RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS4A (Homo sapiens)

Ensembl gene IDs: ENSG00000132612

Ensembl transcript IDs: ENST00000254950.13, ENST00000562754.1, ENST00000564399.1, ENST00000566354.1

Found 356 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACTGCCTGCCGGACGTGGGTCCAGGGCTGCCAGCTCTGGGTCCTTaGTCTGTTGGGGGTCGCAAACTGAAATGGCCATGGGGCTATCTG +
Preference number: 1 (lower is better)
Translates to: HCLPDVGPGLPALGP*SVGGRKLKWPWGYL
Trigger: CAGATAGCCCCATGGCCATTTCAGTTTGCGACCCCCAACAGACCAAGGACCCAGAGCTGGCAGCCCTGGACCCACGTCCGGCAGGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 90 bp TCTGGCTCCCTGGCAGACGGCCAGACAGCAGAGGGAACTCTGTATTaGCTGGGACAAGCCCTGGAGCCCTGTCTGGCTGTTGACATGGGG +
Preference number: 1 (lower is better)
Translates to: SGSLADGQTAEGTLY*LGQALEPCLAVDMG
Trigger: CCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTCCCTCTGCTGTCTGGCCGTCTGCCAGGGAGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR GCA 90 bp GCCCTGGAGCCCTGTCTGGCTGTTGACATGGGGAGTGCCTGGATTTaGCCCAATCAACCTCCCACCTTCACCATTGCCCAAGTGAAGCAG +
Preference number: 1 (lower is better)
Translates to: ALEPCLAVDMGSAWI*PNQPPTFTIAQVKQ
Trigger: CTGCTTCACTTGGGCAATGGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CCA 90 bp ACGGCCAGACAGCAGAGGGAACTCTGTATTGACTGGGACAAGCCCTaGAGCCCTGTCTGGCTGTTGACATGGGGAGTGCCTGGATTTGCC +
Preference number: 1 (lower is better)
Translates to: TARQQRELCIDWDKP*SPVWLLTWGVPGFA
Trigger: GGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTCCCTCTGCTGTCTGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 90 bp GCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACTTTGCAGTCTCTaGTCTGTAGGCCGAACAACGGCAAGAACTGTCTGGATCCCACAA +
Preference number: 1 (lower is better)
Translates to: AAGRVWYAGLPLCSL*SVGRTTARTVWIPQ
Trigger: TTGTGGGATCCAGACAGTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CCA 90 bp TGTATTGACTGGGACAAGCCCTGGAGCCCTGTCTGGCTGTTGACATaGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCTTCACCA +
Preference number: 1 (lower is better)
Translates to: CIDWDKPWSPVWLLT*GVPGFAPINLPPSP
Trigger: TGGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CCA 90 bp CAGAGGGAACTCTGTATTGACTGGGACAAGCCCTGGAGCCCTGTCTaGCTGTTGACATGGGGAGTGCCTGGATTTGCCCCAATCAACCTC +
Preference number: 1 (lower is better)
Translates to: QRELCIDWDKPWSPV*LLTWGVPGFAPINL
Trigger: GAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 90 bp AACTCTGTATTGACTGGGACAAGCCCTGGAGCCCTGTCTGGCTGTTaGCATGGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCTT +
Preference number: 1 (lower is better)
Translates to: NSVLTGTSPGALSGC*HGECLDLPQSTSHL
Trigger: AAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 90 bp GAGGAAGAAAAGGCAGTGGTGAACACCCGCCTGACTGCCTTACCCTaGTCTAAACGACACCATCTCCTCCCCCAAGGAAGACACAGCCCT +
Preference number: 1 (lower is better)
Translates to: EEEKAVVNTRLTALP*SKRHHLLPQGRHSP
Trigger: AGGGCTGTGTCTTCCTTGGGGGAGGAGATGGTGTCGTTTAGATCAGGGTAAGGCAGTCAGGCGGGTGTTCACCACTGCCTTTTCTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 90 bp CGGCAAGAACTGTCTGGATCCCACAAACATCCCCAGCCAAACTTCTaGGGCCTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACA +
Preference number: 1 (lower is better)
Translates to: RQELSGSHKHPQPNF*GLKGRRPCTPDWRT
Trigger: TGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAGGCCTCAGAAGTTTGGCTGGGGATGTTTGTGGGATCCAGACAGTTCTTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 90 bp CTTACACAAGCACCCCCAAGCCACAAAGATCCCAGCTGCTATGGTTaGGGGGTAACCTGCCAGCACTGGAGCCAAGTGTTGGAGCTACTG +
Preference number: 1 (lower is better)
Translates to: LTQAPPSHKDPSCYG*GVTCQHWSQVLELL
Trigger: CAGTAGCTCCAACACTTGGCTCCAGTGCTGGCAGGTTACCCCTCAACCATAGCAGCTGGGATCTTTGTGGCTTGGGGGTGCTTGTGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CCA 90 bp GCTGGCAGCCAGAGTCTGAGGCCACTGTCCAAAGTTCAGCGTCAGTaGTTCCTGTTGCTGGTCATGGAGAGAGACAACTGGAAAGTCAGG +
Preference number: 1 (lower is better)
Translates to: AGSQSLRPLSKVQRQ*FLLLVMERDNWKVR
Trigger: CCTGACTTTCCAGTTGTCTCTCTCCATGACCAGCAACAGGAACCACTGACGCTGAACTTTGGACAGTGGCCTCAGACTCTGGCTGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CCA 90 bp AGAACTTACACAAGCACCCCCAAGCCACAAAGATCCCAGCTGCTATaGTTGAGGGGTAACCTGCCAGCACTGGAGCCAAGTGTTGGAGCT +
Preference number: 1 (lower is better)
Translates to: RTYTSTPKPQRSQLL*LRGNLPALEPSVGA
Trigger: AGCTCCAACACTTGGCTCCAGTGCTGGCAGGTTACCCCTCAACCATAGCAGCTGGGATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 90 bp TGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCAGCCAGAGTCTaGGGCCACTGTCCAAAGTTCAGCGTCAGTGGTTCCTGTTGCTGG +
Preference number: 1 (lower is better)
Translates to: CLTSMMAGCVLAARV*GHCPKFSVSGSCCW
Trigger: CCAGCAACAGGAACCACTGACGCTGAACTTTGGACAGTGGCCTCAGACTCTGGCTGCCAGCACACAACCTGCCATCATCGATGTTAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR GCA 90 bp CTGGAGCCAAGTGTTGGAGCTACTGATCCAAAGTTAGCTCACTTCTaGAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCC +
Preference number: 1 (lower is better)
Translates to: LEPSVGATDPKLAHF*RGSEPEQRNGPVQA
Trigger: GGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTGAGCTAACTTTGGATCAGTAGCTCCAACACTTGGCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CCA 90 bp GTTCAGCGTCAGTGGTTCCTGTTGCTGGTCATGGAGAGAGACAACTaGAAAGTCAGGTGTCTTCACGCTCTAACTAGAGCACAGGGATGG +
Preference number: 1 (lower is better)
Translates to: VQRQWFLLLVMERDN*KVRCLHALTRAQGW
Trigger: CCATCCCTGTGCTCTAGTTAGAGCGTGAAGACACCTGACTTTCCAGTTGTCTCTCTCCATGACCAGCAACAGGAACCACTGACGCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 90 bp CTCACTAAAGTGAAGCTCTGCAGACACGGTTCATATCCTGGTGGCTaGGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACA +
Preference number: 1 (lower is better)
Translates to: LTKVKLCRHGSYPGG*GHITKNLHKHPQAT
Trigger: TGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCACCAGGATATGAACCGTGTCTGCAGAGCTTCACTTTAGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 90 bp AGCAAGGGTGGCCCTTCAGAGTCTCAGTTAAGAGTCAAGGAAAGATaGGATCACTTGGGTAGCTCAAGAAGGGAAAAGGATTTATTAGAC +
Preference number: 1 (lower is better)
Translates to: SKGGPSESQLRVKER*DHLGSSRREKDLLD
Trigger: GTCTAATAAATCCTTTTCCCTTCTTGAGCTACCCAAGTGATCTCATCTTTCCTTGACTCTTAACTGAGACTCTGAAGGGCCACCCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp GAAGAGCAGTGTCCACTGTGTGCCCCAGGGCAGTGGAGTGTCTCTGTGGCTGCAGACTGGGACAAGCCCTaGAGCCCTGTCTGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: EEQCPLCAPGQWSVSVAADWDKP*SPVWLL
Trigger: CAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTC...TGCAGCCACAGAGACACTCCACTGCCCTGGGGCACACAGTGGACACTGCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp GGATGGGGGACCCCTTCTGTACAGAGCAGCCTCTACTTAGTGGCCGCTGACAGGCCCAGGGGCAGTGGCTaGGTTCAGTGTTCTCACGCT +
Preference number: 2 (lower is better)
Translates to: GWGTPSVQSSLYLVAADRPRGSG*VQCSHA
Trigger: AGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGG...CCTGTCAGCGGCCACTAAGTAGAGGCTGCTCTGTACAGAAGGGGTCCCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACTTCCTTCTGGCTCCCTaGCAGACGGCCAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHFLLAP*QTARQQ
Trigger: CTGCTGTCTGGCCGTCTGCCAGGGAGCCAGAAGGAA...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR GCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGACGTGGGTCCAGGGCTaGCAGCTCTGGGTCCTTGGT +
Preference number: 2 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQTWVQG*QLWVLG
Trigger: ACCAAGGACCCAGAGCTGGCAGCCCTGGACCCACGT...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp GAAGAGCAGTGTCCACTGTGTGCCCCAGGGCAGTGGAGTGTCTCTGTGGCTGCAGTCTGGCTGTTGACATaGGGAGTGCCTGGATTTGCC +
Preference number: 2 (lower is better)
Translates to: EEQCPLCAPGQWSVSVAAVWLLT*GVPGFA
Trigger: GGCAAATCCAGGCACTCCCCATGTCAACAGCCAGAC...TGCAGCCACAGAGACACTCCACTGCCCTGGGGCACACAGTGGACACTGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGGCTGCAGGACGGGTCTaGTACGCAGGGCTCCCACTT +
Preference number: 2 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQAAGRV*YAGLPL
Trigger: AAGTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGC...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGGCCCTGTCTGGCTGTTaGCATGGGGAGTGCCTGGAT +
Preference number: 2 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQALSGC*HGECLD
Trigger: ATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGC...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR GCA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTACCTGGCAGCACGGCTaGTTCTCCCCCGCCACCCCG +
Preference number: 2 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESTWQHG*FSPATP
Trigger: CGGGGTGGCGGGGGAGAAGCAGCCGTGCTGCCAGGT...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR GCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACAAGGGGAGGAGGCCTTaGACACCTGACTGGAGAACA +
Preference number: 2 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHKGRRP*TPDWRT
Trigger: TGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTT...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGTGTGCCCCAGGGCAGTaGAGTGTCTCTGTGGCTGCA +
Preference number: 2 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQCAPGQ*SVSVAA
Trigger: TGCAGCCACAGAGACACTCCACTGCCCTGGGGCACA...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CAA 90 bp GAACTCTGTATTGACTGGGACAAGCCCTGGAGCCCTGTCTGGCTGTaGACATGGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCT +
Preference number: 2 (lower is better)
Translates to: ELCIDWDKPWSPVWL*TWGVPGFAPINLPP
Trigger: AGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CAA 90 bp AACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACTTaGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACTGTCTG +
Preference number: 2 (lower is better)
Translates to: NKHSCRTGLVRRAPT*QSLICRPNNGKNCL
Trigger: CAGACAGTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CAA 90 bp ACTTACACAAGCACCCCCAAGCCACAAAGATCCCAGCTGCTATGGTaGAGGGGTAACCTGCCAGCACTGGAGCCAAGTGTTGGAGCTACT +
Preference number: 2 (lower is better)
Translates to: TYTSTPKPQRSQLLW*RGNLPALEPSVGAT
Trigger: AGTAGCTCCAACACTTGGCTCCAGTGCTGGCAGGTTACCCCTCAACCATAGCAGCTGGGATCTTTGTGGCTTGGGGGTGCTTGTGTAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp CACAGTGAAAGCCAATGTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAGGCAGGCAACACAGATaGGTGGGGATGGGGGACCCC +
Preference number: 2 (lower is better)
Translates to: HSESQCRQKVYNRIPRQRGRQHR*VGMGDP
Trigger: GGGGTCCCCCATCCCCACTCATCTGTGTTGCCTGCC...TCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTACATTGGCTTTCACTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR GCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACGGGCATCAGCCAATCTaGTCTCAAGGAGCAAAACTT +
Preference number: 2 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHGHQPI*SQGAKL
Trigger: AAGTTTTGCTCCTTGAGAGCAGATTGGCTGATGCCC...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACAGAGGGTCTTTTAATTaGAAGCAAGGGTGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHRGSFN*KQGWPF
Trigger: GAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCT...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCACTGACTGCCTTACCCTaGTCTAAACGACACCATCTC +
Preference number: 2 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTALTALP*SKRHHL
Trigger: GAGATGGTGTCGTTTAGATCAGGGTAAGGCAGTCAG...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR GCA 90 bp CTTTGGTCTGTTTATATGCATGGGGTAAACGTGGGACAGCCTCTGCAGCTTCACGGGAGTGCCTGGATTTaGCCCAATCAACCTCCCACC +
Preference number: 2 (lower is better)
Translates to: LWSVYMHGVNVGQPLQLHGSAWI*PNQPPT
Trigger: GGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCC...GTGAAGCTGCAGAGGCTGTCCCACGTTTACCCCATGCATATAAACAGACCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp CACAGTGAAAGCCAATGTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGACAAGGCCCTTCCTTCTaGCTCCCTGGCAGACGGCCA +
Preference number: 2 (lower is better)
Translates to: HSESQCRQKVYNRIPRQRQGPSF*LPGRRP
Trigger: TGGCCGTCTGCCAGGGAGCCAGAAGGAAGGGCCTTG...TCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTACATTGGCTTTCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CAA 90 bp CAGAGTCTGAGGCCACTGTCCAAAGTTCAGCGTCAGTGGTTCCTGTaGCTGGTCATGGAGAGAGACAACTGGAAAGTCAGGTGTCTTCAC +
Preference number: 2 (lower is better)
Translates to: QSLRPLSKVQRQWFL*LVMERDNWKVRCLH
Trigger: GTGAAGACACCTGACTTTCCAGTTGTCTCTCTCCATGACCAGCAACAGGAACCACTGACGCTGAACTTTGGACAGTGGCCTCAGACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACAGAGTCAAGGAAAGATaGGATCACTTGGGTAGCTCA +
Preference number: 2 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNRVKER*DHLGSS
Trigger: TGAGCTACCCAAGTGATCTCATCTTTCCTTGACTCT...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATATGTTCTCGATTTCCTaGCCTTGTGATCCGCCCGCG +
Preference number: 2 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDMFSIS*PCDPPA
