RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS13D (Homo sapiens)

Ensembl gene IDs: ENSG00000048707

Ensembl transcript IDs: ENST00000011700.10, ENST00000460333.5, ENST00000466732.2, ENST00000469054.1, ENST00000473099.1, ENST00000476045.5, ENST00000476169.1, ENST00000481484.1, ENST00000487188.1, ENST00000489961.1, ENST00000543710.5, ENST00000543766.2, ENST00000613099.4, ENST00000620676.6, ENST00000643711.1, ENST00000645148.1, ENST00000645371.1, ENST00000646411.1, ENST00000646917.1, ENST00000647414.1

Found 2493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGGCCCAGGGGCTGGGGAAGCACTGGCCTGGCTCACCCTTCAGTaGGCACAGAGAAGCAGCGACAGCCAGGGAGTGACACGGGTCGGC +
Preference number: 1 (lower is better)
Translates to: PGPGAGEALAWLTLQ*AQRSSDSQGVTRVG
Trigger: GCCGACCCGTGTCACTCCCTGGCTGTCGCTGCTTCTCTGTGCTCACTGAAGGGTGAGCCAGGCCAGTGCTTCCCCAGCCCCTGGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CCA 90 bp TCCCCAAACCCGACTCCGGTTCTGCCTCCATCGTCAGCTGAGAGCTaGGCCTCTTTCCTCCTGGTGGGTCTGCGCTGTGTCGGGAGCGCC +
Preference number: 1 (lower is better)
Translates to: SPNPTPVLPPSSAES*ASFLLVGLRCVGSA
Trigger: GGCGCTCCCGACACAGCGCAGACCCACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGATGGAGGCAGAACCGGAGTCGGGTTTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 90 bp TGGGCTTCTGGTGGGAGGGGCCGGGGATGGACACTCCACTGCTCGTaGTCACGGCTTTCTTGGTCACCTGCACATACACCTTCCCATGGT +
Preference number: 1 (lower is better)
Translates to: WASGGRGRGWTLHCS*SRLSWSPAHTPSHG
Trigger: ACCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCCCCGGCCCCTCCCACCAGAAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR CCA 90 bp AGGGGCCGGGGATGGACACTCCACTGCTCGTGCTCACGGCTTTCTTaGTCACCTGCACATACACCTTCCCATGGTCTTTGGAGACAAGGC +
Preference number: 1 (lower is better)
Translates to: RGRGWTLHCSCSRLS*SPAHTPSHGLWRQG
Trigger: GCCTTGTCTCCAAAGACCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCCCCGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR GCA 90 bp CAGAGAAGCAGCGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTaGTGGGTCAAGGGACTGGGTAGCTTTGGATATCTCCTTACCCAA +
Preference number: 1 (lower is better)
Translates to: QRSSDSQGVTRVGQL*WVKGLGSFGYLLTQ
Trigger: TTGGGTAAGGAGATATCCAAAGCTACCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCGCTGCTTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 90 bp GGATGCCGGCTACAAGGTGTTCACCACTTGTGGCTGCATGGTACCTaGTGTACTCCCGCTCTGACTGATGCCGATTGTCCATCGTCTTCC +
Preference number: 1 (lower is better)
Translates to: GCRLQGVHHLWLHGT*CTPALTDADCPSSS
Trigger: GGAAGACGATGGACAATCGGCATCAGTCAGAGCGGGAGTACATCAGGTACCATGCAGCCACAAGTGGTGAACACCTTGTAGCCGGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR GCA 90 bp GAACACTATGTAGCTACTTGTGCTAAAGCTCCCTTCCTTCCTCTCTaGATGCACGCGCGCGCGCGCACACACACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: EHYVATCAKAPFLPL*MHARARTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAGAGGAAGGAAGGGAGCTTTAGCACAAGTAGCTACATAGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 90 bp GGAAGCTGCAGAGGAGCTGCCATCTTGTGCAGTGCTGTATCCTGCTaGCATCTTGTGCAGTGCGTGAGTGCTGAGACAATCATCACCACC +
Preference number: 1 (lower is better)
Translates to: GSCRGAAILCSAVSC*HLVQCVSAETIITT
Trigger: GGTGGTGATGATTGTCTCAGCACTCACGCACTGCACAAGATGGCAGCAGGATACAGCACTGCACAAGATGGCAGCTCCTCTGCAGCTTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 90 bp GGAGGAAGCTGCAGAGGAGCTGCCATCTTGTGCAGTGCTGTATCCTaGTGCCATCTTGTGCAGTGCGTGAGTGCTGAGACAATCATCACC +
Preference number: 1 (lower is better)
Translates to: GGSCRGAAILCSAVS*CHLVQCVSAETIIT
Trigger: GGTGATGATTGTCTCAGCACTCACGCACTGCACAAGATGGCAGCAGGATACAGCACTGCACAAGATGGCAGCTCCTCTGCAGCTTCCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CCA 90 bp AGAAGCAGCGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTaGGTCAAGGGACTGGGTAGCTTTGGATATCTCCTTACCCAATTT +
Preference number: 1 (lower is better)
Translates to: RSSDSQGVTRVGQLC*VKGLGSFGYLLTQF
Trigger: AAATTGGGTAAGGAGATATCCAAAGCTACCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCGCTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CCA 90 bp AGTCATTCCGAGGCCAGTGGAACACCACACTGGAACCAGGAAGGGTaGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAA +
Preference number: 1 (lower is better)
Translates to: SHSEASGTPHWNQEG*KCNLRDWLFPVPWQ
Trigger: TTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCACTGGCCTCGGAATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR CCA 90 bp AAGGTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATaGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCT +
Preference number: 1 (lower is better)
Translates to: KVARWVRPRHNPMKS*ASLQSGAWVQLRHA
Trigger: AGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR TCA 90 bp AGTGATAAAAGGTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATaGAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGCTAC +
Preference number: 1 (lower is better)
Translates to: SDKRWQGGFVPGIIQ*SHGLHFSPEPGFSY
Trigger: GTAGCTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCACCTTTTATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR TCA 90 bp CATACTTACAAACAAAGTGGCCCTGGAGCCTTCAGAACATTGCGATaGGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGGGGAAGG +
Preference number: 1 (lower is better)
Translates to: HTYKQSGPGAFRTLR*APTKQQDTLGIWGR
Trigger: CCTTCCCCAAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGGCTCCAGGGCCACTTTGTTTGTAAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 90 bp TCACCACTTGTGGCTGCATGGTACCTGATGTACTCCCGCTCTGACTaGTGCCGATTGTCCATCGTCTTCCCTAAGCCATCTGATAATGTT +
Preference number: 1 (lower is better)
Translates to: SPLVAAWYLMYSRSD*CRLSIVFPKPSDNV
Trigger: AACATTATCAGATGGCTTAGGGAAGACGATGGACAATCGGCATCAGTCAGAGCGGGAGTACATCAGGTACCATGCAGCCACAAGTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR GCA 90 bp AGCCCGCAGCTAACTTCCTCAGTCAGGTCTGAGAACACCCAGCACTaGTGCGGCCCAAAGCAGATTTTCTTAGTAACACTAAACTCCTTA +
Preference number: 1 (lower is better)
Translates to: SPQLTSSVRSENTQH*CGPKQIFLVTLNSL
Trigger: TAAGGAGTTTAGTGTTACTAAGAAAATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTTCTCAGACCTGACTGAGGAAGTTAGCTGCGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 90 bp CAGATCATACTTACAAACAAAGTGGCCCTGGAGCCTTCAGAACATTaGGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGGG +
Preference number: 1 (lower is better)
Translates to: QIILTNKVALEPSEH*DEHPPSSKTLLGFG
Trigger: CCCAAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGGCTCCAGGGCCACTTTGTTTGTAAGTATGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CCA 90 bp ACAATAGCTGATCATAGTCATTCCGAGGCCAGTGGAACACCACACTaGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTC +
Preference number: 1 (lower is better)
Translates to: TIADHSHSEASGTPH*NQEGWKCNLRDWLF
Trigger: GAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCACTGGCCTCGGAATGACTATGATCAGCTATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR GCA 90 bp CCGCAGCTAACTTCCTCAGTCAGGTCTGAGAACACCCAGCACTGCTaGGGCCCAAAGCAGATTTTCTTAGTAACACTAAACTCCTTAATC +
Preference number: 1 (lower is better)
Translates to: PQLTSSVRSENTQHC*GPKQIFLVTLNSLI
Trigger: GATTAAGGAGTTTAGTGTTACTAAGAAAATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTTCTCAGACCTGACTGAGGAAGTTAGCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 90 bp TCCATTTGTACTTTTCCTCATGAGGATTTACTTTCCCTCATTCCTTaGCAACTTCCCCAAACCCGACTCCGGTTCTGCCTCCATCGTCAG +
Preference number: 1 (lower is better)
Translates to: SICTFPHEDLLSLIP*QLPQTRLRFCLHRQ
Trigger: CTGACGATGGAGGCAGAACCGGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAGGAAAAGTACAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 90 bp AAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTaGTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGT +
Preference number: 1 (lower is better)
Translates to: KRNTKNKTQGAHTRP*SQQEFKTKDKRCLC
Trigger: ACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 90 bp TCCCATGGTCTTTGGAGACAAGGCAGTGGTAGAGGTCATCGTATTTaGCTTCTAGGAAAATGGCTTCTCGATCCACGTAGTCTCCACTTT +
Preference number: 1 (lower is better)
Translates to: SHGLWRQGSGRGHRI*LLGKWLLDPRSLHF
Trigger: AAAGTGGAGACTACGTGGATCGAGAAGCCATTTTCCTAGAAGTCAAATACGATGACCTCTACCACTGCCTTGTCTCCAAAGACCATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR TCA 90 bp CTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTaGCACACAATAGCTGATCATAGTCATTCCGAGGCCAGTGGAACA +
Preference number: 1 (lower is better)
Translates to: LQSLQTKYNWERPSV*HTIADHSHSEASGT
Trigger: TGTTCCACTGGCCTCGGAATGACTATGATCAGCTATTGTGTGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR TCA 90 bp ACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACTaGTCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGA +
Preference number: 1 (lower is better)
Translates to: TGTLEKLSIRKGGGN*SVSLNEILYVAPRR
Trigger: TCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGATCAGTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR GCA 90 bp ATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTaGCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTGGGTTC +
Preference number: 1 (lower is better)
Translates to: IILEIIHVAVDLRGP*PFNSQSDKRWQGGF
Trigger: GAACCCACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR TCA 90 bp GTTCATAGTAGAGGCTCTTTGCGTAGTTTATTTCTTGTGACAACTTaGCAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGT +
Preference number: 1 (lower is better)
Translates to: VHSRGSLRSLFLVTT*QQGPQISHGPWASG
Trigger: ACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAATAAACTACGCAAAGAGCCTCTACTATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR TCA 90 bp AAGCTGCTGTTCATAGTAGAGGCTCTTTGCGTAGTTTATTTCTTGTaGCAACTTGACAGCAAGGACCTCAGATTTCACATGGACCATGGG +
Preference number: 1 (lower is better)
Translates to: KLLFIVEALCVVYFL*QLDSKDLRFHMDHG
Trigger: CCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAATAAACTACGCAAAGAGCCTCTACTATGAACAGCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR TCA 90 bp GGGAAGAAGATTAGCTTCATTTGTGTCTTGGAAGGATTTGGGTCATaGGTTATAAACACCAAAACCTTCCACGCATCCACTGATCCACTG +
Preference number: 1 (lower is better)
Translates to: GKKISFICVLEGFGS*VINTKTFHASTDPL
Trigger: CAGTGGATCAGTGGATGCGTGGAAGGTTTTGGTGTTTATAACTCATGACCCAAATCCTTCCAAGACACAAATGAAGCTAATCTTCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 90 bp GATTCCATTTTAACATCTGCCTCTCCTAAGGTGCAAATGTCAAAGTaGTTGGTTGTGCAATCACAGGAGATGGGCAGCTATTTAAAGAGC +
Preference number: 1 (lower is better)
Translates to: DSILTSASPKVQMSK*LVVQSQEMGSYLKS
Trigger: GCTCTTTAAATAGCTGCCCATCTCCTGTGATTGCACAACCAAGCACTTTGACATTTGCACCTTAGGAGAGGCAGATGTTAAAATGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 90 bp AAAAGCAGTAGAAATGATCTTAACAAAGTCTTAGGCATTGCTGGCTaGATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGG +
Preference number: 1 (lower is better)
Translates to: KSSRNDLNKVLGIAG*ISVYKETGHLRSQG
Trigger: CCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCAATGCCTAAGACTTTGTTAAGATCATTTCTACTGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 90 bp AACCTCTCTAATAATAATAACCTGAGAAAACTTACAATGCTGACTTaGACCCATGTGGTAATGGAGCACAGGTTTCCCCCTAAGTTTGGT +
Preference number: 1 (lower is better)
Translates to: NLSNNNNLRKLTMLT*THVVMEHRFPPKFG
Trigger: ACCAAACTTAGGGGGAAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAGGTTATTATTATTAGAGAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp CTGGGGCCCCGTGCAGCAACGCGGTTTCCGAACCCTCTGTGCTTGAGTCCTGGGCGCCTGGGCTGTTTCTaGTGCAAAATCCAGGGCGCC +
Preference number: 2 (lower is better)
Translates to: LGPRAATRFPNPLCLSPGRLGCF*CKIQGA
Trigger: GGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCG...CCCAGGACTCAAGCACAGAGGGTTCGGAAACCGCGTTGCTGCACGGGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGGCCAGCGCCAGTCCTaGGTGCCACAGCTCACAGCC +
Preference number: 2 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLGQRQS*VPQLTA
Trigger: GGCTGTGAGCTGTGGCACCCAGGACTGGCGCTGGCC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGGGAGAGCTGAGAAGTaGAGCAGCTCGCAGTTGGCC +
Preference number: 2 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGGRAEK*SSSQLA
Trigger: GGCCAACTGCGAGCTGCTCCACTTCTCAGCTCTCCC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCCTCTTTCCTCCTGGTaGGTCTGCGCTGTGTCGGGA +
Preference number: 2 (lower is better)
Translates to: LCMHARARTHTHTHTHTQPLSSW*VCAVSG
Trigger: TCCCGACACAGCGCAGACCCACCAGGAGGAAAGAGG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTCCTCCTGGTGGGTCTaGGCTGTGTCGGGAGCGCCC +
Preference number: 2 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWSSWWV*AVSGAP
Trigger: GGGCGCTCCCGACACAGCGCAGACCCACCAGGAGGA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACCCTTCCTTCCTCTCTaGATGCACGCGCGCGCGCGC +
Preference number: 2 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRPFLPL*MHARAR
Trigger: GCGCGCGCGCGCGTGCATGCAGAGAGGAAGGAAGGG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGGCCAGCGCCAGTCCTaGGTGCCACAGCTCACAGCC +
Preference number: 2 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWGQRQS*VPQLTA
Trigger: GGCTGTGAGCTGTGGCACCCAGGACTGGCGCTGGCC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTCCTTCCTCTCTGCATaGACGCGCGCGCGCGCACAC +
Preference number: 2 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWSFLSA*TRARAH
Trigger: GTGTGCGCGCGCGCGCGTGCATGCAGAGAGGAAGGA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGGAGCAGCTCGCAGTTaGCCCTCCCATCTCCCACCC +
Preference number: 2 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRGAARS*PSHLPP
Trigger: GGGTGGGAGATGGGAGGGCCAACTGCGAGCTGCTCC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CAA 90 bp GAGGGGCCGGGGATGGACACTCCACTGCTCGTGCTCACGGCTTTCTaGGTCACCTGCACATACACCTTCCCATGGTCTTTGGAGACAAGG +
Preference number: 2 (lower is better)
Translates to: EGPGMDTPLLVLTAF*VTCTYTFPWSLETR
Trigger: CCTTGTCTCCAAAGACCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCCCCGGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCCTCCTGGTGGGTCTaGGCTGTGTCGGGAGCGCCC +
Preference number: 2 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSSWWV*AVSGAP
Trigger: GGGCGCTCCCGACACAGCGCAGACCCACCAGGAGGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGGCCAGCGCCAGTCCTaGGTGCCACAGCTCACAGCC +
Preference number: 2 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAGQRQS*VPQLTA
Trigger: GGCTGTGAGCTGTGGCACCCAGGACTGGCGCTGGCC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTGTCCCCTCGGGCTGTaGAGCTACGATGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVCPLGL*SYDACL
Trigger: CAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTGCAATCCACTAACTTaGAGTTCAGCAAAGGCAACC +
Preference number: 2 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGCNPLT*SSAKAT
Trigger: GGTTGCCTTTGCTGAACTCCAAGTTAGTGGATTGCA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CTTGACAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGTGGGAGGGCAGGGCGCCTGCCACTaGCTTGGTTACAGTGCCAAC +
Preference number: 2 (lower is better)
Translates to: LDSKDLRFHMDHGLLVGGQGACH*LGYSAN
Trigger: GTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTG...CCCTCCCACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATCTCCTAGATCCTTCTaGAGGGCCAGCGCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRSPRSF*RASASP
Trigger: AGGACTGGCGCTGGCCCTTCAGAAGGATCTAGGAGA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGCAGTGCGTGAGTGCTaGGACAATCATCACCACCCC +
Preference number: 2 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWAVREC*DNHHHP
Trigger: GGGGTGGTGATGATTGTCTCAGCACTCACGCACTGC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp AAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAAGCCCTTTTCCCCACCAATGATACCATaGGCCAGGCCATGGATGCCG +
Preference number: 2 (lower is better)
Translates to: KIQGACHWLGYSANKPFSPPMIP*ARPWMP
Trigger: CGGCATCCATGGCCTGGCTCATGGTATCATTGGTGG...GGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTCGTCAGCTGAGAGCTaGGCCTCTTTCCTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWSSAES*ASFLLV
Trigger: CACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGGAGCAGCTCGCAGTTaGCCCTCCCATCTCCCACCC +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFGAARS*PSHLPP
Trigger: GGGTGGGAGATGGGAGGGCCAACTGCGAGCTGCTCC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTCTCCTAGATCCTTCTaGAGGGCCAGCGCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSPRSF*RASASP
Trigger: AGGACTGGCGCTGGCCCTTCAGAAGGATCTAGGAGA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp AAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAAGCCCTTTTCCTACTCCCGCTCTGACTaGTGCCGATTGTCCATCGTC +
Preference number: 2 (lower is better)
Translates to: KIQGACHWLGYSANKPFSYSRSD*CRLSIV
Trigger: GACGATGGACAATCGGCATCAGTCAGAGCGGGAGTA...GGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR TCA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGTCAGCTACGCCATGCTaGGTAAAGACAACCGGGACC +
Preference number: 2 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWSATPC*VKTTGT
Trigger: GGTCCCGGTTGTCTTTACTCAGCATGGCGTAGCTGA...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGCGCCAGTCCTGGGTaGCACAGCTCACAGCCCAAC +
Preference number: 2 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSASPG*HSSQPN
Trigger: GTTGGGCTGTGAGCTGTGGCACCCAGGACTGGCGCT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAGCGCCAGTCCTGGGTaGCACAGCTCACAGCCCAAC +
Preference number: 2 (lower is better)
Translates to: CWLNISLQRDGAFKEPGASASPG*HSSQPN
Trigger: GTTGGGCTGTGAGCTGTGGCACCCAGGACTGGCGCT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTCCCTTCTCCCTATCTaGTTAATCCTTACAGAAAAG +
Preference number: 2 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSLLPI*LILTEK
Trigger: CTTTTCTGTAAGGATTAAGCAGATAGGGAGAAGGGA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTCCCTTCCTTCCTCTCTaGATGCACGCGCGCGCGCGC +
Preference number: 2 (lower is better)
Translates to: VIEGSLTHTINPSESLIFPFLPL*MHARAR
Trigger: GCGCGCGCGCGCGTGCATGCAGAGAGGAAGGAAGGG...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGAGAACACCCAGCACTaGTGCGGCCCAAAGCAGATT +
Preference number: 2 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRENTQH*CGPKQI
Trigger: AATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTTCTC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp GTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAGAGCCAGGCCATGGATaGCGGCTACAAGGTGTTCAC +
Preference number: 2 (lower is better)
Translates to: VSDAKSRAPATGLVTVPTEPGHG*RLQGVH
Trigger: GTGAACACCTTGTAGCCGGCATCCATGGCCTGGCTC...TGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTCGTCAGCTGAGAGCTaGGCCTCTTTCCTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVSSAES*ASFLLV
Trigger: CACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTGTCCCCTCGGGCTGTaGAGCTACGATGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALCPLGL*SYDACL
Trigger: CAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGGGCTGGGGAAGCACTaGCCTGGCTCACCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFGLGKH*PGSPFS
Trigger: ACTGAAGGGTGAGCCAGGCCAGTGCTTCCCCAGCCC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CAA 90 bp CAGTTGGCCCTCCCATCTCCCACCCAGCCCCGCCCTAGGTGGTCTTaGGATTCCATTTTAACATCTGCCTCTCCTAAGGTGCAAATGTCA +
Preference number: 2 (lower is better)
Translates to: QLALPSPTQPRPRWS*DSILTSASPKVQMS
Trigger: TGACATTTGCACCTTAGGAGAGGCAGATGTTAAAATGGAATCCAAAGACCACCTAGGGCGGGGCTGGGTGGGAGATGGGAGGGCCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCAAAGTCTTAGGCATTaGTGGCTGAATATCAGTTTA +
Preference number: 2 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGQSLRH*WLNISL
Trigger: TAAACTGATATTCAGCCAGCAATGCCTAAGACTTTG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCCTCTTTCCTCCTGGTaGGTCTGCGCTGTGTCGGGA +
Preference number: 2 (lower is better)
Translates to: SLQKSETPKTRPRALIPGPLSSW*VCAVSG
Trigger: TCCCGACACAGCGCAGACCCACCAGGAGGAAAGAGG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGGGAGAGCTGAGAAGTaGAGCAGCTCGCAGTTGGCC +
Preference number: 2 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAGRAEK*SSSQLA
Trigger: GGCCAACTGCGAGCTGCTCCACTTCTCAGCTCTCCC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAGTCTTAGGCATTGCTaGCTGAATATCAGTTTACAA +
Preference number: 2 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSLRHC*LNISLQ
Trigger: TTGTAAACTGATATTCAGCCAGCAATGCCTAAGACT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGTCGGCCAACTGTGCTaGGTCAAGGGACTGGGTAGC +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFVGQLC*VKGLGS
Trigger: GCTACCCAGTCCCTTGACCCAGCACAGTTGGCCGAC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGAGTGGAACACCACACTaGAACCAGGAAGGGTGGAAA +
