RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS45 (Homo sapiens)

Ensembl gene IDs: ENSG00000136631

Ensembl transcript IDs: ENST00000369128.9, ENST00000419023.3, ENST00000460366.5, ENST00000462852.5, ENST00000472756.1, ENST00000477558.2, ENST00000478999.1, ENST00000491789.2, ENST00000497638.2, ENST00000535106.5, ENST00000611412.4, ENST00000618148.1, ENST00000642919.1, ENST00000643611.1, ENST00000643970.1, ENST00000644510.2, ENST00000644526.1, ENST00000644704.1, ENST00000647278.1

Found 696 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATaGGTTCTAACAACCAGCACAGAACCCAAAGCTGCTCTCCAACAC +
Preference number: 1 (lower is better)
Translates to: SLVSVPTTYPWATWR*VLTTSTEPKAALQH
Trigger: GTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR CCA 90 bp GAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTG +
Preference number: 1 (lower is better)
Translates to: EKWVEMGSDLLLGQL*ESCVCANHVSVGYL
Trigger: CAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR TCA 90 bp CTGCAGACACGAGCTTTCGATACTTCTCAGAAACACCTTTATTCCTaGGGTCCATCATTAGTCCTGGCAGGCTATTGCTGCTGTGTCGCT +
Preference number: 1 (lower is better)
Translates to: LQTRAFDTSQKHLYS*GPSLVLAGYCCCVA
Trigger: AGCGACACAGCAGCAATAGCCTGCCAGGACTAATGATGGACCTCAGGAATAAAGGTGTTTCTGAGAAGTATCGAAAGCTCGTGTCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR TCA 90 bp CCAGTTCTTGCTCAACCTCTGAAACCTCCAGCAGATTCCGTTCACTaGCCAATCGAGACAGTTCTCCAACCACTGTCACATGCTTTGAAA +
Preference number: 1 (lower is better)
Translates to: PVLAQPLKPPADSVH*PIETVLQPLSHALK
Trigger: TTTCAAAGCATGTGACAGTGGTTGGAGAACTGTCTCGATTGGTCAGTGAACGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR TCA 90 bp AGCACTAGAATGGTCATTTTGACAGGCCAGTTCTTGCTCAACCTCTaGAACCTCCAGCAGATTCCGTTCACTGACCAATCGAGACAGTTC +
Preference number: 1 (lower is better)
Translates to: STRMVILTGQFLLNL*NLQQIPFTDQSRQF
Trigger: GAACTGTCTCGATTGGTCAGTGAACGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR TCA 90 bp TTCCTGAACCTCAGCCACAACTTCCTGTTCATCAGCTTCAGCCAATaGCTTCACGTCACTCTTGCTGATCACATTACTGAAATAAATGAA +
Preference number: 1 (lower is better)
Translates to: FLNLSHNFLFISFSQ*LHVTLADHITEINE
Trigger: TTCATTTATTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGATGAACAGGAAGTTGTGGCTGAGGTTCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR TCA 90 bp CTCCAACCACTGTCACATGCTTTGAAACAGTCCCAGACATTTTCTTaGACTGTGGATAATTCTCAACAAACGCCTTCATGTCTGCTATTG +
Preference number: 1 (lower is better)
Translates to: LQPLSHALKQSQTFS*TVDNSQQTPSCLLL
Trigger: CAATAGCAGACATGAAGGCGTTTGTTGAGAATTATCCACAGTTCAAGAAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR TCA 90 bp TTCACTGACCAATCGAGACAGTTCTCCAACCACTGTCACATGCTTTaGAACAGTCCCAGACATTTTCTTGAACTGTGGATAATTCTCAAC +
Preference number: 1 (lower is better)
Translates to: FTDQSRQFSNHCHML*NSPRHFLELWIILN
Trigger: GTTGAGAATTATCCACAGTTCAAGAAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAGAACTGTCTCGATTGGTCAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR CCA 90 bp GGCTCAGAGATTAAGTCAACAGCTCCATGTCACAAAGCCTGTAAGTaGTATACCAAACACTCCAATCTAGATCTTCTGATTCTAGTTTGG +
Preference number: 1 (lower is better)
Translates to: GSEIKSTAPCHKACK*YTKHSNLDLLILVW
Trigger: CCAAACTAGAATCAGAAGATCTAGATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTGACATGGAGCTGTTGACTTAATCTCTGAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
3UTR TCA 90 bp ATTCATCATTTTCAGCAGATAGGACCACTTCTCTTAAGTCTTTACTaGTTCCCGGCACTCTGGAAAGATCAATCCGATTGTTGTTTATGC +
Preference number: 1 (lower is better)
Translates to: IHHFQQIGPLLLSLY*FPALWKDQSDCCLC
Trigger: GCATAAACAACAATCGGATTGATCTTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAGAAGTGGTCCTATCTGCTGAAAATGATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR GCA 90 bp AGCTCTCCTTGCTTCGGCTGTGCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACGGAGTCTTGTGTCTGTaGCAACCACGTATCCGTGGG +
Preference number: 2 (lower is better)
Translates to: SSPCFGCAVQKPELPLGNGVLCL*QPRIRG
Trigger: CCCACGGATACGTGGTTGGCACAGACACAAGACTCC...GTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR-3UTR CCA 90 bp AGCTCTCCTTGCTTCGGCTGTGCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTCGTGTTGTGCACTGTaGTGCCTCCCAGGACAATCC +
Preference number: 2 (lower is better)
Translates to: SSPCFGCAVQKPELPLGNSCCAL*CLPGQS
Trigger: GGATTGTCCTGGGAGGCACCACAGTGCACAACACGA...GTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR-3UTR CCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGAACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR-3UTR GCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCCAAGAGAGGAAGCTGTaGCCTTCCCCCAACCACCGT +
Preference number: 2 (lower is better)
Translates to: DLLLGQLWESCVCANHVSQERKL*PSPNHR
Trigger: ACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTG...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR-3UTR CCA 90 bp GGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAAACTTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: GASQDNPHSRSGAVQVINLLGQL*ESCVCA
Trigger: GGCACAGACACAAGACTCCCAGAGTTGTCCTAACAA...GTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR-3UTR TCA 90 bp TGCTGCTGTGTCGCTCATAATGTAAAGCATAAAGCATCACCAGGCGGGCAGCATTCGCTGACCTTGATGTaGCTTGAGAGCTCTCCTTGC +
Preference number: 2 (lower is better)
Translates to: CCCVAHNVKHKASPGGQHSLTLM*LESSPC
Trigger: GCAAGGAGAGCTCTCAAGTCACATCAAGGTCAGCGA...ATGCTGCCCGCCTGGTGATGCTTTATGCTTTACATTATGAGCGACACAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR TCA 90 bp CTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACAATCCGGTTTAGCAATGGGGTaGTGGCATCATCACAGCGAT +
Preference number: 2 (lower is better)
Translates to: LPLGNFSCCALWCLPGQSGLAMG*WHHHSD
Trigger: ATCGCTGTGATGATGCCATCACCCCATTGCTAAACC...GGATTGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR GCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCGGAGTCTTGTGTCTGTaGCAACCACGTATCCGTGGG +
Preference number: 2 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTGVLCL*QPRIRG
Trigger: CCCACGGATACGTGGTTGGCACAGACACAAGACTCC...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR-3UTR GCA 90 bp GCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGTTGTGCACTGTGGTaGCTCCCAGGACAATCCTCA +
Preference number: 2 (lower is better)
Translates to: AVQKPELPLGNFSCCALWCCALW*LPGQSS
Trigger: TGAGGATTGTCCTGGGAGGCACCACAGTGCACAACA...CCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR-3UTR GCA 90 bp CCTTGCTTCGGCTGTGCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGAAACTTTTCGTGTTGTaGACTGTGGTGCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: PCFGCAVQKPELPLGNFSKLFVL*TVVPPR
Trigger: CCTGGGAGGCACCACAGTGCACAACACGAAAAGTTT...CGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR-3UTR GCA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGGAGTCTTGTGTCTGTaGCAACCACGTATCCGTGGG +
Preference number: 2 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCGVLCL*QPRIRG
Trigger: CCCACGGATACGTGGTTGGCACAGACACAAGACTCC...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR GCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGGGAGTCTTGTGTCTGTaGCAACCACGTATCCGTGGG +
Preference number: 2 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQGVLCL*QPRIRG
Trigger: CCCACGGATACGTGGTTGGCACAGACACAAGACTCC...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR CCA 90 bp AACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAACCTTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: NHVSVGYLEMSSNNQHRTLLGQL*ESCVCA
Trigger: GGCACAGACACAAGACTCCCAGAGTTGTCCTAACAA...GGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR-3UTR TCA 90 bp CCTTGCTTCGGCTGTGCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGAACACAATGATATCCTaGGGTCTGTCTCTGAGTGTG +
Preference number: 2 (lower is better)
Translates to: PCFGCAVQKPELPLGNFSNTMIS*GLSLSV
Trigger: CACACTCAGAGACAGACCTCAGGATATCATTGTGTT...CGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR GCA 90 bp TGCTGCTGTGTCGCTCATAATGTAAAGCATAAAGCATCACCAGGCGGGCAGCATTCACTCCAGGAGTGGTaGGGTTCAGGTTATAAACTG +
Preference number: 2 (lower is better)
Translates to: CCCVAHNVKHKASPGGQHSLQEW*GSGYKL
Trigger: CAGTTTATAACCTGAACCGCACCACTCCTGGAGTGA...ATGCTGCCCGCCTGGTGATGCTTTATGCTTTACATTATGAGCGACACAGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR TCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGCGGAGAAAAGTGGGTTaGGATGGGCTCAGACTTATT +
Preference number: 2 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWRRKVG*DGLRLI
Trigger: AATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCG...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR TCA 90 bp TGTGGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAATGGTACAGTTCTTATaGGCATTTACTGCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: CGASQDNPHSRSGAVQVIMVQFL*AFTAGK
Trigger: TTTTCCTGCAGTAAATGCTCATAAGAACTGTACCAT...TATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491789.2
3UTR-3UTR GCA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGGGAGTCTTGTGTCTGTaGCAACCACGTATCCGTGGG +
Preference number: 2 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLGVLCL*QPRIRG
Trigger: CCCACGGATACGTGGTTGGCACAGACACAAGACTCC...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR CAA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATaGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTA +
Preference number: 2 (lower is better)
Translates to: IKTTGEKWVEMGSDL*LGQLWESCVCANHV
Trigger: TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR GCA 90 bp CCTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGCAAGAGAGGAAGCTGTaGCCTTCCCCCAACCACCGT +
Preference number: 2 (lower is better)
Translates to: PFTKWIFIVVIHGFSVPQQERKL*PSPNHR
Trigger: ACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTG...CTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000611412.4
ENST00000644510.2
3UTR-3UTR GCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTCACAGAACCCAAAGCTaGTCTCCAACACCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRHRTQS*SPTPLF
Trigger: AAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTG...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR-3UTR GCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCCACAGAACCCAAAGCTaGTCTCCAACACCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: DLLLGQLWESCVCANHVSHRTQS*SPTPLF
Trigger: AAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTG...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR-3UTR CCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQLLGQL*ESCVCA
Trigger: GGCACAGACACAAGACTCCCAGAGTTGTCCTAACAA...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR CCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR-3UTR TCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTCGGAGAAAAGTGGGTTaGGATGGGCTCAGACTTATT +
Preference number: 2 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSRRKVG*DGLRLI
Trigger: AATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCG...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR-3UTR TCA 90 bp CTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACAATCCGGTATGTACATCAAATaGTTACTTTTTAAGCCCCTC +
Preference number: 2 (lower is better)
Translates to: LPLGNFSCCALWCLPGQSGMYIK*LLFKPL
Trigger: GAGGGGCTTAAAAAGTAATCATTTGATGTACATACC...GGATTGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR-3UTR TCA 90 bp GCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGCAATTACAAACACAATaGTATCCTGAGGTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: AVQKPELPLGNFSCCALWQLQTQ*YPEVCL
Trigger: GAGACAGACCTCAGGATATCATTGTGTTTGTAATTG...CCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR CCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAATTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQLLGQL*ESCVCA
Trigger: GGCACAGACACAAGACTCCCAGAGTTGTCCTAACAA...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR CCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGAACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR TCA 90 bp AGTTCTCCAACCACTGTCACATGCTTTGAAACAGTCCCAGACATTTTCTTGAACCGGAGAAAAGTGGGTTaGGATGGGCTCAGACTTATT +
Preference number: 2 (lower is better)
Translates to: SSPTTVTCFETVPDIFLNRRKVG*DGLRLI
Trigger: AATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCG...GTTCAAGAAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR TCA 90 bp AGTTCTCCAACCACTGTCACATGCTTTGAAACAGTCCCAGACATTTTCTTGAACAGAGCTGTAAGCCCTTaGGTTGTTCTAGATAGCTGG +
Preference number: 2 (lower is better)
Translates to: SSPTTVTCFETVPDIFLNRAVSP*VVLDSW
Trigger: CCAGCTATCTAGAACAACTCAAGGGCTTACAGCTCT...GTTCAAGAAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR CCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR CCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGAAGCCAAGGAGTGTaGTATGTACATCAAATGATT +
Preference number: 2 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRGSQGV*YVHQMI
Trigger: AATCATTTGATGTACATACCACACTCCTTGGCTTCC...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR CCA 90 bp TTTTCAGCAGATAGGACCACTTCTCTTAAGTCTTTACTGATTCCCGGCACTCTGGAGCCTCTTCATAGGTaGCTCCTCCAATTACAAACA +
Preference number: 2 (lower is better)
Translates to: FSADRTTSLKSLLIPGTLEPLHR*LLQLQT
Trigger: TGTTTGTAATTGGAGGAGCCACCTATGAAGAGGCTC...CAGAGTGCCGGGAATCAGTAAAGACTTAAGAGAAGTGGTCCTATCTGCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR TCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACCGGAGAAAAGTGGGTTaGGATGGGCTCAGACTTATT +
Preference number: 2 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYRRKVG*DGLRLI
Trigger: AATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCG...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR GCA 90 bp CAAACACTCCAATCTAGATCTTCTGATTCTAGTTTGGTGCTCTTTCTAGTAGACTGCCTTTTTATCTCTTaGTCTGCCTGGCACAGTGCC +
Preference number: 2 (lower is better)
Translates to: QTLQSRSSDSSLVLFLVDCLFIS*SAWHSA
Trigger: GGCACTGTGCCAGGCAGAGCAAGAGATAAAAAGGCA...GTCTACTAGAAAGAGCACCAAACTAGAATCAGAAGATCTAGATTGGAGTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644704.1
3UTR-3UTR CCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR CCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCAGTTGTGCAGGAATGTaGTTAATGAAAAGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: DLLLGQLWESCVCANHVSSCAGM*LMKSRK
Trigger: CTTTCTGCTTTTCATTAACCACATTCCTGCACAACT...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR CCA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR TCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTACTTCCTTTTTGAATTaGCTGATTCTGGAATGCATG +
Preference number: 2 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSTSFLN*LILECM
Trigger: CATGCATTCCAGAATCAGTCAATTCAAAAAGGAAGT...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491789.2
3UTR-3UTR TCA 90 bp CTGATGAGAGCTGATAACGAATCATGGGACACTTCTTCAGAGATAAAAGGAGAGCCTTCAGGTGTTTCATaGTCTCTCGATTTTGAGAAT +
Preference number: 2 (lower is better)
Translates to: LMRADNESWDTSSEIKGEPSGVS*SLDFEN
Trigger: ATTCTCAAAATCGAGAGATCATGAAACACCTGAAGG...CTCTCCTTTTATCTCTGAAGAAGTGTCCCATGATTCGTTATCAGCTCTCATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR TCA 90 bp CCTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGGTAGGTTTTCAGAAATaGGTTGTGCAGGAATGTGGT +
Preference number: 2 (lower is better)
Translates to: PFTKWIFIVVIHGFSVPQVGFQK*VVQECG
Trigger: ACCACATTCCTGCACAACTCATTTCTGAAAACCTAC...CTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR CCA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAATTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCC +
Preference number: 2 (lower is better)
Translates to: FHKMDFYCGHTWFLSATELLGQL*ESCVCA
Trigger: GGCACAGACACAAGACTCCCAGAGTTGTCCTAACAA...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR TCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGATGATCTCTCGATTTTaGGAATCAATGCGTTCAAAG +
Preference number: 2 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMMISRF*ESMRSK
Trigger: CTTTGAACGCATTGATTCTCAAAATCGAGAGATCAT...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR TCA 90 bp CAAATAATGAAACTGGCTCAGAGATTAAGTCAACAGCTCCATGTCACAAAGCCTCTTATACTAATTAACTaGACCCTTGGGAATTGCACA +
Preference number: 2 (lower is better)
Translates to: QIMKLAQRLSQQLHVTKPLILIN*TLGNCT
Trigger: TGTGCAATTCCCAAGGGTTCAGTTAATTAGTATAAG...AGGCTTTGTGACATGGAGCTGTTGACTTAATCTCTGAGCCAGTTTCATTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
3UTR-3UTR GCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGAGATTTTGAGAATCAATaGGTTCAAAGAGGTACACTT +
Preference number: 2 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGDFENQ*VQRGTL
Trigger: AAGTGTACCTCTTTGAACGCATTGATTCTCAAAATC...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR CCA 90 bp CAAACACTCCAATCTAGATCTTCTGATTCTAGTTTGGTGCTCTTTCTAGTAGACATGTCAGCTCCTTGTTaGACTAAATTCCATGTTGAT +
Preference number: 2 (lower is better)
Translates to: QTLQSRSSDSSLVLFLVDMSAPC*TKFHVD
Trigger: ATCAACATGGAATTTAGTCCAACAAGGAGCTGACAT...GTCTACTAGAAAGAGCACCAAACTAGAATCAGAAGATCTAGATTGGAGTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
3UTR GCA 72 bp CTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTaGCTCCCAGGACAATCCTCACTCCAGGAGTGGTGC +
Preference number: 3 (lower is better)
Translates to: LPLGNFSCCALW*LPGQSSLQEWC
Trigger: GCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR TCA 72 bp AACCACCGTTTCATCTTCTGCTCGCTGACCTTGATGTaGCTTGAGAGCTCTCCTTGCTTCGGCTGTGCAGTC +
Preference number: 3 (lower is better)
Translates to: NHRFIFCSLTLM*LESSPCFGCAV
Trigger: GACTGCACAGCCGAAGCAAGGAGAGCTCTCAAGTCACATCAAGGTCAGCGAGCAGAAGATGAAACGGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR TCA 72 bp TCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATaGGTTCTAACAACCAGCACAGAACCCAAAGCTGCT +
Preference number: 3 (lower is better)
Translates to: SVPTTYPWATWR*VLTTSTEPKAA
Trigger: AGCAGCTTTGGGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR CCA 72 bp CTGTGGTGCCTCCCAGGACAATCCTCACTCCAGGAGTaGTGCGGTTCAGGTTATAAACTGTTAGAGCCTCTT +
Preference number: 3 (lower is better)
Translates to: LWCLPGQSSLQE*CGSGYKLLEPL
Trigger: AAGAGGCTCTAACAGTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR CCA 72 bp GAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTaGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGG +
Preference number: 3 (lower is better)
Translates to: ELPLGNFSCCAL*CLPGQSSLQEW
Trigger: CCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR-3UTR CAA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATGCTCTCCAACACCTTaGTTTAGTAGGGAAAACCTG +
Preference number: 3 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRCSPTP*FSRENL
Trigger: CAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCA...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR GCA 72 bp TGGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGGTaGGGTTCAGGTTATAAACTGTTAGAGCCTCTTCAT +
Preference number: 3 (lower is better)
Translates to: WCLPGQSSLQEW*GSGYKLLEPLH
Trigger: ATGAAGAGGCTCTAACAGTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR GCA 72 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTaGCAACCACGTATCCGTGGGCTACCTGGAGATGAG +
Preference number: 3 (lower is better)
Translates to: LIVRTTLGVLCL*QPRIRGLPGDE
Trigger: CTCATCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR TCA 72 bp GCTCAACCTCTGAAACCTCCAGCAGATTCCGTTCACTaGCCAATCGAGACAGTTCTCCAACCACTGTCACAT +
Preference number: 3 (lower is better)
Translates to: AQPLKPPADSVH*PIETVLQPLSH
Trigger: ATGTGACAGTGGTTGGAGAACTGTCTCGATTGGTCAGTGAACGGAATCTGCTGGAGGTTTCAGAGGTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR CCA 72 bp GCATCACCAGGCGGGCAGCATCAAACTCTGTCACTTTaGGGTTCTGCAGAAGCCTTTTTATATTCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: ASPGGQHQTLSL*GSAEAFLYSGE
Trigger: CTCTCCAGAATATAAAAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGATGCTGCCCGCCTGGTGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR CAA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTCCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 3 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR TCA 72 bp ATGGTCATTTTGACAGGCCAGTTCTTGCTCAACCTCTaGAACCTCCAGCAGATTCCGTTCACTGACCAATCG +
Preference number: 3 (lower is better)
Translates to: MVILTGQFLLNL*NLQQIPFTDQS
Trigger: CGATTGGTCAGTGAACGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAACTGGCCTGTCAAAATGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR GCA 72 bp CCGGCACTCTGGAAAGATCAATCCGATTGTTGTTTATaGCTAGTAGTTCGTGGACCATGGCCTGATATGTCC +
Preference number: 3 (lower is better)
Translates to: PALWKDQSDCCL*LVVRGPWPDMS
Trigger: GGACATATCAGGCCATGGTCCACGAACTACTAGGCATAAACAACAATCGGATTGATCTTTCCAGAGTGCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR CAA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTAGGAAACTTTTCGTGTaGTGCACTGTGGTGCCTCCC +
Preference number: 3 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSRKLFV*CTVVPP
Trigger: GGGAGGCACCACAGTGCACAACACGAAAAGTTTCCT...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
3UTR GCA 72 bp AGGCGGGCAGCATCAAACTCTGTCACTTTGGGGTTCTaGAGAAGCCTTTTTATATTCTGGAGAGCACTAGAA +
Preference number: 3 (lower is better)
Translates to: RRAASNSVTLGF*RSLFIFWRALE
Trigger: TTCTAGTGCTCTCCAGAATATAAAAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGATGCTGCCCGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR CAA 90 bp ATGAAACTGGCTCAGAGATTAAGTCAACAGCTCCATGTCACAAAGCCTGTAAGTTTGCCTTTTTATCTCTaGCTCTGCCTGGCACAGTGC +
Preference number: 3 (lower is better)
Translates to: MKLAQRLSQQLHVTKPVSLPFYL*LCLAQC
Trigger: GCACTGTGCCAGGCAGAGCAAGAGATAAAAAGGCAA...ACTTACAGGCTTTGTGACATGGAGCTGTTGACTTAATCTCTGAGCCAGTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644704.1
3UTR GCA 72 bp GAGATGAGTTCTAACAACCAGCACAGAACCCAAAGCTaGTCTCCAACACCTTTGTTTAGTAGGGAAAACCTG +
Preference number: 3 (lower is better)
Translates to: EMSSNNQHRTQS*SPTPLFSRENL
Trigger: CAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTTGTTAGAACTCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR-3UTR CAA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACCCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 3 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR CAA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGCCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 3 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR CAA 90 bp CTGACCAATCGAGACAGTTCTCCAACCACTGTCACATGCTTTGAAACAGTCCCAAGATCAATCCGATTGTaGTTTATGCCTAGTAGTTCG +
Preference number: 3 (lower is better)
Translates to: LTNRDSSPTTVTCFETVPRSIRL*FMPSSS
Trigger: CGAACTACTAGGCATAAACAACAATCGGATTGATCT...TGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAGAACTGTCTCGATTGGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR GCA 72 bp CTGACCAATCGAGACAGTTCTCCAACCACTGTCACATaGTTTGAAACAGTCCCAGACATTTTCTTGAACTGT +
Preference number: 3 (lower is better)
Translates to: LTNRDSSPTTVT*FETVPDIFLNC