Trigger: CGCGGGCGGATCACAAGGTCAGGAAATCGAGAACAT...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR GCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACAACAGGCCTAAGAACTaGAGTGTTCTGTTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNNRPKN*SVLFPA
Trigger: AGCAGGAAACAGAACACTGCAGTTCTTAGGCCTGTT...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR GCA 90 bp CTTTGGTCTGTTTATATGCATGGGGTAAACGTGGGACAGCCTCTGCAGCTTCACCCAAACAAACACAGCTaGAGGACGGGTCTGGTACGC +
Preference number: 2 (lower is better)
Translates to: LWSVYMHGVNVGQPLQLHPNKHS*RTGLVR
Trigger: GCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGG...GTGAAGCTGCAGAGGCTGTCCCACGTTTACCCCATGCATATAAACAGACCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGAATTGGAAGCAAGGGTaGCCCTTCAGAGTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQNWKQG*PFRVSV
Trigger: AACTGAGACTCTGAAGGGCCACCCTTGCTTCCAATT...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATCCACTTTGCAGTCTCTaGTCTGTAGGCCGAACAACG +
Preference number: 2 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDPLCSL*SVGRTT
Trigger: CGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGG...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGCCAGGTCTTTCTGTGTaGATGTGCTTTGACTTTGGT +
Preference number: 2 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQPGLSV*MCFDFG
Trigger: ACCAAAGTCAAAGCACATTCACACAGAAAGACCTGG...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCAGAACTCTGTATTGACTaGGACAAGCCCTGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: PLHMSACLTSMMAGCVLAELCID*DKPWSP
Trigger: AGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTC...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCAGTAACCTGCCAGCACTaGAGCCAAGTGTTGGAGCTA +
Preference number: 2 (lower is better)
Translates to: PLHMSACLTSMMAGCVLAVTCQH*SQVLEL
Trigger: TAGCTCCAACACTTGGCTCCAGTGCTGGCAGGTTAC...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCAGAGGCCTTGCACACCTaGCTGGAGAACAGGCCTAAG +
Preference number: 2 (lower is better)
Translates to: VGRRFITESPGREVNFRAEALHT*LENRPK
Trigger: CTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTC...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR GCA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACGCAGTGTCCACTGTGTaGCCCAGGGCAGTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNAVSTV*PRAVEC
Trigger: ACACTCCACTGCCCTGGGGCACACAGTGGACACTGC...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCACTAGGAGGGTGGGAATaGCTTATGTCACTCGGTCTT +
Preference number: 2 (lower is better)
Translates to: PLHMSACLTSMMAGCVLALGGWE*LMSLGL
Trigger: AAGACCGAGTGACATAAGCCATTCCCACCCTCCTAG...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACTGGCAGGTTGTGTGCTaGCAGCCAGAGTCTGAGGCC +
Preference number: 2 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNWQVVC*QPESEA
Trigger: GGCCTCAGACTCTGGCTGCCAGCACACAACCTGCCA...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGGTCTGGAGGTCTGGGTaGCCTGGCAGCACGGCTGCT +
Preference number: 2 (lower is better)
Translates to: KCKLYCISSKISPTLSRKVWRSG*PGSTAA
Trigger: AGCAGCCGTGCTGCCAGGTCACCCAGACCTCCAGAC...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCAGTAAGCTCACTAAAGTaGAGCTCTGCAGACACGGTT +
Preference number: 2 (lower is better)
Translates to: PLHMSACLTSMMAGCVLAVSSLK*SSADTV
Trigger: AACCGTGTCTGCAGAGCTTCACTTTAGTGAGCTTAC...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAAGAGGTCTGGGTGACCTaGCAGCACGGCTGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: YCISSKISPTLSRKHSQKEVWVT*QHGCFS
Trigger: GGAGAAGCAGCCGTGCTGCCAGGTCACCCAGACCTC...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCAAGTGGTTCCTGTTGCTaGTCATGGAGAGAGACAACT +
Preference number: 2 (lower is better)
Translates to: PLHMSACLTSMMAGCVLASGSCC*SWRETT
Trigger: AGTTGTCTCTCTCCATGACCAGCAACAGGAACCACT...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACAGTGCAAGCCCAGTGTaGGCCAAGAGTTGGCCATGT +
Preference number: 2 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNSASPV*AKSWPC
Trigger: ACATGGCCAACTCTTGGCTCACACTGGGCTTGCACT...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR GCA 90 bp CACAGTGAAAGCCAATGTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAGTCAGTGGTTCCTGTTaGTGGTCATGGAGAGAGACA +
Preference number: 2 (lower is better)
Translates to: HSESQCRQKVYNRIPRQRVSGSC*WSWRET
Trigger: TGTCTCTCTCCATGACCAGCAACAGGAACCACTGAC...TCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTACATTGGCTTTCACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAACCCTGGAGCCCTGTCTaGCTGTTGACATGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: YCISSKISPTLSRKHSQKPWSPV*LLTWGV
Trigger: CACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGG...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCAAAGTGTTGGAGCTACTaGTCCAAAGTTAGCTCACTT +
Preference number: 2 (lower is better)
Translates to: PLHMSACLTSMMAGCVLAKCWSY*SKVSSL
Trigger: AAGTGAGCTAACTTTGGATCAGTAGCTCCAACACTT...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAACTGGCAGCCAGAGTCTaGGGCCACTGTCCAAAGTTC +
Preference number: 2 (lower is better)
Translates to: YCISSKISPTLSRKHSQKLAARV*GHCPKF
Trigger: GAACTTTGGACAGTGGCCTCAGACTCTGGCTGCCAG...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCACGGTTCATATCCTGGTaGCTGAGGGCACATAACCAA +
Preference number: 2 (lower is better)
Translates to: VGRRFITESPGREVNFRARFISW*LRAHNQ
Trigger: TTGGTTATGTGCCCTCAGCCACCAGGATATGAACCG...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CAA 90 bp CTTCATTTACTAGGCCAGGTCTTTCTGTGTGAATGTGCTTTGACTTaGGTCTGTTTATATGCATGGGGTAAACGTGGGACAGCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: LHLLGQVFLCECALT*VCLYAWGKRGTASA
Trigger: TGCAGAGGCTGTCCCACGTTTACCCCATGCATATAAACAGACCAAAGTCAAAGCACATTCACACAGAAAGACCTGGCCTAGTAAATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACCTTCTGCAGAGGCTCTaGACCAGAGCAAAGAAATGG +
Preference number: 2 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNLLQRL*TRAKKW
Trigger: CCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAG...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACTCATATCCTGGTGGCTaGGGGCACATAACCAAGAAC +
Preference number: 2 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNSYPGG*GHITKN
Trigger: GTTCTTGGTTATGTGCCCTCAGCCACCAGGATATGA...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAAAGTGGAGTGTCTCTGTaGCTGCAAGGCCCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: YCISSKISPTLSRKHSQKSGVSL*LQGPSF
Trigger: GAAGGAAGGGCCTTGCAGCCACAGAGACACTCCACT...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGGGCCATGGGGCTATCTaGGCAGGCAACACAGATGAG +
Preference number: 2 (lower is better)
Translates to: KCKLYCISSKISPTLSRKGHGAI*AGNTDE
Trigger: CTCATCTGTGTTGCCTGCCCAGATAGCCCCATGGCC...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CAA 90 bp TATAAGCTTCATTTACTAGGCCAGGTCTTTCTGTGTGAATGTGCTTaGACTTTGGTCTGTTTATATGCATGGGGTAAACGTGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: YKLHLLGQVFLCECA*TLVCLYAWGKRGTA
Trigger: GGCTGTCCCACGTTTACCCCATGCATATAAACAGACCAAAGTCAAAGCACATTCACACAGAAAGACCTGGCCTAGTAAATGAAGCTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR GCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAAAAAGAAATGGCCCAGTaGAAGCCCAGTGTGAGCCAA +
Preference number: 2 (lower is better)
Translates to: YCISSKISPTLSRKHSQKKEMAQ*KPSVSQ
Trigger: TTGGCTCACACTGGGCTTGCACTGGGCCATTTCTTT...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGACGGCAAGAACTGTCTaGATCCCACAAACATCCCCA +
Preference number: 2 (lower is better)
Translates to: KCKLYCISSKISPTLSRKTARTV*IPQTSP
Trigger: TGGGGATGTTTGTGGGATCCAGACAGTTCTTGCCGT...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGACTAGAGCACAGGGATaGACCATAGCCATGCTAACC +
Preference number: 2 (lower is better)
Translates to: KCKLYCISSKISPTLSRKTRAQG*TIAMLT
Trigger: GGTTAGCATGGCTATGGTCCATCCCTGTGCTCTAGT...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAAAAAGTTCAGCGTCAGTaGTTCCTGTTGCTGGTCATG +
Preference number: 2 (lower is better)
Translates to: YCISSKISPTLSRKHSQKKVQRQ*FLLLVM
Trigger: CATGACCAGCAACAGGAACCACTGACGCTGAACTTT...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR GCA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACCAGTGTTCTGTTTCCTaGTCTGCTTTAGAAAAGAGA +
Preference number: 2 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNQCSVS*SALEKR
Trigger: TCTCTTTTCTAAAGCAGAGCAGGAAACAGAACACTG...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR TCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAATGTGTGAATGTGCTTTaGCTTTGGTCTGTTTATATG +
Preference number: 2 (lower is better)
Translates to: YCISSKISPTLSRKHSQKCVNVL*LWSVYM
Trigger: CATATAAACAGACCAAAGTCAAAGCACATTCACACA...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR GCA 72 bp CATGGGGTAAACGTGGGACAGCCTCTGCAGCTTCACTaGCTGCCGGACGTGGGTCCAGGGCTGCCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: HGVNVGQPLQLH*LPDVGPGLPAL
Trigger: CAGAGCTGGCAGCCCTGGACCCACGTCCGGCAGGCAGTGAAGCTGCAGAGGCTGTCCCACGTTTACCCCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CAA 90 bp GGATGGGGGACCCCTTCTGTACAGAGCAGCCTCTACTTAGTGGCCGCTGACAGGGGGGAGTGCCTGGATTaGCCCCAATCAACCTCCCAC +
Preference number: 3 (lower is better)
Translates to: GWGTPSVQSSLYLVAADRGECLD*PQSTSH
Trigger: GTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCC...CCTGTCAGCGGCCACTAAGTAGAGGCTGCTCTGTACAGAAGGGGTCCCCCATCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 72 bp CTGGCAGACGGCCAGACAGCAGAGGGAACTCTGTATTaGCTGGGACAAGCCCTGGAGCCCTGTCTGGCTGTT +
Preference number: 3 (lower is better)
Translates to: LADGQTAEGTLY*LGQALEPCLAV
Trigger: AACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTCCCTCTGCTGTCTGGCCGTCTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 72 bp TTGACTGGGACAAGCCCTGGAGCCCTGTCTGGCTGTTaGCATGGGGAGTGCCTGGATTTGCCCCAATCAACC +
Preference number: 3 (lower is better)
Translates to: LTGTSPGALSGC*HGECLDLPQST
Trigger: GGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 72 bp CAGCTCTGGGTCCTTGGTCTGTTGGGGGTCGCAAACTaGAATGGCCATGGGGCTATCTGGGCAGGCAACACA +
Preference number: 3 (lower is better)
Translates to: QLWVLGLLGVAN*NGHGAIWAGNT
Trigger: TGTGTTGCCTGCCCAGATAGCCCCATGGCCATTTCAGTTTGCGACCCCCAACAGACCAAGGACCCAGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 72 bp GCACCCCCAAGCCACAAAGATCCCAGCTGCTATGGTTaGGGGGTAACCTGCCAGCACTGGAGCCAAGTGTTG +
Preference number: 3 (lower is better)
Translates to: APPSHKDPSCYG*GVTCQHWSQVL
Trigger: CAACACTTGGCTCCAGTGCTGGCAGGTTACCCCTCAACCATAGCAGCTGGGATCTTTGTGGCTTGGGGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CCA 72 bp CTCTGTATTGACTGGGACAAGCCCTGGAGCCCTGTCTaGCTGTTGACATGGGGAGTGCCTGGATTTGCCCCA +
Preference number: 3 (lower is better)
Translates to: LCIDWDKPWSPV*LLTWGVPGFAP
Trigger: TGGGGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CCA 72 bp CAGCAGAGGGAACTCTGTATTGACTGGGACAAGCCCTaGAGCCCTGTCTGGCTGTTGACATGGGGAGTGCCT +
Preference number: 3 (lower is better)
Translates to: QQRELCIDWDKP*SPVWLLTWGVP
Trigger: AGGCACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTCCCTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 72 bp CTGTCTGGATCCCACAAACATCCCCAGCCAAACTTCTaGGGCCTTAAGGGGAGGAGGCCTTGCACACCTGAC +
Preference number: 3 (lower is better)
Translates to: LSGSHKHPQPNF*GLKGRRPCTPD
Trigger: GTCAGGTGTGCAAGGCCTCCTCCCCTTAAGGCCTCAGAAGTTTGGCTGGGGATGTTTGTGGGATCCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 72 bp TCGATGATGGCAGGTTGTGTGCTGGCAGCCAGAGTCTaGGGCCACTGTCCAAAGTTCAGCGTCAGTGGTTCC +
Preference number: 3 (lower is better)
Translates to: SMMAGCVLAARV*GHCPKFSVSGS
Trigger: GGAACCACTGACGCTGAACTTTGGACAGTGGCCTCAGACTCTGGCTGCCAGCACACAACCTGCCATCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR GCA 72 bp CCCTGTCTGGCTGTTGACATGGGGAGTGCCTGGATTTaGCCCAATCAACCTCCCACCTTCACCATTGCCCAA +
Preference number: 3 (lower is better)
Translates to: PCLAVDMGSAWI*PNQPPTFTIAQ
Trigger: TTGGGCAATGGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGCCAGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CCA 72 bp ACAAGCACCCCCAAGCCACAAAGATCCCAGCTGCTATaGTTGAGGGGTAACCTGCCAGCACTGGAGCCAAGT +
Preference number: 3 (lower is better)
Translates to: TSTPKPQRSQLL*LRGNLPALEPS
Trigger: ACTTGGCTCCAGTGCTGGCAGGTTACCCCTCAACCATAGCAGCTGGGATCTTTGTGGCTTGGGGGTGCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CAA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACAGAGGGAACTCTGTATaGACTGGGACAAGCCCTGGA +
Preference number: 3 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNRGNSV*TGTSPG
Trigger: TCCAGGGCTTGTCCCAGTCAATACAGAGTTCCCTCT...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 72 bp AAGGCAGTGGTGAACACCCGCCTGACTGCCTTACCCTaGTCTAAACGACACCATCTCCTCCCCCAAGGAAGA +
Preference number: 3 (lower is better)
