RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS16 (Homo sapiens)

Ensembl gene IDs: ENSG00000215305

Ensembl transcript IDs: ENST00000380443.5, ENST00000380445.8, ENST00000380469.7, ENST00000417508.1, ENST00000453689.5, ENST00000466415.1, ENST00000481812.4, ENST00000487461.1

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGAGGAACCCCTTGCTTaGGATGTACAGGATGGACTC +
Preference number: 2 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGEEPLA*DVQDGL
Trigger: GAGTCCATCCTGTACATCTCAAGCAAGGGGTTCCTC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
3UTR-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGAACTATGGCCCTTCTaGCAAGCCCAGGTGCTAGGG +
Preference number: 2 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAELWPF*QAQVLG
Trigger: CCCTAGCACCTGGGCTTGGCAGAAGGGCCATAGTTC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
3UTR-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGAGCTGGATGAACTATaGCCCTTCTGCCAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSELDEL*PFCQAQ
Trigger: CTGGGCTTGGCAGAAGGGCCATAGTTCATCCAGCTC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
3UTR-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCGAGCTGGATGAACTATaGCCCTTCTGCCAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCELDEL*PFCQAQ
Trigger: CTGGGCTTGGCAGAAGGGCCATAGTTCATCCAGCTC...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
3UTR-3UTR TCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCGAGGAACCCCTTGCTTaGGATGTACAGGATGGACTC +
Preference number: 2 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCEEPLA*DVQDGL
Trigger: GAGTCCATCCTGTACATCTCAAGCAAGGGGTTCCTC...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
3UTR-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCAGGGGAGGAACCCCTTaGTTGAGATGTACAGGATGG +
Preference number: 2 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCRGGTP*LRCTGW
Trigger: CCATCCTGTACATCTCAAGCAAGGGGTTCCTCCCCT...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
3UTR-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTAGGGGAGGAACCCCTTaGTTGAGATGTACAGGATGG +
Preference number: 2 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIRGGTP*LRCTGW
Trigger: CCATCCTGTACATCTCAAGCAAGGGGTTCCTCCCCT...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
3UTR-3UTR CAA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGGAGGAACCCCTTGCTaGAGATGTACAGGATGGACT +
Preference number: 3 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGGGTPC*RCTGWT
Trigger: AGTCCATCCTGTACATCTCAAGCAAGGGGTTCCTCC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
3UTR-3UTR CAA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGGAGGAACCCCTTGCTaGAGATGTACAGGATGGACT +
Preference number: 3 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIGGTPC*RCTGWT
Trigger: AGTCCATCCTGTACATCTCAAGCAAGGGGTTCCTCC...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGCATCGGCGGCTGTCTaGAGAGCTGCTACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGASAAV*RAATRP
Trigger: GGGGCGAGTAGCAGCTCTGCAGACAGCCGCCGATGC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGAAGCTGCTTACTCCTaGGGCCAGGCCAGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGEAAYS*GQARGR
Trigger: ACGCCCCCTGGCCTGGCCCCAGGAGTAAGCAGCTTC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGGAACTCGTGGGTGCTaGGGGAGAAGATGCGGACCC +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGGTRGC*GRRCGP
Trigger: GGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACTGTGGCCCCATCTGTaGCTCCCGTGCAGTGGGACA +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGLWPHL*LPCSGT
Trigger: TGTCCCACTGCACGGGAGCCACAGATGGGGCCACAG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGGTGCAGCAACACCGTaGACACCAGGTCAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGGAATP*TPGQCP
Trigger: GGGACACTGACCTGGTGTTCACGGTGTTGCTGCACC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGATGCTGCGGGAGAAGATaGGGACCCCATCGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGCCGRR*GPHRAQ
Trigger: CTGAGCTCGATGGGGTCCGCATCTTCTCCCGCAGCA...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAACGTGCCAGCTGCTCTaGACGCTTGTTGTGACCGCC +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGTCQLL*TLVVTA
Trigger: GGCGGTCACAACAAGCGTGCAGAGCAGCTGGCACGT...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGTAGCAGTCCATGGCTaGTGCAGACGGCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGVAVHG*CRRQLG
Trigger: TCCCAGCTGCCGTCTGCACCAGCCATGGACTGCTAC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGATGCACTTTGCAGACCTaGCACCTCTGGCATCCGGCG +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGCTLQT*HLWHPA
Trigger: CGCCGGATGCCAGAGGTGCCAGGTCTGCAAAGTGCA...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAAGCACACGCAGGTCCTaGCACATGTGCACGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGSTRRS*HMCTKL
Trigger: CAGCTTCGTGCACATGTGTCAGGACCTGCGTGTGCT...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACCATCTGTAGGAAGCTaGTTACTCCTGGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGPSVGS*LLLGPG
Trigger: GCCTGGCCCCAGGAGTAAGCAGCTTCCTACAGATGG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACATCTGTGGCTCCCGTaGAGTGGGACAATACGAGGC +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGHLWLP*SGTIRG
Trigger: GCCTCGTATTGTCCCACTGCACGGGAGCCACAGATG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAAAAACCAGACAGCCCTaGTACCATGCCCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGKTRQP*YHAPAP
Trigger: AGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTT...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACTGAGGGCCATGGGCTaGTTCCGAAGGGTCATGAAA +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGLRAMG*FRRVMK
Trigger: TTTCATGACCCTTCGGAATCAGCCCATGGCCCTCAG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAACTGTCGGTACAAACTaGGGGCCATGGGCTGATTCC +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGTVGTN*GPWADS
Trigger: GGAATCAGCCCATGGCCCTCAGTTTGTACCGACAGT...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACGTAGGAGCCGCATTTaGTCCTCTGTAGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGRRSRI*SSVALA
Trigger: AGCCAAGGCTACAGAGGATCAAATGCGGCTCCTACG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACAAGAAGCAAAGCCTTaGCCTTCTGCTCGGGACCCA +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGQEAKP*PSARDP
Trigger: TGGGTCCCGAGCAGAAGGTCAAGGCTTTGCTTCTTG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAAGCCAGAAGAATGTGTaGCACTCGGTCCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGSQKNV*HSVLAQ
Trigger: CTGTGCCAGGACCGAGTGGCACACATTCTTCTGGCT...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACACTGCGGAGCAGGCTaGATGGTCCAAGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGHCGAG*MVQEVK
Trigger: CTTTACCTCTTGGACCATGCAGCCTGCTCCGCAGTG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGTGTCCCCCAGCTTCTaGTTAATGGCTCGAGCCACA +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGVSPSF*LMARAT
Trigger: TGTGGCTCGAGCCATTAACCAGAAGCTGGGGGACAC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGATGTCCCCGCTCTCGATaGCCTTGCTTAGTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGCPRSR*PCLVPV
Trigger: AACTGGCACTAAGCAAGGCCATCGAGAGCGGGGACA...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACATTCCGGTGTTCGATaGCCACATCTGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGHSGVR*PHLQPE
Trigger: CTCAGGCTGCAGATGTGGCCATCGAACACCGGAATG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAAGCGTCTCTAGCTCCTaGTGCTTACAGAACTGTCGG +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGSVSSS*CLQNCR
Trigger: CCGACAGTTCTGTAAGCATCAGGAGCTAGAGACGCT...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGGCTGGCCAGAGGCATaGCGGAAGCAGAGTATATAT +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGGWPEA*RKQSIY
Trigger: ATATATACTCTGCTTCCGGCATGCCTCTGGCCAGCC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGCCAGGGGGCGTCACTaGGGAGCAGGCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALARGRH*GAGCMV
Trigger: GACCATGCAGCCTGCTCCGCAGTGACGCCCCCTGGC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGCCAGGGGGCGTCACTaGGGAGCAGGCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSARGRH*GAGCMV
Trigger: GACCATGCAGCCTGCTCCGCAGTGACGCCCCCTGGC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAAGGGGAGGAACCCCTTaGTTGAGATGTACAGGATGG +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGRGGTP*LRCTGW
Trigger: CCATCCTGTACATCTCAAGCAAGGGGTTCCTCCCCT...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGATCATCCAGCACAAACTaGATGCTCTCGGGTGCATCG +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGSSSTN*MLSGAS
Trigger: CGATGCACCCGAGAGCATCCAGTTTGTGCTGGATGA...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCACTGCTGCACGGCCTaGGTCAGCTGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAHCCTA*VSWPSS
Trigger: GGAGCTGGGCCAGCTGACCCAGGCCGTGCAGCAGTG...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAACTCGCATATCTGGATaGCCAGGGGGTAAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGTRISG*PGGKVS
Trigger: GGAGACTTTACCCCCTGGCCATCCAGATATGCGAGT...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACAGCTCCTCCTCAGCTaGCCAGCCCAGGGACACCAC +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALQLLLS*PAQGHH
Trigger: GTGGTGTCCCTGGGCTGGTCAGCTGAGGAGGAGCTG...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACCCGGATGTTGCAGTTaGACTCACATAGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGPGCCS*THIASP
Trigger: AGGAGAAGCTATGTGAGTTCAACTGCAACATCCGGG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAAGCCACATCCTCATCTaGGACATCCTTCTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGSHILI*DILLLH
Trigger: GTGCAACAGAAGGATGTCTCAGATGAGGATGTGGCT...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCGGGGCCCCCATAGGGTaGAGCAGCCACCAGGCAATC +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCGAPIG*SSHQAI
Trigger: GATTGCCTGGTGGCTGCTGCACCCTATGGGGGCCCC...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCCACGGCCCTCTCCTTaGTACGAGGACGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAPRPSP*YEDGCT
Trigger: GGTGCAGCCGTCCTCGTAGCAAGGAGAGGGCCGTGG...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCCACGGCCCTCTCCTTaGTACGAGGACGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCPRPSP*YEDGCT
Trigger: GGTGCAGCCGTCCTCGTAGCAAGGAGAGGGCCGTGG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGCATCGGCGGCTGTCTaGAGAGCTGCTACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAASAAV*RAATRP
Trigger: GGGGCGAGTAGCAGCTCTGCAGACAGCCGCCGATGC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCTGAGGGTGAAGCGGTaGGCCCCTGTGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCLRVKR*APVRMA
Trigger: GGCCATCCTCACAGGGGCCCACCGCTTCACCCTCAG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCGAAGCTGCTTACTCCTaGGGCCAGGCCAGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCEAAYS*GQARGR
Trigger: ACGCCCCCTGGCCTGGCCCCAGGAGTAAGCAGCTTC...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACTGTCCAGCAGCACCTaGATGGTGAGCTGCTTATAT +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGLSSST*MVSCLY
