR CCA 72 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATaGGCATCTTCCCTCTGGTATTTAGAGAGGAGTACC +
Preference number: 3 (lower is better)
Translates to: SVCRHDDQVLVL*ASSLWYLERST
Trigger: GGTACTCCTCTCTAAATACCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
3UTR CCA 72 bp CCAATTAATTATCAGGATCCTACCACCCAGGGATTCTaGAAGCAGAAGGCAGATGGATCTAAATTATCCTTT +
Preference number: 3 (lower is better)
Translates to: PINYQDPTTQGF*KQKADGSKLSF
Trigger: AAAGGATAATTTAGATCCATCTGCCTTCTGCTTCCAGAATCCCTGGGTGGTAGGATCCTGATAATTAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR TCA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGTTCCCTGGGGCACCGTaGAGCCATAACCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQFPGAP*SHNRCQ
Trigger: CTGGCAGCGGTTATGGCTTCACGGTGCCCCAGGGAA...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGTCTCCTGGAACCTTGTaGCTCACATGCAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PVTPSGSSVGRRTLWAIQSPGTL*LTCRRP
Trigger: GGGCCGCCTGCATGTGAGCCACAAGGTTCCAGGAGA...CTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGGCAGAAATAGGAGCCTaGGTCGGCTATCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: ANSRAKPVTPSGSSVGRRAEIGA*VGYHRR
Trigger: CCTGCGGTGATAGCCGACTCAGGCTCCTATTTCTGC...CCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGGAAGAGAGGTAGCAGGCTGAGCTGGCAGAGCTaGGCCTCCCTCGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: APVLVGGHFGLSRKRGSRLSWQS*ASLGSS
Trigger: AGAAGACCCGAGGGAGGCTCAGCTCTGCCAGCTCAG...CCTGCTACCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTCTGAGCTGGCAGAGCTaGGCCTCCCTCGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: DASGKFQGKASDSQRLQCLSWQS*ASLGSS
Trigger: AGAAGACCCGAGGGAGGCTCAGCTCTGCCAGCTCAG...ACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCTGGCATGTGCCCTATaGCCCAAGAGCCCACCACCC +
Preference number: 4 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQILACAL*PKSPPP
Trigger: GGGTGGTGGGCTCTTGGGCCATAGGGCACATGCCAG...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455586.6
3UTR CAA 72 bp GCGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTaGGCCTCTCTGGCATGTGCCCTATGGCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: AKMATLMVSPES*ASLACALWPKS
Trigger: GCTCTTGGGCCATAGGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR TCA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGGATGGTGACAGGGTCTaGGCCACGTTGTACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRDGDRV*ATLYQP
Trigger: TGGCTGGTACAACGTGGCTCAGACCCTGTCACCATC...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCAGGAGTCTGCCAGGTaGCTTCACACGTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRQESAR*LHTCSG
Trigger: GCCACTACACGTGTGAAGTCACCTGGCAGACTCCTG...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp ATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTTTCCCTGGGGCACCGTaGAGCCATAACCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MHLANSRAKPVTPSGSSVFPGAP*SHNRCQ
Trigger: CTGGCAGCGGTTATGGCTTCACGGTGCCCCAGGGAA...AACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGCCCCGAGCCTGGCATTaGAGGCTAATCCTCATTCCC +
Preference number: 4 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQPRAWH*RLILIP
Trigger: GGGAATGAGGATTAGCCTTCAATGCCAGGCTCGGGG...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCCCCCGAGCCTGGCATTaGAGGCTAATCCTCATTCCC +
Preference number: 4 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSPRAWH*RLILIP
Trigger: GGGAATGAGGATTAGCCTTCAATGCCAGGCTCGGGG...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GGCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACCAGGGCAAAGCCAGTaGCTCCCAGCGGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GIFPLVFREEYQKPPAEIPGQSQ*LPAAPV
Trigger: CACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGG...TATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCCTGAGCTGGCAGAGCTaGGCCTCCCTCGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVFREEYQKPPAEILEGPLSWQS*ASLGSS
Trigger: AGAAGACCCGAGGGAGGCTCAGCTCTGCCAGCTCAG...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGGCGGCCCTGGTACTTTaGCTGCTGGATATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQAALVL*LLDMVS
Trigger: GGAGACCATATCCAGCAGGCAAAGTACCAGGGCCGC...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCACAATGTCGCTGTGCTaGTCAGAGCCAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSTMSLC*SEPTWP
Trigger: GGGCCAGGTTGGCTCTGAGCAGCACAGCGACATTGT...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCTCCTGGAACCTTGTaGCTCACATGCAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: REEYQKPPAEILEGPRAKSPGTL*LTCRRP
Trigger: GGGCCGCCTGCATGTGAGCCACAAGGTTCCAGGAGA...TTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGGGTAGGCGGACACTTTaGGCTATCCAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PVTPSGSSVGRRTLWAIQGRRTL*AIQEER
Trigger: CCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACC...CTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGGGCTCAAACTTCTGGTaGCCGCCAGCGTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRGSNFW*PPASVT
Trigger: AGTCACAGACGCTGGCGGCCACCAGAAGTTTGAGCC...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGAAGCTGGCCCAGCACTaGTCTCTCCAAGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: PVTPSGSSVGRRTLWAIQKLAQH*SLQGSH
Trigger: ATGGCTACCTTGGAGAGACCAGTGCTGGGCCAGCTT...CTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651578.1
CDS-3UTR TCA 90 bp CTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCCAGGAGTCTGCCAGGTaGCTTCACACGTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: LEMHLANSRAKPVTPSGSQESAR*LHTCSG
Trigger: GCCACTACACGTGTGAAGTCACCTGGCAGACTCCTG...GGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp AGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCCCTTTCCCTGGGGCACCGTaGAGCCATAACCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RNDPGYSWSSELAELSLPFPGAP*SHNRCQ
Trigger: CTGGCAGCGGTTATGGCTTCACGGTGCCCCAGGGAA...AGGGAGGCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCACCAGGGCAAAGCCAGTaGCTCCCAGCGGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: EPNPAAGLLEMHLANSRAPGQSQ*LPAAPV
Trigger: CACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGG...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp AGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTCCAGGGCAAAGCCAGTaGCTCCCAGCGGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RVVVAQILGSWLITGAATPGQSQ*LPAAPV
Trigger: CACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGG...AGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GGCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTGAGCTGGCAGAGCTaGGCCTCCCTCGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GIFPLVFREEYQKPPAEILSWQS*ASLGSS
Trigger: AGAAGACCCGAGGGAGGCTCAGCTCTGCCAGCTCAG...TATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAAGCGGCCCTGGTACTTTaGCTGCTGGATATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: REEYQKPPAEILEGPRAKAALVL*LLDMVS
Trigger: GGAGACCATATCCAGCAGGCAAAGTACCAGGGCCGC...TTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCACCTTGTGGCTCACATaGAGGCGGCCCTGGTACTTT +
Preference number: 4 (lower is better)
Translates to: KPVTPSGSSVGRRTLWAITLWLT*RRPWYF
Trigger: AAAGTACCAGGGCCGCCTGCATGTGAGCCACAAGGT...GATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGCACAATGTCGCTGTGCTaGTCAGAGCCAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: EDGHPHGFSRVVGLSGMCTMSLC*SEPTWP
Trigger: GGGCCAGGTTGGCTCTGAGCAGCACAGCGACATTGT...GCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGTTCACAATGTCGCTGTaGTGCTCAGAGCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: ANSRAKPVTPSGSSVGRRFTMSL*CSEPTW
Trigger: CCAGGTTGGCTCTGAGCAGCACAGCGACATTGTGAA...CCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGCCATCCATGTCAGTaGTCCAGTCCCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSSHPCQ*SSPRTA
Trigger: AGCAGTCCTGGGACTGGACCACTGACATGGATGGCT...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGAGCCATCCATGTCAGTaGTCCAGTCCCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQSHPCQ*SSPRTA
Trigger: AGCAGTCCTGGGACTGGACCACTGACATGGATGGCT...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCTTCCTGGCCCAGCACTaGTCTCTCCAAGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: KPVTPSGSSVGRRTLWAIFLAQH*SLQGSH
Trigger: ATGGCTACCTTGGAGAGACCAGTGCTGGGCCAGGAA...GATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
CDS-3UTR CCA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGCTCTGGCATGTGCCCTaGCTGCTTCGTAGACATGCT +
Preference number: 4 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQLWHVP*LLRRHA
Trigger: AGCATGTCTACGAAGCAGCCAGGGCACATGCCAGAG...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000651578.1
CDS-3UTR TCA 90 bp ATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGATGGTGACAGGGTCTaGGCCACGTTGTACCAGCCA +
Preference number: 4 (lower is better)
Translates to: MHLANSRAKPVTPSGSSVDGDRV*ATLYQP
Trigger: TGGCTGGTACAACGTGGCTCAGACCCTGTCACCATC...AACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp TTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGAAGGGCCGCCAGCGTCTGTaGCTGCTTACTTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLPRFWEVGSSLEQPLAKGRQRL*LLTSLP
Trigger: AGGAAGGGAAGTAAGCAGTCACAGACGCTGGCGGCC...CTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCGTGTCCACTGTTAGGTaGCCCAGGAGTAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AGLLEMHLANSRAKPVTPVSTVR*PRSSRP
Trigger: GGGCCTGCTACTCCTGGGGCACCTAACAGTGGACAC...GGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCGCAGGGGGTCATAGGTaGAGGGAAGATTCACATCCC +
Preference number: 4 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQIAGGHR*REDSHP
Trigger: GGGATGTGAATCTTCCCTGCACCTATGACCCCCTGC...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTGCAGGGGGTCATAGGTaGAGGGAAGATTCACATCCC +
Preference number: 4 (lower is better)
Translates to: HLANSRAKPVTPSGSSVGAGGHR*REDSHP
Trigger: GGGATGTGAATCTTCCCTGCACCTATGACCCCCTGC...ACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAGTTGCCGCAGGGGGTCATAGGTaGAGGGAAGATTCACATCCC +
Preference number: 4 (lower is better)
Translates to: GQKLIIQRNCVQQAGVVAAGGHR*REDSHP
Trigger: GGGATGTGAATCTTCCCTGCACCTATGACCCCCTGC...GGCAACTACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGCCCTGGTACTTTGCCTaGTGGATATGGTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ANSRAKPVTPSGSSVGRRPWYFA*WIWSPE
Trigger: TTCTGGAGACCATATCCAGCAGGCAAAGTACCAGGG...CCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAGCGGCCCTGGTACTTTaGCTGCTGGATATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVAALVL*LLDMVS
Trigger: GGAGACCATATCCAGCAGGCAAAGTACCAGGGCCGC...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTACCTTGTGGCTCACATaGAGGCGGCCCTGGTACTTT +
Preference number: 4 (lower is better)
Translates to: HLANSRAKPVTPSGSSVGTLWLT*RRPWYF
Trigger: AAAGTACCAGGGCCGCCTGCATGTGAGCCACAAGGT...ACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTCTCTCACGACTTGGTTaGCATCAGGAGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DASGKFQGKASDSQRLQCLSRLG*HQESAR
Trigger: CCTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAG...ACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp ACTTGCGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCCTCTCACGACTTGGTTaGCATCAGGAGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TCEDGHPHGFSRVVGLSGLSRLG*HQESAR
Trigger: CCTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAG...GCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGGGTACTCCTGTCCTATaGAGGGCTCATCAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PVTPSGSSVGRRTLWAIQGTPVL*RAHQSS
Trigger: ACTACTCTGATGAGCCCTGCATAGGACAGGAGTACC...CTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp ATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCGGCCTCTCTGGCATGTaGCCTATGGCCCAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: IRVVVAQILGSWLITGAAGLSGM*PMAQEP
Trigger: GGGCTCTTGGGCCATAGGGCACATGCCAGAGAGGCC...GGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CCA 90 bp GCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCTCTCCTGGAACCTTGTaGCTCACATGCAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: AGLLEMHLANSRAKPVTPSPGTL*LTCRRP
Trigger: GGGCCGCCTGCATGTGAGCCACAAGGTTCCAGGAGA...GGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp TTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGTCTCCTGGAACCTTGTaGCTCACATGCAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: FALSGQKLIIQRNCVQQASPGTL*LTCRRP
Trigger: GGGCCGCCTGCATGTGAGCCACAAGGTTCCAGGAGA...CGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGGAAGAGAGGTAGCAGGCTCTGGCATGTGCCCTaGCTGCTTCGTAGACATGCT +
Preference number: 4 (lower is better)
Translates to: APVLVGGHFGLSRKRGSRLWHVP*LLRRHA
Trigger: AGCATGTCTACGAAGCAGCCAGGGCACATGCCAGAG...CCTGCTACCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000651578.1
CDS-3UTR CCA 90 bp AAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCGATCCTGGATATAGCTaGTCCTCTGAGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KPVTPSGSSVGRRTLWAIDPGYS*SSELAE
Trigger: CTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATC...GATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCGATCCTGGATATAGCTaGTCCTCTGAGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSDPGYS*SSELAE
Trigger: CTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATC...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGTCGTTGGCCTCTCTaGCATGTGCCCTATGGCCCA +
Preference number: 4 (lower is better)
Translates to: LVFREEYQKPPAEILEGPSRWPL*HVPYGP