Translates to: KAVVNTRLTALP*SKRHHLLPQGR
Trigger: TCTTCCTTGGGGGAGGAGATGGTGTCGTTTAGATCAGGGTAAGGCAGTCAGGCGGGTGTTCACCACTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 72 bp GGTTTCACTGTGTTAGCCAGGATGTTCTCGATTTCCTaGCCTTGTGATCCGCCCGCGTCGGCCTCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: GFTVLARMFSIS*PCDPPASASQS
Trigger: ACTTTGGGAGGCCGACGCGGGCGGATCACAAGGTCAGGAAATCGAGAACATCCTGGCTAACACAGTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CAA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTGAGCTTGGGCTGGGGTaGCAGGGGCATCAGCCAATC +
Preference number: 3 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESELGLG*QGHQPI
Trigger: GATTGGCTGATGCCCCTGCAACCCCAGCCCAAGCTC...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 72 bp ACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGTGTaGGCCAAGAGTTGGCCATGTAATCAGTTCTGGCCC +
Preference number: 3 (lower is better)
Translates to: TRAKKWPSASPV*AKSWPCNQFWP
Trigger: GGGCCAGAACTGATTACATGGCCAACTCTTGGCTCACACTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CCA 72 bp CAGAGTCTGAGGCCACTGTCCAAAGTTCAGCGTCAGTaGTTCCTGTTGCTGGTCATGGAGAGAGACAACTGG +
Preference number: 3 (lower is better)
Translates to: QSLRPLSKVQRQ*FLLLVMERDNW
Trigger: CCAGTTGTCTCTCTCCATGACCAGCAACAGGAACCACTGACGCTGAACTTTGGACAGTGGCCTCAGACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 72 bp GTGAAGCTCTGCAGACACGGTTCATATCCTGGTGGCTaGGGGCACATAACCAAGAACTTACACAAGCACCCC +
Preference number: 3 (lower is better)
Translates to: VKLCRHGSYPGG*GHITKNLHKHP
Trigger: GGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCACCAGGATATGAACCGTGTCTGCAGAGCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR GCA 72 bp GGCCACTGTCCAAAGTTCAGCGTCAGTGGTTCCTGTTaGTGGTCATGGAGAGAGACAACTGGAAAGTCAGGT +
Preference number: 3 (lower is better)
Translates to: GHCPKFSVSGSC*WSWRETTGKSG
Trigger: ACCTGACTTTCCAGTTGTCTCTCTCCATGACCAGCAACAGGAACCACTGACGCTGAACTTTGGACAGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CAA 90 bp CTTTGGTCTGTTTATATGCATGGGGTAAACGTGGGACAGCCTCTGCAGCTTCACTATGTCACTCGGTCTTaGAGGCAGAGCTTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: LWSVYMHGVNVGQPLQLHYVTRS*RQSLGW
Trigger: CCAGCCCAAGCTCTGCCTCAAAGACCGAGTGACATA...GTGAAGCTGCAGAGGCTGTCCCACGTTTACCCCATGCATATAAACAGACCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CAA 90 bp CACAGTGAAAGCCAATGTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGACGCAGGGCTCCCACTTaGCAGTCTCTGATCTGTAGG +
Preference number: 3 (lower is better)
Translates to: HSESQCRQKVYNRIPRQRRRAPT*QSLICR
Trigger: CCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG...TCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTACATTGGCTTTCACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CAA 90 bp CACAGTGAAAGCCAATGTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAACCCCGCCCCACTCCTaGACACTTCCAGGTGATTTT +
Preference number: 3 (lower is better)
Translates to: HSESQCRQKVYNRIPRQRTPPHS*TLPGDF
Trigger: AAAATCACCTGGAAGTGTCAAGGAGTGGGGCGGGGT...TCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTACATTGGCTTTCACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR TCA 72 bp AGTTGGCCATGTAATCAGTTCTGGCCCAACCAGGTTTaGAAGGTAGAGGAGCAGTACTGGGTTTTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SWPCNQFWPNQV*KVEEQYWVLER
Trigger: CCTCTCCAAAACCCAGTACTGCTCCTCTACCTTTCAAACCTGGTTGGGCCAGAACTGATTACATGGCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR GCA 72 bp AGTGTTGGAGCTACTGATCCAAAGTTAGCTCACTTCTaGAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCA +
Preference number: 3 (lower is better)
Translates to: SVGATDPKLAHF*RGSEPEQRNGP
Trigger: TGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTGAGCTAACTTTGGATCAGTAGCTCCAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CAA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGAGCCCTGTCTGGCTGTaGACATGGGGAGTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: KCKLYCISSKISPTLSRKSPVWL*TWGVPG
Trigger: TCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCT...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CAA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACCTCAAGGAGCAAAACTaGGGCGTAAAAGGAACGGGC +
Preference number: 3 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNLKEQN*GVKGTG
Trigger: GCCCGTTCCTTTTACGCCCAAGTTTTGCTCCTTGAG...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CCA 72 bp CAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTaGCCCTTCAGAGTCTCAGTTAAGAGTCAAGGAAAG +
Preference number: 3 (lower is better)
Translates to: QKTRGSFNWKQG*PFRVSVKSQGK
Trigger: CTTTCCTTGACTCTTAACTGAGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CAA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCATTGGAACAAAGCCCTTaGCAGGCTATAAGCTTCATT +
Preference number: 3 (lower is better)
Translates to: VGRRFITESPGREVNFRALEQSP*QAISFI
Trigger: AATGAAGCTTATAGCCTGCAAAGGGCTTTGTTCCAA...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR-3UTR CAA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAACTGTGTGAATGTGCTTaGACTTTGGTCTGTTTATAT +
Preference number: 3 (lower is better)
Translates to: YCISSKISPTLSRKHSQKLCECA*TLVCLY
Trigger: ATATAAACAGACCAAAGTCAAAGCACATTCACACAG...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGAACTGCCTGCCGGACGTaGGTCCAGGGCTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRTACRT*VQGCQL
Trigger: GAGCTGGCAGCCCTGGACCCACGTCCGGCAGGCAGT...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGATGCAGCTTCACTGCCTaGCGGACGTGGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRCSFTA*RTWVQG
Trigger: GCCCTGGACCCACGTCCGGCAGGCAGTGAAGCTGCA...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GAAGAGCAGTGTCCACTGTGTGCCCCAGGGCAGTGGAGTGTCTCTGTGGCTGCAGCCCTGTCTGGCTGTTaGCATGGGGAGTGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: EEQCPLCAPGQWSVSVAAALSGC*HGECLD
Trigger: ATCCAGGCACTCCCCATGTCAACAGCCAGACAGGGC...TGCAGCCACAGAGACACTCCACTGCCCTGGGGCACACAGTGGACACTGCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACGTCTGGAGGTCTGGGTaGCCTGGCAGCACGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNVWRSG*PGSTAA
Trigger: AGCAGCCGTGCTGCCAGGTCACCCAGACCTCCAGAC...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GGATGGGGGACCCCTTCTGTACAGAGCAGCCTCTACTTAGTGGCCGCTGACAGGCCCCAGCCAAACTTCTaGGGCCTTAAGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GWGTPSVQSSLYLVAADRPQPNF*GLKGRR
Trigger: CCTCCTCCCCTTAAGGCCTCAGAAGTTTGGCTGGGG...CCTGTCAGCGGCCACTAAGTAGAGGCTGCTCTGTACAGAAGGGGTCCCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACGATTTCCTGACCTTGTaGTCCGCCCGCGTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHDFLTL*SARVGL
Trigger: GAGGCCGACGCGGGCGGATCACAAGGTCAGGAAATC...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGATGTCATTTCATCTCCTaGGTCCGCCCCACACCCCGC +
Preference number: 4 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRCHFIS*VRPTPR
Trigger: GCGGGGTGTGGGGCGGACCCAGGAGATGAAATGACA...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGAGACTGGGACAAGCCCTaGAGCCCTGTCTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRDWDKP*SPVWLL
Trigger: CAACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTC...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CAA 72 bp CCTGGCAGACGGCCAGACAGCAGAGGGAACTCTGTATaGACTGGGACAAGCCCTGGAGCCCTGTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PGRRPDSRGNSV*TGTSPGALSGC
Trigger: ACAGCCAGACAGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTCCCTCTGCTGTCTGGCCGTCTGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp GAAGAGCAGTGTCCACTGTGTGCCCCAGGGCAGTGGAGTGTCTCTGTGGCTGCACGCACTTGGCTCGAATaGTCTCCTTGGCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: EEQCPLCAPGQWSVSVAARTWLE*SPWPCR
Trigger: GCGACAAGGCCAAGGAGAGCATTCGAGCCAAGTGCG...TGCAGCCACAGAGACACTCCACTGCCCTGGGGCACACAGTGGACACTGCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGATTTCAGGAGGTCGTCTaGATTCACCGTGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRFQEVV*IHRGPG
Trigger: ACCCGGCCCACGGTGAATGCAGACGACCTCCTGAAA...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CAA 72 bp AGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACTTaGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAG +
Preference number: 4 (lower is better)
Translates to: SCRTGLVRRAPT*QSLICRPNNGK
Trigger: CTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACCCCAGCTGCTATGGTTaGGGGGTAACCTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNPSCYG*GVTCQH
Trigger: GTGCTGGCAGGTTACCCCTCAACCATAGCAGCTGGG...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTGGGGAGCCGAGGTACTaGGTCCGGCGCGGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESGEPRY*VRRGKP
Trigger: GGGCTTCCCGCGCCGGACCCAGTACCTCGGCTCCCC...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGTACTCCACCGCATGCTaGTACAGCCGCAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQYSTAC*YSRSAS
Trigger: GGAGGCGCTGCGGCTGTACCAGCATGCGGTGGAGTA...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACTGTGCCCCAGGGCAGTaGAGTGTCTCTGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNCAPGQ*SVSVAA
Trigger: TGCAGCCACAGAGACACTCCACTGCCCTGGGGCACA...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCAGAGGTCTGGGTGACCTaGCAGCACGGCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTAEVWVT*QHGCFS
Trigger: GGAGAAGCAGCCGTGCTGCCAGGTCACCCAGACCTC...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GCTGTTGACATGGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCTTCACCTGGCAGGTTGTGTGCTaGCAGCCAGAGTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: AVDMGSAWICPNQPPTFTWQVVC*QPESEA
Trigger: GGCCTCAGACTCTGGCTGCCAGCACACAACCTGCCA...GGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACCTGGCAGCCAGAGTCTaGGGCCACTGTCCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNLAARV*GHCPKF
Trigger: GAACTTTGGACAGTGGCCTCAGACTCTGGCTGCCAG...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACCACTGTCACTGTCACTaGCCTTGCCCTCACTCTGGT +
Preference number: 4 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHHCHCH*PCPHSG
Trigger: ACCAGAGTGAGGGCAAGGGCAGTGACAGTGACAGTG...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGGGAGTGCTCCCGAGATaGAACCGGAACATCTGGGCG +
Preference number: 4 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQGVLPR*NRNIWA
Trigger: CGCCCAGATGTTCCGGTTGCATCTCGGGAGCACTCC...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACGGGAGTGCCTGGATTTaGCCCAATCAACCTCCCACC +
Preference number: 4 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNGSAWI*PNQPPT
Trigger: GGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCC...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACCCAAACAAACACAGCTaGAGGACGGGTCTGGTACGC +
Preference number: 4 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHPNKHS*RTGLVR
Trigger: GCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGG...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATTCACCGTGGGCCGGGTaGTGGCCAGAGACCGCAGCA +
Preference number: 4 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDSPWAG*WPETAA
Trigger: TGCTGCGGTCTCTGGCCACCACCCGGCCCACGGTGA...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGCCCTGGAGCCCTGTCTaGCTGTTGACATGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQPWSPV*LLTWGV
Trigger: CACTCCCCATGTCAACAGCCAGACAGGGCTCCAGGG...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACGGTCGCAAACTGAAATaGCCATGGGGCTATCTGGGC +
Preference number: 4 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHGRKLK*PWGYLG
Trigger: GCCCAGATAGCCCCATGGCCATTTCAGTTTGCGACC...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GAAGAGCAGTGTCCACTGTGTGCCCCAGGGCAGTGGAGTGTCTCTGTGGCTGCACTGACTGCCTTACCCTaGTCTAAACGACACCATCTC +
Preference number: 4 (lower is better)
Translates to: EEQCPLCAPGQWSVSVAALTALP*SKRHHL
Trigger: GAGATGGTGTCGTTTAGATCAGGGTAAGGCAGTCAG...TGCAGCCACAGAGACACTCCACTGCCCTGGGGCACACAGTGGACACTGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GCTGTTGACATGGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCTTCACCAGTGCAAGCCCAGTGTaGGCCAAGAGTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: AVDMGSAWICPNQPPTFTSASPV*AKSWPC
Trigger: ACATGGCCAACTCTTGGCTCACACTGGGCTTGCACT...GGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GGATGGGGGACCCCTTCTGTACAGAGCAGCCTCTACTTAGTGGCCGCTGACAGGTCATATCCTGGTGGCTaGGGGCACATAACCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GWGTPSVQSSLYLVAADRSYPGG*GHITKN
Trigger: GTTCTTGGTTATGTGCCCTCAGCCACCAGGATATGA...CCTGTCAGCGGCCACTAAGTAGAGGCTGCTCTGTACAGAAGGGGTCCCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCAGCCCGGTCTAGGTACTaGACGCACTTGGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTAARSRY*THLARM