Trigger: ATATAAGCAGCTCACCATCCAGGTGCTGCTGGACAG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCGGTGCAGACGGCAGCTaGGAAGCACCGAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCGADGS*EAPRGH
Trigger: GTGTCCCCTCGGTGCTTCCCAGCTGCCGTCTGCACC...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380469.7
CDS-3UTR TCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCGGGTACCTGCTCCCCTaGGCGTGGCTCATACTCCAG +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCGYLLP*AWLILQ
Trigger: CTGGAGTATGAGCCACGCTCAGGGGAGCAGGTACCC...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGCAGTCCATGGCTGGTaGAGACGGCAGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALAVHGW*RRQLGS
Trigger: GCTTCCCAGCTGCCGTCTGCACCAGCCATGGACTGC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGCAGTCCATGGCTGGTaGAGACGGCAGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSAVHGW*RRQLGS
Trigger: GCTTCCCAGCTGCCGTCTGCACCAGCCATGGACTGC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGCCTCAATGCACTGCTaGACGGCCTGGGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALASMHC*TAWVSW
Trigger: CCAGCTGACCCAGGCCGTGCAGCAGTGCATTGAGGC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGCAGCCTCAATGCACTaGTGCACGGCCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSAASMH*CTAWVS
Trigger: GCTGACCCAGGCCGTGCAGCAGTGCATTGAGGCTGC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCGTCCTGCAGCCTCAATaGACTGCTGCACGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCVLQPQ*TAARPG
Trigger: CCCAGGCCGTGCAGCAGTGCATTGAGGCTGCAGGAC...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAACAACCATAGGCTCGTaGAGCAATGTCGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGTTIGS*SNVGVR
Trigger: TCTTACTCCGACATTGCTGCACGAGCCTATGGTTGT...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCTGAGGGTGAAGCGGTaGGCCCCTGTGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSILRVKR*APVRMA
Trigger: GGCCATCCTCACAGGGGCCCACCGCTTCACCCTCAG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGCTGGCCCAGCTCCTaGATCTCCCGCAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSSWPSS*ISRRYS
Trigger: CGAGTACCTGCGGGAGATCCAGGAGCTGGGCCAGCT...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR TCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCCACCAGGCAATCCCTaGGTTCCTCCTTCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSPPGNP*VPPSGP
Trigger: GGGACCTGAAGGAGGAACTCAGGGATTGCCTGGTGG...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCGCATCCGGCGGAGTTTaGGGTCACCCACATTGGCAC +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCASGGV*GHPHWH
Trigger: GTGCCAATGTGGGTGACCTCAAACTCCGCCGGATGC...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCGAAGGAGGCGGCCCTaGGCAGACTCTTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIARRRRP*ADSSAC
Trigger: ACATGCAGAAGAGTCTGCTCAGGGCCGCCTCCTTCG...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR TCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGGGCCAGGATCCTGCTaGCGCCCTGTACTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAGPGSC*RPVLQE
Trigger: TTCCTGAAGTACAGGGCGTCAGCAGGATCCTGGCCC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGCCAGGATCCTGCTaGCGCCCTGTACTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALGPGSC*RPVLQE
Trigger: TTCCTGAAGTACAGGGCGTCAGCAGGATCCTGGCCC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGGGTACCTGCTCCCCTaGGCGTGGCTCATACTCCAG +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIGYLLP*AWLILQ
Trigger: CTGGAGTATGAGCCACGCTCAGGGGAGCAGGTACCC...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGTGCAGCAACACCGTaGACACCAGGTCAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALGAATP*TPGQCP
Trigger: GGGACACTGACCTGGTGTTCACGGTGTTGCTGCACC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGATTCCGAAGGGTCATaGAAAAATCTCCTCGGTTCA +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGDSEGS*KNLLGS
Trigger: TGAACCGAGGAGATTTTTTCATGACCCTTCGGAATC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTTGTGCCCTGGCCCGTTaGATCTTGTCAGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSCALAR*ILSAVA
Trigger: GGCCACAGCTGACAAGATTCAACGGGCCAGGGCACA...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTGTGCCCTGGCCCGTTaGATCTTGTCAGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIACALAR*ILSAVA
Trigger: GGCCACAGCTGACAAGATTCAACGGGCCAGGGCACA...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCAGGAGGGTGCACTTTaGAGACCTGGCACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCQEGAL*RPGTSG
Trigger: GCCAGAGGTGCCAGGTCTGCAAAGTGCACCCTCCTG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCTGGATGCTCTCGGGTaGATCGCCCACCACCATCAG +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSLDALG*IAHHHQ
Trigger: CTGATGGTGGTGGGCGATGCACCCGAGAGCATCCAG...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGCAGGAACTCGTGGGTaGTGCGGGAGAAGATGCGGA +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALAGTRG*CGRRCG
Trigger: TCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGCCGCTGGAACCTCATaGAGGAACTCGTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAAAGTS*RNSWVL
Trigger: CAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGGC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCAGGAGAAGGGGTACCTaGTCCCCTGAGCGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCRRRGT*SPERGS
Trigger: TGAGCCACGCTCAGGGGAGCAGGTACCCCTTCTCCT...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCACGTGCCAGCTGCTCTaGACGCTTGTTGTGACCGCC +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCTCQLL*TLVVTA
Trigger: GGCGGTCACAACAAGCGTGCAGAGCAGCTGGCACGT...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTACAGCCCTGCTACCATaGCCCCGCTCCTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIATALLP*PRSSAL
Trigger: CAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGT...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGTAGCAGTCCATGGCTaGTGCAGACGGCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAVAVHG*CRRQLG
Trigger: TCCCAGCTGCCGTCTGCACCAGCCATGGACTGCTAC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCCGTGTAGCAGTCCATaGCTGGTGCAGACGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSPCSSP*LVQTAA
Trigger: AGCTGCCGTCTGCACCAGCCATGGACTGCTACACGG...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGGCAGAGTCCCCGAGTaGGTTCCAGTTCGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAGRVPE*VPVRRV
Trigger: TACACGGCGAACTGGAACCCACTCGGGGACTCTGCC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGCAGAGTCCCCGAGTaGGTTCCAGTTCGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALGRVPE*VPVRRV
Trigger: TACACGGCGAACTGGAACCCACTCGGGGACTCTGCC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTATCCTCAGCAGTGCAATaGGGCCCCCATAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALSSAVQ*GPHRVQ
Trigger: CTGCACCCTATGGGGGCCCCATTGCACTGCTGAGGA...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGTATATATCGAGCACTaGCCTCACACTAGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGVYIEH*PHTSSF
Trigger: AAAGCTGCTAGTGTGAGGCCAGTGCTCGATATATAC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTCTTCCACAGCAGGCTaGCCAGAGGCATGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIASSTAG*PEACRK
Trigger: CTTCCGGCATGCCTCTGGCCAGCCTGCTGTGGAAGA...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCAGACCTGGCACCTCTaGCATCCGGCGGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCQTWHL*HPAEFE
Trigger: CTCAAACTCCGCCGGATGCCAGAGGTGCCAGGTCTG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACAGACCTGGCACCTCTaGCATCCGGCGGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALQTWHL*HPAEFE
Trigger: CTCAAACTCCGCCGGATGCCAGAGGTGCCAGGTCTG...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTGCACTTTGCAGACCTaGCACCTCTGGCATCCGGCG +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIACTLQT*HLWHPA
Trigger: CGCCGGATGCCAGAGGTGCCAGGTCTGCAAAGTGCA...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGTGCCACTCGGTCCTaGCACAGCACAGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCCATRS*HSTVQQ
Trigger: CTGCTGGACTGTGCTGTGCCAGGACCGAGTGGCACA...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTATGTGCCACTCGGTCCTaGCACAGCACAGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALCATRS*HSTVQQ
Trigger: CTGCTGGACTGTGCTGTGCCAGGACCGAGTGGCACA...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGTGGCTCCCGTGCAGTaGGACAATACGAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAVAPVQ*DNTRLS
Trigger: GCTGAGCCTCGTATTGTCCCACTGCACGGGAGCCAC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGTGGCTCCCGTGCAGTaGGACAATACGAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSVAPVQ*DNTRLS
Trigger: GCTGAGCCTCGTATTGTCCCACTGCACGGGAGCCAC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCTGTGGCCCCATCTGTaGCTCCCGTGCAGTGGGACA +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSILWPHL*LPCSGT
Trigger: TGTCCCACTGCACGGGAGCCACAGATGGGGCCACAG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTCTCATACTCCTTCTaGGCCTCCAGGAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCFSYSF*ASRSSA
Trigger: GGCGCTGCTCCTGGAGGCTCAGAAGGAGTATGAGAA...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR TCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGCCACATCTGCAGCCTaGGCCACATCGCCAACAAGA +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALATSAA*ATSPTR
Trigger: TCTTGTTGGCGATGTGGCTCAGGCTGCAGATGTGGC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGCCACATCTGCAGCCTaGGCCACATCGCCAACAAGA +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAATSAA*ATSPTR
Trigger: TCTTGTTGGCGATGTGGCTCAGGCTGCAGATGTGGC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCTGCACCAGACCATCTaGTTTGGAGGTGCCCGGATG +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSLHQTI*FGGARM
Trigger: CATCCGGGCACCTCCAAAGCAGATGGTCTGGTGCAG...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCCAGCACAAACTGGATaGTCTCGGGTGCATCGCCCA +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSPAQTG*SRVHRP
Trigger: TGGGCGATGCACCCGAGAGCATCCAGTTTGTGCTGG...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTAGGAGAAGGGGTACCTaGTCCCCTGAGCGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIRRRGT*SPERGS
Trigger: TGAGCCACGCTCAGGGGAGCAGGTACCCCTTCTCCT...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGATGCGGAAGTCACGTaGCAGCTGCTCTGCACGCTT +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALDAEVT*QLLCTL
Trigger: AAGCGTGCAGAGCAGCTGGCACGTGACTTCCGCATC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGCCTCTTGTCAGGGATaGGGAAGTCACGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAASCQG*GSHVPA
Trigger: AGCTGGCACGTGACTTCCGCATCCCTGACAAGAGGC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAAAAGCCTTGACCTTCTaGTCGGGACCCACGCGGGAA +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALKALTF*SGPTRE
Trigger: TTCCCGCGTGGGTCCCGAGCAGAAGGTCAAGGCTTT...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTTCGATGGCCACATCTaGAGCCTGAGCCACATCGCC +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAFDGHI*SLSHIA
Trigger: GGCGATGTGGCTCAGGCTGCAGATGTGGCCATCGAA...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTACAGCCCTGCTACCATaGCCCCGCTCCTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSITALLP*PRSSAL