Trigger: TGGGCCATAGGGCACATGCCAGAGAGGCCAACGACT...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR TCA 90 bp TTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGAAGCCCCGAGCCTGGCATTaGAGGCTAATCCTCATTCCC +
Preference number: 4 (lower is better)
Translates to: LLPRFWEVGSSLEQPLAKPRAWH*RLILIP
Trigger: GGGAATGAGGATTAGCCTTCAATGCCAGGCTCGGGG...CTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCCTATCACCGCAGGCTTaGAGAGTAAGGTACTTAGGG +
Preference number: 4 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSLSPQA*RVRYLG
Trigger: CCCTAAGTACCTTACTCTTCAAGCCTGCGGTGATAG...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GGCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATAGCAGAAATAGGAGCCTaGGTCGGCTATCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: GIFPLVFREEYQKPPAEIAEIGA*VGYHRR
Trigger: CCTGCGGTGATAGCCGACTCAGGCTCCTATTTCTGC...TATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCGCAGAAATAGGAGCCTaGGTCGGCTATCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: AGLLEMHLANSRAKPVTPAEIGA*VGYHRR
Trigger: CCTGCGGTGATAGCCGACTCAGGCTCCTATTTCTGC...GGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp ACTTTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGCTGAGCTGGCAGAGCTaGGCCTCCCTCGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TFALSGQKLIIQRNCVQQLSWQS*ASLGSS
Trigger: AGAAGACCCGAGGGAGGCTCAGCTCTGCCAGCTCAG...CTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGCCGCCAGCGTCTGTaGCTGCTTACTTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: AQSQIQQLAYLRCIWQIPGRQRL*LLTSLP
Trigger: AGGAAGGGAAGTAAGCAGTCACAGACGCTGGCGGCC...TGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGTTTCTTCCAGCCTCCTaGTACCAAAGAGGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: ANSRAKPVTPSGSSVGRRFLPAS*YQRGSN
Trigger: GTTTGAGCCTCTTTGGTAGCAGGAGGCTGGAAGAAA...CCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCCCCTGGTACTTTGCCTaGTGGATATGGTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSPWYFA*WIWSPE
Trigger: TTCTGGAGACCATATCCAGCAGGCAAAGTACCAGGG...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCTTGCCATCAGGAGTCTaGCAGGTGACTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQILPSGV*QVTSHV
Trigger: CACGTGTGAAGTCACCTGGCAGACTCCTGATGGCAA...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCTTCACAATGTCGCTGTaGTGCTCAGAGCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQIFTMSL*CSEPTW
Trigger: CCAGGTTGGCTCTGAGCAGCACAGCGACATTGTGAA...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAGTTGCCTTCACAATGTCGCTGTaGTGCTCAGAGCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: GQKLIIQRNCVQQAGVVAFTMSL*CSEPTW
Trigger: CCAGGTTGGCTCTGAGCAGCACAGCGACATTGTGAA...GGCAACTACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCACTGGAGCAGCCACTTaGGAAGATGGCCACCCTCAT +
Preference number: 4 (lower is better)
Translates to: LVFREEYQKPPAEILEGPTGAAT*EDGHPH
Trigger: ATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGT...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGTCCAGGGTGCTCAATTaGAGGGATACATCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQSRVLN*RDTSPG
Trigger: TCCAGGAGATGTATCCCTCCAATTGAGCACCCTGGA...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGCCATCCATGTCAGTaGTCCAGTCCCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: LVFREEYQKPPAEILEGPSHPCQ*SSPRTA
Trigger: AGCAGTCCTGGGACTGGACCACTGACATGGATGGCT...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp ATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTTTTCTCCAGAGTCGTTaGCCTCTCTGGCATGTGCCC +
Preference number: 4 (lower is better)
Translates to: MHLANSRAKPVTPSGSSVFLQSR*PLWHVP
Trigger: GGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAA...AACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGCCACTTGCGAAGATaGCCACCCTCATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LEMHLANSRAKPVTPSGSSHLRR*PPSWFL
Trigger: GAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCT...GGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGAAGTTGGCTCATCACTaGAGCAGCCACTTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQKLAHH*SSHLRR
Trigger: TCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTT...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGAAGTTGGCTCATCACTaGAGCAGCCACTTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRKLAHH*SSHLRR
Trigger: TCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTT...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp TCTGGCATGTGCCCTATGGCCCAAGAGCCCACCACCCATAAGAAGGGACTTGGGCCTCGGGTCTTCTGGTaGCAAGATGCCAAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: SGMCPMAQEPTTHKKGLGPRVFW*QDAKVE
Trigger: TTCAACTTTGGCATCTTGCCACCAGAAGACCCGAGG...CCCAAGTCCCTTCTTATGGGTGGTGGGCTCTTGGGCCATAGGGCACATGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CCA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCTCCCTCGGGTCTTCTaGTGGCAAGATGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQILPRVF*WQDAKV
Trigger: AACTTTGGCATCTTGCCACCAGAAGACCCGAGGGAG...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp TGTGTCCAGCAGGCGGGCGTAGTTGCCATTGATCTGGGCGATGATCTGGTACTCCTCCCTCGGGTCTTCTaGTGGCAAGATGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: CVQQAGVVAIDLGDDLVLLPRVF*WQDAKV
Trigger: AACTTTGGCATCTTGCCACCAGAAGACCCGAGGGAG...GAGTACCAGATCATCGCCCAGATCAATGGCAACTACGCCCGCCTGCTGGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGGCAGAAATAGGAGCCTaGGTCGGCTATCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWAEIGA*VGYHRR
Trigger: CCTGCGGTGATAGCCGACTCAGGCTCCTATTTCTGC...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTGCAGAAGGCAAGGACTaGCTAGGCAATTATGTCAGC +
Preference number: 4 (lower is better)
Translates to: DASGKFQGKASDSQRLQCAEGKD*LGNYVS
Trigger: GCTGACATAATTGCCTAGTCAGTCCTTGCCTTCTGC...ACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCTTTCTTCCAGCCTCCTaGTACCAAAGAGGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KPVTPSGSSVGRRTLWAIFLPAS*YQRGSN
Trigger: GTTTGAGCCTCTTTGGTAGCAGGAGGCTGGAAGAAA...GATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTCCCTGGTACTTTGCCTaGTGGATATGGTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: HLANSRAKPVTPSGSSVGPWYFA*WIWSPE
Trigger: TTCTGGAGACCATATCCAGCAGGCAAAGTACCAGGG...ACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCTTGCCATCAGGAGTCTaGCAGGTGACTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: LVFREEYQKPPAEILEGPLPSGV*QVTSHV
Trigger: CACGTGTGAAGTCACCTGGCAGACTCCTGATGGCAA...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GGCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTCTCACGACTTGGTTaGCATCAGGAGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GIFPLVFREEYQKPPAEILSRLG*HQESAR
Trigger: CCTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAG...TATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GGCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCCTCTCACGACTTGGTTaGCATCAGGAGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPEPNPAAGLLEMHLANSLSRLG*HQESAR
Trigger: CCTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAG...GGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GGCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCGGCATGTGCCCTGGCTaGTTCGTAGACATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GPEPNPAAGLLEMHLANSGMCPG*FVDMLL
Trigger: CAAGAGCATGTCTACGAAGCAGCCAGGGCACATGCC...GGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000651578.1
CDS-3UTR GCA 90 bp AGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCCCTACTGGAGCAGCCACTTaGGAAGATGGCCACCCTCAT +
Preference number: 4 (lower is better)
Translates to: RNDPGYSWSSELAELSLPTGAAT*EDGHPH
Trigger: ATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGT...AGGGAGGCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp TTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGAAGACTGGAGCAGCCACTTaGGAAGATGGCCACCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLPRFWEVGSSLEQPLAKTGAAT*EDGHPH
Trigger: ATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGT...CTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGGAAGAGAGGTAGCAGGGGTACTCCTGTCCTATaGAGGGCTCATCAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: APVLVGGHFGLSRKRGSRGTPVL*RAHQSS
Trigger: ACTACTCTGATGAGCCCTGCATAGGACAGGAGTACC...CCTGCTACCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GGCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCGCCAGCGTCTGTGACTaGTTACTTCCCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GPEPNPAAGLLEMHLANSASVCD*LLPFLP
Trigger: GGGAAGGAAGGGAAGTAAGCAGTCACAGACGCTGGC...GGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACCTGGCACTTCCAGGATaGGACGGCCATAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ASSLWYLERSTRSPRQRYLALPG*DGHKCP
Trigger: TGGACACTTATGGCCGTCCCATCCTGGAAGTGCCAG...GTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCCTGGCACTTCCAGGATaGGACGGCCATAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AGLLEMHLANSRAKPVTPLALPG*DGHKCP
Trigger: TGGACACTTATGGCCGTCCCATCCTGGAAGTGCCAG...GGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCGAGGGATACATCTCCTaGAACCTTGTGGCTCACATG +
Preference number: 4 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQIEGYIS*NLVAHM
Trigger: CATGTGAGCCACAAGGTTCCAGGAGATGTATCCCTC...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGGAGGGATACATCTCCTaGAACCTTGTGGCTCACATG +
Preference number: 4 (lower is better)
Translates to: RRWPPSWFLQSRWPLWHVEGYIS*NLVAHM
Trigger: CATGTGAGCCACAAGGTTCCAGGAGATGTATCCCTC...CACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGGAAGAGAGGTAGCAGGTCCAGGGTGCTCAATTaGAGGGATACATCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: APVLVGGHFGLSRKRGSRSRVLN*RDTSPG
Trigger: TCCAGGAGATGTATCCCTCCAATTGAGCACCCTGGA...CCTGCTACCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCTTATCTCTCACGACTTaGTTGCCATCAGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSLSLTT*LPSGVC
Trigger: GCAGACTCCTGATGGCAACCAAGTCGTGAGAGATAA...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp TTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGAAGAGCCATCCATGTCAGTaGTCCAGTCCCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: LLPRFWEVGSSLEQPLAKSHPCQ*SSPRTA
Trigger: AGCAGTCCTGGGACTGGACCACTGACATGGATGGCT...CTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGCCACTTGCGAAGATaGCCACCCTCATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LVFREEYQKPPAEILEGPSHLRR*PPSWFL
Trigger: GAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCT...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp ATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTCAGATTCTGGGAAGTTaGCTCATCACTGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: MHLANSRAKPVTPSGSSVQILGS*LITGAA
Trigger: GGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTG...AACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTACAGATTCTGGGAAGTTaGCTCATCACTGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVQILGS*LITGAA
Trigger: GGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTG...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAAATCTGGGCGATGATCTaGTACTCCTGTCCTATGCAG +
Preference number: 4 (lower is better)
Translates to: REEYQKPPAEILEGPRAKIWAMI*YSCPMQ
Trigger: CTGCATAGGACAGGAGTACCAGATCATCGCCCAGAT...TTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCGGTAGGCGGACACTTTaGGCTATCCAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GPEPNPAAGLLEMHLANSGRRTL*AIQEER
Trigger: CCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACC...GGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGCAAGTCCTAGTGCTATaGGCATCTTCCCTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQQVLVL*ASSLWY
Trigger: ATACCAGAGGGAAGATGCCCATAGCACTAGGACTTG...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTACTCCCTCGGGTCTTCTaGTGGCAAGATGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVLPRVF*WQDAKV
Trigger: AACTTTGGCATCTTGCCACCAGAAGACCCGAGGGAG...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTCCTGTCCTATGCAGGGCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTAGAGGCTCAAACTTCTaGTGGCCGCCAGCGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLSYAGLIRVVVAQILGSRGSNF*WPPASV
Trigger: CACAGACGCTGGCGGCCACCAGAAGTTTGAGCCTCT...ACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGCCCTGCATAGGACAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp CTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGATGGTGACAGGGTCTaGGCCACGTTGTACCAGCCA +
Preference number: 4 (lower is better)
Translates to: LIRVVVAQILGSWLITGADGDRV*ATLYQP
Trigger: TGGCTGGTACAACGTGGCTCAGACCCTGTCACCATC...TGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp ACTTTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGCAGGAGTCTGCCAGGTaGCTTCACACGTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: TFALSGQKLIIQRNCVQQQESAR*LHTCSG
Trigger: GCCACTACACGTGTGAAGTCACCTGGCAGACTCCTG...CTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp ATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGCAGAAGGCAAGGACTaGCTAGGCAATTATGTCAGC +
Preference number: 4 (lower is better)
Translates to: MHLANSRAKPVTPSGSSVAEGKD*LGNYVS
Trigger: GCTGACATAATTGCCTAGTCAGTCCTTGCCTTCTGC...AACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTAGCAGCTGGCTTACTTaGGATGCATCTGGCAAATTC +
Preference number: 4 (lower is better)
Translates to: DASGKFQGKASDSQRLQCSSWLT*DASGKF
Trigger: GAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCT...ACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp CATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGCAGCTGGCTTACTTaGGATGCATCTGGCAAATTC +
Preference number: 4 (lower is better)
Translates to: HLANSRAKPVTPSGSSVGSSWLT*DASGKF