Trigger: CATTCGAGCCAAGTGCGTGCAGTACCTAGACCGGGC...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp GCTGTTGACATGGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCTTCACCGTTGTTGGCCTCTGTTaGCACGGCTTTGGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: AVDMGSAWICPNQPPTFTVVGLC*HGFGQV
Trigger: TACCTGGCCAAAGCCGTGGCAACAGAGGCCAACAAC...GGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCACTCGAATGCTCTCCTTaGCCTTGTCGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTALECSP*PCRCGP
Trigger: AGGCCCACAGCGACAAGGCCAAGGAGAGCATTCGAG...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACCCCTTGCCCTCACTCTaGTTCTCTTTGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHPLPSL*FSLTGF
Trigger: GAAGCCAGTCAAAGAGAACCAGAGTGAGGGCAAGGG...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTCCGTGGGCCGGGTGGTaGCCAGAGACCGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESPWAGW*PETAAC
Trigger: ACATGCTGCGGTCTCTGGCCACCACCCGGCCCACGG...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATCGTCTGCATTCACCGTaGGCCGGGTGGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDRLHSP*AGWWPE
Trigger: CTCTGGCCACCACCCGGCCCACGGTGAATGCAGACG...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GCTGTTGACATGGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCTTCACCGTCTGGCTGTTGACATaGGGAGTGCCTGGATTTGCC +
Preference number: 4 (lower is better)
Translates to: AVDMGSAWICPNQPPTFTVWLLT*GVPGFA
Trigger: GGCAAATCCAGGCACTCCCCATGTCAACAGCCAGAC...GGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACAGTGGAGTGTCTCTGTaGCTGCAAGGCCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNSGVSL*LQGPSF
Trigger: GAAGGAAGGGCCTTGCAGCCACAGAGACACTCCACT...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGGGCCATGGGGCTATCTaGGCAGGCAACACAGATGAG +
Preference number: 4 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQGHGAI*AGNTDE
Trigger: CTCATCTGTGTTGCCTGCCCAGATAGCCCCATGGCC...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CAA 72 bp AGCACCCCCAAGCCACAAAGATCCCAGCTGCTATGGTaGAGGGGTAACCTGCCAGCACTGGAGCCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: STPKPQRSQLLW*RGNLPALEPSV
Trigger: AACACTTGGCTCCAGTGCTGGCAGGTTACCCCTCAACCATAGCAGCTGGGATCTTTGTGGCTTGGGGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATTCCTGGGTCCCCTGGTaGGCATGGAGTCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDSWVPW*AWSQEV
Trigger: GACCTCCTGACTCCATGCTCACCAGGGGACCCAGGA...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGATGATGGAGGGCTTGTaGTGCCTGGCCAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQMMEGL*CLASSN
Trigger: GTTTGAGCTGGCCAGGCAGCACAAGCCCTCCATCAT...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGAGGGCATCAGCCAATCTaGTCTCAAGGAGCAAAACTT +
Preference number: 4 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRGHQPI*SQGAKL
Trigger: AAGTTTTGCTCCTTGAGAGCAGATTGGCTGATGCCC...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGAAAGTTAGCTCACTTCTaGAGAGGCTCTGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRKLAHF*RGSEPE
Trigger: CTCTGGTTCAGAGCCTCTGCAGAAGTGAGCTAACTT...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACAGAAGGTGGAGTTGTTaGCCTCTGTTGCCACGGCTT +
Preference number: 4 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNRRWSC*PLLPRL
Trigger: AAGCCGTGGCAACAGAGGCCAACAACTCCACCTTCT...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCATCTCCCCCAGCCACTTaGACATCAGATCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTASPPAT*TSDLRR
Trigger: CCTCCTCAGATCTGATGTCCAAGTGGCTGGGGGAGA...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACGAACTCTGTATTGACTaGGACAAGCCCTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNELCID*DKPWSP
Trigger: AGGGCTCCAGGGCTTGTCCCAGTCAATACAGAGTTC...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GGATGGGGGACCCCTTCTGTACAGAGCAGCCTCTACTTAGTGGCCGCTGACAGGAGAGGGTCTTTTAATTaGAAGCAAGGGTGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GWGTPSVQSSLYLVAADRRGSFN*KQGWPF
Trigger: GAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCT...CCTGTCAGCGGCCACTAAGTAGAGGCTGCTCTGTACAGAAGGGGTCCCCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCAGCTGCAGGACGGGTCTaGTACGCAGGGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: PLHMSACLTSMMAGCVLAAAGRV*YAGLPL
Trigger: AAGTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGC...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACAAACTGAAATGGCCATaGGGCTATCTGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHKLKWP*GYLGRQ
Trigger: TTGCCTGCCCAGATAGCCCCATGGCCATTTCAGTTT...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GGATGGGGGACCCCTTCTGTACAGAGCAGCCTCTACTTAGTGGCCGCTGACAGGGTCTGTTTATATGCATaGGGTAAACGTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: GWGTPSVQSSLYLVAADRVCLYA*GKRGTA
Trigger: GGCTGTCCCACGTTTACCCCATGCATATAAACAGAC...CCTGTCAGCGGCCACTAAGTAGAGGCTGCTCTGTACAGAAGGGGTCCCCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACGTAACCTGCCAGCACTaGAGCCAAGTGTTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNVTCQH*SQVLEL
Trigger: TAGCTCCAACACTTGGCTCCAGTGCTGGCAGGTTAC...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACACACGGTTCATATCCTaGTGGCTGAGGGCACATAAC +
Preference number: 4 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHTRFIS*WLRAHN
Trigger: GTTATGTGCCCTCAGCCACCAGGATATGAACCGTGT...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GGATGGGGGACCCCTTCTGTACAGAGCAGCCTCTACTTAGTGGCCGCTGACAGGTCCTGTTGCTGGTCATaGAGAGAGACAACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GWGTPSVQSSLYLVAADRSCCWS*RETTGK
Trigger: CTTTCCAGTTGTCTCTCTCCATGACCAGCAACAGGA...CCTGTCAGCGGCCACTAAGTAGAGGCTGCTCTGTACAGAAGGGGTCCCCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGACCAGGTCTTTCTGTGTaGATGTGCTTTGACTTTGGT +
Preference number: 4 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRPGLSV*MCFDFG
Trigger: ACCAAAGTCAAAGCACATTCACACAGAAAGACCTGG...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCATGGCCCAACCAGGTTTaGAAGGTAGAGGAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTAWPNQV*KVEEQY
Trigger: GTACTGCTCCTCTACCTTTCAAACCTGGTTGGGCCA...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp CTTTGGTCTGTTTATATGCATGGGGTAAACGTGGGACAGCCTCTGCAGCTTCACAAGTACTCCACCGCATaGTGGTACAGCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LWSVYMHGVNVGQPLQLHKYSTA*WYSRSA
Trigger: GGCGCTGCGGCTGTACCAGCATGCGGTGGAGTACTT...GTGAAGCTGCAGAGGCTGTCCCACGTTTACCCCATGCATATAAACAGACCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATGCAGTGTCCACTGTGTaGCCCAGGGCAGTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDAVSTV*PRAVEC
Trigger: ACACTCCACTGCCCTGGGGCACACAGTGGACACTGC...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCACCTCCTCGTAGTTCTTaGCTTTGTCCTCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTAPPRSS*LCPPLW
Trigger: CCACAGAGGAGGACAAAGCCAAGAACTACGAGGAGG...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCATTCCTTCTGGCTCCCTaGCAGACGGCCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PLHMSACLTSMMAGCVLAFLLAP*QTARQQ
Trigger: CTGCTGTCTGGCCGTCTGCCAGGGAGCCAGAAGGAA...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GCTGTTGACATGGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCTTCACCACGGCAAGAACTGTCTaGATCCCACAAACATCCCCA +
Preference number: 4 (lower is better)
Translates to: AVDMGSAWICPNQPPTFTTARTV*IPQTSP
Trigger: TGGGGATGTTTGTGGGATCCAGACAGTTCTTGCCGT...GGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GCTGTTGACATGGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCTTCACCACTAGAGCACAGGGATaGACCATAGCCATGCTAACC +
Preference number: 4 (lower is better)
Translates to: AVDMGSAWICPNQPPTFTTRAQG*TIAMLT
Trigger: GGTTAGCATGGCTATGGTCCATCCCTGTGCTCTAGT...GGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTCCAAGAACTCCGTTTTaGTCCTCCGGGCGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESPRTPF*SSGRPH
Trigger: GTGAGGCCGCCCGGAGGATCAAAACGGAGTTCTTGG...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GGATGGGGGACCCCTTCTGTACAGAGCAGCCTCTACTTAGTGGCCGCTGACAGGTTGCCCAAAGTCCTCTaGGAATTTCTTCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: GWGTPSVQSSLYLVAADRLPKVL*EFLHFQ
Trigger: CTGAAAGTGAAGAAATTCTCAGAGGACTTTGGGCAA...CCTGTCAGCGGCCACTAAGTAGAGGCTGCTCTGTACAGAAGGGGTCCCCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACGTAAGCTCACTAAAGTaGAGCTCTGCAGACACGGTT +
Preference number: 4 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNVSSLK*SSADTV
Trigger: AACCGTGTCTGCAGAGCTTCACTTTAGTGAGCTTAC...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp CTTTGGTCTGTTTATATGCATGGGGTAAACGTGGGACAGCCTCTGCAGCTTCACGGTAGGATTTCCCTGTaGCAGGGGGTCCGAACAGCA +
Preference number: 4 (lower is better)
Translates to: LWSVYMHGVNVGQPLQLHGRISL*QGVRTA
Trigger: TGCTGTTCGGACCCCCTGGCACAGGGAAATCCTACC...GTGAAGCTGCAGAGGCTGTCCCACGTTTACCCCATGCATATAAACAGACCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACAACAGGCCTAAGAACTaGAGTGTTCTGTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHNRPKN*SVLFPA
Trigger: AGCAGGAAACAGAACACTGCAGTTCTTAGGCCTGTT...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GGATGGGGGACCCCTTCTGTACAGAGCAGCCTCTACTTAGTGGCCGCTGACAGGAGATCAATGGCTTTCTaGAGGGTTGACGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: GWGTPSVQSSLYLVAADRRSMAF*RVDVVI
Trigger: AATGACAACGTCAACCCTCCAGAAAGCCATTGATCT...CCTGTCAGCGGCCACTAAGTAGAGGCTGCTCTGTACAGAAGGGGTCCCCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATCCAGCTCTGGGTCCTTaGTCTGTTGGGGGTCGCAAA +
Preference number: 4 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDPALGP*SVGGRK
Trigger: TTTGCGACCCCCAACAGACCAAGGACCCAGAGCTGG...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGGTAGAGGAGCAGTACTaGGTTTTGGAGAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQVEEQY*VLEREG
Trigger: ACCTTCCCTCTCCAAAACCCAGTACTGCTCCTCTAC...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CAA 72 bp AGGCCACTGTCCAAAGTTCAGCGTCAGTGGTTCCTGTaGCTGGTCATGGAGAGAGACAACTGGAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: RPLSKVQRQWFL*LVMERDNWKVR
Trigger: CCTGACTTTCCAGTTGTCTCTCTCCATGACCAGCAACAGGAACCACTGACGCTGAACTTTGGACAGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCACAGCTCGTGGATGTTTaGATCCGTGAGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PLHMSACLTSMMAGCVLAQLVDV*IREVVG
Trigger: CCCCACAACCTCACGGATGCAAACATCCACGAGCTG...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCAAAGGGGAGGAGGCCTTaGACACCTGACTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: PLHMSACLTSMMAGCVLAKGRRP*TPDWRT
Trigger: TGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTT...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CACTTCTGCAGAGGCTCTGAACCAGAGCAAAGAAATGGCCCAGTGCAAGCCCAGCTGGTTCTCTTTGACTaGCTTCTTGCCGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: HFCRGSEPEQRNGPVQAQLVLFD*LLAVFL
Trigger: GAGAAACACGGCAAGAAGCCAGTCAAAGAGAACCAG...CTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCACGTTCCACCGTATGTTaGGCTTCTCCATCACGACGG +
Preference number: 4 (lower is better)
Translates to: PLHMSACLTSMMAGCVLARSTVC*ASPSRR
Trigger: CCGTCGTGATGGAGAAGCCCAACATACGGTGGAACG...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGAGCCTGTGAACAAGTGTaGGAATTTGATTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRACEQV*EFDWQN
Trigger: ATTTTGCCAATCAAATTCCCACACTTGTTCACAGGC...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CTTTGGTCTGTTTATATGCATGGGGTAAACGTGGGACAGCCTCTGCAGCTTCACAGGGCTTGTGCTGCCTaGCCAGCTCAAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LWSVYMHGVNVGQPLQLHRACAA*PAQTGS
Trigger: AGAACCTGTTTGAGCTGGCCAGGCAGCACAAGCCCT...GTGAAGCTGCAGAGGCTGTCCCACGTTTACCCCATGCATATAAACAGACCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCATGCAACCGGAACATCTaGGCGCGGGCAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGRRFITESPGREVNFRACNRNI*ARAASS
Trigger: GGAGGAAGCTGCCCGCGCCCAGATGTTCCGGTTGCA...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GCTGTTGACATGGGGAGTGCCTGGATTTGCCCCAATCAACCTCCCACCTTCACCAAGTGTTGGAGCTACTaGTCCAAAGTTAGCTCACTT +
Preference number: 4 (lower is better)
Translates to: AVDMGSAWICPNQPPTFTKCWSY*SKVSSL
Trigger: AAGTGAGCTAACTTTGGATCAGTAGCTCCAACACTT...GGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCCATGTCAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCAAAATCTCTCCCACTTTaGGCAGGAAGCACTCACAAA +
Preference number: 4 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTAKSLPL*AGSTHK
Trigger: TTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTT...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCAAAGTGTGTGGCCGACTaGACCTTCCTCACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VGRRFITESPGREVNFRAKCVAD*TFLTGC
Trigger: GCAGCCCGTGAGGAAGGTGCAGTCGGCCACACACTT...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACACGTGGGTCCAGGGCTaGCAGCTCTGGGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNTWVQG*QLWVLG