Trigger: CAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGT...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAAAAACCAGACAGCCCTaGTACCATGCCCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALKTRQP*YHAPAP
Trigger: AGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTT...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTTTGGATGCTCTCGGGTaGATCGCCCACCACCATCAG +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSLDALG*IAHHHQ
Trigger: CTGATGGTGGTGGGCGATGCACCCGAGAGCATCCAA...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380469.7
CDS-3UTR CCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTTCCTCAGCAGTGCAATaGGGCCCCCATAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSISSAVQ*GPHRVQ
Trigger: CTGCACCCTATGGGGGCCCCATTGCACTGCTGAGGA...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTTCTTCCACAGCAGGCTaGCCAGAGGCATGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSISSTAG*PEACRK
Trigger: CTTCCGGCATGCCTCTGGCCAGCCTGCTGTGGAAGA...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTATTCCTCGCTGGCCGCTaGAACCTCATGCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALFLAGR*NLMQEL
Trigger: GAGTTCCTGCATGAGGTTCCAGCGGCCAGCGAGGAA...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR CCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGAATCTTGTCAGCTGTaGCCCCATCTGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALESCQL*PHLWLP
Trigger: CGGGAGCCACAGATGGGGCCACAGCTGACAAGATTC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGAATCTTGTCAGCTGTaGCCCCATCTGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSESCQL*PHLWLP
Trigger: CGGGAGCCACAGATGGGGCCACAGCTGACAAGATTC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACTCCTCACTTCTTCTaGGCTTGTGCCCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSTPHFF*ACALAR
Trigger: ACGGGCCAGGGCACAAGCCCAGAAGAAGTGAGGAGT...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTAGTCCCGAACAGCATTaGGCACACGCAGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSISPEQH*AHAGPD
Trigger: GTCAGGACCTGCGTGTGCTCAATGCTGTTCGGGACT...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR TCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACTGAGGGCCATGGGCTaGTTCCGAAGGGTCATGAAA +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALLRAMG*FRRVMK
Trigger: TTTCATGACCCTTCGGAATCAGCCCATGGCCCTCAG...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTACTGTCGGTACAAACTaGGGGCCATGGGCTGATTCC +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIATVGTN*GPWADS
Trigger: GGAATCAGCCCATGGCCCTCAGTTTGTACCGACAGT...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCGTAGGAGCCGCATTTaGTCCTCTGTAGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCRRSRI*SSVALA
Trigger: AGCCAAGGCTACAGAGGATCAAATGCGGCTCCTACG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTCTGCACGCTTGTTGTaGCCGCCAAGAATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIASARLL*PPRMRV
Trigger: CACCCTCATTCTTGGCGGTCACAACAAGCGTGCAGA...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCAAGAAGCAAAGCCTTaGCCTTCTGCTCGGGACCCA +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAQEAKP*PSARDP
Trigger: TGGGTCCCGAGCAGAAGGTCAAGGCTTTGCTTCTTG...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGCCAGAAGAATGTGTaGCACTCGGTCCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSSQKNV*HSVLAQ
Trigger: CTGTGCCAGGACCGAGTGGCACACATTCTTCTGGCT...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACACTGCGGAGCAGGCTaGATGGTCCAAGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALHCGAG*MVQEVK
Trigger: CTTTACCTCTTGGACCATGCAGCCTGCTCCGCAGTG...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCTGCACCAGACCATCTaGTTTGGAGGTGCCCGGATG +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSILHQTI*FGGARM
Trigger: CATCCGGGCACCTCCAAAGCAGATGGTCTGGTGCAG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACTGGTGCTCATGTCCTaGAGCCTCAATGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALLVLMS*SLNALL
Trigger: CAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAG...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGATGCGGAAGTCACGTaGCAGCTGCTCTGCACGCTT +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIDAEVT*QLLCTL
Trigger: AAGCGTGCAGAGCAGCTGGCACGTGACTTCCGCATC...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCTCTTGTCAGGGATaGGGAAGTCACGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIASCQG*GSHVPA
Trigger: AGCTGGCACGTGACTTCCGCATCCCTGACAAGAGGC...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCATCTGTGGCTCCCGTaGAGTGGGACAATACGAGGC +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIHLWLP*SGTIRG
Trigger: GCCTCGTATTGTCCCACTGCACGGGAGCCACAGATG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGAACTATGGCCCTTCTaGCAAGCCCAGGTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIELWPF*QAQVLG
Trigger: CCCTAGCACCTGGGCTTGGCAGAAGGGCCATAGTTC...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCCAGACCATCTGCTTTaGAGGTGCCCGGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCPDHLL*RCPDVA
Trigger: TGCAACATCCGGGCACCTCCAAAGCAGATGGTCTGG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCCAGACCATCTGCTTTaGAGGTGCCCGGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSPDHLL*RCPDVA
Trigger: TGCAACATCCGGGCACCTCCAAAGCAGATGGTCTGG...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTTCATGCAGGAACTCGTaGGTGCTGCGGGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSSCRNS*VLREKM
Trigger: CATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGA...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTTTCTGCATGTCTGGCTaGTGCTCATGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSFCMSG*CSCPAA
Trigger: GGCTGCAGGACATGAGCACCAGCCAGACATGCAGAA...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTTGTCCCCGCTCTCGATaGCCTTGCTTAGTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSCPRSR*PCLVPV
Trigger: AACTGGCACTAAGCAAGGCCATCGAGAGCGGGGACA...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCTTCTGCAGCATAGCTaGCTCGGATGTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCLLQHS*LGCGSC
Trigger: GCAGCTTCCACATCCGAGCCAGCTATGCTGCAGAAG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCATTCCGGTGTTCGATaGCCACATCTGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSHSGVR*PHLQPE
Trigger: CTCAGGCTGCAGATGTGGCCATCGAACACCGGAATG...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTCTGGGCTTGTGCCCTaGCCCGTTGAATCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIASGLVP*PVESCQ
Trigger: CTGACAAGATTCAACGGGCCAGGGCACAAGCCCAGA...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGGGCTTGTGCCCTaGCCCGTTGAATCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCSGLVP*PVESCQ
Trigger: CTGACAAGATTCAACGGGCCAGGGCACAAGCCCAGA...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCTTCATTGCCCATGCTaGAGTGTCTCCGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSLHCPC*SVSGSH
Trigger: GTGACTTCCGGAGACACTTCAGCATGGGCAATGAAG...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACTTCATTGCCCATGCTaGAGTGTCTCCGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALLHCPC*SVSGSH
Trigger: GTGACTTCCGGAGACACTTCAGCATGGGCAATGAAG...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCCAGGTGTCGGTAGGTaGAGGAGACAGCCATCTGTA +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIPGVGR*RRQPSV
Trigger: TACAGATGGCTGTCTCCTTCACCTACCGACACCTGG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACACATAGCTTCTCCTTaGGTGATGCTGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALHIASP*VMLSPS
Trigger: GGATGGGGACAGCATCACTCAAGGAGAAGCTATGTG...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAAGCGTCTCTAGCTCCTaGTGCTTACAGAACTGTCGG +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALSVSSS*CLQNCR
Trigger: CCGACAGTTCTGTAAGCATCAGGAGCTAGAGACGCT...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTTCTGCACGCTTGTTGTaGCCGCCAAGAATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSISARLL*PPRMRV
Trigger: CACCCTCATTCTTGGCGGTCACAACAAGCGTGCAGA...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGAGGAACCCCTTGCTTaGGATGTACAGGATGGACTC +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALEEPLA*DVQDGL
Trigger: GAGTCCATCCTGTACATCTCAAGCAAGGGGTTCCTC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGCAGCACCTGGATGGTaGGCTGCTTATATTGGATGC +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSAAPGW*AAYIGC
Trigger: GCATCCAATATAAGCAGCTCACCATCCAGGTGCTGC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGGCTGGCCAGAGGCATaGCGGAAGCAGAGTATATAT +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAGWPEA*RKQSIY
Trigger: ATATATACTCTGCTTCCGGCATGCCTCTGGCCAGCC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTTGCATGTCTGGCTGGTaGTCATGTCCTGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSICMSGW*SCPAAS
Trigger: TGAGGCTGCAGGACATGAGCACCAGCCAGACATGCA...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCTGAGCAGACTCTTCTaGATGTCTGGCTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCLSRLF*MSGWCS
Trigger: TGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCGCTCTCGATGGCCTTaGTTAGTGCCAGTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIRSRWP*LVPVCS
Trigger: GGAGCAAACTGGCACTAAGCAAGGCCATCGAGAGCG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTAGCTCGTTCTTCAGGTaGAGCAACACCGTGAACACC +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIASSFFR*SNTVNT
Trigger: GGTGTTCACGGTGTTGCTGCACCTGAAGAACGAGCT...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACAATGGGTGATTTCTTaGTCTTGGAAAACTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGQWVIS*SWKTSL
Trigger: TAGAGAAGTTTTCCAAGAGCAAGAAATCACCCATTG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACTTCTTCTGGGCTTGTaGCCTGGCCCGTTGAATCTT +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALLLLGL*PGPLNL
Trigger: AAGATTCAACGGGCCAGGGCACAAGCCCAGAAGAAG...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCTTCTTCTGGGCTTGTaGCCTGGCCCGTTGAATCTT +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCLLLGL*PGPLNL
Trigger: AAGATTCAACGGGCCAGGGCACAAGCCCAGAAGAAG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTAGGGGAGGAACCCCTTaGTTGAGATGTACAGGATGG +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIARGGTP*LRCTGW
Trigger: CCATCCTGTACATCTCAAGCAAGGGGTTCCTCCCCT...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGCTGCTTATATTGGATaGTCTCGGGTGCATCGCCCA +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAAAYIG*SRVHRP
Trigger: TGGGCGATGCACCCGAGAGCATCCAATATAAGCAGC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380469.7
CDS-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCCAGAACCCGGTTCTaGAGCACTTCATTGCCCATG +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCSRTRF*STSLPM
Trigger: CATGGGCAATGAAGTGCTCCAGAACCGGGTTCTGGA...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTCCAGAACCCGGTTCTaGAGCACTTCATTGCCCATG +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIASRTRF*STSLPM
Trigger: CATGGGCAATGAAGTGCTCCAGAACCGGGTTCTGGA...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTACTCTTCTGCATGTCTaGCTGGTGCTCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIATLLHV*LVLMSC