Trigger: ACAGTTCAAGAAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAGAACTGTCTCGATTGGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR GCA 72 bp ACTTCCTCTGACTCGTTTACCACCATATTCAACAACTaGAGACACGAGCTTTCGATACTTCTCAGAAACACC +
Preference number: 3 (lower is better)
Translates to: TSSDSFTTIFNN*RHELSILLRNT
Trigger: GGTGTTTCTGAGAAGTATCGAAAGCTCGTGTCTGCAGTTGTTGAATATGGTGGTAAACGAGTCAGAGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR-3UTR CAA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTCCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 3 (lower is better)
Translates to: LREEKGSQGVWYVHQMITPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
3UTR-3UTR CAA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTACCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 3 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR TCA 72 bp TTTCAGCAGATAGGACCACTTCTCTTAAGTCTTTACTaGTTCCCGGCACTCTGGAAAGATCAATCCGATTGT +
Preference number: 3 (lower is better)
Translates to: FQQIGPLLLSLY*FPALWKDQSDC
Trigger: ACAATCGGATTGATCTTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAGAAGTGGTCCTATCTGCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR TCA 72 bp CAATCGAGACAGTTCTCCAACCACTGTCACATGCTTTaGAACAGTCCCAGACATTTTCTTGAACTGTGGATA +
Preference number: 3 (lower is better)
Translates to: QSRQFSNHCHML*NSPRHFLELWI
Trigger: TATCCACAGTTCAAGAAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAGAACTGTCTCGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR TCA 72 bp CTTTTTATATTCTGGAGAGCACTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCAACCTCTGAAACCTCC +
Preference number: 3 (lower is better)
Translates to: LFIFWRALEWSF*QASSCSTSETS
Trigger: GGAGGTTTCAGAGGTTGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGTGCTCTCCAGAATATAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR CCA 72 bp TGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGACTTATTGTTAGGACAA +
Preference number: 3 (lower is better)
Translates to: CANRYIKTTGEK*VEMGSDLLLGQ
Trigger: TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR TCA 72 bp CAAATTGCCTTCAGGTGTTTCATGATCTCTCGATTTTaGGAATCAATGCGTTCAAAGAGGTACACTTCCTTC +
Preference number: 3 (lower is better)
Translates to: QIAFRCFMISRF*ESMRSKRYTSF
Trigger: GAAGGAAGTGTACCTCTTTGAACGCATTGATTCTCAAAATCGAGAGATCATGAAACACCTGAAGGCAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR TCA 72 bp CTGTCACATGCTTTGAAACAGTCCCAGACATTTTCTTaGACTGTGGATAATTCTCAACAAACGCCTTCATGT +
Preference number: 3 (lower is better)
Translates to: LSHALKQSQTFS*TVDNSQQTPSC
Trigger: ACATGAAGGCGTTTGTTGAGAATTATCCACAGTTCAAGAAAATGTCTGGGACTGTTTCAAAGCATGTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
3UTR TCA 72 bp TCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTaGAGTGATTGTGCTAACAGATACATAAAGACTACC +
Preference number: 3 (lower is better)
Translates to: SPSQIPTKFISN*SDCANRYIKTT
Trigger: GGTAGTCTTTATGTATCTGTTAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
3UTR CCA 72 bp ATTAAGTCAACAGCTCCATGTCACAAAGCCTGTAAGTaGTATACCAAACACTCCAATCTAGATCTTCTGATT +
Preference number: 3 (lower is better)
Translates to: IKSTAPCHKACK*YTKHSNLDLLI
Trigger: AATCAGAAGATCTAGATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTGACATGGAGCTGTTGACTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
3UTR-3UTR CAA 90 bp CACAAAGCCTGTAAGTGGTATACCAAACACTCCAATCTAGATCTTCTGATTCTAATGAAGAAGGATTACTaGCCTTTTTATCTCTTGCTC +
Preference number: 3 (lower is better)
Translates to: HKACKWYTKHSNLDLLILMKKDY*PFYLLL
Trigger: GAGCAAGAGATAAAAAGGCAAGTAATCCTTCTTCAT...TAGAATCAGAAGATCTAGATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR TCA 90 bp GAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTTGCCAGTCTGCGGCCTaGAGATGCCTGAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: ESCVCANHVSVGYLEMSSCQSAA*RCLRPG
Trigger: TCCGGGCCTCAGGCATCTTCAGGCCGCAGACTGGCA...AGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643970.1
CDS-3UTR GCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGACGGCCTGGGCCGCTaGCACGCGCGGGCGTTATTC +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRDGLGR*HARALF
Trigger: GAATAACGCCCGCGCGTGGCAGCGGCCCAGGCCGTC...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS-3UTR TCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGCCCAGCGGCAGCCTaGAGCCCAAGAGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRGPAAA*SPREWS
Trigger: GCTCCACTCTCTTGGGCTTCAGGCTGCCGCTGGGCC...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR GCA 90 bp GGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAAACCAAGAGAGGAAGCTGTaGCCTTCCCCCAACCACCGT +
Preference number: 4 (lower is better)
Translates to: GASQDNPHSRSGAVQVINQERKL*PSPNHR
Trigger: ACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTG...GTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR GCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGACAAGAGAGGAAGCTGTaGCCTTCCCCCAACCACCGT +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRQERKL*PSPNHR
Trigger: ACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTG...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCGGCCTGAAGATGCCTaGGGCCCGGACTCTCAGACC +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANRPEDA*GPDSQT
Trigger: GGTCTGAGAGTCCGGGCCTCAGGCATCTTCAGGCCG...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATCGTGTTGTGCACTGTaGTGCCTCCCAGGACAATCC +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRSCCAL*CLPGQS
Trigger: GGATTGTCCTGGGAGGCACCACAGTGCACAACACGA...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGGCGGGTGGATCGCTTaGGCCCAGGAGTTCGAAACC +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWGGWIA*AQEFET
Trigger: GGTTTCGAACTCCTGGGCTCAAGCGATCCACCCGCC...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000644526.1
CDS-3UTR TCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTGGCGGGTGGATCGCTTaGGCCCAGGAGTTCGAAACC +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRGGWIA*AQEFET
Trigger: GGTTTCGAACTCCTGGGCTCAAGCGATCCACCCGCC...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000644526.1
CDS-3UTR GCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATGTTGTGCACTGTGGTaGCTCCCAGGACAATCCTCA +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRCCALW*LPGQSS
Trigger: TGAGGATTGTCCTGGGAGGCACCACAGTGCACAACA...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAGGAGTCTTGTGTCTGTaGCAACCACGTATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRGVLCL*QPRIRG
Trigger: CCCACGGATACGTGGTTGGCACAGACACAAGACTCC...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAAGGAACGACGGAGTGTaGCTACGTGCCCTATTTGCC +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRRNDGV*LRALFA
Trigger: GGCAAATAGGGCACGTAGCCACACTCCGTCGTTCCT...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643970.1
CDS-3UTR CCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGATTGCCCTTTGGTGCTaGAGGCCCAGCGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWIALWC*RPSGSL
Trigger: CAGGCTGCCGCTGGGCCTCCAGCACCAAAGGGCAAT...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACACCCCTATTGCCCTTTaGTGCTGGAGGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANTPIAL*CWRPSG
Trigger: GCCGCTGGGCCTCCAGCACCAAAGGGCAATAGGGGT...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTACCCCTATTGCCCTTTaGTGCTGGAGGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRTPIAL*CWRPSG
Trigger: GCCGCTGGGCCTCCAGCACCAAAGGGCAATAGGGGT...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCATGCTCCCGGCCGCTTaGGACTCGGAGAGACGGCAT +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTMLPAA*DSERRH
Trigger: ATGCCGTCTCTCCGAGTCCCAAGCGGCCGGGAGCAT...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643970.1
CDS-3UTR TCA 90 bp GAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTTTTCTTGCATGGCAGTaGGAGATGAGGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: ESCVCANHVSVGYLEMSSFLAWQ*EMRARE
Trigger: CTCCCTTGCCCTCATCTCTCACTGCCATGCAAGAAA...AGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643970.1
CDS-3UTR TCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGAGCAGATTCCGTTCACTaGCCAATCGAGACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRADSVH*PIETVL
Trigger: GAGAACTGTCTCGATTGGTCAGTGAACGGAATCTGC...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGATGGAAAAATCCGGCTaGGACGGCCTGGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQMEKSG*DGLGRC
Trigger: GCAGCGGCCCAGGCCGTCTCAGCCGGATTTTTCCAT...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS-3UTR GCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGATGTTGTGCACTGTGGTaGCTCCCAGGACAATCCTCA +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRCCALW*LPGQSS
Trigger: TGAGGATTGTCCTGGGAGGCACCACAGTGCACAACA...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACTCCTTGCTTCGGCTGTaGAGTCCAGAAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LGQLWESCVCANHVSVGYSLLRL*SPEART
Trigger: AGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGA...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp AACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAACCCTTGAGAGCTCTCCTTaGTTCGGCTGTGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: NHVSVGYLEMSSNNQHRTLESSP*FGCAVQ
Trigger: CTGGACTGCACAGCCGAAGCAAGGAGAGCTCTCAAG...GGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAATTGCCCTTTGGTGCTaGAGGCCCAGCGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVIALWC*RPSGSL
Trigger: CAGGCTGCCGCTGGGCCTCCAGCACCAAAGGGCAAT...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR TCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACGGCCCAGCGGCAGCCTaGAGCCCAAGAGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYGPAAA*SPREWS
Trigger: GCTCCACTCTCTTGGGCTTCAGGCTGCCGCTGGGCC...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369128.9
ENST00000535106.5
CDS-3UTR TCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTACGGCCTGAAGATGCCTaGGGCCCGGACTCTCAGACC +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLRPEDA*GPDSQT
Trigger: GGTCTGAGAGTCCGGGCCTCAGGCATCTTCAGGCCG...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR TCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAGGTTTAGCAATGGGGTaGTGGCATCATCACAGCGAT +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRGLAMG*WHHHSD
Trigger: ATCGCTGTGATGATGCCATCACCCCATTGCTAAACC...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGACTGGCAGGCTATTGCTaGTGTGTCGCTCATAATGTA +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRLAGYC*CVAHNV
Trigger: TACATTATGAGCGACACAGCAGCAATAGCCTGCCAG...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTCAAGAGAGGAAGCTGTaGCCTTCCCCCAACCACCGT +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRQERKL*PSPNHR
Trigger: ACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTG...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAGTAGTTCGTGGACCATaGCCTGATATGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRVVRGP*PDMSTG
Trigger: ACCAGTGGACATATCAGGCCATGGTCCACGAACTAC...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp GAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTGTAGTTCGTGGACCATaGCCTGATATGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: ESCVCANHVSVGYLEMSSVVRGP*PDMSTG
Trigger: ACCAGTGGACATATCAGGCCATGGTCCACGAACTAC...AGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCATGCTCCCGGCCGCTTaGGACTCGGAGAGACGGCAT +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGMLPAA*DSERRH
Trigger: ATGCCGTCTCTCCGAGTCCCAAGCGGCCGGGAGCAT...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGAGTATTTGCGAAACAGTaGTCGAGATTCGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRVFAKQ*SRFVFP
Trigger: CGGGAAGACGAATCTCGACCACTGTTTCGCAAATAC...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643970.1
CDS-3UTR TCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTTGGAGCCTCGCGAAATaGGGAACCTGGCACAAGGTT +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRWSLAK*GTWHKV
Trigger: AACCTTGTGCCAGGTTCCTCATTTCGCGAGGCTCCA...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR TCA 90 bp GGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAAACCTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: GASQDNPHSRSGAVQVINLEWSF*QASSCS
Trigger: TGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAG...GTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR TCA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCGGAGAAAAGTGGGTTaGGATGGGCTCAGACTTATT +
Preference number: 4 (lower is better)
Translates to: LGQLWESCVCANHVSVGYRRKVG*DGLRLI
Trigger: AATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCG...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACAGAGCTGTAAGCCCTTaGGTTGTTCTAGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGQLWESCVCANHVSVGYRAVSP*VVLDSW
Trigger: CCAGCTATCTAGAACAACTCAAGGGCTTACAGCTCT...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGCAGGCTATTGCTaGTGTGTCGCTCATAATGTA +
Preference number: 4 (lower is better)
Translates to: LGQLWESCVCANHVSVGYLAGYC*CVAHNV
Trigger: TACATTATGAGCGACACAGCAGCAATAGCCTGCCAG...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTCTTGAGAGCTCTCCTTaGTTCGGCTGTGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRLESSP*FGCAVQ
Trigger: CTGGACTGCACAGCCGAAGCAAGGAGAGCTCTCAAG...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGACACAGAACCCAAAGCTaGTCTCCAACACCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRHRTQS*SPTPLF
Trigger: AAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTG...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACGGAGTCTTGTGTCTGTaGCAACCACGTATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANGVLCL*QPRIRG
Trigger: CCCACGGATACGTGGTTGGCACAGACACAAGACTCC...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAACCAAACTTTTCGTGTTGTaGACTGTGGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NHVSVGYLEMSSNNQHRTKLFVL*TVVPPR
Trigger: CCTGGGAGGCACCACAGTGCACAACACGAAAAGTTT...GGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTAGGAACGACGGAGTGTaGCTACGTGCCCTATTTGCC +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRRNDGV*LRALFA
Trigger: GGCAAATAGGGCACGTAGCCACACTCCGTCGTTCCT...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGATCCTCACTCCAGGAGTaGTGCGGTTCAGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRSSLQE*CGSGYK
Trigger: TTTATAACCTGAACCGCACCACTCCTGGAGTGAGGA...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGTCGTGTTGTGCACTGTaGTGCCTCCCAGGACAATCC +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWSCCAL*CLPGQS
Trigger: GGATTGTCCTGGGAGGCACCACAGTGCACAACACGA...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCTCGTGTTGTGCACTGTaGTGCCTCCCAGGACAATCC +
Preference number: 4 (lower is better)
Translates to: DLLLGQLWESCVCANHVSSCCAL*CLPGQS
Trigger: GGATTGTCCTGGGAGGCACCACAGTGCACAACACGA...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGACAAAAACCACGTTCATaGCGGCGAATTGACAAGTAC +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRQKPRS*RRIDKY
Trigger: GTACTTGTCAATTCGCCGCCATGAACGTGGTTTTTG...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCTTTCTTGCATGGCAGTaGGAGATGAGGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: DLLLGQLWESCVCANHVSFLAWQ*EMRARE
Trigger: CTCCCTTGCCCTCATCTCTCACTGCCATGCAAGAAA...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR TCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTACGGCCTGAAGATGCCTaGGGCCCGGACTCTCAGACC +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLRPEDA*GPDSQT
Trigger: GGTCTGAGAGTCCGGGCCTCAGGCATCTTCAGGCCG...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR TCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTATGCCAGTCTGCGGCCTaGAGATGCCTGAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLCQSAA*RCLRPG
Trigger: TCCGGGCCTCAGGCATCTTCAGGCCGCAGACTGGCA...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369128.9
ENST00000643970.1
CDS-3UTR TCA 90 bp GGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAAACTGTTAGAGCCTGGTTTAGCAATGGGGTaGTGGCATCATCACAGCGAT +
Preference number: 4 (lower is better)
Translates to: GQSSLQEWCGSGYKLLEPGLAMG*WHHHSD
Trigger: ATCGCTGTGATGATGCCATCACCCCATTGCTAAACC...AGGCTCTAACAGTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR TCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGTCGTGGACCATGGCCTaGTATGTCCACTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWSWTMA*YVHWFS
Trigger: GCTAAACCAGTGGACATATCAGGCCATGGTCCACGA...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACTCGTGGACCATGGCCTaGTATGTCCACTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANSWTMA*YVHWFS
Trigger: GCTAAACCAGTGGACATATCAGGCCATGGTCCACGA...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGACTCTTAAGTCTTTACTaGTTCCCGGCACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRLLSLY*FPALWK
Trigger: TTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAG...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTCTTAAGTCTTTACTaGTTCCCGGCACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LGQLWESCVCANHVSVGYLLSLY*FPALWK
Trigger: TTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAG...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGACTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRLEWSF*QASSCS
Trigger: TGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAG...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGAAAACACCTTTATTCCTaGGGTCCATCATTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRKHLYS*GPSLVL
Trigger: CAGGACTAATGATGGACCTCAGGAATAAAGGTGTTT...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTCTTCCTTTGATGAGATaGTCCAGGGTTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: ESCVCANHVSVGYLEMSSLPLMR*SRVSCR
Trigger: CCTACATGAAACCCTGGATCATCTCATCAAAGGAAG...AGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAAACACAATGATATCCTaGGGTCTGTCTCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRNTMIS*GLSLSV
Trigger: CACACTCAGAGACAGACCTCAGGATATCATTGTGTT...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACACAATGATATCCTaGGGTCTGTCTCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: ESCVCANHVSVGYLEMSSNTMIS*GLSLSV
Trigger: CACACTCAGAGACAGACCTCAGGATATCATTGTGTT...AGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTTCGCTGACCTTGATGTaGCTTGAGAGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRSLTLM*LESSPC
Trigger: GCAAGGAGAGCTCTCAAGTCACATCAAGGTCAGCGA...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTTCGCTGACCTTGATGTaGCTTGAGAGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRSLTLM*LESSPC
Trigger: GCAAGGAGAGCTCTCAAGTCACATCAAGGTCAGCGA...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACATGGGCTACCTGGAGATaGGTTCTAACAACCAGCACA +
Preference number: 4 (lower is better)
Translates to: RTSSRKLFVLCTVVPPRTWATWR*VLTTST
Trigger: TGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCA...TGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR TCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGTTCATGGCGGCGAATTaGCAAGTACCCTACAGCCCT +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWFMAAN*QVPYSP
Trigger: AGGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAA...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGAGGCAATTCTGTCTCTaGGTGTGCTGGGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: AVQKPELPLGNFSCCALWRQFCL*VCWGLN
Trigger: ATTTAGGCCCCAGCACACTCAGAGACAGAATTGCCT...CCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491789.2
CDS-3UTR GCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGCCTATTGCCCTTTGGTaGTGGAGGCCCAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMPIALW*WRPSGS
Trigger: GCTGCCGCTGGGCCTCCAGCACCAAAGGGCAATAGG...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR GCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTCAGACCCCTATTaGCCTTTGGTGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQLSDPY*PLVLEA
Trigger: GGCCTCCAGCACCAAAGGGCAATAGGGGTCTGAGAG...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR GCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATCCGATTGTTGTTTATaGCTAGTAGTTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRSDCCL*LVVRGP
Trigger: TGGTCCACGAACTACTAGGCATAAACAACAATCGGA...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp GGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAAACTGTTAGAGCCTGTCCTGGCAGGCTATTaGTGCTGTGTCGCTCATAAT +
Preference number: 4 (lower is better)
Translates to: GQSSLQEWCGSGYKLLEPVLAGY*CCVAHN
Trigger: ATTATGAGCGACACAGCAGCAATAGCCTGCCAGGAC...AGGCTCTAACAGTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR GCA 90 bp AACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAACCTCACTCCAGGAGTGGTaGGGTTCAGGTTATAAACTG +
Preference number: 4 (lower is better)
Translates to: NHVSVGYLEMSSNNQHRTSLQEW*GSGYKL
Trigger: CAGTTTATAACCTGAACCGCACCACTCCTGGAGTGA...GGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp CCTTGCTTCGGCTGTGCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGTCACTCCAGGAGTGGTaGGGTTCAGGTTATAAACTG +
Preference number: 4 (lower is better)
Translates to: PCFGCAVQKPELPLGNFSSLQEW*GSGYKL
Trigger: CAGTTTATAACCTGAACCGCACCACTCCTGGAGTGA...CGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR GCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTTGTTGTGCACTGTGGTaGCTCCCAGGACAATCCTCA +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRCCALW*LPGQSS
Trigger: TGAGGATTGTCCTGGGAGGCACCACAGTGCACAACA...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTTGTGCACTGTGGTaGCTCCCAGGACAATCCTCA +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTCCALW*LPGQSS
Trigger: TGAGGATTGTCCTGGGAGGCACCACAGTGCACAACA...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTTGTTGTGCACTGTGGTaGCTCCCAGGACAATCCTCA +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRCCALW*LPGQSS
Trigger: TGAGGATTGTCCTGGGAGGCACCACAGTGCACAACA...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCTCCTTGCTTCGGCTGTaGAGTCCAGAAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: DLLLGQLWESCVCANHVSSLLRL*SPEART
Trigger: AGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGA...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTTGAGAGCTCTCCTTaGTTCGGCTGTGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: NQHRTQSCSPTPLFSRENLESSP*FGCAVQ
Trigger: CTGGACTGCACAGCCGAAGCAAGGAGAGCTCTCAAG...GTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGATTGCCCTTTGGTGCTaGAGGCCCAGCGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMIALWC*RPSGSL
Trigger: CAGGCTGCCGCTGGGCCTCCAGCACCAAAGGGCAAT...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACACCCCTATTGCCCTTTaGTGCTGGAGGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYTPIAL*CWRPSG
Trigger: GCCGCTGGGCCTCCAGCACCAAAGGGCAATAGGGGT...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369128.9
ENST00000535106.5
CDS-3UTR CCA 90 bp GCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGGTAGTTCGTGGACCATaGCCTGATATGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: AVQKPELPLGNFSCCALWVVRGP*PDMSTG
Trigger: ACCAGTGGACATATCAGGCCATGGTCCACGAACTAC...CCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTTCGTGTTGTGCACTGTaGTGCCTCCCAGGACAATCC +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCSCCAL*CLPGQS