Preference number: 2 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRSGTPH*NQEGWK
Trigger: TTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCACT...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR CAA 90 bp GCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTaGGTTACAGTGCCAACAAGCCCTTTTCCAAGGCCAGATATGAAA +
Preference number: 2 (lower is better)
Translates to: AWAVSDAKSRAPATG*VTVPTSPFPRPDMK
Trigger: TTTCATATCTGGCCTTGGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGAAGGATTTGGGTCATaGGTTATAAACACCAAAACC +
Preference number: 2 (lower is better)
Translates to: LCMHARARTHTHTHTHTQEGFGS*VINTKT
Trigger: GGTTTTGGTGTTTATAACTCATGACCCAAATCCTTC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp AACAGCTTTGGAGGAGATGAGCACGCAGTAGCTGTCAATGTTCTCCACAGCGATTTTCCGAACCCTCTGTaGTTGAGTCCTGGGGCCGCT +
Preference number: 2 (lower is better)
Translates to: NSFGGDEHAVAVNVLHSDFPNPL*LSPGAA
Trigger: AGCGGCCCCAGGACTCAAGCACAGAGGGTTCGGAAA...ATCGCTGTGGAGAACATTGACAGCTACTGCGTGCTCATCTCCTCCAAAGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACCGGGGCTTTGTTCTTaGTTGTTGCTGCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAPGLCS*LLLPRQ
Trigger: CTGCCTGGGCAGCAACAACCAAGAACAAAGCCCCGG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACAGCCCCGCCCTAGGTaGTCTTTGGATTCCATTTTA +
Preference number: 2 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRQPRPR*SLDSIL
Trigger: TAAAATGGAATCCAAAGACCACCTAGGGCGGGGCTG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGCTTTCCCTCATTCCTTaGCAACTTCCCCAAACCCGA +
Preference number: 2 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVLSLIP*QLPQTR
Trigger: TCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAG...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGATCTTGTGCAGTGCGTaGGTGCTGAGACAATCATCA +
Preference number: 2 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWILCSA*VLRQSS
Trigger: TGATGATTGTCTCAGCACTCACGCACTGCACAAGAT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTCAACCCACTTTACTaGGAATACTTTAGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLNPLY*EYFSLQ
Trigger: TTGGAGACTAAAGTATTCCCAGTAAAGTGGGTTGAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGTGGAACCAGGAAGGGTaGAAATGTAACCTTCGGGAT +
Preference number: 2 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWWNQEG*KCNLRD
Trigger: ATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCA...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACATCCACTGATCCACTaGGTCATCCCAGACTCAGCT +
Preference number: 2 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAHPLIH*VIPDSA
Trigger: AGCTGAGTCTGGGATGACTCAGTGGATCAGTGGATG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCCTCCTGGTGGGTCTaGGCTGTGTCGGGAGCGCCC +
Preference number: 2 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSSWWV*AVSGAP
Trigger: GGGCGCTCCCGACACAGCGCAGACCCACCAGGAGGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATGCAGTGCTGTATCCTaGTGCCATCTTGTGCAGTGC +
Preference number: 2 (lower is better)
Translates to: CWLNISLQRDGAFKEPGACSAVS*CHLVQC
Trigger: GCACTGCACAAGATGGCAGCAGGATACAGCACTGCA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp CGGCTTTCTTGGTCACCTGCACATACACCTTCCCATGGTCTTTGGAGACAAGGCTTCACCACTTGTGGCTaGATGGTACCTGATGTACTC +
Preference number: 2 (lower is better)
Translates to: RLSWSPAHTPSHGLWRQGFTTCG*MVPDVL
Trigger: GAGTACATCAGGTACCATGCAGCCACAAGTGGTGAA...GCCTTGTCTCCAAAGACCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCCTCTTTCCTCCTGGTaGGTCTGCGCTGTGTCGGGA +
Preference number: 2 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFPLSSW*VCAVSG
Trigger: TCCCGACACAGCGCAGACCCACCAGGAGGAAAGAGG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGCTGGGTCAAGGGACTaGGTAGCTTTGGATATCTCC +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFAGSRD*VALDIS
Trigger: GGAGATATCCAAAGCTACCCAGTCCCTTGACCCAGC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CAA 90 bp TTCTCCACAGCGATGAAGAATTCGTCCTGTATGTTGTCTGTGAGTTaGAAGAGCTGCTCCTGTCCTTCCGCCTGGCTCTCAGAATATCGG +
Preference number: 2 (lower is better)
Translates to: FSTAMKNSSCMLSVS*KSCSCPSAWLSEYR
Trigger: CCGATATTCTGAGAGCCAGGCGGAAGGACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTCTTCATCGCTGTGGAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCTTTCCCTCATTCCTTaGCAACTTCCCCAAACCCGA +
Preference number: 2 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLSLIP*QLPQTR
Trigger: TCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTTCCCTCATTCCTTaGCAACTTCCCCAAACCCGA +
Preference number: 2 (lower is better)
Translates to: SLQKSETPKTRPRALIPGLSLIP*QLPQTR
Trigger: TCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGATGTCAAATGCCCCTaGAACCTTCTGGCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFDVKCP*NLLALS
Trigger: AGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCTTACAATGCTGACTTaGACCCATGTGGTAATGGAG +
Preference number: 2 (lower is better)
Translates to: CVPSGCGATMPACGFIKKLTMLT*THVVME
Trigger: CTCCATTACCACATGGGTGCAAGTCAGCATTGTAAG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGCTGTGGAGCTACGATaGCTGCCTGTGGCTTTATTA +
Preference number: 2 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALAVELR*LPVALL
Trigger: TAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGGGCCTCTTTCCTCCTaGTGGGTCTGCGCTGTGTCG +
Preference number: 2 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSGPLSS*WVCAVS
Trigger: CGACACAGCGCAGACCCACCAGGAGGAAAGAGGCCC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTCGTCAGCTGAGAGCTaGGCCTCTTTCCTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFSSAES*ASFLLV
Trigger: CACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTTTCATCCCCCTTTCTaGAACTCTCCCTGCTCCCTT +
Preference number: 2 (lower is better)
Translates to: SLQKSETPKTRPRALIPGFHPPF*NSPCSL
Trigger: AAGGGAGCAGGGAGAGTTCCAGAAAGGGGGATGAAA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATTGTAACCTTCGGGATTaGCTGTTCCCTGTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: EILYVAPRRVISTRRKKHCNLRD*LFPVPW
Trigger: CCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACA...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR-3UTR TCA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTATCTGTGTCACTAAATaGGATCCTATACGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVICVTK*DPIRSS
Trigger: GGAGCTACGTATAGGATCTCATTTAGTGACACAGAT...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR-3UTR TCA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTAAAGGAGGAGGTAACTaGTCTGTGTCACTAAATGAG +
Preference number: 2 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVKGGGN*SVSLNE
Trigger: CTCATTTAGTGACACAGATCAGTTACCTCCTCCTTT...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCCTCCTGGTGGGTCTaGGCTGTGTCGGGAGCGCCC +
Preference number: 2 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSSWWV*AVSGAP
Trigger: GGGCGCTCCCGACACAGCGCAGACCCACCAGGAGGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCTCTTTCCTCCTGGTaGGTCTGCGCTGTGTCGGGA +
Preference number: 2 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPLSSW*VCAVSG
Trigger: TCCCGACACAGCGCAGACCCACCAGGAGGAAAGAGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTCTCCTAGATCCTTCTaGAGGGCCAGCGCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSPRSF*RASASP
Trigger: AGGACTGGCGCTGGCCCTTCAGAAGGATCTAGGAGA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTCATTCATTCTAAAGTaGGGCCCCTTTTCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFSFILK*GPFSLL
Trigger: GAGAAGGGAAAAGGGGCCTCACTTTAGAATGAATGA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTACCCGACTCCGGTTCTaGCTCCATCGTCAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSTRLRF*LHRQLR
Trigger: TCTCAGCTGACGATGGAGGCAGAACCGGAGTCGGGT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCTTACAATGCTGACTTaGACCCATGTGGTAATGGAG +
Preference number: 2 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLTMLT*THVVME
Trigger: CTCCATTACCACATGGGTGCAAGTCAGCATTGTAAG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCGGGGCTTTGTTCTTaGTTGTTGCTGCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPGLCS*LLLPRQ
Trigger: CTGCCTGGGCAGCAACAACCAAGAACAAAGCCCCGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATGTCTTGGAAGGATTTaGGTCATGAGTTATAAACAC +
Preference number: 2 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRCLGRI*VMSYKH
Trigger: GTGTTTATAACTCATGACCCAAATCCTTCCAAGACA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTGTCTTGGAAGGATTTaGGTCATGAGTTATAAACAC +
Preference number: 2 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWCLGRI*VMSYKH
Trigger: GTGTTTATAACTCATGACCCAAATCCTTCCAAGACA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTGCAATCCACTAACTTaGAGTTCAGCAAAGGCAACC +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFCNPLT*SSAKAT
Trigger: GGTTGCCTTTGCTGAACTCCAAGTTAGTGGATTGCA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTAATCCAATGAAGTCATaGGCTTCACTTCAGTCCGGA +
Preference number: 2 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGNPMKS*ASLQSG
Trigger: TCCGGACTGAAGTGAAGCCCATGACTTCATTGGATT...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCTTTCCCTCATTCCTTaGCAACTTCCCCAAACCCGA +
Preference number: 2 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFLSLIP*QLPQTR
Trigger: TCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGTGCAAATGTCAAAGTaGTTGGTTGTGCAATCACAG +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFVQMSK*LVVQSQ
Trigger: CTGTGATTGCACAACCAAGCACTTTGACATTTGCAC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp GCGATGAAGAATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTGCTCCTGTCTGGCTTGGTTACAGTaGCAACAAGCCCTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: AMKNSSCMLSVSLKSCSCLAWLQ*QQALFQ
Trigger: TTGGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAG...ACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTCTTCATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGAAGGATTTGGGTCATaGGTTATAAACACCAAAACC +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFEGFGS*VINTKT
Trigger: GGTTTTGGTGTTTATAACTCATGACCCAAATCCTTC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTTAGGCATTGCTGGCTaGATATCAGTTTACAAAGAG +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFLGIAG*ISVYKE
Trigger: CTCTTTGTAAACTGATATTCAGCCAGCAATGCCTAA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCTCAACCCACTTTACTaGGAATACTTTAGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFLNPLY*EYFSLQ
Trigger: TTGGAGACTAAAGTATTCCCAGTAAAGTGGGTTGAG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTCAACCCACTTTACTaGGAATACTTTAGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: SLQKSETPKTRPRALIPGLNPLY*EYFSLQ
Trigger: TTGGAGACTAAAGTATTCCCAGTAAAGTGGGTTGAG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp TCATGGAGGTTTTCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGAATACAAATAAACACTaGCGTTCCAACCCAAAGTGG +
Preference number: 2 (lower is better)
Translates to: SWRFSSYFSTSGRQAPKWNTNKH*RSNPKW
Trigger: CCACTTTGGGTTGGAACGCCAGTGTTTATTTGTATT...CCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGAAAACCTCCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466732.2
3UTR-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAAATGTCAAAGTGCTTaGTTGTGCAATCACAGGAGA +
Preference number: 2 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAKCQSA*LCNHRR
Trigger: TCTCCTGTGATTGCACAACCAAGCACTTTGACATTT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTAAATGTCAAAGTGCTTaGTTGTGCAATCACAGGAGA +
Preference number: 2 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFKCQSA*LCNHRR
Trigger: TCTCCTGTGATTGCACAACCAAGCACTTTGACATTT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTCAAATCTTGGTTCCATaGAAAACTTACCAACGCAGC +
Preference number: 2 (lower is better)
Translates to: VIEGSLTHTINPSESLIFQILVP*KTYQRS
Trigger: GCTGCGTTGGTAAGTTTTTCATGGAACCAAGATTTG...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGCTGTGGAGCTACGATaGCTGCCTGTGGCTTTATTA +
Preference number: 2 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSAVELR*LPVALL
Trigger: TAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR GCA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACGGCAAATTCCCTCTGTaGAAATGCAAGCTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNGKFPL*KCKLVR
Trigger: TCTCACAAGCTTGCATTTGCACAGAGGGAATTTGCC...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGCCTTTGTCAAATCTTaGTTCCATGAAAAACTTACC +
Preference number: 2 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALAFVKS*FHEKLT
Trigger: GGTAAGTTTTTCATGGAACCAAGATTTGACAAAGGC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTCTCAACCCACTTTACTaGGAATACTTTAGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: VIEGSLTHTINPSESLIFLNPLY*EYFSLQ
Trigger: TTGGAGACTAAAGTATTCCCAGTAAAGTGGGTTGAG...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp ATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGAGAACGTCCATCAGTCTaGCACACAATAGCTGATCAT +
Preference number: 2 (lower is better)
Translates to: IKLPIILEIIHVAVDLRGERPSV*HTIADH
Trigger: ATGATCAGCTATTGTGTGTCAGACTGATGGACGTTC...TCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCTTACAATGCTGACTTaGACCCATGTGGTAATGGAG +
Preference number: 2 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLTMLT*THVVME
Trigger: CTCCATTACCACATGGGTGCAAGTCAGCATTGTAAG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CAA 90 bp TTTCCCAAGGTATCCCTCATGTTGATATGGAAGGAATTATTCTTGTaGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATC +
Preference number: 2 (lower is better)
Translates to: FPKVSLMLIWKELFL*TSKPPDQIQLGTSI
Trigger: GATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAACAAGAATAATTCCTTCCATATCAACATGAGGGATACCTTGGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR CAA 90 bp CATTTTCCCAAGGTATCCCTCATGTTGATATGGAAGGAATTATTCTaGTTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCC +
Preference number: 2 (lower is better)
Translates to: HFPKVSLMLIWKELF*LTSKPPDQIQLGTS
Trigger: GGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAACAAGAATAATTCCTTCCATATCAACATGAGGGATACCTTGGGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR CAA 90 bp AGTAACACTAAACTCCTTAATCTCATCAAGAGATTTCAAGTGACTTaGTTCCAGAAGGTGATAGAAGGCTCACTGACGCATACAATCAAC +
Preference number: 2 (lower is better)
Translates to: SNTKLLNLIKRFQVT*FQKVIEGSLTHTIN
Trigger: GTTGATTGTATGCGTCAGTGAGCCTTCTATCACCTTCTGGAACAAAGTCACTTGAAATCTCTTGATGAGATTAAGGAGTTTAGTGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CAA 90 bp GAACCAGATATTTTTAGAATTTTATCAAGCAGCTACTATGGTATTTaGAGGCCCAGATCATACTTACAAACAAAGTGGCCCTGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: EPDIFRILSSSYYGI*RPRSYLQTKWPWSL
Trigger: AAGGCTCCAGGGCCACTTTGTTTGTAAGTATGATCTGGGCCTCAAAATACCATAGTAGCTGCTTGATAAAATTCTAAAAATATCTGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTTGTACTTTTCCTCATaGGGATTTACTTTCCCTCAT +
Preference number: 2 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPLYFSS*GFTFPH
Trigger: ATGAGGGAAAGTAAATCCTCATGAGGAAAAGTACAA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 72 bp CAGCTGAGAGCTGGGCCTCTTTCCTCCTGGTGGGTCTaGGCTGTGTCGGGAGCGCCCATCTCAGCAGCGGGG +
Preference number: 3 (lower is better)
Translates to: QLRAGPLSSWWV*AVSGAPISAAG
Trigger: CCCCGCTGCTGAGATGGGCGCTCCCGACACAGCGCAGACCCACCAGGAGGAAAGAGGCCCAGCTCTCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 72 bp GGGGCTGGGGAAGCACTGGCCTGGCTCACCCTTCAGTaGGCACAGAGAAGCAGCGACAGCCAGGGAGTGACA +
Preference number: 3 (lower is better)
Translates to: GAGEALAWLTLQ*AQRSSDSQGVT
Trigger: TGTCACTCCCTGGCTGTCGCTGCTTCTCTGTGCTCACTGAAGGGTGAGCCAGGCCAGTGCTTCCCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CCA 72 bp CTCCATCGTCAGCTGAGAGCTGGGCCTCTTTCCTCCTaGTGGGTCTGCGCTGTGTCGGGAGCGCCCATCTCA +
Preference number: 3 (lower is better)
Translates to: LHRQLRAGPLSS*WVCAVSGAPIS
Trigger: TGAGATGGGCGCTCCCGACACAGCGCAGACCCACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CCA 72 bp CCGACTCCGGTTCTGCCTCCATCGTCAGCTGAGAGCTaGGCCTCTTTCCTCCTGGTGGGTCTGCGCTGTGTC +
Preference number: 3 (lower is better)
Translates to: PTPVLPPSSAES*ASFLLVGLRCV
Trigger: GACACAGCGCAGACCCACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGATGGAGGCAGAACCGGAGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 72 bp GGTGGGAGGGGCCGGGGATGGACACTCCACTGCTCGTaGTCACGGCTTTCTTGGTCACCTGCACATACACCT +
Preference number: 3 (lower is better)
Translates to: GGRGRGWTLHCS*SRLSWSPAHTP
Trigger: AGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCCCCGGCCCCTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR GCA 72 bp GCTTCTGGTGGGAGGGGCCGGGGATGGACACTCCACTaGTCGTGCTCACGGCTTTCTTGGTCACCTGCACAT +
Preference number: 3 (lower is better)
Translates to: ASGGRGRGWTLH*SCSRLSWSPAH
Trigger: ATGTGCAGGTGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCCCCGGCCCCTCCCACCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR TCA 72 bp AAAAGTGGGCTCCCAAGCCCCTCTCCTAGATCCTTCTaGAGGGCCAGCGCCAGTCCTGGGTGCCACAGCTCA +
Preference number: 3 (lower is better)
Translates to: KSGLPSPSPRSF*RASASPGCHSS
Trigger: TGAGCTGTGGCACCCAGGACTGGCGCTGGCCCTTCAGAAGGATCTAGGAGAGGGGCTTGGGAGCCCACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CCA 72 bp AGCGCCAGTCCTGGGTGCCACAGCTCACAGCCCAACTaGACAGCCACGATGTCAAAGGCGTCCCTTTCAGGA +
Preference number: 3 (lower is better)
Translates to: SASPGCHSSQPN*TATMSKASLSG
Trigger: TCCTGAAAGGGACGCCTTTGACATCGTGGCTGTCCAGTTGGGCTGTGAGCTGTGGCACCCAGGACTGGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 72 bp GAGTGTGGCTGTGTCTCTCACCGCCTGGGCTGTTTCTaGTGCAAAATCCAGGGCGCCTGCCACTGGCTTGGT +
Preference number: 3 (lower is better)
Translates to: ECGCVSHRLGCF*CKIQGACHWLG
Trigger: ACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAGACACAGCCACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR GCA 72 bp AGCGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTaGTGGGTCAAGGGACTGGGTAGCTTTGGATATCTC +
Preference number: 3 (lower is better)
Translates to: SDSQGVTRVGQL*WVKGLGSFGYL
Trigger: GAGATATCCAAAGCTACCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCTGCAATCCACTAACTaGGAGTTCAGCAAAGGCAAC +
Preference number: 3 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGLQSTN*EFSKGN
Trigger: GTTGCCTTTGCTGAACTCCAAGTTAGTGGATTGCAG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 72 bp CTACTTGTGCTAAAGCTCCCTTCCTTCCTCTCTGCATaGACGCGCGCGCGCGCACACACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: LLVLKLPSFLSA*TRARAHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAGAGGAAGGAAGGGAGCTTTAGCACAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 72 bp GTAGCTACTTGTGCTAAAGCTCCCTTCCTTCCTCTCTaGATGCACGCGCGCGCGCGCACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: VATCAKAPFLPL*MHARARTHTHT
Trigger: TGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAGAGGAAGGAAGGGAGCTTTAGCACAAGTAGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CCA 72 bp GACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTaGGTCAAGGGACTGGGTAGCTTTGGATATCTCCTT +
Preference number: 3 (lower is better)
Translates to: DSQGVTRVGQLC*VKGLGSFGYLL
Trigger: AAGGAGATATCCAAAGCTACCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGGGCTTTGTTCTTGGTaGTTGCTGCCCAGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRGLCSW*LLPRQE
Trigger: CTCCTGCCTGGGCAGCAACAACCAAGAACAAAGCCC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCCCGGGGCTTTGTTCTaGGTTGTTGCTGCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: CVPSGCGATMPACGFIKKPGALF*VVAAQA
Trigger: TGCCTGGGCAGCAACAACCAAGAACAAAGCCCCGGG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 72 bp AGGTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATaGAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: RWQGGFVPGIIQ*SHGLHFSPEPG
Trigger: CCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGGGCTTTGTTCTTGGTaGTTGCTGCCCAGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVGLCSW*LLPRQE
Trigger: CTCCTGCCTGGGCAGCAACAACCAAGAACAAAGCCC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAACAGTCCCGGGGCTTaGTTCTTGGTTGTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWNSPGA*FLVVAA
Trigger: GGCAGCAACAACCAAGAACAAAGCCCCGGGACTGTT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAGAGGAGCTGCCATCTaGTGCAGTGCTGTATCCTGC +
Preference number: 3 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWRGAAI*CSAVSC
Trigger: GCAGGATACAGCACTGCACAAGATGGCAGCTCCTCT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 72 bp TGCAGAGGAGCTGCCATCTTGTGCAGTGCTGTATCCTaGTGCCATCTTGTGCAGTGCGTGAGTGCTGAGACA +