Trigger: GCAGGACATGAGCACCAGCCAGACATGCAGAAGAGT...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR CCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAACTCGCATATCTGGATaGCCAGGGGGTAAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALTRISG*PGGKVS
Trigger: GGAGACTTTACCCCCTGGCCATCCAGATATGCGAGT...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGTGTCCCCCAGCTTCTaGTTAATGGCTCGAGCCACA +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIVSPSF*LMARAT
Trigger: TGTGGCTCGAGCCATTAACCAGAAGCTGGGGGACAC...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCTTCTGCAGCATAGCTaGCTCGGATGTGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSILLQHS*LGCGSC
Trigger: GCAGCTTCCACATCCGAGCCAGCTATGCTGCAGAAG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGGGAAGCATACTTCTTaGCTTCGTATTTGTTATGTT +
Preference number: 4 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGGKHTS*LRICYV
Trigger: AACATAACAAATACGAAGCCAAGAAGTATGCTTCCC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGAGCTGGATGAACTATaGCCCTTCTGCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIELDEL*PFCQAQ
Trigger: CTGGGCTTGGCAGAAGGGCCATAGTTCATCCAGCTC...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGAACCAAACTCAGTGTaGAAGATCCGGGCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSEPNSV*KIRASR
Trigger: TCTGGATGCCCGGATCTTTCACACTGAGTTTGGTTC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCACATAGCTTCTCCTTaGGTGATGCTGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIHIASP*VMLSPS
Trigger: GGATGGGGACAGCATCACTCAAGGAGAAGCTATGTG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCCCGGATGTTGCAGTTaGACTCACATAGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAPGCCS*THIASP
Trigger: AGGAGAAGCTATGTGAGTTCAACTGCAACATCCGGG...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCCATTGAGGCAATTTTaGAGATTTCCTCGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAPLRQF*RFPRWP
Trigger: CGGCCAGCGAGGAAATCTTCAAAATTGCCTCAATGG...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR TCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGCAGCACCTGGATGGTaGGCTGCTTATATTGGCTAT +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAAAPGW*AAYIGY
Trigger: ATAGCCAATATAAGCAGCTCACCATCCAGGTGCTGC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR TCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGCCACATCCTCATCTaGGACATCCTTCTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSSHILI*DILLLH
Trigger: GTGCAACAGAAGGATGTCTCAGATGAGGATGTGGCT...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGAGGAACCCCTTGCTTaGGATGTACAGGATGGACTC +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIEEPLA*DVQDGL
Trigger: GAGTCCATCCTGTACATCTCAAGCAAGGGGTTCCTC...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTGTGTCTGTGAAGAGTaGCAGGTGTCGGTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIACVCEE*QVSVGE
Trigger: TTCACCTACCGACACCTGGCACTCTTCACAGACACA...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGTGTCTGTGAAGAGTaGCAGGTGTCGGTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCCVCEE*QVSVGE
Trigger: TTCACCTACCGACACCTGGCACTCTTCACAGACACA...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCATCTGCTTTGGAGGTaGCCGGATGTTGCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAHLLWR*PDVAVE
Trigger: TTCAACTGCAACATCCGGGCACCTCCAAAGCAGATG...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTAGCTCGTTCTTCAGGTaGAGCAACACCGTGAACACC +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSISSFFR*SNTVNT
Trigger: GGTGTTCACGGTGTTGCTGCACCTGAAGAACGAGCT...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCTCGGATGTGGAAGCTaGCCAATTCCTGGTGATTGT +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSLGCGS*PIPGDC
Trigger: ACAATCACCAGGAATTGGGCAGCTTCCACATCCGAG...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCGGATGTGGAAGCTaGCCAATTCCTGGTGATTGT +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIALGCGS*PIPGDC
Trigger: ACAATCACCAGGAATTGGGCAGCTTCCACATCCGAG...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCAATACGCTCTTCTaGAGCATAGCTGGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIALNTLF*SIAGSD
Trigger: ATCCGAGCCAGCTATGCTGCAGAAGAGCGTATTGAG...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCCAATCTTCCAAATCTaGCAGGGCAGTCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCPIFQI*QGSQLQ
Trigger: CTGAAGCTGACTGCCCTGGCAGATTTGGAAGATTGG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACCAATCTTCCAAATCTaGCAGGGCAGTCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALPIFQI*QGSQLQ
Trigger: CTGAAGCTGACTGCCCTGGCAGATTTGGAAGATTGG...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTATACTCGTCCGCCTTCTaGCTCTCTTTCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALYSSAF*LSFSYS
Trigger: GGAGTATGAGAAAGAGAGCCAGAAGGCGGACGAGTA...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCACGAAGCTGTCGGGTaGAAATCTGTCCAGGAAACA +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAHEAVG*KSVQET
Trigger: TGTTTCCTGGACAGATTTCCACCCGACAGCTTCGTG...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR CCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGTGAGCTGCTTATATTaGATGCTCTCGGGTGCATCG +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALVSCLY*MLSGAS
Trigger: CGATGCACCCGAGAGCATCCAATATAAGCAGCTCAC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380469.7
CDS-3UTR TCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTATATATTGGCTATAGGTaGGCGGGATCCCGATGTGAT +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALYIGYR*AGSRCD
Trigger: ATCACATCGGGATCCCGCTCACCTATAGCCAATATA...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR GCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCAGGTCCCAGTCCATaGTGTACAGCTCATATTTCC +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCSGPSP*CTAHIS
Trigger: GGAAATATGAGCTGTACAGCATGGACTGGGACCTGA...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCATCTGCTTTGGAGGTaGCCGGATGTTGCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIHLLWR*PDVAVE
Trigger: TTCAACTGCAACATCCGGGCACCTCCAAAGCAGATG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTACAACCATAGGCTCGTaGAGCAATGTCGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIATTIGS*SNVGVR
Trigger: TCTTACTCCGACATTGCTGCACGAGCCTATGGTTGT...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACTCTGTAGCCTTGGCTaGAAACTCATTCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALLCSLG*KLILGL
Trigger: AAGGCCAAGAATGAGTTTGCAGCCAAGGCTACAGAG...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTCTGTAGCCTTGGCTaGAAACTCATTCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIALCSLG*KLILGL
Trigger: AAGGCCAAGAATGAGTTTGCAGCCAAGGCTACAGAG...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTACCTGGATGGTGAGCTaGTTATATTGGATGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIATWMVS*LYWMLS
Trigger: CGAGAGCATCCAATATAAGCAGCTCACCATCCAGGT...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380469.7
CDS-3UTR CCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCTGTCCAGCAGCACCTaGATGGTGAGCTGCTTATAT +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSILSSST*MVSCLY
Trigger: ATATAAGCAGCTCACCATCCAGGTGCTGCTGGACAG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCTGCAAACTCATTCTTaGCCTTGTAGAAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCLQTHS*PCRRHR
Trigger: CCGATGCCTTCTACAAGGCCAAGAATGAGTTTGCAG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCAAGGCAGGTAGCCAATaGGTGATTTCTTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCKAGSQ*VISCSW
Trigger: CCAAGAGCAAGAAATCACCCATTGGCTACCTGCCTT...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCAGGTAGCCAATGGGTaGTTTCTTGCTCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCQVANG*FLALGK
Trigger: TTTTCCAAGAGCAAGAAATCACCCATTGGCTACCTG...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTTCAGGTCCCAGTCCATaGTGTACAGCTCATATTTCC +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSISGPSP*CTAHIS
Trigger: GGAAATATGAGCTGTACAGCATGGACTGGGACCTGA...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGTATATATCGAGCACTaGCCTCACACTAGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: YLKPDSPATMPPLLSIALVYIEH*PHTSSF
Trigger: AAAGCTGCTAGTGTGAGGCCAGTGCTCGATATATAC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCTGCAAACTCATTCTTaGCCTTGTAGAAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSILQTHS*PCRRHR
Trigger: CCGATGCCTTCTACAAGGCCAAGAATGAGTTTGCAG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTAAGGCAGGTAGCCAATaGGTGATTTCTTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIKAGSQ*VISCSW
Trigger: CCAAGAGCAAGAAATCACCCATTGGCTACCTGCCTT...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTTGAGATGTACAGGATaGACTCCTCACTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIALRCTG*TPHFFW
Trigger: CCAGAAGAAGTGAGGAGTCCATCCTGTACATCTCAA...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR TCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGATTCCGAAGGGTCATaGAAAAATCTCCTCGGTTCA +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIDSEGS*KNLLGS
Trigger: TGAACCGAGGAGATTTTTTCATGACCCTTCGGAATC...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTTTGAGATGTACAGGATaGACTCCTCACTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSILRCTG*TPHFFW
Trigger: CCAGAAGAAGTGAGGAGTCCATCCTGTACATCTCAA...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGTGATTTCTTGCTCTTaGAAAACTTCTCTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSVISCS*KTSLAL
Trigger: AAGAGCTAGAGAAGTTTTCCAAGAGCAAGAAATCAC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGTGATTTCTTGCTCTTaGAAAACTTCTCTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAVISCS*KTSLAL
Trigger: AAGAGCTAGAGAAGTTTTCCAAGAGCAAGAAATCAC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CCA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGGGAAGCATACTTCTTaGCTTCGTATTTGTTATGTT +
Preference number: 4 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSGKHTS*LRICYV
Trigger: AACATAACAAATACGAAGCCAAGAAGTATGCTTCCC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR GCA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCAATGGGTGATTTCTTaGTCTTGGAAAACTTCTCTA +
Preference number: 4 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIQWVIS*SWKTSL
Trigger: TAGAGAAGTTTTCCAAGAGCAAGAAATCACCCATTG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS CCA 90 bp GCCTCAATGCACTGCTGCACGGCCTGGGTCAGCTGGCCCAGCTCCTaGATCTCCCGCAGGTACTCGCTGGCCGCTGGAACCTCATGCAGG +
Preference number: 5 (lower is better)
Translates to: ASMHCCTAWVSWPSS*ISRRYSLAAGTSCR
Trigger: CCTGCATGAGGTTCCAGCGGCCAGCGAGTACCTGCGGGAGATCCAGGAGCTGGGCCAGCTGACCCAGGCCGTGCAGCAGTGCATTGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481812.4
CDS CCA 90 bp AGGCAGAGTCCCCGAGTGGGTTCCAGTTCGCCGTGTAGCAGTCCATaGCTGGTGCAGACGGCAGCTGGGAAGCACCGAGGGGACACCCAC +
Preference number: 5 (lower is better)
Translates to: RQSPRVGSSSPCSSP*LVQTAAGKHRGDTH
Trigger: GTGGGTGTCCCCTCGGTGCTTCCCAGCTGCCGTCTGCACCAGCCATGGACTGCTACACGGCGAACTGGAACCCACTCGGGGACTCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380469.7
CDS CCA 90 bp TCCCGCAGGTACTCGCTGGCCGCTGGAACCTCATGCAGGAACTCGTaGGTGCTGCGGGAGAAGATGCGGACCCCATCGAGCTCAGGCACC +
Preference number: 5 (lower is better)
Translates to: SRRYSLAAGTSCRNS*VLREKMRTPSSSGT