Trigger: GAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCT...ACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGGCAAGATGCCAAAGTTaGATAGTGTCTGTAGGCATG +
Preference number: 4 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRARCQS*IVSVGM
Trigger: CATGCCTACAGACACTATTCAACTTTGGCATCTTGC...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGCAGGGGGTCATAGGTaGAGGGAAGATTCACATCCC +
Preference number: 4 (lower is better)
Translates to: AQSQIQQLAYLRCIWQIPAGGHR*REDSHP
Trigger: GGGATGTGAATCTTCCCTGCACCTATGACCCCCTGC...TGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp ATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTCCCTGGTACTTTGCCTaGTGGATATGGTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: MHLANSRAKPVTPSGSSVPWYFA*WIWSPE
Trigger: TTCTGGAGACCATATCCAGCAGGCAAAGTACCAGGG...AACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGACCTTGTGGCTCACATaGAGGCGGCCCTGGTACTTT +
Preference number: 4 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWTLWLT*RRPWYF
Trigger: AAAGTACCAGGGCCGCCTGCATGTGAGCCACAAGGT...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCATCCATCTCCAGGGTaGTCAATTGGAGGGATACAT +
Preference number: 4 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQIHPSPG*SIGGIH
Trigger: ATGTATCCCTCCAATTGAGCACCCTGGAGATGGATG...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCCATCCATCTCCAGGGTaGTCAATTGGAGGGATACAT +
Preference number: 4 (lower is better)
Translates to: LEMHLANSRAKPVTPSGSHPSPG*SIGGIH
Trigger: ATGTATCCCTCCAATTGAGCACCCTGGAGATGGATG...GGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGCATCCATCTCCAGGGTaGTCAATTGGAGGGATACAT +
Preference number: 4 (lower is better)
Translates to: RRWPPSWFLQSRWPLWHVHPSPG*SIGGIH
Trigger: ATGTATCCCTCCAATTGAGCACCCTGGAGATGGATG...CACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGAAAGAGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCACAATGTCGCTGTGCTaGTCAGAGCCAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RKRNDPGYSWSSELAELSTMSLC*SEPTWP
Trigger: GGGCCAGGTTGGCTCTGAGCAGCACAGCGACATTGT...GCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCTCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GGCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATATTCACAATGTCGCTGTaGTGCTCAGAGCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: GIFPLVFREEYQKPPAEIFTMSL*CSEPTW
Trigger: CCAGGTTGGCTCTGAGCAGCACAGCGACATTGTGAA...TATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGTCATGGTTGTAGGTaGCTCAGTCTTGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: DASGKFQGKASDSQRLQCCHGCR*LSLGLE
Trigger: CTCAAGACCAAGACTGAGGCACCTACAACCATGACA...ACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCTGTCATGGTTGTAGGTaGCTCAGTCTTGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQICHGCR*LSLGLE
Trigger: CTCAAGACCAAGACTGAGGCACCTACAACCATGACA...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGGAAGAGAGGTAGCAGGTGTCATGGTTGTAGGTaGCTCAGTCTTGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: APVLVGGHFGLSRKRGSRCHGCR*LSLGLE
Trigger: CTCAAGACCAAGACTGAGGCACCTACAACCATGACA...CCTGCTACCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGCATGTGCCCTGGCTaGTTCGTAGACATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AQSQIQQLAYLRCIWQIPGMCPG*FVDMLL
Trigger: CAAGAGCATGTCTACGAAGCAGCCAGGGCACATGCC...TGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000651578.1
CDS-3UTR GCA 90 bp GATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTCTGGCTTACTTGAGATaGATCTGGCAAATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DASGKFQGKASDSQRLQCLAYLR*IWQIPG
Trigger: CCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAG...ACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCCTGGCTTACTTGAGATaGATCTGGCAAATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LEMHLANSRAKPVTPSGSLAYLR*IWQIPG
Trigger: CCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAG...GGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCTGGCTTACTTGAGATaGATCTGGCAAATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQILAYLR*IWQIPG
Trigger: CCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAG...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTCTGGCACTTCCAGGATaGGACGGCCATAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RVVVAQILGSWLITGAATLALPG*DGHKCP
Trigger: TGGACACTTATGGCCGTCCCATCCTGGAAGTGCCAG...AGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp ATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCCTGGCACTTCCAGGATaGGACGGCCATAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: IRVVVAQILGSWLITGAALALPG*DGHKCP
Trigger: TGGACACTTATGGCCGTCCCATCCTGGAAGTGCCAG...GGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTACTTTGCCTGCTaGATATGGTCTCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: DASGKFQGKASDSQRLQCWYFAC*IWSPEE
Trigger: CTCTTCTGGAGACCATATCCAGCAGGCAAAGTACCA...ACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATTATCTCTCACGACTTaGTTGCCATCAGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: REEYQKPPAEILEGPRAKLSLTT*LPSGVC
Trigger: GCAGACTCCTGATGGCAACCAAGTCGTGAGAGATAA...TTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTTTGTCACTGTGGGCTTaGAGACAGAGAGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HLANSRAKPVTPSGSSVGLSLWA*RQRVSG
Trigger: TCCAGAAACTCTCTGTCTCCAAGCCCACAGTGACAA...ACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAAGCCAACCTGGCCCTTaGCAGTGCAGAAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: AQSQIQQLAYLRCIWQIPSQPGP*QCRNRS
Trigger: GCTCCTATTTCTGCACTGCCAAGGGCCAGGTTGGCT...TGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAGCCAACCTGGCCCTTaGCAGTGCAGAAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: EPNPAAGLLEMHLANSRASQPGP*QCRNRS
Trigger: GCTCCTATTTCTGCACTGCCAAGGGCCAGGTTGGCT...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GCAGGGCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTAGCCAACCTGGCCCTTaGCAGTGCAGAAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: AGLIRVVVAQILGSWLITSQPGP*QCRNRS
Trigger: GCTCCTATTTCTGCACTGCCAAGGGCCAGGTTGGCT...AGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCATTCCTGGCCCAGCACTaGTCTCTCCAAGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: EPNPAAGLLEMHLANSRAFLAQH*SLQGSH
Trigger: ATGGCTACCTTGGAGAGACCAGTGCTGGGCCAGGAA...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTTCCTGGCCCAGCACTaGTCTCTCCAAGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: IQQLAYLRCIWQIPGQSQFLAQH*SLQGSH
Trigger: ATGGCTACCTTGGAGAGACCAGTGCTGGGCCAGGAA...CTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
CDS-3UTR CCA 90 bp TTTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCTTTCTCCAGAGTCGTTaGCCTCTCTGGCATGTGCCC +
Preference number: 4 (lower is better)
Translates to: FCPQWPETHNPEELCPAGFLQSR*PLWHVP
Trigger: GGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAA...GCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCATTTCTCCAGAGTCGTTaGCCTCTCTGGCATGTGCCC +
Preference number: 4 (lower is better)
Translates to: EPNPAAGLLEMHLANSRAFLQSR*PLWHVP
Trigger: GGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAA...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATAAGCCACTTGCGAAGATaGCCACCCTCATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GIFPLVFREEYQKPPAEISHLRR*PPSWFL
Trigger: GAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCT...TATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATTGTTGCCCAGATTCTaGGAAGTTGGCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: REEYQKPPAEILEGPRAKLLPRF*EVGSSL
Trigger: CAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAA...TTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGTATGTCAGCAGATCCTaGCCTAATGGGGCATTTTTA +
Preference number: 4 (lower is better)
Translates to: PVTPSGSSVGRRTLWAIQYVSRS*PNGAFL
Trigger: TAAAAATGCCCCATTAGGCCAGGATCTGCTGACATA...CTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp TTTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGTAGGCGGACACTTTaGGCTATCCAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: FCPQWPETHNPEELCPAGGRRTL*AIQEER
Trigger: CCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACC...GCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAGGTAGGCGGACACTTTaGGCTATCCAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: EPNPAAGLLEMHLANSRAGRRTL*AIQEER
Trigger: CCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACC...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCCTCCCTCGGGTCTTCTaGTGGCAAGATGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: GPEPNPAAGLLEMHLANSLPRVF*WQDAKV
Trigger: AACTTTGGCATCTTGCCACCAGAAGACCCGAGGGAG...GGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCCCTCTCCCTCGGGTCTTCTaGTGGCAAGATGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RNDPGYSWSSELAELSLPLPRVF*WQDAKV
Trigger: AACTTTGGCATCTTGCCACCAGAAGACCCGAGGGAG...AGGGAGGCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCGATCCTGGATATAGCTaGTCCTCTGAGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AGLLEMHLANSRAKPVTPDPGYS*SSELAE
Trigger: CTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATC...GGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CACCATACAGCACAAGGAGATGATGAGGATGATGGCAAAGACAGGCAGGCTCTTAGAGGCTCAAACTTCTaGTGGCCGCCAGCGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HHTAQGDDEDDGKDRQALRGSNF*WPPASV
Trigger: CACAGACGCTGGCGGCCACCAGAAGTTTGAGCCTCT...AAGAGCCTGCCTGTCTTTGCCATCATCCTCATCATCTCCTTGTGCTGTATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651578.1
CDS-3UTR CCA 90 bp GCAGGGCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTTCCCATCACACGCTCTaGTCAAGTCCCCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: AGLIRVVVAQILGSWLITSHHTL*SSPQLP
Trigger: AGGAAGCTGGGGACTTGACCAGAGCGTGTGATGGGA...AGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651578.1
CDS-3UTR TCA 90 bp ATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGCACGTAGAAAGATGGTaGCAGGGTCTGAGCCACGTT +
Preference number: 4 (lower is better)
Translates to: IQQLAYLRCIWQIPGQSQHVERW*QGLSHV
Trigger: AACGTGGCTCAGACCCTGTCACCATCTTTCTACGTG...CTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGGCTTTGAGGAGTCTTTaGCCACAAACTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQALRSL*PQTSQC
Trigger: ACATTGTGAAGTTTGTGGTCAAAGACTCCTCAAAGC...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGCAGCTGGCTTACTTaGGATGCATCTGGCAAATTC +
Preference number: 4 (lower is better)
Translates to: LVFREEYQKPPAEILEGPSSWLT*DASGKF
Trigger: GAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCT...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAGTGGAGGAGCAGAACTaGACCCTGGCCTGTGAAATA +
Preference number: 4 (lower is better)
Translates to: EPNPAAGLLEMHLANSRAVEEQN*TLACEI
Trigger: TATTTCACAGGCCAGGGTTCAGTTCTGCTCCTCCAC...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GATCTGGGCGATGATCTGGTACTCCTGTCCTATGCAGGGCTCATCAGAGTAGTTGTGGAGGAGCAGAACTaGACCCTGGCCTGTGAAATA +
Preference number: 4 (lower is better)
Translates to: DLGDDLVLLSYAGLIRVVVEEQN*TLACEI
Trigger: TATTTCACAGGCCAGGGTTCAGTTCTGCTCCTCCAC...AACTACTCTGATGAGCCCTGCATAGGACAGGAGTACCAGATCATCGCCCAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp ATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCTTGCCATCAGGAGTCTaGCAGGTGACTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: IRVVVAQILGSWLITGAALPSGV*QVTSHV
Trigger: CACGTGTGAAGTCACCTGGCAGACTCCTGATGGCAA...GGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGAAAGAGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCTCACGACTTGGTTaGCATCAGGAGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RKRNDPGYSWSSELAELSLSRLG*HQESAR
Trigger: CCTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAG...GCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCTCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCTGTCATGGTTGTAGGTaGCTCAGTCTTGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LVFREEYQKPPAEILEGPCHGCR*LSLGLE
Trigger: CTCAAGACCAAGACTGAGGCACCTACAACCATGACA...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTCATCAGAGTAGTTGTTaGCCAGATTCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: DASGKFQGKASDSQRLQCHQSSC*PDSGKL
Trigger: CAACTTCCCAGAATCTGGGCAACAACTACTCTGATG...ACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GGCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCGGTACTCCTGTCCTATaGAGGGCTCATCAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: GPEPNPAAGLLEMHLANSGTPVL*RAHQSS
Trigger: ACTACTCTGATGAGCCCTGCATAGGACAGGAGTACC...GGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CACCATACAGCACAAGGAGATGATGAGGATGATGGCAAAGACAGGCAGGCTCTTGCCAGCGTCTGTGACTaGTTACTTCCCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: HHTAQGDDEDDGKDRQALASVCD*LLPFLP
Trigger: GGGAAGGAAGGGAAGTAAGCAGTCACAGACGCTGGC...AAGAGCCTGCCTGTCTTTGCCATCATCCTCATCATCTCCTTGTGCTGTATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651578.1
CDS-3UTR GCA 90 bp AGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAACACATATTCCCATTATaGCTAAAAGCTGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: REEYQKPPAEILEGPRAKHIFPL*LKAGPA
Trigger: TGCTGGGCCAGCTTTTAGGCATAATGGGAATATGTG...TTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651578.1
CDS-3UTR CCA 90 bp GCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCGAGGGATACATCTCCTaGAACCTTGTGGCTCACATG +
Preference number: 4 (lower is better)
Translates to: AGLLEMHLANSRAKPVTPEGYIS*NLVAHM
Trigger: CATGTGAGCCACAAGGTTCCAGGAGATGTATCCCTC...GGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATAGAGGGATACATCTCCTaGAACCTTGTGGCTCACATG +