Trigger: ACCAAGGACCCAGAGCTGGCAGCCCTGGACCCACGT...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCATTGGCCTTGTCGCTGTaGGCCTCATACTTGATAGCG +
Preference number: 4 (lower is better)
Translates to: PLHMSACLTSMMAGCVLALALSL*ASYLIA
Trigger: CGCTATCAAGTATGAGGCCCACAGCGACAAGGCCAA...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CACAGTGAAAGCCAATGTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGATCCAAGTCATCTCCATaGCTCCTGGGTCCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: HSESQCRQKVYNRIPRQRSKSSP*LLGPLV
Trigger: CACCAGGGGACCCAGGAGCCATGGAGATGACTTGGA...TCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTACATTGGCTTTCACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATAGATCCCAGCTGCTATaGTTGAGGGGTAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDRSQLL*LRGNLP
Trigger: TGGCAGGTTACCCCTCAACCATAGCAGCTGGGATCT...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp CTTTGGTCTGTTTATATGCATGGGGTAAACGTGGGACAGCCTCTGCAGCTTCACGGCTTTCTGGAGGGTTaGCGTTGTCATTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: LWSVYMHGVNVGQPLQLHGFLEG*RCHFIS
Trigger: GGAGATGAAATGACAACGTCAACCCTCCAGAAAGCC...GTGAAGCTGCAGAGGCTGTCCCACGTTTACCCCATGCATATAAACAGACCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCAGGATGTTTGCATCCGTaGGGTTGTGGGGAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: VGRRFITESPGREVNFRAGCLHP*GCGECS
Trigger: GGAGCACTCCCCACAACCTCACGGATGCAAACATCC...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAAGGCAGGCAACACAGATaGGTGGGGATGGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: YCISSKISPTLSRKHSQKGRQHR*VGMGDP
Trigger: GGGGTCCCCCATCCCCACTCATCTGTGTTGCCTGCC...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp CGCAGGGCTCCCACTTTGCAGTCTCTGATCTGTAGGCCGAACAACGGCAAGAACTACATGTCAACGTTGTaGGCTCATCAGAGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: RRAPTLQSLICRPNNGKNYMSTL*AHQSFR
Trigger: TCTAAAACTCTGATGAGCTCACAACGTTGACATGTA...GTTCTTGCCGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCAATGGAGGGCTTGTGCTaGCTGGCCAGCTCAAACAGG +
Preference number: 4 (lower is better)
Translates to: VGRRFITESPGREVNFRAMEGLC*LASSNR
Trigger: CCTGTTTGAGCTGGCCAGGCAGCACAAGCCCTCCAT...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCATCGTCACCAGATCAATaGCTTTCTGGAGGGTTGACG +
Preference number: 4 (lower is better)
Translates to: PLHMSACLTSMMAGCVLASSPDQ*LSGGLT
Trigger: CGTCAACCCTCCAGAAAGCCATTGATCTGGTGACGA...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACGCATCCGTGAGGTTGTaGGGAGTGCTCCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNASVRL*GVLPRC
Trigger: GCATCTCGGGAGCACTCCCCACAACCTCACGGATGC...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCACCTTGCACACCTGACTaGAGAACAGGCCTAAGAACT +
Preference number: 4 (lower is better)
Translates to: PLHMSACLTSMMAGCVLAPCTPD*RTGLRT
Trigger: AGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGG...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTACCAGAGCAAAGAAATaGCCCAGTGCAAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESTRAKK*PSASPV
Trigger: CACTGGGCTTGCACTGGGCCATTTCTTTGCTCTGGT...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACGAGGCCTTGCACACCTaGCTGGAGAACAGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNEALHT*LENRPK
Trigger: CTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTC...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTCTTCTGCAGAGGCTCTaGACCAGAGCAAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESLLQRL*TRAKKW
Trigger: CCATTTCTTTGCTCTGGTTCAGAGCCTCTGCAGAAG...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp CACAGTGAAAGCCAATGTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGATTATTCCCCACCCCCTaGATCTGGACCAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: HSESQCRQKVYNRIPRQRLFPTP*IWTKNS
Trigger: GGAGTTCTTGGTCCAGATGCAGGGGGTGGGGAATAA...TCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTACATTGGCTTTCACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATCTTTGTCCTCCTCTGTaGCTTTCGTCACCAGATCAA +
Preference number: 4 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDLCPPL*LSSPDQ
Trigger: TTGATCTGGTGACGAAAGCCACAGAGGAGGACAAAG...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTCGAATCCAACACCCATaGGATGTTTGTGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESRIQHP*DVCGSK
Trigger: CTTGGAGCCACAAACATCCCATGGGTGTTGGATTCG...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATAGCAGTACTGGGTTTTaGAGAGGGAAGGTTGGAACA +
Preference number: 4 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDSSTGF*RGKVGT
Trigger: TGTTCCAACCTTCCCTCTCCAAAACCCAGTACTGCT...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTCGGTTCATATCCTGGTaGCTGAGGGCACATAACCAA +
Preference number: 4 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESRFISW*LRAHNQ
Trigger: TTGGTTATGTGCCCTCAGCCACCAGGATATGAACCG...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCATTTCAAACCTCCTCCTaGTGGCCGAATCCAACACCC +
Preference number: 4 (lower is better)
Translates to: VGRRFITESPGREVNFRAFQTSS*WPNPTP
Trigger: GGGTGTTGGATTCGGCCATCAGGAGGAGGTTTGAAA...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCATGTGTGAATGTGCTTTaGCTTTGGTCTGTTTATATG +
Preference number: 4 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTACVNVL*LWSVYM
Trigger: CATATAAACAGACCAAAGTCAAAGCACATTCACACA...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCCTCTGCAGCTTCACTaGCTGCCGGACGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: KCKLYCISSKISPTLSRKPLQLH*LPDVGP
Trigger: TGGACCCACGTCCGGCAGGCAGTGAAGCTGCAGAGG...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACCATCAATCATCATGCTaGGGTTGGTGCGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNHQSSC*GWCERG
Trigger: GCCCCTCTCGCACCAACCCCAGCATGATGATTGATG...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCAAGGCCCTTCCTTCTaGCTCCCTGGCAGACGGCCA +
Preference number: 4 (lower is better)
Translates to: KCKLYCISSKISPTLSRKQGPSF*LPGRRP
Trigger: TGGCCGTCTGCCAGGGAGCCAGAAGGAAGGGCCTTG...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACCCACTTTGCAGTCTCTaGTCTGTAGGCCGAACAACG +
Preference number: 4 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNPLCSL*SVGRTT
Trigger: CGTTGTTCGGCCTACAGATCAGAGACTGCAAAGTGG...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTCCCATCAGCTGTTCTTaGAGTTTCTTTTTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESPISCS*SFFFSG
Trigger: TCCGGAGAAAAAGAAACTGCAAGAACAGCTGATGGG...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGACCTTCCTCACGGGCTaGATGAGAGAGTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: KCKLYCISSKISPTLSRKTFLTG*MRESRT
Trigger: CGTGCGGGACTCTCTCATGCAGCCCGTGAGGAAGGT...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCAAAAGAAATGGCCCAGTaGAAGCCCAGTGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: VGRRFITESPGREVNFRAKEMAQ*KPSVSQ
Trigger: TTGGCTCACACTGGGCTTGCACTGGGCCATTTCTTT...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATACTAAAGTGAAGCTCTaGAGACACGGTTCATATCCT +
Preference number: 4 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDTKVKL*RHGSYP
Trigger: AGGATATGAACCGTGTCTGCAGAGCTTCACTTTAGT...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CACAGTGAAAGCCAATGTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGATCATACTTGATAGCGTaGAGGAAGTACTCCACCGCA +
Preference number: 4 (lower is better)
Translates to: HSESQCRQKVYNRIPRQRSYLIA*RKYSTA
Trigger: TGCGGTGGAGTACTTCCTCCACGCTATCAAGTATGA...TCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTACATTGGCTTTCACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCCCAGGGGCAGTGGCTaGGTTCAGTGTTCTCACGCT +
Preference number: 4 (lower is better)
Translates to: KCKLYCISSKISPTLSRKPRGSG*VQCSHA
Trigger: AGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGG...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp CACAGTGAAAGCCAATGTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAATTGGAAGCAAGGGTaGCCCTTCAGAGTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: HSESQCRQKVYNRIPRQRNWKQG*PFRVSV
Trigger: AACTGAGACTCTGAAGGGCCACCCTTGCTTCCAATT...TCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTACATTGGCTTTCACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAAGGCCACAGACCTTTTTaGAGTGTGTGGCCGACTGCA +
Preference number: 4 (lower is better)
Translates to: YCISSKISPTLSRKHSQKGHRPF*SVWPTA
Trigger: TGCAGTCGGCCACACACTTCAAAAAGGTCTGTGGCC...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAAGGTACTGCACGCACTTaGCTCGAATGCTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: YCISSKISPTLSRKHSQKGTART*LECSPW
Trigger: CCAAGGAGAGCATTCGAGCCAAGTGCGTGCAGTACC...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGTTCCGGGCCAGCTCGTaGATGTTTGCATCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: KCKLYCISSKISPTLSRKFRASS*MFASVR
Trigger: CCTCACGGATGCAAACATCCACGAGCTGGCCCGGAA...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGTCATCATGCTGGGGTTaGTGCGAGAGGGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: KCKLYCISSKISPTLSRKSSCWG*CERGHR
Trigger: TCTGTGGCCCCTCTCGCACCAACCCCAGCATGATGA...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCAAGTGGTTCCTGTTGCTaGTCATGGAGAGAGACAACT +
Preference number: 4 (lower is better)
Translates to: VGRRFITESPGREVNFRASGSCC*SWRETT
Trigger: AGTTGTCTCTCTCCATGACCAGCAACAGGAACCACT...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR TCA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCAAGAGTCAAGGAAAGATaGGATCACTTGGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: VGRRFITESPGREVNFRARVKER*DHLGSS
Trigger: TGAGCTACCCAAGTGATCTCATCTTTCCTTGACTCT...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAAGGTCATCAATCATCATaGTGGGGTTGGTGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: YCISSKISPTLSRKHSQKGHQSS*WGWCER
Trigger: CCTCTCGCACCAACCCCAGCATGATGATTGATGACC...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCTGTTGCCACGGCTTTaGCCAGGTAGGATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KCKLYCISSKISPTLSRKLLPRL*PGRISL
Trigger: CAGGGAAATCCTACCTGGCCAAAGCCGTGGCAACAG...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp GTAGGCAGAAGGTTTATAACAGAATCCCCAGGCAGAGAAGTGAATTTCAGAGCAATGGAGAGAGACAACTaGAAAGTCAGGTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VGRRFITESPGREVNFRAMERDN*KVRCLH
Trigger: GTGAAGACACCTGACTTTCCAGTTGTCTCTCTCCAT...TGCTCTGAAATTCACTTCTCTGCCTGGGGATTCTGTTATAAACCTTCTGCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGGTCAGTGGTTCCTGTTaGTGGTCATGGAGAGAGACA +
Preference number: 4 (lower is better)
Translates to: KCKLYCISSKISPTLSRKVSGSC*WSWRET
Trigger: TGTCTCTCTCCATGACCAGCAACAGGAACCACTGAC...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCTAGGAGGGTGGGAATaGCTTATGTCACTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: KCKLYCISSKISPTLSRKLGGWE*LMSLGL
Trigger: AAGACCGAGTGACATAAGCCATTCCCACCCTCCTAG...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
3UTR CAA 72 bp CATTTACTAGGCCAGGTCTTTCTGTGTGAATGTGCTTaGACTTTGGTCTGTTTATATGCATGGGGTAAACGT +
Preference number: 4 (lower is better)
Translates to: HLLGQVFLCECA*TLVCLYAWGKR
Trigger: ACGTTTACCCCATGCATATAAACAGACCAAAGTCAAAGCACATTCACACAGAAAGACCTGGCCTAGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGAAAGTTCAGCGTCAGTaGTTCCTGTTGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: KCKLYCISSKISPTLSRKKVQRQ*FLLLVM
Trigger: CATGACCAGCAACAGGAACCACTGACGCTGAACTTT...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAACAGTGTTCTGTTTCCTaGTCTGCTTTAGAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: YCISSKISPTLSRKHSQKQCSVS*SALEKR
Trigger: TCTCTTTTCTAAAGCAGAGCAGGAAACAGAACACTG...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR GCA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGTGCCGTGTTTCTCTTTaGTTCGTAAATAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: KCKLYCISSKISPTLSRKCRVSL*FVNNPS
Trigger: TGAAGGATTATTTACGAAGCAAAGAGAAACACGGCA...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS GCA 90 bp CAGACGGGAAGACTCCAGGGAAAAGGGGCCAGGCTGCACCCGGGCTaGCAGCAGCAGGCGGACCGTGACCATGGTGGGAGGAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: QTGRLQGKGARLHPG*QQQADRDHGGRKPP
Trigger: TGGAGGCTTCCTCCCACCATGGTCACGGTCCGCCTGCTGCTGGCAGCCCGGGTGCAGCCTGGCCCCTTTTCCCTGGAGTCTTCCCGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS GCA 90 bp TGCTTGGCAGGCAGACGGGAAGACTCCAGGGAAAAGGGGCCAGGCTaGACCCGGGCTGCCAGCAGCAGGCGGACCGTGACCATGGTGGGA +
Preference number: 5 (lower is better)
Translates to: CLAGRREDSREKGPG*TRAASSRRTVTMVG
Trigger: TCCCACCATGGTCACGGTCCGCCTGCTGCTGGCAGCCCGGGTGCAGCCTGGCCCCTTTTCCCTGGAGTCTTCCCGTCTGCCTGCCAAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS CCA 90 bp AGAAGAGCTGCAGGGAGGGGACAGTGGGTGCAGCCCCCATGGCACTaGCCCTCGGCTCTCCAGGAGGCCTCAGAGACTGTGTCACCTGAG +
Preference number: 5 (lower is better)
Translates to: RRAAGRGQWVQPPWH*PSALQEASETVSPE