Trigger: GGATTGTCCTGGGAGGCACCACAGTGCACAACACGA...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGATCCCAATTTCGACCCTaGCAGCAACCCAAAATATTG +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRSQFRP*QQPKIL
Trigger: CAATATTTTGGGTTGCTGCCAGGGTCGAAATTGGGA...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp AGCTCTCCTTGCTTCGGCTGTGCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACGTTGTTCTAGATAGCTaGGCTGGATCCCAATTTCGA +
Preference number: 4 (lower is better)
Translates to: SSPCFGCAVQKPELPLGNVVLDS*AGSQFR
Trigger: TCGAAATTGGGATCCAGCCCAGCTATCTAGAACAAC...GTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR TCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGACCTTCAGGTGTTTCATaGTCTCTCGATTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRPSGVS*SLDFEN
Trigger: ATTCTCAAAATCGAGAGATCATGAAACACCTGAAGG...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491789.2
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp AGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACAATCAGCTTCAGCCAATaGCTTCACGTCACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RTSSRKLFVLCTVVPPRTISFSQ*LHVTLA
Trigger: AGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGAT...TGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR TCA 90 bp CCTTGCTTCGGCTGTGCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGTTAGTTATCACTTGCTaGACCTCAGCCACAACTTCC +
Preference number: 4 (lower is better)
Translates to: PCFGCAVQKPELPLGNFSLVITC*TSATTS
Trigger: GGAAGTTGTGGCTGAGGTTCAGCAAGTGATAACTAA...CGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491789.2
CDS-3UTR TCA 90 bp CTGACCAATCGAGACAGTTCTCCAACCACTGTCACATGCTTTGAAACAGTCCCAGGTTTAGCAATGGGGTaGTGGCATCATCACAGCGAT +
Preference number: 4 (lower is better)
Translates to: LTNRDSSPTTVTCFETVPGLAMG*WHHHSD
Trigger: ATCGCTGTGATGATGCCATCACCCCATTGCTAAACC...TGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAGAACTGTCTCGATTGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR TCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGGTTTAGCAATGGGGTaGTGGCATCATCACAGCGAT +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWGLAMG*WHHHSD
Trigger: ATCGCTGTGATGATGCCATCACCCCATTGCTAAACC...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTTCGTGGACCATGGCCTaGTATGTCCACTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCSWTMA*YVHWFS
Trigger: GCTAAACCAGTGGACATATCAGGCCATGGTCCACGA...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTTCGTGGACCATGGCCTaGTATGTCCACTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCSWTMA*YVHWFS
Trigger: GCTAAACCAGTGGACATATCAGGCCATGGTCCACGA...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGCAGATTCCGTTCACTaGCCAATCGAGACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWADSVH*PIETVL
Trigger: GAGAACTGTCTCGATTGGTCAGTGAACGGAATCTGC...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTTTCTTGCTCAACCTCTaGAACCTCCAGCAGATTCCG +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRFLLNL*NLQQIP
Trigger: CGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAA...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACTTCTTGCTCAACCTCTaGAACCTCCAGCAGATTCCG +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANFLLNL*NLQQIP
Trigger: CGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAA...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAAAACACCTTTATTCCTaGGGTCCATCATTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRKHLYS*GPSLVL
Trigger: CAGGACTAATGATGGACCTCAGGAATAAAGGTGTTT...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp AACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAACCCTTCCTTTGATGAGATaGTCCAGGGTTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: NHVSVGYLEMSSNNQHRTLPLMR*SRVSCR
Trigger: CCTACATGAAACCCTGGATCATCTCATCAAAGGAAG...GGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp AACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAACCAACACAATGATATCCTaGGGTCTGTCTCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: NHVSVGYLEMSSNNQHRTNTMIS*GLSLSV
Trigger: CACACTCAGAGACAGACCTCAGGATATCATTGTGTT...GGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTGGCGGGTGGATCGCTTaGGCCCAGGAGTTCGAAACC +
Preference number: 4 (lower is better)
Translates to: LREEKGSQGVWYVHQMITGGWIA*AQEFET
Trigger: GGTTTCGAACTCCTGGGCTCAAGCGATCCACCCGCC...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000644526.1
CDS-3UTR TCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCGCTGACCTTGATGTaGCTTGAGAGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVSLTLM*LESSPC
Trigger: GCAAGGAGAGCTCTCAAGTCACATCAAGGTCAGCGA...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGTGGGCTACCTGGAGATaGGTTCTAACAACCAGCACA +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWWATWR*VLTTST
Trigger: TGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCA...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACTGGGCTACCTGGAGATaGGTTCTAACAACCAGCACA +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANWATWR*VLTTST
Trigger: TGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCA...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACGTAGGTTTTCAGAAATaGGTTGTGCAGGAATGTGGT +
Preference number: 4 (lower is better)
Translates to: LGQLWESCVCANHVSVGYVGFQK*VVQECG
Trigger: ACCACATTCCTGCACAACTCATTTCTGAAAACCTAC...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000644510.2
CDS-3UTR TCA 90 bp AACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACTTCATGGCGGCGAATTaGCAAGTACCCTACAGCCCT +
Preference number: 4 (lower is better)
Translates to: NQHRTQSCSPTPLFSRENFMAAN*QVPYSP
Trigger: AGGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAA...GTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR GCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTACCTATTGCCCTTTGGTaGTGGAGGCCCAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLPIALW*WRPSGS
Trigger: GCTGCCGCTGGGCCTCCAGCACCAAAGGGCAATAGG...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR GCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGTCCTGGCAGGCTATTaGTGCTGTGTCGCTCATAAT +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWVLAGY*CCVAHN
Trigger: ATTATGAGCGACACAGCAGCAATAGCCTGCCAGGAC...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAAACACCATATTCAACAACTaGAGACACGAGCTTTCGATA +
Preference number: 4 (lower is better)
Translates to: GASQDNPHSRSGAVQVINTIFNN*RHELSI
Trigger: TATCGAAAGCTCGTGTCTGCAGTTGTTGAATATGGT...GTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR GCA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTTCTCTTTTCGTGTTGTaGACTGTGGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCSLFVL*TVVPPR
Trigger: CCTGGGAGGCACCACAGTGCACAACACGAAAAGAGA...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTTCCTTGCTTCGGCTGTaGAGTCCAGAAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCSLLRL*SPEART
Trigger: AGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGA...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTCTTGAGAGCTCTCCTTaGTTCGGCTGTGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSLESSP*FGCAVQ
Trigger: CTGGACTGCACAGCCGAAGCAAGGAGAGCTCTCAAG...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGCAAGAGAGGAAGCTGTaGCCTTCCCCCAACCACCGT +
Preference number: 4 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLQERKL*PSPNHR
Trigger: ACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTG...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTACAAGAGAGGAAGCTGTaGCCTTCCCCCAACCACCGT +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLQERKL*PSPNHR
Trigger: ACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTG...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAAGAGAGGAAGCTGTaGCCTTCCCCCAACCACCGT +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGQERKL*PSPNHR
Trigger: ACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTG...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCAAACTTTTCGTGTTGTaGACTGTGGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTKLFVL*TVVPPR
Trigger: CCTGGGAGGCACCACAGTGCACAACACGAAAAGTTT...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAGGCACAAGGTTTGCTTaGAAGCAGGAACGACGGAGT +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVGTRFA*KQERRS
Trigger: ACTCCGTCGTTCCTGCTTCCAAGCAAACCTTGTGCC...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CCA 90 bp AACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAACCCAAACTCTGTCACTTTaGGGTTCTGCAGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: NHVSVGYLEMSSNNQHRTQTLSL*GSAEAF
Trigger: AAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTG...GGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTTCGTGTTGTGCACTGTaGTGCCTCCCAGGACAATCC +
Preference number: 4 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSSCCAL*CLPGQS
Trigger: GGATTGTCCTGGGAGGCACCACAGTGCACAACACGA...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp GCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AVQKPELPLGNFSCCALWLLGQL*ESCVCA
Trigger: GGCACAGACACAAGACTCCCAGAGTTGTCCTAACAA...CCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGAGGAAGCCAAGGAGTGTaGTATGTACATCAAATGATT +
Preference number: 4 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRGSQGV*YVHQMI
Trigger: AATCATTTGATGTACATACCACACTCCTTGGCTTCC...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
3UTR CAA 72 bp AGCATCACCAGGCGGGCAGCATCAAACTCTGTCACTTaGGGGTTCTGCAGAAGCCTTTTTATATTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SITRRAASNSVT*GFCRSLFIFWR
Trigger: TCTCCAGAATATAAAAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGATGCTGCCCGCCTGGTGATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR TCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAATTTCTTGCATGGCAGTaGGAGATGAGGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQFLAWQ*EMRARE
Trigger: CTCCCTTGCCCTCATCTCTCACTGCCATGCAAGAAA...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR TCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGATGGAGCCTCGCGAAATaGGGAACCTGGCACAAGGTT +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGWSLAK*GTWHKV
Trigger: AACCTTGTGCCAGGTTCCTCATTTCGCGAGGCTCCA...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR TCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGATCAGCTTCAGCCAATaGCTTCACGTCACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWISFSQ*LHVTLA
Trigger: AGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGAT...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTTCGTGGACCATGGCCTaGTATGTCCACTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSSWTMA*YVHWFS
Trigger: GCTAAACCAGTGGACATATCAGGCCATGGTCCACGA...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp TTGATGAAGAAGGATTACTTGCCTTTTTATCTCTTGCTCTGCCTGGCACAGTGCTCGTGGACCATGGCCTaGTATGTCCACTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: LMKKDYLPFYLLLCLAQCSWTMA*YVHWFS
Trigger: GCTAAACCAGTGGACATATCAGGCCATGGTCCACGA...GCACTGTGCCAGGCAGAGCAAGAGATAAAAAGGCAAGTAATCCTTCTTCATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR TCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGGCAGATTCCGTTCACTaGCCAATCGAGACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQADSVH*PIETVL
Trigger: GAGAACTGTCTCGATTGGTCAGTGAACGGAATCTGC...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAGCAGATTCCGTTCACTaGCCAATCGAGACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVADSVH*PIETVL
Trigger: GAGAACTGTCTCGATTGGTCAGTGAACGGAATCTGC...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATTCTTGCTCAACCTCTaGAACCTCCAGCAGATTCCG +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVFLLNL*NLQQIP
Trigger: CGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAA...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGACAATTACAAACACAATaGTATCCTGAGGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRQLQTQ*YPEVCL
Trigger: GAGACAGACCTCAGGATATCATTGTGTTTGTAATTG...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTCAATTACAAACACAATaGTATCCTGAGGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ESCVCANHVSVGYLEMSSQLQTQ*YPEVCL
Trigger: GAGACAGACCTCAGGATATCATTGTGTTTGTAATTG...AGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTTGGGCTACCTGGAGATaGGTTCTAACAACCAGCACA +
Preference number: 4 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCWATWR*VLTTST
Trigger: TGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCA...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTGGGCTACCTGGAGATaGGTTCTAACAACCAGCACA +
Preference number: 4 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQWATWR*VLTTST
Trigger: TGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCA...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTCGGAGAAAAGTGGGTTaGGATGGGCTCAGACTTATT +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRRRKVG*DGLRLI
Trigger: AATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCG...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCCGGAGAAAAGTGGGTTaGGATGGGCTCAGACTTATT +
Preference number: 4 (lower is better)
Translates to: DLLLGQLWESCVCANHVSRRKVG*DGLRLI
Trigger: AATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCG...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCAGAGCTGTAAGCCCTTaGGTTGTTCTAGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTRAVSP*VVLDSW
Trigger: CCAGCTATCTAGAACAACTCAAGGGCTTACAGCTCT...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCAGAGCTGTAAGCCCTTaGGTTGTTCTAGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: DLLLGQLWESCVCANHVSRAVSP*VVLDSW
Trigger: CCAGCTATCTAGAACAACTCAAGGGCTTACAGCTCT...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTTCATGGCGGCGAATTaGCAAGTACCCTACAGCCCT +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGFMAAN*QVPYSP
Trigger: AGGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAA...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR GCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCACCTGGCACAAGGTTTaGTTGGAAGCAGGAACGACG +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGTWHKV*LEAGTT
Trigger: CGTCGTTCCTGCTTCCAAGCAAACCTTGTGCCAGGT...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR GCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTCCAACCACTGTCACATaGTTTGAAACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRPTTVT*FETVPD
Trigger: GTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGG...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGCTGGCAGGCTATTGCTaGTGTGTCGCTCATAATGTA +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWLAGYC*CVAHNV
Trigger: TACATTATGAGCGACACAGCAGCAATAGCCTGCCAG...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAGTCCTGGCAGGCTATTaGTGCTGTGTCGCTCATAAT +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVVLAGY*CCVAHN
Trigger: ATTATGAGCGACACAGCAGCAATAGCCTGCCAGGAC...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGTCACTCCAGGAGTGGTaGGGTTCAGGTTATAAACTG +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWSLQEW*GSGYKL
Trigger: CAGTTTATAACCTGAACCGCACCACTCCTGGAGTGA...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTCACTCCAGGAGTGGTaGGGTTCAGGTTATAAACTG +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTSLQEW*GSGYKL
Trigger: CAGTTTATAACCTGAACCGCACCACTCCTGGAGTGA...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAATGTTGTGCACTGTGGTaGCTCCCAGGACAATCCTCA +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQCCALW*LPGQSS
Trigger: TGAGGATTGTCCTGGGAGGCACCACAGTGCACAACA...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCCTTGCTTCGGCTGTaGAGTCCAGAAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGSLLRL*SPEART
Trigger: AGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGA...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAATCCTTGCTTCGGCTGTaGAGTCCAGAAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQSLLRL*SPEART
Trigger: AGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGA...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGCAAGAGAGGAAGCTGTaGCCTTCCCCCAACCACCGT +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMQERKL*PSPNHR
Trigger: ACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTG...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACCAAGAGAGGAAGCTGTaGCCTTCCCCCAACCACCGT +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYQERKL*PSPNHR
Trigger: ACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTG...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTAAACTTTTCGTGTTGTaGACTGTGGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCKLFVL*TVVPPR
Trigger: CCTGGGAGGCACCACAGTGCACAACACGAAAAGTTT...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGATATTCTCCACCCACCTaGGGCCTGAAGATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGYSPPT*GLKMPE
Trigger: CTCAGGCATCTTCAGGCCGCAGGTGGGTGGAGAATA...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS-3UTR GCA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGATGGCCGGGTCTCAGCTaGTTCCTCCCAGCCGGGATT +
Preference number: 4 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRWPGLS*FLPAGI
Trigger: AATCCCGGCTGGGAGGAAGCAGCTGAGACCCGGCCA...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535106.5
ENST00000611412.4
CDS-3UTR CCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCGGCACAAGGTTTGCTTaGAAGCAGGAACGACGGAGT +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGGTRFA*KQERRS
Trigger: ACTCCGTCGTTCCTGCTTCCAAGCAAACCTTGTGCC...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTTTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRLLGQL*ESCVCA
Trigger: GGCACAGACACAAGACTCCCAGAGTTGTCCTAACAA...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACGAGGGAAAACAAATGTaGGTTCACAGCAATGTAATC +
Preference number: 4 (lower is better)
Translates to: LGQLWESCVCANHVSVGYEGKQM*VHSNVI
Trigger: GATTACATTGCTGTGAACCCACATTTGTTTTCCCTC...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTATCAGCTTCAGCCAATaGCTTCACGTCACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCISFSQ*LHVTLA
Trigger: AGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGAT...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCTTAGTTATCACTTGCTaGACCTCAGCCACAACTTCC +
Preference number: 4 (lower is better)
Translates to: DLLLGQLWESCVCANHVSLVITC*TSATTS
Trigger: GGAAGTTGTGGCTGAGGTTCAGCAAGTGATAACTAA...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
CDS-3UTR TCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATCGTGGACCATGGCCTaGTATGTCCACTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLSWTMA*YVHWFS
Trigger: GCTAAACCAGTGGACATATCAGGCCATGGTCCACGA...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCTCTTAAGTCTTTACTaGTTCCCGGCACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANLLSLY*FPALWK
Trigger: TTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAG...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTTCTTGCTCAACCTCTaGAACCTCCAGCAGATTCCG +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGFLLNL*NLQQIP
Trigger: CGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAA...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTCTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRLEWSF*QASSCS
Trigger: TGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAG...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTCTTCCTTTGATGAGATaGTCCAGGGTTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRLPLMR*SRVSCR
Trigger: CCTACATGAAACCCTGGATCATCTCATCAAAGGAAG...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAATGGGCTACCTGGAGATaGGTTCTAACAACCAGCACA +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQWATWR*VLTTST
Trigger: TGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCA...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGCGGAGAAAAGTGGGTTaGGATGGGCTCAGACTTATT +
Preference number: 4 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQRRKVG*DGLRLI
Trigger: AATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCG...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCGGAGAAAAGTGGGTTaGGATGGGCTCAGACTTATT +
Preference number: 4 (lower is better)
Translates to: NQHRTQSCSPTPLFSRENRRKVG*DGLRLI
Trigger: AATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCG...GTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTGGTATGTACATCAAATaGTTACTTTTTAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ESCVCANHVSVGYLEMSSGMYIK*LLFKPL
Trigger: GAGGGGCTTAAAAAGTAATCATTTGATGTACATACC...AGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTAGAGCTGTAAGCCCTTaGGTTGTTCTAGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCRAVSP*VVLDSW
Trigger: CCAGCTATCTAGAACAACTCAAGGGCTTACAGCTCT...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTCCAACCACTGTCACATaGTTTGAAACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCPTTVT*FETVPD
Trigger: GTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGG...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAACCGTCACTTTGGGGTTCTaGAGAAGCCTTTTTATATTC +
Preference number: 4 (lower is better)
Translates to: NHVSVGYLEMSSNNQHRTVTLGF*RSLFIF
Trigger: GAATATAAAAAGGCTTCTGCAGAACCCCAAAGTGAC...GGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGCTGGCAGGCTATTGCTaGTGTGTCGCTCATAATGTA +
Preference number: 4 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQLAGYC*CVAHNV
Trigger: TACATTATGAGCGACACAGCAGCAATAGCCTGCCAG...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAAGTCCTGGCAGGCTATTaGTGCTGTGTCGCTCATAAT +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQVLAGY*CCVAHN
Trigger: ATTATGAGCGACACAGCAGCAATAGCCTGCCAGGAC...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTCACTCCAGGAGTGGTaGGGTTCAGGTTATAAACTG +
Preference number: 4 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQSLQEW*GSGYKL
Trigger: CAGTTTATAACCTGAACCGCACCACTCCTGGAGTGA...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATCTCTTTTCGTGTTGTaGACTGTGGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLSLFVL*TVVPPR
Trigger: CCTGGGAGGCACCACAGTGCACAACACGAAAAGAGA...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000644526.1
CDS-3UTR GCA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTCCTTGCTTCGGCTGTaGAGTCCAGAAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLSLLRL*SPEART
Trigger: AGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGA...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATCCTTGCTTCGGCTGTaGAGTCCAGAAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLSLLRL*SPEART
Trigger: AGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGA...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACCTTGAGAGCTCTCCTTaGTTCGGCTGTGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYLESSP*FGCAVQ
Trigger: CTGGACTGCACAGCCGAAGCAAGGAGAGCTCTCAAG...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGCACAGAACCCAAAGCTaGTCTCCAACACCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWHRTQS*SPTPLF