Preference number: 4 (lower is better)
Translates to: GIFPLVFREEYQKPPAEIEGYIS*NLVAHM
Trigger: CATGTGAGCCACAAGGTTCCAGGAGATGTATCCCTC...TATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATATCCAGGGTGCTCAATTaGAGGGATACATCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GIFPLVFREEYQKPPAEISRVLN*RDTSPG
Trigger: TCCAGGAGATGTATCCCTCCAATTGAGCACCCTGGA...TATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTATTATCTCTCACGACTTaGTTGCCATCAGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVLSLTT*LPSGVC
Trigger: GCAGACTCCTGATGGCAACCAAGTCGTGAGAGATAA...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp TTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGAAGTGCCAGTTGTCACTGTaGGCTTGGAGACAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: LLPRFWEVGSSLEQPLAKCQLSL*AWRQRV
Trigger: AACTCTCTGTCTCCAAGCCCACAGTGACAACTGGCA...CTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGAAGATTGCCAGTTGTCACTGTaGGCTTGGAGACAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: VAQILGSWLITGAATCEDCQLSL*AWRQRV
Trigger: AACTCTCTGTCTCCAAGCCCACAGTGACAACTGGCA...ATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCACAGATTCTGGGAAGTTaGCTCATCACTGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: EPNPAAGLLEMHLANSRAQILGS*LITGAA
Trigger: GGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTG...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCATCTGGGCGATGATCTaGTACTCCTGTCCTATGCAG +
Preference number: 4 (lower is better)
Translates to: GPEPNPAAGLLEMHLANSIWAMI*YSCPMQ
Trigger: CTGCATAGGACAGGAGTACCAGATCATCGCCCAGAT...GGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCACTTTTGCCCTCAGTaGCCAGAAACTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQIHFCPQ*PETHNP
Trigger: TGGATTATGAGTTTCTGGCCACTGAGGGCAAAAGTG...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCTATGTCAGCAGATCCTaGCCTAATGGGGCATTTTTA +
Preference number: 4 (lower is better)
Translates to: KPVTPSGSSVGRRTLWAIYVSRS*PNGAFL
Trigger: TAAAAATGCCCCATTAGGCCAGGATCTGCTGACATA...GATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACCCTCGGGTCTTCTGGTaGCAAGATGCCAAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: ASSLWYLERSTRSPRQRYPRVFW*QDAKVE
Trigger: TTCAACTTTGGCATCTTGCCACCAGAAGACCCGAGG...GTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGCTATCACCGCAGGCTTaGAGAGTAAGGTACTTAGGG +
Preference number: 4 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWLSPQA*RVRYLG
Trigger: CCCTAAGTACCTTACTCTTCAAGCCTGCGGTGATAG...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp CGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGGCTTTGAGGAGTCTTTaGCCACAAACTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: RRWPPSWFLQSRWPLWHVALRSL*PQTSQC
Trigger: ACATTGTGAAGTTTGTGGTCAAAGACTCCTCAAAGC...CACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp AGAAAGAGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCGTGGAGGAGCAGAACTaGACCCTGGCCTGTGAAATA +
Preference number: 4 (lower is better)
Translates to: RKRNDPGYSWSSELAELSVEEQN*TLACEI
Trigger: TATTTCACAGGCCAGGGTTCAGTTCTGCTCCTCCAC...GCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp AAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAGTTGCCATTGATGTGGAGGAGCAGAACTaGACCCTGGCCTGTGAAATA +
Preference number: 4 (lower is better)
Translates to: KLIIQRNCVQQAGVVAIDVEEQN*TLACEI
Trigger: TATTTCACAGGCCAGGGTTCAGTTCTGCTCCTCCAC...ATCAATGGCAACTACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CCAATTAATTATCAGGATCCTACCACCCAGGGATTCTGGAAGCAGAAGGCAGATGCGGCCCTGGTACTTTaGCTGCTGGATATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PINYQDPTTQGFWKQKADAALVL*LLDMVS
Trigger: GGAGACCATATCCAGCAGGCAAAGTACCAGGGCCGC...ATCTGCCTTCTGCTTCCAGAATCCCTGGGTGGTAGGATCCTGATAATTAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR GCA 90 bp AGAAAGAGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCTTGCCATCAGGAGTCTaGCAGGTGACTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: RKRNDPGYSWSSELAELSLPSGV*QVTSHV
Trigger: CACGTGTGAAGTCACCTGGCAGACTCCTGATGGCAA...GCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CACCATACAGCACAAGGAGATGATGAGGATGATGGCAAAGACAGGCAGGCTCTTTTGCCATCAGGAGTCTaGCAGGTGACTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: HHTAQGDDEDDGKDRQALLPSGV*QVTSHV
Trigger: CACGTGTGAAGTCACCTGGCAGACTCCTGATGGCAA...AAGAGCCTGCCTGTCTTTGCCATCATCCTCATCATCTCCTTGTGCTGTATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651578.1
CDS-3UTR GCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCCATCAGAGTAGTTGTTaGCCAGATTCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LVFREEYQKPPAEILEGPHQSSC*PDSGKL
Trigger: CAACTTCCCAGAATCTGGGCAACAACTACTCTGATG...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACCTGGCTTACTTGAGATaGATCTGGCAAATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ASSLWYLERSTRSPRQRYLAYLR*IWQIPG
Trigger: CCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAG...GTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGACACTTTGGGCTGGCTaGTTCGTAGACATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWTLWAG*FVDMLL
Trigger: CAAGAGCATGTCTACGAAGCAGCCAGCCCAAAGTGT...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427538.5
CDS-3UTR GCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAACTTTCTTACCTGGCTaGTTCGTAGACATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVTFLPG*FVDMLL
Trigger: CAAGAGCATGTCTACGAAGCAGCCAGGTAAGAAAGT...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CCA 90 bp AGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCCCTTTGTCACTGTGGGCTTaGAGACAGAGAGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RNDPGYSWSSELAELSLPLSLWA*RQRVSG
Trigger: TCCAGAAACTCTCTGTCTCCAAGCCCACAGTGACAA...AGGGAGGCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCTTGTCACTGTGGGCTTaGAGACAGAGAGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VVVAQILGSWLITGAATCLSLWA*RQRVSG
Trigger: TCCAGAAACTCTCTGTCTCCAAGCCCACAGTGACAA...GCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGTGCCAGTTGTCACTGTaGGCTTGGAGACAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWCQLSL*AWRQRV
Trigger: AACTCTCTGTCTCCAAGCCCACAGTGACAACTGGCA...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAAGCCACTTGCGAAGATaGCCACCCTCATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LIRVVVAQILGSWLITGASHLRR*PPSWFL
Trigger: GAGAAACCATGAGGGTGGCCATCTTCGCAAGTGGCT...TGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCCCTTTGTTGCCCAGATTCTaGGAAGTTGGCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: RNDPGYSWSSELAELSLPLLPRF*EVGSSL
Trigger: CAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAA...AGGGAGGCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GCAGGGCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTATCTGGGCGATGATCTaGTACTCCTGTCCTATGCAG +
Preference number: 4 (lower is better)
Translates to: AGLIRVVVAQILGSWLITIWAMI*YSCPMQ
Trigger: CTGCATAGGACAGGAGTACCAGATCATCGCCCAGAT...AGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCCAAGTCCTAGTGCTATaGGCATCTTCCCTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: GPEPNPAAGLLEMHLANSQVLVL*ASSLWY
Trigger: ATACCAGAGGGAAGATGCCCATAGCACTAGGACTTG...GGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCACCTCGGGTCTTCTGGTaGCAAGATGCCAAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: EPNPAAGLLEMHLANSRAPRVFW*QDAKVE
Trigger: TTCAACTTTGGCATCTTGCCACCAGAAGACCCGAGG...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAGGACGGGGTCAAAAATaGAAGAGGAGAGACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVGRGQK*KRRDFL
Trigger: AAGAAAGTCTCTCCTCTTCCATTTTTGACCCCGTCC...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGATTATGCCTAAAAGCTaGCCCAGCACTGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: IQQLAYLRCIWQIPGQSQIMPKS*PSTGLS
Trigger: GGAGAGACCAGTGCTGGGCCAGCTTTTAGGCATAAT...CTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651578.1
3UTR CAA 72 bp GCCTCCCTCGGGTCTTCTGGTGGCAAGATGCCAAAGTaGAATAGTGTCTGTAGGCATGATGACCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: ASLGSSGGKMPK*NSVCRHDDQVL
Trigger: TAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCATCTTGCCACCAGAAGACCCGAGGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTGATGGTGACAGGGTCTaGGCCACGTTGTACCAGCCA +
Preference number: 4 (lower is better)
Translates to: KLNSVCRHDDQVLVLWASDGDRV*ATLYQP
Trigger: TGGCTGGTACAACGTGGCTCAGACCCTGTCACCATC...AGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGCAGGAGTCTGCCAGGTaGCTTCACACGTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWQESAR*LHTCSG
Trigger: GCCACTACACGTGTGAAGTCACCTGGCAGACTCCTG...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp CTAGGCAATTATGTCAGCAGATCCTGGCCTAATGGGGCATTTTTAACAGACACTCAGGAGTCTGCCAGGTaGCTTCACACGTGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: LGNYVSRSWPNGAFLTDTQESAR*LHTCSG
Trigger: GCCACTACACGTGTGAAGTCACCTGGCAGACTCCTG...AGTGTCTGTTAAAAATGCCCCATTAGGCCAGGATCTGCTGACATAATTGCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp CTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCACTATCACCGCAGGCTTaGAGAGTAAGGTACTTAGGG +
Preference number: 4 (lower is better)
Translates to: LIRVVVAQILGSWLITGALSPQA*RVRYLG
Trigger: CCCTAAGTACCTTACTCTTCAAGCCTGCGGTGATAG...TGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GGCGTAGTTGCCATTGATCTGGGCGATGATCTGGTACTCCTGTCCTATGCAGGGGCTTTGAGGAGTCTTTaGCCACAAACTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: GVVAIDLGDDLVLLSYAGALRSL*PQTSQC
Trigger: ACATTGTGAAGTTTGTGGTCAAAGACTCCTCAAAGC...CCCTGCATAGGACAGGAGTACCAGATCATCGCCCAGATCAATGGCAACTACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCATTTCTTCCAGCCTCCTaGTACCAAAGAGGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: AQSQIQQLAYLRCIWQIPFLPAS*YQRGSN
Trigger: GTTTGAGCCTCTTTGGTAGCAGGAGGCTGGAAGAAA...TGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGCATCCATCTCCAGGGTaGTCAATTGGAGGGATACAT +
Preference number: 4 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWHPSPG*SIGGIH
Trigger: ATGTATCCCTCCAATTGAGCACCCTGGAGATGGATG...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGACAATGTCGCTGTGCTaGTCAGAGCCAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWTMSLC*SEPTWP
Trigger: GGGCCAGGTTGGCTCTGAGCAGCACAGCGACATTGT...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCATGTCATGGTTGTAGGTaGCTCAGTCTTGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: AQSQIQQLAYLRCIWQIPCHGCR*LSLGLE
Trigger: CTCAAGACCAAGACTGAGGCACCTACAACCATGACA...TGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGCCTTCACTGTAGATGTTaGTTTCAAGGGGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: EDGHPHGFSRVVGLSGMCLHCRC*FQGVCH
Trigger: ATGACATACCCCTTGAAAGCAACATCTACAGTGAAG...GCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CCAATTAATTATCAGGATCCTACCACCCAGGGATTCTGGAAGCAGAAGGCAGATACTGGAGCAGCCACTTaGGAAGATGGCCACCCTCAT +
Preference number: 4 (lower is better)
Translates to: PINYQDPTTQGFWKQKADTGAAT*EDGHPH
Trigger: ATGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGT...ATCTGCCTTCTGCTTCCAGAATCCCTGGGTGGTAGGATCCTGATAATTAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR GCA 90 bp AGAAAGAGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCGGTACTCCTGTCCTATaGAGGGCTCATCAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RKRNDPGYSWSSELAELSGTPVL*RAHQSS
Trigger: ACTACTCTGATGAGCCCTGCATAGGACAGGAGTACC...GCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGAGGGATACATCTCCTaGAACCTTGTGGCTCACATG +
Preference number: 4 (lower is better)
Translates to: LIRVVVAQILGSWLITGAEGYIS*NLVAHM
Trigger: CATGTGAGCCACAAGGTTCCAGGAGATGTATCCCTC...TGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CCACAAAGATTCTTCCCATCACACGCTCTGGTCAAGTCCCCAGCTTCCTTCTTTTCCAGGGTGCTCAATTaGAGGGATACATCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PQRFFPSHALVKSPASFFSRVLN*RDTSPG
Trigger: TCCAGGAGATGTATCCCTCCAATTGAGCACCCTGGA...AAAGAAGGAAGCTGGGGACTTGACCAGAGCGTGTGATGGGAAGAATCTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651578.1
CDS-3UTR CCA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGTTATCTCTCACGACTTaGTTGCCATCAGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWLSLTT*LPSGVC
Trigger: GCAGACTCCTGATGGCAACCAAGTCGTGAGAGATAA...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCACTTTGATGGGTTCCTaGTTATTAGTCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: KPVTPSGSSVGRRTLWAITLMGS*LLVCCL
Trigger: TAAGCAACAGACTAATAACCAGGAACCCATCAAAGT...GATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp ACTTTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGAAGTTGGCTCATCACTaGAGCAGCCACTTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: TFALSGQKLIIQRNCVQQKLAHH*SSHLRR
Trigger: TCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTT...CTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CCACAAAGATTCTTCCCATCACACGCTCTGGTCAAGTCCCCAGCTTCCTTCTTTAAGTTGGCTCATCACTaGAGCAGCCACTTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: PQRFFPSHALVKSPASFFKLAHH*SSHLRR
Trigger: TCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTT...AAAGAAGGAAGCTGGGGACTTGACCAGAGCGTGTGATGGGAAGAATCTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651578.1
CDS-3UTR CCA 90 bp ATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTTGTTGCCCAGATTCTaGGAAGTTGGCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: IQQLAYLRCIWQIPGQSQLLPRF*EVGSSL
Trigger: CAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAA...CTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCTATGTCAGCAGATCCTaGCCTAATGGGGCATTTTTA +
Preference number: 4 (lower is better)
Translates to: LVFREEYQKPPAEILEGPYVSRS*PNGAFL