Trigger: CTCAGGTGACACAGTCTCTGAGGCCTCCTGGAGAGCCGAGGGCCAGTGCCATGGGGGCTGCACCCACTGTCCCCTCCCTGCAGCTCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS CCA 90 bp AGCAGCAGGCGGACCGTGACCATGGTGGGAGGAAGCCTCCAGCCCTaGCTTCTCCTGGGGAAGACTCACCTCCTCCTGATGGCCGAATCC +
Preference number: 5 (lower is better)
Translates to: SSRRTVTMVGGSLQP*LLLGKTHLLLMAES
Trigger: GGATTCGGCCATCAGGAGGAGGTGAGTCTTCCCCAGGAGAAGCCAGGGCTGGAGGCTTCCTCCCACCATGGTCACGGTCCGCCTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS GCA 90 bp TCGTGGATGTTTGCATCCGTGAGGTTGTGGGGAGTGCTCCCGAGATaGAACCGGAACATCTGGGCGCGGGCAGCTTCCTCCGGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: SWMFASVRLWGVLPR*NRNIWARAASSGKG
Trigger: CCCCTTGCCGGAGGAAGCTGCCCGCGCCCAGATGTTCCGGTTGCATCTCGGGAGCACTCCCCACAACCTCACGGATGCAAACATCCACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS GCA 90 bp CGCGCCCGAGTAGCCTTCCGTCTTCCGGGCCAGCTCGTGGATGTTTaGATCCGTGAGGTTGTGGGGAGTGCTCCCGAGATGCAACCGGAA +
Preference number: 5 (lower is better)
Translates to: RARVAFRLPGQLVDV*IREVVGSAPEMQPE
Trigger: TTCCGGTTGCATCTCGGGAGCACTCCCCACAACCTCACGGATGCAAACATCCACGAGCTGGCCCGGAAGACGGAAGGCTACTCGGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000564399.1
CDS GCA 90 bp TCCTCTGCTTTCACACACCCTGAGATGGCCACACTCCAGAAGAGCTaGAGGGAGGGGACAGTGGGTGCAGCCCCCATGGCACTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: SSAFTHPEMATLQKS*REGTVGAAPMALAL
Trigger: GAGGGCCAGTGCCATGGGGGCTGCACCCACTGTCCCCTCCCTGCAGCTCTTCTGGAGTGTGGCCATCTCAGGGTGTGTGAAAGCAGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS GCA 90 bp GATGCTGGCGGCACATCCTCAACAAGCCAGCCTCACAAAGGGCTCTaGTTGGCAGGCAGACGGGAAGACTCCAGGGAAAAGGGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: DAGGTSSTSQPHKGL*LAGRREDSREKGPG
Trigger: GCCTGGCCCCTTTTCCCTGGAGTCTTCCCGTCTGCCTGCCAAGCAGAGCCCTTTGTGAGGCTGGCTTGTTGAGGATGTGCCGCCAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS CCA 90 bp CCTCCTTGGCCCCCTCCAGCCCGGCCACGTCGTTCCACCGTATGTTaGGCTTCTCCATCACGACGGCACCCATCAGCTGTTCTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: PPWPPPARPRRSTVC*ASPSRRHPSAVLAV
Trigger: AACTGCAAGAACAGCTGATGGGTGCCGTCGTGATGGAGAAGCCCAACATACGGTGGAACGACGTGGCCGGGCTGGAGGGGGCCAAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 90 bp CTGGCGGCACATCCTCAACAAGCCAGCCTCACAAAGGGCTCTGCTTaGCAGGCAGACGGGAAGACTCCAGGGAAAAGGGGCCAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LAAHPQQASLTKGSA*QADGKTPGKRGQAA
Trigger: TGCAGCCTGGCCCCTTTTCCCTGGAGTCTTCCCGTCTGCCTGCCAAGCAGAGCCCTTTGTGAGGCTGGCTTGTTGAGGATGTGCCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS-3UTR CAA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACCGCCAGGGGGTGCGCTaGCCTGTGAACAAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHRQGVR*PVNKCG
Trigger: CCCACACTTGTTCACAGGCAAGCGCACCCCCTGGCG...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGAGAGCTTGGGCTGGGGTaGCAGGGGCATCAGCCAATC +
Preference number: 5 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRELGLG*QGHQPI
Trigger: GATTGGCTGATGCCCCTGCAACCCCAGCCCAAGCTC...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS TCA 90 bp AGTAGCCTTCCGTCTTCCGGGCCAGCTCGTGGATGTTTGCATCCGTaGGGTTGTGGGGAGTGCTCCCGAGATGCAACCGGAACATCTGGG +
Preference number: 5 (lower is better)
Translates to: SSLPSSGPARGCLHP*GCGECSRDATGTSG
Trigger: CCCAGATGTTCCGGTTGCATCTCGGGAGCACTCCCCACAACCTCACGGATGCAAACATCCACGAGCTGGCCCGGAAGACGGAAGGCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000564399.1
CDS GCA 90 bp CAGACCTTTTTGAAGTGTGTGGCCGACTGCACCTTCCTCACGGGCTaGATGAGAGAGTCCCGCACGATGATGCTGATGTCCGCGCCCGAG +
Preference number: 5 (lower is better)
Translates to: QTFLKCVADCTFLTG*MRESRTMMLMSAPE
Trigger: CTCGGGCGCGGACATCAGCATCATCGTGCGGGACTCTCTCATGCAGCCCGTGAGGAAGGTGCAGTCGGCCACACACTTCAAAAAGGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 90 bp GGGTCCCTAGCATCTGAGGAGGACGGGCTCCTTCAGAACTCGGGCTaGGTGGTCCGAGCGACTCATGATTTGCATGGGACTCTGGCAATC +
Preference number: 5 (lower is better)
Translates to: GSLASEEDGLLQNSG*VVRATHDLHGTLAI
Trigger: GATTGCCAGAGTCCCATGCAAATCATGAGTCGCTCGGACCACCCAGCCCGAGTTCTGAAGGAGCCCGTCCTCCTCAGATGCTAGGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS-3UTR CAA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGAATGCTCTCCTTGGCCTaGTCGCTGTGGGCCTCATAC +
Preference number: 5 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRMLSLA*SLWASY
Trigger: GTATGAGGCCCACAGCGACAAGGCCAAGGAGAGCAT...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACAGCCCTGTCTGGCTGTaGACATGGGGAGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHSPVWL*TWGVPG
Trigger: TCCAGGCACTCCCCATGTCAACAGCCAGACAGGGCT...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGACGCAGGGCTCCCACTTaGCAGTCTCTGATCTGTAGG +
Preference number: 5 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRRRAPT*QSLICR
Trigger: CCTACAGATCAGAGACTGCAAAGTGGGAGCCCTGCG...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGATCCCAGCTGCTATGGTaGAGGGGTAACCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRSQLLW*RGNLPA
Trigger: TGCTGGCAGGTTACCCCTCAACCATAGCAGCTGGGA...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 90 bp TCTTCACTTTCAGGAGGTCGTCTGCATTCACCGTGGGCCGGGTGGTaGCCAGAGACCGCAGCATGTCCGACATGCAAACCACAGGCTCTA +
Preference number: 5 (lower is better)
Translates to: SSLSGGRLHSPWAGW*PETAACPTCKPQAL
Trigger: TAGAGCCTGTGGTTTGCATGTCGGACATGCTGCGGTCTCTGGCCACCACCCGGCCCACGGTGAATGCAGACGACCTCCTGAAAGTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000566354.1
CDS CCA 90 bp CACAGTGCTGACGGAGGAGGCCGCAGCAGGGTTAAGACAGTAAAGTaGCCCTGTCCTCTGCTTTCACACACCCTGAGATGGCCACACTCC +
Preference number: 5 (lower is better)
Translates to: HSADGGGRSRVKTVK*PCPLLSHTLRWPHS
Trigger: GGAGTGTGGCCATCTCAGGGTGTGTGAAAGCAGAGGACAGGGCCACTTTACTGTCTTAACCCTGCTGCGGCCTCCTCCGTCAGCACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS-3UTR CAA 90 bp GAAGAGCAGTGTCCACTGTGTGCCCCAGGGCAGTGGAGTGTCTCTGTGGCTGCAAAGAAGGTGGAGTTGTaGGCCTCTGTTGCCACGGCT +
Preference number: 5 (lower is better)
Translates to: EEQCPLCAPGQWSVSVAAKKVEL*ASVATA
Trigger: AGCCGTGGCAACAGAGGCCAACAACTCCACCTTCTT...TGCAGCCACAGAGACACTCCACTGCCCTGGGGCACACAGTGGACACTGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS TCA 90 bp GAAGCCTCCAGCCCTGGCTTCTCCTGGGGAAGACTCACCTCCTCCTaGTGGCCGAATCCAACACCCATGGGATGTTTGTGGCTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: EASSPGFSWGRLTSS*WPNPTPMGCLWLQE
Trigger: TTCTTGGAGCCACAAACATCCCATGGGTGTTGGATTCGGCCATCAGGAGGAGGTGAGTCTTCCCCAGGAGAAGCCAGGGCTGGAGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS GCA 90 bp TATGTCTTTTTGAAGTGTGTGGCCGACTGCACCTTCCTCACGGGCTaGATGAGAGAGTCCCGCACGATGATGCTGATGTCCGCGCCCGAG +
Preference number: 5 (lower is better)
Translates to: YVFLKCVADCTFLTG*MRESRTMMLMSAPE
Trigger: CTCGGGCGCGGACATCAGCATCATCGTGCGGGACTCTCTCATGCAGCCCGTGAGGAAGGTGCAGTCGGCCACACACTTCAAAAAGACATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564399.1
CDS CCA 90 bp ATTTCTTCACTTTCAGGAGGTCGTCTGCATTCACCGTGGGCCGGGTaGTGGCCAGAGACCGCAGCATGTCCGACATGCAAACCACAGGCT +
Preference number: 5 (lower is better)
Translates to: ISSLSGGRLHSPWAG*WPETAACPTCKPQA
Trigger: AGCCTGTGGTTTGCATGTCGGACATGCTGCGGTCTCTGGCCACCACCCGGCCCACGGTGAATGCAGACGACCTCCTGAAAGTGAAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000566354.1
CDS-3UTR CAA 90 bp GGATGGGGGACCCCTTCTGTACAGAGCAGCCTCTACTTAGTGGCCGCTGACAGGCTGGCCCAACCAGGTTaGAAAGGTAGAGGAGCAGTA +
Preference number: 5 (lower is better)
Translates to: GWGTPSVQSSLYLVAADRLAQPG*KGRGAV
Trigger: TACTGCTCCTCTACCTTTCAAACCTGGTTGGGCCAG...CCTGTCAGCGGCCACTAAGTAGAGGCTGCTCTGTACAGAAGGGGTCCCCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 90 bp ACTCCACCGCATGCTGGTACAGCCGCAGCGCCTCCTCGTAGTTCTTaGCTTTGTCCTCCTCTGTGGCTTTCGTCACCAGATCAATGGCTT +
Preference number: 5 (lower is better)
Translates to: TPPHAGTAAAPPRSS*LCPPLWLSSPDQWL
Trigger: AAGCCATTGATCTGGTGACGAAAGCCACAGAGGAGGACAAAGCCAAGAACTACGAGGAGGCGCTGCGGCTGTACCAGCATGCGGTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 90 bp CCTCTGAGAATTTCTTCACTTTCAGGAGGTCGTCTGCATTCACCGTaGGCCGGGTGGTGGCCAGAGACCGCAGCATGTCCGACATGCAAA +
Preference number: 5 (lower is better)
Translates to: PLRISSLSGGRLHSP*AGWWPETAACPTCK
Trigger: TTTGCATGTCGGACATGCTGCGGTCTCTGGCCACCACCCGGCCCACGGTGAATGCAGACGACCTCCTGAAAGTGAAGAAATTCTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000566354.1
CDS-3UTR CAA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGATCTGGAGGGTTGACGTaGTCATTTCATCTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRSGGLT*SFHLLG
Trigger: ACCCAGGAGATGAAATGACAACGTCAACCCTCCAGA...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCATTTGCATCCGTGAGGTaGTGGGGAGTGCTCCCGAGA +
Preference number: 5 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTAFASVR*WGVLPR
Trigger: TCTCGGGAGCACTCCCCACAACCTCACGGATGCAAA...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACAGAGGGAACTCTGTATaGACTGGGACAAGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHRGNSV*TGTSPG
Trigger: TCCAGGGCTTGTCCCAGTCAATACAGAGTTCCCTCT...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 90 bp ACAGCCGCAGCGCCTCCTCGTAGTTCTTGGCTTTGTCCTCCTCTGTaGCTTTCGTCACCAGATCAATGGCTTTCTGGAGGGTTGACGTTG +
Preference number: 5 (lower is better)
Translates to: TAAAPPRSSWLCPPL*LSSPDQWLSGGLTL
Trigger: CAACGTCAACCCTCCAGAAAGCCATTGATCTGGTGACGAAAGCCACAGAGGAGGACAAAGCCAAGAACTACGAGGAGGCGCTGCGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 90 bp AATAATCCTTCAGCTTCTCGGCCCGGTCTAGGTACTGCACGCACTTaGCTCGAATGCTCTCCTTGGCCTTGTCGCTGTGGGCCTCATACT +
Preference number: 5 (lower is better)
Translates to: NNPSASRPGLGTART*LECSPWPCRCGPHT
Trigger: AGTATGAGGCCCACAGCGACAAGGCCAAGGAGAGCATTCGAGCCAAGTGCGTGCAGTACCTAGACCGGGCCGAGAAGCTGAAGGATTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCATCACTGTCACTGCCCTaGCCCTCACTCTGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTASLSLP*PSLWFS
Trigger: AGAGAACCAGAGTGAGGGCAAGGGCAGTGACAGTGA...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCATCGTTCCACCGTATGTaGGGCTTCTCCATCACGACG +
Preference number: 5 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTASFHRM*GFSITT
Trigger: CGTCGTGATGGAGAAGCCCAACATACGGTGGAACGA...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCACGTCAGTGGTTCCTGTaGCTGGTCATGGAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTARQWFL*LVMERD
Trigger: GTCTCTCTCCATGACCAGCAACAGGAACCACTGACG...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS GCA 90 bp TTTCTTCCCAGTCTCGGGTATGTCTTTTTGAAGTGTGTGGCCGACTaGACCTTCCTCACGGGCTGCATGAGAGAGTCCCGCACGATGATG +
Preference number: 5 (lower is better)
Translates to: FLPSLGYVFLKCVAD*TFLTGCMRESRTMM
Trigger: CATCATCGTGCGGGACTCTCTCATGCAGCCCGTGAGGAAGGTGCAGTCGGCCACACACTTCAAAAAGACATACCCGAGACTGGGAAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564399.1
CDS-3UTR CAA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCACTGTGGGCCTCATACTaGATAGCGTGGAGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTALWASY*IAWRKY
Trigger: GTACTTCCTCCACGCTATCAAGTATGAGGCCCACAG...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACACCCATCAGCTGTTCTaGCAGTTTCTTTTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHTHQLF*QFLFLR
Trigger: CCGGAGAAAAAGAAACTGCAAGAACAGCTGATGGGT...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCAGGGGAGTGCCTGGATTaGCCCCAATCAACCTCCCAC +
Preference number: 5 (lower is better)
Translates to: PLHMSACLTSMMAGCVLAGECLD*PQSTSH
Trigger: GTGGGAGGTTGATTGGGGCAAATCCAGGCACTCCCC...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGAAAAATCTCTCCCACTTaGAGCAGGAAGCACTCACAA +
Preference number: 5 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRKISPT*SRKHSQ
Trigger: TTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTT...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS TCA 90 bp GATGATGGAATGGTATTCACGGAAGGGGAGGCACGAAGATTTGAGTaGAACGGACGCATTTCATGGGCCAGTGATGCTGGCGGCACATCC +
Preference number: 5 (lower is better)
Translates to: DDGMVFTEGEARRFE*NGRISWASDAGGTS
Trigger: GGATGTGCCGCCAGCATCACTGGCCCATGAAATGCGTCCGTTTCACTCAAATCTTCGTGCCTCCCCTTCCGTGAATACCATTCCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS CCA 90 bp GACTGTCTCCCCACCAACAACGGAAGGTCTAGGATTTTTGTCTGTTaGTCACTCATATCTTCCCAGCACTTAGGACAGGGCCGGGCACAC +
Preference number: 5 (lower is better)
Translates to: DCLPTNNGRSRIFVC*SLISSQHLGQGRAH
Trigger: GTGTGCCCGGCCCTGTCCTAAGTGCTGGGAAGATATGAGTGACCAACAGACAAAAATCCTAGACCTTCCGTTGTTGGTGGGGAGACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS-3UTR CAA 90 bp TTCCAGGACAGGGACCCAGGGGCAGTGGCTGGGTTCAGTGTTCTCACGCTCAGATTGGAACAAAGCCCTTaGCAGGCTATAAGCTTCATT +
Preference number: 5 (lower is better)
Translates to: FQDRDPGAVAGFSVLTLRLEQSP*QAISFI
Trigger: AATGAAGCTTATAGCCTGCAAAGGGCTTTGTTCCAA...TCTGAGCGTGAGAACACTGAACCCAGCCACTGCCCCTGGGTCCCTGTCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 90 bp CCTGGGGAAGACTCACCTCCTCCTGATGGCCGAATCCAACACCCATaGGATGTTTGTGGCTCCAAGAACCAGAGTCCCATCATTGTTATT +