Trigger: AAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTG...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACGGAGTCTTGTGTCTGTaGCAACCACGTATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYGVLCL*QPRIRG
Trigger: CCCACGGATACGTGGTTGGCACAGACACAAGACTCC...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCATCACACGCGGTATTTaGGAAACAGTGGTCGAGATT +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTITRGI*ETVVEI
Trigger: AATCTCGACCACTGTTTCGCAAATACCGCGTGTGAT...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643970.1
CDS-3UTR GCA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAATGGCCGGGTCTCAGCTaGTTCCTCCCAGCCGGGATT +
Preference number: 4 (lower is better)
Translates to: FHKMDFYCGHTWFLSATEWPGLS*FLPAGI
Trigger: AATCCCGGCTGGGAGGAAGCAGCTGAGACCCGGCCA...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535106.5
ENST00000611412.4
CDS-3UTR GCA 90 bp TTGATGAAGAAGGATTACTTGCCTTTTTATCTCTTGCTCTGCCTGGCACAGTGCTGCCTTTTTATCTCTTaGTCTGCCTGGCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: LMKKDYLPFYLLLCLAQCCLFIS*SAWHSA
Trigger: GGCACTGTGCCAGGCAGAGCAAGAGATAAAAAGGCA...GCACTGTGCCAGGCAGAGCAAGAGATAAAAAGGCAAGTAATCCTTCTTCATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAAGTAGTTCGTGGACCATaGCCTGATATGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQVVRGP*PDMSTG
Trigger: ACCAGTGGACATATCAGGCCATGGTCCACGAACTAC...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACAGCCTTTTTATATTCTaGAGAGCACTAGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: LGQLWESCVCANHVSVGYSLFIF*RALEWS
Trigger: TGACCATTCTAGTGCTCTCCAGAATATAAAAAGGCT...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCCAAACTCTGTCACTTTaGGGTTCTGCAGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: DLLLGQLWESCVCANHVSQTLSL*GSAEAF
Trigger: AAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTG...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGCAAACTCTGTCACTTTaGGGTTCTGCAGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWQTLSL*GSAEAF
Trigger: AAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTG...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACGAGCCTCTTCATAGGTaGCTCCTCCAATTACAAACA +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANEPLHR*LLQLQT
Trigger: TGTTTGTAATTGGAGGAGCCACCTATGAAGAGGCTC...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTGAGCCTCTTCATAGGTaGCTCCTCCAATTACAAACA +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPREPLHR*LLQLQT
Trigger: TGTTTGTAATTGGAGGAGCCACCTATGAAGAGGCTC...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCGAGCCTCTTCATAGGTaGCTCCTCCAATTACAAACA +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTEPLHR*LLQLQT
Trigger: TGTTTGTAATTGGAGGAGCCACCTATGAAGAGGCTC...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp AACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACTCCTCACTCCAGGAGTaGTGCGGTTCAGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: NQHRTQSCSPTPLFSRENSSLQE*CGSGYK
Trigger: TTTATAACCTGAACCGCACCACTCCTGGAGTGAGGA...GTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTCCTCACTCCAGGAGTaGTGCGGTTCAGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQSSLQE*CGSGYK
Trigger: TTTATAACCTGAACCGCACCACTCCTGGAGTGAGGA...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTTCCTCACTCCAGGAGTaGTGCGGTTCAGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCSSLQE*CGSGYK
Trigger: TTTATAACCTGAACCGCACCACTCCTGGAGTGAGGA...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTCGTGTTGTGCACTGTaGTGCCTCCCAGGACAATCC +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYSCCAL*CLPGQS
Trigger: GGATTGTCCTGGGAGGCACCACAGTGCACAACACGA...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVLLGQL*ESCVCA
Trigger: GGCACAGACACAAGACTCCCAGAGTTGTCCTAACAA...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAAACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACAATCCGGAAGCCAAGGAGTGTaGTATGTACATCAAATGATT +
Preference number: 4 (lower is better)
Translates to: LPLGNFSCCALWCLPGQSGSQGV*YVHQMI
Trigger: AATCATTTGATGTACATACCACACTCCTTGGCTTCC...GGATTGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTTCCCAATTTCGACCCTaGCAGCAACCCAAAATATTG +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRSQFRP*QQPKIL
Trigger: CAATATTTTGGGTTGCTGCCAGGGTCGAAATTGGGA...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCGTTGTTCTAGATAGCTaGGCTGGATCCCAATTTCGA +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTVVLDS*AGSQFR
Trigger: TCGAAATTGGGATCCAGCCCAGCTATCTAGAACAAC...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp CCTTGCTTCGGCTGTGCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGGCTGATAACGAATCATaGGACACTTCTTCAGAGATA +
Preference number: 4 (lower is better)
Translates to: PCFGCAVQKPELPLGNFSADNES*DTSSEI
Trigger: TATCTCTGAAGAAGTGTCCCATGATTCGTTATCAGC...CGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR CCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTCAAAAACCACGTTCATaGCGGCGAATTGACAAGTAC +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRQKPRS*RRIDKY
Trigger: GTACTTGTCAATTCGCCGCCATGAACGTGGTTTTTG...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
3UTR CAA 72 bp TTACTGATTCCCGGCACTCTGGAAAGATCAATCCGATaGTTGTTTATGCCTAGTAGTTCGTGGACCATGGCC +
Preference number: 4 (lower is better)
Translates to: LLIPGTLERSIR*LFMPSSSWTMA
Trigger: GGCCATGGTCCACGAACTACTAGGCATAAACAACAATCGGATTGATCTTTCCAGAGTGCCGGGAATCAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR TCA 90 bp GGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAAACTGTTAGAGCCTCCTTCAGGTGTTTCATaGTCTCTCGATTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: GQSSLQEWCGSGYKLLEPPSGVS*SLDFEN
Trigger: ATTCTCAAAATCGAGAGATCATGAAACACCTGAAGG...AGGCTCTAACAGTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR TCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAAATCAGCTTCAGCCAATaGCTTCACGTCACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQISFSQ*LHVTLA
Trigger: AGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGAT...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGAGGTTTAGCAATGGGGTaGTGGCATCATCACAGCGAT +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGGLAMG*WHHHSD
Trigger: ATCGCTGTGATGATGCCATCACCCCATTGCTAAACC...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATGAAACTGGCTCAGAGATTAAGTCAACAGCTCCATGTCACAAAGCCTGTAAGTGGTTTAGCAATGGGGTaGTGGCATCATCACAGCGAT +
Preference number: 4 (lower is better)
Translates to: MKLAQRLSQQLHVTKPVSGLAMG*WHHHSD
Trigger: ATCGCTGTGATGATGCCATCACCCCATTGCTAAACC...ACTTACAGGCTTTGTGACATGGAGCTGTTGACTTAATCTCTGAGCCAGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR TCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTCTCTTAAGTCTTTACTaGTTCCCGGCACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCLLSLY*FPALWK
Trigger: TTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAG...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTACTCTTAAGTCTTTACTaGTTCCCGGCACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVLLSLY*FPALWK
Trigger: TTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAG...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAACCTCCCAGACATTTTCTTaGACTGTGGATAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: NHVSVGYLEMSSNNQHRTSQTFS*TVDNSQ
Trigger: TTGAGAATTATCCACAGTTCAAGAAAATGTCTGGGA...GGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTCACTGTCACATGCTTTaGAACAGTCCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRHCHML*NSPRHF
Trigger: AAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTG...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACTGTCACATGCTTTaGAACAGTCCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANHCHML*NSPRHF
Trigger: AAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTG...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGGCAGATTCCGTTCACTaGCCAATCGAGACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLADSVH*PIETVL
Trigger: GAGAACTGTCTCGATTGGTCAGTGAACGGAATCTGC...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGATTCTTGCTCAACCTCTaGAACCTCCAGCAGATTCCG +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGFLLNL*NLQQIP
Trigger: CGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAA...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTCTTGCTCAACCTCTaGAACCTCCAGCAGATTCCG +
Preference number: 4 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLFLLNL*NLQQIP
Trigger: CGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAA...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATGAAACTGGCTCAGAGATTAAGTCAACAGCTCCATGTCACAAAGCCTGTAAGTTTCTTGCTCAACCTCTaGAACCTCCAGCAGATTCCG +
Preference number: 4 (lower is better)
Translates to: MKLAQRLSQQLHVTKPVSFLLNL*NLQQIP
Trigger: CGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAA...ACTTACAGGCTTTGTGACATGGAGCTGTTGACTTAATCTCTGAGCCAGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR TCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTCTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCLEWSF*QASSCS
Trigger: TGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAG...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGCTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQLEWSF*QASSCS
Trigger: TGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAG...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCAAACACCTTTATTCCTaGGGTCCATCATTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DLLLGQLWESCVCANHVSKHLYS*GPSLVL
Trigger: CAGGACTAATGATGGACCTCAGGAATAAAGGTGTTT...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ACTTCCTCTGACTCGTTTACCACCATATTCAACAACTGCAGACACGAGCTTTCGCTTCCTTTGATGAGATaGTCCAGGGTTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: TSSDSFTTIFNNCRHELSLPLMR*SRVSCR
Trigger: CCTACATGAAACCCTGGATCATCTCATCAAAGGAAG...CGAAAGCTCGTGTCTGCAGTTGTTGAATATGGTGGTAAACGAGTCAGAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR TCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTAACACAATGATATCCTaGGGTCTGTCTCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCNTMIS*GLSLSV
Trigger: CACACTCAGAGACAGACCTCAGGATATCATTGTGTT...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGTCGCTGACCTTGATGTaGCTTGAGAGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMSLTLM*LESSPC
Trigger: GCAAGGAGAGCTCTCAAGTCACATCAAGGTCAGCGA...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ACAAATGTGGGTTCACAGCAATGTAATCACCATAAAATTCCTGAACCTCAGCCATCGCTGACCTTGATGTaGCTTGAGAGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: TNVGSQQCNHHKIPEPQPSLTLM*LESSPC
Trigger: GCAAGGAGAGCTCTCAAGTCACATCAAGGTCAGCGA...TGGCTGAGGTTCAGGAATTTTATGGTGATTACATTGCTGTGAACCCACATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR TCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACGGAGAAAAGTGGGTTaGGATGGGCTCAGACTTATT +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQRRKVG*DGLRLI
Trigger: AATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCG...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTGTAGGTTTTCAGAAATaGGTTGTGCAGGAATGTGGT +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRVGFQK*VVQECG
Trigger: ACCACATTCCTGCACAACTCATTTCTGAAAACCTAC...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTTCATGGCGGCGAATTaGCAAGTACCCTACAGCCCT +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYFMAAN*QVPYSP
Trigger: AGGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAA...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR TCA 90 bp CTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACAATCCAACACAATGATATCCTaGGGTAAATGGTACAGTTCT +
Preference number: 4 (lower is better)
Translates to: LPLGNFSCCALWCLPGQSNTMIS*GKWYSS
Trigger: AGAACTGTACCATTTACCTCAGGATATCATTGTGTT...GGATTGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491789.2
CDS-3UTR TCA 90 bp GGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAAACTGTTAGAGCCTACGTCTCTTTATCCATaGGAAGTACTTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: GQSSLQEWCGSGYKLLEPTSLYP*EVLSYQ
Trigger: CTGGTATGAAAGTACTTCTCATGGATAAAGAGACGT...AGGCTCTAACAGTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR GCA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACGATTTTGAGAATCAATaGGTTCAAAGAGGTACACTT +
Preference number: 4 (lower is better)
Translates to: LGQLWESCVCANHVSVGYDFENQ*VQRGTL
Trigger: AAGTGTACCTCTTTGAACGCATTGATTCTCAAAATC...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491789.2
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCTCCGATTGTTGTTTATaGCTAGTAGTTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: DLLLGQLWESCVCANHVSSDCCL*LVVRGP
Trigger: TGGTCCACGAACTACTAGGCATAAACAACAATCGGA...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTCCAACCACTGTCACATaGTTTGAAACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSPTTVT*FETVPD
Trigger: GTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGG...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCCTGGCAGGCTATTGCTaGTGTGTCGCTCATAATGTA +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGLAGYC*CVAHNV
Trigger: TACATTATGAGCGACACAGCAGCAATAGCCTGCCAG...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTAGTCCTGGCAGGCTATTaGTGCTGTGTCGCTCATAAT +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLVLAGY*CCVAHN
Trigger: ATTATGAGCGACACAGCAGCAATAGCCTGCCAGGAC...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAATCACTCCAGGAGTGGTaGGGTTCAGGTTATAAACTG +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQSLQEW*GSGYKL
Trigger: CAGTTTATAACCTGAACCGCACCACTCCTGGAGTGA...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTGTTGTGCACTGTGGTaGCTCCCAGGACAATCCTCA +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYCCALW*LPGQSS
Trigger: TGAGGATTGTCCTGGGAGGCACCACAGTGCACAACA...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTCCTTGCTTCGGCTGTaGAGTCCAGAAGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYSLLRL*SPEART
Trigger: AGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGA...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACTTCCTCTGACTCGTTTACCACCATATTCAACAACTGCAGACACGAGCTTTCGCACAGAACCCAAAGCTaGTCTCCAACACCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TSSDSFTTIFNNCRHELSHRTQS*SPTPLF
Trigger: AAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTG...CGAAAGCTCGTGTCTGCAGTTGTTGAATATGGTGGTAAACGAGTCAGAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR GCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTACACAGAACCCAAAGCTaGTCTCCAACACCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVHRTQS*SPTPLF
Trigger: AAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTG...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCAACAAATGTGGGTACTaGTTCACAGCAAAAACCACG +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTNKCGY*FTAKTT
Trigger: CGTGGTTTTTGCTGTGAAGCAGTACCCACATTTGTT...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611412.4
CDS-3UTR CCA 90 bp CCTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAGGAACGACGGAGTGTaGCTACGTGCCCTATTTGCC +
Preference number: 4 (lower is better)
Translates to: PFTKWIFIVVIHGFSVPQRNDGV*LRALFA
Trigger: GGCAAATAGGGCACGTAGCCACACTCCGTCGTTCCT...CTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS-3UTR CCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTAGTAGTTCGTGGACCATaGCCTGATATGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLVVRGP*PDMSTG
Trigger: ACCAGTGGACATATCAGGCCATGGTCCACGAACTAC...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ACTTCCTCTGACTCGTTTACCACCATATTCAACAACTGCAGACACGAGCTTTCGGAGCCTCTTCATAGGTaGCTCCTCCAATTACAAACA +
Preference number: 4 (lower is better)
Translates to: TSSDSFTTIFNNCRHELSEPLHR*LLQLQT
Trigger: TGTTTGTAATTGGAGGAGCCACCTATGAAGAGGCTC...CGAAAGCTCGTGTCTGCAGTTGTTGAATATGGTGGTAAACGAGTCAGAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR CCA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGAGCCTCTTCATAGGTaGCTCCTCCAATTACAAACA +
Preference number: 4 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCEPLHR*LLQLQT
Trigger: TGTTTGTAATTGGAGGAGCCACCTATGAAGAGGCTC...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTTCGTGTTGTGCACTGTaGTGCCTCCCAGGACAATCC +
Preference number: 4 (lower is better)
Translates to: LREEKGSQGVWYVHQMITSCCAL*CLPGQS
Trigger: GGATTGTCCTGGGAGGCACCACAGTGCACAACACGA...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AGTTCTCCAACCACTGTCACATGCTTTGAAACAGTCCCAGACATTTTCTTGAACACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SSPTTVTCFETVPDIFLNTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...GTTCAAGAAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR CCA 90 bp AGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACAGGAAGCCAAGGAGTGTaGTATGTACATCAAATGATT +
Preference number: 4 (lower is better)
Translates to: RTSSRKLFVLCTVVPPRTGSQGV*YVHQMI
Trigger: AATCATTTGATGTACATACCACACTCCTTGGCTTCC...TGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTCAAAAACCACGTTCATaGCGGCGAATTGACAAGTAC +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCQKPRS*RRIDKY
Trigger: GTACTTGTCAATTCGCCGCCATGAACGTGGTTTTTG...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCCCTTCAGGTGTTTCATaGTCTCTCGATTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: DLLLGQLWESCVCANHVSPSGVS*SLDFEN
Trigger: ATTCTCAAAATCGAGAGATCATGAAACACCTGAAGG...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTCCTTCAGGTGTTTCATaGTCTCTCGATTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRPSGVS*SLDFEN
Trigger: ATTCTCAAAATCGAGAGATCATGAAACACCTGAAGG...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCCTTCAGGTGTTTCATaGTCTCTCGATTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANPSGVS*SLDFEN
Trigger: ATTCTCAAAATCGAGAGATCATGAAACACCTGAAGG...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGAATCAGCTTCAGCCAATaGCTTCACGTCACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGISFSQ*LHVTLA
Trigger: AGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGAT...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGTTTAGCAATGGGGTaGTGGCATCATCACAGCGAT +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMGLAMG*WHHHSD
Trigger: ATCGCTGTGATGATGCCATCACCCCATTGCTAAACC...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACATCCCAGACATTTTCTTaGACTGTGGATAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: RTSSRKLFVLCTVVPPRTSQTFS*TVDNSQ
Trigger: TTGAGAATTATCCACAGTTCAAGAAAATGTCTGGGA...TGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR TCA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTCACTGTCACATGCTTTaGAACAGTCCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCHCHML*NSPRHF
Trigger: AAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTG...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGCAGATTCCGTTCACTaGCCAATCGAGACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMADSVH*PIETVL
Trigger: GAGAACTGTCTCGATTGGTCAGTGAACGGAATCTGC...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GATTTTGAGAATCAATGCGTTCAAAGAGGTACACTTCCTTCTGTAGAATCTCCGGCAGATTCCGTTCACTaGCCAATCGAGACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: DFENQCVQRGTLPSVESPADSVH*PIETVL
Trigger: GAGAACTGTCTCGATTGGTCAGTGAACGGAATCTGC...CGGAGATTCTACAGAAGGAAGTGTACCTCTTTGAACGCATTGATTCTCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR TCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGTTCTTGCTCAACCTCTaGAACCTCCAGCAGATTCCG +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMFLLNL*NLQQIP
Trigger: CGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAA...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCCTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGLEWSF*QASSCS
Trigger: TGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAG...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCCTTCCTTTGATGAGATaGTCCAGGGTTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGLPLMR*SRVSCR
Trigger: CCTACATGAAACCCTGGATCATCTCATCAAAGGAAG...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCAACACAATGATATCCTaGGGTCTGTCTCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGNTMIS*GLSLSV
Trigger: CACACTCAGAGACAGACCTCAGGATATCATTGTGTT...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGCAATTACAAACACAATaGTATCCTGAGGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWQLQTQ*YPEVCL
Trigger: GAGACAGACCTCAGGATATCATTGTGTTTGTAATTG...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTCAATTACAAACACAATaGTATCCTGAGGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRQLQTQ*YPEVCL
Trigger: GAGACAGACCTCAGGATATCATTGTGTTTGTAATTG...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTATCGCTGACCTTGATGTaGCTTGAGAGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLSLTLM*LESSPC
Trigger: GCAAGGAGAGCTCTCAAGTCACATCAAGGTCAGCGA...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGGTAGGTTTTCAGAAATaGGTTGTGCAGGAATGTGGT +
Preference number: 4 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQVGFQK*VVQECG
Trigger: ACCACATTCCTGCACAACTCATTTCTGAAAACCTAC...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACTCGTCTCTTTATCCATaGGAAGTACTTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANSSLYP*EVLSYQ
Trigger: CTGGTATGAAAGTACTTCTCATGGATAAAGAGACGA...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTATTCATGGCGGCGAATTaGCAAGTACCCTACAGCCCT +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLFMAAN*QVPYSP
Trigger: AGGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAA...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR GCA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTACCTGGCACAAGGTTTaGTTGGAAGCAGGAACGACG +
Preference number: 4 (lower is better)
Translates to: LREEKGSQGVWYVHQMITTWHKV*LEAGTT
Trigger: CGTCGTTCCTGCTTCCAAGCAAACCTTGTGCCAGGT...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369128.9
ENST00000535106.5
CDS-3UTR GCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAACCTGGCACAAGGTTTaGTTGGAAGCAGGAACGACG +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLTWHKV*LEAGTT
Trigger: CGTCGTTCCTGCTTCCAAGCAAACCTTGTGCCAGGT...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR GCA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAACTCTCAGACCCCTATTaGCCTTTGGTGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: FHKMDFYCGHTWFLSATELSDPY*PLVLEA
Trigger: GGCCTCCAGCACCAAAGGGCAATAGGGGTCTGAGAG...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS-3UTR GCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTACCAACCACTGTCACATaGTTTGAAACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLPTTVT*FETVPD
Trigger: GTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGG...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACCAACCACTGTCACATaGTTTGAAACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGPTTVT*FETVPD
Trigger: GTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGG...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTGTCACTTTGGGGTTCTaGAGAAGCCTTTTTATATTC +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRVTLGF*RSLFIF
Trigger: GAATATAAAAAGGCTTCTGCAGAACCCCAAAGTGAC...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTACTGGCAGGCTATTGCTaGTGTGTCGCTCATAATGTA +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLLAGYC*CVAHNV