Trigger: GGTGCCTGAGCTCGATGGGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGGCCAGCGAGTACCTGCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481812.4
CDS GCA 90 bp CCCTCCCCGGCCCGGCCATCCAGGCCAACCCTGAGCAGACTCTTCTaGATGTCTGGCTGGTGCTCATGTCCTGCAGCCTCAATGCACTGC +
Preference number: 5 (lower is better)
Translates to: PSPARPSRPTLSRLF*MSGWCSCPAASMHC
Trigger: GCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGTTGGCCTGGATGGCCGGGCCGGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS GCA 90 bp GGTACTCGCTGGCCGCTGGAACCTCATGCAGGAACTCGTGGGTGCTaGGGGAGAAGATGCGGACCCCATCGAGCTCAGGCACCAGGTAGG +
Preference number: 5 (lower is better)
Translates to: GTRWPLEPHAGTRGC*GRRCGPHRAQAPGR
Trigger: CCTACCTGGTGCCTGAGCTCGATGGGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGGCCAGCGAGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481812.4
CDS GCA 90 bp GCAGGTACTCGCTGGCCGCTGGAACCTCATGCAGGAACTCGTGGGTaGTGCGGGAGAAGATGCGGACCCCATCGAGCTCAGGCACCAGGT +
Preference number: 5 (lower is better)
Translates to: AGTRWPLEPHAGTRG*CGRRCGPHRAQAPG
Trigger: ACCTGGTGCCTGAGCTCGATGGGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGGCCAGCGAGTACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481812.4
CDS CCA 90 bp GCCTCAATGCACTGCTGCACGGCCTGGGTCAGCTGGCCCAGCTCCTaGATCTCCCGCAGGTACTCGTCCGCCTTCTGGCTCTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: ASMHCCTAWVSWPSS*ISRRYSSAFWLSFW
Trigger: CCAGAAAGAGAGCCAGAAGGCGGACGAGTACCTGCGGGAGATCCAGGAGCTGGGCCAGCTGACCCAGGCCGTGCAGCAGTGCATTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS GCA 90 bp TTTCCTCGCTGGCCGCTGGAACCTCATGCAGGAACTCGTGGGTGCTaGGGGAGAAGATGCGGACCCCATCGAGCTCAGGCACCAGGTAGG +
Preference number: 5 (lower is better)
Translates to: FPRWPLEPHAGTRGC*GRRCGPHRAQAPGR
Trigger: CCTACCTGGTGCCTGAGCTCGATGGGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGGCCAGCGAGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000417508.1
CDS GCA 90 bp CCGAAGGAGGCGGCCCTGAGCAGACTCTTCTGCATGTCTGGCTGGTaGTCATGTCCTGCAGCCTCAATGCACTGCTGCACGGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: PKEAALSRLFCMSGW*SCPAASMHCCTAWV
Trigger: GACCCAGGCCGTGCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGCCGCCTCCTTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000481812.4
CDS CCA 90 bp GCCTCAATGCACTGCTGCACGGCCTGGGTCAGCTGGCCCAGCTCCTaGATCTCCCGCAGGTACTCGTCCGCCTTCTGGCTCTCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: ASMHCCTAWVSWPSS*ISRRYSSAFWLSFS
Trigger: TGAGAAAGAGAGCCAGAAGGCGGACGAGTACCTGCGGGAGATCCAGGAGCTGGGCCAGCTGACCCAGGCCGTGCAGCAGTGCATTGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS CCA 90 bp AGCTGGCCCAGCTCCTGGATCTCCCGCAGGTACTCGTCCGCCTTCTaGCTCTCTTTCTGGTGGGGAGCAGTCCAGAGCCAGGGCATCATG +
Preference number: 5 (lower is better)
Translates to: SWPSSWISRRYSSAF*LSFWWGAVQSQGIM
Trigger: CATGATGCCCTGGCTCTGGACTGCTCCCCACCAGAAAGAGAGCCAGAAGGCGGACGAGTACCTGCGGGAGATCCAGGAGCTGGGCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS CCA 90 bp GGCCCGGCCATCCAGGCCAACCCTGAGCAGACTCTTCTGCATGTCTaGCTGGTGCTCATGTCCTGCAGCCTCAATGCACTGCTGCACGGC +
Preference number: 5 (lower is better)
Translates to: GPAIQANPEQTLLHV*LVLMSCSLNALLHG
Trigger: GCCGTGCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGTTGGCCTGGATGGCCGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS-3UTR CAA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAGCAGGAGGGTGCACTTaGCAGACCTGGCACCTCTGG +
Preference number: 5 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGAGGCT*QTWHLW
Trigger: CCAGAGGTGCCAGGTCTGCAAAGTGCACCCTCCTGC...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS GCA 90 bp CCGCTGGAACCTCATGCAGGAACTCGTGGGTGCTGCGGGAGAAGATaGGGACCCCATCGAGCTCAGGCACCAGGTAGGAGTCCTCATCCA +
Preference number: 5 (lower is better)
Translates to: PLEPHAGTRGCCGRR*GPHRAQAPGRSPHP
Trigger: TGGATGAGGACTCCTACCTGGTGCCTGAGCTCGATGGGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380445.8
ENST00000417508.1
ENST00000481812.4
CDS GCA 90 bp AGATTTCCTCGCTGGCCGCTGGAACCTCATGCAGGAACTCGTGGGTaGTGCGGGAGAAGATGCGGACCCCATCGAGCTCAGGCACCAGGT +
Preference number: 5 (lower is better)
Translates to: RFPRWPLEPHAGTRG*CGRRCGPHRAQAPG
Trigger: ACCTGGTGCCTGAGCTCGATGGGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGGCCAGCGAGGAAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000417508.1
CDS CCA 90 bp CGGCCATCCAGGCCAACCCTGAGCAGACTCTTCTGCATGTCTGGCTaGTGCTCATGTCCTGCAGCCTCAATGCACTGCTGCACGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RPSRPTLSRLFCMSG*CSCPAASMHCCTAW
Trigger: CCAGGCCGTGCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGTTGGCCTGGATGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS GCA 90 bp CAGCAGCTTGATGGCCAGCTCCGTGCGGCCACAACCATAGGCTCGTaGAGCAATGTCGGAGTAAGAGACACCAGGCGTGTCCCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: QQLDGQLRAATTIGS*SNVGVRDTRRVPQL
Trigger: AAGCTGGGGGACACGCCTGGTGTCTCTTACTCCGACATTGCTGCACGAGCCTATGGTTGTGGCCGCACGGAGCTGGCCATCAAGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000481812.4
CDS GCA 90 bp CCATCCAGGCCAACCCTGAGCAGACTCTTCTGCATGTCTGGCTGGTaGTCATGTCCTGCAGCCTCAATGCACTGCTGCACGGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: PSRPTLSRLFCMSGW*SCPAASMHCCTAWV
Trigger: GACCCAGGCCGTGCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGTTGGCCTGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS GCA 90 bp CCACACCTTGATGGCCAGCTCCGTGCGGCCACAACCATAGGCTCGTaGAGCAATGTCGGAGTAAGAGACACCAGGCGTGTCCCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: PHLDGQLRAATTIGS*SNVGVRDTRRVPQL
Trigger: AAGCTGGGGGACACGCCTGGTGTCTCTTACTCCGACATTGCTGCACGAGCCTATGGTTGTGGCCGCACGGAGCTGGCCATCAAGGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487461.1
CDS CCA 90 bp TTTCCGAAGGAGGCGGCCCTGAGCAGACTCTTCTGCATGTCTGGCTaGTGCTCATGTCCTGCAGCCTCAATGCACTGCTGCACGGCCTGG +
Preference number: 5 (lower is better)
Translates to: FPKEAALSRLFCMSG*CSCPAASMHCCTAW
Trigger: CCAGGCCGTGCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGCCGCCTCCTTCGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000481812.4
CDS-3UTR CAA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGAACCAGACCATCTGCTTaGGAGGTGCCCGGATGTTGC +
Preference number: 5 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGTRPSA*EVPGCC
Trigger: GCAACATCCGGGCACCTCCAAAGCAGATGGTCTGGT...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp ACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGGGAGGACCGCTCTCGATGGCCTaGCTTAGTGCCAGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: TRQPCYHAPAPQHCSRGGPLSMA*LSASLL
Trigger: GAGCAAACTGGCACTAAGCAAGGCCATCGAGAGCGG...TCCTCCCCTAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS TCA 90 bp AACAACCACATCAGAGTGTCTGTGGAGGGCTGGGCACCCACACCTTaGTGGCCAGCTCCGTGCGGCCACAACCATAGGCTCGTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: NNHIRVSVEGWAPTP*WPAPCGHNHRLVQQ
Trigger: TTGCTGCACGAGCCTATGGTTGTGGCCGCACGGAGCTGGCCATCAAGGTGTGGGTGCCCAGCCCTCCACAGACACTCTGATGTGGTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487461.1
CDS CCA 90 bp CTTGTGCCCTGGCCCGTTGAATCTTGTCAGCTGTGGCCCCATCTGTaGCTCCCGTGCAGTGGGACAATACGAGGCTCAGCTCAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: LVPWPVESCQLWPHL*LPCSGTIRGSAQPH
Trigger: ATGAGGCTGAGCTGAGCCTCGTATTGTCCCACTGCACGGGAGCCACAGATGGGGCCACAGCTGACAAGATTCAACGGGCCAGGGCACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS TCA 90 bp CGGTGGGCCCCTGTGAGGATGGCCACTCCGGAACCAAACTCAGTGTaGAAGATCCGGGCATCCAGAACCCGGTTCTGGAGCACTTCATTG +
Preference number: 5 (lower is better)
Translates to: RWAPVRMATPEPNSV*KIRASRTRFWSTSL
Trigger: CAATGAAGTGCTCCAGAACCGGGTTCTGGATGCCCGGATCTTTCACACTGAGTTTGGTTCCGGAGTGGCCATCCTCACAGGGGCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS TCA 90 bp TCGGGTGGAAATCTGTCCAGGAAACACTTTCCGAAGGAGGCGGCCTaGGAAGAGCCAGAGGGCGATAGGAGAGAGCTTCCCTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: SGGNLSRKHFPKEAA*EEPEGDRRELPCCP
Trigger: TGGGCAGCAGGGAAGCTCTCTCCTATCGCCCTCTGGCTCTTCTCAGGCCGCCTCCTTCGGAAAGTGTTTCCTGGACAGATTTCCACCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS TCA 90 bp CGGTGGGCCCCTGTGAGGATGGCCACTCCGGAACCAAACTCAGTGTaGAAGATCCGGGCATCCAGAACCCGGTTCTGGAGCACTTCCAAT +
Preference number: 5 (lower is better)
Translates to: RWAPVRMATPEPNSV*KIRASRTRFWSTSN
Trigger: ATTGGAAGTGCTCCAGAACCGGGTTCTGGATGCCCGGATCTTTCACACTGAGTTTGGTTCCGGAGTGGCCATCCTCACAGGGGCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417508.1
ENST00000453689.5
CDS GCA 90 bp ATGGTCCAAGAGGTAAAGGTCAGGCCCCACAGCCAGAAGAATGTGTaGCACTCGGTCCTGGCACAGCACAGTCCAGCAGGAGGGTGCACT +
Preference number: 5 (lower is better)
Translates to: MVQEVKVRPHSQKNV*HSVLAQHSPAGGCT
Trigger: AGTGCACCCTCCTGCTGGACTGTGCTGTGCCAGGACCGAGTGGCACACATTCTTCTGGCTGTGGGGCCTGACCTTTACCTCTTGGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000417508.1
ENST00000453689.5
CDS GCA 90 bp CAGCTTCAGCCACCAGAGCCTCTTGTCAGGGATGCGGAAGTCACGTaGCAGCTGCTCTGCACGCTTGTTGTGACCGCCAAGAATGAGGGT +
Preference number: 5 (lower is better)
Translates to: QLQPPEPLVRDAEVT*QLLCTLVVTAKNEG
Trigger: ACCCTCATTCTTGGCGGTCACAACAAGCGTGCAGAGCAGCTGGCACGTGACTTCCGCATCCCTGACAAGAGGCTCTGGTGGCTGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS CCA 90 bp CAGGCTGGCCAGAGGCATGCCGGAAGCAGAGTATATATCGAGCACTaGCCTCACACTAGCAGCTTTCTCCTTCCGCCAGGGGTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: QAGQRHAGSRVYIEH*PHTSSFLLPPGVPQ
Trigger: CTGAGGAACCCCTGGCGGAAGGAGAAAGCTGCTAGTGTGAGGCCAGTGCTCGATATATACTCTGCTTCCGGCATGCCTCTGGCCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS CCA 90 bp ACTTCTTCTGGGCTTGTGCCCTGGCCCGTTGAATCTTGTCAGCTGTaGCCCCATCTGTGGCTCCCGTGCAGTGGGACAATACGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: TSSGLVPWPVESCQL*PHLWLPCSGTIRGS
Trigger: TGAGCCTCGTATTGTCCCACTGCACGGGAGCCACAGATGGGGCCACAGCTGACAAGATTCAACGGGCCAGGGCACAAGCCCAGAAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS TCA 90 bp GTGCAATGGGGCCCCCATAGGGTGCAGCAGCCACCAGGCAATCCCTaGGTTCCTCCTTCAGGTCCCAGTCCATGCTGTACAGCTCATATT +
Preference number: 5 (lower is better)
Translates to: VQWGPHRVQQPPGNP*VPPSGPSPCCTAHI
Trigger: AATATGAGCTGTACAGCATGGACTGGGACCTGAAGGAGGAACTCAGGGATTGCCTGGTGGCTGCTGCACCCTATGGGGGCCCCATTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS TCA 90 bp CCTTCTGTTGCACCTTGTAGCAGGCCCAGTGGGCCAGGATCCTGCTaGCGCCCTGTACTTCAGGAAGGCGCAAGTACTCGCATATCTGGA +
Preference number: 5 (lower is better)
Translates to: PSVAPCSRPSGPGSC*RPVLQEGASTRISG
Trigger: TCCAGATATGCGAGTACTTGCGCCTTCCTGAAGTACAGGGCGTCAGCAGGATCCTGGCCCACTGGGCCTGCTACAAGGTGCAACAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000453689.5
ENST00000481812.4
CDS GCA 90 bp CTCATTCTTGGCCTTGTAGAAGGCATCGGCGGCTGTCTGCAGAGCTaGTACTCGCCCCTCAATACGCTCTTCTGCAGCATAGCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: LILGLVEGIGGCLQS*YSPLNTLFCSIAGS
Trigger: CGAGCCAGCTATGCTGCAGAAGAGCGTATTGAGGGGCGAGTAGCAGCTCTGCAGACAGCCGCCGATGCCTTCTACAAGGCCAAGAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS GCA 90 bp CCAGAGCCTCTTGTCAGGGATGCGGAAGTCACGTGCCAGCTGCTCTaGACGCTTGTTGTGACCGCCAAGAATGAGGGTGGTAACTGTGTC +
Preference number: 5 (lower is better)
Translates to: PEPLVRDAEVTCQLL*TLVVTAKNEGGNCV