Trigger: TAAAAATGCCCCATTAGGCCAGGATCTGCTGACATA...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTACTTGAGATGCATCTaGCAAATTCCAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: ASSLWYLERSTRSPRQRYYLRCI*QIPGQS
Trigger: GCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTA...GTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GCAGGGCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTCAAGTCCTAGTGCTATaGGCATCTTCCCTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: AGLIRVVVAQILGSWLITQVLVL*ASSLWY
Trigger: ATACCAGAGGGAAGATGCCCATAGCACTAGGACTTG...AGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAAAGAGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCCTCGGGTCTTCTGGTaGCAAGATGCCAAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: RKRNDPGYSWSSELAELSPRVFW*QDAKVE
Trigger: TTCAACTTTGGCATCTTGCCACCAGAAGACCCGAGG...GCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp ATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTATACCAAATATAACTaGTGGGAGGAGAACCCCGAG +
Preference number: 4 (lower is better)
Translates to: IQQLAYLRCIWQIPGQSQYTKYN*WEENPE
Trigger: CTCGGGGTTCTCCTCCCATCAGTTATATTTGGTATA...CTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGTATACCAAATATAACTaGTGGGAGGAGAACCCCGAG +
Preference number: 4 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWYTKYN*WEENPE
Trigger: CTCGGGGTTCTCCTCCCATCAGTTATATTTGGTATA...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GATCTGGGCGATGATCTGGTACTCCTGTCCTATGCAGGGCTCATCAGAGTAGTTTATACCAAATATAACTaGTGGGAGGAGAACCCCGAG +
Preference number: 4 (lower is better)
Translates to: DLGDDLVLLSYAGLIRVVYTKYN*WEENPE
Trigger: CTCGGGGTTCTCCTCCCATCAGTTATATTTGGTATA...AACTACTCTGATGAGCCCTGCATAGGACAGGAGTACCAGATCATCGCCCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp AGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCCCTGCTTTGAGGAGTCTTTaGCCACAAACTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: RNDPGYSWSSELAELSLPALRSL*PQTSQC
Trigger: ACATTGTGAAGTTTGTGGTCAAAGACTCCTCAAAGC...AGGGAGGCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp CTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAAGCAGCTGGCTTACTTaGGATGCATCTGGCAAATTC +
Preference number: 4 (lower is better)
Translates to: LIRVVVAQILGSWLITGASSWLT*DASGKF
Trigger: GAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCT...TGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAGCAAGATGCCAAAGTTaGATAGTGTCTGTAGGCATG +
Preference number: 4 (lower is better)
Translates to: EPNPAAGLLEMHLANSRAARCQS*IVSVGM
Trigger: CATGCCTACAGACACTATTCAACTTTGGCATCTTGC...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp GCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCGCAAGATGCCAAAGTTaGATAGTGTCTGTAGGCATG +
Preference number: 4 (lower is better)
Translates to: AHQSSCCPDSGKLAHHWSARCQS*IVSVGM
Trigger: CATGCCTACAGACACTATTCAACTTTGGCATCTTGC...GCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAGTTGCCATTGATTTTCTTCCAGCCTCCTaGTACCAAAGAGGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KLIIQRNCVQQAGVVAIDFLPAS*YQRGSN
Trigger: GTTTGAGCCTCTTTGGTAGCAGGAGGCTGGAAGAAA...ATCAATGGCAACTACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CTAGGCAATTATGTCAGCAGATCCTGGCCTAATGGGGCATTTTTAACAGACACTACCTTGTGGCTCACATaGAGGCGGCCCTGGTACTTT +
Preference number: 4 (lower is better)
Translates to: LGNYVSRSWPNGAFLTDTTLWLT*RRPWYF
Trigger: AAAGTACCAGGGCCGCCTGCATGTGAGCCACAAGGT...AGTGTCTGTTAAAAATGCCCCATTAGGCCAGGATCTGCTGACATAATTGCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp ACTTTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGCATCCATCTCCAGGGTaGTCAATTGGAGGGATACAT +
Preference number: 4 (lower is better)
Translates to: TFALSGQKLIIQRNCVQQHPSPG*SIGGIH
Trigger: ATGTATCCCTCCAATTGAGCACCCTGGAGATGGATG...CTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTACTTCACTGTAGATGTTaGTTTCAAGGGGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: LSGQKLIIQRNCVQQAGVLHCRC*FQGVCH
Trigger: ATGACATACCCCTTGAAAGCAACATCTACAGTGAAG...TACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGGCATGTGCCCTGGCTaGTTCGTAGACATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWGMCPG*FVDMLL
Trigger: CAAGAGCATGTCTACGAAGCAGCCAGGGCACATGCC...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000651578.1
CDS-3UTR CCA 90 bp AAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAGTTGCCATTGATTTATCTCTCACGACTTaGTTGCCATCAGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: KLIIQRNCVQQAGVVAIDLSLTT*LPSGVC
Trigger: GCAGACTCCTGATGGCAACCAAGTCGTGAGAGATAA...ATCAATGGCAACTACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGCACTTTGATGGGTTCCTaGTTATTAGTCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: EDGHPHGFSRVVGLSGMCTLMGS*LLVCCL
Trigger: TAAGCAACAGACTAATAACCAGGAACCCATCAAAGT...GCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTAGCCAACCTGGCCCTTaGCAGTGCAGAAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: KLNSVCRHDDQVLVLWASSQPGP*QCRNRS
Trigger: GCTCCTATTTCTGCACTGCCAAGGGCCAGGTTGGCT...AGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGTTTCCCACCCTTCTGCCTCAATTCTTGCCAATTAATTATCAGGATCCTACCAAGCCATCCATGTCAGTaGTCCAGTCCCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GFPPFCLNSCQLIIRILPSHPCQ*SSPRTA
Trigger: AGCAGTCCTGGGACTGGACCACTGACATGGATGGCT...TGGTAGGATCCTGATAATTAATTGGCAAGAATTGAGGCAGAAGGGTGGGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CCA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGTTCCTGGCCCAGCACTaGTCTCTCCAAGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWFLAQH*SLQGSH
Trigger: ATGGCTACCTTGGAGAGACCAGTGCTGGGCCAGGAA...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
CDS-3UTR CCA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTCTCTGGCATGTGCCCTaGCTGCTTCGTAGACATGCT +
Preference number: 4 (lower is better)
Translates to: KLNSVCRHDDQVLVLWASLWHVP*LLRRHA
Trigger: AGCATGTCTACGAAGCAGCCAGGGCACATGCCAGAG...AGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000651578.1
CDS-3UTR CCA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGTTTCTCCAGAGTCGTTaGCCTCTCTGGCATGTGCCC +
Preference number: 4 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWFLQSR*PLWHVP
Trigger: GGGCACATGCCAGAGAGGCCAACGACTCTGGAGAAA...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTGCCTCAATTCTTGCCAATTAATTATCAGGATCCTACCACCCAGGGATTCTGGCAGATTCTGGGAAGTTaGCTCATCACTGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPQFLPINYQDPTTQGFWQILGS*LITGAA
Trigger: GGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTG...CCAGAATCCCTGGGTGGTAGGATCCTGATAATTAATTGGCAAGAATTGAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CCA 90 bp GCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCATACTTGAGATGCATCTaGCAAATTCCAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: AQSQIQQLAYLRCIWQIPYLRCI*QIPGQS
Trigger: GCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTA...TGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAAAGAGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCAAGTCCTAGTGCTATaGGCATCTTCCCTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: RKRNDPGYSWSSELAELSQVLVL*ASSLWY
Trigger: ATACCAGAGGGAAGATGCCCATAGCACTAGGACTTG...GCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCGGACACTTTGGGCTaGCTGCTTCGTAGACATGCT +
Preference number: 4 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWADTLG*LLRRHA
Trigger: AGCATGTCTACGAAGCAGCCAGCCCAAAGTGTCCGC...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427538.5
CDS-3UTR TCA 90 bp GGCAATTATGTCAGCAGATCCTGGCCTAATGGGGCATTTTTAACAGACACTTTTACCTCAGAAGGTGCCTaGGAGAGGGAAGGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: GNYVSRSWPNGAFLTDTFTSEGA*EREGSY
Trigger: ATAGCTGCCTTCCCTCTCTCAGGCACCTTCTGAGGT...AAAAGTGTCTGTTAAAAATGCCCCATTAGGCCAGGATCTGCTGACATAATTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR GCA 90 bp GGCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCCTTCACTGTAGATGTTaGTTTCAAGGGGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: GPEPNPAAGLLEMHLANSLHCRC*FQGVCH
Trigger: ATGACATACCCCTTGAAAGCAACATCTACAGTGAAG...GGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp CTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCTTCTGCCTCAATTCTTaGCAATTAATTATCAGGATC +
Preference number: 4 (lower is better)
Translates to: LEMHLANSRAKPVTPSGSFCLNS*QLIIRI
Trigger: GATCCTGATAATTAATTGGCAAGAATTGAGGCAGAA...GGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CCA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCACTTTGATGGGTTCCTaGTTATTAGTCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LVFREEYQKPPAEILEGPTLMGS*LLVCCL
Trigger: TAAGCAACAGACTAATAACCAGGAACCCATCAAAGT...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AGAAAGAGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCTACTTGAGATGCATCTaGCAAATTCCAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RKRNDPGYSWSSELAELSYLRCI*QIPGQS
Trigger: GCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTA...GCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCTCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTCTATCACCGCAGGCTTaGAGAGTAAGGTACTTAGGG +
Preference number: 4 (lower is better)
Translates to: KLNSVCRHDDQVLVLWASLSPQA*RVRYLG
Trigger: CCCTAAGTACCTTACTCTTCAAGCCTGCGGTGATAG...AGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp CTAGGCAATTATGTCAGCAGATCCTGGCCTAATGGGGCATTTTTAACAGACACTGCAGAAGGCAAGGACTaGCTAGGCAATTATGTCAGC +
Preference number: 4 (lower is better)
Translates to: LGNYVSRSWPNGAFLTDTAEGKD*LGNYVS
Trigger: GCTGACATAATTGCCTAGTCAGTCCTTGCCTTCTGC...AGTGTCTGTTAAAAATGCCCCATTAGGCCAGGATCTGCTGACATAATTGCCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GCCCAGAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCACTTCACTGTAGATGTTaGTTTCAAGGGGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: AQSQIQQLAYLRCIWQIPLHCRC*FQGVCH
Trigger: ATGACATACCCCTTGAAAGCAACATCTACAGTGAAG...TGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTGCCAGTTGTCACTGTaGGCTTGGAGACAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: KLNSVCRHDDQVLVLWASCQLSL*AWRQRV
Trigger: AACTCTCTGTCTCCAAGCCCACAGTGACAACTGGCA...AGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTGCCTCAATTCTTGCCAATTAATTATCAGGATCCTACCACCCAGGGATTCTGGTTGTTGCCCAGATTCTaGGAAGTTGGCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: LPQFLPINYQDPTTQGFWLLPRF*EVGSSL
Trigger: CAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAA...CCAGAATCCCTGGGTGGTAGGATCCTGATAATTAATTGGCAAGAATTGAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CCA 90 bp AAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAGTTGCCATTGATTATGTCAGCAGATCCTaGCCTAATGGGGCATTTTTA +
Preference number: 4 (lower is better)
Translates to: KLIIQRNCVQQAGVVAIDYVSRS*PNGAFL
Trigger: TAAAAATGCCCCATTAGGCCAGGATCTGCTGACATA...ATCAATGGCAACTACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGCCTCGGGTCTTCTGGTaGCAAGATGCCAAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWPRVFW*QDAKVE
Trigger: TTCAACTTTGGCATCTTGCCACCAGAAGACCCGAGG...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTAGCAGCTGGCTTACTTaGGATGCATCTGGCAAATTC +
Preference number: 4 (lower is better)
Translates to: KLNSVCRHDDQVLVLWASSSWLT*DASGKF
Trigger: GAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCT...AGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR TCA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGCCTCAGTCTTGGTCTTaGGTAGCTTTGAGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWPQSWS*VALRSV
Trigger: AACACTCCTCAAAGCTACTCAAGACCAAGACTGAGG...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412866.2
CDS-3UTR CCA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGTTGTCACTGTGGGCTTaGAGACAGAGAGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWLSLWA*RQRVSG
Trigger: TCCAGAAACTCTCTGTCTCCAAGCCCACAGTGACAA...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
3UTR CAA 72 bp TCTGGAAGCAGAAGGCAGATGGATCTAAATTATCCTTaGTGTTCAGAGGGCCAAAACAACCTCAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SGSRRQMDLNYP*CSEGQNNLRRC
Trigger: GCACCTTCTGAGGTTGTTTTGGCCCTCTGAACACAAAGGATAATTTAGATCCATCTGCCTTCTGCTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR TCA 90 bp TTAACAGACACTTTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTTATACCAAATATAACTaGTGGGAGGAGAACCCCGAG +
Preference number: 4 (lower is better)
Translates to: LTDTFALSGQKLIIQRNCYTKYN*WEENPE
Trigger: CTCGGGGTTCTCCTCCCATCAGTTATATTTGGTATA...ACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAAAGTGTCTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTCATCAGAGTAGTTGTTaGCCAGATTCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: KLNSVCRHDDQVLVLWASHQSSC*PDSGKL
Trigger: CAACTTCCCAGAATCTGGGCAACAACTACTCTGATG...AGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR GCA 90 bp GGCAATTATGTCAGCAGATCCTGGCCTAATGGGGCATTTTTAACAGACACTTTTCTGGCTTACTTGAGATaGATCTGGCAAATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GNYVSRSWPNGAFLTDTFLAYLR*IWQIPG
Trigger: CCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAG...AAAAGTGTCTGTTAAAAATGCCCCATTAGGCCAGGATCTGCTGACATAATTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGCACTTTTGCCCTCAGTaGCCAGAAACTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWHFCPQ*PETHNP
Trigger: TGGATTATGAGTTTCTGGCCACTGAGGGCAAAAGTG...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTCACTTTTGCCCTCAGTaGCCAGAAACTCATAATCCA +
Preference number: 4 (lower is better)
Translates to: KLNSVCRHDDQVLVLWASHFCPQ*PETHNP