Preference number: 3 (lower is better)
Translates to: CRGAAILCSAVS*CHLVQCVSAET
Trigger: TGTCTCAGCACTCACGCACTGCACAAGATGGCAGCAGGATACAGCACTGCACAAGATGGCAGCTCCTCTGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CCA 72 bp GGATGGACACTCCACTGCTCGTGCTCACGGCTTTCTTaGTCACCTGCACATACACCTTCCCATGGTCTTTGG +
Preference number: 3 (lower is better)
Translates to: GWTLHCSCSRLS*SPAHTPSHGLW
Trigger: CCAAAGACCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR CCA 72 bp GAGGCCAGTGGAACACCACACTGGAACCAGGAAGGGTaGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTC +
Preference number: 3 (lower is better)
Translates to: EASGTPHWNQEG*KCNLRDWLFPV
Trigger: GACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCACTGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGCTTTGTTCTTGGTTGTaGCTGCCCAGGCAGGAGAGC +
Preference number: 3 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVLCSWL*LPRQES
Trigger: GCTCTCCTGCCTGGGCAGCAACAACCAAGAACAAAG...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCCCGGGGCTTTGTTCTaGGTTGTTGCTGCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: SLQKSETPKTRPRALIPGPGALF*VVAAQA
Trigger: TGCCTGGGCAGCAACAACCAAGAACAAAGCCCCGGG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAACAGTCCCGGGGCTTaGTTCTTGGTTGTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: CVPSGCGATMPACGFIKKNSPGA*FLVVAA
Trigger: GGCAGCAACAACCAAGAACAAAGCCCCGGGACTGTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAGATTTCAAGTGACTTaGTTCCAGAAGGTGATAGAA +
Preference number: 3 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGRFQVT*FQKVIE
Trigger: TTCTATCACCTTCTGGAACAAAGTCACTTGAAATCT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 72 bp GTGGCTGCATGGTACCTGATGTACTCCCGCTCTGACTaGTGCCGATTGTCCATCGTCTTCCCTAAGCCATCT +
Preference number: 3 (lower is better)
Translates to: VAAWYLMYSRSD*CRLSIVFPKPS
Trigger: AGATGGCTTAGGGAAGACGATGGACAATCGGCATCAGTCAGAGCGGGAGTACATCAGGTACCATGCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR GCA 72 bp AGAGGAGCTGCCATCTTGTGCAGTGCTGTATCCTGCTaGCATCTTGTGCAGTGCGTGAGTGCTGAGACAATC +
Preference number: 3 (lower is better)
Translates to: RGAAILCSAVSC*HLVQCVSAETI
Trigger: GATTGTCTCAGCACTCACGCACTGCACAAGATGGCAGCAGGATACAGCACTGCACAAGATGGCAGCTCCTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 72 bp ACTCCACTGCTCGTGCTCACGGCTTTCTTGGTCACCTaGACATACACCTTCCCATGGTCTTTGGAGACAAGG +
Preference number: 3 (lower is better)
Translates to: TPLLVLTAFLVT*TYTFPWSLETR
Trigger: CCTTGTCTCCAAAGACCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR CCA 72 bp TTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTTaGTTACAGTGCCAACAAGCCCTTTTCCAAGGCCAG +
Preference number: 3 (lower is better)
Translates to: FLMQNPGRLPLA*LQCQQALFQGQ
Trigger: CTGGCCTTGGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR CCA 72 bp AGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATaGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGCTA +
Preference number: 3 (lower is better)
Translates to: RWVRPRHNPMKS*ASLQSGAWVQL
Trigger: TAGCTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGGTTTCCCCCTAAGTTaGGTAAGACTAGTTAGGAAA +
Preference number: 3 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLGFPLS*VRLVRK
Trigger: TTTCCTAACTAGTCTTACCAAACTTAGGGGGAAACC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGATGTGGATTTCTGATTaGTTGCAACAGTTCAATGGG +
Preference number: 3 (lower is better)
Translates to: LCMHARARTHTHTHTHTQMWISD*LQQFNG
Trigger: CCCATTGAACTGTTGCAACAAATCAGAAATCCACAT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGGGCTTTGTTCTTGGTaGTTGCTGCCCAGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALGLCSW*LLPRQE
Trigger: CTCCTGCCTGGGCAGCAACAACCAAGAACAAAGCCC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 72 bp CTACAAGGTGTTCACCACTTGTGGCTGCATGGTACCTaGTGTACTCCCGCTCTGACTGATGCCGATTGTCCA +
Preference number: 3 (lower is better)
Translates to: LQGVHHLWLHGT*CTPALTDADCP
Trigger: TGGACAATCGGCATCAGTCAGAGCGGGAGTACATCAGGTACCATGCAGCCACAAGTGGTGAACACCTTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR CAA 90 bp GCGATGAAGAATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTGCTCCTGTGCGCCTGCCACTGGCTaGGTTACAGTGCCAACAAGC +
Preference number: 3 (lower is better)
Translates to: AMKNSSCMLSVSLKSCSCAPATG*VTVPTS
Trigger: GCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGC...ACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTCTTCATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR-3UTR CAA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGGGACCTTAGAAAAGTaGTCAATTCGGAAAGGAGGA +
Preference number: 3 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWGTLEK*SIRKGG
Trigger: TCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCC...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR TCA 72 bp AAACAAAGTGGCCCTGGAGCCTTCAGAACATTGCGATaGGCACCCACCAAGCAGCAAGACACTCTTGGGATT +
Preference number: 3 (lower is better)
Translates to: KQSGPGAFRTLR*APTKQQDTLGI
Trigger: AATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGGCTCCAGGGCCACTTTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 72 bp ACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTaGGTAAAGACAACCGGGACCTTAGAAAAGTTGTCA +
Preference number: 3 (lower is better)
Translates to: TSVRSLGSATPC*VKTTGTLEKLS
Trigger: TGACAACTTTTCTAAGGTCCCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR GCA 72 bp CTTACAAACAAAGTGGCCCTGGAGCCTTCAGAACATTaGGATGAGCACCCACCAAGCAGCAAGACACTCTTG +
Preference number: 3 (lower is better)
Translates to: LTNKVALEPSEH*DEHPPSSKTLL
Trigger: CAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGGCTCCAGGGCCACTTTGTTTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTCTTTGTTCTTGGTTGTaGCTGCCCAGGCAGGAGAGC +
Preference number: 3 (lower is better)
Translates to: VIEGSLTHTINPSESLIFLCSWL*LPRQES
Trigger: GCTCTCCTGCCTGGGCAGCAACAACCAAGAACAAAG...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTAGAGGAGCTGCCATCTaGTGCAGTGCTGTATCCTGC +
Preference number: 3 (lower is better)
Translates to: VIEGSLTHTINPSESLIFRGAAI*CSAVSC
Trigger: GCAGGATACAGCACTGCACAAGATGGCAGCTCCTCT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 72 bp AATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTaGTCCTGTCCTTCCGCCTGGCTCTCAGAATATCGG +
Preference number: 3 (lower is better)
Translates to: NSSCMLSVSLKS*SCPSAWLSEYR
Trigger: CCGATATTCTGAGAGCCAGGCGGAAGGACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR CCA 72 bp TTGAGGCCCAGATCATACTTACAAACAAAGTGGCCCTaGAGCCTTCAGAACATTGCGATGAGCACCCACCAA +
Preference number: 3 (lower is better)
Translates to: LRPRSYLQTKWP*SLQNIAMSTHQ
Trigger: TTGGTGGGTGCTCATCGCAATGTTCTGAAGGCTCCAGGGCCACTTTGTTTGTAAGTATGATCTGGGCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGGTTTCCCCCTAAGTTaGGTAAGACTAGTTAGGAAA +
Preference number: 3 (lower is better)
Translates to: CVPSGCGATMPACGFIKKGFPLS*VRLVRK
Trigger: TTTCCTAACTAGTCTTACCAAACTTAGGGGGAAACC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGAAGGTATCCCTCATGTaGATATGGAAGGAATTATTC +
Preference number: 3 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRKVSLM*IWKELF
Trigger: GAATAATTCCTTCCATATCAACATGAGGGATACCTT...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR TCA 72 bp ACTTTTCCTCATGAGGATTTACTTTCCCTCATTCCTTaGCAACTTCCCCAAACCCGACTCCGGTTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: TFPHEDLLSLIP*QLPQTRLRFCL
Trigger: GAGGCAGAACCGGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAGGAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 72 bp ACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTaGTCCCAGCAGGAATTTAAAACCAAGGATAAGAGA +
Preference number: 3 (lower is better)
Translates to: TKNKTQGAHTRP*SQQEFKTKDKR
Trigger: TCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 72 bp ACTTCCTCAGTCAGGTCTGAGAACACCCAGCACTGCTaGGGCCCAAAGCAGATTTTCTTAGTAACACTAAAC +
Preference number: 3 (lower is better)
Translates to: TSSVRSENTQHC*GPKQIFLVTLN
Trigger: GTTTAGTGTTACTAAGAAAATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTTCTCAGACCTGACTGAGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR GCA 72 bp CTAACTTCCTCAGTCAGGTCTGAGAACACCCAGCACTaGTGCGGCCCAAAGCAGATTTTCTTAGTAACACTA +
Preference number: 3 (lower is better)
Translates to: LTSSVRSENTQH*CGPKQIFLVTL
Trigger: TAGTGTTACTAAGAAAATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTTCTCAGACCTGACTGAGGAAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTACTTACAATGCTGACTaGCACCCATGTGGTAATGGA +
Preference number: 3 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFTYNAD*HPCGNG
Trigger: TCCATTACCACATGGGTGCAAGTCAGCATTGTAAGT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCAAATGTCAAAGTGCTaGGTTGTGCAATCACAGGAG +
Preference number: 3 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFQMSKC*VVQSQE
Trigger: CTCCTGTGATTGCACAACCAAGCACTTTGACATTTG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGTTTCCTCCAAAGCTTaGGATGTTTTCCTGGTGAGA +
Preference number: 3 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFVSSKA*DVFLVR
Trigger: TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAAC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGGTTTCCCCCTAAGTTaGGTAAGACTAGTTAGGAAA +
Preference number: 3 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAGFPLS*VRLVRK
Trigger: TTTCCTAACTAGTCTTACCAAACTTAGGGGGAAACC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCTTTGTTCTTGGTTGTaGCTGCCCAGGCAGGAGAGC +
Preference number: 3 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLCSWL*LPRQES
Trigger: GCTCTCCTGCCTGGGCAGCAACAACCAAGAACAAAG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATCCAGACCAAATACAATaGGGAACGTCCATCAGTCTG +
Preference number: 3 (lower is better)
Translates to: EILYVAPRRVISTRRKKHPDQIQ*GTSISL
Trigger: CAGACTGATGGACGTTCCCAATTGTATTTGGTCTGG...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR TCA 72 bp CTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTaGCACACAATAGCTGATCATAGTCATTCCGAGGCC +
Preference number: 3 (lower is better)
Translates to: LQTKYNWERPSV*HTIADHSHSEA
Trigger: GGCCTCGGAATGACTATGATCAGCTATTGTGTGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR CCA 72 bp GCAAAAGCCAAGTTTCCATTCTGCAATCCACTAACTTaGAGTTCAGCAAAGGCAACCAAGCCTCGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: AKAKFPFCNPLT*SSAKATKPRSS
Trigger: TGAACTCCGAGGCTTGGTTGCCTTTGCTGAACTCCAAGTTAGTGGATTGCAGAATGGAAACTTGGCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTGGATTTCTGATTTGTaGCAACAGTTCAATGGGACT +
Preference number: 3 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALWISDL*QQFNGT
Trigger: AGTCCCATTGAACTGTTGCAACAAATCAGAAATCCA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGATGTGGATTTCTGATTaGTTGCAACAGTTCAATGGG +
Preference number: 3 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALMWISD*LQQFNG
Trigger: CCCATTGAACTGTTGCAACAAATCAGAAATCCACAT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTTGGAAGGAATTATTCTaGTTGACTTCAAAGCCTCCA +
Preference number: 3 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGWKELF*LTSKPP
Trigger: TGGAGGCTTTGAAGTCAACAAGAATAATTCCTTCCA...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR TCA 72 bp CTTTGGAGACAAGGCAGTGGTAGAGGTCATCGTATTTaGCTTCTAGGAAAATGGCTTCTCGATCCACGTAGT +
Preference number: 3 (lower is better)
Translates to: LWRQGSGRGHRI*LLGKWLLDPRS
Trigger: ACTACGTGGATCGAGAAGCCATTTTCCTAGAAGTCAAATACGATGACCTCTACCACTGCCTTGTCTCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR GCA 72 bp TTAACATCTGCCTCTCCTAAGGTGCAAATGTCAAAGTaGTTGGTTGTGCAATCACAGGAGATGGGCAGCTAT +
Preference number: 3 (lower is better)
Translates to: LTSASPKVQMSK*LVVQSQEMGSY
Trigger: ATAGCTGCCCATCTCCTGTGATTGCACAACCAAGCACTTTGACATTTGCACCTTAGGAGAGGCAGATGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR-3UTR CAA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCAAGGAATTATTCTTGTaGACTTCAAAGCCTCCAGAC +
Preference number: 3 (lower is better)
Translates to: CRLSWKSFMLQLISEDPAKELFL*TSKPPD
Trigger: GTCTGGAGGCTTTGAAGTCAACAAGAATAATTCCTT...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR TCA 72 bp AGAGGCTCTTTGCGTAGTTTATTTCTTGTGACAACTTaGCAGCAAGGACCTCAGATTTCACATGGACCATGG +
Preference number: 3 (lower is better)
Translates to: RGSLRSLFLVTT*QQGPQISHGPW
Trigger: CCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAATAAACTACGCAAAGAGCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR GCA 72 bp GAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTaGCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: EIIHVAVDLRGP*PFNSQSDKRWQ
Trigger: TTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR GCA 72 bp AATAATAATAACCTGAGAAAACTTACAATGCTGACTTaGACCCATGTGGTAATGGAGCACAGGTTTCCCCCT +
Preference number: 3 (lower is better)
Translates to: NNNNLRKLTMLT*THVVMEHRFPP
Trigger: AGGGGGAAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAGGTTATTATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 72 bp AGAAATGATCTTAACAAAGTCTTAGGCATTGCTGGCTaGATATCAGTTTACAAAGAGACGGGGCATTTAAGG +
Preference number: 3 (lower is better)
Translates to: RNDLNKVLGIAG*ISVYKETGHLR
Trigger: CCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCAATGCCTAAGACTTTGTTAAGATCATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR TCA 72 bp TTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACTaGTCTGTGTCACTAAATGAGATCCTATACGTAGCT +
Preference number: 3 (lower is better)
Translates to: LEKLSIRKGGGN*SVSLNEILYVA
Trigger: AGCTACGTATAGGATCTCATTTAGTGACACAGATCAGTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
3UTR TCA 72 bp AAGGATAAGAGATGCCTTTGTCAAATCTTGGTTCCATaGAAAACTTACCAACGCAGCTTTTTAATACTCCTA +
Preference number: 3 (lower is better)
Translates to: KDKRCLCQILVP*KTYQRSFLILL
Trigger: TAGGAGTATTAAAAAGCTGCGTTGGTAAGTTTTTCATGGAACCAAGATTTGACAAAGGCATCTCTTATCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCCCTTCCTTCCTCTCTaGATGCACGCGCGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGPFLPL*MHARAR
Trigger: GCGCGCGCGCGCGTGCATGCAGAGAGGAAGGAAGGG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAGCGCCAGTCCTGGGTaGCACAGCTCACAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSASPG*HSSQPN
Trigger: GTTGGGCTGTGAGCTGTGGCACCCAGGACTGGCGCT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGGCTGCGACTCTCCATaGTCCTGGCCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGGCDSP*SWPWPP
Trigger: AGGAGGCCATGGCCAGGAGCATGGAGAGTCGCAGCC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCCCTTCCTTCCTCTCTaGATGCACGCGCGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQPFLPL*MHARAR
Trigger: GCGCGCGCGCGCGTGCATGCAGAGAGGAAGGAAGGG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGGGCTGGGGAAGCACTaGCCTGGCTCACCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGGLGKH*PGSPFS
Trigger: ACTGAAGGGTGAGCCAGGCCAGTGCTTCCCCAGCCC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTCTCTGGATTCCTCCTaGAGCACCAGCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSLDSS*STSPQG
Trigger: GCCCTGTGGGCTGGTGCTTCAGGAGGAATCCAGAGA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCAGGGCGCCTGCCACTaGCTTGGTTACAGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGQGACH*LGYSAN
Trigger: GTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCCTCTTTCCTCCTGGTaGGTCTGCGCTGTGTCGGGA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGPLSSW*VCAVSG
Trigger: TCCCGACACAGCGCAGACCCACCAGGAGGAAAGAGG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCCTTCTGGCCTTGTCTaGCCCAGGGCTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQPSGLV*PRAAGQ
Trigger: CTGCCCTGCAGCCCTGGGCCAGACAAGGCCAGAAGG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGAGCCAGGCCATGGATaGCGGCTACAAGGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGEPGHG*RLQGVH
Trigger: GTGAACACCTTGTAGCCGGCATCCATGGCCTGGCTC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCCTCCTGGTGGGTCTaGGCTGTGTCGGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSSWWV*AVSGAP
Trigger: GGGCGCTCCCGACACAGCGCAGACCCACCAGGAGGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGACCCGACTCCGGTTCTaGCTCCATCGTCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGTRLRF*LHRQLR
Trigger: TCTCAGCTGACGATGGAGGCAGAACCGGAGTCGGGT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGAGCGCCAGTCCTGGGTaGCACAGCTCACAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQSASPG*HSSQPN
Trigger: GTTGGGCTGTGAGCTGTGGCACCCAGGACTGGCGCT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGACTGCAGCATCCCACTaGCTCCACCGGGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQTAASH*LHRVLG
Trigger: CCCCAGAACCCGGTGGAGGCAGTGGGATGCTGCAGT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGGGGCCCCGTGCAGCAACGCGGTTTCCGAACCCTCTGTGCTTGAGTCCTGGGGTTGACTTGCACAGCTaGGCCGGTCTCGATGACCTC +
Preference number: 4 (lower is better)
Translates to: LGPRAATRFPNPLCLSPGVDLHS*AGLDDL
Trigger: GAGGTCATCGAGACCGGCCCAGCTGTGCAAGTCAAC...CCCAGGACTCAAGCACAGAGGGTTCGGAAACCGCGTTGCTGCACGGGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp CTCTCACCGCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTACCATGGGCTTCTGGTaGGAGGGGCCGGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: LSPPGLFLMQNPGRLPLATMGFW*EGPGMD
Trigger: GTCCATCCCCGGCCCCTCCCACCAGAAGCCCATGGT...AGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp TCTCTCACCGCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTGGACCATGGGCTTCTaGTGGGAGGGGCCGGGGATG +
Preference number: 4 (lower is better)
Translates to: SLTAWAVSDAKSRAPATGWTMGF*WEGPGM
Trigger: CATCCCCGGCCCCTCCCACCAGAAGCCCATGGTCCA...GCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGGAGCAGCTCGCAGTTaGCCCTCCCATCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLGAARS*PSHLPP
Trigger: GGGTGGGAGATGGGAGGGCCAACTGCGAGCTGCTCC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGGGCTGGGGAAGCACTaGCCTGGCTCACCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQGLGKH*PGSPFS
Trigger: ACTGAAGGGTGAGCCAGGCCAGTGCTTCCCCAGCCC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGAACAGCGCTGGGCTTaGTCTCTCACCGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLEQRWA*SLTVCP
Trigger: GGGGCAGACGGTGAGAGATCAAGCCCAGCGCTGTTC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGACCGGGGCTTATAGGTaGGCACTGTGGTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGTGAYR*ALWCLS
Trigger: TGAAAGGCACCACAGTGCTCACCTATAAGCCCCGGT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTCAGCTGCCGACGGTTaGCGTCATAGAGTCGCATTC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSAADG*RHRVAF
Trigger: GAATGCGACTCTATGACGTCAACCGTCGGCAGCTGA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGAGTCCTGGGGCCGCTaGGTGTGGCTGTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLESWGR*VWLCLS
Trigger: TGAGAGACACAGCCACACTCAGCGGCCCCAGGACTC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCTTCCACGCATCCACTaGTCCACTGAGTCATCCCAG +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGLPRIH*STESSQ
Trigger: CTGGGATGACTCAGTGGATCAGTGGATGCGTGGAAG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGCGACAGCCAGGGAGTaGCACGGGTCGGCCAACTGT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHATARE*HGSANC
Trigger: ACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCGC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCCTGGAGAATCAAACTaGGGCTCCCGCAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGPGESN*GSRRLS
Trigger: AGAGAGTCTGCGGGAGCCTCAGTTTGATTCTCCAGG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGTGGGTTGCGGCCCTTaGTGCTTGGTGGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQVGCGP*CLVEVL
Trigger: CAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCAC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGCCTTCCATAGTCACTaGAAAGACCACCCGCACTGG +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGAFHSH*KDHPHW
Trigger: CCAGTGCGGGTGGTCTTTGCAGTGACTATGGAAGGC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCATGGCTTGGCACCTTaGTTGGGCCTGGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGHGLAP*LGLVCL
Trigger: CAAACAGACCAGGCCCAAGCAAGGTGCCAAGCCATG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGACTGCAGCATCCCACTaGCTCCACCGGGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLTAASH*LHRVLG
Trigger: CCCCAGAACCCGGTGGAGGCAGTGGGATGCTGCAGT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGAACTGCCCCTGGGAATaGGTTCCCCTGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLNCPWE*VPLGSS
Trigger: GGAGGAGCCCAGGGGAACCCATTCCCAGGGGCAGTT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGCGGCCCTTGCTGCTTaGTGGAGGTACTGGGCACAA +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQAALAA*WRYWAQ