Trigger: GACACAGTTACCACCCTCATTCTTGGCGGTCACAACAAGCGTGCAGAGCAGCTGGCACGTGACTTCCGCATCCCTGACAAGAGGCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACCACGGCCCTCTCCTaGCTACGAGGACGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSTTALS*LRGRLH
Trigger: GTGCAGCCGTCCTCGTAGCAAGGAGAGGGCCGTGGT...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTACCACGGCCCTCTCCTaGCTACGAGGACGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LYLKPDSPATMPPLLSIATTALS*LRGRLH
Trigger: GTGCAGCCGTCCTCGTAGCAAGGAGAGGGCCGTGGT...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS TCA 90 bp TTCCAATGGGGCCCCCATAGGGTGCAGCAGCCACCAGGCAATCCCTaGGTTCCTCCTTCAGGTCCCAGTCCATGCTGTACAGCTCATATT +
Preference number: 5 (lower is better)
Translates to: FQWGPHRVQQPPGNP*VPPSGPSPCCTAHI
Trigger: AATATGAGCTGTACAGCATGGACTGGGACCTGAAGGAGGAACTCAGGGATTGCCTGGTGGCTGCTGCACCCTATGGGGGCCCCATTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417508.1
ENST00000453689.5
CDS CCA 90 bp CATGCTGTACAGCTCATATTTCCGGTAAAAGGCAGAGTCCCCGAGTaGGTTCCAGTTCGCCGTGTAGCAGTCCATGGCTGGTGCAGACGG +
Preference number: 5 (lower is better)
Translates to: HAVQLIFPVKGRVPE*VPVRRVAVHGWCRR
Trigger: CCGTCTGCACCAGCCATGGACTGCTACACGGCGAACTGGAACCCACTCGGGGACTCTGCCTTTTACCGGAAATATGAGCTGTACAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000453689.5
CDS CCA 90 bp ATTGAGCACACGCAGGTCCTGACACATGTGCACGAAGCTGTCGGGTaGAAATCTGTCCAGGAAACACTTTCCGAAGGAGGCGGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: IEHTQVLTHVHEAVG*KSVQETLSEGGGPE
Trigger: CTCAGGGCCGCCTCCTTCGGAAAGTGTTTCCTGGACAGATTTCCACCCGACAGCTTCGTGCACATGTGTCAGGACCTGCGTGTGCTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000481812.4
CDS TCA 90 bp TCAGGGATGCGGAAGTCACGTGCCAGCTGCTCTGCACGCTTGTTGTaGCCGCCAAGAATGAGGGTGGTAACTGTGTCATGTAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: SGMRKSRASCSARLL*PPRMRVVTVSCRDR
Trigger: CCTGTCTCTACATGACACAGTTACCACCCTCATTCTTGGCGGTCACAACAAGCGTGCAGAGCAGCTGGCACGTGACTTCCGCATCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS GCA 90 bp CTTAGTGCCAGTTTGCTCCTCTTCATCTTTAGGAGAAGGGGTACCTaGTCCCCTGAGCGTGGCTCATACTCCAGCAGCTTGATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LSASLLLFIFRRRGT*SPERGSYSSSLMAS
Trigger: GCTGGCCATCAAGCTGCTGGAGTATGAGCCACGCTCAGGGGAGCAGGTACCCCTTCTCCTAAAGATGAAGAGGAGCAAACTGGCACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS GCA 90 bp TTGCTTGAGATGTACAGGATGGACTCCTCACTTCTTCTGGGCTTGTaGCCTGGCCCGTTGAATCTTGTCAGCTGTGGCCCCATCTGTGGC +
Preference number: 5 (lower is better)
Translates to: LLEMYRMDSSLLLGL*PGPLNLVSCGPICG
Trigger: GCCACAGATGGGGCCACAGCTGACAAGATTCAACGGGCCAGGGCACAAGCCCAGAAGAAGTGAGGAGTCCATCCTGTACATCTCAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS CCA 90 bp ATTGAGCACACGCAGGTCCTGACACATGTGCACGAAGCTGTCGGGTaGAAATCTGTCCAGGAAACACTTTCCGAAGGAGGCGGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: IEHTQVLTHVHEAVG*KSVQETLSEGGGLR
Trigger: TCTCAGGCCGCCTCCTTCGGAAAGTGTTTCCTGGACAGATTTCCACCCGACAGCTTCGTGCACATGTGTCAGGACCTGCGTGTGCTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS-3UTR CAA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCGGCATCCGGCGGAGTTaGAGGTCACCCACATTGGCA +
Preference number: 5 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCGIRRS*RSPTLA
Trigger: TGCCAATGTGGGTGACCTCAAACTCCGCCGGATGCC...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGGCATCCGGCGGAGTTaGAGGTCACCCACATTGGCA +
Preference number: 5 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSGIRRS*RSPTLA
Trigger: TGCCAATGTGGGTGACCTCAAACTCCGCCGGATGCC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTATCATACTCCAGCAGCTaGATGGCCAGCTCCGTGCGG +
Preference number: 5 (lower is better)
Translates to: YLKPDSPATMPPLLSIALSYSSS*MASSVR
Trigger: CCGCACGGAGCTGGCCATCAAGCTGCTGGAGTATGA...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS GCA 90 bp CTTAGTGCCAGTTTGCTCCTCTTCATCTTTAGGAGAAGGGGTACCTaGTCCCCTGAGCGTGGCTCATACTCCAGCAGCTGTGAGGTGAGA +
Preference number: 5 (lower is better)
Translates to: LSASLLLFIFRRRGT*SPERGSYSSSCEVR
Trigger: TCTCACCTCACAGCTGCTGGAGTATGAGCCACGCTCAGGGGAGCAGGTACCCCTTCTCCTAAAGATGAAGAGGAGCAAACTGGCACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487461.1
CDS-3UTR CAA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAACCAGACCATCTGCTTaGGAGGTGCCCGGATGTTGC +
Preference number: 5 (lower is better)
Translates to: YLKPDSPATMPPLLSIALTRPSA*EVPGCC
Trigger: GCAACATCCGGGCACCTCCAAAGCAGATGGTCTGGT...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTACCGCTCTCGATGGCCTaGCTTAGTGCCAGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: YLKPDSPATMPPLLSIALPLSMA*LSASLL
Trigger: GAGCAAACTGGCACTAAGCAAGGCCATCGAGAGCGG...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTAGCCACCAGAGCCTCTaGTCAGGGATGCGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LYLKPDSPATMPPLLSIASHQSL*SGMRKS
Trigger: TGACTTCCGCATCCCTGACAAGAGGCTCTGGTGGCT...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTTTGTGCCCTGGCCCGTaGAATCTTGTCAGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSLCPGP*NLVSCG
Trigger: GCCACAGCTGACAAGATTCAACGGGCCAGGGCACAA...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCGGAGGTGCCCGGATGTaGCAGTTGAACTCACATAGC +
Preference number: 5 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCGGARM*QLNSHS
Trigger: GCTATGTGAGTTCAACTGCAACATCCGGGCACCTCC...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTAGCCACCAGAGCCTCTaGTCAGGGATGCGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: QLYLKPDSPATMPPLLSISHQSL*SGMRKS
Trigger: TGACTTCCGCATCCCTGACAAGAGGCTCTGGTGGCT...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTTTGTGCCCTGGCCCGTaGAATCTTGTCAGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: QLYLKPDSPATMPPLLSILCPGP*NLVSCG
Trigger: GCCACAGCTGACAAGATTCAACGGGCCAGGGCACAA...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTTCACTTCTTCTGGGCTaGTGCCCTGGCCCGTTGAAT +
Preference number: 5 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSSLLLG*CPGPLN
Trigger: ATTCAACGGGCCAGGGCACAAGCCCAGAAGAAGTGA...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCACTTCTTCTGGGCTaGTGCCCTGGCCCGTTGAAT +
Preference number: 5 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCSLLLG*CPGPLN
Trigger: ATTCAACGGGCCAGGGCACAAGCCCAGAAGAAGTGA...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTGCCCGGATGTTGCAGTaGAACTCACATAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LYLKPDSPATMPPLLSIAARMLQ*NSHSFS
Trigger: GGAGAAGCTATGTGAGTTCAACTGCAACATCCGGGC...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTACAAGAAGCAAAGCCTaGACCTTCTGCTCGGGACCC +
Preference number: 5 (lower is better)
Translates to: QLYLKPDSPATMPPLLSITRSKA*TFCSGP
Trigger: GGGTCCCGAGCAGAAGGTCAAGGCTTTGCTTCTTGT...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGAGGAACCCCTTGCTaGAGATGTACAGGATGGACT +
Preference number: 5 (lower is better)
Translates to: YLKPDSPATMPPLLSIALGGTPC*RCTGWT
Trigger: AGTCCATCCTGTACATCTCAAGCAAGGGGTTCCTCC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTAGGTGAGCTGCTTATATaGGATGCTCTCGGGTGCATC +
Preference number: 5 (lower is better)
Translates to: YLKPDSPATMPPLLSIALGELLI*DALGCI
Trigger: GATGCACCCGAGAGCATCCAATATAAGCAGCTCACC...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380469.7
CDS-3UTR CAA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTCTGGAGCACTTCATaGCCCATGCTGAAGTGTCTC +
Preference number: 5 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCFWSTS*PMLKCL
Trigger: GAGACACTTCAGCATGGGCAATGAAGTGCTCCAGAA...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCACATAGCTTCTCCTaGAGTGATGCTGTCCCCATC +
Preference number: 5 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCSHSFS*SDAVPI
Trigger: GATGGGGACAGCATCACTCAAGGAGAAGCTATGTGA...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCCCGGATGTTGCAGTaGAACTCACATAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIARMLQ*NSHSFS
Trigger: GGAGAAGCTATGTGAGTTCAACTGCAACATCCGGGC...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp TTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTGCCATTGAGGCAATTTaGAAGATTTCCTCGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LFKTRQPCYHAPAPQHCSAIEAI*KISSLA
Trigger: GGCCAGCGAGGAAATCTTCAAAATTGCCTCAATGGC...AGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS-3UTR CAA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCGGTGAGCTGCTTATATaGGCTATAGGTGAGCGGGAT +
Preference number: 5 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCGELLI*AIGERD
Trigger: ATCCCGCTCACCTATAGCCAATATAAGCAGCTCACC...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380445.8
CDS GCA 90 bp CCTCAATACGCTCTTCTGCAGCATAGCTGGCTCGGATGTGGAAGCTaGCCAATTCCTGGTGATTGTCATCCTGATTGTAAAGGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: PQYALLQHSWLGCGS*PIPGDCHPDCKGPS
Trigger: TGAAGGACCTTTACAATCAGGATGACAATCACCAGGAATTGGGCAGCTTCCACATCCGAGCCAGCTATGCTGCAGAAGAGCGTATTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000487461.1
CDS-3UTR CAA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTTTCTGGAGCACTTCATaGCCCATGCTGAAGTGTCTC +
Preference number: 5 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIFWSTS*PMLKCL
Trigger: GAGACACTTCAGCATGGGCAATGAAGTGCTCCAGAA...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTTCACATAGCTTCTCCTaGAGTGATGCTGTCCCCATC +
Preference number: 5 (lower is better)
Translates to: QLYLKPDSPATMPPLLSISHSFS*SDAVPI
Trigger: GATGGGGACAGCATCACTCAAGGAGAAGCTATGTGA...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp TATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTCTATTGCTTAGTGCCAGTTaGCTCCTCTTCATCTTTAGG +
Preference number: 5 (lower is better)
Translates to: YLKPDSPATMPPLLSIALLLSAS*LLFIFR
Trigger: CCTAAAGATGAAGAGGAGCAAACTGGCACTAAGCAA...TAGAGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp CTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTTGCTTAGTGCCAGTTaGCTCCTCTTCATCTTTAGG +
Preference number: 5 (lower is better)
Translates to: LYLKPDSPATMPPLLSIALLSAS*LLFIFR
Trigger: CCTAAAGATGAAGAGGAGCAAACTGGCACTAAGCAA...AGCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS CCA 90 bp AGATCTCCACAAAAGGCAGGTAGCCAATGGGTGATTTCTTGCTCTTaGAAAACTTCTCTAGCTCTTCCCAATCTTCCAAATCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: RSPQKAGSQWVISCS*KTSLALPNLPNLPG
Trigger: CCCTGGCAGATTTGGAAGATTGGGAAGAGCTAGAGAAGTTTTCCAAGAGCAAGAAATCACCCATTGGCTACCTGCCTTTTGTGGAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTCGGGAAGCATACTTCTaGGCTTCGTATTTGTTATGT +
Preference number: 5 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIREAYF*ASYLLC
Trigger: ACATAACAAATACGAAGCCAAGAAGTATGCTTCCCG...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS-3UTR CAA 90 bp ACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTGCTTCTTGGCTTCGTATTaGTTATGTTGTTTCATGCAG +
Preference number: 5 (lower is better)
Translates to: TLFKTRQPCYHAPAPQHCFLASY*LCCFMQ
Trigger: CTGCATGAAACAACATAACAAATACGAAGCCAAGAA...GCAATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS GCA 90 bp TCATGCAGATCTCCACAAAAGGCAGGTAGCCAATGGGTGATTTCTTaGTCTTGGAAAACTTCTCTAGCTCTTCCCAATCTTCCAAATCTG +
Preference number: 5 (lower is better)
Translates to: SCRSPQKAGSQWVIS*SWKTSLALPNLPNL