Trigger: TACATTATGAGCGACACAGCAGCAATAGCCTGCCAG...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGTCCTGGCAGGCTATTaGTGCTGTGTCGCTCATAAT +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMVLAGY*CCVAHN
Trigger: ATTATGAGCGACACAGCAGCAATAGCCTGCCAGGAC...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCACCATATTCAACAACTaGAGACACGAGCTTTCGATA +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTTIFNN*RHELSI
Trigger: TATCGAAAGCTCGTGTCTGCAGTTGTTGAATATGGT...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTACCATATTCAACAACTaGAGACACGAGCTTTCGATA +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRTIFNN*RHELSI
Trigger: TATCGAAAGCTCGTGTCTGCAGTTGTTGAATATGGT...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGATCACTCCAGGAGTGGTaGGGTTCAGGTTATAAACTG +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGSLQEW*GSGYKL
Trigger: CAGTTTATAACCTGAACCGCACCACTCCTGGAGTGA...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTATCTCTTTTCGTGTTGTaGACTGTGGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLSLFVL*TVVPPR
Trigger: CCTGGGAGGCACCACAGTGCACAACACGAAAAGAGA...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000644526.1
CDS-3UTR GCA 90 bp ACTGATTCTGGAATGCATGATCATATAGCTCCATTTCCTCACCAAATGAAAAAGCTTGAGAGCTCTCCTTaGTTCGGCTGTGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TDSGMHDHIAPFPHQMKKLESSP*FGCAVQ
Trigger: CTGGACTGCACAGCCGAAGCAAGGAGAGCTCTCAAG...CTTTTTCATTTGGTGAGGAAATGGAGCTATATGATCATGCATTCCAGAATCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491789.2
CDS-3UTR GCA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGACTTGAGAGCTCTCCTTaGTTCGGCTGTGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRLESSP*FGCAVQ
Trigger: CTGGACTGCACAGCCGAAGCAAGGAGAGCTCTCAAG...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ATGCATGATCATATAGCTCCATTTCCTCACCAAATGAAAAAGTTGCTTGCCTTTGGAGTCTTGTGTCTGTaGCAACCACGTATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: MHDHIAPFPHQMKKLLAFGVLCL*QPRIRG
Trigger: CCCACGGATACGTGGTTGGCACAGACACAAGACTCC...AAAGGCAAGCAACTTTTTCATTTGGTGAGGAAATGGAGCTATATGATCATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491789.2
CDS-3UTR GCA 90 bp ACAAATGTGGGTTCACAGCAATGTAATCACCATAAAATTCCTGAACCTCAGCCAAAACTTTTCGTGTTGTaGACTGTGGTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TNVGSQQCNHHKIPEPQPKLFVL*TVVPPR
Trigger: CCTGGGAGGCACCACAGTGCACAACACGAAAAGTTT...TGGCTGAGGTTCAGGAATTTTATGGTGATTACATTGCTGTGAACCCACATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR GCA 90 bp TTGATGAAGAAGGATTACTTGCCTTTTTATCTCTTGCTCTGCCTGGCACAGTGCTTTTATCTCTTGCTCTaGCTGGCACAGTGCCTTACA +
Preference number: 4 (lower is better)
Translates to: LMKKDYLPFYLLLCLAQCFYLLL*LAQCLT
Trigger: TGTAAGGCACTGTGCCAGGCAGAGCAAGAGATAAAA...GCACTGTGCCAGGCAGAGCAAGAGATAAAAAGGCAAGTAATCCTTCTTCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACGTAGTTCGTGGACCATaGCCTGATATGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYVVRGP*PDMSTG
Trigger: ACCAGTGGACATATCAGGCCATGGTCCACGAACTAC...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAAACTGTTAGAGCCTAGCCTTTTTATATTCTaGAGAGCACTAGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: GQSSLQEWCGSGYKLLEPSLFIF*RALEWS
Trigger: TGACCATTCTAGTGCTCTCCAGAATATAAAAAGGCT...AGGCTCTAACAGTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CCA 90 bp AGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACAAGCCTTTTTATATTCTaGAGAGCACTAGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: RTSSRKLFVLCTVVPPRTSLFIF*RALEWS
Trigger: TGACCATTCTAGTGCTCTCCAGAATATAAAAAGGCT...TGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCCAAACTCTGTCACTTTaGGGTTCTGCAGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGQTLSL*GSAEAF
Trigger: AAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTG...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACAAACTCTGTCACTTTaGGGTTCTGCAGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQQTLSL*GSAEAF
Trigger: AAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTG...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCGAGCCTCTTCATAGGTaGCTCCTCCAATTACAAACA +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGEPLHR*LLQLQT
Trigger: TGTTTGTAATTGGAGGAGCCACCTATGAAGAGGCTC...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGATCCTCACTCCAGGAGTaGTGCGGTTCAGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGSSLQE*CGSGYK
Trigger: TTTATAACCTGAACCGCACCACTCCTGGAGTGAGGA...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGATTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGLLGQL*ESCVCA
Trigger: GGCACAGACACAAGACTCCCAGAGTTGTCCTAACAA...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLLLGQL*ESCVCA
Trigger: GGCACAGACACAAGACTCCCAGAGTTGTCCTAACAA...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACGGAAGCCAAGGAGTGTaGTATGTACATCAAATGATT +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANGSQGV*YVHQMI
Trigger: AATCATTTGATGTACATACCACACTCCTTGGCTTCC...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCGGAAGCCAAGGAGTGTaGTATGTACATCAAATGATT +
Preference number: 4 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTGSQGV*YVHQMI
Trigger: AATCATTTGATGTACATACCACACTCCTTGGCTTCC...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTGAGGGAAAACAAATGTaGGTTCACAGCAATGTAATC +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPREGKQM*VHSNVI
Trigger: GATTACATTGCTGTGAACCCACATTTGTTTTCCCTC...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAATCCCAATTTCGACCCTaGCAGCAACCCAAAATATTG +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQSQFRP*QQPKIL
Trigger: CAATATTTTGGGTTGCTGCCAGGGTCGAAATTGGGA...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GCACTCTGGAAAGATCAATCCGATTGTTGTTTATGCCTAGTAGTTCGTGGACCATCCCAATTTCGACCCTaGCAGCAACCCAAAATATTG +
Preference number: 4 (lower is better)
Translates to: ALWKDQSDCCLCLVVRGPSQFRP*QQPKIL
Trigger: CAATATTTTGGGTTGCTGCCAGGGTCGAAATTGGGA...TGGTCCACGAACTACTAGGCATAAACAACAATCGGATTGATCTTTCCAGAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR CCA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGCTGATAACGAATCATaGGACACTTCTTCAGAGATA +
Preference number: 4 (lower is better)
Translates to: DLLLGQLWESCVCANHVSADNES*DTSSEI
Trigger: TATCTCTGAAGAAGTGTCCCATGATTCGTTATCAGC...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGCTGATAACGAATCATaGGACACTTCTTCAGAGATA +
Preference number: 4 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWADNES*DTSSEI
Trigger: TATCTCTGAAGAAGTGTCCCATGATTCGTTATCAGC...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTCAAAAACCACGTTCATaGCGGCGAATTGACAAGTAC +
Preference number: 4 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSQKPRS*RRIDKY
Trigger: GTACTTGTCAATTCGCCGCCATGAACGTGGTTTTTG...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR CCA 90 bp ATGAAACTGGCTCAGAGATTAAGTCAACAGCTCCATGTCACAAAGCCTGTAAGTAGGTGCTCATCAAATTaGACTGACCTGGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: MKLAQRLSQQLHVTKPVSRCSSN*TDLEST
Trigger: AGTGCTCTCCAGGTCAGTCCAATTTGATGAGCACCT...ACTTACAGGCTTTGTGACATGGAGCTGTTGACTTAATCTCTGAGCCAGTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR TCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTACCTTCAGGTGTTTCATaGTCTCTCGATTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVPSGVS*SLDFEN
Trigger: ATTCTCAAAATCGAGAGATCATGAAACACCTGAAGG...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTCCTTCAGGTGTTTCATaGTCTCTCGATTTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCPSGVS*SLDFEN
Trigger: ATTCTCAAAATCGAGAGATCATGAAACACCTGAAGG...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAGGTTTAGCAATGGGGTaGTGGCATCATCACAGCGAT +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLGLAMG*WHHHSD
Trigger: ATCGCTGTGATGATGCCATCACCCCATTGCTAAACC...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGATCGTGGACCATGGCCTaGTATGTCCACTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRSWTMA*YVHWFS
Trigger: GCTAAACCAGTGGACATATCAGGCCATGGTCCACGA...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTTCCCAGACATTTTCTTaGACTGTGGATAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRSQTFS*TVDNSQ
Trigger: TTGAGAATTATCCACAGTTCAAGAAAATGTCTGGGA...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACACTGTCACATGCTTTaGAACAGTCCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQHCHML*NSPRHF
Trigger: AAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTG...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CAAACACTCCAATCTAGATCTTCTGATTCTAGTTTGGTGCTCTTTCTAGTAGACGCAGATTCCGTTCACTaGCCAATCGAGACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: QTLQSRSSDSSLVLFLVDADSVH*PIETVL
Trigger: GAGAACTGTCTCGATTGGTCAGTGAACGGAATCTGC...GTCTACTAGAAAGAGCACCAAACTAGAATCAGAAGATCTAGATTGGAGTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR TCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCAAACACCTTTATTCCTaGGGTCCATCATTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGKHLYS*GPSLVL
Trigger: CAGGACTAATGATGGACCTCAGGAATAAAGGTGTTT...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTTTCAGCAGATAGGACCACTTCTCTTAAGTCTTTACTGATTCCCGGCACTCTGAAACACCTTTATTCCTaGGGTCCATCATTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: FSADRTTSLKSLLIPGTLKHLYS*GPSLVL
Trigger: CAGGACTAATGATGGACCTCAGGAATAAAGGTGTTT...CAGAGTGCCGGGAATCAGTAAAGACTTAAGAGAAGTGGTCCTATCTGCTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR TCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTACTTCCTTTGATGAGATaGTCCAGGGTTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLLPLMR*SRVSCR
Trigger: CCTACATGAAACCCTGGATCATCTCATCAAAGGAAG...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGATCGCTGACCTTGATGTaGCTTGAGAGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRSLTLM*LESSPC
Trigger: GCAAGGAGAGCTCTCAAGTCACATCAAGGTCAGCGA...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTATGGGCTACCTGGAGATaGGTTCTAACAACCAGCACA +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLWATWR*VLTTST
Trigger: TGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCA...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTGTAGGTTTTCAGAAATaGGTTGTGCAGGAATGTGGT +
Preference number: 4 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSVGFQK*VVQECG
Trigger: ACCACATTCCTGCACAACTCATTTCTGAAAACCTAC...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000644510.2
CDS-3UTR TCA 90 bp AACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACTCGTCTCTTTATCCATaGGAAGTACTTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: NQHRTQSCSPTPLFSRENSSLYP*EVLSYQ
Trigger: CTGGTATGAAAGTACTTCTCATGGATAAAGAGACGA...GTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000644510.2
CDS-3UTR TCA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTTCGTCTCTTTATCCATaGGAAGTACTTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCSSLYP*EVLSYQ
Trigger: CTGGTATGAAAGTACTTCTCATGGATAAAGAGACGA...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTTCCGATTGTTGTTTATaGCTAGTAGTTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSSDCCL*LVVRGP
Trigger: TGGTCCACGAACTACTAGGCATAAACAACAATCGGA...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCCGATTGTTGTTTATaGCTAGTAGTTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGSDCCL*LVVRGP
Trigger: TGGTCCACGAACTACTAGGCATAAACAACAATCGGA...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAGTCACTTTGGGGTTCTaGAGAAGCCTTTTTATATTC +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVVTLGF*RSLFIF
Trigger: GAATATAAAAAGGCTTCTGCAGAACCCCAAAGTGAC...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACCTGGCAGGCTATTGCTaGTGTGTCGCTCATAATGTA +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYLAGYC*CVAHNV
Trigger: TACATTATGAGCGACACAGCAGCAATAGCCTGCCAG...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp CCTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGGTCCTGGCAGGCTATTaGTGCTGTGTCGCTCATAAT +
Preference number: 4 (lower is better)
Translates to: PFTKWIFIVVIHGFSVPQVLAGY*CCVAHN
Trigger: ATTATGAGCGACACAGCAGCAATAGCCTGCCAGGAC...CTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACACCATATTCAACAACTaGAGACACGAGCTTTCGATA +
Preference number: 4 (lower is better)
Translates to: NQHRTQSCSPTPLFSRENTIFNN*RHELSI
Trigger: TATCGAAAGCTCGTGTCTGCAGTTGTTGAATATGGT...GTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR GCA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGCACAGAACCCAAAGCTaGTCTCCAACACCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLHRTQS*SPTPLF
Trigger: AAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTG...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAAGGAGTCTTGTGTCTGTaGCAACCACGTATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: FHKMDFYCGHTWFLSATEGVLCL*QPRIRG
Trigger: CCCACGGATACGTGGTTGGCACAGACACAAGACTCC...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAGTAGTTCGTGGACCATaGCCTGATATGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLVVRGP*PDMSTG
Trigger: ACCAGTGGACATATCAGGCCATGGTCCACGAACTAC...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CAAACACTCCAATCTAGATCTTCTGATTCTAGTTTGGTGCTCTTTCTAGTAGACGTAGTTCGTGGACCATaGCCTGATATGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: QTLQSRSSDSSLVLFLVDVVRGP*PDMSTG
Trigger: ACCAGTGGACATATCAGGCCATGGTCCACGAACTAC...GTCTACTAGAAAGAGCACCAAACTAGAATCAGAAGATCTAGATTGGAGTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTAGCCTTTTTATATTCTaGAGAGCACTAGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRSLFIF*RALEWS
Trigger: TGACCATTCTAGTGCTCTCCAGAATATAAAAAGGCT...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAGCCTTTTTATATTCTaGAGAGCACTAGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRSLFIF*RALEWS
Trigger: TGACCATTCTAGTGCTCTCCAGAATATAAAAAGGCT...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACAGCCTTTTTATATTCTaGAGAGCACTAGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: MGSDLLLGQLWESCVCANSLFIF*RALEWS
Trigger: TGACCATTCTAGTGCTCTCCAGAATATAAAAAGGCT...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTACAAACTCTGTCACTTTaGGGTTCTGCAGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLQTLSL*GSAEAF
Trigger: AAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTG...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGTCCTCACTCCAGGAGTaGTGCGGTTCAGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMSSLQE*CGSGYK
Trigger: TTTATAACCTGAACCGCACCACTCCTGGAGTGAGGA...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CCTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGACTACCGGAGAAAAGTaGGTTGAGATGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PFTKWIFIVVIHGFSVPQTTGEK*VEMGSD
Trigger: GTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGT...CTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTAGTTGTTCTAGATAGCTaGGCTGGATCCCAATTTCGA +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLVVLDS*AGSQFR
Trigger: TCGAAATTGGGATCCAGCCCAGCTATCTAGAACAAC...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAGCTGATAACGAATCATaGGACACTTCTTCAGAGATA +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVADNES*DTSSEI
Trigger: TATCTCTGAAGAAGTGTCCCATGATTCGTTATCAGC...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ATGAAACTGGCTCAGAGATTAAGTCAACAGCTCCATGTCACAAAGCCTGTAAGTCAAATTGGACTGACCTaGAGAGCACTAGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: MKLAQRLSQQLHVTKPVSQIGLT*RALEWS
Trigger: TGACCATTCTAGTGCTCTCCAGGTCAGTCCAATTTG...ACTTACAGGCTTTGTGACATGGAGCTGTTGACTTAATCTCTGAGCCAGTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR TCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAATCAGCTTCAGCCAATaGCTTCACGTCACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLISFSQ*LHVTLA
Trigger: AGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGAT...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAGGTTTAGCAATGGGGTaGTGGCATCATCACAGCGAT +
Preference number: 4 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRGLAMG*WHHHSD
Trigger: ATCGCTGTGATGATGCCATCACCCCATTGCTAAACC...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACCTCTTAAGTCTTTACTaGTTCCCGGCACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYLLSLY*FPALWK
Trigger: TTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAG...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTTCCCAGACATTTTCTTaGACTGTGGATAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCSQTFS*TVDNSQ
Trigger: TTGAGAATTATCCACAGTTCAAGAAAATGTCTGGGA...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACTCCCAGACATTTTCTTaGACTGTGGATAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: NQHRTQSCSPTPLFSRENSQTFS*TVDNSQ
Trigger: TTGAGAATTATCCACAGTTCAAGAAAATGTCTGGGA...GTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGCACTGTCACATGCTTTaGAACAGTCCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLHCHML*NSPRHF
Trigger: AAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTG...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATGCATGATCATATAGCTCCATTTCCTCACCAAATGAAAAAGTTGCTTGCCTTTTTCTTGCTCAACCTCTaGAACCTCCAGCAGATTCCG +
Preference number: 4 (lower is better)
Translates to: MHDHIAPFPHQMKKLLAFFLLNL*NLQQIP
Trigger: CGGAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAA...AAAGGCAAGCAACTTTTTCATTTGGTGAGGAAATGGAGCTATATGATCATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491789.2
CDS-3UTR TCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGAAAACACCTTTATTCCTaGGGTCCATCATTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGKHLYS*GPSLVL
Trigger: CAGGACTAATGATGGACCTCAGGAATAAAGGTGTTT...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACCTTCCTTTGATGAGATaGTCCAGGGTTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYLPLMR*SRVSCR
Trigger: CCTACATGAAACCCTGGATCATCTCATCAAAGGAAG...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGAACACAATGATATCCTaGGGTCTGTCTCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMNTMIS*GLSLSV
Trigger: CACACTCAGAGACAGACCTCAGGATATCATTGTGTT...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACAATTACAAACACAATaGTATCCTGAGGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQQLQTQ*YPEVCL
Trigger: GAGACAGACCTCAGGATATCATTGTGTTTGTAATTG...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTCAATTACAAACACAATaGTATCCTGAGGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSQLQTQ*YPEVCL
Trigger: GAGACAGACCTCAGGATATCATTGTGTTTGTAATTG...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAATCGCTGACCTTGATGTaGCTTGAGAGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FHKMDFYCGHTWFLSATESLTLM*LESSPC
Trigger: GCAAGGAGAGCTCTCAAGTCACATCAAGGTCAGCGA...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGGGTATGTACATCAAATaGTTACTTTTTAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQGMYIK*LLFKPL
Trigger: GAGGGGCTTAAAAAGTAATCATTTGATGTACATACC...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAGGTATGTACATCAAATaGTTACTTTTTAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SDLLLGQLWESCVCANHVGMYIK*LLFKPL
Trigger: GAGGGGCTTAAAAAGTAATCATTTGATGTACATACC...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGGTATGTACATCAAATaGTTACTTTTTAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCGMYIK*LLFKPL
Trigger: GAGGGGCTTAAAAAGTAATCATTTGATGTACATACC...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCGTCTCTTTATCCATaGGAAGTACTTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGSSLYP*EVLSYQ
Trigger: CTGGTATGAAAGTACTTCTCATGGATAAAGAGACGA...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTACTTCCTTTTTGAATTaGCTGATTCTGGAATGCATG +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCTSFLN*LILECM
Trigger: CATGCATTCCAGAATCAGTCAATTCAAAAAGGAAGT...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491789.2
CDS-3UTR GCA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGATTTTGAGAATCAATaGGTTCAAAGAGGTACACTT +
Preference number: 4 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRDFENQ*VQRGTL
Trigger: AAGTGTACCTCTTTGAACGCATTGATTCTCAAAATC...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTCCAACCACTGTCACATaGTTTGAAACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: LREEKGSQGVWYVHQMITPTTVT*FETVPD
Trigger: GTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGG...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp CAAACACTCCAATCTAGATCTTCTGATTCTAGTTTGGTGCTCTTTCTAGTAGACCCAACCACTGTCACATaGTTTGAAACAGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: QTLQSRSSDSSLVLFLVDPTTVT*FETVPD
Trigger: GTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGG...GTCTACTAGAAAGAGCACCAAACTAGAATCAGAAGATCTAGATTGGAGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR GCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAAGTCACTTTGGGGTTCTaGAGAAGCCTTTTTATATTC +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQVTLGF*RSLFIF
Trigger: GAATATAAAAAGGCTTCTGCAGAACCCCAAAGTGAC...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACCACAGAACCCAAAGCTaGTCTCCAACACCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYHRTQS*SPTPLF
Trigger: AAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTG...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACATCACACGCGGTATTTaGGAAACAGTGGTCGAGATT +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYITRGI*ETVVEI
Trigger: AATCTCGACCACTGTTTCGCAAATACCGCGTGTGAT...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS-3UTR CCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACGAGCCTCTTCATAGGTaGCTCCTCCAATTACAAACA +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYEPLHR*LLQLQT
Trigger: TGTTTGTAATTGGAGGAGCCACCTATGAAGAGGCTC...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGAGCCTCTTCATAGGTaGCTCCTCCAATTACAAACA +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMEPLHR*LLQLQT
Trigger: TGTTTGTAATTGGAGGAGCCACCTATGAAGAGGCTC...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTATTGTTAGGACAACTCTaGGAGTCTTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLLLGQL*ESCVCA
Trigger: GGCACAGACACAAGACTCCCAGAGTTGTCCTAACAA...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCGGAAGCCAAGGAGTGTaGTATGTACATCAAATGATT +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGGSQGV*YVHQMI
Trigger: AATCATTTGATGTACATACCACACTCCTTGGCTTCC...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTAGTTGTGCAGGAATGTaGTTAATGAAAAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCSCAGM*LMKSRK
Trigger: CTTTCTGCTTTTCATTAACCACATTCCTGCACAACT...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACGTTGTTCTAGATAGCTaGGCTGGATCCCAATTTCGA +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYVVLDS*AGSQFR
Trigger: TCGAAATTGGGATCCAGCCCAGCTATCTAGAACAAC...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGCAAAAACCACGTTCATaGCGGCGAATTGACAAGTAC +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMQKPRS*RRIDKY
Trigger: GTACTTGTCAATTCGCCGCCATGAACGTGGTTTTTG...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR TCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTATGATCTCTCGATTTTaGGAATCAATGCGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSMISRF*ESMRSK