Trigger: TTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTCGTCATGCCAGGGCTaGTCTTCTGCCCAGCATAAC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSSCQG*SSAQHN
Trigger: GTTATGCTGGGCAGAAGACCAGCCCTGGCATGACGA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCGCTGCCACAGCCCCTaGGCTATCTCGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHRCHSP*AISAGG
Trigger: TCCACCAGCCGAGATAGCCCAGGGGCTGTGGCAGCG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTGTTCCGTTCCCTTCTaGAACTACCCCTGGACTCCC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGCSVPF*NYPWTP
Trigger: GGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGCCCCTGAAACCTTCTaGCCTTGTCTGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLAPETF*PCLAQG
Trigger: GCCCTGGGCCAGACAAGGCCAGAAGGTTTCAGGGGC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGCCTCCACCGGGTTCTaGGGCTCCCGGACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRASTGF*GSRTGS
Trigger: GGAGCCTGTCCGGGAGCCCCAGAACCCGGTGGAGGC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGGCTTATTGGGATTGTaGGGAACTGAGGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGGLLGL*GTEEPS
Trigger: TGAGGGCTCCTCAGTTCCTCACAATCCCAATAAGCC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGCTGCGTGGTACCAATaGGCTGATTGTCCACCTGTA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGAAWYQ*ADCPPV
Trigger: TACAGGTGGACAATCAGCTCATTGGTACCACGCAGC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTACGGAGGCGGTAACTaGATACCAATAGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGYGGGN*IPIGLP
Trigger: GGGGAGTCCTATTGGTATTCAGTTACCGCCTCCGTA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCTCCTGTTGCTCTGCTaGCAGTCCCTCAACCACATT +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGLLLLC*QSLNHI
Trigger: AATGTGGTTGAGGGACTGTCAGCAGAGCAACAGGAG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCCCTGGGCTCCTCCGTaGTTGTCGTTTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQPWAPP*LSFSSD
Trigger: GTCTGAGGAAAACGACAAGCACGGAGGAGCCCAGGG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGAGAGATCAATGGCGCTaGCACAGCCCCTGGGCTATC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQRDQWR*HSPWAI
Trigger: GATAGCCCAGGGGCTGTGGCAGCGCCATTGATCTCT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCCCACTGTGAGAGAGTaGAGCTCTGGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQPTVRE*SSGGCG
Trigger: ACCACACCCACCAGAGCTGCACTCTCTCACAGTGGG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGACACTGGGCTCACTTaGTCCCAGCCATTTACTCTC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGDTGLT*SQPFTL
Trigger: GAGAGTAAATGGCTGGGAGCAAGTGAGCCCAGTGTC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGACCCGACTCCGGTTCTaGCTCCATCGTCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQTRLRF*LHRQLR
Trigger: TCTCAGCTGACGATGGAGGCAGAACCGGAGTCGGGT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGCGCCAGTCCTGGGTaGCACAGCTCACAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSASPG*HSSQPN
Trigger: GTTGGGCTGTGAGCTGTGGCACCCAGGACTGGCGCT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTGCAGTGCTGTATCCTaGTGCCATCTTGTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGCSAVS*CHLVQC
Trigger: GCACTGCACAAGATGGCAGCAGGATACAGCACTGCA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCGGGTCGGCCAACTGTaGTGGGTCAAGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHRVGQL*WVKGLG
Trigger: ACCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTTTTCTCTCCGTTGCTaGTGCTTGACTCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGFSLRC*CLTREV
Trigger: CACCTCCCGAGTCAAGCAGCAGCAACGGAGAGAAAA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGGACTACTGGACTCTTaGCCAACAGACAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGGLLDS*PTDSVG
Trigger: ACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTGGCAGACCCCTCGGTaGAGCGGGCGGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKWQTPR*SGRLRA
Trigger: AGCCCTCAGCCGCCCGCTCCACCGAGGGGTCTGCCA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGAGGATTCGAGCTGCCTaGCTGAGGAGTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQRIRAA*LRSSSW
Trigger: CCAGGAGGAACTCCTCAGCCAGGCAGCTCGAATCCT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCAGGGCGCCTGCCACTaGCTTGGTTACAGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLQGACH*LGYSAN
Trigger: GTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTGTCCCCTCGGGCTGTaGAGCTACGATGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHCPLGL*SYDACL
Trigger: CAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAGTGAAGGCTGGAGATaGAGATCACCCAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSEGWR*RSPKGP
Trigger: TGGACCCTTGGGTGATCTCCATCTCCAGCCTTCACT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGATGGCTGCCGGCGCTTaGGGGTTTTCACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLMAAGA*GFSPLL
Trigger: GAGCAGAGGTGAAAACCCCCAAGCGCCGGCAGCCAT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAAAGGCTGGAGTGGCTaGACAATCCATTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGKGWSG*TIHSPS
Trigger: GGAAGGAGAATGGATTGTTCAGCCACTCCAGCCTTT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGGTTTCCTTGCTGGATaGCTTTCAAAGCTCGGACAC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGGFLAG*LSKLGH
Trigger: GTGTCCGAGCTTTGAAAGTCATCCAGCAAGGAAACC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGGAACTTCACTGCGTTaGCTTGCACAGCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHGTSLR*LAQLGR
Trigger: CCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCTTTCCCTCATTCCTTaGCAACTTCCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGLSLIP*QLPQTR
Trigger: TCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCTTCCACGCATCCACTaGTCCACTGAGTCATCCCAG +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQLPRIH*STESSQ
Trigger: CTGGGATGACTCAGTGGATCAGTGGATGCGTGGAAG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGCAGTGCGTGAGTGCTaGGACAATCATCACCACCCC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLAVREC*DNHHHP
Trigger: GGGGTGGTGATGATTGTCTCAGCACTCACGCACTGC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGATGTCAAATGCCCCTaGAACCTTCTGGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGDVKCP*NLLALS
Trigger: AGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTGGCTCACCCTTCAGTaGGCACAGAGAAGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLWLTLQ*AQRSSD
Trigger: GTCGCTGCTTCTCTGTGCTCACTGAAGGGTGAGCCA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCCTGCGGATTGTATATaGTGTTCAAGGGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGPADCI*CSRALC
Trigger: GCACAAGGCCCTTGAACATCATATACAATCCGCAGG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTGGTACCAAACACCTTaGGCACAGAAATGTACCGGC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGWYQTP*AQKCTG
Trigger: GCCGGTACATTTCTGTGCTCAAGGTGTTTGGTACCA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGACAGACTCCCAATGCTaGCCTGTAAGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQTDSQC*PVRPGL
Trigger: GAGACCTGGCCTTACAGGGCAGCATTGGGAGTCTGT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCCTGGGCTCCTCCGTaGTTGTCGTTTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLPWAPP*LSFSSD
Trigger: GTCTGAGGAAAACGACAAGCACGGAGGAGCCCAGGG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGACAGACAGTGTGGGTTaGGGCCCTTGCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLTDSVG*GPCCLV
Trigger: CACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGGAGAGCTGCCTCCTTaGCAGGTTTCAGCGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLGELPP*QVSASH
Trigger: ATGGGACGCTGAAACCTGGCAAGGAGGCAGCTCTCC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGAGTCCAGCTCCAGCTaGTCTCGGTTTTCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQESSSS*SRFSLS
Trigger: ACTCAGCGAAAACCGAGAGCAGCTGGAGCTGGACTC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTCCTCCTGGTGGGTCTaGGCTGTGTCGGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSSWWV*AVSGAP
Trigger: GGGCGCTCCCGACACAGCGCAGACCCACCAGGAGGA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTTCCTCCTGACTGTTaGCACTGCCAGACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLPPDC*HCQTRK
Trigger: CTTCCGGGTCTGGCAGTGCCAACAGTCAGGAGGAAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACATACACCCAATCCTTTaGGCCGGGCCTGTAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHIHPIL*AGPVAA
Trigger: GGCGGCTACAGGCCCGGCCCAAAGGATTGGGTGTAT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCAGAGTGATAAAAGGTaGCAAGGTGGGTTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGQSDKR*QGGFVP
Trigger: TGGGACGAACCCACCTTGCCACCTTTTATCACTCTG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGTTGACTTGCACAGCTaGGCCGGTCTCGATGACCTC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLVDLHS*AGLDDL
Trigger: GAGGTCATCGAGACCGGCCCAGCTGTGCAAGTCAAC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGTCTCTCACCGCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCACTCAGGGCGCCTGCCACTaGCTTGGTTACAGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: VSLTAWAVSDAKSRAPATQGACH*LGYSAN
Trigger: GTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTG...AGTGGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp CTGGGGCCCCGTGCAGCAACGCGGTTTCCGAACCCTCTGTGCTTGAGTCCTGGGGTGTCTCTCACCGCCTaGGCTGTTTCTGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: LGPRAATRFPNPLCLSPGVSLTA*AVSDAK
Trigger: TTTTGCATCAGAAACAGCCCAGGCGGTGAGAGACAC...CCCAGGACTCAAGCACAGAGGGTTCGGAAACCGCGTTGCTGCACGGGGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCCTTCCCATGGTCTTTaGAGACAAGGCAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGPSHGL*RQGSGR
Trigger: TCTACCACTGCCTTGTCTCCAAAGACCATGGGAAGG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGACCATGGGCTTCTGGTaGGAGGGGCCGGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWTMGFW*EGPGMD
Trigger: GTCCATCCCCGGCCCCTCCCACCAGAAGCCCATGGT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATGGACCATGGGCTTCTaGTGGGAGGGGCCGGGGATG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRWTMGF*WEGPGM
Trigger: CATCCCCGGCCCCTCCCACCAGAAGCCCATGGTCCA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGGCCAGCGCCAGTCCTaGGTGCCACAGCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKGQRQS*VPQLTA
Trigger: GGCTGTGAGCTGTGGCACCCAGGACTGGCGCTGGCC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCGGGGCTTTGTTCTTaGTTGTTGCTGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLPGLCS*LLLPRQ
Trigger: CTGCCTGGGCAGCAACAACCAAGAACAAAGCCCCGG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCAGCCCCGCCCTAGGTaGTCTTTGGATTCCATTTTA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGQPRPR*SLDSIL
Trigger: TAAAATGGAATCCAAAGACCACCTAGGGCGGGGCTG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCCTTCTGGCCTTGTCTaGCCCAGGGCTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWPSGLV*PRAAGQ
Trigger: CTGCCCTGCAGCCCTGGGCCAGACAAGGCCAGAAGG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAAAAACGGGGCCATCTaGATCTGCAGCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGKNGAI*ICSWVM
Trigger: CATTACCCAGCTGCAGATCCAGATGGCCCCGTTTTT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCCAGAGACAGGAGACTaGGCCCTGCTATCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHPETGD*ALLSRR
Trigger: CCTTCGGGATAGCAGGGCCCAGTCTCCTGTCTCTGG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAACTCAAAGCTTCAGTaGGGGCTGCATCTTCCATTC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGNSKLQ*GLHLPF
Trigger: GAATGGAAGATGCAGCCCTCACTGAAGCTTTGAGTT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAGGACACATCTTCAATaGCCACAAACTCCGTACCTG +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGRTHLQ*PQTPYL
Trigger: CAGGTACGGAGTTTGTGGTCATTGAAGATGTGTCCT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGACAATCATCCATGCTaGATCCCAGCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLDNHPC*IPAPAA
Trigger: GGCTGCAGGAGCTGGGATTCAGCATGGATGATTGTC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCCTCACAATGAGGGCTaGCCGGACAGTGATGACTTT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQPHNEG*PDSDDF
Trigger: AAAGTCATCACTGTCCGGTCAGCCCTCATTGTGAGG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTCCAGGGAGAAGCCCTaGCACCAGCCCGGCATGCCT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSREKP*HQPGMP
Trigger: AGGCATGCCGGGCTGGTGTCAGGGCTTCTCCCTGGA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTTCATCCACTTCATATaGACGGCTGCTTTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGFIHFI*TAAFPV
Trigger: CACCGGAAAAGCAGCCGTTCATATGAAGTGGATGAA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGCTGCGTGGTACCAATaGGCTGATTGTCCACCTGTA +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQAAWYQ*ADCPPV
Trigger: TACAGGTGGACAATCAGCTCATTGGTACCACGCAGC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTTCCACGCATCCACTaGTCCACTGAGTCATCCCAG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLPRIH*STESSQ
Trigger: CTGGGATGACTCAGTGGATCAGTGGATGCGTGGAAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTCACGTTGTGCAGAATaGCCTCAGGAGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLSRCAE*PQEAAS
Trigger: TGAGGCTGCCTCCTGAGGGCATTCTGCACAACGTGA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGACAGACTCCCAATGCTaGCCTGTAAGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLTDSQC*PVRPGL
Trigger: GAGACCTGGCCTTACAGGGCAGCATTGGGAGTCTGT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGAGGCATCGTGAACTaGCCCTGGGAATGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHRGIVN*PWEWVP
Trigger: GGGAACCCATTCCCAGGGGCAGTTCACGATGCCTCT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTGAATCCCAGCTCCTaGAGCCTAGCCAGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLNPSS*SLASCN
Trigger: GTTACAGCTGGCTAGGCTGCAGGAGCTGGGATTCAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGAGATCAATGGCGCTaGCACAGCCCCTGGGCTATC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHRDQWR*HSPWAI
Trigger: GATAGCCCAGGGGCTGTGGCAGCGCCATTGATCTCT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCTACGGGCCAGCTCATaGTCCTCAAACTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLRASS*SSNWPA
Trigger: TGCAGGCCAGTTTGAGGAGCATGAGCTGGCCCGTAG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTCTGTTGTCAGTCACTaGAGCGAGACCAGCAATATC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSVVSH*SETSNI
Trigger: GATATTGCTGGTCTCGCTGCAGTGACTGACAACAGA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGAGTTGTGCTTCGCCTaGGGTCAGGCTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLELCFA*GQAFSA
Trigger: TGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCCCAGGATTCGAGCTaGCTGGCTGAGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSQDSS*LAEEFL
Trigger: GAGGAACTCCTCAGCCAGGCAGCTCGAATCCTGGGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGGATGGACACTCCACTaGTCGTGCTCACGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLGWTLH*SCSRLS
Trigger: AGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGAGTCCAGCTCCAGCTaGTCTCGGTTTTCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLESSSS*SRFSLS
Trigger: ACTCAGCGAAAACCGAGAGCAGCTGGAGCTGGACTC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACACCCGACTCCGGTTCTaGCTCCATCGTCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHTRLRF*LHRQLR
Trigger: TCTCAGCTGACGATGGAGGCAGAACCGGAGTCGGGT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGCATCACGAGCGCGGTaGAACATAAAGTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLASRAR*NIKSQV
Trigger: CACCTGGGACTTTATGTTGCACCGCGCTCGTGATGC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACCTTCTGGGGTCTGCTaGCCGTACCAGCCACCCCAT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRPSGVC*PYQPPH
Trigger: ATGGGGTGGCTGGTACGGGCAGCAGACCCCAGAAGG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCAGGAGACTGGGCCCTaGTATCCCGAAGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWQETGP*YPEGFP
Trigger: CGGGAAGCCTTCGGGATAGCAGGGCCCAGTCTCCTG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGGAGCTTCTTCCATGTaGGAAGGGAGAGACCGAGGC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHGASSM*EGRDRG
Trigger: GCCTCGGTCTCTCCCTTCCCACATGGAAGAAGCTCC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTGGCAAGCTCACTGGTaGTCTTATTCAGCACTAGAG +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGWQAHW*SYSALE
Trigger: CTCTAGTGCTGAATAAGACCACCAGTGAGCTTGCCA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTCAATAGCAGCTCGCTaGCGCCCTAAGACATCCTGC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLSIAAR*RPKTSC
Trigger: GCAGGATGTCTTAGGGCGCCAGCGAGCTGCTATTGA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGAACTGCCCCTGGGAATaGGTTCCCCTGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWNCPWE*VPLGSS
Trigger: GGAGGAGCCCAGGGGAACCCATTCCCAGGGGCAGTT...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTTCTGGAACTACCCCTaGACTCCCACTGTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQFWNYP*TPTVRE
Trigger: CTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTGTAACCTTCGGGATTaGCTGTTCCCTGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLCNLRD*LFPVPW
Trigger: CCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCTTCAGTCCGGAGCCTaGGTTCAGCTACGCCATGCT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLQSGA*VQLRHA
Trigger: AGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGACTGAGGAGCCCTCATaGGCCAGCATTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLTEEPS*ASIPVP
Trigger: AGGAACAGGAATGCTGGCCCATGAGGGCTCCTCAGT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTGGCAGACCCCTCGGTaGAGCGGGCGGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALWQTPR*SGRLRA
Trigger: AGCCCTCAGCCGCCCGCTCCACCGAGGGGTCTGCCA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGGCCTTAAGATCCAATaGGAGCTTGTTGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGGLKIQ*ELVGGE
Trigger: TTCACCTCCAACAAGCTCCCATTGGATCTTAAGGCC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTCCTGTCCTTCCGCCTaGCTCTCAGAATATCGGGGA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLSCPSA*LSEYRG
Trigger: TCCCCGATATTCTGAGAGCCAGGCGGAAGGACAGGA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGACATACACCTTCCCATaGTCTTTGGAGACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGTYTFP*SLETRQ
Trigger: CTGCCTTGTCTCCAAAGACCATGGGAAGGTGTATGT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCAAGGCCAGATATGAAACCGCTGACACCCCCTTCTGTTTTCACACCTTCCACTGGGAGGGGCCGGGGATaGACACTCCACTGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: PRPDMKPLTPPSVFTPSTGRGRG*TLHCSC
Trigger: GCACGAGCAGTGGAGTGTCCATCCCCGGCCCCTCCC...AGTGGAAGGTGTGAAAACAGAAGGGGGTGTCAGCGGTTTCATATCTGGCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTGGACCATGGGCTTCTaGTGGGAGGGGCCGGGGATG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKWTMGF*WEGPGM
Trigger: CATCCCCGGCCCCTCCCACCAGAAGCCCATGGTCCA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATGTCCCCTCGGGCTGTaGAGCTACGATGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRCPLGL*SYDACL
Trigger: CAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGCCCCTGAAACCTTCTaGCCTTGTCTGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWAPETF*PCLAQG
Trigger: GCCCTGGGCCAGACAAGGCCAGAAGGTTTCAGGGGC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGACTCTCCATGCTCCTaGCCATGGCCTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLDSPCS*PWPPVT
Trigger: AGTTACAGGAGGCCATGGCCAGGAGCATGGAGAGTC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGCCTCCACCGGGTTCTaGGGCTCCCGGACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAASTGF*GSRTGS
Trigger: GGAGCCTGTCCGGGAGCCCCAGAACCCGGTGGAGGC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCGTCCAACCATGATCTaGAGGTCCATAAATGACAGC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGRPTMI*RSINDS
Trigger: GCTGTCATTTATGGACCTCCAGATCATGGTTGGACG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACACCGGGGCTTATAGGTaGGCACTGTGGTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHTGAYR*ALWCLS
Trigger: TGAAAGGCACCACAGTGCTCACCTATAAGCCCCGGT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTACGGGATCCACAATTaGAAGAGCTGTATCATGCTC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGYGIHN*KSCIML
Trigger: GAGCATGATACAGCTCTTTCAATTGTGGATCCCGTA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGTAGCCGCCAAGAAGTaGGGTGTAAAGGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLVAAKK*GVKAQQ
Trigger: TTGCTGTGCCTTTACACCTCACTTCTTGGCGGCTAC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCAGCTGCCGACGGTTaGCGTCATAGAGTCGCATTC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSAADG*RHRVAF