Trigger: TGGATTATGAGTTTCTGGCCACTGAGGGCAAAAGTG...AGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp TTAACAGACACTTTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTTACTTGAGATGCATCTaGCAAATTCCAGGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LTDTFALSGQKLIIQRNCYLRCI*QIPGQS
Trigger: GCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTA...ACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAAAGTGTCTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp GGTTTCCCACCCTTCTGCCTCAATTCTTGCCAATTAATTATCAGGATCCTACCAAGAGACTTTCTTACCTaGCTGCTTCGTAGACATGCT +
Preference number: 4 (lower is better)
Translates to: GFPPFCLNSCQLIIRILPRDFLT*LLRRHA
Trigger: AGCATGTCTACGAAGCAGCCAGGTAAGAAAGTCTCT...TGGTAGGATCCTGATAATTAATTGGCAAGAATTGAGGCAGAAGGGTGGGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CCA 90 bp CTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCATCCTTATTAAGATTCTaGTCAGTTACTTCTAGCCAC +
Preference number: 4 (lower is better)
Translates to: LIRVVVAQILGSWLITGASLLRF*SVTSSH
Trigger: GTGGCTAGAAGTAACTGACCAGAATCTTAATAAGGA...TGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651578.1
CDS-3UTR GCA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGCTTCACTGTAGATGTTaGTTTCAAGGGGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWLHCRC*FQGVCH
Trigger: ATGACATACCCCTTGAAAGCAACATCTACAGTGAAG...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CCA 90 bp CTAGGCAATTATGTCAGCAGATCCTGGCCTAATGGGGCATTTTTAACAGACACTACTTTGATGGGTTCCTaGTTATTAGTCTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LGNYVSRSWPNGAFLTDTTLMGS*LLVCCL
Trigger: TAAGCAACAGACTAATAACCAGGAACCCATCAAAGT...AGTGTCTGTTAAAAATGCCCCATTAGGCCAGGATCTGCTGACATAATTGCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGCCAGCGGCTCCAGTGTaGGTAGGCGGACACTTTGGG +
Preference number: 5 (lower is better)
Translates to: ANSRAKPVTPSGSSVGRRPAAPV*VGGHFG
Trigger: CCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGG...CCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGCACTGGAGCAGCCACTaGCGAAGATGGCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: PVTPSGSSVGRRTLWAIQHWSSH*RRWPPS
Trigger: TGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTG...CTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTGGCGGCCCTGGTACTTaGCCTGCTGGATATGGTCTC +
Preference number: 5 (lower is better)
Translates to: DASGKFQGKASDSQRLQCGGPGT*PAGYGL
Trigger: GAGACCATATCCAGCAGGCAAAGTACCAGGGCCGCC...ACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGTCTCTCACGACTTGGTaGCCATCAGGAGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PVTPSGSSVGRRTLWAIQSLTTW*PSGVCQ
Trigger: CTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAGA...CTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp TGTGCCCTATGGCCCAAGAGCCCACCACCCATAAGAAGGGACTTGGGGCTGTGGACCCCGAGCCTGGCATaGAAGGCTAATCCTCATTCC +
Preference number: 5 (lower is better)
Translates to: CALWPKSPPPIRRDLGLWTPSLA*KANPHS
Trigger: GGAATGAGGATTAGCCTTCAATGCCAGGCTCGGGGT...CCACAGCCCCAAGTCCCTTCTTATGGGTGGTGGGCTCTTGGGCCATAGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CAA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCACTGGAGCAGCCACTaGCGAAGATGGCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQIHWSSH*RRWPPS
Trigger: TGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTG...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS CCA 90 bp CCGGTCATCCATCTCCAGGGTGCTCAATTGGAGGGATACATCTCCTaGAACCTTGTGGCTCACATGCAGGCGGCCCTGGTACTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: PVIHLQGAQLEGYIS*NLVAHMQAALVLCL
Trigger: CAGGCAAAGTACCAGGGCCGCCTGCATGTGAGCCACAAGGTTCCAGGAGATGTATCCCTCCAATTGAGCACCCTGGAGATGGATGACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CCA 90 bp AAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTaGGCTGGCTGCTTCGTAGACATGCTCTTGTTGGGATGTCTTCCG +
Preference number: 5 (lower is better)
Translates to: KPVTPSGSSVGRRTL*AGCFVDMLLLGCLP
Trigger: CGGAAGACATCCCAACAAGAGCATGTCTACGAAGCAGCCAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427538.5
CDS-3UTR CAA 90 bp GGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAGTTGCCGACTTGGGTGTAGCCTaGCAGGGGGTCATAGGTGCA +
Preference number: 5 (lower is better)
Translates to: GQKLIIQRNCVQQAGVVADLGVA*QGVIGA
Trigger: TGCACCTATGACCCCCTGCAAGGCTACACCCAAGTC...GGCAACTACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTCCACTTCACCAAGACTaGGGTGTAGCCTTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: HLANSRAKPVTPSGSSVGPLHQD*GVALQG
Trigger: CCCCTGCAAGGCTACACCCAAGTCTTGGTGAAGTGG...ACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAACCACTTCACCAAGACTaGGGTGTAGCCTTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: REEYQKPPAEILEGPRAKPLHQD*GVALQG
Trigger: CCCCTGCAAGGCTACACCCAAGTCTTGGTGAAGTGG...TTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGACCCCGAGCCTGGCATaGAAGGCTAATCCTCATTCC +
Preference number: 5 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRTPSLA*KANPHS
Trigger: GGAATGAGGATTAGCCTTCAATGCCAGGCTCGGGGT...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GGCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACCAGCGGCTCCAGTGTaGGTAGGCGGACACTTTGGG +
Preference number: 5 (lower is better)
Translates to: GIFPLVFREEYQKPPAEIPAAPV*VGGHFG
Trigger: CCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGG...TATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp TTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGCCAGCGGCTCCAGTGTaGGTAGGCGGACACTTTGGG +
Preference number: 5 (lower is better)
Translates to: FALSGQKLIIQRNCVQQAPAAPV*VGGHFG
Trigger: CCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGG...CGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCCCATAAGAAGGGACTaGGGGCTGTGGTCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRPIRRD*GLWSWF
Trigger: AAACCAGGACCACAGCCCCAAGTCCCTTCTTATGGG...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS GCA 90 bp TCCCCATCACAGCCAGAGCTACTTCTGTCCTTTCTTCCAGCCTCCTaGTACCAAAGAGGCTCAAACTTCTGGTGGCCGCCAGCGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SPSQPELLLSFLPAS*YQRGSNFWWPPASV
Trigger: CACAGACGCTGGCGGCCACCAGAAGTTTGAGCCTCTTTGGTAGCAGGAGGCTGGAAGAAAGGACAGAAGTAGCTCTGGCTGTGATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS CCA 90 bp CAAACTTCACAATGTCGCTGTGCTGCTCAGAGCCAACCTGGCCCTTaGCAGTGCAGAAATAGGAGCCTGAGTCGGCTATCACCGCAGGCT +
Preference number: 5 (lower is better)
Translates to: QTSQCRCAAQSQPGP*QCRNRSLSRLSPQA
Trigger: AGCCTGCGGTGATAGCCGACTCAGGCTCCTATTTCTGCACTGCCAAGGGCCAGGTTGGCTCTGAGCAGCACAGCGACATTGTGAAGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCGACTTGGGTGTAGCCTaGCAGGGGGTCATAGGTGCA +
Preference number: 5 (lower is better)
Translates to: LVFREEYQKPPAEILEGPDLGVA*QGVIGA
Trigger: TGCACCTATGACCCCCTGCAAGGCTACACCCAAGTC...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGAAGATGGCGGCCCTGGTACTTaGCCTGCTGGATATGGTCTC +
Preference number: 5 (lower is better)
Translates to: VAQILGSWLITGAATCEDGGPGT*PAGYGL
Trigger: GAGACCATATCCAGCAGGCAAAGTACCAGGGCCGCC...ATCTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTCTCCAGGGTGCTCAATaGGAGGGATACATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: HLANSRAKPVTPSGSSVGLQGAQ*EGYISW
Trigger: CCAGGAGATGTATCCCTCCAATTGAGCACCCTGGAG...ACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAACTCCAGGGTGCTCAATaGGAGGGATACATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: REEYQKPPAEILEGPRAKLQGAQ*EGYISW
Trigger: CCAGGAGATGTATCCCTCCAATTGAGCACCCTGGAG...TTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGGTTGTCACTGTGGGCTaGGAGACAGAGAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRVVTVG*ETESFW
Trigger: CCAGAAACTCTCTGTCTCCAAGCCCACAGTGACAAC...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCATAACCGCTGCCAGTaGTCACTGTGGGCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQIHNRCQ*SLWAWR
Trigger: TCTCCAAGCCCACAGTGACAACTGGCAGCGGTTATG...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGCCATAACCGCTGCCAGTaGTCACTGTGGGCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: EDGHPHGFSRVVGLSGMCHNRCQ*SLWAWR
Trigger: TCTCCAAGCCCACAGTGACAACTGGCAGCGGTTATG...GCACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGGCTATCACCGCAGGCTaGAAGAGTAAGGTACTTAGG +
Preference number: 5 (lower is better)
Translates to: ANSRAKPVTPSGSSVGRRAITAG*KSKVLR
Trigger: CCTAAGTACCTTACTCTTCAAGCCTGCGGTGATAGC...CCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGGTAGGTGCCTCAGTCTaGGTCTTGAGTAGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: ANSRAKPVTPSGSSVGRRVGASV*VLSSFE
Trigger: CTCAAAGCTACTCAAGACCAAGACTGAGGCACCTAC...CCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCCCTCACTGGAGCAGCCACTaGCGAAGATGGCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: RNDPGYSWSSELAELSLPHWSSH*RRWPPS
Trigger: TGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTG...AGGGAGGCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp ATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGCCAGCGGCTCCAGTGTaGGTAGGCGGACACTTTGGG +
Preference number: 5 (lower is better)
Translates to: IQQLAYLRCIWQIPGQSQPAAPV*VGGHFG
Trigger: CCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGG...CTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACGACTTGGGTGTAGCCTaGCAGGGGGTCATAGGTGCA +
Preference number: 5 (lower is better)
Translates to: ASSLWYLERSTRSPRQRYDLGVA*QGVIGA
Trigger: TGCACCTATGACCCCCTGCAAGGCTACACCCAAGTC...GTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGGGCGGCCCTGGTACTTaGCCTGCTGGATATGGTCTC +
Preference number: 5 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWGGPGT*PAGYGL
Trigger: GAGACCATATCCAGCAGGCAAAGTACCAGGGCCGCC...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCCTTATCTCTCACGACTaGGTTGCCATCAGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSLISHD*VAIRSL
Trigger: CAGACTCCTGATGGCAACCAAGTCGTGAGAGATAAG...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp TCTGGCATGTGCCCTATGGCCCAAGAGCCCACCACCCATAAGAAGGGACTTGGGCTTATCTCTCACGACTaGGTTGCCATCAGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: SGMCPMAQEPTTHKKGLGLISHD*VAIRSL
Trigger: CAGACTCCTGATGGCAACCAAGTCGTGAGAGATAAG...CCCAAGTCCCTTCTTATGGGTGGTGGGCTCTTGGGCCATAGGGCACATGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CAA 90 bp AGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCGTTGTCACTGTGGGCTaGGAGACAGAGAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: RGVPEAPGRDTRRAQSQIVVTVG*ETESFW
Trigger: CCAGAAACTCTCTGTCTCCAAGCCCACAGTGACAAC...GATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGGCTATCACCGCAGGCTaGAAGAGTAAGGTACTTAGG +
Preference number: 5 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQAITAG*KSKVLR
Trigger: CCTAAGTACCTTACTCTTCAAGCCTGCGGTGATAGC...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CAGCAGGCGGGCGTAGTTGCCATTGATCTGGGCGATGATCTGGTACTCCTGTCCGCTATCACCGCAGGCTaGAAGAGTAAGGTACTTAGG +
Preference number: 5 (lower is better)
Translates to: QQAGVVAIDLGDDLVLLSAITAG*KSKVLR
Trigger: CCTAAGTACCTTACTCTTCAAGCCTGCGGTGATAGC...GGACAGGAGTACCAGATCATCGCCCAGATCAATGGCAACTACGCCCGCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGGTAGGTGCCTCAGTCTaGGTCTTGAGTAGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LANSRAKPVTPSGSSVGRVGASV*VLSSFE
Trigger: CTCAAAGCTACTCAAGACCAAGACTGAGGCACCTAC...CCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGGTAGGTGCCTCAGTCTaGGTCTTGAGTAGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQVGASV*VLSSFE
Trigger: CTCAAAGCTACTCAAGACCAAGACTGAGGCACCTAC...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GTCCAGCAGGCGGGCGTAGTTGCCATTGATCTGGGCGATGATCTGGTACTCCTGGTAGGTGCCTCAGTCTaGGTCTTGAGTAGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: VQQAGVVAIDLGDDLVLLVGASV*VLSSFE
Trigger: CTCAAAGCTACTCAAGACCAAGACTGAGGCACCTAC...CAGGAGTACCAGATCATCGCCCAGATCAATGGCAACTACGCCCGCCTGCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGTTCGTAGACATGCTCTaGTTGGGATGTCTTCCGACA +
Preference number: 5 (lower is better)
Translates to: ANSRAKPVTPSGSSVGRRFVDML*LGCLPT
Trigger: TGTCGGAAGACATCCCAACAAGAGCATGTCTACGAA...CCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp TTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGTTTCTCCAGAGTCGTaGGCCTCTCTGGCATGTGCC +
Preference number: 5 (lower is better)
Translates to: FALSGQKLIIQRNCVQQAVSPES*ASLACA
Trigger: GGCACATGCCAGAGAGGCCAACGACTCTGGAGAAAC...CGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCACACTGGAGCAGCCACTaGCGAAGATGGCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: EPNPAAGLLEMHLANSRAHWSSH*RRWPPS
Trigger: TGAGGGTGGCCATCTTCGCAAGTGGCTGCTCCAGTG...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS GCA 90 bp CCTGGAACCTTGTGGCTCACATGCAGGCGGCCCTGGTACTTTGCCTaGTGGATATGGTCTCCAGAAGAGTCACGTAGAAAGATGGTGACA +
Preference number: 5 (lower is better)
Translates to: PGTLWLTCRRPWYFA*WIWSPEESRRKMVT
Trigger: TGTCACCATCTTTCTACGTGACTCTTCTGGAGACCATATCCAGCAGGCAAAGTACCAGGGCCGCCTGCATGTGAGCCACAAGGTTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS GCA 90 bp GTGCTCAATTGGAGGGATACATCTCCTGGAACCTTGTGGCTCACATaGAGGCGGCCCTGGTACTTTGCCTGCTGGATATGGTCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: VLNWRDTSPGTLWLT*RRPWYFACWIWSPE
Trigger: TTCTGGAGACCATATCCAGCAGGCAAAGTACCAGGGCCGCCTGCATGTGAGCCACAAGGTTCCAGGAGATGTATCCCTCCAATTGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCCTCCAGGGTGCTCAATaGGAGGGATACATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VVVAQILGSWLITGAATCLQGAQ*EGYISW
Trigger: CCAGGAGATGTATCCCTCCAATTGAGCACCCTGGAG...GCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCCCTTCTCTCACGACTTGGTaGCCATCAGGAGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: RNDPGYSWSSELAELSLPSLTTW*PSGVCQ