Trigger: CTTTGAACGCATTGATTCTCAAAATCGAGAGATCAT...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491789.2
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTCTCTTAAGTCTTTACTaGTTCCCGGCACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LREEKGSQGVWYVHQMITLLSLY*FPALWK
Trigger: TTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAG...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CAAACACTCCAATCTAGATCTTCTGATTCTAGTTTGGTGCTCTTTCTAGTAGACCTCTTAAGTCTTTACTaGTTCCCGGCACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: QTLQSRSSDSSLVLFLVDLLSLY*FPALWK
Trigger: TTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAG...GTCTACTAGAAAGAGCACCAAACTAGAATCAGAAGATCTAGATTGGAGTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR TCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACCACTGTCACATGCTTTaGAACAGTCCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYHCHML*NSPRHF
Trigger: AAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTG...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CAAATAATGAAACTGGCTCAGAGATTAAGTCAACAGCTCCATGTCACAAAGCCTCACTGTCACATGCTTTaGAACAGTCCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: QIMKLAQRLSQQLHVTKPHCHML*NSPRHF
Trigger: AAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTG...AGGCTTTGTGACATGGAGCTGTTGACTTAATCTCTGAGCCAGTTTCATTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR TCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTACTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLLEWSF*QASSCS
Trigger: TGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAG...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CAAACACTCCAATCTAGATCTTCTGATTCTAGTTTGGTGCTCTTTCTAGTAGACCTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: QTLQSRSSDSSLVLFLVDLEWSF*QASSCS
Trigger: TGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAG...GTCTACTAGAAAGAGCACCAAACTAGAATCAGAAGATCTAGATTGGAGTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR TCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTACTTCCTTTGATGAGATaGTCCAGGGTTTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLLPLMR*SRVSCR
Trigger: CCTACATGAAACCCTGGATCATCTCATCAAAGGAAG...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAATGGGCTACCTGGAGATaGGTTCTAACAACCAGCACA +
Preference number: 4 (lower is better)
Translates to: FHKMDFYCGHTWFLSATEWATWR*VLTTST
Trigger: TGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCA...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAAGGTATGTACATCAAATaGTTACTTTTTAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQGMYIK*LLFKPL
Trigger: GAGGGGCTTAAAAAGTAATCATTTGATGTACATACC...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTGGTATGTACATCAAATaGTTACTTTTTAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSGMYIK*LLFKPL
Trigger: GAGGGGCTTAAAAAGTAATCATTTGATGTACATACC...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR TCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCGGTATGTACATCAAATaGTTACTTTTTAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGGMYIK*LLFKPL
Trigger: GAGGGGCTTAAAAAGTAATCATTTGATGTACATACC...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTCCGATTGTTGTTTATaGCTAGTAGTTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYSDCCL*LVVRGP
Trigger: TGGTCCACGAACTACTAGGCATAAACAACAATCGGA...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGACTGGCAGGCTATTGCTaGTGTGTCGCTCATAATGTA +
Preference number: 4 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRLAGYC*CVAHNV
Trigger: TACATTATGAGCGACACAGCAGCAATAGCCTGCCAG...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGACCATATTCAACAACTaGAGACACGAGCTTTCGATA +
Preference number: 4 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLTIFNN*RHELSI
Trigger: TATCGAAAGCTCGTGTCTGCAGTTGTTGAATATGGT...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTCACAGAACCCAAAGCTaGTCTCCAACACCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LREEKGSQGVWYVHQMITHRTQS*SPTPLF
Trigger: AAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTG...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp ATGAAACTGGCTCAGAGATTAAGTCAACAGCTCCATGTCACAAAGCCTGTAAGTCTTACACATAGTAGGTaGTCATCAAATTGGACTGAC +
Preference number: 4 (lower is better)
Translates to: MKLAQRLSQQLHVTKPVSLTHSR*SSNWTD
Trigger: GTCAGTCCAATTTGATGAGCACCTACTATGTGTAAG...ACTTACAGGCTTTGTGACATGGAGCTGTTGACTTAATCTCTGAGCCAGTTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCAGCCTTTTTATATTCTaGAGAGCACTAGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGSLFIF*RALEWS
Trigger: TGACCATTCTAGTGCTCTCCAGAATATAAAAAGGCT...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTACAAACTCTGTCACTTTaGGGTTCTGCAGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLQTLSL*GSAEAF
Trigger: AAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTG...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGATCCTCACTCCAGGAGTaGTGCGGTTCAGGTTATAAA +
Preference number: 4 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRSSLQE*CGSGYK
Trigger: TTTATAACCTGAACCGCACCACTCCTGGAGTGAGGA...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGGGAAGCCAAGGAGTGTaGTATGTACATCAAATGATT +
Preference number: 4 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLGSQGV*YVHQMI
Trigger: AATCATTTGATGTACATACCACACTCCTTGGCTTCC...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAAAGTTGTGCAGGAATGTaGTTAATGAAAAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQSCAGM*LMKSRK
Trigger: CTTTCTGCTTTTCATTAACCACATTCCTGCACAACT...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGAGAGGGAAAACAAATGTaGGTTCACAGCAATGTAATC +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGEGKQM*VHSNVI
Trigger: GATTACATTGCTGTGAACCCACATTTGTTTTCCCTC...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTTCCCAATTTCGACCCTaGCAGCAACCCAAAATATTG +
Preference number: 4 (lower is better)
Translates to: LREEKGSQGVWYVHQMITSQFRP*QQPKIL
Trigger: CAATATTTTGGGTTGCTGCCAGGGTCGAAATTGGGA...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CCTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGGTTGTTCTAGATAGCTaGGCTGGATCCCAATTTCGA +
Preference number: 4 (lower is better)
Translates to: PFTKWIFIVVIHGFSVPQVVLDS*AGSQFR
Trigger: TCGAAATTGGGATCCAGCCCAGCTATCTAGAACAAC...CTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTAATGATCTCTCGATTTTaGGAATCAATGCGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLMISRF*ESMRSK
Trigger: CTTTGAACGCATTGATTCTCAAAATCGAGAGATCAT...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGAATGATCTCTCGATTTTaGGAATCAATGCGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGMISRF*ESMRSK
Trigger: CTTTGAACGCATTGATTCTCAAAATCGAGAGATCAT...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTGATGAGAGCTGATAACGAATCATGGGACACTTCTTCAGAGATAAAAGGAGAGATGATCTCTCGATTTTaGGAATCAATGCGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LMRADNESWDTSSEIKGEMISRF*ESMRSK
Trigger: CTTTGAACGCATTGATTCTCAAAATCGAGAGATCAT...CTCTCCTTTTATCTCTGAAGAAGTGTCCCATGATTCGTTATCAGCTCTCATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR TCA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAAATCAGCTTCAGCCAATaGCTTCACGTCACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: FHKMDFYCGHTWFLSATEISFSQ*LHVTLA
Trigger: AGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGAT...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535106.5
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTCCCAGACATTTTCTTaGACTGTGGATAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLSQTFS*TVDNSQ
Trigger: TTGAGAATTATCCACAGTTCAAGAAAATGTCTGGGA...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGACTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRLEWSF*QASSCS
Trigger: TGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAG...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTGTAGGTTTTCAGAAATaGGTTGTGCAGGAATGTGGT +
Preference number: 4 (lower is better)
Translates to: LREEKGSQGVWYVHQMITVGFQK*VVQECG
Trigger: ACCACATTCCTGCACAACTCATTTCTGAAAACCTAC...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAGTAGGTTTTCAGAAATaGGTTGTGCAGGAATGTGGT +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLVGFQK*VVQECG
Trigger: ACCACATTCCTGCACAACTCATTTCTGAAAACCTAC...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCGATTTTGAGAATCAATaGGTTCAAAGAGGTACACTT +
Preference number: 4 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGDFENQ*VQRGTL
Trigger: AAGTGTACCTCTTTGAACGCATTGATTCTCAAAATC...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTATCCGATTGTTGTTTATaGCTAGTAGTTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLSDCCL*LVVRGP
Trigger: TGGTCCACGAACTACTAGGCATAAACAACAATCGGA...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp CACAAAGCCTGTAAGTGGTATACCAAACACTCCAATCTAGATCTTCTGATTCTATCCGATTGTTGTTTATaGCTAGTAGTTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: HKACKWYTKHSNLDLLILSDCCL*LVVRGP
Trigger: TGGTCCACGAACTACTAGGCATAAACAACAATCGGA...TAGAATCAGAAGATCTAGATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CCA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGAAGTTGTGCAGGAATGTaGTTAATGAAAAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGSCAGM*LMKSRK
Trigger: CTTTCTGCTTTTCATTAACCACATTCCTGCACAACT...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CTGATGAGAGCTGATAACGAATCATGGGACACTTCTTCAGAGATAAAAGGAGAGAGTTGTGCAGGAATGTaGTTAATGAAAAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LMRADNESWDTSSEIKGESCAGM*LMKSRK
Trigger: CTTTCTGCTTTTCATTAACCACATTCCTGCACAACT...CTCTCCTTTTATCTCTGAAGAAGTGTCCCATGATTCGTTATCAGCTCTCATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR TCA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAATTAGTTATCACTTGCTaGACCTCAGCCACAACTTCC +
Preference number: 4 (lower is better)
Translates to: FHKMDFYCGHTWFLSATELVITC*TSATTS
Trigger: GGAAGTTGTGGCTGAGGTTCAGCAAGTGATAACTAA...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS-3UTR TCA 90 bp CAAATAATGAAACTGGCTCAGAGATTAAGTCAACAGCTCCATGTCACAAAGCCTTCCCAGACATTTTCTTaGACTGTGGATAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: QIMKLAQRLSQQLHVTKPSQTFS*TVDNSQ
Trigger: TTGAGAATTATCCACAGTTCAAGAAAATGTCTGGGA...AGGCTTTGTGACATGGAGCTGTTGACTTAATCTCTGAGCCAGTTTCATTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR TCA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAAAACACAATGATATCCTaGGGTCTGTCTCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: FHKMDFYCGHTWFLSATENTMIS*GLSLSV
Trigger: CACACTCAGAGACAGACCTCAGGATATCATTGTGTT...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACGGTATGTACATCAAATaGTTACTTTTTAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYGMYIK*LLFKPL
Trigger: GAGGGGCTTAAAAAGTAATCATTTGATGTACATACC...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTAGATTTTGAGAATCAATaGGTTCAAAGAGGTACACTT +
Preference number: 4 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLDFENQ*VQRGTL
Trigger: AAGTGTACCTCTTTGAACGCATTGATTCTCAAAATC...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAGTCACTTTGGGGTTCTaGAGAAGCCTTTTTATATTC +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLVTLGF*RSLFIF
Trigger: GAATATAAAAAGGCTTCTGCAGAACCCCAAAGTGAC...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAACCATATTCAACAACTaGAGACACGAGCTTTCGATA +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLTIFNN*RHELSI
Trigger: TATCGAAAGCTCGTGTCTGCAGTTGTTGAATATGGT...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACAGTTGTGCAGGAATGTaGTTAATGAAAAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYSCAGM*LMKSRK
Trigger: CTTTCTGCTTTTCATTAACCACATTCCTGCACAACT...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CACAAAGCCTGTAAGTGGTATACCAAACACTCCAATCTAGATCTTCTGATTCTACACAAAGCCTGTAAGTaGTATACCAAACACTCCAAT +
Preference number: 4 (lower is better)
Translates to: HKACKWYTKHSNLDLLILHKACK*YTKHSN
Trigger: ATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTG...TAGAATCAGAAGATCTAGATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
3UTR CAA 72 bp ACAAATTGCCTTCAGGTGTTTCATGATCTCTCGATTTaGAGAATCAATGCGTTCAAAGAGGTACACTTCCTT +
Preference number: 4 (lower is better)
Translates to: TNCLQVFHDLSI*RINAFKEVHFL
Trigger: AAGGAAGTGTACCTCTTTGAACGCATTGATTCTCAAAATCGAGAGATCATGAAACACCTGAAGGCAATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR TCA 90 bp CCTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGATGATCTCTCGATTTTaGGAATCAATGCGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PFTKWIFIVVIHGFSVPQMISRF*ESMRSK
Trigger: CTTTGAACGCATTGATTCTCAAAATCGAGAGATCAT...CTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535106.5
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTATGATCTCTCGATTTTaGGAATCAATGCGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LREEKGSQGVWYVHQMITMISRF*ESMRSK
Trigger: CTTTGAACGCATTGATTCTCAAAATCGAGAGATCAT...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAACACTGTCACATGCTTTaGAACAGTCCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: FHKMDFYCGHTWFLSATEHCHML*NSPRHF
Trigger: AAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTG...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR TCA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTATGGTACAGTTCTTATaGGCATTTACTGCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LREEKGSQGVWYVHQMITMVQFL*AFTAGK
Trigger: TTTTCCTGCAGTAAATGCTCATAAGAACTGTACCAT...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491789.2
CDS-3UTR TCA 90 bp CAAACACTCCAATCTAGATCTTCTGATTCTAGTTTGGTGCTCTTTCTAGTAGACCTTATACTAATTAACTaGACCCTTGGGAATTGCACA +
Preference number: 4 (lower is better)
Translates to: QTLQSRSSDSSLVLFLVDLILIN*TLGNCT
Trigger: TGTGCAATTCCCAAGGGTTCAGTTAATTAGTATAAG...GTCTACTAGAAAGAGCACCAAACTAGAATCAGAAGATCTAGATTGGAGTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR GCA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGATTTTGAGAATCAATaGGTTCAAAGAGGTACACTT +
Preference number: 4 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMDFENQ*VQRGTL
Trigger: AAGTGTACCTCTTTGAACGCATTGATTCTCAAAATC...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAAGTTGTGCAGGAATGTaGTTAATGAAAAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLSCAGM*LMKSRK
Trigger: CTTTCTGCTTTTCATTAACCACATTCCTGCACAACT...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAGCTGATAACGAATCATaGGACACTTCTTCAGAGATA +
Preference number: 4 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRADNES*DTSSEI
Trigger: TATCTCTGAAGAAGTGTCCCATGATTCGTTATCAGC...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CACAAAGCCTGTAAGTGGTATACCAAACACTCCAATCTAGATCTTCTGATTCTAATGTCAGCTCCTTGTTaGACTAAATTCCATGTTGAT +
Preference number: 4 (lower is better)
Translates to: HKACKWYTKHSNLDLLILMSAPC*TKFHVD
Trigger: ATCAACATGGAATTTAGTCCAACAAGGAGCTGACAT...TAGAATCAGAAGATCTAGATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR GCA 90 bp CCTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGGATTTTGAGAATCAATaGGTTCAAAGAGGTACACTT +
Preference number: 4 (lower is better)
Translates to: PFTKWIFIVVIHGFSVPQDFENQ*VQRGTL
Trigger: AAGTGTACCTCTTTGAACGCATTGATTCTCAAAATC...CTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535106.5
ENST00000644510.2
ENST00000644526.1
CDS-3UTR GCA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAAGTCACTTTGGGGTTCTaGAGAAGCCTTTTTATATTC +
Preference number: 4 (lower is better)
Translates to: FHKMDFYCGHTWFLSATEVTLGF*RSLFIF
Trigger: GAATATAAAAAGGCTTCTGCAGAACCCCAAAGTGAC...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CCA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAAGCCTTTTTATATTCTaGAGAGCACTAGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRSLFIF*RALEWS
Trigger: TGACCATTCTAGTGCTCTCCAGAATATAAAAAGGCT...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS GCA 90 bp ACGGCCTGGGCCGCTGCCACGCGCGGGCGTTATTCTCCACCCACCTaGGGCCTGAAGATGCCTGAGGCCCGGACTCTCAGACCCCTATTG +
Preference number: 5 (lower is better)
Translates to: TAWAAATRGRYSPPT*GLKMPEARTLRPLL
Trigger: CAATAGGGGTCTGAGAGTCCGGGCCTCAGGCATCTTCAGGCCGCAGGTGGGTGGAGAATAACGCCCGCGCGTGGCAGCGGCCCAGGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS TCA 90 bp GGGCCGCTGCCACGCGCGGGCGTTATTCTCCACCCACCTGCGGCCTaGAGATGCCTGAGGCCCGGACTCTCAGACCCCTATTGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: GPLPRAGVILHPPAA*RCLRPGLSDPYCPL
Trigger: CAAAGGGCAATAGGGGTCTGAGAGTCCGGGCCTCAGGCATCTTCAGGCCGCAGGTGGGTGGAGAATAACGCCCGCGCGTGGCAGCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS TCA 90 bp CACGCGCGGGCGTTATTCTCCACCCACCTGCGGCCTGAAGATGCCTaGGGCCCGGACTCTCAGACCCCTATTGCCCTTTGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: HARALFSTHLRPEDA*GPDSQTPIALWCWR
Trigger: CCTCCAGCACCAAAGGGCAATAGGGGTCTGAGAGTCCGGGCCTCAGGCATCTTCAGGCCGCAGGTGGGTGGAGAATAACGCCCGCGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS TCA 90 bp CGTGCCCTATTTGCCATTAACGCTTTCTTGCATGGCAGTGAGAGATaGGGGCAAGGGAGGTGGCATAATGCTCCCGGCCGCTTGGGACTC +
Preference number: 5 (lower is better)
Translates to: RALFAINAFLHGSER*GQGRWHNAPGRLGL
Trigger: GAGTCCCAAGCGGCCGGGAGCATTATGCCACCTCCCTTGCCCTCATCTCTCACTGCCATGCAAGAAAGCGTTAATGGCAAATAGGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462852.5
ENST00000535106.5
ENST00000643970.1
CDS CCA 90 bp GAGAGTGGAGCCTCGCGAAATGAGGAACCTGGCACAAGGTTTGCTTaGAAGCAGGAACGACGGAGTGTGGCTACGTGCCCTATTTGCCAT +
Preference number: 5 (lower is better)
Translates to: ESGASRNEEPGTRFA*KQERRSVATCPICH
Trigger: ATGGCAAATAGGGCACGTAGCCACACTCCGTCGTTCCTGCTTCCAAGCAAACCTTGTGCCAGGTTCCTCATTTCGCGAGGCTCCACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369128.9
ENST00000462852.5
ENST00000478999.1
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGAATGCTCCCGGCCGCTaGGGACTCGGAGAGACGGCA +
Preference number: 5 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWNAPGR*GLGETA
Trigger: TGCCGTCTCTCCGAGTCCCAAGCGGCCGGGAGCATT...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535106.5
ENST00000643970.1
CDS CCA 90 bp GTGAGAGATGAGGGCAAGGGAGGTGGCATAATGCTCCCGGCCGCTTaGGACTCGGAGAGACGGCATTTAATAAATCACACGCGGTATTTG +
Preference number: 5 (lower is better)
Translates to: VRDEGKGGGIMLPAA*DSERRHLINHTRYL
Trigger: CAAATACCGCGTGTGATTTATTAAATGCCGTCTCTCCGAGTCCCAAGCGGCCGGGAGCATTATGCCACCTCCCTTGCCCTCATCTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp AACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAACCTTAACCCCCAGTCTGTaGGCCGGGTCTCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: NHVSVGYLEMSSNNQHRTLTPSL*AGSQLL
Trigger: AAGCAGCTGAGACCCGGCCAACAGACTGGGGGTTAA...GGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611412.4
CDS-3UTR CAA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACGTTCATGGCGGCGAATaGACAAGTACCCTACAGCCC +
Preference number: 5 (lower is better)
Translates to: LGQLWESCVCANHVSVGYVHGGE*TSTLQP
Trigger: GGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAAC...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR CAA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAAATGCTCCCGGCCGCTaGGGACTCGGAGAGACGGCA +
Preference number: 5 (lower is better)
Translates to: SDLLLGQLWESCVCANHVNAPGR*GLGETA
Trigger: TGCCGTCTCTCCGAGTCCCAAGCGGCCGGGAGCATT...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp TGTGGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAATAGCCACAGCATCTTaGGGGCTGAAGAGGTCACTT +
Preference number: 5 (lower is better)
Translates to: CGASQDNPHSRSGAVQVIIATAS*GLKRSL
Trigger: AAGTGACCTCTTCAGCCCCAAAGATGCTGTGGCTAT...TATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS CCA 90 bp AGGAACCTGGCACAAGGTTTGCTTGGAAGCAGGAACGACGGAGTGTaGCTACGTGCCCTATTTGCCATTAACGCTTTCTTGCATGGCAGT +
Preference number: 5 (lower is better)
Translates to: RNLAQGLLGSRNDGV*LRALFAINAFLHGS
Trigger: ACTGCCATGCAAGAAAGCGTTAATGGCAAATAGGGCACGTAGCCACACTCCGTCGTTCCTGCTTCCAAGCAAACCTTGTGCCAGGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369128.9
ENST00000462852.5
ENST00000478999.1
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGAGACCCCTATTGCCCTTaGGTGCTGGAGGCCCAGCGG +
Preference number: 5 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGDPYCP*VLEAQR
Trigger: CCGCTGGGCCTCCAGCACCAAAGGGCAATAGGGGTC...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp TGTGGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATATCAAACTCTGTCACTTaGGGGTTCTGCAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: CGASQDNPHSRSGAVQVISNSVT*GFCRSL
Trigger: AAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGA...TATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CAA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATCAAACTCTGTCACTTaGGGGTTCTGCAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRSNSVT*GFCRSL
Trigger: AAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGA...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAATAGCCACAGCATCTTaGGGGCTGAAGAGGTCACTT +
Preference number: 5 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRIATAS*GLKRSL
Trigger: AAGTGACCTCTTCAGCCCCAAAGATGCTGTGGCTAT...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp GCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGGTTCATGGCGGCGAATaGACAAGTACCCTACAGCCC +
Preference number: 5 (lower is better)
Translates to: AVQKPELPLGNFSCCALWVHGGE*TSTLQP
Trigger: GGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAAC...CCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CAA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACTGGCACAAGGTTTGCTaGGAAGCAGGAACGACGGAG +
Preference number: 5 (lower is better)
Translates to: MGSDLLLGQLWESCVCANWHKVC*EAGTTE
Trigger: CTCCGTCGTTCCTGCTTCCAAGCAAACCTTGTGCCA...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGACCCCTATTGCCCTTaGGTGCTGGAGGCCCAGCGG +
Preference number: 5 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMDPYCP*VLEAQR
Trigger: CCGCTGGGCCTCCAGCACCAAAGGGCAATAGGGGTC...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCAGTCCTTTGAGGAATaGTTTGGTGATAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: LGQLWESCVCANHVSVGYQSFEE*FGDSHS
Trigger: GCTGTGGCTATCACCAAACAATTCCTCAAAGGACTG...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGACAGTCCTTTGAGGAATaGTTTGGTGATAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRQSFEE*FGDSHS
Trigger: GCTGTGGCTATCACCAAACAATTCCTCAAAGGACTG...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGCCATCTCTTTTCGTGTaGTGCACTGTGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWPSLFV*CTVVPP
Trigger: GGGAGGCACCACAGTGCACAACACGAAAAGAGATGG...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000644526.1
CDS-3UTR CAA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTTAACCCCCAGTCTGTaGGCCGGGTCTCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQLTPSL*AGSQLL
Trigger: AAGCAGCTGAGACCCGGCCAACAGACTGGGGGTTAA...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535106.5
ENST00000611412.4
CDS-3UTR CAA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATGGCACAAGGTTTGCTaGGAAGCAGGAACGACGGAG +
Preference number: 5 (lower is better)
Translates to: SDLLLGQLWESCVCANHVWHKVC*EAGTTE