Trigger: GAATGCGACTCTATGACGTCAACCGTCGGCAGCTGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGACACAATCCGGATGGTaGGGTTCAGCTGCCGACGGT +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRTQSGW*GSAADG
Trigger: ACCGTCGGCAGCTGAACCTCACCATCCGGATTGTGT...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGAACGTCCATCAGTCTaGCACACAATAGCTGATCAT +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGERPSV*HTIADH
Trigger: ATGATCAGCTATTGTGTGTCAGACTGATGGACGTTC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGTGGTACCAATGAGCTaGTTGTCCACCTGTACATCC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQVVPMS*LSTCTS
Trigger: GGATGTACAGGTGGACAATCAGCTCATTGGTACCAC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGAGTCACATAGAGCATaGAGGGCTGCGTGGTACCAA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLESHRA*RAAWYQ
Trigger: TTGGTACCACGCAGCCCTTCATGCTCTATGTGACTC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGCCAAGAAAATCCACTaGTCCCAGGATTCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLAKKIH*SQDSSC
Trigger: GCAGCTCGAATCCTGGGATCAGTGGATTTTCTTGGC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTGACAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGTGGGAGGGGCGCCTGGGCTGTTTCTaGTGCAAAATCCAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LTARTSDFTWTMGFWWEGRLGCF*CKIQGA
Trigger: GGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCG...CCCCTCCCACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCAGCTTTGGAGGAGATaGGCACGCAGTAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLQLWRR*ARSSCQ
Trigger: TTGACAGCTACTGCGTGCTCATCTCCTCCAAAGCTG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCTTTCCCTCATTCCTTaGCAACTTCCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQLSLIP*QLPQTR
Trigger: TCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTCATTCATTCTAAAGTaGGGCCCCTTTTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSFILK*GPFSLL
Trigger: GAGAAGGGAAAAGGGGCCTCACTTTAGAATGAATGA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCATCCACTGATCCACTaGGTCATCCCAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLHPLIH*VIPDSA
Trigger: AGCTGAGTCTGGGATGACTCAGTGGATCAGTGGATG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTCCACCCAACCGGACTaGAAGCAACGAGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQSTQPD*KQRGIS
Trigger: AGAAATTCCTCGTTGCTTTCAGTCCGGTTGGGTGGA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGGTCTCTTCAGATGCTaGCCCATCCCTACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQGLFRC*PIPTFP
Trigger: AGGAAAAGTAGGGATGGGTCAGCATCTGAAGAGACC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTCCGTTGCTGCTGCTTaGCTCGGGAGGTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWSVAAA*LGRWGV
Trigger: AACACCCCACCTCCCGAGTCAAGCAGCAGCAACGGA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGACTGTAGGTGAACGTTaGACTTCTCTACCACATGTG +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGTVGER*TSLPHV
Trigger: CACATGTGGTAGAGAAGTTCAACGTTCACCTACAGT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCCTGACTGTTGGCACTaGCAGACCCGGAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKPDCWH*QTRKVG
Trigger: GCCCACCTTCCGGGTCTGGCAGTGCCAACAGTCAGG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGAAGGCCACCACCTCTaGCTGGAAACGCTGAGTATG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHEGHHL*LETLSM
Trigger: CATACTCAGCGTTTCCAGGCAGAGGTGGTGGCCTTC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGAGAGGCATCGTGAACTaGCCCTGGGAATGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRRGIVN*PWEWVP
Trigger: GGGAACCCATTCCCAGGGGCAGTTCACGATGCCTCT...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGACTGCAGCATTAGCTTaGTCTGGGATGGATTTTGCA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGTAALA*SGMDFA
Trigger: TGCAAAATCCATCCCAGAGCAAGCTAATGCTGCAGT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCTCTCCAACGCGAGATaGACCTGGAAGGTAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLSNAR*TWKVSA
Trigger: GGCACTTACCTTCCAGGTGCATCTCGCGTTGGAGAG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCTAGCTGCCTGCTGTTaGCAGGATACAGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLAACC*QDTEHG
Trigger: GCCATGCTCTGTATCCTGGCAACAGCAGGCAGCTAG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTGGCAAACCACAAAGTaGACCCCGTGTGGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLWQTTK*TPCGSS
Trigger: TGAGGAACCACACGGGGTGCACTTTGTGGTTTGCCA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCCTGGGCGGTTTCCTTaGTGGATGACTTTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQPGRFP*WMTFKA
Trigger: AGCTTTGAAAGTCATCCAGCAAGGAAACCGCCCAGG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGGCAAATTCCCTCTGTaGAAATGCAAGCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGGKFPL*KCKLVR
Trigger: TCTCACAAGCTTGCATTTGCACAGAGGGAATTTGCC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGATTGGTGTTCCACCTTaGTCAGCTGTCTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGIGVPP*SAVFSW
Trigger: CCATGAAAAGACAGCTGAGCAAGGTGGAACACCAAT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTCACCGCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTACACTCCACTGCTCGTaGTCACGGCTTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSPPGLFLMQNPGRLPLATLHCS*SRLSWS
Trigger: TGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGT...AGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATCCTCCTGGTGGGTCTaGGCTGTGTCGGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGASSWWV*AVSGAP
Trigger: GGGCGCTCCCGACACAGCGCAGACCCACCAGGAGGA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGAGAACACCCAGCACTaGTGCGGCCCAAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHENTQH*CGPKQI
Trigger: AATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTTCTC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCCGGGACGCAGAGGTaGGCCTTTGATACAACTGGA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSGTQR*AFDTTG
Trigger: TCCAGTTGTATCAAAGGCCCACCTCTGCGTCCCGGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTGTTGGAGAAGGAGGTaGGGTCAAGGGATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQCWRRR*GQGIVL
Trigger: AAGGACTATCCCTTGACCCCACCTCCTTCTCCAACA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGGGAATGGGTTCCCCTaGGCTCCTCCGTGCTTGTCG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVGNGFP*APPCLS
Trigger: CGACAAGCACGGAGGAGCCCAGGGGAACCCATTCCC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGCTTGGTGGAGGTACTaGGCACAAACTCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQAWWRY*AQTHSS
Trigger: TGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGGTCTTCTGGACTACTaGACTCTTGGCCAACAGACA +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQGLLDY*TLGQQT
Trigger: TGTCTGTTGGCCAAGAGTCCAGTAGTCCAGAAGACC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCACGCCAGAGATCAATaGCGCTGCCACAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKHARDQ*RCHSPW
Trigger: CCAGGGGCTGTGGCAGCGCCATTGATCTCTGGCGTG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGCTCTGGTGGGTGTGGTaGTCAGGGTGGCAAACCACA +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRLWWVW*SGWQTT
Trigger: TGTGGTTTGCCACCCTGACCACCACACCCACCAGAG...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGAGCAAACGAATCCCCTaGCATGATAGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQSKRIP*HDSRKH
Trigger: GTGCTTCCTGCTATCATGCCAGGGGATTCGTTTGCT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGATACACCCAATCCTTTaGGCCGGGCCTGTAGCCGCC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWIHPIL*AGPVAA
Trigger: GGCGGCTACAGGCCCGGCCCAAAGGATTGGGTGTAT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCGGCTGAGGGCTTATTaGGATTGTGAGGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLRLRAY*DCEELR
Trigger: CCTCAGTTCCTCACAATCCCAATAAGCCCTCAGCCG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCCGGGGATGGACACTCCACTGCTCGTGCTCACGGCTTTCTTGGTCACCTGCACTTGTTCAGGTGGAACTaGCCCCAAAAGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: AGDGHSTARAHGFLGHLHLFRWN*PQKLHG
Trigger: TCCATGGAGCTTTTGGGGCCAGTTCCACCTGAACAA...GTGCAGGTGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCCCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp CAGGCCATGGATGCCGGCTACAAGGTGTTCACCACTTGTGGCTGCATGGTACCTAGGATTCGAGCTGCCTaGCTGAGGAGTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QAMDAGYKVFTTCGCMVPRIRAA*LRSSSW
Trigger: CCAGGAGGAACTCCTCAGCCAGGCAGCTCGAATCCT...AGGTACCATGCAGCCACAAGTGGTGAACACCTTGTAGCCGGCATCCATGGCCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTGCTCACGGCTTTCTTaGTCACCTGCACATACACCT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQCSRLS*SPAHTP
Trigger: AGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGGAGGGGCCGGGGATaGACACTCCACTGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGRGRG*TLHCSC
Trigger: GCACGAGCAGTGGAGTGTCCATCCCCGGCCCCTCCC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGCCAGCGCCAGTCCTaGGTGCCACAGCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGQRQS*VPQLTA
Trigger: GGCTGTGAGCTGTGGCACCCAGGACTGGCGCTGGCC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTGTCCCCTCGGGCTGTaGAGCTACGATGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKCPLGL*SYDACL
Trigger: CAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTTTCATCCCCCTTTCTaGAACTCTCCCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQFHPPF*NSPCSL
Trigger: AAGGGAGCAGGGAGAGTTCCAGAAAGGGGGATGAAA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGGGAGAGCTGAGAAGTaGAGCAGCTCGCAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRGRAEK*SSSQLA
Trigger: GGCCAACTGCGAGCTGCTCCACTTCTCAGCTCTCCC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGCCCCTGAAACCTTCTaGCCTTGTCTGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKAPETF*PCLAQG
Trigger: GCCCTGGGCCAGACAAGGCCAGAAGGTTTCAGGGGC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTTCCACATTGGACACTaGGGGGCAAGACTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLFHIGH*GARLRK
Trigger: CTTTCTCAGTCTTGCCCCTCAGTGTCCAATGTGGAA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGCTGAAAGATACAGCTaGACACATTCGTCATGCCAG +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQAERYS*THSSCQ
Trigger: CTGGCATGACGAATGTGTTCAGCTGTATCTTTCAGC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAACACAATCCGGATGGTaGGGTTCAGCTGCCGACGGT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRTQSGW*GSAADG
Trigger: ACCGTCGGCAGCTGAACCTCACCATCCGGATTGTGT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTCCAGGGAGAAGCCCTaGCACCAGCCCGGCATGCCT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSREKP*HQPGMP
Trigger: AGGCATGCCGGGCTGGTGTCAGGGCTTCTCCCTGGA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCGGAAACTCCACGTCTaGGTTGTGCTTCGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKRKLHV*VVLRLR
Trigger: CCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGATGTACTCCCGCTCTaGCTGATGCCGATTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHDVLPL*LMPIVH
Trigger: ATGGACAATCGGCATCAGTCAGAGCGGGAGTACATC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGATGTCAAATGCCCCTaGAACCTTCTGGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLDVKCP*NLLALS
Trigger: AGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGCGACAGCCAGGGAGTaGCACGGGTCGGCCAACTGT +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFATARE*HGSANC
Trigger: ACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCGC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTTCAGAACATTGCGATaGGCACCCACCAAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLFRTLR*APTKQQ
Trigger: TTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTCTTGGACTTCCTTTTaGTTTTTCCGGGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQSWTSF*FFRDAE
Trigger: CTCTGCGTCCCGGAAAAAGCAAAAGGAAGTCCAAGA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCATTGCGTGGTTGTCTaGAGTGGAGCCGATTCCAAA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLHCVVV*SGADSK
Trigger: TTTGGAATCGGCTCCACTGCAGACAACCACGCAATG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTGTGGGTTGCGGCCCTTaGTGCTTGGTGGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVVGCGP*CLVEVL
Trigger: CAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCAC...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAAATTCCTTTCCACCTaGAATTTCAGCCTACAAGGC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGKFLST*NFSLQG
Trigger: GCCTTGTAGGCTGAAATTGCAGGTGGAAAGGAATTT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGGAGAGCTGCCTCCTTaGCAGGTTTCAGCGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWGELPP*QVSASH
Trigger: ATGGGACGCTGAAACCTGGCAAGGAGGCAGCTCTCC...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGCTGTATGGAGAGCTaGCTCCTTGCCAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSCMES*LLARFQ
Trigger: CTGAAACCTGGCAAGGAGGCAGCTCTCCATACAGCT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTCCACGTCTGAGTTGTaGTTCGCCTGCGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWSTSEL*FACGQA
Trigger: AGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CAGGCCATGGATGCCGGCTACAAGGTGTTCACCACTTGTGGCTGCATGGTACCTGTGAGTTTGAAGAGCTaGTCCTGTCCTTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QAMDAGYKVFTTCGCMVPVSLKS*SCPSAW
Trigger: CCAGGCGGAAGGACAGGAGCAGCTCTTCAAACTCAC...AGGTACCATGCAGCCACAAGTGGTGAACACCTTGTAGCCGGCATCCATGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAATCCCCCAGTAAAGTaGAATCGACATCCCAATAGA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGNPPVK*NRHPNR
Trigger: TCTATTGGGATGTCGATTGCACTTTACTGGGGGATT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTGCAGTGCTGTATCCTaGTGCCATCTTGTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHCSAVS*CHLVQC
Trigger: GCACTGCACAAGATGGCAGCAGGATACAGCACTGCA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACATCCACTGCTCCTGTTaGTCTGCTGACAGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHIHCSC*SADSPS
Trigger: TGAGGGACTGTCAGCAGAGCAACAGGAGCAGTGGAT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGCCAGACCCGGAAGGTaGGCAAAACATCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKARPGR*AKHPAS
Trigger: GGAAGCCGGATGTTTTGCCCACCTTCCGGGTCTGGC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCAGGATATTCCACATTaGACACTGAGGGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQQDIPH*TLRGKT
Trigger: AGTCTTGCCCCTCAGTGTCCAATGTGGAATATCCTG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCAGTTTGGTGTTCACTaGATCCTGAAGTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQQFGVH*ILKSRL
Trigger: GAGTCTGGACTTCAGGATCCAGTGAACACCAAACTG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGCTTGGTGGAGGTACTaGGCACAAACTCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLAWWRY*AQTHSS
Trigger: TGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTGCGGCCCTTGCTGCTTaGTGGAGGTACTGGGCACAA +
Preference number: 4 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVAALAA*WRYWAQ
Trigger: TTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGC...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGGCCAACAGACAGTGTaGGTTGCGGCCCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVGQQTV*VAALAA
Trigger: AGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGGACTACTGGACTCTTaGCCAACAGACAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHGLLDS*PTDSVG
Trigger: ACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGCAGACATGGTCTTCTaGACTACTGGACTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHADMVF*TTGLLA
Trigger: GGCCAAGAGTCCAGTAGTCCAGAAGACCATGTCTGC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCCAGGTGCCTTTCATTaGACACAGGAAGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHPGAFH*TQEGKT
Trigger: GGTCTTCCCTTCCTGTGTCCAATGAAAGGCACCTGG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCCAGCTCTGGTGGGTGTaGTGGTCAGGGTGGCAAACC +
Preference number: 4 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGQLWWV*WSGWQT
Trigger: GGTTTGCCACCCTGACCACCACACCCACCAGAGCTG...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAGAGTGCAGCTCTGGTaGGTGTGGTGGTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKRVQLW*VWWSGW
Trigger: CCACCCTGACCACCACACCCACCAGAGCTGCACTCT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGTGTAACCTTCGGGATTaGCTGTTCCCTGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRCNLRD*LFPVPW
Trigger: CCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACA...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTGGAACCAGGAAGGGTaGAAATGTAACCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQWNQEG*KCNLRD
Trigger: ATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACTTCAGTCCGGAGCCTaGGTTCAGCTACGCCATGCT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRLQSGA*VQLRHA
Trigger: AGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCTGAGGAGTTCCTCCTaGAAATGTTTGAGGATATCA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGLRSSS*KCLRIS
Trigger: TGATATCCTCAAACATTTCCAGGAGGAACTCCTCAG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCAGGGCGCCTGCCACTaGCTTGGTTACAGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKQGACH*LGYSAN
Trigger: GTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTTCCCATGGTCTTTaGAGACAAGGCAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLPSHGL*RQGSGR
Trigger: TCTACCACTGCCTTGTCTCCAAAGACCATGGGAAGG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCTGTGTCTCTCACCGCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCTGCTCACGGCTTTCTTaGTCACCTGCACATACACCT +
Preference number: 4 (lower is better)
Translates to: AVSLTAWAVSDAKSRAPACSRLS*SPAHTP
Trigger: AGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCA...GGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAGACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGGGAGGGGCCGGGGATaGACACTCCACTGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSGRGRG*TLHCSC
Trigger: GCACGAGCAGTGGAGTGTCCATCCCCGGCCCCTCCC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCACCATGGGCTTCTGGTaGGAGGGGCCGGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGTMGFW*EGPGMD
Trigger: GTCCATCCCCGGCCCCTCCCACCAGAAGCCCATGGT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATGGACCATGGGCTTCTaGTGGGAGGGGCCGGGGATG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAWTMGF*WEGPGM
Trigger: CATCCCCGGCCCCTCCCACCAGAAGCCCATGGTCCA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATCGTCAGCTGAGAGCTaGGCCTCTTTCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRSSAES*ASFLLV
Trigger: CACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGGGAGAGCTGAGAAGTaGAGCAGCTCGCAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVGRAEK*SSSQLA
Trigger: GGCCAACTGCGAGCTGCTCCACTTCTCAGCTCTCCC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTCCTTGTCATCTGTaGACAGCAGGCCTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLPPCHL*TAGLLL
Trigger: TAAAAGGAGGCCTGCTGTCCACAGATGACAAGGAGG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTCATCATCACTAAACTaGGTCTCTTCAGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSSSLN*VSSDAD
Trigger: GTCAGCATCTGAAGAGACCCAGTTTAGTGATGATGA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCTCTCACCGCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCAATCCTTTCCAGCTCTaGCACTGTGTGACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SLTAWAVSDAKSRAPATGNPFQL*HCVTLA
Trigger: TGCCAAGGTCACACAGTGCCAGAGCTGGAAAGGATT...GCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGAACTCAAAGCTTCAGTaGGGGCTGCATCTTCCATTC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLNSKLQ*GLHLPF
Trigger: GAATGGAAGATGCAGCCCTCACTGAAGCTTTGAGTT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGCAGAGGTGGGCCTTTaGTACAACTGGAAGACATTA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLAEVGL*YNWKTL
Trigger: TAATGTCTTCCAGTTGTATCAAAGGCCCACCTCTGC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACACTCTCCATGGCATGTaGGGTCACTTAGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHTLHGM*GHLETD
Trigger: GTCTGTCTCTAAGTGACCTCACATGCCATGGAGAGT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCTGCCTGGAAACGCTaGGTATGCACATACTGCACA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSAWKR*VCTYCT
Trigger: TGTGCAGTATGTGCATACTCAGCGTTTCCAGGCAGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGATCCAGGAGAACCCGTaGACAGCGCTGGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKIQENP*TALGLI
Trigger: GATCAAGCCCAGCGCTGTTCACGGGTTCTCCTGGAT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGATCCAGGAGAACCCGTaGACAGCGCTGGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: GTPHWNQEGWKCNLRDWLIQENP*TALGLI