Trigger: CTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAGA...AGGGAGGCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCTCTCTCACGACTTGGTaGCCATCAGGAGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: AGLLEMHLANSRAKPVTPSLTTW*PSGVCQ
Trigger: CTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAGA...GGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCCAGGAAGAGAGGTAGCAGGCTTATCTCTCACGACTaGGTTGCCATCAGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: APVLVGGHFGLSRKRGSRLISHD*VAIRSL
Trigger: CAGACTCCTGATGGCAACCAAGTCGTGAGAGATAAG...CCTGCTACCTCTCTTCCTGGATAGCCCAAAGTGTCCGCCTACCAACACTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTCTTATCTCTCACGACTaGGTTGCCATCAGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: HLANSRAKPVTPSGSSVGLISHD*VAIRSL
Trigger: CAGACTCCTGATGGCAACCAAGTCGTGAGAGATAAG...ACCAACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CATGTGCCCTGGCTGCTTCGTAGACATGCTCTTGTTGGGATGTCTTCCGACAGACATAACCGCTGCCAGTaGTCACTGTGGGCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: HVPWLLRRHALVGMSSDRHNRCQ*SLWAWR
Trigger: TCTCCAAGCCCACAGTGACAACTGGCAGCGGTTATG...TCTGTCGGAAGACATCCCAACAAGAGCATGTCTACGAAGCAGCCAGGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651578.1
CDS-3UTR CAA 90 bp AGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCCCTACCCCGAGCCTGGCATaGAAGGCTAATCCTCATTCC +
Preference number: 5 (lower is better)
Translates to: RNDPGYSWSSELAELSLPTPSLA*KANPHS
Trigger: GGAATGAGGATTAGCCTTCAATGCCAGGCTCGGGGT...AGGGAGGCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp TTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGACCCCGAGCCTGGCATaGAAGGCTAATCCTCATTCC +
Preference number: 5 (lower is better)
Translates to: FALSGQKLIIQRNCVQQATPSLA*KANPHS
Trigger: GGAATGAGGATTAGCCTTCAATGCCAGGCTCGGGGT...CGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CGAAGATGGCCACCCTCATGGTTTCTCCAGAGTCGTTGGCCTCTCTGGCATGTGGTAGACATGCTCTTGTaGGGATGTCTTCCGACAGAG +
Preference number: 5 (lower is better)
Translates to: RRWPPSWFLQSRWPLWHVVDMLL*GCLPTE
Trigger: CTCTGTCGGAAGACATCCCAACAAGAGCATGTCTAC...CACATGCCAGAGAGGCCAACGACTCTGGAGAAACCATGAGGGTGGCCATCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCAGTTCGTAGACATGCTCTaGTTGGGATGTCTTCCGACA +
Preference number: 5 (lower is better)
Translates to: GVPEAPGRDTRRAQSQIQFVDML*LGCLPT
Trigger: TGTCGGAAGACATCCCAACAAGAGCATGTCTACGAA...CTGGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCTTCGTAGACATGCTCTaGTTGGGATGTCTTCCGACA +
Preference number: 5 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSFVDML*LGCLPT
Trigger: TGTCGGAAGACATCCCAACAAGAGCATGTCTACGAA...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAGTTTCTCCAGAGTCGTaGGCCTCTCTGGCATGTGCC +
Preference number: 5 (lower is better)
Translates to: EPNPAAGLLEMHLANSRAVSPES*ASLACA
Trigger: GGCACATGCCAGAGAGGCCAACGACTCTGGAGAAAC...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCACTCCAGGGTGCTCAATaGGAGGGATACATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: EPNPAAGLLEMHLANSRALQGAQ*EGYISW
Trigger: CCAGGAGATGTATCCCTCCAATTGAGCACCCTGGAG...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGTCTCTCACGACTTGGTaGCCATCAGGAGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWSLTTW*PSGVCQ
Trigger: CTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAGA...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCACATAACCGCTGCCAGTaGTCACTGTGGGCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: EPNPAAGLLEMHLANSRAHNRCQ*SLWAWR
Trigger: TCTCCAAGCCCACAGTGACAACTGGCAGCGGTTATG...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp ATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTGTAGACATGCTCTTGTaGGGATGTCTTCCGACAGAG +
Preference number: 5 (lower is better)
Translates to: MHLANSRAKPVTPSGSSVVDMLL*GCLPTE
Trigger: CTCTGTCGGAAGACATCCCAACAAGAGCATGTCTAC...AACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGAAAGAGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCGTTTCTCCAGAGTCGTaGGCCTCTCTGGCATGTGCC +
Preference number: 5 (lower is better)
Translates to: RKRNDPGYSWSSELAELSVSPES*ASLACA
Trigger: GGCACATGCCAGAGAGGCCAACGACTCTGGAGAAAC...GCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCTCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCGGCAAGATGCCAAAGTaGAATAGTGTCTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: KPVTPSGSSVGRRTLWAIGKMPK*NSVCRH
Trigger: ATGCCTACAGACACTATTCAACTTTGGCATCTTGCC...GATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCGGCAAGATGCCAAAGTaGAATAGTGTCTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSGKMPK*NSVCRH
Trigger: ATGCCTACAGACACTATTCAACTTTGGCATCTTGCC...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGCCTCCGGCCTTAGGATaGGGTCTGTGCCACACCCCC +
Preference number: 5 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWPPALG*GLCHTP
Trigger: GGGGGTGTGGCACAGACCCAATCCTAAGGCCGGAGG...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CAA 90 bp CTGCCTCAATTCTTGCCAATTAATTATCAGGATCCTACCACCCAGGGATTCTGGGGCGGCCCTGGTACTTaGCCTGCTGGATATGGTCTC +
Preference number: 5 (lower is better)
Translates to: LPQFLPINYQDPTTQGFWGGPGT*PAGYGL
Trigger: GAGACCATATCCAGCAGGCAAAGTACCAGGGCCGCC...CCAGAATCCCTGGGTGGTAGGATCCTGATAATTAATTGGCAAGAATTGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CAA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGGTTGTCACTGTGGGCTaGGAGACAGAGAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWVVTVG*ETESFW
Trigger: CCAGAAACTCTCTGTCTCCAAGCCCACAGTGACAAC...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AAGCCAGTGACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTGGGCTATCAGCTTTGAGGAGTCTTaGACCACAAACTTCACAATG +
Preference number: 5 (lower is better)
Translates to: KPVTPSGSSVGRRTLWAISFEES*TTNFTM
Trigger: CATTGTGAAGTTTGTGGTCAAAGACTCCTCAAAGCT...GATAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGTCACTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGTAGACATGCTCTTGTaGGGATGTCTTCCGACAGAG +
Preference number: 5 (lower is better)
Translates to: VVVAQILGSWLITGAATCVDMLL*GCLPTE
Trigger: CTCTGTCGGAAGACATCCCAACAAGAGCATGTCTAC...GCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp ATGCCAAAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGCCAGCGGCTCCAGTGTaGGTAGGCGGACACTTTGGG +
Preference number: 5 (lower is better)
Translates to: MPKLNSVCRHDDQVLVLWPAAPV*VGGHFG
Trigger: CCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGG...CCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTTTGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp ATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTTCAGCAGCTGGCTTACTaGAGATGCATCTGGCAAATT +
Preference number: 5 (lower is better)
Translates to: MHLANSRAKPVTPSGSSVQQLAY*RCIWQI
Trigger: AATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTG...AACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAAGGCAAGATGCCAAAGTaGAATAGTGTCTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: REEYQKPPAEILEGPRAKGKMPK*NSVCRH
Trigger: ATGCCTACAGACACTATTCAACTTTGGCATCTTGCC...TTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GATGCATCTGGCAAATTCCAGGGCAAAGCCAGTGACTCCCAGCGGCTCCAGTGTGGCAAGATGCCAAAGTaGAATAGTGTCTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: DASGKFQGKASDSQRLQCGKMPK*NSVCRH
Trigger: ATGCCTACAGACACTATTCAACTTTGGCATCTTGCC...ACACTGGAGCCGCTGGGAGTCACTGGCTTTGCCCTGGAATTTGCCAGATGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS TCA 90 bp TTGCCTGCTGGATATGGTCTCCAGAAGAGTCACGTAGAAAGATGGTaGCAGGGTCTGAGCCACGTTGTACCAGCCACTTCACCAAGACTT +
Preference number: 5 (lower is better)
Translates to: LPAGYGLQKSHVERW*QGLSHVVPATSPRL
Trigger: AAGTCTTGGTGAAGTGGCTGGTACAACGTGGCTCAGACCCTGTCACCATCTTTCTACGTGACTCTTCTGGAGACCATATCCAGCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCGTAGGTGCCTCAGTCTaGGTCTTGAGTAGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: AHQSSCCPDSGKLAHHWSVGASV*VLSSFE
Trigger: CTCAAAGCTACTCAAGACCAAGACTGAGGCACCTAC...GCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp ATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGGTAGACATGCTCTTGTaGGGATGTCTTCCGACAGAG +
Preference number: 5 (lower is better)
Translates to: IQQLAYLRCIWQIPGQSQVDMLL*GCLPTE
Trigger: CTCTGTCGGAAGACATCCCAACAAGAGCATGTCTAC...CTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGGTAGACATGCTCTTGTaGGGATGTCTTCCGACAGAG +
Preference number: 5 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWVDMLL*GCLPTE
Trigger: CTCTGTCGGAAGACATCCCAACAAGAGCATGTCTAC...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp TTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGCCACTTGCGAAGTTCGTAGACATGCTCTaGTTGGGATGTCTTCCGACA +
Preference number: 5 (lower is better)
Translates to: LLPRFWEVGSSLEQPLAKFVDML*LGCLPT
Trigger: TGTCGGAAGACATCCCAACAAGAGCATGTCTACGAA...CTTCGCAAGTGGCTGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCCCTCAGCAGCTGGCTTACTaGAGATGCATCTGGCAAATT +
Preference number: 5 (lower is better)
Translates to: RNDPGYSWSSELAELSLPQQLAY*RCIWQI
Trigger: AATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTG...AGGGAGGCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp TGTGTCCAGCAGGCGGGCGTAGTTGCCATTGATCTGGGCGATGATCTGGTACTCTTTCCACTGAGCCACTaGAGACACATATTCCCATTA +
Preference number: 5 (lower is better)
Translates to: CVQQAGVVAIDLGDDLVLFPLSH*RHIFPL
Trigger: TAATGGGAATATGTGTCTCAAGTGGCTCAGTGGAAA...GAGTACCAGATCATCGCCCAGATCAATGGCAACTACGCCCGCCTGCTGGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651578.1
CDS-3UTR CAA 90 bp CTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCACTTATCTCTCACGACTaGGTTGCCATCAGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LIRVVVAQILGSWLITGALISHD*VAIRSL
Trigger: CAGACTCCTGATGGCAACCAAGTCGTGAGAGATAAG...TGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCCTTAGGGTTGCTACTTaGATGGGTTCCTGGTTATTA +
Preference number: 5 (lower is better)
Translates to: LVFREEYQKPPAEILEGPLRVAT*MGSWLL
Trigger: TAATAACCAGGAACCCATCAAAGTAGCAACCCTAAG...GGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTGTTTCTCCAGAGTCGTaGGCCTCTCTGGCATGTGCC +
Preference number: 5 (lower is better)
Translates to: KLNSVCRHDDQVLVLWASVSPES*ASLACA
Trigger: GGCACATGCCAGAGAGGCCAACGACTCTGGAGAAAC...AGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GAGGAGTACCAGAAGCCCCCGGCAGAGATACTAGAAGGGCCCAGAGCCAAATCCATGATTAGATATTTATaGAGCACCAGGAGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: EEYQKPPAEILEGPRAKSMIRYL*STRRES
Trigger: TGACTCTCTCCTGGTGCTCAATAAATATCTAATCAT...GGATTTGGCTCTGGGCCCTTCTAGTATCTCTGCCGGGGGCTTCTGGTACTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
CDS-3UTR CAA 90 bp AAGTTGAATAGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTCTCCAGGGTGCTCAATaGGAGGGATACATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KLNSVCRHDDQVLVLWASLQGAQ*EGYISW
Trigger: CCAGGAGATGTATCCCTCCAATTGAGCACCCTGGAG...AGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACTATTCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GGCATCTTCCCTCTGGTATTTAGAGAGGAGTACCAGAAGCCCCCGGCAGAGATACTTAGGGTTGCTACTTaGATGGGTTCCTGGTTATTA +
Preference number: 5 (lower is better)
Translates to: GIFPLVFREEYQKPPAEILRVAT*MGSWLL
Trigger: TAATAACCAGGAACCCATCAAAGTAGCAACCCTAAG...TATCTCTGCCGGGGGCTTCTGGTACTCCTCTCTAAATACCAGAGGGAAGATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp TTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGCTTAGGGTTGCTACTTaGATGGGTTCCTGGTTATTA +
Preference number: 5 (lower is better)
Translates to: FALSGQKLIIQRNCVQQALRVAT*MGSWLL
Trigger: TAATAACCAGGAACCCATCAAAGTAGCAACCCTAAG...CGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCTCCCTAGCTTTGAGGAGTCTTaGACCACAAACTTCACAATG +
Preference number: 5 (lower is better)
Translates to: RNDPGYSWSSELAELSLPSFEES*TTNFTM
Trigger: CATTGTGAAGTTTGTGGTCAAAGACTCCTCAAAGCT...AGGGAGGCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGAAAGAGAAATGATCCTGGATATAGCTGGTCCTCTGAGCTGGCAGAGCTGAGCCAGCAGCTGGCTTACTaGAGATGCATCTGGCAAATT +
Preference number: 5 (lower is better)
Translates to: RKRNDPGYSWSSELAELSQQLAY*RCIWQI
Trigger: AATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTG...GCTCAGCTCTGCCAGCTCAGAGGACCAGCTATATCCAGGATCATTTCTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AAACTCATAATCCAGAGGAACTGTGTCCAGCAGGCGGGCGTAGTTGCCATTGATCAGCAGCTGGCTTACTaGAGATGCATCTGGCAAATT +
Preference number: 5 (lower is better)
Translates to: KLIIQRNCVQQAGVVAIDQQLAY*RCIWQI
Trigger: AATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTG...ATCAATGGCAACTACGCCCGCCTGCTGGACACAGTTCCTCTGGATTATGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp TTAACAGACACTTTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTTGTCACTGTGGGCTaGGAGACAGAGAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: LTDTFALSGQKLIIQRNCVVTVG*ETESFW
Trigger: CCAGAAACTCTCTGTCTCCAAGCCCACAGTGACAAC...ACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAAAGTGTCTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp GAGCCAAATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCACTTAGGGTTGCTACTTaGATGGGTTCCTGGTTATTA +
Preference number: 5 (lower is better)
Translates to: EPNPAAGLLEMHLANSRALRVAT*MGSWLL
Trigger: TAATAACCAGGAACCCATCAAAGTAGCAACCCTAAG...TGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGATTTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp AGTGTCTGTAGGCATGATGACCAAGTCCTAGTGCTATGGGCATCTTCCCTCTGGAGCTTTGAGGAGTCTTaGACCACAAACTTCACAATG +
Preference number: 5 (lower is better)
Translates to: SVCRHDDQVLVLWASSLWSFEES*TTNFTM