Preference number: 5 (lower is better)
Translates to: PGEDSPPPDGRIQHP*DVCGSKNQSPIIVI
Trigger: AATAACAATGATGGGACTCTGGTTCTTGGAGCCACAAACATCCCATGGGTGTTGGATTCGGCCATCAGGAGGAGGTGAGTCTTCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS-3UTR CAA 90 bp CTTTGGTCTGTTTATATGCATGGGGTAAACGTGGGACAGCCTCTGCAGCTTCACAAAATGACAGCTTCTTaGAGGGCCTCCTTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LWSVYMHGVNVGQPLQLHKMTAS*RASLAP
Trigger: GGGGGCCAAGGAGGCCCTCAAAGAAGCTGTCATTTT...GTGAAGCTGCAGAGGCTGTCCCACGTTTACCCCATGCATATAAACAGACCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp CCTCTGCACATGTCAGCATGTTTAACATCGATGATGGCAGGTTGTGTGCTGGCAGAGAAGAAGGTGGAGTaGTTGGCCTCTGTTGCCACG +
Preference number: 5 (lower is better)
Translates to: PLHMSACLTSMMAGCVLAEKKVE*LASVAT
Trigger: CGTGGCAACAGAGGCCAACAACTCCACCTTCTTCTC...TGCCAGCACACAACCTGCCATCATCGATGTTAAACATGCTGACATGTGCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTACCAAGAACTCCGTTTaGATCCTCCGGGCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESTKNSV*ILRAAS
Trigger: TGAGGCCGCCCGGAGGATCAAAACGGAGTTCTTGGT...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp TGGCTGAGGGCACATAACCAAGAACTTACACAAGCACCCCCAAGCCACAAAGATTATGTCACTCGGTCTTaGAGGCAGAGCTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: WLRAHNQELTQAPPSHKDYVTRS*RQSLGW
Trigger: CCAGCCCAAGCTCTGCCTCAAAGACCGAGTGACATA...ATCTTTGTGGCTTGGGGGTGCTTGTGTAAGTTCTTGGTTATGTGCCCTCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 90 bp GGTCTTCCTGGTCATTTTATATCCAACACTTTCCAAACACTGATTTaGTGTCCACCCCGCACAAGAGCACACAGTGCTGACGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: GLPGHFISNTFQTLI*CPPRTRAHSADGGG
Trigger: GCCTCCTCCGTCAGCACTGTGTGCTCTTGTGCGGGGTGGACACCAAATCAGTGTTTGGAAAGTGTTGGATATAAAATGACCAGGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS-3UTR CAA 90 bp CTTAAGGGGAGGAGGCCTTGCACACCTGACTGGAGAACAGGCCTAAGAACTGCATCTTTGACTGGCTTCTaGCCGTGTTTCTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: LKGRRPCTPDWRTGLRTASLTGF*PCFSLL
Trigger: AAGCAAAGAGAAACACGGCAAGAAGCCAGTCAAAGA...TGCAGTTCTTAGGCCTGTTCTCCAGTCAGGTGTGCAAGGCCTCCTCCCCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACAACAAGTGTGGGAATTaGATTGGCAAAATGACAGCT +
Preference number: 5 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHNKCGN*IGKMTA
Trigger: AGCTGTCATTTTGCCAATCAAATTCCCACACTTGTT...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACATCATCATGCTGGGGTaGGTGCGAGAGGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNIIMLG*VREGPQ
Trigger: CTGTGGCCCCTCTCGCACCAACCCCAGCATGATGAT...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTCTCAAGGAGCAAAACTaGGGCGTAAAAGGAACGGGC +
Preference number: 5 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESLKEQN*GVKGTG
Trigger: GCCCGTTCCTTTTACGCCCAAGTTTTGCTCCTTGAG...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp GACCAAACCAAACAAACACAGCTGCAGGACGGGTCTGGTACGCAGGGCTCCCACCTGTGTGAATGTGCTTaGACTTTGGTCTGTTTATAT +
Preference number: 5 (lower is better)
Translates to: DQTKQTQLQDGSGTQGSHLCECA*TLVCLY
Trigger: ATATAAACAGACCAAAGTCAAAGCACATTCACACAG...GTGGGAGCCCTGCGTACCAGACCCGTCCTGCAGCTGTGTTTGTTTGGTTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS TCA 90 bp AGACAGGTCTTCCTGGTCATTTTATATCCAACACTTTCCAAACACTaGTTTGGTGTCCACCCCGCACAAGAGCACACAGTGCTGACGGAG +
Preference number: 5 (lower is better)
Translates to: RQVFLVILYPTLSKH*FGVHPAQEHTVLTE
Trigger: CTCCGTCAGCACTGTGTGCTCTTGTGCGGGGTGGACACCAAATCAGTGTTTGGAAAGTGTTGGATATAAAATGACCAGGAAGACCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS-3UTR CAA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAAGCTCGAATGCTCTCCTaGGCCTTGTCGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: YCISSKISPTLSRKHSQKARMLS*ALSLWA
Trigger: GGCCCACAGCGACAAGGCCAAGGAGAGCATTCGAGC...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp GACAGAAAACCAGAGGGTCTTTTAATTGGAAGCAAGGGTGGCCCTTCAGAGTCTTCACTCTGGTTCTCTTaGACTGGCTTCTTGCCGTGT +
Preference number: 5 (lower is better)
Translates to: DRKPEGLLIGSKGGPSESSLWFS*TGFLPC
Trigger: ACACGGCAAGAAGCCAGTCAAAGAGAACCAGAGTGA...AGACTCTGAAGGGCCACCCTTGCTTCCAATTAAAAGACCCTCTGGTTTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS TCA 90 bp CTTCACTGTCACTGTCACTGCCCTTGCCCTCACTCTGGTTCTCTTTaGCTGGCTTCTTGCCGTGTTTCTCTTTGCTTCGTAAATAATCCT +
Preference number: 5 (lower is better)
Translates to: LHCHCHCPCPHSGSL*LASCRVSLCFVNNP
Trigger: AGGATTATTTACGAAGCAAAGAGAAACACGGCAAGAAGCCAGTCAAAGAGAACCAGAGTGAGGGCAAGGGCAGTGACAGTGACAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS TCA 90 bp ATTGCCCAAGTGAAGCAGCTTTTAACTCTCTTGCCCAAAGTCCTCTaGGAATTTCTTCACTTTCAGGAGGTCGTCTGCATTCACCGTGGG +
Preference number: 5 (lower is better)
Translates to: IAQVKQLLTLLPKVL*EFLHFQEVVCIHRG
Trigger: CCCACGGTGAATGCAGACGACCTCCTGAAAGTGAAGAAATTCTCAGAGGACTTTGGGCAAGAGAGTTAAAAGCTGCTTCACTTGGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000566354.1
CDS-3UTR CAA 90 bp AATTTCAGAGCATTTCAGGGAGGAAACTCCTCTGCACATGTCAGCATGTTTAACAGGTACTGCACGCACTaGGCTCGAATGCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: NFRAFQGGNSSAHVSMFNRYCTH*ARMLSL
Trigger: CAAGGAGAGCATTCGAGCCAAGTGCGTGCAGTACCT...GTTAAACATGCTGACATGTGCAGAGGAGTTTCCTCCCTGAAATGCTCTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAAAAGATGATGGAGGGCTaGTGCTGCCTGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: YCISSKISPTLSRKHSQKKMMEG*CCLASS
Trigger: TGAGCTGGCCAGGCAGCACAAGCCCTCCATCATCTT...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS TCA 90 bp AAAAGTGTGATATGGTTTAGCTGTGCCCCCACCCACATTTCAACTTaGACTGTATCTATCTCCCAGAATTCCCACATGTTGTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: KSVIWFSCAPTHIST*TVSISQNSHMLWEG
Trigger: TCCCTCCCACAACATGTGGGAATTCTGGGAGATAGATACAGTTCAAGTTGAAATGTGGGTGGGGGCACAGCTAAACCATATCACACTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS CCA 90 bp AATTCGTTTTTCAAACCTCCTCCTGATGGCCGAATCCAACACCCATaGGATGTTTGTGGCTCCAAGAACCAGAGTCCCATCATTGTTATT +
Preference number: 5 (lower is better)
Translates to: NSFFKPPPDGRIQHP*DVCGSKNQSPIIVI
Trigger: AATAACAATGATGGGACTCTGGTTCTTGGAGCCACAAACATCCCATGGGTGTTGGATTCGGCCATCAGGAGGAGGTTTGAAAAACGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGGGGCCACAGACCTTTTaGAAGTGTGTGGCCGACTGC +
Preference number: 5 (lower is better)
Translates to: KCKLYCISSKISPTLSRKGPQTF*KCVADC
Trigger: GCAGTCGGCCACACACTTCAAAAAGGTCTGTGGCCC...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp TATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGCACTCACAAAAACACTGGAGCCAAGTGTaGGAGCTACTGATCCAAAGT +
Preference number: 5 (lower is better)
Translates to: YCISSKISPTLSRKHSQKHWSQV*ELLIQS
Trigger: ACTTTGGATCAGTAGCTCCAACACTTGGCTCCAGTG...TTTTTGTGAGTGCTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS-3UTR CAA 90 bp AAATGCAAACTTTATTGCATTTCCAGTAAAATCTCTCCCACTTTGAGCAGGAAGAGCTCAAACAGGTTCTaGACCAGCTTTTCACTCTCC +
Preference number: 5 (lower is better)
Translates to: KCKLYCISSKISPTLSRKSSNRF*TSFSLS
Trigger: GGAGAGTGAAAAGCTGGTCAAGAACCTGTTTGAGCT...CTTCCTGCTCAAAGTGGGAGAGATTTTACTGGAAATGCAATAAAGTTTGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS GCA 72 bp GGCAGACGGGAAGACTCCAGGGAAAAGGGGCCAGGCTaGACCCGGGCTGCCAGCAGCAGGCGGACCGTGACC +
Preference number: 6 (lower is better)
Translates to: GRREDSREKGPG*TRAASSRRTVT
Trigger: GGTCACGGTCCGCCTGCTGCTGGCAGCCCGGGTGCAGCCTGGCCCCTTTTCCCTGGAGTCTTCCCGTCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS GCA 72 bp AGACTCCAGGGAAAAGGGGCCAGGCTGCACCCGGGCTaGCAGCAGCAGGCGGACCGTGACCATGGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: RLQGKGARLHPG*QQQADRDHGGR
Trigger: CCTCCCACCATGGTCACGGTCCGCCTGCTGCTGGCAGCCCGGGTGCAGCCTGGCCCCTTTTCCCTGGAGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS CAA 72 bp GCCCCCTCCAGCCCGGCCACGTCGTTCCACCGTATGTaGGGCTTCTCCATCACGACGGCACCCATCAGCTGT +
Preference number: 6 (lower is better)
Translates to: APSSPATSFHRM*GFSITTAPISC
Trigger: ACAGCTGATGGGTGCCGTCGTGATGGAGAAGCCCAACATACGGTGGAACGACGTGGCCGGGCTGGAGGGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS GCA 72 bp CTGTTGCCACGGCTTTGGCCAGGTAGGATTTCCCTGTaGCAGGGGGTCCGAACAGCAGAATCCCCCGCCAGG +
Preference number: 6 (lower is better)
Translates to: LLPRLWPGRISL*QGVRTAESPAR
Trigger: CCTGGCGGGGGATTCTGCTGTTCGGACCCCCTGGCACAGGGAAATCCTACCTGGCCAAAGCCGTGGCAACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 72 bp CCCCCTCCAGCCCGGCCACGTCGTTCCACCGTATGTTaGGCTTCTCCATCACGACGGCACCCATCAGCTGTT +
Preference number: 6 (lower is better)
Translates to: PPPARPRRSTVC*ASPSRRHPSAV
Trigger: AACAGCTGATGGGTGCCGTCGTGATGGAGAAGCCCAACATACGGTGGAACGACGTGGCCGGGCTGGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 72 bp CGGACCGTGACCATGGTGGGAGGAAGCCTCCAGCCCTaGCTTCTCCTGGGGAAGACTCACCTCCTCCTGATG +
Preference number: 6 (lower is better)
Translates to: RTVTMVGGSLQP*LLLGKTHLLLM
Trigger: CATCAGGAGGAGGTGAGTCTTCCCCAGGAGAAGCCAGGGCTGGAGGCTTCCTCCCACCATGGTCACGGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS CAA 90 bp GCCTCCTTGGCCCCCTCCAGCCCGGCCACGTCGTTCCACCGTATGTaGGGCTTCTCCATCACGACGGCACCCATCAGCTGTTCTTGCAGT +
Preference number: 6 (lower is better)
Translates to: ASLAPSSPATSFHRM*GFSITTAPISCSCS
Trigger: ACTGCAAGAACAGCTGATGGGTGCCGTCGTGATGGAGAAGCCCAACATACGGTGGAACGACGTGGCCGGGCTGGAGGGGGCCAAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS TCA 72 bp CCGTCTTCCGGGCCAGCTCGTGGATGTTTGCATCCGTaGGGTTGTGGGGAGTGCTCCCGAGATGCAACCGGA +
Preference number: 6 (lower is better)
Translates to: PSSGPARGCLHP*GCGECSRDATG
Trigger: TCCGGTTGCATCTCGGGAGCACTCCCCACAACCTCACGGATGCAAACATCCACGAGCTGGCCCGGAAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000564399.1
CDS GCA 72 bp TTTGCATCCGTGAGGTTGTGGGGAGTGCTCCCGAGATaGAACCGGAACATCTGGGCGCGGGCAGCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: FASVRLWGVLPR*NRNIWARAASS
Trigger: GGAGGAAGCTGCCCGCGCCCAGATGTTCCGGTTGCATCTCGGGAGCACTCCCCACAACCTCACGGATGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS GCA 72 bp CCGCGGGCACTCACCTTTTTGAAGTGTGTGGCCGACTaGACCTTCCTCACGGGCTGCATGAGAGAGTCCCGC +
Preference number: 6 (lower is better)
Translates to: PRALTFLKCVAD*TFLTGCMRESR
Trigger: GCGGGACTCTCTCATGCAGCCCGTGAGGAAGGTGCAGTCGGCCACACACTTCAAAAAGGTGAGTGCCCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS CCA 72 bp TCAGGAGGTCGTCTGCATTCACCGTGGGCCGGGTGGTaGCCAGAGACCGCAGCATGTCCGACATGCAAACCA +
Preference number: 6 (lower is better)
Translates to: SGGRLHSPWAGW*PETAACPTCKP
Trigger: TGGTTTGCATGTCGGACATGCTGCGGTCTCTGGCCACCACCCGGCCCACGGTGAATGCAGACGACCTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000566354.1
CDS GCA 72 bp CGGCCCGGTCTAGGTACTGCACGCACTTGGCTCGAATaGTCTCCTTGGCCTTGTCGCTGTGGGCCTCATACT +
Preference number: 6 (lower is better)
Translates to: RPGLGTARTWLE*SPWPCRCGPHT
Trigger: AGTATGAGGCCCACAGCGACAAGGCCAAGGAGAGCATTCGAGCCAAGTGCGTGCAGTACCTAGACCGGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS GCA 72 bp GTAGCCTTCCGTCTTCCGGGCCAGCTCGTGGATGTTTaGATCCGTGAGGTTGTGGGGAGTGCTCCCGAGATG +
Preference number: 6 (lower is better)
Translates to: VAFRLPGQLVDV*IREVVGSAPEM
Trigger: CATCTCGGGAGCACTCCCCACAACCTCACGGATGCAAACATCCACGAGCTGGCCCGGAAGACGGAAGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000564399.1
CDS GCA 72 bp GAGGGGCCACAGACCTTTTTGAAGTGTGTGGCCGACTaGACCTTCCTCACGGGCTGCATGAGAGAGTCCCGC +
Preference number: 6 (lower is better)
Translates to: EGPQTFLKCVAD*TFLTGCMRESR
Trigger: GCGGGACTCTCTCATGCAGCCCGTGAGGAAGGTGCAGTCGGCCACACACTTCAAAAAGGTCTGTGGCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 72 bp TCAGCTTCTCGGCCCGGTCTAGGTACTGCACGCACTTaGCTCGAATGCTCTCCTTGGCCTTGTCGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: SASRPGLGTART*LECSPWPCRCG
Trigger: CCCACAGCGACAAGGCCAAGGAGAGCATTCGAGCCAAGTGCGTGCAGTACCTAGACCGGGCCGAGAAGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 72 bp CGGGCCAGCTCGTGGATGTTTGCATCCGTGAGGTTGTaGGGAGTGCTCCCGAGATGCAACCGGAACATCTGG +
Preference number: 6 (lower is better)
Translates to: RASSWMFASVRL*GVLPRCNRNIW
Trigger: CCAGATGTTCCGGTTGCATCTCGGGAGCACTCCCCACAACCTCACGGATGCAAACATCCACGAGCTGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000564399.1
CDS CCA 72 bp CTTTCAGGAGGTCGTCTGCATTCACCGTGGGCCGGGTaGTGGCCAGAGACCGCAGCATGTCCGACATGCAAA +
Preference number: 6 (lower is better)
Translates to: LSGGRLHSPWAG*WPETAACPTCK
Trigger: TTTGCATGTCGGACATGCTGCGGTCTCTGGCCACCACCCGGCCCACGGTGAATGCAGACGACCTCCTGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000566354.1
CDS CCA 72 bp CTGAGGAGGACGGGCTCCTTCAGAACTCGGGCTGGGTaGTCCGAGCGACTCATGATTTGCATGGGACTCTGG +
Preference number: 6 (lower is better)
Translates to: LRRTGSFRTRAG*SERLMICMGLW
Trigger: CCAGAGTCCCATGCAAATCATGAGTCGCTCGGACCACCCAGCCCGAGTTCTGAAGGAGCCCGTCCTCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS CCA 72 bp ATTTCTTCACTTTCAGGAGGTCGTCTGCATTCACCGTaGGCCGGGTGGTGGCCAGAGACCGCAGCATGTCCG +