Trigger: GATCAAGCCCAGCGCTGTTCACGGGTTCTCCTGGAT...CAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTACGGGATCCACAATTaGAAGAGCTGTATCATGCTC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQYGIHN*KSCIML
Trigger: GAGCATGATACAGCTCTTTCAATTGTGGATCCCGTA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGACAATCATCCATGCTaGATCCCAGCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRDNHPC*IPAPAA
Trigger: GGCTGCAGGAGCTGGGATTCAGCATGGATGATTGTC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCAGACGGGAAAAGGTaGGTTCAGCGAGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSDGKR*VQREEH
Trigger: ATGTTCCTCTCGCTGAACTCACCTTTTCCCGTCTGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACCGCACTGGTGGGAGTaGAGAGAAATAAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRPHWWE*REINLG
Trigger: CCCCAGGTTTATTTCTCTTCACTCCCACCAGTGCGG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGCCTCACAATGAGGGCTaGCCGGACAGTGATGACTTT +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRPHNEG*PDSDDF
Trigger: AAAGTCATCACTGTCCGGTCAGCCCTCATTGTGAGG...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGAACGTCCATCAGTCTaGCACACAATAGCTGATCAT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQERPSV*HTIADH
Trigger: ATGATCAGCTATTGTGTGTCAGACTGATGGACGTTC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCAGGCATAATCCAATaGAGTCATGGGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLPGIIQ*SHGLHF
Trigger: GAAGTGAAGCCCATGACTTCATTGGATTATGCCTGG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGGTGGAGCGGGCGGCTaGGGGCTTATTGGGATTGTG +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFGGAGG*GLIGIV
Trigger: CACAATCCCAATAAGCCCTCAGCCGCCCGCTCCACC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATTCGAGCTGCCTGGCTaGGGAGTTCCTCCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRFELPG*GVPPGN
Trigger: ATTTCCAGGAGGAACTCCTCAGCCAGGCAGCTCGAA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGACAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGTGGGAGGGTTCGAGCTGCCTGGCTaGGGAGTTCCTCCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LDSKDLRFHMDHGLLVGGFELPG*GVPPGN
Trigger: ATTTCCAGGAGGAACTCCTCAGCCAGGCAGCTCGAA...CCCTCCCACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATGGCTGCATGGTACCTaGTGTACTCCCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRWLHGT*CTPALT
Trigger: AGTCAGAGCGGGAGTACATCAGGTACCATGCAGCCA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAAGCCCTTTTTGGCTGCATGGTACCTaGTGTACTCCCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: AKSRAPATGLVTVPTSPFWLHGT*CTPALT
Trigger: AGTCAGAGCGGGAGTACATCAGGTACCATGCAGCCA...AAAAGGGCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAGAGGTCATCGTATTTaGCTTCTAGGAAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGRGHRI*LLGKWL
Trigger: AAGCCATTTTCCTAGAAGTCAAATACGATGACCTCT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGGGGCCCCGTGCAGCAACGCGGTTTCCGAACCCTCTGTGCTTGAGTCCTGGGGTAGTTTATTTCTTGTaGCAACTTGACAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LGPRAATRFPNPLCLSPGVVYFL*QLDSKD
Trigger: GTCCTTGCTGTCAAGTTGTCACAAGAAATAAACTAC...CCCAGGACTCAAGCACAGAGGGTTCGGAAACCGCGTTGCTGCACGGGGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGCGACAGCCAGGGAGTaGCACGGGTCGGCCAACTGT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSATARE*HGSANC
Trigger: ACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCGC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTCCTGTAACTCCATCTaGGGCAAATCCCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLSCNSI*GKSPSK
Trigger: TTTACTGGGGGATTTGCCTCAGATGGAGTTACAGGA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCCTGGAGAATCAAACTaGGGCTCCCGCAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWPGESN*GSRRLS
Trigger: AGAGAGTCTGCGGGAGCCTCAGTTTGATTCTCCAGG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCCTGACTGTTGGCACTaGCAGACCCGGAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALPDCWH*QTRKVG
Trigger: GCCCACCTTCCGGGTCTGGCAGTGCCAACAGTCAGG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGTCCAACTTCACGTTGTaGAGAATGCCCTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRSNFTL*RMPSGG
Trigger: GCCTCCTGAGGGCATTCTGCACAACGTGAAGTTGGA...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGAGACAGACTCCCAATaGTGCCCTGTAAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRETDSQ*CPVRPG
Trigger: ACCTGGCCTTACAGGGCAGCATTGGGAGTCTGTCTC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGAAGGCCACCACCTCTaGCTGGAAACGCTGAGTATG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWEGHHL*LETLSM
Trigger: CATACTCAGCGTTTCCAGGCAGAGGTGGTGGCCTTC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGACAGACAGTGTGGGTTaGGGCCCTTGCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVTDSVG*GPCCLV
Trigger: CACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGACTACTATCCTCTGGTaGCTTCGAGTATTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLTTILW*LRVFSR
Trigger: CCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACTGAATCCCAGCTCCTaGAGCCTAGCCAGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRLNPSS*SLASCN
Trigger: GTTACAGCTGGCTAGGCTGCAGGAGCTGGGATTCAG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCTTAAACAACCAACTTaGTGCCTTTTTCAATTGGCC +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGLKQPT*CLFQLA
Trigger: GGCCAATTGAAAAAGGCAGCAAGTTGGTTGTTTAAG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGATGGAGACGACTAGCTaGCTGCTGTTGCCAGGATAC +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRMETTS*LLLPGY
Trigger: GTATCCTGGCAACAGCAGGCAGCTAGTCGTCTCCAT...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGATCTTTACAGTAATCTaGCATCCACGATTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGIFTVI*HPRFLG
Trigger: ACCAAGGAATCGTGGATGGCAGATTACTGTAAAGAT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCACAGGGTAGCAAGTTaGAGATTACCACAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLHRVAS*RLPQLA
Trigger: TGCCAACTGTGGTAATCTGCAACTTGCTACCCTGTG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGGGGCCCCGTGCAGCAACGCGGTTTCCGAACCCTCTGTGCTTGAGTCCTGGGGGATTCTTTAATTTCTaGAGCTCTTGTTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LGPRAATRFPNPLCLSPGGFFNF*SSCSVT
Trigger: TGTCACCGAACAAGAGCTGCAGAAATTAAAGAATCC...CCCAGGACTCAAGCACAGAGGGTTCGGAAACCGCGTTGCTGCACGGGGCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAGCACTTCCAATTCCTaGTCTGTATCTGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSTSNS*SVSGFF
Trigger: AAAGAATCCAGATACAGAGCAGGAATTGGAAGTGCT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGTGAGTTTGAAGAGCTaGTCCTGTCCTTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRVSLKS*SCPSAW
Trigger: CCAGGCGGAAGGACAGGAGCAGCTCTTCAAACTCAC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp ACTGGTCAGTCCACCAATGATACCATGAGCCAGGCCATGGATGCCGGCTACAAGGGATGGACACTCCACTaGTCGTGCTCACGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TGQSTNDTMSQAMDAGYKGWTLH*SCSRLS
Trigger: AGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCC...CTTGTAGCCGGCATCCATGGCCTGGCTCATGGTATCATTGGTGGACTGACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTTCAAAAGAGCAGATaGAAACACAGGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLQKSR*KHRLQD
Trigger: GTCCTGGAGCCTGTGTTTGCATCTGCTCTTTTGAAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTTCCCTTCTGGGGTCTaGTGCCCGTACCAGCCACCC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGFPSGV*CPYQPP
Trigger: GGGTGGCTGGTACGGGCAGCAGACCCCAGAAGGGAA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTCCGCCAGGAGGAGCTaGGACTCCACCAGAACCTCG +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSARRS*DSTRTS
Trigger: CGAGGTTCTGGTGGAGTCGCAGCTCCTCCTGGCGGA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGAAATGTACCGGCCATTaGTCTCAACACCAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLKCTGH*SQHQAA
Trigger: TGCAGCTTGGTGTTGAGAGCAATGGCCGGTACATTT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCTTCCTCCTGACTGTTaGCACTGCCAGACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKLPPDC*HCQTRK
Trigger: CTTCCGGGTCTGGCAGTGCCAACAGTCAGGAGGAAG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGGAGCTTCTTCCATGTaGGAAGGGAGAGACCGAGGC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKGASSM*EGRDRG
Trigger: GCCTCGGTCTCTCCCTTCCCACATGGAAGAAGCTCC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATCCGGGACGCAGAGGTaGGCCTTTGATACAACTGGA +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRSGTQR*AFDTTG
Trigger: TCCAGTTGTATCAAAGGCCCACCTCTGCGTCCCGGA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGGGCAGCCTCATTGCGTaGTTGTCTGCAGTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: RHNPMKSWASLQSGAWVQGSLIA*LSAVEP
Trigger: CGGCTCCACTGCAGACAACCACGCAATGAGGCTGCC...CTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGCTCCATGGAGGCATGTaGCTCCAACTTCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRLHGGM*LQLHVV
Trigger: CACAACGTGAAGTTGGAGCCACATGCCTCCATGGAG...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCAGTTTGGTGTTCACTaGATCCTGAAGTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLQFGVH*ILKSRL
Trigger: GAGTCTGGACTTCAGGATCCAGTGAACACCAAACTG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCCTCAGACTGTGTTTaGGAATACCCGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSSDCV*EYPLGK
Trigger: CTTCCCCAACGGGTATTCCCAAACACAGTCTGAGGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGGGAATGGGTTCCCCTaGGCTCCTCCGTGCTTGTCG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALGNGFP*APPCLS
Trigger: CGACAAGCACGGAGGAGCCCAGGGGAACCCATTCCC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGGAATGGGTTCCCCTaGGCTCCTCCGTGCTTGTCG +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGNGFP*APPCLS
Trigger: CGACAAGCACGGAGGAGCCCAGGGGAACCCATTCCC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAACTGCCCCTGGGAATaGGTTCCCCTGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALNCPWE*VPLGSS
Trigger: GGAGGAGCCCAGGGGAACCCATTCCCAGGGGCAGTT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTCCACTACTATCCTCTaGTGCCTTCGAGTATTCTCT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQSTTIL*CLRVFS
Trigger: AGAGAATACTCGAAGGCACCAGAGGATAGTAGTGGA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGCTGGGCTATCTCGGCTaGTGGAGGCCAAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVLGYLG*WRPRKE
Trigger: CTCTTTCCTTGGCCTCCACCAGCCGAGATAGCCCAG...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCTGGGCTATCTCGGCTaGTGGAGGCCAAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKLGYLG*WRPRKE
Trigger: CTCTTTCCTTGGCCTCCACCAGCCGAGATAGCCCAG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCTGGGCTATCTCGGCTaGTGGAGGCCAAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVLGYLG*WRPRKE
Trigger: CTCTTTCCTTGGCCTCCACCAGCCGAGATAGCCCAG...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCCGCTGCCACAGCCCCTaGGCTATCTCGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CRLSWKSFMLQLISEDPARCHSP*AISAGG
Trigger: TCCACCAGCCGAGATAGCCCAGGGGCTGTGGCAGCG...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCACGCCAGAGATCAATaGCGCTGCCACAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALHARDQ*RCHSPW
Trigger: CCAGGGGCTGTGGCAGCGCCATTGATCTCTGGCGTG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAACGAGGTTTGGCCTTaGCTTCTAGCTTCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHNEVWP*LLASVE
Trigger: CTCGACTGAAGCTAGAAGCCAAGGCCAAACCTCGTT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAAAGTGCACCCCGTGTaGTTCCTCAGAGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWKVHPV*FLRAKG
Trigger: CCCCTTTGCTCTGAGGAACCACACGGGGTGCACTTT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTGTGGTGGTCAGGGTaGCAAACCACAAAGTGCACC +
Preference number: 4 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWVWWSG*QTTKCT
Trigger: GGTGCACTTTGTGGTTTGCCACCCTGACCACCACAC...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGATTTGTTCTGCTGCTTaGGCTGCCAATCGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLICSAA*AANRRG
Trigger: TCCTCTACGATTGGCAGCCCAAGCAGCAGAACAAAT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGTGGAACACCACACTaGAACCAGGAAGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSGTPH*NQEGWK
Trigger: TTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCACT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCAGAGTGATAAAAGGTaGCAAGGTGGGTTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHQSDKR*QGGFVP
Trigger: TGGGACGAACCCACCTTGCCACCTTTTATCACTCTG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTTGTTCAGGTGGAACTaGCCCCAAAAGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLFRWN*PQKLHG
Trigger: TCCATGGAGCTTTTGGGGCCAGTTCCACCTGAACAA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAGGATTCGAGCTGCCTaGCTGAGGAGTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVRIRAA*LRSSSW
Trigger: CCAGGAGGAACTCCTCAGCCAGGCAGCTCGAATCCT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAAGCCCTTTTTCCTGTCCTTCCGCCTaGCTCTCAGAATATCGGGGA +
Preference number: 4 (lower is better)
Translates to: AKSRAPATGLVTVPTSPFSCPSA*LSEYRG
Trigger: TCCCCGATATTCTGAGAGCCAGGCGGAAGGACAGGA...AAAAGGGCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGACATACACCTTCCCATaGTCTTTGGAGACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLTYTFP*SLETRQ
Trigger: CTGCCTTGTCTCCAAAGACCATGGGAAGGTGTATGT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGGCCTCTTTCCTCCTaGTGGGTCTGCGCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGPLSS*WVCAVS
Trigger: CGACACAGCGCAGACCCACCAGGAGGAAAGAGGCCC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGGGCCTCTTTCCTCCTaGTGGGTCTGCGCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAGPLSS*WVCAVS
Trigger: CGACACAGCGCAGACCCACCAGGAGGAAAGAGGCCC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGGCCAGCGCCAGTCCTaGGTGCCACAGCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLGQRQS*VPQLTA
Trigger: GGCTGTGAGCTGTGGCACCCAGGACTGGCGCTGGCC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATGTCCCCTCGGGCTGTaGAGCTACGATGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGACPLGL*SYDACL
Trigger: CAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGGAGCAGCTCGCAGTTaGCCCTCCCATCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSGAARS*PSHLPP
Trigger: GGGTGGGAGATGGGAGGGCCAACTGCGAGCTGCTCC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCAAACAAAGTGGCCCTaGAGCCTTCAGAACATTGCG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHQTKWP*SLQNIA
Trigger: CGCAATGTTCTGAAGGCTCCAGGGCCACTTTGTTTG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGTCACATTTACACAGTaGACTGGGCACTCTCACATG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLVTFTQ*TGHSHM
Trigger: CATGTGAGAGTGCCCAGTCCACTGTGTAAATGTGAC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAGCCGCCTCTCAAAGTaGCTGTGCGCCGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSRLSK*LCAGFL
Trigger: GAGAAATCCGGCGCACAGCCACTTTGAGAGGCGGCT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
3UTR CAA 72 bp CTCCCATCTCCCACCCAGCCCCGCCCTAGGTGGTCTTaGGATTCCATTTTAACATCTGCCTCTCCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: LPSPTQPRPRWS*DSILTSASPKV
Trigger: CACCTTAGGAGAGGCAGATGTTAAAATGGAATCCAAAGACCACCTAGGGCGGGGCTGGGTGGGAGATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CAA 72 bp GGGATGGACACTCCACTGCTCGTGCTCACGGCTTTCTaGGTCACCTGCACATACACCTTCCCATGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GMDTPLLVLTAF*VTCTYTFPWSL
Trigger: CAAAGACCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCCACAAAATTCTGGATaGATATCTGTCCCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQPQNSG*ISVPSV
Trigger: GACACTTGGGACAGATATTCATCCAGAATTTTGTGG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTGAACCTGAAGCTCTaGTATACAAAAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLNLKL*YTKGGL
Trigger: CAAGCCACCTTTTGTATATCAGAGCTTCAGGTTCAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGTGTTCACTGGATCCTaGAGTCCAGACTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRVFTGS*SPDSME
Trigger: CTCCATGGAGTCTGGACTTCAGGATCCAGTGAACAC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGTGTTCACTGGATCCTaGAGTCCAGACTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWVFTGS*SPDSME
Trigger: CTCCATGGAGTCTGGACTTCAGGATCCAGTGAACAC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGACCCGTTGGGGAAGCTaGAGGCACAGATTCCTTATC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWTRWGS*RHRFLI
Trigger: GATAAGGAATCTGTGCCTTCAGCTTCCCCAACGGGT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCAGCAAGAGGCATCGTaGACTGCCCCTGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALQQEAS*TAPGNG
Trigger: CCCATTCCCAGGGGCAGTTCACGATGCCTCTTGCTG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTCAGCAAGAGGCATCGTaGACTGCCCCTGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGQQEAS*TAPGNG
Trigger: CCCATTCCCAGGGGCAGTTCACGATGCCTCTTGCTG...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGATGTCTGGCACAGTATaGCTTATTTCTTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGMSGTV*LISLSK
Trigger: TTTGGACAAAGAAATAAGTCATACTGTGCCAGACAT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCAGAGAGCAGTGGACTaGGGAGAGATTGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWQRAVD*GEIAMD
Trigger: ATCCATGGCAATCTCTCCTCAGTCCACTGCTCTCTG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCCCACCAACTCCATTTaGATTTGTACGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHPTNSI*ICTGST
Trigger: TGTGGATCCCGTACAAATTCAAATGGAGTTGGTGGG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTCCAGGGCTTGTAACTaGATCTCCAGGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVSRACN*ISRTGG
Trigger: CCCACCTGTCCTGGAGATTCAGTTACAAGCCCTGGA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTCCAGGGCTTGTAACTaGATCTCCAGGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGSRACN*ISRTGG
Trigger: CCCACCTGTCCTGGAGATTCAGTTACAAGCCCTGGA...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGTCTTGTCCCTTCTCTaGTTTCCTCTCCAACGCGAG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWVLSLL*FPLQRE
Trigger: CTCGCGTTGGAGAGGAAATCAGAGAAGGGACAAGAC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTCAGCTGCCGACGGTTaGCGTCATAGAGTCGCATTC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSAADG*RHRVAF
Trigger: GAATGCGACTCTATGACGTCAACCGTCGGCAGCTGA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTTCAGCTACGCCATGCTaGGTAAAGACAACCGGGACC +
Preference number: 4 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVSATPC*VKTTGT
Trigger: GGTCCCGGTTGTCTTTACTCAGCATGGCGTAGCTGA...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCTTTGTGTCTTGGGTaGGACATCCAAAACGAGCTC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSLCLG*DIQNEL
Trigger: GAGCTCGTTTTGGATGTCTCACCCAAGACACAAAGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACGGAAACTCCACGTCTaGGTTGTGCTTCGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGARKLHV*VVLRLR
Trigger: CCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAAGCCCTTTTCCGCTGCGTGGTACCAATaGGCTGATTGTCCACCTGTA +
Preference number: 4 (lower is better)
Translates to: KIQGACHWLGYSANKPFSAAWYQ*ADCPPV
Trigger: TACAGGTGGACAATCAGCTCATTGGTACCACGCAGC...GGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp TTGACAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGTGGGAGGGGGAGTCACATAGAGCATaGAGGGCTGCGTGGTACCAA +
Preference number: 4 (lower is better)
Translates to: LTARTSDFTWTMGFWWEGESHRA*RAAWYQ
Trigger: TTGGTACCACGCAGCCCTTCATGCTCTATGTGACTC...CCCCTCCCACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCTGGGCCGGTCTCGATaGCCTCATTCTCATTGCTCA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKLGRSR*PHSHCS
Trigger: TGAGCAATGAGAATGAGGTCATCGAGACCGGCCCAG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGAACTTCACTGCGTTaGCTTGCACAGCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGTSLR*LAQLGR
Trigger: CCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCACGCAGTAGCTGTCAATGTTCTCCACAGCGATGAAGAATTCGTCCTGTATGAGTCCTGGGGCCGCTaGGTGTGGCTGTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: EHAVAVNVLHSDEEFVLYESWGR*VWLCLS
Trigger: TGAGAGACACAGCCACACTCAGCGGCCCCAGGACTC...ATACAGGACGAATTCTTCATCGCTGTGGAGAACATTGACAGCTACTGCGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTTGTACTTTTCCTCATaGGGATTTACTTTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGLYFSS*GFTFPH
Trigger: ATGAGGGAAAGTAAATCCTCATGAGGAAAAGTACAA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTCATTCATTCTAAAGTaGGGCCCCTTTTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLSFILK*GPFSLL
Trigger: GAGAAGGGAAAAGGGGCCTCACTTTAGAATGAATGA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTGGGCCTGGTCTGTTTaGAGGGTAGCAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVWAWSV*RVAGSS