Trigger: CATTGTGAAGTTTGTGGTCAAAGACTCCTCAAAGCT...CCAGAGGGAAGATGCCCATAGCACTAGGACTTGGTCATCATGCCTACAGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp ATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGAGCTTTGAGGAGTCTTaGACCACAAACTTCACAATG +
Preference number: 5 (lower is better)
Translates to: IQQLAYLRCIWQIPGQSQSFEES*TTNFTM
Trigger: CATTGTGAAGTTTGTGGTCAAAGACTCCTCAAAGCT...CTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTTGGCTCATCACTGGAGCAGGCAAGATGCCAAAGTaGAATAGTGTCTGTAGGCAT +
Preference number: 5 (lower is better)
Translates to: LIRVVVAQILGSWLITGAGKMPK*NSVCRH
Trigger: ATGCCTACAGACACTATTCAACTTTGGCATCTTGCC...TGCTCCAGTGATGAGCCAACTTCCCAGAATCTGGGCAACAACTACTCTGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp CAATTAATTATCAGGATCCTACCACCCAGGGATTCTGGAAGCAGAAGGCAGATGTTCGTAGACATGCTCTaGTTGGGATGTCTTCCGACA +
Preference number: 5 (lower is better)
Translates to: QLIIRILPPRDSGSRRQMFVDML*LGCLPT
Trigger: TGTCGGAAGACATCCCAACAAGAGCATGTCTACGAA...CATCTGCCTTCTGCTTCCAGAATCCCTGGGTGGTAGGATCCTGATAATTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CAA 90 bp CTCCTGTCCTATGCAGGGCTCATCAGAGTAGTTGTTGCCCAGATTCTGGGAAGTGATCTAAATTATCCTTaGTGTTCAGAGGGCCAAAAC +
Preference number: 5 (lower is better)
Translates to: LLSYAGLIRVVVAQILGSDLNYP*CSEGQN
Trigger: GTTTTGGCCCTCTGAACACAAAGGATAATTTAGATC...ACTTCCCAGAATCTGGGCAACAACTACTCTGATGAGCCCTGCATAGGACAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS-3UTR CAA 90 bp CTAGGCAATTATGTCAGCAGATCCTGGCCTAATGGGGCATTTTTAACAGACACTCAGCAGCTGGCTTACTaGAGATGCATCTGGCAAATT +
Preference number: 5 (lower is better)
Translates to: LGNYVSRSWPNGAFLTDTQQLAY*RCIWQI
Trigger: AATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTG...AGTGTCTGTTAAAAATGCCCCATTAGGCCAGGATCTGCTGACATAATTGCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS-3UTR CAA 90 bp ATCCAGCAGCTGGCTTACTTGAGATGCATCTGGCAAATTCCAGGGCAAAGCCAGATGATTAGATATTTATaGAGCACCAGGAGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: IQQLAYLRCIWQIPGQSQMIRYL*STRRES
Trigger: TGACTCTCTCCTGGTGCTCAATAAATATCTAATCAT...CTGGCTTTGCCCTGGAATTTGCCAGATGCATCTCAAGTAAGCCAGCTGCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374737.9
ENST00000455586.6
CDS-3UTR CAA 90 bp ACTTTTGCCCTCAGTGGCCAGAAACTCATAATCCAGAGGAACTGTGTCCAGCAGATGATTAGATATTTATaGAGCACCAGGAGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: TFALSGQKLIIQRNCVQQMIRYL*STRRES
Trigger: TGACTCTCTCCTGGTGCTCAATAAATATCTAATCAT...CTGCTGGACACAGTTCCTCTGGATTATGAGTTTCTGGCCACTGAGGGCAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS CCA 72 bp ACTCCCAGCGGCTCCAGTGTTGGTAGGCGGACACTTTaGGCTGGCTGCTTCGTAGACATGCTCTTGTTGGGA +
Preference number: 6 (lower is better)
Translates to: TPSGSSVGRRTL*AGCFVDMLLLG
Trigger: TCCCAACAAGAGCATGTCTACGAAGCAGCCAGCCCAAAGTGTCCGCCTACCAACACTGGAGCCGCTGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427538.5
CDS CCA 72 bp CCAGCCTCCTGCTACCAAAGAGGCTCAAACTTCTGGTaGCCGCCAGCGTCTGTGACTGCTTACTTCCCTTCC +
Preference number: 6 (lower is better)
Translates to: PASCYQRGSNFW*PPASVTAYFPS
Trigger: GGAAGGGAAGTAAGCAGTCACAGACGCTGGCGGCCACCAGAAGTTTGAGCCTCTTTGGTAGCAGGAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS GCA 72 bp TGGAGGGATACATCTCCTGGAACCTTGTGGCTCACATaGAGGCGGCCCTGGTACTTTGCCTGCTGGATATGG +
Preference number: 6 (lower is better)
Translates to: WRDTSPGTLWLT*RRPWYFACWIW
Trigger: CCATATCCAGCAGGCAAAGTACCAGGGCCGCCTGCATGTGAGCCACAAGGTTCCAGGAGATGTATCCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CCA 72 bp CATCTCCAGGGTGCTCAATTGGAGGGATACATCTCCTaGAACCTTGTGGCTCACATGCAGGCGGCCCTGGTA +
Preference number: 6 (lower is better)
Translates to: HLQGAQLEGYIS*NLVAHMQAALV
Trigger: TACCAGGGCCGCCTGCATGTGAGCCACAAGGTTCCAGGAGATGTATCCCTCCAATTGAGCACCCTGGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CCA 72 bp CTTCCAGCCTCCTGCTACCAAAGAGGCTCAAACTTCTaGTGGCCGCCAGCGTCTGTGACTGCTTACTTCCCT +
Preference number: 6 (lower is better)
Translates to: LPASCYQRGSNF*WPPASVTAYFP
Trigger: AGGGAAGTAAGCAGTCACAGACGCTGGCGGCCACCAGAAGTTTGAGCCTCTTTGGTAGCAGGAGGCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455586.6
ENST00000651578.1
CDS CAA 72 bp AGGGTGCTCAATTGGAGGGATACATCTCCTGGAACCTaGTGGCTCACATGCAGGCGGCCCTGGTACTTTGCC +
Preference number: 6 (lower is better)
Translates to: RVLNWRDTSPGT*WLTCRRPWYFA
Trigger: GGCAAAGTACCAGGGCCGCCTGCATGTGAGCCACAAGGTTCCAGGAGATGTATCCCTCCAATTGAGCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 90 bp TTCACACGTGTAGTGGCTCCGGTCATCCATCTCCAGGGTGCTCAATaGGAGGGATACATCTCCTGGAACCTTGTGGCTCACATGCAGGCG +
Preference number: 6 (lower is better)
Translates to: FTRVVAPVIHLQGAQ*EGYISWNLVAHMQA
Trigger: CGCCTGCATGTGAGCCACAAGGTTCCAGGAGATGTATCCCTCCAATTGAGCACCCTGGAGATGGATGACCGGAGCCACTACACGTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS TCA 72 bp CTCTCACGACTTGGTTGCCATCAGGAGTCTGCCAGGTaGCTTCACACGTGTAGTGGCTCCGGTCATCCATCT +
Preference number: 6 (lower is better)
Translates to: LSRLGCHQESAR*LHTCSGSGHPS
Trigger: AGATGGATGACCGGAGCCACTACACGTGTGAAGTCACCTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS GCA 72 bp CAGCCAGAGCTACTTCTGTCCTTTCTTCCAGCCTCCTaGTACCAAAGAGGCTCAAACTTCTGGTGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: QPELLLSFLPAS*YQRGSNFWWPP
Trigger: TGGCGGCCACCAGAAGTTTGAGCCTCTTTGGTAGCAGGAGGCTGGAAGAAAGGACAGAAGTAGCTCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374737.9
ENST00000455586.6
ENST00000651578.1
CDS GCA 72 bp GAGGAGTCTTTGACCACAAACTTCACAATGTCGCTGTaGTGCTCAGAGCCAACCTGGCCCTTGGCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: EESLTTNFTMSL*CSEPTWPLAVQ
Trigger: CTGCACTGCCAAGGGCCAGGTTGGCTCTGAGCAGCACAGCGACATTGTGAAGTTTGTGGTCAAAGACTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 72 bp GAACCTTGTGGCTCACATGCAGGCGGCCCTGGTACTTaGCCTGCTGGATATGGTCTCCAGAAGAGTCACGTA +
Preference number: 6 (lower is better)
Translates to: EPCGSHAGGPGT*PAGYGLQKSHV
Trigger: TACGTGACTCTTCTGGAGACCATATCCAGCAGGCAAAGTACCAGGGCCGCCTGCATGTGAGCCACAAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS CAA 72 bp GTAGTGGCTCCGGTCATCCATCTCCAGGGTGCTCAATaGGAGGGATACATCTCCTGGAACCTTGTGGCTCAC +
Preference number: 6 (lower is better)
Translates to: VVAPVIHLQGAQ*EGYISWNLVAH
Trigger: GTGAGCCACAAGGTTCCAGGAGATGTATCCCTCCAATTGAGCACCCTGGAGATGGATGACCGGAGCCACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 90 bp CATCTCCTGGAACCTTGTGGCTCACATGCAGGCGGCCCTGGTACTTaGCCTGCTGGATATGGTCTCCAGAAGAGTCACGTAGAAAGATGG +
Preference number: 6 (lower is better)
Translates to: HLLEPCGSHAGGPGT*PAGYGLQKSHVERW
Trigger: CCATCTTTCTACGTGACTCTTCTGGAGACCATATCCAGCAGGCAAAGTACCAGGGCCGCCTGCATGTGAGCCACAAGGTTCCAGGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS GCA 72 bp TTGTGGCTCACATGCAGGCGGCCCTGGTACTTTGCCTaGTGGATATGGTCTCCAGAAGAGTCACGTAGAAAG +
Preference number: 6 (lower is better)
Translates to: LWLTCRRPWYFA*WIWSPEESRRK
Trigger: CTTTCTACGTGACTCTTCTGGAGACCATATCCAGCAGGCAAAGTACCAGGGCCGCCTGCATGTGAGCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS GCA 72 bp CACACGTGTAGTGGCTCCGGTCATCCATCTCCAGGGTaGTCAATTGGAGGGATACATCTCCTGGAACCTTGT +
Preference number: 6 (lower is better)
Translates to: HTCSGSGHPSPG*SIGGIHLLEPC
Trigger: ACAAGGTTCCAGGAGATGTATCCCTCCAATTGAGCACCCTGGAGATGGATGACCGGAGCCACTACACGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS GCA 72 bp GAGTCTTTGACCACAAACTTCACAATGTCGCTGTGCTaGTCAGAGCCAACCTGGCCCTTGGCAGTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: ESLTTNFTMSLC*SEPTWPLAVQK
Trigger: TTTCTGCACTGCCAAGGGCCAGGTTGGCTCTGAGCAGCACAGCGACATTGTGAAGTTTGTGGTCAAAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 72 bp AATATAACTGATGGGAGGAGAACCCCGAGCCTGGCATaGAAGGCTAATCCTCATTCCCTGGGGCACCGTGAA +
Preference number: 6 (lower is better)
Translates to: NITDGRRTPSLA*KANPHSLGHRE
Trigger: TTCACGGTGCCCCAGGGAATGAGGATTAGCCTTCAATGCCAGGCTCGGGGTTCTCCTCCCATCAGTTATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 90 bp CTTATACCAAATATAACTGATGGGAGGAGAACCCCGAGCCTGGCATaGAAGGCTAATCCTCATTCCCTGGGGCACCGTGAAGCCATAACC +
Preference number: 6 (lower is better)
Translates to: LIPNITDGRRTPSLA*KANPHSLGHREAIT
Trigger: GGTTATGGCTTCACGGTGCCCCAGGGAATGAGGATTAGCCTTCAATGCCAGGCTCGGGGTTCTCCTCCCATCAGTTATATTTGGTATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 90 bp GGAGTGTTTCTGGACACGGAGCTCAGTAATCTTATCTCTCACGACTaGGTTGCCATCAGGAGTCTGCCAGGTGACTTCACACGTGTAGTG +
Preference number: 6 (lower is better)
Translates to: GVFLDTELSNLISHD*VAIRSLPGDFTRVV
Trigger: CACTACACGTGTGAAGTCACCTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAGATAAGATTACTGAGCTCCGTGTCCAGAAACACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412866.2
CDS CAA 90 bp GGTAGGCGGACACTTTGGGCTGGCTGCTTCGTAGACATGCTCTTGTaGGGATGTCTTCCGACAGAGCATGATATAGGCCATGGTAAAAAC +
Preference number: 6 (lower is better)
Translates to: GRRTLWAGCFVDMLL*GCLPTEHDIGHGKN
Trigger: GTTTTTACCATGGCCTATATCATGCTCTGTCGGAAGACATCCCAACAAGAGCATGTCTACGAAGCAGCCAGCCCAAAGTGTCCGCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427538.5
CDS TCA 72 bp GGATATGGTCTCCAGAAGAGTCACGTAGAAAGATGGTaGCAGGGTCTGAGCCACGTTGTACCAGCCACTTCA +
Preference number: 6 (lower is better)
Translates to: GYGLQKSHVERW*QGLSHVVPATS
Trigger: TGAAGTGGCTGGTACAACGTGGCTCAGACCCTGTCACCATCTTTCTACGTGACTCTTCTGGAGACCATATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000455586.6
ENST00000651578.1
CDS TCA 72 bp AAAGAGGCTCAAACTTCTGGTGGCCGCCAGCGTCTGTaGCTGCTTACTTCCCTTCCTTCCCTATATCTCTCA +
Preference number: 6 (lower is better)
Translates to: KEAQTSGGRQRL*LLTSLPSLYLS
Trigger: TGAGAGATATAGGGAAGGAAGGGAAGTAAGCAGTCACAGACGCTGGCGGCCACCAGAAGTTTGAGCCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455586.6
CDS CCA 72 bp TGGACACGGAGCTCAGTAATCTTATCTCTCACGACTTaGTTGCCATCAGGAGTCTGCCAGGTGACTTCACAC +
Preference number: 6 (lower is better)
Translates to: WTRSSVILSLTT*LPSGVCQVTSH
Trigger: GTGTGAAGTCACCTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAGATAAGATTACTGAGCTCCGTGTCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 72 bp ACACGGAGCTCAGTAATCTTATCTCTCACGACTTGGTaGCCATCAGGAGTCTGCCAGGTGACTTCACACGTG +
Preference number: 6 (lower is better)
Translates to: TRSSVILSLTTW*PSGVCQVTSHV
Trigger: CACGTGTGAAGTCACCTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAGATAAGATTACTGAGCTCCGTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 72 bp CTGGACACGGAGCTCAGTAATCTTATCTCTCACGACTaGGTTGCCATCAGGAGTCTGCCAGGTGACTTCACA +
Preference number: 6 (lower is better)
Translates to: LDTELSNLISHD*VAIRSLPGDFT
Trigger: TGTGAAGTCACCTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAGATAAGATTACTGAGCTCCGTGTCCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374737.9
ENST00000412866.2
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 72 bp GGGTATGTCATGGTTGTAGGTGCCTCAGTCTTGGTCTaGAGTAGCTTTGAGGAGTGTTTCTGGACACGGAGC +
Preference number: 6 (lower is better)
Translates to: GYVMVVGASVLV*SSFEECFWTRS
Trigger: GCTCCGTGTCCAGAAACACTCCTCAAAGCTACTCAAGACCAAGACTGAGGCACCTACAACCATGACATACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412866.2
CDS CAA 90 bp AGAGAGTTTCTGGACACGGAGCTCAGTAATCTTATCTCTCACGACTaGGTTGCCATCAGGAGTCTGCCAGGTGACTTCACACGTGTAGTG +
Preference number: 6 (lower is better)
Translates to: REFLDTELSNLISHD*VAIRSLPGDFTRVV
Trigger: CACTACACGTGTGAAGTCACCTGGCAGACTCCTGATGGCAACCAAGTCGTGAGAGATAAGATTACTGAGCTCCGTGTCCAGAAACTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 72 bp ACACTTTGGGCTGGCTGCTTCGTAGACATGCTCTTGTaGGGATGTCTTCCGACAGAGCATGATATAGGCCAT +
Preference number: 6 (lower is better)
Translates to: TLWAGCFVDMLL*GCLPTEHDIGH
Trigger: ATGGCCTATATCATGCTCTGTCGGAAGACATCCCAACAAGAGCATGTCTACGAAGCAGCCAGCCCAAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427538.5
CDS CAA 90 bp GATGTTGCTTTCAAGGGGTATGTCATGGTTGTAGGTGCCTCAGTCTaGGTCTTGAGTAGCTTTGAGGAGTGTTTCTGGACACGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: DVAFKGYVMVVGASV*VLSSFEECFWTRSS
Trigger: TGAGCTCCGTGTCCAGAAACACTCCTCAAAGCTACTCAAGACCAAGACTGAGGCACCTACAACCATGACATACCCCTTGAAAGCAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412866.2
CDS CAA 72 bp GGGTATGTCATGGTTGTAGGTGCCTCAGTCTTGGTCTaGAGTAGCTTTGAGGAGTCTTTGACCACAAACTTC +
Preference number: 6 (lower is better)
Translates to: GYVMVVGASVLV*SSFEESLTTNF
Trigger: GAAGTTTGTGGTCAAAGACTCCTCAAAGCTACTCAAGACCAAGACTGAGGCACCTACAACCATGACATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 72 bp TTCAAGGGGTATGTCATGGTTGTAGGTGCCTCAGTCTaGGTCTTGAGTAGCTTTGAGGAGTCTTTGACCACA +
Preference number: 6 (lower is better)
Translates to: FKGYVMVVGASV*VLSSFEESLTT
Trigger: TGTGGTCAAAGACTCCTCAAAGCTACTCAAGACCAAGACTGAGGCACCTACAACCATGACATACCCCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 72 bp TTCAAGGGGTATGTCATGGTTGTAGGTGCCTCAGTCTaGGTCTTGAGTAGCTTTGAGGAGTGTTTCTGGACA +
Preference number: 6 (lower is better)
Translates to: FKGYVMVVGASV*VLSSFEECFWT
Trigger: TGTCCAGAAACACTCCTCAAAGCTACTCAAGACCAAGACTGAGGCACCTACAACCATGACATACCCCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412866.2
CDS CAA 90 bp GATGTTGCTTTCAAGGGGTATGTCATGGTTGTAGGTGCCTCAGTCTaGGTCTTGAGTAGCTTTGAGGAGTCTTTGACCACAAACTTCACA +
Preference number: 6 (lower is better)
Translates to: DVAFKGYVMVVGASV*VLSSFEESLTTNFT
Trigger: TGTGAAGTTTGTGGTCAAAGACTCCTCAAAGCTACTCAAGACCAAGACTGAGGCACCTACAACCATGACATACCCCTTGAAAGCAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1
CDS CAA 72 bp GGTTGCTACTTTGATGGGTTCCTGGTTATTAGTCTGTaGCTTATACCAAATATAACTGATGGGAGGAGAACC +
Preference number: 6 (lower is better)
Translates to: GCYFDGFLVISL*LIPNITDGRRT
Trigger: GGTTCTCCTCCCATCAGTTATATTTGGTATAAGCAACAGACTAATAACCAGGAACCCATCAAAGTAGCAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374737.9
ENST00000427538.5
ENST00000455586.6
ENST00000651578.1