Preference number: 6 (lower is better)
Translates to: ISSLSGGRLHSP*AGWWPETAACP
Trigger: CGGACATGCTGCGGTCTCTGGCCACCACCCGGCCCACGGTGAATGCAGACGACCTCCTGAAAGTGAAGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000566354.1
CDS CCA 72 bp CATCCTCAACAAGCCAGCCTCACAAAGGGCTCTGCTTaGCAGGCAGACGGGAAGACTCCAGGGAAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: HPQQASLTKGSA*QADGKTPGKRG
Trigger: GCCCCTTTTCCCTGGAGTCTTCCCGTCTGCCTGCCAAGCAGAGCCCTTTGTGAGGCTGGCTTGTTGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS CCA 72 bp GCATCTGAGGAGGACGGGCTCCTTCAGAACTCGGGCTaGGTGGTCCGAGCGACTCATGATTTGCATGGGACT +
Preference number: 6 (lower is better)
Translates to: ASEEDGLLQNSG*VVRATHDLHGT
Trigger: AGTCCCATGCAAATCATGAGTCGCTCGGACCACCCAGCCCGAGTTCTGAAGGAGCCCGTCCTCCTCAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS CAA 72 bp TTCAGCTTCTCGGCCCGGTCTAGGTACTGCACGCACTaGGCTCGAATGCTCTCCTTGGCCTTGTCGCTGTGG +
Preference number: 6 (lower is better)
Translates to: FSFSARSRYCTH*ARMLSLALSLW
Trigger: CCACAGCGACAAGGCCAAGGAGAGCATTCGAGCCAAGTGCGTGCAGTACCTAGACCGGGCCGAGAAGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS TCA 72 bp AGCCCTGGCTTCTCCTGGGGAAGACTCACCTCCTCCTaGTGGCCGAATCCAACACCCATGGGATGTTTGTGG +
Preference number: 6 (lower is better)
Translates to: SPGFSWGRLTSS*WPNPTPMGCLW
Trigger: CCACAAACATCCCATGGGTGTTGGATTCGGCCATCAGGAGGAGGTGAGTCTTCCCCAGGAGAAGCCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS TCA 72 bp CCCACATGTTGTGGGAGGGACCCAGGGGGAGGTAACTaGATCATGGGGGCTGGTCTTTCCCGTGCTATTCTC +
Preference number: 6 (lower is better)
Translates to: PTCCGRDPGGGN*IMGAGLSRAIL
Trigger: GAGAATAGCACGGGAAAGACCAGCCCCCATGATTCAGTTACCTCCCCCTGGGTCCCTCCCACAACATGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000564399.1
ENST00000566354.1
CDS TCA 72 bp AGTCCCAAAGAGAATGCTCTGTGGGTCCCTAGCATCTaGGGAGGACGGGCTCCTTCAGAACTCGGGCTGGGT +
Preference number: 6 (lower is better)
Translates to: SPKENALWVPSI*GGRAPSELGLG
Trigger: ACCCAGCCCGAGTTCTGAAGGAGCCCGTCCTCCTCAGATGCTAGGGACCCACAGAGCATTCTCTTTGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS GCA 72 bp TTGAAGTGTGTGGCCGACTGCACCTTCCTCACGGGCTaGATGAGAGAGTCCCGCACGATGATGCTGATGTCC +
Preference number: 6 (lower is better)
Translates to: LKCVADCTFLTG*MRESRTMMLMS
Trigger: GGACATCAGCATCATCGTGCGGGACTCTCTCATGCAGCCCGTGAGGAAGGTGCAGTCGGCCACACACTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000564399.1
CDS CCA 72 bp GACGGAGGAGGCCGCAGCAGGGTTAAGACAGTAAAGTaGCCCTGTCCTCTGCTTTCACACACCCTGAGATGG +
Preference number: 6 (lower is better)
Translates to: DGGGRSRVKTVK*PCPLLSHTLRW
Trigger: CCATCTCAGGGTGTGTGAAAGCAGAGGACAGGGCCACTTTACTGTCTTAACCCTGCTGCGGCCTCCTCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS CAA 72 bp GATTTTTCTCAGCAGTGGCCGCGGGCACTCACCTTTTaGAAGTGTGTGGCCGACTGCACCTTCCTCACGGGC +
Preference number: 6 (lower is better)
Translates to: DFSQQWPRALTF*KCVADCTFLTG
Trigger: GCCCGTGAGGAAGGTGCAGTCGGCCACACACTTCAAAAAGGTGAGTGCCCGCGGCCACTGCTGAGAAAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS CAA 90 bp CCTGTGAACAAGTGTGGGAATTTGATTGGCAAAATGACAGCTTCTTaGAGGGCCTCCTTGGCCCCCTCCAGCCCGGCCACGTCGTTCCAC +
Preference number: 6 (lower is better)
Translates to: PVNKCGNLIGKMTAS*RASLAPSSPATSFH
Trigger: GTGGAACGACGTGGCCGGGCTGGAGGGGGCCAAGGAGGCCCTCAAAGAAGCTGTCATTTTGCCAATCAAATTCCCACACTTGTTCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CAA 90 bp GGGCTCCTTCAGAACTCGGGCTGGGTGGTCCGAGCGACTCATGATTaGCATGGGACTCTGGCAATCTGTAGCCCCAATGCCTTGATGTCT +
Preference number: 6 (lower is better)
Translates to: GLLQNSGWVVRATHD*HGTLAICSPNALMS
Trigger: AGACATCAAGGCATTGGGGCTACAGATTGCCAGAGTCCCATGCAAATCATGAGTCGCTCGGACCACCCAGCCCGAGTTCTGAAGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS TCA 72 bp ATTTTTCTCAGCAGTGGCCGCGGGCACTCACCTTTTTaGAGTGTGTGGCCGACTGCACCTTCCTCACGGGCT +
Preference number: 6 (lower is better)
Translates to: IFLSSGRGHSPF*SVWPTAPSSRA
Trigger: AGCCCGTGAGGAAGGTGCAGTCGGCCACACACTTCAAAAAGGTGAGTGCCCGCGGCCACTGCTGAGAAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS GCA 72 bp AGTCTCGGGTATGTCTTTTTGAAGTGTGTGGCCGACTaGACCTTCCTCACGGGCTGCATGAGAGAGTCCCGC +
Preference number: 6 (lower is better)
Translates to: SLGYVFLKCVAD*TFLTGCMRESR
Trigger: GCGGGACTCTCTCATGCAGCCCGTGAGGAAGGTGCAGTCGGCCACACACTTCAAAAAGACATACCCGAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564399.1
CDS CCA 72 bp CATGCTGGTACAGCCGCAGCGCCTCCTCGTAGTTCTTaGCTTTGTCCTCCTCTGTGGCTTTCGTCACCAGAT +
Preference number: 6 (lower is better)
Translates to: HAGTAAAPPRSS*LCPPLWLSSPD
Trigger: ATCTGGTGACGAAAGCCACAGAGGAGGACAAAGCCAAGAACTACGAGGAGGCGCTGCGGCTGTACCAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 72 bp GTGAGCATGGAGTCAGGAGGTCATCAATCATCATGCTaGGGTTGGTGCGAGAGGGGCCACAGACCTGAAACC +
Preference number: 6 (lower is better)
Translates to: VSMESGGHQSSC*GWCERGHRPET
Trigger: GGTTTCAGGTCTGTGGCCCCTCTCGCACCAACCCCAGCATGATGATTGATGACCTCCTGACTCCATGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS CCA 72 bp GCGCCTCCTCGTAGTTCTTGGCTTTGTCCTCCTCTGTaGCTTTCGTCACCAGATCAATGGCTTTCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: APPRSSWLCPPL*LSSPDQWLSGG
Trigger: CCCTCCAGAAAGCCATTGATCTGGTGACGAAAGCCACAGAGGAGGACAAAGCCAAGAACTACGAGGAGGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CCA 72 bp GACTCACCTCCTCCTGATGGCCGAATCCAACACCCATaGGATGTTTGTGGCTCCAAGAACCAGAGTCCCATC +
Preference number: 6 (lower is better)
Translates to: DSPPPDGRIQHP*DVCGSKNQSPI
Trigger: GATGGGACTCTGGTTCTTGGAGCCACAAACATCCCATGGGTGTTGGATTCGGCCATCAGGAGGAGGTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS CAA 72 bp TCTAGGTACTGCACGCACTTGGCTCGAATGCTCTCCTaGGCCTTGTCGCTGTGGGCCTCATACTTGATAGCG +
Preference number: 6 (lower is better)
Translates to: SRYCTHLARMLS*ALSLWASYLIA
Trigger: CGCTATCAAGTATGAGGCCCACAGCGACAAGGCCAAGGAGAGCATTCGAGCCAAGTGCGTGCAGTACCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CAA 90 bp CAGCGGATGATGGAATGGTATTCACGGAAGGGGAGGCACGAAGATTaGAGTGAAACGGACGCATTTCATGGGCCAGTGATGCTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: QRMMEWYSRKGRHED*SETDAFHGPVMLAA
Trigger: TGCCGCCAGCATCACTGGCCCATGAAATGCGTCCGTTTCACTCAAATCTTCGTGCCTCCCCTTCCGTGAATACCATTCCATCATCCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS TCA 72 bp CATCCAAGTCATCTCCATGGCTCCTGGGTCCCCTGGTaGGCATGGAGTCAGGAGGTCATCAATCATCATGCT +
Preference number: 6 (lower is better)
Translates to: HPSHLHGSWVPW*AWSQEVINHHA
Trigger: AGCATGATGATTGATGACCTCCTGACTCCATGCTCACCAGGGGACCCAGGAGCCATGGAGATGACTTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000566354.1
CDS CCA 72 bp ATGGAGTCAGGAGGTCATCAATCATCATGCTGGGGTTaGTGCGAGAGGGGCCACAGACCTGAAACCAAATGG +
Preference number: 6 (lower is better)
Translates to: MESGGHQSSCWG*CERGHRPETKW
Trigger: CCATTTGGTTTCAGGTCTGTGGCCCCTCTCGCACCAACCCCAGCATGATGATTGATGACCTCCTGACTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS TCA 72 bp ATGGTATTCACGGAAGGGGAGGCACGAAGATTTGAGTaGAACGGACGCATTTCATGGGCCAGTGATGCTGGC +
Preference number: 6 (lower is better)
Translates to: MVFTEGEARRFE*NGRISWASDAG
Trigger: GCCAGCATCACTGGCCCATGAAATGCGTCCGTTTCACTCAAATCTTCGTGCCTCCCCTTCCGTGAATACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS TCA 72 bp TTTTCAAACCTAGAGAGCCCAGCACACGGCAGGAGTTaGCAGCGGATGATGGAATGGTATTCACGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: FSNLESPAHGRS*QRMMEWYSRKG
Trigger: CCCCTTCCGTGAATACCATTCCATCATCCGCTGTCAACTCCTGCCGTGTGCTGGGCTCTCTAGGTTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS CCA 72 bp TTCAAACCTCCTCCTGATGGCCGAATCCAACACCCATaGGATGTTTGTGGCTCCAAGAACCAGAGTCCCATC +
Preference number: 6 (lower is better)
Translates to: FKPPPDGRIQHP*DVCGSKNQSPI
Trigger: GATGGGACTCTGGTTCTTGGAGCCACAAACATCCCATGGGTGTTGGATTCGGCCATCAGGAGGAGGTTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CAA 72 bp TCACTGTCACTGCCCTTGCCCTCACTCTGGTTCTCTTaGACTGGCTTCTTGCCGTGTTTCTCTTTGCTTCGT +
Preference number: 6 (lower is better)
Translates to: SLSLPLPSLWFS*TGFLPCFSLLR
Trigger: ACGAAGCAAAGAGAAACACGGCAAGAAGCCAGTCAAAGAGAACCAGAGTGAGGGCAAGGGCAGTGACAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CAA 72 bp GGGCTTCTCCATCACGACGGCACCCATCAGCTGTTCTaGCAGTTTCTTTTTCTCCGGATTATCCCCTTCACT +
Preference number: 6 (lower is better)
Translates to: GLLHHDGTHQLF*QFLFLRIIPFT
Trigger: AGTGAAGGGGATAATCCGGAGAAAAAGAAACTGCAAGAACAGCTGATGGGTGCCGTCGTGATGGAGAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254950.13
CDS CAA 90 bp ATAAATTCGTTTTTCAAACCTAGAGAGCCCAGCACACGGCAGGAGTaGACAGCGGATGATGGAATGGTATTCACGGAAGGGGAGGCACGA +
Preference number: 6 (lower is better)
Translates to: INSFFKPREPSTRQE*TADDGMVFTEGEAR
Trigger: TCGTGCCTCCCCTTCCGTGAATACCATTCCATCATCCGCTGTCAACTCCTGCCGTGTGCTGGGCTCTCTAGGTTTGAAAAACGAATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS CAA 90 bp AGGCCAATTAAACCTCTTTTTCTTCCCAGTCTCGGGTATGTCTTTTaGAAGTGTGTGGCCGACTGCACCTTCCTCACGGGCTGCATGAGA +
Preference number: 6 (lower is better)
Translates to: RPIKPLFLPSLGYVF*KCVADCTFLTGCMR
Trigger: TCTCATGCAGCCCGTGAGGAAGGTGCAGTCGGCCACACACTTCAAAAAGACATACCCGAGACTGGGAAGAAAAAGAGGTTTAATTGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564399.1
CDS GCA 72 bp CTGGATTTGCCCCAATCAACCTCCCACCTTCACCATTaGCCAAGTGAAGCAGCTTTTAACTCTCTTGCCCAA +
Preference number: 6 (lower is better)
Translates to: LDLPQSTSHLHH*PSEAAFNSLAQ
Trigger: TTGGGCAAGAGAGTTAAAAGCTGCTTCACTTGGGCAATGGTGAAGGTGGGAGGTTGATTGGGGCAAATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000566354.1
CDS CCA 72 bp CCCACCAACAACGGAAGGTCTAGGATTTTTGTCTGTTaGTCACTCATATCTTCCCAGCACTTAGGACAGGGC +
Preference number: 6 (lower is better)
Translates to: PTNNGRSRIFVC*SLISSQHLGQG
Trigger: GCCCTGTCCTAAGTGCTGGGAAGATATGAGTGACCAACAGACAAAAATCCTAGACCTTCCGTTGTTGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS CAA 72 bp ATGGAATGGTATTCACGGAAGGGGAGGCACGAAGATTaGAGTGAAACGGACGCATTTCATGGGCCAGTGATG +
Preference number: 6 (lower is better)
Translates to: MEWYSRKGRHED*SETDAFHGPVM
Trigger: CATCACTGGCCCATGAAATGCGTCCGTTTCACTCAAATCTTCGTGCCTCCCCTTCCGTGAATACCATTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562754.1
CDS CAA 72 bp TTGCATGGGACTCTGGCAATCTGTAGCCCCAATGCCTaGATGTCTTCCTCATTAACACTGTCACGTCTCACC +
Preference number: 6 (lower is better)
Translates to: LHGTLAICSPNA*MSSSLTLSRLT
Trigger: GGTGAGACGTGACAGTGTTAATGAGGAAGACATCAAGGCATTGGGGCTACAGATTGCCAGAGTCCCATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS CAA 90 bp ACTCATGATTTGCATGGGACTCTGGCAATCTGTAGCCCCAATGCCTaGATGTCTTCCTCATTAACACTGTCACGTCTCACCAGGAATACA +
Preference number: 6 (lower is better)
Translates to: THDLHGTLAICSPNA*MSSSLTLSRLTRNT
Trigger: TGTATTCCTGGTGAGACGTGACAGTGTTAATGAGGAAGACATCAAGGCATTGGGGCTACAGATTGCCAGAGTCCCATGCAAATCATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS GCA 72 bp TTTCTTCATTTTCTCTTGCCACCAGCATGTAAGAAGTaGCTTTGGTCTCCTACCATGATTCTGAGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: FLHFLLPPACKK*LWSPTMILRPP
Trigger: GGGAGGCCTCAGAATCATGGTAGGAGACCAAAGGCACTTCTTACATGCTGGTGGCAAGAGAAAATGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564399.1
ENST00000566354.1
CDS CCA 72 bp GGTCATTTTATATCCAACACTTTCCAAACACTGATTTaGTGTCCACCCCGCACAAGAGCACACAGTGCTGAC +
Preference number: 6 (lower is better)
Translates to: GHFISNTFQTLI*CPPRTRAHSAD
Trigger: GTCAGCACTGTGTGCTCTTGTGCGGGGTGGACACCAAATCAGTGTTTGGAAAGTGTTGGATATAAAATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS TCA 72 bp TTCCTGGTCATTTTATATCCAACACTTTCCAAACACTaGTTTGGTGTCCACCCCGCACAAGAGCACACAGTG +
Preference number: 6 (lower is better)
Translates to: FLVILYPTLSKH*FGVHPAQEHTV
Trigger: CACTGTGTGCTCTTGTGCGGGGTGGACACCAAATCAGTGTTTGGAAAGTGTTGGATATAAAATGACCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566354.1
CDS TCA 72 bp GTGAAGCAGCTTTTAACTCTCTTGCCCAAAGTCCTCTaGGAATTTCTTCACTTTCAGGAGGTCGTCTGCATT +
Preference number: 6 (lower is better)
Translates to: VKQLLTLLPKVL*EFLHFQEVVCI
Trigger: AATGCAGACGACCTCCTGAAAGTGAAGAAATTCTCAGAGGACTTTGGGCAAGAGAGTTAAAAGCTGCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254950.13
ENST00000566354.1
CDS TCA 72 bp CGTGCTATTCTCGTGATGGTGAAGTCTCACGAGATCTaGTGGGTTTATCAGGGGTTTCCACTTTTGTTTCTT +
Preference number: 6 (lower is better)
Translates to: RAILVMVKSHEI*WVYQGFPLLFL
Trigger: AAGAAACAAAAGTGGAAACCCCTGATAAACCCATCAGATCTCGTGAGACTTCACCATCACGAGAATAGCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564399.1
ENST00000566354.1
CDS TCA 72 bp AGGAGGACCCACAGCAAATACTCAGCAGAGATCTGCTaGATGAATAGACAGGTCTTCCTGGTCATTTTATAT +
Preference number: 6 (lower is better)
Translates to: RRTHSKYSAEIC*MNRQVFLVILY
Trigger: ATATAAAATGACCAGGAAGACCTGTCTATTCATTCAGCAGATCTCTGCTGAGTATTTGCTGTGGGTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566354.1