Trigger: TGAAGAGCCTGCTACCCTTCAAACAGACCAGGCCCA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTTCTCCTCCAGGGCTTaGAGTAGTGCTTTCTTACGT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHFSSRA*SSAFLR
Trigger: ACGTAAGAAAGCACTACTTCAAGCCCTGGAGGAGAA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGTTTACTCTCCTCAATaGAATCACCCACTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQVYSPQ*NHPLAN
Trigger: GTTTGCTAGTGGGTGATTTCATTGAGGAGAGTAAAC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCCGTTGCTGCTGCTTaGCTCGGGAGGTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSVAAA*LGRWGV
Trigger: AACACCCCACCTCCCGAGTCAAGCAGCAGCAACGGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAGGAGGCAGCCTCATTaGGTGGTTGTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKRRQPH*VVVCSG
Trigger: TCCACTGCAGACAACCACGCAATGAGGCTGCCTCCT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTCACGTTGTGCAGAATaGCCTCAGGAGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSRCAE*PQEAAS
Trigger: TGAGGCTGCCTCCTGAGGGCATTCTGCACAACGTGA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGACAGACTCCCAATGCTaGCCTGTAAGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVTDSQC*PVRPGL
Trigger: GAGACCTGGCCTTACAGGGCAGCATTGGGAGTCTGT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGTGGGTTGCGGCCCTTaGTGCTTGGTGGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALVGCGP*CLVEVL
Trigger: CAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCAC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTACAGACAGTGTGGGTTaGGGCCCTTGCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VARWVRPRHNPMKSWASLTDSVG*GPCCLV
Trigger: CACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGT...AAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCTGAATCCCAGCTCCTaGAGCCTAGCCAGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKLNPSS*SLASCN
Trigger: GTTACAGCTGGCTAGGCTGCAGGAGCTGGGATTCAG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCCTAGCTGCCTGCTGTTaGCAGGATACAGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGLAACC*QDTEHG
Trigger: GCCATGCTCTGTATCCTGGCAACAGCAGGCAGCTAG...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAAGACGACTAGCTGCCTaGTGTTGCCAGGATACAGAG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRRRLAA*CCQDTE
Trigger: CTCTGTATCCTGGCAACAGCAGGCAGCTAGTCGTCT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGTGATGACTTTCCGTaGACTGCCTTCCATAGTCAC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSDDFP*TAFHSH
Trigger: GTGACTATGGAAGGCAGTGCACGGAAAGTCATCACT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGAGGAGATATATGGTATaGCCAGGCTGTCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQRRYMV*PGCLKI
Trigger: GATTTTCAGACAGCCTGGGCATACCATATATCTCCT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCTACGGGCCAGCTCATaGTCCTCAAACTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VARWVRPRHNPMKSWASLLRASS*SSNWPA
Trigger: TGCAGGCCAGTTTGAGGAGCATGAGCTGGCCCGTAG...AAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCTGCCTGTTCCCTCCTaGAAGCCAGAGAATGTATAT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLPVPS*KPENVY
Trigger: ATATACATTCTCTGGCTTGCAGGAGGGAACAGGCAG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTGACAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGTGGGAGGGGACTGGGGAACTTCACTaGGTTGACTTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTARTSDFTWTMGFWWEGTGELH*VDLHSW
Trigger: CCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGT...CCCCTCCCACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGTAGATGTTGGTCAGTaGACTCTTACTGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLVDVGQ*TLTGEL
Trigger: AAGTTCCCCAGTAAGAGTGCACTGACCAACATCTAC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGTCTCTCACCGCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCACTTTCACCACTTGTGGCTaGATGGTACCTGATGTACTC +
Preference number: 4 (lower is better)
Translates to: VSLTAWAVSDAKSRAPATFTTCG*MVPDVL
Trigger: GAGTACATCAGGTACCATGCAGCCACAAGTGGTGAA...AGTGGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp TTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAATTTCCGAACCCTCTGTaGTTGAGTCCTGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: FLMQNPGRLPLAWLQCQQFPNPL*LSPGAA
Trigger: AGCGGCCCCAGGACTCAAGCACAGAGGGTTCGGAAA...TTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGTGAGTTTGAAGAGCTaGTCCTGTCCTTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKVSLKS*SCPSAW
Trigger: CCAGGCGGAAGGACAGGAGCAGCTCTTCAAACTCAC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTTACAATGCTGACTTaGACCCATGTGGTAATGGAG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLTMLT*THVVME
Trigger: CTCCATTACCACATGGGTGCAAGTCAGCATTGTAAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGCTCATACCAGGCCTTaGTCCCAGCAGGAATTTAAA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHAHTRP*SQQEFK
Trigger: TTTAAATTCCTGCTGGGAGCAAGGCCTGGTATGAGC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCAATACGGGGACTGTaGCGAGACCGCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSIRGL*RDRRGF
Trigger: GAAGCCCCTGCGGTCTCGGCACAGTCCCCGTATTGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACTTCGGAACTTCACCTaGCTCTCCTTTCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRLRNFT*LSFRSS
Trigger: GCTGGAACGAAAGGAGAGGCAGGTGAAGTTCCGAAG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTCCTTCCTCTCTGCATaGACGCGCGCGCGCGCACAC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSFLSA*TRARAH
Trigger: GTGTGCGCGCGCGCGCGTGCATGCAGAGAGGAAGGA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGGAGCTGCCATCTTGTaGAGTGCTGTATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVGAAIL*SAVSCC
Trigger: GCAGCAGGATACAGCACTGCACAAGATGGCAGCTCC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCCTTCTGGGGTCTGCTaGCCGTACCAGCCACCCCAT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSPSGVC*PYQPPH
Trigger: ATGGGGTGGCTGGTACGGGCAGCAGACCCCAGAAGG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGGGGCCATCTGGATCTaGAGCTGGGTAATGATCACT +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWGAIWI*SWVMIT
Trigger: AGTGATCATTACCCAGCTGCAGATCCAGATGGCCCC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATCTCTCCGTTGCTGCTaGTTGACTCGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGASLRCC*LTREVG
Trigger: CCCCACCTCCCGAGTCAAGCAGCAGCAACGGAGAGA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGTGTTTTCTCTCCGTTaGTGCTGCTTGACTCGGGAG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWVFSLR*CCLTRE
Trigger: CTCCCGAGTCAAGCAGCAGCAACGGAGAGAAAACAC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTTCCCGAGTCTTCCTTaGAGTTTCAAAGAGCGATAC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLFPSLP*SFKERY
Trigger: GTATCGCTCTTTGAAACTCCAAGGAAGACTCGGGAA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGCCAGACCCGGAAGGTaGGCAAAACATCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALARPGR*AKHPAS
Trigger: GGAAGCCGGATGTTTTGCCCACCTTCCGGGTCTGGC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGGGCTCATCCACTGTTaGAGAAGGAGGTGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVGLIHC*RRRWGQ
Trigger: TTGACCCCACCTCCTTCTCCAACAGTGGATGAGCCC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGGCAGCCTCATTGCGTaGTTGTCTGCAGTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALGSLIA*LSAVEP
Trigger: CGGCTCCACTGCAGACAACCACGCAATGAGGCTGCC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGGCAGCCTCATTGCGTaGTTGTCTGCAGTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAGSLIA*LSAVEP
Trigger: CGGCTCCACTGCAGACAACCACGCAATGAGGCTGCC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCGGGAATGGGTTCCCCTaGGCTCCTCCGTGCTTGTCG +
Preference number: 4 (lower is better)
Translates to: CRLSWKSFMLQLISEDPAGNGFP*APPCLS
Trigger: CGACAAGCACGGAGGAGCCCAGGGGAACCCATTCCC...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCATCGTGAACTGCCCCTaGGAATGGGTTCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGIVNCP*EWVPLG
Trigger: GCCCAGGGGAACCCATTCCCAGGGGCAGTTCACGAT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGCGGCCCTTGCTGCTTaGTGGAGGTACTGGGCACAA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALAALAA*WRYWAQ
Trigger: TTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGGCCAACAGACAGTGTaGGTTGCGGCCCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAGQQTV*VAALAA
Trigger: AGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATCCAGCAGGCAGACATaGTCTTCTGGACTACTGGAC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRSSRQT*SSGLLD
Trigger: GTCCAGTAGTCCAGAAGACCATGTCTGCCTGCTGGA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTCGTCATGCCAGGGCTaGTCTTCTGCCCAGCATAAC +
Preference number: 4 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGSSCQG*SSAQHN
Trigger: GTTATGCTGGGCAGAAGACCAGCCCTGGCATGACGA...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTAGCAAAGGGGACAAATaGCTGCCGGCGCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGSKGDK*LPALGG
Trigger: ACCCCCAAGCGCCGGCAGCCATTTGTCCCCTTTGCT...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGAAAGTGCACCCCGTGTaGTTCCTCAGAGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GTPHWNQEGWKCNLRDWLKVHPV*FLRAKG
Trigger: CCCCTTTGCTCTGAGGAACCACACGGGGTGCACTTT...CAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCAGCTCTGGTGGGTGTaGTGGTCAGGGTGGCAAACC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGQLWWV*WSGWQT
Trigger: GGTTTGCCACCCTGACCACCACACCCACCAGAGCTG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTGTTCCGTTCCCTTCTaGAACTACCCCTGGACTCCC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKCSVPF*NYPWTP
Trigger: GGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTTTGTCCACAGACACTaGGCTCACTTGCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKFVHRH*AHLLPA
Trigger: GGCTGGGAGCAAGTGAGCCCAGTGTCTGTGGACAAA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGGGCGGTTTCCTTGCTaGATGACTTTCAAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWGRFPC*MTFKAR
Trigger: CCGAGCTTTGAAAGTCATCCAGCAAGGAAACCGCCC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCAGCAATATCTAAGATaGCAGACCCCTCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWQQYLR*QTPRWS
Trigger: GCTCCACCGAGGGGTCTGCCATCTTAGATATTGCTG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGAAATTGTTGTTCAGGTaGAACTGGCCCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLKLLFR*NWPQKL
Trigger: GAGCTTTTGGGGCCAGTTCCACCTGAACAACAATTT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CAGGCCATGGATGCCGGCTACAAGGTGTTCACCACTTGTGGCTGCATGGTACCTCGGCTGCTTTTCCGGTaGCAGAAATCTGTTATCTGG +
Preference number: 4 (lower is better)
Translates to: QAMDAGYKVFTTCGCMVPRLLFR*QKSVIW
Trigger: CCAGATAACAGATTTCTGCCACCGGAAAAGCAGCCG...AGGTACCATGCAGCCACAAGTGGTGAACACCTTGTAGCCGGCATCCATGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGATGCTTGTAGATGTTaGTCAGTGCACTCTTACTGG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLDACRC*SVHSYW
Trigger: CCAGTAAGAGTGCACTGACCAACATCTACAAGCATC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGAAAGTAGTATCGAATTaGTGTTCCACCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQKVVSN*CSTLLS
Trigger: GCTGAGCAAGGTGGAACACCAATTCGATACTACTTT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGGGAGGGGCCGGGGATaGACACTCCACTGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFGRGRG*TLHCSC
Trigger: GCACGAGCAGTGGAGTGTCCATCCCCGGCCCCTCCC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGATTTCACATGGACCATaGGCTTCTGGTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKISHGP*ASGGRG
Trigger: GCCCCTCCCACCAGAAGCCCATGGTCCATGTGAAAT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCCTCTTTCCTCCTGGTaGGTCTGCGCTGTGTCGGGA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALPLSSW*VCAVSG
Trigger: TCCCGACACAGCGCAGACCCACCAGGAGGAAAGAGG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGGGCCTCTTTCCTCCTaGTGGGTCTGCGCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSGPLSS*WVCAVS
Trigger: CGACACAGCGCAGACCCACCAGGAGGAAAGAGGCCC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGGAGCAGCTCGCAGTTaGCCCTCCCATCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLGAARS*PSHLPP
Trigger: GGGTGGGAGATGGGAGGGCCAACTGCGAGCTGCTCC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGGGAGAGCTGAGAAGTaGAGCAGCTCGCAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFGRAEK*SSSQLA
Trigger: GGCCAACTGCGAGCTGCTCCACTTCTCAGCTCTCCC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGCTGGGTCAAGGGACTaGGTAGCTTTGGATATCTCC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWAGSRD*VALDIS
Trigger: GGAGATATCCAAAGCTACCCAGTCCCTTGACCCAGC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTACTTACAAACAAAGTaGCCCTGGAGCCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLYLQTK*PWSLQN
Trigger: GTTCTGAAGGCTCCAGGGCCACTTTGTTTGTAAGTA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCCAGGAAACCAGGACTaGAGATACTGCAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWPGNQD*RYCSIP
Trigger: TGGGATGCTGCAGTATCTCCAGTCCTGGTTTCCTGG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAACCACATTCCCTTCTaGGGTCTGCTGCCCGTACCA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVNHIPF*GLLPVP
Trigger: TGGTACGGGCAGCAGACCCCAGAAGGGAATGTGGTT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGATCTGGATCTGCAGCTaGGTAATGATCACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLIWICS*VMITSV
Trigger: GACAGAAGTGATCATTACCCAGCTGCAGATCCAGAT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
3UTR CAA 72 bp GTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTaGGTTACAGTGCCAACAAGCCCTTTTCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VSDAKSRAPATG*VTVPTSPFPRP
Trigger: TGGCCTTGGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGAATGCAGGGCAATCTaGATAGATAAAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHECRAI*IDKVWG
Trigger: TCCCCAGACTTTATCTATTCAGATTGCCCTGCATTC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGACTGAGGGGCAAGACTaGGAAAGGTATTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLTEGQD*ERYSFC
Trigger: ACAAAAAGAATACCTTTCTCAGTCTTGCCCCTCAGT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAACTCTCCATGGCATGTaGGGTCACTTAGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRTLHGM*GHLETD
Trigger: GTCTGTCTCTAAGTGACCTCACATGCCATGGAGAGT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGAACAGCGCTGGGCTTaGTCTCTCACCGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFEQRWA*SLTVCP
Trigger: GGGGCAGACGGTGAGAGATCAAGCCCAGCGCTGTTC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCAGAGAGCAGTGGACTaGGGAGAGATTGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKQRAVD*GEIAMD
Trigger: ATCCATGGCAATCTCTCCTCAGTCCACTGCTCTCTG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCGTCTTGTCCCTTCTCTaGTTTCCTCTCCAACGCGAG +
Preference number: 4 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGVLSLL*FPLQRE
Trigger: CTCGCGTTGGAGAGGAAATCAGAGAAGGGACAAGAC...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAAATGGCTCCCAGCCTaGAAGAGCACGGTTATAATA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHKWLPA*KSTVII
Trigger: TATTATAACCGTGCTCTTTCAGGCTGGGAGCCATTT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCCGCACTGGTGGGAGTaGAGAGAAATAAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: VARWVRPRHNPMKSWASLPHWWE*REINLG
Trigger: CCCCAGGTTTATTTCTCTTCACTCCCACCAGTGCGG...AAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp GGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGGTAGCCGCCAAGAAGTaGGGTGTAAAGGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: GTPHWNQEGWKCNLRDWLVAAKK*GVKAQQ
Trigger: TTGCTGTGCCTTTACACCTCACTTCTTGGCGGCTAC...CAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGACTACATTGGTCCAATaGATGGGAGCCTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLTTLVQ*MGALQK
Trigger: TTTCTGTAAGGCTCCCATTCATTGGACCAATGTAGT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGGGTTCCAGGTGGAATaGGCAATTCTTTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWGFQVE*AILYRG
Trigger: CCCTCTGTAAAGAATTGCTCATTCCACCTGGAACCC...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTCCAGGGAGAAGCCCTaGCACCAGCCCGGCATGCCT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFSREKP*HQPGMP
Trigger: AGGCATGCCGGGCTGGTGTCAGGGCTTCTCCCTGGA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGGTTTCCTTGCTGGATaGCTTTCAAAGCTCGGACAC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRGFLAG*LSKLGH
Trigger: GTGTCCGAGCTTTGAAAGTCATCCAGCAAGGAAACC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGCATTCATGTTGCAGTTaGTCTCAGAGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVHSCCS*SQRTLP
Trigger: GGGCAGGGTCCTCTGAGATCAACTGCAACATGAATG...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCCATTCATGTTGCAGTTaGTCTCAGAGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGHSCCS*SQRTLP
Trigger: GGGCAGGGTCCTCTGAGATCAACTGCAACATGAATG...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAACTGGGCCGGTCTCGATaGCCTCATTCTCATTGCTCA +
Preference number: 4 (lower is better)
Translates to: FLMQNPGRLPLAWLQCQQLGRSR*PHSHCS
Trigger: TGAGCAATGAGAATGAGGTCATCGAGACCGGCCCAG...TTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGCCAAGAAAATCCACTaGTCCCAGGATTCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVAKKIH*SQDSSC
Trigger: GCAGCTCGAATCCTGGGATCAGTGGATTTTCTTGGC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCAAGGCCAGATATGAAACCGCTGACACCCCCTTCTGTTTTCACACCTTCCACTTACTCCCGCTCTGACTaGTGCCGATTGTCCATCGTC +
Preference number: 4 (lower is better)
Translates to: PRPDMKPLTPPSVFTPSTYSRSD*CRLSIV
Trigger: GACGATGGACAATCGGCATCAGTCAGAGCGGGAGTA...AGTGGAAGGTGTGAAAACAGAAGGGGGTGTCAGCGGTTTCATATCTGGCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGATGTACTCCCGCTCTaGCTGATGCCGATTGTCCAT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKDVLPL*LMPIVH
Trigger: ATGGACAATCGGCATCAGTCAGAGCGGGAGTACATC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCCAACAAGCCCTTTTCCAAGGCCAGATATGAAACCGCTGACACCCCCTTCTGTCAGCTTTGGAGGAGATaGGCACGCAGTAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: ANKPFSKARYETADTPFCQLWRR*ARSSCQ
Trigger: TTGACAGCTACTGCGTGCTCATCTCCTCCAAAGCTG...ACAGAAGGGGGTGTCAGCGGTTTCATATCTGGCCTTGGAAAAGGGCTTGTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACTTTCCCTCATTCCTTaGCAACTTCCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRLSLIP*QLPQTR
Trigger: TCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTCTCCTAGATCCTTCTaGAGGGCCAGCGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSPRSF*RASASP
Trigger: AGGACTGGCGCTGGCCCTTCAGAAGGATCTAGGAGA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGATGGGAGGGATTGGTaGCACCATCTTCAAAGCGTA +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWDGRDW*HHLQSV
Trigger: TACGCTTTGAAGATGGTGTCACCAATCCCTCCCATC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATGCCGGTATTGCAGCTaGGAGAGTTTCAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRCRYCS*ESFKGM
Trigger: CATTCCCTTGAAACTCTCTCAGCTGCAATACCGGCA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTTAGGCATTGCTGGCTaGATATCAGTTTACAAAGAG +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQLGIAG*ISVYKE
Trigger: CTCTTTGTAAACTGATATTCAGCCAGCAATGCCTAA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCAAGGCCTTCCAACATaGCTATATCCTCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHQGLPT*LYPQEK
Trigger: CTTTTCCTGAGGATATAGTCATGTTGGAAGGCCTTG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTGATAACCAAAACCTaGGGTATGAACCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLITKT*GMNLSL
Trigger: AAGGGAAAGGTTCATACCTCAGGTTTTGGTTATCAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGGTCTCTTCAGATGCTaGCCCATCCCTACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWGLFRC*PIPTFP
Trigger: AGGAAAAGTAGGGATGGGTCAGCATCTGAAGAGACC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGGCCTCTTCACAAAGTaGGCATTGGTACCAAACACC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRGLFTK*ALVPNT
Trigger: GGTGTTTGGTACCAATGCTCACTTTGTGAAGAGGCC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGACCTCGGCCTTTCTTaGCATCAATACAGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWDLGLS*HQYRFG
Trigger: GCCAAACCTGTATTGATGTCAAGAAAGGCCGAGGTC...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp AATGATACCATGAGCCAGGCCATGGATGCCGGCTACAAGGTGTTCACCACTTGTAGCTCTGGCACTGTGTaGCCTTGGCAGCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: NDTMSQAMDAGYKVFTTCSSGTV*PWQQSL
Trigger: CAAACTCTGCTGCCAAGGTCACACAGTGCCAGAGCT...ACAAGTGGTGAACACCTTGTAGCCGGCATCCATGGCCTGGCTCATGGTATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGCTTCAGTGAGGGCTaGATCTTCCATTCTGACAAA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSFSEG*IFHSDK