Trigger: CTCCGTCGTTCCTGCTTCCAAGCAAACCTTGTGCCA...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTTGGCACAAGGTTTGCTaGGAAGCAGGAACGACGGAG +
Preference number: 5 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCWHKVC*EAGTTE
Trigger: CTCCGTCGTTCCTGCTTCCAAGCAAACCTTGTGCCA...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTACTCTCAGACCCCTATaGCCCTTTGGTGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSTLRPL*PFGAGG
Trigger: GCCTCCAGCACCAAAGGGCAATAGGGGTCTGAGAGT...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643970.1
CDS-3UTR CAA 90 bp GCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGACCACTGTCACATGCTTaGAAACAGTCCCAGACATTT +
Preference number: 5 (lower is better)
Translates to: ANHVSVGYLEMSSNNQHRPLSHA*KQSQTF
Trigger: AAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGG...TCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp GGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAAACTGTTAGAGCCTCCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 5 (lower is better)
Translates to: GQSSLQEWCGSGYKLLEPPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...AGGCTCTAACAGTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CAA 90 bp AACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGACAGCAACCCAAAATATaGAGGGAAAACAAATGTGGG +
Preference number: 5 (lower is better)
Translates to: NSGSLVSVPTTYPWATWRQQPKI*RENKCG
Trigger: CCCACATTTGTTTTCCCTCAATATTTTGGGTTGCTG...TCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTTCATGGCGGCGAATaGACAAGTACCCTACAGCCC +
Preference number: 5 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCVHGGE*TSTLQP
Trigger: GGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAAC...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR CAA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCAGGAAACTTTTCGTGTaGTGCACTGTGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTRKLFV*CTVVPP
Trigger: GGGAGGCACCACAGTGCACAACACGAAAAGTTTCCT...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACAGGAAACTTTTCGTGTaGTGCACTGTGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: MGSDLLLGQLWESCVCANRKLFV*CTVVPP
Trigger: GGGAGGCACCACAGTGCACAACACGAAAAGTTTCCT...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTGGCTACGTGCCCTATTaGCCATTAACGCTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRGYVPY*PLTLSC
Trigger: GCAAGAAAGCGTTAATGGCAAATAGGGCACGTAGCC...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGACTCTCAGACCCCTATaGCCCTTTGGTGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLTLRPL*PFGAGG
Trigger: GCCTCCAGCACCAAAGGGCAATAGGGGTCTGAGAGT...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACGACTTCACGTCACTCTaGCTGATCACATTACTGAAA +
Preference number: 5 (lower is better)
Translates to: LGQLWESCVCANHVSVGYDFTSL*LITLLK
Trigger: TTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTC...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491789.2
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACTTCTTTAGTTATCACTaGCTGAACCTCAGCCACAAC +
Preference number: 5 (lower is better)
Translates to: LGQLWESCVCANHVSVGYFFSYH*LNLSHN
Trigger: GTTGTGGCTGAGGTTCAGCAAGTGATAACTAAAGAA...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491789.2
CDS-3UTR CAA 90 bp AGAACTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACATCAAACTCTGTCACTTaGGGGTTCTGCAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: RTSSRKLFVLCTVVPPRTSNSVT*GFCRSL
Trigger: AAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGA...TGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CAA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGATAGCCACAGCATCTTaGGGGCTGAAGAGGTCACTT +
Preference number: 5 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWIATAS*GLKRSL
Trigger: AAGTGACCTCTTCAGCCCCAAAGATGCTGTGGCTAT...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCCCATCTCTTTTCGTGTaGTGCACTGTGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGPSLFV*CTVVPP
Trigger: GGGAGGCACCACAGTGCACAACACGAAAAGAGATGG...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000644526.1
CDS-3UTR CAA 90 bp CTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACAATCCTGCTCTCCAACACCTTaGTTTAGTAGGGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: LPLGNFSCCALWCLPGQSCSPTP*FSRENL
Trigger: CAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCA...GGATTGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CAA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGCCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 5 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCCCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 5 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 5 (lower is better)
Translates to: MGSDLLLGQLWESCVCANPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS TCA 90 bp GCTCATCAAATTGGACTGACCTGGAGAGCACTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCAACCTCTGAAACCTCCAGCAGATTC +
Preference number: 5 (lower is better)
Translates to: AHQIGLTWRALEWSF*QASSCSTSETSSRF
Trigger: GAATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGTGCTCTCCAGGTCAGTCCAATTTGATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CAA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGGCTACGTGCCCTATTaGCCATTAACGCTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCGYVPY*PLTLSC
Trigger: GCAAGAAAGCGTTAATGGCAAATAGGGCACGTAGCC...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAAAACCTGGCACAAGGTTaGCTTGGAAGCAGGAACGAC +
Preference number: 5 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQNLAQG*LGSRND
Trigger: GTCGTTCCTGCTTCCAAGCAAACCTTGTGCCAGGTT...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGACTCTCAGACCCCTATaGCCCTTTGGTGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMTLRPL*PFGAGG
Trigger: GCCTCCAGCACCAAAGGGCAATAGGGGTCTGAGAGT...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp GGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATAAACCATGATCTCTCGATTTaGAGAATCAATGCGTTCAAA +
Preference number: 5 (lower is better)
Translates to: GASQDNPHSRSGAVQVINHDLSI*RINAFK
Trigger: TTTGAACGCATTGATTCTCAAAATCGAGAGATCATG...GTTTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CAA 90 bp TTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACAGATCAATCCGATTGTaGTTTATGCCTAGTAGTTCG +
Preference number: 5 (lower is better)
Translates to: LGQLWESCVCANHVSVGYRSIRL*FMPSSS
Trigger: CGAACTACTAGGCATAAACAACAATCGGATTGATCT...GTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp TGTGGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGGTGCGGTTCAGGTTATACCTTCATGTCTGCTATaGATTCTAGTTTTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: CGASQDNPHSRSGAVQVIPSCLL*ILVFAV
Trigger: AACAGCAAAAACTAGAATCAATAGCAGACATGAAGG...TATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CAA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTTCAAACTCTGTCACTTaGGGGTTCTGCAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRSNSVT*GFCRSL
Trigger: AAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGA...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCTCAAACTCTGTCACTTaGGGGTTCTGCAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: DLLLGQLWESCVCANHVSSNSVT*GFCRSL
Trigger: AAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGA...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCAGTCCTTTGAGGAATaGTTTGGTGATAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: MGSDLLLGQLWESCVCANQSFEE*FGDSHS
Trigger: GCTGTGGCTATCACCAAACAATTCCTCAAAGGACTG...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTCCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 5 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTACCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 5 (lower is better)
Translates to: SDLLLGQLWESCVCANHVPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGGTTCATGGCGGCGAATaGACAAGTACCCTACAGCCC +
Preference number: 5 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLVHGGE*TSTLQP
Trigger: GGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAAC...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS-3UTR CAA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAAAGGAAACTTTTCGTGTaGTGCACTGTGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQRKLFV*CTVVPP
Trigger: GGGAGGCACCACAGTGCACAACACGAAAAGTTTCCT...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTAAACCTGGCACAAGGTTaGCTTGGAAGCAGGAACGAC +
Preference number: 5 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLNLAQG*LGSRND
Trigger: GTCGTTCCTGCTTCCAAGCAAACCTTGTGCCAGGTT...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp AACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTAACAACCAGCACAGAACCAGATCAATCCGATTGTaGTTTATGCCTAGTAGTTCG +
Preference number: 5 (lower is better)
Translates to: NHVSVGYLEMSSNNQHRTRSIRL*FMPSSS
Trigger: CGAACTACTAGGCATAAACAACAATCGGATTGATCT...GGTTCTGTGCTGGTTGTTAGAACTCATCTCCAGGTAGCCCACGGATACGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp GAGTCTTGTGTCTGTGCCAACCACGTATCCGTGGGCTACCTGGAGATGAGTTCTCCTTCATGTCTGCTATaGATTCTAGTTTTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: ESCVCANHVSVGYLEMSSPSCLL*ILVFAV
Trigger: AACAGCAAAAACTAGAATCAATAGCAGACATGAAGG...AGAACTCATCTCCAGGTAGCCCACGGATACGTGGTTGGCACAGACACAAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTACTAGAATGGTCATTTaGACAGGCCAGTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRTRMVI*TGQFLL
Trigger: GAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGT...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCACTAGAATGGTCATTTaGACAGGCCAGTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: DLLLGQLWESCVCANHVSTRMVI*TGQFLL
Trigger: GAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGT...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTATAGCCACAGCATCTTaGGGGCTGAAGAGGTCACTT +
Preference number: 5 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSIATAS*GLKRSL
Trigger: AAGTGACCTCTTCAGCCCCAAAGATGCTGTGGCTAT...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTCCTTTGAGGAATTGTTaGGTGATAGCCACAGCATCT +
Preference number: 5 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRPLRNC*VIATAS
Trigger: AGATGCTGTGGCTATCACCAAACAATTCCTCAAAGG...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCCTTTGAGGAATTGTTaGGTGATAGCCACAGCATCT +
Preference number: 5 (lower is better)
Translates to: MGSDLLLGQLWESCVCANPLRNC*VIATAS
Trigger: AGATGCTGTGGCTATCACCAAACAATTCCTCAAAGG...GTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTCAGTCCTTTGAGGAATaGTTTGGTGATAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCQSFEE*FGDSHS
Trigger: GCTGTGGCTATCACCAAACAATTCCTCAAAGGACTG...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCAGTCCTTTGAGGAATaGTTTGGTGATAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: NQHRTQSCSPTPLFSRENQSFEE*FGDSHS
Trigger: GCTGTGGCTATCACCAAACAATTCCTCAAAGGACTG...GTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGCAGTCCTTTGAGGAATaGTTTGGTGATAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQQSFEE*FGDSHS
Trigger: GCTGTGGCTATCACCAAACAATTCCTCAAAGGACTG...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTTGCTCTCCAACACCTTaGTTTAGTAGGGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRCSPTP*FSRENL
Trigger: CAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCA...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGTGCTCTCCAACACCTTaGTTTAGTAGGGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWCSPTP*FSRENL
Trigger: CAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCA...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGCTCTCCAACACCTTaGTTTAGTAGGGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTCSPTP*FSRENL
Trigger: CAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCA...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCCCGGAGAAAAGTGGGTaGAGATGGGCTCAGACTTAT +
Preference number: 5 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGPEKSG*RWAQTY
Trigger: ATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGG...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGTTCATGGCGGCGAATaGACAAGTACCCTACAGCCC +
Preference number: 5 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMVHGGE*TSTLQP
Trigger: GGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAAC...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
CDS TCA 90 bp AAAGGGCCAACATACGAGATGTGTTACAGGACCAATATGTTTACCTaGACCTCAGCCACAACTTCCTGTTCATCAGCTTCAGCCAATGAC +
Preference number: 5 (lower is better)
Translates to: KGPTYEMCYRTNMFT*TSATTSCSSASAND
Trigger: GTCATTGGCTGAAGCTGATGAACAGGAAGTTGTGGCTGAGGTTCAGGTAAACATATTGGTCCTGTAACACATCTCGTATGTTGGCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497638.2
CDS GCA 90 bp ATCAGAGTGTTCTGCATCTGCCTGGGCAGATGGAAGCTCAGTTTATaGAGTACCTTTGTAGGTCGAAGAAAACAAATTGCCTTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: IRVFCICLGRWKLSL*STFVGRRKQIAFRC
Trigger: ACACCTGAAGGCAATTTGTTTTCTTCGACCTACAAAGGTACTGCATAAACTGAGCTTCCATCTGCCCAGGCAGATGCAGAACACTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478999.1
ENST00000643611.1
CDS-3UTR CAA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGACTTCACGTCACTCTaGCTGATCACATTACTGAAA +
Preference number: 5 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWDFTSL*LITLLK
Trigger: TTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTC...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGACTTCACGTCACTCTaGCTGATCACATTACTGAAA +
Preference number: 5 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRDFTSL*LITLLK
Trigger: TTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTC...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGACTTCACGTCACTCTaGCTGATCACATTACTGAAA +
Preference number: 5 (lower is better)
Translates to: DLLLGQLWESCVCANHVSDFTSL*LITLLK
Trigger: TTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTC...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCTTCTTTAGTTATCACTaGCTGAACCTCAGCCACAAC +
Preference number: 5 (lower is better)
Translates to: DLLLGQLWESCVCANHVSFFSYH*LNLSHN
Trigger: GTTGTGGCTGAGGTTCAGCAAGTGATAACTAAAGAA...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
CDS-3UTR CAA 90 bp CCTTGCTTCGGCTGTGCAGTCCAGAAGCCAGAACTTCCTCTAGGAAACTTTTCGGAAAGATCAATCCGATaGTTGTTTATGCCTAGTAGT +
Preference number: 5 (lower is better)
Translates to: PCFGCAVQKPELPLGNFSERSIR*LFMPSS
Trigger: ACTACTAGGCATAAACAACAATCGGATTGATCTTTC...CGAAAAGTTTCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CAA 90 bp CTTCCTCTAGGAAACTTTTCGTGTTGTGCACTGTGGTGCCTCCCAGGACAATCCGAAAGATCAATCCGATaGTTGTTTATGCCTAGTAGT +
Preference number: 5 (lower is better)
Translates to: LPLGNFSCCALWCLPGQSERSIR*LFMPSS
Trigger: ACTACTAGGCATAAACAACAATCGGATTGATCTTTC...GGATTGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTTTCCTAGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491789.2
ENST00000642919.1
CDS-3UTR CAA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGCCACTGTCACATGCTTaGAAACAGTCCCAGACATTT +
Preference number: 5 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQPLSHA*KQSQTF
Trigger: AAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGG...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCCACTGTCACATGCTTaGAAACAGTCCCAGACATTT +
Preference number: 5 (lower is better)
Translates to: NQHRTQSCSPTPLFSRENPLSHA*KQSQTF
Trigger: AAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGG...GTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTCCACTGTCACATGCTTaGAAACAGTCCCAGACATTT +
Preference number: 5 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCPLSHA*KQSQTF
Trigger: AAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGG...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAACTAGAATGGTCATTTaGACAGGCCAGTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: SDLLLGQLWESCVCANHVTRMVI*TGQFLL
Trigger: GAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGT...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGACTAGAATGGTCATTTaGACAGGCCAGTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQTRMVI*TGQFLL
Trigger: GAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGT...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTAATAGCCACAGCATCTTaGGGGCTGAAGAGGTCACTT +
Preference number: 5 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLIATAS*GLKRSL
Trigger: AAGTGACCTCTTCAGCCCCAAAGATGCTGTGGCTAT...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGCCTTTGAGGAATTGTTaGGTGATAGCCACAGCATCT +
Preference number: 5 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQPLRNC*VIATAS
Trigger: AGATGCTGTGGCTATCACCAAACAATTCCTCAAAGG...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTACTCCCTTCAGTCCTTaGAGGAATTGTTTGGTGATA +
Preference number: 5 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRTPFSP*RNCLVI
Trigger: TATCACCAAACAATTCCTCAAAGGACTGAAGGGAGT...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTACCATCTCTTTTCGTGTaGTGCACTGTGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLPSLFV*CTVVPP
Trigger: GGGAGGCACCACAGTGCACAACACGAAAAGAGATGG...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000644526.1
CDS-3UTR CAA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTTGCTCTCCAACACCTTaGTTTAGTAGGGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCCSPTP*FSRENL
Trigger: CAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCA...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGAGGAAACTTTTCGTGTaGTGCACTGTGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMRKLFV*CTVVPP
Trigger: GGGAGGCACCACAGTGCACAACACGAAAAGTTTCCT...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCAATCACACGCGGTATTaGCGAAACAGTGGTCGAGAT +
Preference number: 5 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGNHTRY*RNSGRD
Trigger: ATCTCGACCACTGTTTCGCAAATACCGCGTGTGATT...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535106.5
ENST00000643970.1
CDS-3UTR CAA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATTCTTTAGTTATCACTaGCTGAACCTCAGCCACAAC +
Preference number: 5 (lower is better)
Translates to: SDLLLGQLWESCVCANHVFFSYH*LNLSHN
Trigger: GTTGTGGCTGAGGTTCAGCAAGTGATAACTAAAGAA...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
CDS-3UTR CAA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCAGATCAATCCGATTGTaGTTTATGCCTAGTAGTTCG +
Preference number: 5 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTRSIRL*FMPSSS
Trigger: CGAACTACTAGGCATAAACAACAATCGGATTGATCT...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp GACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCAGATCAATCCGATTGTaGTTTATGCCTAGTAGTTCG +
Preference number: 5 (lower is better)
Translates to: DLLLGQLWESCVCANHVSRSIRL*FMPSSS
Trigger: CGAACTACTAGGCATAAACAACAATCGGATTGATCT...GGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TTGATGAAGAAGGATTACTTGCCTTTTTATCTCTTGCTCTGCCTGGCACAGTGCCCACTGTCACATGCTTaGAAACAGTCCCAGACATTT +
Preference number: 5 (lower is better)
Translates to: LMKKDYLPFYLLLCLAQCPLSHA*KQSQTF
Trigger: AAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGG...GCACTGTGCCAGGCAGAGCAAGAGATAAAAAGGCAAGTAATCCTTCTTCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CAA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGATAGCCACAGCATCTTaGGGGCTGAAGAGGTCACTT +
Preference number: 5 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMIATAS*GLKRSL
Trigger: AAGTGACCTCTTCAGCCCCAAAGATGCTGTGGCTAT...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTCCTTTGAGGAATTGTTaGGTGATAGCCACAGCATCT +
Preference number: 5 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSPLRNC*VIATAS
Trigger: AGATGCTGTGGCTATCACCAAACAATTCCTCAAAGG...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTGCTCTCCAACACCTTaGTTTAGTAGGGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGCSPTP*FSRENL
Trigger: CAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCA...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTCAGCAACCCAAAATATaGAGGGAAAACAAATGTGGG +
Preference number: 5 (lower is better)
Translates to: KWVEMGSDLLLGQLWESCQQPKI*RENKCG
Trigger: CCCACATTTGTTTTCCCTCAATATTTTGGGTTGCTG...ACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTCAGCAACCCAAAATATaGAGGGAAAACAAATGTGGG +
Preference number: 5 (lower is better)
Translates to: VEMGSDLLLGQLWESCVCQQPKI*RENKCG
Trigger: CCCACATTTGTTTTCCCTCAATATTTTGGGTTGCTG...ACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAAGGAAACTTTTCGTGTaGTGCACTGTGGTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLRKLFV*CTVVPP
Trigger: GGGAGGCACCACAGTGCACAACACGAAAAGTTTCCT...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTAAATCACACGCGGTATTaGCGAAACAGTGGTCGAGAT +
Preference number: 5 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLNHTRY*RNSGRD
Trigger: ATCTCGACCACTGTTTCGCAAATACCGCGTGTGATT...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535106.5
ENST00000643970.1
CDS GCA 90 bp ACAATGTTGAGTGGAAACAGTAGGCCCATCCCAAAGCCTTCCAAGTaGTCTGACATATTAATGATTTCTTGGCGGGGACATTTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: TMLSGNSRPIPKPSK*SDILMISWRGHLEK
Trigger: CTTTTCTAAATGTCCCCGCCAAGAAATCATTAATATGTCAGAGCACTTGGAAGGCTTTGGGATGGGCCTACTGTTTCCACTCAACATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647278.1
CDS-3UTR CAA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTCATGATCTCTCGATTTaGAGAATCAATGCGTTCAAA +
Preference number: 5 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRHDLSI*RINAFK
Trigger: TTTGAACGCATTGATTCTCAAAATCGAGAGATCATG...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCGACTTCACGTCACTCTaGCTGATCACATTACTGAAA +
Preference number: 5 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGDFTSL*LITLLK
Trigger: TTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTC...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAAGATCAATCCGATTGTaGTTTATGCCTAGTAGTTCG +
Preference number: 5 (lower is better)
Translates to: SDLLLGQLWESCVCANHVRSIRL*FMPSSS
Trigger: CGAACTACTAGGCATAAACAACAATCGGATTGATCT...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CTCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTGAAAGATCAATCCGATaGTTGTTTATGCCTAGTAGT +
Preference number: 5 (lower is better)
Translates to: LRLIVRTTLGVLCLCQPRERSIR*LFMPSS
Trigger: ACTACTAGGCATAAACAACAATCGGATTGATCTTTC...ACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTGAAAGATCAATCCGATaGTTGTTTATGCCTAGTAGT +
Preference number: 5 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRERSIR*LFMPSS
Trigger: ACTACTAGGCATAAACAACAATCGGATTGATCTTTC...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ACCAGCACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCGAAAGATCAATCCGATaGTTGTTTATGCCTAGTAGT +
Preference number: 5 (lower is better)
Translates to: TSTEPKAALQHLCLVGKTERSIR*LFMPSS
Trigger: ACTACTAGGCATAAACAACAATCGGATTGATCTTTC...GGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp CTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTATCCGTCCTTCATGTCTGCTATaGATTCTAGTTTTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LIVRTTLGVLCLCQPRIRPSCLL*ILVFAV