Trigger: CAGATTTGGAAGATTGGGAAGAGCTAGAGAAGTTTTCCAAGAGCAAGAAATCACCCATTGGCTACCTGCCTTTTGTGGAGATCTGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS GCA 90 bp TCTATATGTATACACCCGTCAGTACATATAATCCCCCAACCCCCATaGACAGACAGTTGTGATCTCAACATTCTTAGGGCAGAAATCACC +
Preference number: 5 (lower is better)
Translates to: SICIHPSVHIIPQPP*TDSCDLNILRAEIT
Trigger: GGTGATTTCTGCCCTAAGAATGTTGAGATCACAACTGTCTGTGCATGGGGGTTGGGGGATTATATGTACTGACGGGTGTATACATATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466415.1
CDS-3UTR CAA 90 bp CAACTTTATTTAAAACCAGACAGCCCTGCTACCATGCCCCCGCTCCTCAGCATTTTCTTGGCTTCGTATTaGTTATGTTGTTTCATGCAG +
Preference number: 5 (lower is better)
Translates to: QLYLKPDSPATMPPLLSIFLASY*LCCFMQ
Trigger: CTGCATGAAACAACATAACAAATACGAAGCCAAGAA...AATGCTGAGGAGCGGGGGCATGGTAGCAGGGCTGTCTGGTTTTAAATAAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS TCA 72 bp CCCCACCCTCCCCGGCCCGGCCATCCAGGCCAACCCTaGGCAGACTCTTCTGCATGTCTGGCTGGTGCTCAT +
Preference number: 6 (lower is better)
Translates to: PHPPRPGHPGQP*ADSSACLAGAH
Trigger: ATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGTTGGCCTGGATGGCCGGGCCGGGGAGGGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS CCA 72 bp CCCCGAGTGGGTTCCAGTTCGCCGTGTAGCAGTCCATaGCTGGTGCAGACGGCAGCTGGGAAGCACCGAGGG +
Preference number: 6 (lower is better)
Translates to: PRVGSSSPCSSP*LVQTAAGKHRG
Trigger: CCCTCGGTGCTTCCCAGCTGCCGTCTGCACCAGCCATGGACTGCTACACGGCGAACTGGAACCCACTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380469.7
CDS GCA 72 bp GCCGCCTTTCCCAGGCCACCACCACGGCCCTCTCCTTaGTACGAGGACGGCTGCACCAGACCATCTGCTTTG +
Preference number: 6 (lower is better)
Translates to: AAFPRPPPRPSP*YEDGCTRPSAL
Trigger: CAAAGCAGATGGTCTGGTGCAGCCGTCCTCGTAGCAAGGAGAGGGCCGTGGTGGTGGCCTGGGAAAGGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000417508.1
ENST00000453689.5
ENST00000481812.4
CDS GCA 72 bp CGCTGGCCGCTGGAACCTCATGCAGGAACTCGTGGGTaGTGCGGGAGAAGATGCGGACCCCATCGAGCTCAG +
Preference number: 6 (lower is better)
Translates to: RWPLEPHAGTRG*CGRRCGPHRAQ
Trigger: CTGAGCTCGATGGGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGGCCAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380445.8
ENST00000417508.1
ENST00000481812.4
CDS GCA 72 bp TGGGTTCCAGTTCGCCGTGTAGCAGTCCATGGCTGGTaGAGACGGCAGCTGGGAAGCACCGAGGGGACACCC +
Preference number: 6 (lower is better)
Translates to: WVPVRRVAVHGW*RRQLGSTEGTP
Trigger: GGGTGTCCCCTCGGTGCTTCCCAGCTGCCGTCTGCACCAGCCATGGACTGCTACACGGCGAACTGGAACCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380469.7
CDS CCA 72 bp TCCTCGCTGGCCGCTGGAACCTCATGCAGGAACTCGTaGGTGCTGCGGGAGAAGATGCGGACCCCATCGAGC +
Preference number: 6 (lower is better)
Translates to: SSLAAGTSCRNS*VLREKMRTPSS
Trigger: GCTCGATGGGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGGCCAGCGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000417508.1
CDS GCA 72 bp TGGCCGCTGGAACCTCATGCAGGAACTCGTGGGTGCTaGGGGAGAAGATGCGGACCCCATCGAGCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: WPLEPHAGTRGC*GRRCGPHRAQA
Trigger: TGCCTGAGCTCGATGGGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380445.8
ENST00000417508.1
ENST00000481812.4
CDS GCA 72 bp ATCTCCCGCAGGTACTCGCTGGCCGCTGGAACCTCATaGAGGAACTCGTGGGTGCTGCGGGAGAAGATGCGG +
Preference number: 6 (lower is better)
Translates to: ISRRYSLAAGTS*RNSWVLREKMR
Trigger: CCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGGCCAGCGAGTACCTGCGGGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481812.4
CDS CCA 72 bp GAGTGGGTTCCAGTTCGCCGTGTAGCAGTCCATGGCTaGTGCAGACGGCAGCTGGGAAGCACCGAGGGGACA +
Preference number: 6 (lower is better)
Translates to: EWVPVRRVAVHG*CRRQLGSTEGT
Trigger: TGTCCCCTCGGTGCTTCCCAGCTGCCGTCTGCACCAGCCATGGACTGCTACACGGCGAACTGGAACCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380469.7
CDS CCA 72 bp TACTCGCTGGCCGCTGGAACCTCATGCAGGAACTCGTaGGTGCTGCGGGAGAAGATGCGGACCCCATCGAGC +
Preference number: 6 (lower is better)
Translates to: YSLAAGTSCRNS*VLREKMRTPSS
Trigger: GCTCGATGGGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGGTTCCAGCGGCCAGCGAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481812.4
CDS CAA 72 bp AGCCGCCTTTCCCAGGCCACCACCACGGCCCTCTCCTaGCTACGAGGACGGCTGCACCAGACCATCTGCTTT +
Preference number: 6 (lower is better)
Translates to: SRLSQATTTALS*LRGRLHQTICF
Trigger: AAAGCAGATGGTCTGGTGCAGCCGTCCTCGTAGCAAGGAGAGGGCCGTGGTGGTGGCCTGGGAAAGGCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000417508.1
ENST00000453689.5
ENST00000481812.4
CDS CAA 90 bp AGACCTGGCACCTCTGGCATCCGGCGGAGTTTGAGGTCACCCACATaGGCACTGAGGGTGAAGCGGTGGGCCCCTGTGAGGATGGCCACT +
Preference number: 6 (lower is better)
Translates to: RPGTSGIRRSLRSPT*ALRVKRWAPVRMAT
Trigger: AGTGGCCATCCTCACAGGGGCCCACCGCTTCACCCTCAGTGCCAATGTGGGTGACCTCAAACTCCGCCGGATGCCAGAGGTGCCAGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000417508.1
ENST00000453689.5
CDS TCA 72 bp GCACCTTGTAGCAGGCCCAGTGGGCCAGGATCCTGCTaGCGCCCTGTACTTCAGGAAGGCGCAAGTACTCGC +
Preference number: 6 (lower is better)
Translates to: APCSRPSGPGSC*RPVLQEGASTR
Trigger: GCGAGTACTTGCGCCTTCCTGAAGTACAGGGCGTCAGCAGGATCCTGGCCCACTGGGCCTGCTACAAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000453689.5
ENST00000481812.4
CDS TCA 72 bp ATCAGAGTGTCTGTGGAGGGCTGGGCACCCACACCTTaGTGGCCAGCTCCGTGCGGCCACAACCATAGGCTC +
Preference number: 6 (lower is better)
Translates to: IRVSVEGWAPTP*WPAPCGHNHRL
Trigger: GAGCCTATGGTTGTGGCCGCACGGAGCTGGCCATCAAGGTGTGGGTGCCCAGCCCTCCACAGACACTCTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487461.1
CDS GCA 72 bp GGAGTCCTCATCCAGCACAAACTGGATGCTCTCGGGTaGATCGCCCACCACCATCAGCCGCCTTTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: GVLIQHKLDALG*IAHHHQPPFPG
Trigger: GCCTGGGAAAGGCGGCTGATGGTGGTGGGCGATGCACCCGAGAGCATCCAGTTTGTGCTGGATGAGGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380445.8
ENST00000417508.1
ENST00000481812.4
CDS GCA 72 bp CCTCATGCAGGAACTCGTGGGTGCTGCGGGAGAAGATaGGGACCCCATCGAGCTCAGGCACCAGGTAGGAGT +
Preference number: 6 (lower is better)
Translates to: PHAGTRGCCGRR*GPHRAQAPGRS
Trigger: ACTCCTACCTGGTGCCTGAGCTCGATGGGGTCCGCATCTTCTCCCGCAGCACCCACGAGTTCCTGCATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380445.8
ENST00000417508.1
ENST00000481812.4
CDS GCA 72 bp GCCCGGCCATCCAGGCCAACCCTGAGCAGACTCTTCTaGATGTCTGGCTGGTGCTCATGTCCTGCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: ARPSRPTLSRLF*MSGWCSCPAAS
Trigger: TGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGTTGGCCTGGATGGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS CCA 72 bp GGCCCCACAGCCAGAAGAATGTGTGCCACTCGGTCCTaGCACAGCACAGTCCAGCAGGAGGGTGCACTTTGC +
Preference number: 6 (lower is better)
Translates to: GPTARRMCATRS*HSTVQQEGALC
Trigger: GCAAAGTGCACCCTCCTGCTGGACTGTGCTGTGCCAGGACCGAGTGGCACACATTCTTCTGGCTGTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000417508.1
ENST00000453689.5
CDS CCA 72 bp AGCTCCTGGATCTCCCGCAGGTACTCGTCCGCCTTCTaGCTCTCTTTCTGGTGGGGAGCAGTCCAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: SSWISRRYSSAF*LSFWWGAVQSQ
Trigger: CTGGCTCTGGACTGCTCCCCACCAGAAAGAGAGCCAGAAGGCGGACGAGTACCTGCGGGAGATCCAGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS TCA 72 bp GGCCCCCATAGGGTGCAGCAGCCACCAGGCAATCCCTaGGTTCCTCCTTCAGGTCCCAGTCCATGCTGTACA +
Preference number: 6 (lower is better)
Translates to: GPHRVQQPPGNP*VPPSGPSPCCT
Trigger: TGTACAGCATGGACTGGGACCTGAAGGAGGAACTCAGGGATTGCCTGGTGGCTGCTGCACCCTATGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000417508.1
ENST00000453689.5
CDS GCA 72 bp GCGGCCCTGAGCAGACTCTTCTGCATGTCTGGCTGGTaGTCATGTCCTGCAGCCTCAATGCACTGCTGCACG +
Preference number: 6 (lower is better)
Translates to: AALSRLFCMSGW*SCPAASMHCCT
Trigger: CGTGCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000481812.4
CDS GCA 72 bp GATGGCCAGCTCCGTGCGGCCACAACCATAGGCTCGTaGAGCAATGTCGGAGTAAGAGACACCAGGCGTGTC +
Preference number: 6 (lower is better)
Translates to: DGQLRAATTIGS*SNVGVRDTRRV
Trigger: GACACGCCTGGTGTCTCTTACTCCGACATTGCTGCACGAGCCTATGGTTGTGGCCGCACGGAGCTGGCCATC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000453689.5
ENST00000481812.4
ENST00000487461.1
CDS GCA 72 bp CCACCAGAGCCTCTTGTCAGGGATGCGGAAGTCACGTaGCAGCTGCTCTGCACGCTTGTTGTGACCGCCAAG +
Preference number: 6 (lower is better)
Translates to: PPEPLVRDAEVT*QLLCTLVVTAK
Trigger: CTTGGCGGTCACAACAAGCGTGCAGAGCAGCTGGCACGTGACTTCCGCATCCCTGACAAGAGGCTCTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS GCA 72 bp CGGTTCTGGAGCACTTCCAATGGGGCCCCCATAGGGTaGAGCAGCCACCAGGCAATCCCTGAGTTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: RFWSTSNGAPIG*SSHQAIPEFLL
Trigger: AAGGAGGAACTCAGGGATTGCCTGGTGGCTGCTGCACCCTATGGGGGCCCCATTGGAAGTGCTCCAGAACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417508.1
ENST00000453689.5
CDS CCA 72 bp GAGGCGGCCCTGAGCAGACTCTTCTGCATGTCTGGCTaGTGCTCATGTCCTGCAGCCTCAATGCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: EAALSRLFCMSG*CSCPAASMHCC
Trigger: GCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGCCGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000481812.4
CDS GCA 72 bp CGGGTCCACTCTTCCACAGCAGGCTGGCCAGAGGCATaGCGGAAGCAGAGTATATATCGAGCACTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: RVHSSTAGWPEA*RKQSIYRALAS
Trigger: TGAGGCCAGTGCTCGATATATACTCTGCTTCCGGCATGCCTCTGGCCAGCCTGCTGTGGAAGAGTGGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS GCA 72 bp GAGGTAAAGGTCAGGCCCCACAGCCAGAAGAATGTGTaGCACTCGGTCCTGGCACAGCACAGTCCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: EVKVRPHSQKNV*HSVLAQHSPAG
Trigger: TCCTGCTGGACTGTGCTGTGCCAGGACCGAGTGGCACACATTCTTCTGGCTGTGGGGCCTGACCTTTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000417508.1
ENST00000453689.5
CDS GCA 72 bp CTGGATGGTGAGCTGCTTATATTGGATGCTCTCGGGTaGATCGCCCACCACCATCAGCCGCCTTTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: LDGELLILDALG*IAHHHQPPFPG
Trigger: GCCTGGGAAAGGCGGCTGATGGTGGTGGGCGATGCACCCGAGAGCATCCAATATAAGCAGCTCACCATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380469.7
ENST00000453689.5
CDS CCA 72 bp TGGCCCGTTGAATCTTGTCAGCTGTGGCCCCATCTGTaGCTCCCGTGCAGTGGGACAATACGAGGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: WPVESCQLWPHL*LPCSGTIRGSA
Trigger: AGCTGAGCCTCGTATTGTCCCACTGCACGGGAGCCACAGATGGGGCCACAGCTGACAAGATTCAACGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS TCA 72 bp CCTGTGAGGATGGCCACTCCGGAACCAAACTCAGTGTaGAAGATCCGGGCATCCAGAACCCGGTTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: PVRMATPEPNSV*KIRASRTRFWS
Trigger: GCTCCAGAACCGGGTTCTGGATGCCCGGATCTTTCACACTGAGTTTGGTTCCGGAGTGGCCATCCTCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000417508.1
ENST00000453689.5
CDS TCA 72 bp CAGCCTGAGCCACATCGCCAACAAGAAGCAAAGCCTTaGCCTTCTGCTCGGGACCCACGCGGGAAGCATACT +
Preference number: 6 (lower is better)
Translates to: QPEPHRQQEAKP*PSARDPRGKHT
Trigger: AGTATGCTTCCCGCGTGGGTCCCGAGCAGAAGGTCAAGGCTTTGCTTCTTGTTGGCGATGTGGCTCAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS GCA 72 bp CTTGTCAGGGATGCGGAAGTCACGTGCCAGCTGCTCTaGACGCTTGTTGTGACCGCCAAGAATGAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: LVRDAEVTCQLL*TLVVTAKNEGG