Trigger: AACAGCAAAAACTAGAATCAATAGCAGACATGAAGG...ACGGATACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACTCTGGCCTTCATGTCTGCTATaGATTCTAGTTTTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: TGEKWVEMGSDLLLGQLWPSCLL*ILVFAV
Trigger: AACAGCAAAAACTAGAATCAATAGCAGACATGAAGG...CCAGAGTTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTACCACTGTCACATGCTTaGAAACAGTCCCAGACATTT +
Preference number: 5 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLPLSHA*KQSQTF
Trigger: AAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGG...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGACTAGAATGGTCATTTaGACAGGCCAGTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLTRMVI*TGQFLL
Trigger: GAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGT...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGAACTAGAATGGTCATTTaGACAGGCCAGTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGTRMVI*TGQFLL
Trigger: GAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGT...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTATAGCCACAGCATCTTaGGGGCTGAAGAGGTCACTT +
Preference number: 5 (lower is better)
Translates to: LREEKGSQGVWYVHQMITIATAS*GLKRSL
Trigger: AAGTGACCTCTTCAGCCCCAAAGATGCTGTGGCTAT...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTACCTTTGAGGAATTGTTaGGTGATAGCCACAGCATCT +
Preference number: 5 (lower is better)
Translates to: NRYIKTTGEKWVEMGSDLPLRNC*VIATAS
Trigger: AGATGCTGTGGCTATCACCAAACAATTCCTCAAAGG...TAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACCAGTCCTTTGAGGAATaGTTTGGTGATAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYQSFEE*FGDSHS
Trigger: GCTGTGGCTATCACCAAACAATTCCTCAAAGGACTG...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTGCTCTCCAACACCTTaGTTTAGTAGGGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLCSPTP*FSRENL
Trigger: CAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCA...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CACAAAGCCTGTAAGTGGTATACCAAACACTCCAATCTAGATCTTCTGATTCTATTGCCTTTTTATCTCTaGCTCTGCCTGGCACAGTGC +
Preference number: 5 (lower is better)
Translates to: HKACKWYTKHSNLDLLILLPFYL*LCLAQC
Trigger: GCACTGTGCCAGGCAGAGCAAGAGATAAAAAGGCAA...TAGAATCAGAAGATCTAGATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS TCA 90 bp TTGCTGAACCTCAGCCACAACTTCCTGTTCATCAGCTTCAGCCAATaGCTTCACGTCACTCTTGCTGATCACATTACTGAAATAAATGAA +
Preference number: 5 (lower is better)
Translates to: LLNLSHNFLFISFSQ*LHVTLADHITEINE
Trigger: TTCATTTATTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGATGAACAGGAAGTTGTGGCTGAGGTTCAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
CDS TCA 90 bp TACCTGAACCTCAGCCACAACTTCCTGTTCATCAGCTTCAGCCAATaGCTTCACGTCACTCTTGCTGATCACATTACTGAAATAAATGAA +
Preference number: 5 (lower is better)
Translates to: YLNLSHNFLFISFSQ*LHVTLADHITEINE
Trigger: TTCATTTATTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGATGAACAGGAAGTTGTGGCTGAGGTTCAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497638.2
CDS-3UTR CAA 90 bp CCTCTAGGCTCTGATAACCCTTTCCCCAAGTCAGATCCCAACAAAATTCATCAGCATGATCTCTCGATTTaGAGAATCAATGCGTTCAAA +
Preference number: 5 (lower is better)
Translates to: PLGSDNPFPKSDPNKIHQHDLSI*RINAFK
Trigger: TTTGAACGCATTGATTCTCAAAATCGAGAGATCATG...CTGATGAATTTTGTTGGGATCTGACTTGGGGAAAGGGTTATCAGAGCCTAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TCAGACTTATTGTTAGGACAACTCTGGGAGTCTTGTGTCTGTGCCAACCACGTAGAAAGATCAATCCGATaGTTGTTTATGCCTAGTAGT +
Preference number: 5 (lower is better)
Translates to: SDLLLGQLWESCVCANHVERSIR*LFMPSS
Trigger: ACTACTAGGCATAAACAACAATCGGATTGATCTTTC...TACGTGGTTGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGCCACTGTCACATGCTTaGAAACAGTCCCAGACATTT +
Preference number: 5 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMPLSHA*KQSQTF
Trigger: AAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGG...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACCCTTTGAGGAATTGTTaGGTGATAGCCACAGCATCT +
Preference number: 5 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYPLRNC*VIATAS
Trigger: AGATGCTGTGGCTATCACCAAACAATTCCTCAAAGG...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTCAGTCCTTTGAGGAATaGTTTGGTGATAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: LREEKGSQGVWYVHQMITQSFEE*FGDSHS
Trigger: GCTGTGGCTATCACCAAACAATTCCTCAAAGGACTG...AGTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGACTCCCTTCAGTCCTTaGAGGAATTGTTTGGTGATA +
Preference number: 5 (lower is better)
Translates to: RYIKTTGEKWVEMGSDLLTPFSP*RNCLVI
Trigger: TATCACCAAACAATTCCTCAAAGGACTGAAGGGAGT...CAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CTGATGAGAGCTGATAACGAATCATGGGACACTTCTTCAGAGATAAAAGGAGAGACTCCCTTCAGTCCTTaGAGGAATTGTTTGGTGATA +
Preference number: 5 (lower is better)
Translates to: LMRADNESWDTSSEIKGETPFSP*RNCLVI
Trigger: TATCACCAAACAATTCCTCAAAGGACTGAAGGGAGT...CTCTCCTTTTATCTCTGAAGAAGTGTCCCATGATTCGTTATCAGCTCTCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS-3UTR CAA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACTGCTCTCCAACACCTTaGTTTAGTAGGGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYCSPTP*FSRENL
Trigger: CAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCA...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAGCAACCCAAAATATaGAGGGAAAACAAATGTGGG +
Preference number: 5 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGQQPKI*RENKCG
Trigger: CCCACATTTGTTTTCCCTCAATATTTTGGGTTGCTG...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACATGATCTCTCGATTTaGAGAATCAATGCGTTCAAA +
Preference number: 5 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQHDLSI*RINAFK
Trigger: TTTGAACGCATTGATTCTCAAAATCGAGAGATCATG...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCCATGATCTCTCGATTTaGAGAATCAATGCGTTCAAA +
Preference number: 5 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGHDLSI*RINAFK
Trigger: TTTGAACGCATTGATTCTCAAAATCGAGAGATCATG...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GTTAAGGGAAGAGAAAGGAAGCCAAGGAGTGTGGTATGTACATCAAATGATTACGACTTCACGTCACTCTaGCTGATCACATTACTGAAA +
Preference number: 5 (lower is better)
Translates to: VKGRERKPRSVVCTSNDYDFTSL*LITLLK
Trigger: TTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTC...GTAATCATTTGATGTACATACCACACTCCTTGGCTTCCTTTCTCTTCCCTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGAAGATCAATCCGATTGTaGTTTATGCCTAGTAGTTCG +
Preference number: 5 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGRSIRL*FMPSSS
Trigger: CGAACTACTAGGCATAAACAACAATCGGATTGATCT...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp GATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCCCTTCATGTCTGCTATaGATTCTAGTTTTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: DCANRYIKTTGEKWVEMGPSCLL*ILVFAV
Trigger: AACAGCAAAAACTAGAATCAATAGCAGACATGAAGG...GCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACAACCTTCATGTCTGCTATaGATTCTAGTTTTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: KTTGEKWVEMGSDLLLGQPSCLL*ILVFAV
Trigger: AACAGCAAAAACTAGAATCAATAGCAGACATGAAGG...TTGTCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp ACAGAACCCAAAGCTGCTCTCCAACACCTTTGTTTAGTAGGGAAAACCTGTAGTCCTTCATGTCTGCTATaGATTCTAGTTTTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: TEPKAALQHLCLVGKTCSPSCLL*ILVFAV
Trigger: AACAGCAAAAACTAGAATCAATAGCAGACATGAAGG...ACTACAGGTTTTCCCTACTAAACAAAGGTGTTGGAGAGCAGCTTTGGGTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491789.2
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
CDS-3UTR CAA 90 bp CACAAAGCCTGTAAGTGGTATACCAAACACTCCAATCTAGATCTTCTGATTCTAACTAGAATGGTCATTTaGACAGGCCAGTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: HKACKWYTKHSNLDLLILTRMVI*TGQFLL
Trigger: GAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGT...TAGAATCAGAAGATCTAGATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CAA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGATCAAACTCTGTCACTTaGGGGTTCTGCAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRSNSVT*GFCRSL
Trigger: AAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGA...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTACCTTTGAGGAATTGTTaGGTGATAGCCACAGCATCT +
Preference number: 5 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLPLRNC*VIATAS
Trigger: AGATGCTGTGGCTATCACCAAACAATTCCTCAAAGG...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGCAGCAACCCAAAATATaGAGGGAAAACAAATGTGGG +
Preference number: 5 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMQQPKI*RENKCG
Trigger: CCCACATTTGTTTTCCCTCAATATTTTGGGTTGCTG...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TTGATGAAGAAGGATTACTTGCCTTTTTATCTCTTGCTCTGCCTGGCACAGTGCATGAAGAAGGATTACTaGCCTTTTTATCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: LMKKDYLPFYLLLCLAQCMKKDY*PFYLLL
Trigger: GAGCAAGAGATAAAAAGGCAAGTAATCCTTCTTCAT...GCACTGTGCCAGGCAGAGCAAGAGATAAAAAGGCAAGTAATCCTTCTTCATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CAA 90 bp ATAAAGACTACCGGAGAAAAGTGGGTTGAGATGGGCTCAGACTTATTGTTAGGACATGATCTCTCGATTTaGAGAATCAATGCGTTCAAA +
Preference number: 5 (lower is better)
Translates to: IKTTGEKWVEMGSDLLLGHDLSI*RINAFK
Trigger: TTTGAACGCATTGATTCTCAAAATCGAGAGATCATG...TCCTAACAATAAGTCTGAGCCCATCTCAACCCACTTTTCTCCGGTAGTCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp AGTGATTGTGCTAACAGATACATAAAGACTACCGGAGAAAAGTGGGTTGAGATGAGATCAATCCGATTGTaGTTTATGCCTAGTAGTTCG +
Preference number: 5 (lower is better)
Translates to: SDCANRYIKTTGEKWVEMRSIRL*FMPSSS
Trigger: CGAACTACTAGGCATAAACAACAATCGGATTGATCT...CATCTCAACCCACTTTTCTCCGGTAGTCTTTATGTATCTGTTAGCACAATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CAAATAATGAAACTGGCTCAGAGATTAAGTCAACAGCTCCATGTCACAAAGCCTAGATCAATCCGATTGTaGTTTATGCCTAGTAGTTCG +
Preference number: 5 (lower is better)
Translates to: QIMKLAQRLSQQLHVTKPRSIRL*FMPSSS
Trigger: CGAACTACTAGGCATAAACAACAATCGGATTGATCT...AGGCTTTGTGACATGGAGCTGTTGACTTAATCTCTGAGCCAGTTTCATTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CAA 90 bp CTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGACCACTGTCACATGCTTaGAAACAGTCCCAGACATTT +
Preference number: 5 (lower is better)
Translates to: LSQNGFLLWSYMVSQCHRPLSHA*KQSQTF
Trigger: AAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGG...TCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAACTCCCTTCAGTCCTTaGAGGAATTGTTTGGTGATA +
Preference number: 5 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLTPFSP*RNCLVI
Trigger: TATCACCAAACAATTCCTCAAAGGACTGAAGGGAGT...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGAACCACTGTCACATGCTTaGAAACAGTCCCAGACATTT +
Preference number: 5 (lower is better)
Translates to: FHKMDFYCGHTWFLSATEPLSHA*KQSQTF
Trigger: AAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGG...TTCTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTACACCAAATGAAAAAGTaGCTTGCCTTTATCAGAGAC +
Preference number: 5 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLHQMKK*LAFIRD
Trigger: GTCTCTGATAAAGGCAAGCAACTTTTTCATTTGGTG...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491789.2
CDS-3UTR CAA 90 bp CACAAAGCCTGTAAGTGGTATACCAAACACTCCAATCTAGATCTTCTGATTCTATCTTCTGATTCTAGTTaGGTGCTCTTTCTAGTAGAC +
Preference number: 5 (lower is better)
Translates to: HKACKWYTKHSNLDLLILSSDSS*VLFLVD
Trigger: GTCTACTAGAAAGAGCACCAAACTAGAATCAGAAGA...TAGAATCAGAAGATCTAGATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CAA 90 bp TTTCCCCAAGTCAGATCCCAACAAAATTCATCAGTAACTGAAGTGATTGTGCTAGAAAGATCAATCCGATaGTTGTTTATGCCTAGTAGT +
Preference number: 5 (lower is better)
Translates to: FPQVRSQQNSSVTEVIVLERSIR*LFMPSS
Trigger: ACTACTAGGCATAAACAACAATCGGATTGATCTTTC...TAGCACAATCACTTCAGTTACTGATGAATTTTGTTGGGATCTGACTTGGGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369128.9
ENST00000491789.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643970.1
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CCTTTCACAAAATGGATTTTTATTGTGGTCATACATGGTTTCTCAGTGCCACAGGAAAGATCAATCCGATaGTTGTTTATGCCTAGTAGT +
Preference number: 5 (lower is better)
Translates to: PFTKWIFIVVIHGFSVPQERSIR*LFMPSS
Trigger: ACTACTAGGCATAAACAACAATCGGATTGATCTTTC...CTGTGGCACTGAGAAACCATGTATGACCACAATAAAAATCCATTTTGTGAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535106.5
ENST00000611412.4
ENST00000644510.2
ENST00000644526.1
CDS-3UTR CAA 90 bp CACAAAGCCTGTAAGTGGTATACCAAACACTCCAATCTAGATCTTCTGATTCTAGAAAGATCAATCCGATaGTTGTTTATGCCTAGTAGT +
Preference number: 5 (lower is better)
Translates to: HKACKWYTKHSNLDLLILERSIR*LFMPSS
Trigger: ACTACTAGGCATAAACAACAATCGGATTGATCTTTC...TAGAATCAGAAGATCTAGATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS-3UTR CAA 90 bp CACAAAGCCTGTAAGTGGTATACCAAACACTCCAATCTAGATCTTCTGATTCTACCTTCATGTCTGCTATaGATTCTAGTTTTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: HKACKWYTKHSNLDLLILPSCLL*ILVFAV
Trigger: AACAGCAAAAACTAGAATCAATAGCAGACATGAAGG...TAGAATCAGAAGATCTAGATTGGAGTGTTTGGTATACCACTTACAGGCTTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS TCA 72 bp CCACGCGCGGGCGTTATTCTCCACCCACCTGCGGCCTaGAGATGCCTGAGGCCCGGACTCTCAGACCCCTAT +
Preference number: 6 (lower is better)
Translates to: PRAGVILHPPAA*RCLRPGLSDPY
Trigger: ATAGGGGTCTGAGAGTCCGGGCCTCAGGCATCTTCAGGCCGCAGGTGGGTGGAGAATAACGCCCGCGCGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS TCA 72 bp GCGTTATTCTCCACCCACCTGCGGCCTGAAGATGCCTaGGGCCCGGACTCTCAGACCCCTATTGCCCTTTGG +
Preference number: 6 (lower is better)
Translates to: ALFSTHLRPEDA*GPDSQTPIALW
Trigger: CCAAAGGGCAATAGGGGTCTGAGAGTCCGGGCCTCAGGCATCTTCAGGCCGCAGGTGGGTGGAGAATAACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535106.5
CDS CCA 72 bp GCCTCGCGAAATGAGGAACCTGGCACAAGGTTTGCTTaGAAGCAGGAACGACGGAGTGTGGCTACGTGCCCT +
Preference number: 6 (lower is better)
Translates to: ASRNEEPGTRFA*KQERRSVATCP
Trigger: AGGGCACGTAGCCACACTCCGTCGTTCCTGCTTCCAAGCAAACCTTGTGCCAGGTTCCTCATTTCGCGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369128.9
ENST00000462852.5
ENST00000478999.1
ENST00000535106.5
ENST00000643970.1
CDS CCA 72 bp GAGGGCAAGGGAGGTGGCATAATGCTCCCGGCCGCTTaGGACTCGGAGAGACGGCATTTAATAAATCACACG +
Preference number: 6 (lower is better)
Translates to: EGKGGGIMLPAA*DSERRHLINHT
Trigger: CGTGTGATTTATTAAATGCCGTCTCTCCGAGTCCCAAGCGGCCGGGAGCATTATGCCACCTCCCTTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535106.5
ENST00000643970.1
CDS CAA 90 bp CCCAAGAGAGTGGAGCCTCGCGAAATGAGGAACCTGGCACAAGGTTaGCTTGGAAGCAGGAACGACGGAGTGTGGCTACGTGCCCTATTT +
Preference number: 6 (lower is better)
Translates to: PKRVEPREMRNLAQG*LGSRNDGVWLRALF
Trigger: AAATAGGGCACGTAGCCACACTCCGTCGTTCCTGCTTCCAAGCAAACCTTGTGCCAGGTTCCTCATTTCGCGAGGCTCCACTCTCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369128.9
ENST00000462852.5
ENST00000478999.1
ENST00000535106.5
ENST00000643970.1
CDS GCA 72 bp GTGAAACCCCATCTCTTTTCGTGTTGTGCACTGTGGTaGCTCCCAGGACAATCCTCACTCCAGGAGTGGTGC +
Preference number: 6 (lower is better)
Translates to: VKPHLFSCCALW*LPGQSSLQEWC
Trigger: GCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGAGATGGGGTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000644526.1
CDS CAA 72 bp CTGCTTCACAGCAAAAACCACGTTCATGGCGGCGAATaGACAAGTACCCTACAGCCCTTCCCGCCCCCTTTT +
Preference number: 6 (lower is better)
Translates to: LLHSKNHVHGGE*TSTLQPFPPPF
Trigger: AAAAGGGGGCGGGAAGGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAACGTGGTTTTTGCTGTGAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000460366.5
ENST00000491789.2
ENST00000497638.2
ENST00000535106.5
ENST00000611412.4
ENST00000642919.1
ENST00000643611.1
ENST00000644510.2
CDS CCA 72 bp ATAGTGAAACCCCATCTCTTTTCGTGTTGTGCACTGTaGTGCCTCCCAGGACAATCCTCACTCCAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: IVKPHLFSCCAL*CLPGQSSLQEW
Trigger: CCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGAGATGGGGTTTCACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369128.9
ENST00000535106.5
ENST00000644526.1
CDS CAA 90 bp GTTTGCTTGGAAGCAGGAACGACGGAGTGTGGCTACGTGCCCTATTaGCCATTAACGCTTTCTTGCATGGCAGTGAGAGATGAGGGCAAG +
Preference number: 6 (lower is better)
Translates to: VCLEAGTTECGYVPY*PLTLSCMAVRDEGK
Trigger: CTTGCCCTCATCTCTCACTGCCATGCAAGAAAGCGTTAATGGCAAATAGGGCACGTAGCCACACTCCGTCGTTCCTGCTTCCAAGCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369128.9
ENST00000462852.5
ENST00000478999.1
ENST00000535106.5
ENST00000643970.1
CDS CAA 90 bp GCTTGGGACTCGGAGAGACGGCATTTAATAAATCACACGCGGTATTaGCGAAACAGTGGTCGAGATTCGTCTTCCCGGGTTCATTGCGTC +
Preference number: 6 (lower is better)
Translates to: AWDSERRHLINHTRY*RNSGRDSSSRVHCV
Trigger: GACGCAATGAACCCGGGAAGACGAATCTCGACCACTGTTTCGCAAATACCGCGTGTGATTTATTAAATGCCGTCTCTCCGAGTCCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643970.1
CDS CCA 72 bp GCACAAGGTTTGCTTGGAAGCAGGAACGACGGAGTGTaGCTACGTGCCCTATTTGCCATTAACGCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: AQGLLGSRNDGV*LRALFAINAFL
Trigger: CAAGAAAGCGTTAATGGCAAATAGGGCACGTAGCCACACTCCGTCGTTCCTGCTTCCAAGCAAACCTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369128.9
ENST00000462852.5
ENST00000478999.1
ENST00000535106.5
ENST00000643970.1
CDS CCA 72 bp AATGTGGGTACTGCTTCACAGCAAAAACCACGTTCATaGCGGCGAATTGACAAGTACCCTACAGCCCTTCCC +
Preference number: 6 (lower is better)
Translates to: NVGTASQQKPRS*RRIDKYPTALP
Trigger: GGGAAGGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAACGTGGTTTTTGCTGTGAAGCAGTACCCACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611412.4
CDS CAA 72 bp GAAGCAGGAACGACGGAGTGTGGCTACGTGCCCTATTaGCCATTAACGCTTTCTTGCATGGCAGTGAGAGAT +
Preference number: 6 (lower is better)
Translates to: EAGTTECGYVPY*PLTLSCMAVRD
Trigger: ATCTCTCACTGCCATGCAAGAAAGCGTTAATGGCAAATAGGGCACGTAGCCACACTCCGTCGTTCCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369128.9
ENST00000462852.5
ENST00000478999.1
ENST00000535106.5
ENST00000643970.1
CDS GCA 72 bp CCAGGCCCGCTGTCCTCTATCATTTTGGAAATGTACTaGTTCACAGCAAAAACCACGTTCATGGCGGCGAAT +
Preference number: 6 (lower is better)
Translates to: PGPLSSIILEMY*FTAKTTFMAAN
Trigger: ATTCGCCGCCATGAACGTGGTTTTTGCTGTGAAGCAGTACATTTCCAAAATGATAGAGGACAGCGGGCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000419023.3
ENST00000460366.5
ENST00000491789.2
ENST00000497638.2
ENST00000535106.5
ENST00000642919.1
ENST00000643611.1
ENST00000644510.2
ENST00000644526.1
CDS CCA 72 bp TGGAAATGTACTGCTTCACAGCAAAAACCACGTTCATaGCGGCGAATTGACAAGTACCCTACAGCCCTTCCC +
Preference number: 6 (lower is better)
Translates to: WKCTASQQKPRS*RRIDKYPTALP
Trigger: GGGAAGGGCTGTAGGGTACTTGTCAATTCGCCGCCATGAACGTGGTTTTTGCTGTGAAGCAGTACATTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000460366.5
ENST00000491789.2
ENST00000497638.2
ENST00000535106.5
ENST00000642919.1
ENST00000643611.1
ENST00000644510.2
CDS TCA 72 bp ATTGGACTGACCTGGAGAGCACTAGAATGGTCATTTTaGCAGGCCAGTTCTTGCTCAACCTCTGAAACCTCC +
Preference number: 6 (lower is better)
Translates to: IGLTWRALEWSF*QASSCSTSETS
Trigger: GGAGGTTTCAGAGGTTGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGTGCTCTCCAGGTCAGTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644704.1
CDS CAA 72 bp TCGGAGAGACGGCATTTAATAAATCACACGCGGTATTaGCGAAACAGTGGTCGAGATTCGTCTTCCCGGGTT +
Preference number: 6 (lower is better)
Translates to: SERRHLINHTRY*RNSGRDSSSRV
Trigger: AACCCGGGAAGACGAATCTCGACCACTGTTTCGCAAATACCGCGTGTGATTTATTAAATGCCGTCTCTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643970.1
CDS CAA 90 bp GAGCATAGAGGAGATGTCTATACCTTCAGTCCTTTGAGGAATTGTTaGGTGATAGCCACAGCATCTTTGGGGCTGAAGAGGTCACTTCCT +
Preference number: 6 (lower is better)
Translates to: EHRGDVYTFSPLRNC*VIATASLGLKRSLP
Trigger: AGGAAGTGACCTCTTCAGCCCCAAAGATGCTGTGGCTATCACCAAACAATTCCTCAAAGGACTGAAGGTATAGACATCTCCTCTATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472756.1
CDS CAA 90 bp TCTCACTCAGGAGAGCATAGAGGAGATGTCTATACCTTCAGTCCTTaGAGGAATTGTTTGGTGATAGCCACAGCATCTTTGGGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: SHSGEHRGDVYTFSP*RNCLVIATASLGLK
Trigger: CTTCAGCCCCAAAGATGCTGTGGCTATCACCAAACAATTCCTCAAAGGACTGAAGGTATAGACATCTCCTCTATGCTCTCCTGAGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472756.1
CDS CCA 72 bp TTTCAGATCAGAGTGTTCTGCATCTGCCTGGGCAGATaGAAGCTCAGTTTATGCAGTACCTTTGTAGGTCGA +
Preference number: 6 (lower is better)
Translates to: FQIRVFCICLGR*KLSLCSTFVGR
Trigger: TCGACCTACAAAGGTACTGCATAAACTGAGCTTCCATCTGCCCAGGCAGATGCAGAACACTCTGATCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478999.1
ENST00000643611.1
CDS CCA 72 bp CTTAATGCTTTCAGATCAGAGTGTTCTGCATCTGCCTaGGCAGATGGAAGCTCAGTTTATGCAGTACCTTTG +
Preference number: 6 (lower is better)
Translates to: LNAFRSECSASA*ADGSSVYAVPL
Trigger: CAAAGGTACTGCATAAACTGAGCTTCCATCTGCCCAGGCAGATGCAGAACACTCTGATCTGAAAGCATTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478999.1
ENST00000643611.1
CDS CCA 72 bp TGGACATGCGAACACAGCTCAGTCACTAGCTTCACTTaGGTAGCACTGTGTTGTTTTACTCTGTTTCCTGTT +
Preference number: 6 (lower is better)
Translates to: WTCEHSSVTSFT*VALCCFTLFPV
Trigger: AACAGGAAACAGAGTAAAACAACACAGTGCTACCCAAGTGAAGCTAGTGACTGAGCTGTGTTCGCATGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618148.1
CDS CAA 72 bp GGAGAGCATAGAGGAGATGTCTATACCTTCAGTCCTTaGAGGAATTGTTTGGTGATAGCCACAGCATCTTTG +
Preference number: 6 (lower is better)
Translates to: GEHRGDVYTFSP*RNCLVIATASL
Trigger: CAAAGATGCTGTGGCTATCACCAAACAATTCCTCAAAGGACTGAAGGTATAGACATCTCCTCTATGCTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472756.1
CDS CAA 90 bp TCATTTCAGCTTGAGCTCCAACAGCTTTACTTTAAAAACACAATGTaGAGTGGAAACAGTAGGCCCATCCCAAAGCCTTCCAAGTGCTCT +
Preference number: 6 (lower is better)
Translates to: SFQLELQQLYFKNTM*SGNSRPIPKPSKCS
Trigger: AGAGCACTTGGAAGGCTTTGGGATGGGCCTACTGTTTCCACTCAACATTGTGTTTTTAAAGTAAAGCTGTTGGAGCTCAAGCTGAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647278.1
CDS TCA 72 bp GTCTGTAAAAACAAAAGATTAACGTCTCTTTATCCATaGGAAGTACTTTCATACCAGGCCCGCTGTCCTCTA +
Preference number: 6 (lower is better)
Translates to: VCKNKRLTSLYP*EVLSYQARCPL
Trigger: TAGAGGACAGCGGGCCTGGTATGAAAGTACTTCTCATGGATAAAGAGACGTTAATCTTTTGTTTTTACAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642919.1
CDS CCA 72 bp TTCAAACAGTTCATATTCTTTAGTTATCACTTGCTGTaGGTGAGAGAGAAAGATGGTTTGTGCAACCATCTA +
Preference number: 6 (lower is better)
Translates to: FKQFIFFSYHLL*VREKDGLCNHL
Trigger: TAGATGGTTGCACAAACCATCTTTCTCTCTCACCCACAGCAAGTGATAACTAAAGAATATGAACTGTTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477558.2
CDS TCA 72 bp TCTTTTATATTCAAGAGGGTGCAGAGTGCCTTACCATaGCATGATATCAATACGGCAGAATTTTATGTTTGT +
Preference number: 6 (lower is better)
Translates to: SFIFKRVQSALP*HDINTAEFYVC
Trigger: ACAAACATAAAATTCTGCCGTATTGATATCATGTCATGGTAAGGCACTCTGCACCCTCTTGAATATAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618148.1
CDS TCA 72 bp TTAACTGAGAGAGTATTTGTTCTTGTGGGACTTCACTaGAACAGAATCAGCTATTGTGGCTATTTTAAAATG +
Preference number: 6 (lower is better)
Translates to: LTERVFVLVGLH*NRISYCGYFKM
Trigger: CATTTTAAAATAGCCACAATAGCTGATTCTGTTTCAGTGAAGTCCCACAAGAACAAATACTCTCTCAGTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618148.1