Trigger: ACCACCCTCATTCTTGGCGGTCACAACAAGCGTGCAGAGCAGCTGGCACGTGACTTCCGCATCCCTGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS GCA 72 bp CCAACCCTGAGCAGACTCTTCTGCATGTCTGGCTGGTaGTCATGTCCTGCAGCCTCAATGCACTGCTGCACG +
Preference number: 6 (lower is better)
Translates to: PTLSRLFCMSGW*SCPAASMHCCT
Trigger: CGTGCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS CCA 72 bp AGGCCAACCCTGAGCAGACTCTTCTGCATGTCTGGCTaGTGCTCATGTCCTGCAGCCTCAATGCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: RPTLSRLFCMSG*CSCPAASMHCC
Trigger: GCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAGAAGAGTCTGCTCAGGGTTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS CAA 90 bp CGAGGACGGCTGCACCAGACCATCTGCTTTGGAGGTGCCCGGATGTaGCAGTTGAACTCACATAGCTTCTCCTTGAGTGATGCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: RGRLHQTICFGGARM*QLNSHSFSLSDAVP
Trigger: GGGGACAGCATCACTCAAGGAGAAGCTATGTGAGTTCAACTGCAACATCCGGGCACCTCCAAAGCAGATGGTCTGGTGCAGCCGTCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000417508.1
ENST00000453689.5
ENST00000481812.4
CDS TCA 72 bp GCCTCATTCCGGTGTTCGATGGCCACATCTGCAGCCTaGGCCACATCGCCAACAAGAAGCAAAGCCTTGACC +
Preference number: 6 (lower is better)
Translates to: ASFRCSMATSAA*ATSPTRSKALT
Trigger: GGTCAAGGCTTTGCTTCTTGTTGGCGATGTGGCTCAGGCTGCAGATGTGGCCATCGAACACCGGAATGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS TCA 72 bp TGCCAAGCCCAGGTGCTAGGGGAGGAACCCCTTGCTTaGGATGTACAGGATGGACTCCTCACTTCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: CQAQVLGEEPLA*DVQDGLLTSSG
Trigger: CCCAGAAGAAGTGAGGAGTCCATCCTGTACATCTCAAGCAAGGGGTTCCTCCCCTAGCACCTGGGCTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS TCA 72 bp AATCTGTCCAGGAAACACTTTCCGAAGGAGGCGGCCTaGGAAGAGCCAGAGGGCGATAGGAGAGAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: NLSRKHFPKEAA*EEPEGDRRELP
Trigger: GGGAAGCTCTCTCCTATCGCCCTCTGGCTCTTCTCAGGCCGCCTCCTTCGGAAAGTGTTTCCTGGACAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380443.5
CDS GCA 72 bp GCCACATCGCCAACAAGAAGCAAAGCCTTGACCTTCTaGTCGGGACCCACGCGGGAAGCATACTTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: ATSPTRSKALTF*SGPTREAYFLA
Trigger: AGCCAAGAAGTATGCTTCCCGCGTGGGTCCCGAGCAGAAGGTCAAGGCTTTGCTTCTTGTTGGCGATGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS GCA 72 bp CAGCTCAGCCTCATTCCGGTGTTCGATGGCCACATCTaGAGCCTGAGCCACATCGCCAACAAGAAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: QLSLIPVFDGHI*SLSHIANKKQS
Trigger: GCTTTGCTTCTTGTTGGCGATGTGGCTCAGGCTGCAGATGTGGCCATCGAACACCGGAATGAGGCTGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS GCA 72 bp ATGTACAGGATGGACTCCTCACTTCTTCTGGGCTTGTaGCCTGGCCCGTTGAATCTTGTCAGCTGTGGCCCC +
Preference number: 6 (lower is better)
Translates to: MYRMDSSLLLGL*PGPLNLVSCGP
Trigger: GGGGCCACAGCTGACAAGATTCAACGGGCCAGGGCACAAGCCCAGAAGAAGTGAGGAGTCCATCCTGTACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS CCA 72 bp CAGCTCATATTTCCGGTAAAAGGCAGAGTCCCCGAGTaGGTTCCAGTTCGCCGTGTAGCAGTCCATGGCTGG +
Preference number: 6 (lower is better)
Translates to: QLIFPVKGRVPE*VPVRRVAVHGW
Trigger: CCAGCCATGGACTGCTACACGGCGAACTGGAACCCACTCGGGGACTCTGCCTTTTACCGGAAATATGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000417508.1
ENST00000453689.5
CDS CCA 72 bp CAGAGGCATGCCGGAAGCAGAGTATATATCGAGCACTaGCCTCACACTAGCAGCTTTCTCCTTCCGCCAGGG +
Preference number: 6 (lower is better)
Translates to: QRHAGSRVYIEH*PHTSSFLLPPG
Trigger: CCCTGGCGGAAGGAGAAAGCTGCTAGTGTGAGGCCAGTGCTCGATATATACTCTGCTTCCGGCATGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380445.8
ENST00000380469.7
CDS CAA 90 bp CCCTTGCTTGAGATGTACAGGATGGACTCCTCACTTCTTCTGGGCTaGTGCCCTGGCCCGTTGAATCTTGTCAGCTGTGGCCCCATCTGT +
Preference number: 6 (lower is better)
Translates to: PLLEMYRMDSSLLLG*CPGPLNLVSCGPIC
Trigger: ACAGATGGGGCCACAGCTGACAAGATTCAACGGGCCAGGGCACAAGCCCAGAAGAAGTGAGGAGTCCATCCTGTACATCTCAAGCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS TCA 72 bp TCTTCTAGGCGCCGCTGCAGCCGTAGGAGCCGCATTTaGTCCTCTGTAGCCTTGGCTGCAAACTCATTCTTG +
Preference number: 6 (lower is better)
Translates to: SSRRRCSRRSRI*SSVALAANSFL
Trigger: CAAGAATGAGTTTGCAGCCAAGGCTACAGAGGATCAAATGCGGCTCCTACGGCTGCAGCGGCGCCTAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS TCA 72 bp CGGAAGTCACGTGCCAGCTGCTCTGCACGCTTGTTGTaGCCGCCAAGAATGAGGGTGGTAACTGTGTCATGT +
Preference number: 6 (lower is better)
Translates to: RKSRASCSARLL*PPRMRVVTVSC
Trigger: ACATGACACAGTTACCACCCTCATTCTTGGCGGTCACAACAAGCGTGCAGAGCAGCTGGCACGTGACTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS CCA 72 bp ACGCAGGTCCTGACACATGTGCACGAAGCTGTCGGGTaGAAATCTGTCCAGGAAACACTTTCCGAAGGAGGC +
Preference number: 6 (lower is better)
Translates to: TQVLTHVHEAVG*KSVQETLSEGG
Trigger: GCCTCCTTCGGAAAGTGTTTCCTGGACAGATTTCCACCCGACAGCTTCGTGCACATGTGTCAGGACCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000481812.4
CDS CCA 72 bp GTACTTCAGGAAGGCGCAAGTACTCGCATATCTGGATaGCCAGGGGGTAAAGTCTCCGCAACACGAGCCTGT +
Preference number: 6 (lower is better)
Translates to: VLQEGASTRISG*PGGKVSATRAC
Trigger: ACAGGCTCGTGTTGCGGAGACTTTACCCCCTGGCCATCCAGATATGCGAGTACTTGCGCCTTCCTGAAGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000453689.5
ENST00000481812.4
CDS CCA 72 bp CTACTCGCCCCTCAATACGCTCTTCTGCAGCATAGCTaGCTCGGATGTGGAAGCTGCCCAATTCCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: LLAPQYALLQHS*LGCGSCPIPGD
Trigger: ATCACCAGGAATTGGGCAGCTTCCACATCCGAGCCAGCTATGCTGCAGAAGAGCGTATTGAGGGGCGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000487461.1
CDS CAA 72 bp GTGTCCCCGCTCTCGATGGCCTTGCTTAGTGCCAGTTaGCTCCTCTTCATCTTTAGGAGAAGGGGTACCTGC +
Preference number: 6 (lower is better)
Translates to: VSPLSMALLSAS*LLFIFRRRGTC
Trigger: GCAGGTACCCCTTCTCCTAAAGATGAAGAGGAGCAAACTGGCACTAAGCAAGGCCATCGAGAGCGGGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000487461.1
CDS CAA 90 bp AGCAACACCGTGAACACCAGGTCAGTGTCCCCGCTCTCGATGGCCTaGCTTAGTGCCAGTTTGCTCCTCTTCATCTTTAGGAGAAGGGGT +
Preference number: 6 (lower is better)
Translates to: SNTVNTRSVSPLSMA*LSASLLLFIFRRRG
Trigger: ACCCCTTCTCCTAAAGATGAAGAGGAGCAAACTGGCACTAAGCAAGGCCATCGAGAGCGGGGACACTGACCTGGTGTTCACGGTGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000487461.1
CDS GCA 72 bp AGTTTGCTCCTCTTCATCTTTAGGAGAAGGGGTACCTaGTCCCCTGAGCGTGGCTCATACTCCAGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SLLLFIFRRRGT*SPERGSYSSSL
Trigger: CAAGCTGCTGGAGTATGAGCCACGCTCAGGGGAGCAGGTACCCCTTCTCCTAAAGATGAAGAGGAGCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS GCA 72 bp AGTTTGCTCCTCTTCATCTTTAGGAGAAGGGGTACCTaGTCCCCTGAGCGTGGCTCATACTCCAGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: SLLLFIFRRRGT*SPERGSYSSSC
Trigger: ACAGCTGCTGGAGTATGAGCCACGCTCAGGGGAGCAGGTACCCCTTCTCCTAAAGATGAAGAGGAGCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487461.1
CDS TCA 72 bp CAGCTTCTGGTTAATGGCTCGAGCCACATCCTCATCTaGGACATCCTTCTGTTGCACCTTGTAGCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: QLLVNGSSHILI*DILLLHLVAGP
Trigger: TGGGCCTGCTACAAGGTGCAACAGAAGGATGTCTCAGATGAGGATGTGGCTCGAGCCATTAACCAGAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000453689.5
ENST00000481812.4
ENST00000487461.1
CDS CAA 72 bp CAGACCATCTGCTTTGGAGGTGCCCGGATGTTGCAGTaGAACTCACATAGCTTCTCCTTGAGTGATGCTGTC +
Preference number: 6 (lower is better)
Translates to: QTICFGGARMLQ*NSHSFSLSDAV
Trigger: GACAGCATCACTCAAGGAGAAGCTATGTGAGTTCAACTGCAACATCCGGGCACCTCCAAAGCAGATGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380445.8
ENST00000380469.7
ENST00000417508.1
ENST00000453689.5
ENST00000481812.4
CDS CAA 90 bp GGGACCCACGCGGGAAGCATACTTCTTGGCTTCGTATTTGTTATGTaGTTTCATGCAGATCTCCACAAAAGGCTTGGAGGAGAGGAAGCG +
Preference number: 6 (lower is better)
Translates to: GTHAGSILLGFVFVM*FHADLHKRLGGEEA
Trigger: CGCTTCCTCTCCTCCAAGCCTTTTGTGGAGATCTGCATGAAACAACATAACAAATACGAAGCCAAGAAGTATGCTTCCCGCGTGGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466415.1
CDS GCA 72 bp GCTCTTCTGCAGCATAGCTGGCTCGGATGTGGAAGCTaGCCAATTCCTGGTGATTGTCATCCTGATTGTAAA +
Preference number: 6 (lower is better)
Translates to: ALLQHSWLGCGS*PIPGDCHPDCK
Trigger: TTTACAATCAGGATGACAATCACCAGGAATTGGGCAGCTTCCACATCCGAGCCAGCTATGCTGCAGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000487461.1
CDS CAA 90 bp TTCTGCTCGGGACCCACGCGGGAAGCATACTTCTTGGCTTCGTATTaGTTATGTTGTTTCATGCAGATCTCCACAAAAGGCTTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: FCSGPTREAYFLASY*LCCFMQISTKGLEE
Trigger: CTCCTCCAAGCCTTTTGTGGAGATCTGCATGAAACAACATAACAAATACGAAGCCAAGAAGTATGCTTCCCGCGTGGGTCCCGAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466415.1
CDS CCA 72 bp CCTTCTGCTCGGGACCCACGCGGGAAGCATACTTCTTaGCTTCGTATTTGTTATGTTGTTTCATGCAGATCT +
Preference number: 6 (lower is better)
Translates to: PSARDPRGKHTS*LRICYVVSCRS
Trigger: AGATCTGCATGAAACAACATAACAAATACGAAGCCAAGAAGTATGCTTCCCGCGTGGGTCCCGAGCAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS CAA 72 bp ACCTTCTGCTCGGGACCCACGCGGGAAGCATACTTCTaGGCTTCGTATTTGTTATGTTGTTTCATGCAGATC +
Preference number: 6 (lower is better)
Translates to: TFCSGPTREAYF*ASYLLCCFMQI
Trigger: GATCTGCATGAAACAACATAACAAATACGAAGCCAAGAAGTATGCTTCCCGCGTGGGTCCCGAGCAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS CAA 90 bp AAAGCCTTGACCTTCTGCTCGGGACCCACGCGGGAAGCATACTTCTaGGCTTCGTATTTGTTATGTTGTTTCATGCAGATCTCCACAAAA +
Preference number: 6 (lower is better)
Translates to: KALTFCSGPTREAYF*ASYLLCCFMQISTK
Trigger: TTTTGTGGAGATCTGCATGAAACAACATAACAAATACGAAGCCAAGAAGTATGCTTCCCGCGTGGGTCCCGAGCAGAAGGTCAAGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS GCA 72 bp ATACACCCGTCAGTACATATAATCCCCCAACCCCCATaGACAGACAGTTGTGATCTCAACATTCTTAGGGCA +
Preference number: 6 (lower is better)
Translates to: IHPSVHIIPQPP*TDSCDLNILRA
Trigger: TGCCCTAAGAATGTTGAGATCACAACTGTCTGTGCATGGGGGTTGGGGGATTATATGTACTGACGGGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466415.1
CDS CAA 72 bp GGACCCACGCGGGAAGCATACTTCTTGGCTTCGTATTaGTTATGTTGTTTCATGCAGATCTCCACAAAAGGC +
Preference number: 6 (lower is better)
Translates to: GPTREAYFLASY*LCCFMQISTKG
Trigger: GCCTTTTGTGGAGATCTGCATGAAACAACATAACAAATACGAAGCCAAGAAGTATGCTTCCCGCGTGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
ENST00000466415.1
CDS CAA 72 bp GGCAGAAATCACCTAAACCAAAGCTCTGTCAGAGACTaGAGACCAATTATTTCCACGCTTCTGCTCTACCAC +
Preference number: 6 (lower is better)
Translates to: GRNHLNQSSVRD*RPIISTLLLYH
Trigger: GTGGTAGAGCAGAAGCGTGGAAATAATTGGTCTCAAGTCTCTGACAGAGCTTTGGTTTAGGTGATTTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466415.1
CDS GCA 72 bp TCTCCACAAAAGGCAGGTAGCCAATGGGTGATTTCTTaGTCTTGGAAAACTTCTCTAGCTCTTCCCAATCTT +
Preference number: 6 (lower is better)
Translates to: SPQKAGSQWVIS*SWKTSLALPNL
Trigger: AAGATTGGGAAGAGCTAGAGAAGTTTTCCAAGAGCAAGAAATCACCCATTGGCTACCTGCCTTTTGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7
CDS CCA 72 bp CAAAAGGCAGGTAGCCAATGGGTGATTTCTTGCTCTTaGAAAACTTCTCTAGCTCTTCCCAATCTTCCAAAT +
Preference number: 6 (lower is better)
Translates to: QKAGSQWVISCS*KTSLALPNLPN
Trigger: ATTTGGAAGATTGGGAAGAGCTAGAGAAGTTTTCCAAGAGCAAGAAATCACCCATTGGCTACCTGCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380443.5
ENST00000380445.8
ENST00000380469.7