Trigger: TTTGTCAGAATGGAAGATGCAGCCCTCACTGAAGCT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTACCTGCCAACTGGGTaGAATTCAAAGAATACAGTT +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQYLPTG*NSKNTV
Trigger: AACTGTATTCTTTGAATTGCACCCAGTTGGCAGGTA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTCCAACTTCACGTTGTaGAGAATGCCCTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSNFTL*RMPSGG
Trigger: GCCTCCTGAGGGCATTCTGCACAACGTGAAGTTGGA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGGAGACAGACTCCCAATaGTGCCCTGTAAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RHNPMKSWASLQSGAWVQETDSQ*CPVRPG
Trigger: ACCTGGCCTTACAGGGCAGCATTGGGAGTCTGTCTC...CTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGTCTGGAAGATGAGTaGTTCTTCACCACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSLEDE*FFTTGS
Trigger: ACTACCAGTGGTGAAGAAGCACTCATCTTCCAGACT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCCCTGGGCTCCTCCGTaGTTGTCGTTTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALPWAPP*LSFSSD
Trigger: GTCTGAGGAAAACGACAAGCACGGAGGAGCCCAGGG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCACAGACAGTGTGGGTTaGGGCCCTTGCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGTDSVG*GPCCLV
Trigger: CACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGACTACTATCCTCTGGTaGCTTCGAGTATTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRTTILW*LRVFSR
Trigger: CCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGT...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGAAACAACCAACTTGCTaGCTTTTTCAATTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQKQPTC*LFQLAL
Trigger: CAAGGCCAATTGAAAAAGGCAGCAAGTTGGTTGTTT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGATGGAGACGACTAGCTaGCTGCTGTTGCCAGGATAC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVMETTS*LLLPGY
Trigger: GTATCCTGGCAACAGCAGGCAGCTAGTCGTCTCCAT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGGACACTGGGCTCACTTaGTCCCAGCCATTTACTCTC +
Preference number: 4 (lower is better)
Translates to: HTGTRKGGNVTFGIGCSLDTGLT*SQPFTL
Trigger: GAGAGTAAATGGCTGGGAGCAAGTGAGCCCAGTGTC...CAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGAGAGCTGCCTCCTTaGCAGGTTTCAGCGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGELPP*QVSASH
Trigger: ATGGGACGCTGAAACCTGGCAAGGAGGCAGCTCTCC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACCTGGGCGGTTTCCTTaGTGGATGACTTTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRPGRFP*WMTFKA
Trigger: AGCTTTGAAAGTCATCCAGCAAGGAAACCGCCCAGG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTCCACGTCTGAGTTGTaGTTCGCCTGCGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFSTSEL*FACGQA
Trigger: AGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCTTCATATGAACGGCTaGTTTTCCGGTGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLHMNG*FSGGRN
Trigger: ATTTCTGCCACCGGAAAAGCAGCCGTTCATATGAAG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACATTGGTGTTCCACCTTaGTCAGCTGTCTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHIGVPP*SAVFSW
Trigger: CCATGAAAAGACAGCTGAGCAAGGTGGAACACCAAT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAAAATCCAGGGCGCCTaGCACTGGCTTGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKKIQGA*HWLGYS
Trigger: ACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTTTCCGAACCCTCTGTaGTTGAGTCCTGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGFPNPL*LSPGAA
Trigger: AGCGGCCCCAGGACTCAAGCACAGAGGGTTCGGAAA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATTTCCGAACCCTCTGTaGTTGAGTCCTGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAFPNPL*LSPGAA
Trigger: AGCGGCCCCAGGACTCAAGCACAGAGGGTTCGGAAA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGCTTTCTTGGTCACCTaGACATACACCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWAFLVT*TYTFPW
Trigger: CCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGACACTCCACTGCTCGTaGTCACGGCTTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVTLHCS*SRLSWS
Trigger: TGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCACCCGACTCCGGTTCTaGCTCCATCGTCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGTRLRF*LHRQLR
Trigger: TCTCAGCTGACGATGGAGGCAGAACCGGAGTCGGGT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCTTACAATGCTGACTTaGACCCATGTGGTAATGGAG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLTMLT*THVVME
Trigger: CTCCATTACCACATGGGTGCAAGTCAGCATTGTAAG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGCTGTGGAGCTACGATaGCTGCCTGTGGCTTTATTA +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWAVELR*LPVALL
Trigger: TAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTCCCTTCTCCCTATCTaGTTAATCCTTACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQSLLPI*LILTEK
Trigger: CTTTTCTGTAAGGATTAAGCAGATAGGGAGAAGGGA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGCCAAGTTTCCATTCTaGAATCCACTAACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLAKFPF*NPLTWS
Trigger: ACTCCAAGTTAGTGGATTGCAGAATGGAAACTTGGC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAACACCCAGCACTGCTaGGGCCCAAAGCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVNTQHC*GPKQIF
Trigger: GAAAATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGTGCAAATGTCAAAGTaGTTGGTTGTGCAATCACAG +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLVQMSK*LVVQSQ
Trigger: CTGTGATTGCACAACCAAGCACTTTGACATTTGCAC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCGGGTCGGCCAACTGTaGTGGGTCAAGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLRVGQL*WVKGLG
Trigger: ACCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGAGCCTTCAGAACATTaGGATGAGCACCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKEPSEH*DEHPPS
Trigger: GCTTGGTGGGTGCTCATCGCAATGTTCTGAAGGCTC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATCTTCAGGAATCCACTaGTCCTGTTGCTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRSSGIH*SCCSAD
Trigger: GTCAGCAGAGCAACAGGAGCAGTGGATTCCTGAAGA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAAGAACCTCGCGGGTATaGTGCTCCAACAACACAATG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRRTSRV*CSNNTM
Trigger: CATTGTGTTGTTGGAGCAGCATACCCGCGAGGTTCT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCAGGAGACTGGGCCCTaGTATCCCGAAGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLQETGP*YPEGFP
Trigger: CGGGAAGCCTTCGGGATAGCAGGGCCCAGTCTCCTG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTCTCTACCTGCCAACTaGGTGCAATTCAAAGAATAC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLSLPAN*VQFKEY
Trigger: GTATTCTTTGAATTGCACCCAGTTGGCAGGTAGAGA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTTAGAAAGGCTGGAGTaGCTGAACAATCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLERLE*LNNPFS
Trigger: GGAGAATGGATTGTTCAGCCACTCCAGCCTTTCTAA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGGAGCTTCTTCCATGTaGGAAGGGAGAGACCGAGGC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFGASSM*EGRDRG
Trigger: GCCTCGGTCTCTCCCTTCCCACATGGAAGAAGCTCC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGACTGGAAGAGAATTCTaGATGTTTCTTATCTACCAA +
Preference number: 4 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGTGREF*MFLIYQ
Trigger: TTGGTAGATAAGAAACATCCAGAATTCTCTTCCAGT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGGAAGTCCAGACTCCATaGAGGCATGTGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: GTPHWNQEGWKCNLRDWLEVQTP*RHVAPT
Trigger: AGTTGGAGCCACATGCCTCCATGGAGTCTGGACTTC...CAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCGCCCTTGCTGCTTGGTaGAGGTACTGGGCACAAACT +
Preference number: 4 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFALAAW*RYWAQT
Trigger: AGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGC...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGGGACTACTGGACTCTTaGCCAACAGACAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HTGTRKGGNVTFGIGCSLGLLDS*PTDSVG
Trigger: ACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCC...CAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGTAGTTCAATCTGAATaGACCCTTGGGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRVVQSE*TLGWCC
Trigger: GCAGCACCACCCAAGGGTCCATTCAGATTGAACTAC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGCATTAGCTTGCTCTaGGATGGATTTTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSISLL*DGFCNG
Trigger: GCCATTGCAAAATCCATCCCAGAGCAAGCTAATGCT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAACGCGAGATGCACCTaGAAGGTAAGTGCCAACGGA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKNARCT*KVSANG
Trigger: TCCGTTGGCACTTACCTTCCAGGTGCATCTCGCGTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTAACGCGAGATGCACCTaGAAGGTAAGTGCCAACGGA +
Preference number: 4 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVNARCT*KVSANG
Trigger: TCCGTTGGCACTTACCTTCCAGGTGCATCTCGCGTT...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCGCTGCCACAGCCCCTaGGCTATCTCGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFRCHSP*AISAGG
Trigger: TCCACCAGCCGAGATAGCCCAGGGGCTGTGGCAGCG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCACGCCAGAGATCAATaGCGCTGCCACAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLHARDQ*RCHSPW
Trigger: CCAGGGGCTGTGGCAGCGCCATTGATCTCTGGCGTG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTTTCAGTCGAGGAGGATaGAGACGACTAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: VARWVRPRHNPMKSWASLFSRGG*RRLAAC
Trigger: GCAGGCAGCTAGTCGTCTCCATCCTCCTCGACTGAA...AAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAAACGAGGTTTGGCCTTaGCTTCTAGCTTCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRNEVWP*LLASVE
Trigger: CTCGACTGAAGCTAGAAGCCAAGGCCAAACCTCGTT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAGCAAAGGGGACAAATaGCTGCCGGCGCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSKGDK*LPALGG
Trigger: ACCCCCAAGCGCCGGCAGCCATTTGTCCCCTTTGCT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCAGCTCTGGTGGGTGTaGTGGTCAGGGTGGCAAACC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSQLWWV*WSGWQT
Trigger: GGTTTGCCACCCTGACCACCACACCCACCAGAGCTG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGAGAGAGTGCAGCTCTaGTGGGTGTGGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSERVQL*WVWWSG
Trigger: CCCTGACCACCACACCCACCAGAGCTGCACTCTCTC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGAGCAAACGAATCCCCTaGCATGATAGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWSKRIP*HDSRKH
Trigger: GTGCTTCCTGCTATCATGCCAGGGGATTCGTTTGCT...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCTGTGTCCATAGAGTaGCACTCTCGTTTACTGCTA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSVSIE*HSRLLL
Trigger: TAGCAGTAAACGAGAGTGCCACTCTATGGACACAGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGTTTTGGGTTCCAGGTaGAATGAGCAATTCTTTACA +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQVLGSR*NEQFFT
Trigger: TGTAAAGAATTGCTCATTCCACCTGGAACCCAAAAC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTCATTCCGAGGCCAGTaGAACACCACACTGGAACCA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSFRGQ*NTTLEP
Trigger: TGGTTCCAGTGTGGTGTTCCACTGGCCTCGGAATGA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAATCCAATGAAGTCATaGGCTTCACTTCAGTCCGGA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHNPMKS*ASLQSG
Trigger: TCCGGACTGAAGTGAAGCCCATGACTTCATTGGATT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTGGCAGACCCCTCGGTaGAGCGGGCGGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSWQTPR*SGRLRA
Trigger: AGCCCTCAGCCGCCCGCTCCACCGAGGGGTCTGCCA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACTGGAGTGCTCTAGTTaGTCCATCTGGGATGACTCT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRLECSS*SIWDDS
Trigger: AGAGTCATCCCAGATGGACCAACTAGAGCACTCCAG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCGGCTGCTTTTCCGGTaGCAGAAATCTGTTATCTGG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWRLLFR*QKSVIW
Trigger: CCAGATAACAGATTTCTGCCACCGGAAAAGCAGCCG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGTTGACTTGCACAGCTaGGCCGGTCTCGATGACCTC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALVDLHS*AGLDDL
Trigger: GAGGTCATCGAGACCGGCCCAGCTGTGCAAGTCAAC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCTGTGTCTCTCACCGCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCAAAGTAGTATCGAATTaGTGTTCCACCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: AVSLTAWAVSDAKSRAPAKVVSN*CSTLLS
Trigger: GCTGAGCAAGGTGGAACACCAATTCGATACTACTTT...GGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAGACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTGAGGAGTTCCTCCTaGAAATGTTTGAGGATATCA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLRSSS*KCLRIS
Trigger: TGATATCCTCAAACATTTCCAGGAGGAACTCCTCAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGGATTCGAGCTGCCTaGCTGAGGAGTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALRIRAA*LRSSSW
Trigger: CCAGGAGGAACTCCTCAGCCAGGCAGCTCGAATCCT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTACCATGGGCTTCTGGTaGGAGGGGCCGGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFTMGFW*EGPGMD
Trigger: GTCCATCCCCGGCCCCTCCCACCAGAAGCCCATGGT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGGGCCTCTTTCCTCCTaGTGGGTCTGCGCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFGPLSS*WVCAVS
Trigger: CGACACAGCGCAGACCCACCAGGAGGAAAGAGGCCC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATCGTCAGCTGAGAGCTaGGCCTCTTTCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGASSAES*ASFLLV
Trigger: CACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCCGGGGCTTTGTTCTTaGTTGTTGCTGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFPGLCS*LLLPRQ
Trigger: CTGCCTGGGCAGCAACAACCAAGAACAAAGCCCCGG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGACTCCCCTTTCTGCTaGCGGTCATTCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRDSPFC*RSFFHF
Trigger: GAAATGGAAGAATGACCGCCAGCAGAAAGGGGAGTC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGTCGGCCAACTGTGCTaGGTCAAGGGACTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSVGQLC*VKGLGS
Trigger: GCTACCCAGTCCCTTGACCCAGCACAGTTGGCCGAC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCAAACAAAGTGGCCCTaGAGCCTTCAGAACATTGCG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWQTKWP*SLQNIA
Trigger: CGCAATGTTCTGAAGGCTCCAGGGCCACTTTGTTTG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCACTCTCACATGGCTTaGCACCTTGCTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALHSHMA*HLAWAW
Trigger: CCAGGCCCAAGCAAGGTGCCAAGCCATGTGAGAGTG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAGTGAAGGCTGGAGATaGAGATCACCCAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSEGWR*RSPKGP
Trigger: TGGACCCTTGGGTGATCTCCATCTCCAGCCTTCACT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCCCACGTCAATATCCTaGACATGCTTCCAATTGTCT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHPTSIS*TCFQLS
Trigger: AGACAATTGGAAGCATGTCCAGGATATTGACGTGGG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAAAGGCTGGAGTGGCTaGACAATCCATTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKKGWSG*TIHSPS
Trigger: GGAAGGAGAATGGATTGTTCAGCCACTCCAGCCTTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCCCAGGTTTGCAGTGTaGTCAGCACATCCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKPRFAV*SAHPSN
Trigger: ATTGCTTGGATGTGCTGATCACACTGCAAACCTGGG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCCCCAGGTTTGCAGTGTaGTCAGCACATCCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGPRFAV*SAHPSN
Trigger: ATTGCTTGGATGTGCTGATCACACTGCAAACCTGGG...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGAAAGTGAATGAACCTTaGGATCCAGTTTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLKVNEP*DPVWCS
Trigger: TGAACACCAAACTGGATCTCAAGGTTCATTCACTTT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACAGAACAGCGCTGGGCTTaGTCTCTCACCGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTEQRWA*SLTVCP
Trigger: GGGGCAGACGGTGAGAGATCAAGCCCAGCGCTGTTC...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCAGCAAGAGGCATCGTaGACTGCCCCTGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLQQEAS*TAPGNG
Trigger: CCCATTCCCAGGGGCAGTTCACGATGCCTCTTGCTG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCACTCAGGACAGTATaGATTCTTGGATCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLPLRTV*ILGSCK
Trigger: TTTACAAGATCCAAGAATTCATACTGTCCTGAGTGG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGTAGCCAGTCAAATATaGGAAACACACGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHVASQI*ETHGDC
Trigger: ACAATCTCCGTGTGTTTCTCATATTTGACTGGCTAC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGAGGACACATCTTCAATaGCCACAAACTCCGTACCTG +
Preference number: 4 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWRTHLQ*PQTPYL
Trigger: CAGGTACGGAGTTTGTGGTCATTGAAGATGTGTCCT...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCACCGGGGCTTATAGGTaGGCACTGTGGTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGTGAYR*ALWCLS
Trigger: TGAAAGGCACCACAGTGCTCACCTATAAGCCCCGGT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTACCGGGGCTTATAGGTaGGCACTGTGGTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGTGAYR*ALWCLS
Trigger: TGAAAGGCACCACAGTGCTCACCTATAAGCCCCGGT...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGTACGGGATCCACAATTaGAAGAGCTGTATCATGCTC +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRYGIHN*KSCIML
Trigger: GAGCATGATACAGCTCTTTCAATTGTGGATCCCGTA...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCATTATAGGAGAGTCTaGTATCCAGGGCTTGTAACT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHHYRRV*YPGLVT
Trigger: AGTTACAAGCCCTGGATATCAGACTCTCCTATAATG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTGACAATCATCCATGCTaGATCCCAGCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGDNHPC*IPAPAA
Trigger: GGCTGCAGGAGCTGGGATTCAGCATGGATGATTGTC...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGACACACTCTCAGCTTTaGTCTCCACGCCAGAGATCA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVTHSQL*SPRQRS
Trigger: TGATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCCATGCAGTCATCGATaGAACAGATGCACACACTCT +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWPCSHR*NRCTHS
Trigger: AGAGTGTGTGCATCTGTTTCATCGATGACTGCATGG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGCCATGCAGTCATCGATaGAACAGATGCACACACTCT +
Preference number: 4 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWPCSHR*NRCTHS
Trigger: AGAGTGTGTGCATCTGTTTCATCGATGACTGCATGG...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp GGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTCAGACGGGAAAAGGTaGGTTCAGCGAGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: GTPHWNQEGWKCNLRDWLSDGKR*VQREEH
Trigger: ATGTTCCTCTCGCTGAACTCACCTTTTCCCGTCTGA...CAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAATCTCCAGAAAGGGTaGAGTGGGCATAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVNLQKG*SGHSLQ
Trigger: CTGAAGGCTATGCCCACTTCACCCTTTCTGGAGATT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCCGCACTGGTGGGAGTaGAGAGAAATAAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGPHWWE*REINLG
Trigger: CCCCAGGTTTATTTCTCTTCACTCCCACCAGTGCGG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCCGCACTGGTGGGAGTaGAGAGAAATAAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALPHWWE*REINLG
Trigger: CCCCAGGTTTATTTCTCTTCACTCCCACCAGTGCGG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGGGGAAATTCTCCAGTaGTACCCCCAGCTCAATGTT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKGEILQ*YPQLNV
Trigger: AACATTGAGCTGGGGGTATCACTGGAGAATTTCCCC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGGCATGCCTTCTGGATaGATCCCCCTTCCGATTCTC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALGMPSG*IPLPIL
Trigger: GAGAATCGGAAGGGGGATTCATCCAGAAGGCATGCC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCAGCTACGCCATGCTaGGTAAAGACAACCGGGACC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSATPC*VKTTGT
Trigger: GGTCCCGGTTGTCTTTACTCAGCATGGCGTAGCTGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTGACAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGTGGGAGGGGTTCATCCACTTCATATaGACGGCTGCTTTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: LTARTSDFTWTMGFWWEGFIHFI*TAAFPV
Trigger: CACCGGAAAAGCAGCCGTTCATATGAAGTGGATGAA...CCCCTCCCACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGTGGTACCAATGAGCTaGTTGTCCACCTGTACATCC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKVVPMS*LSTCTS
Trigger: GGATGTACAGGTGGACAATCAGCTCATTGGTACCAC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTGGGCCGGTCTCGATaGCCTCATTCTCATTGCTCA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGLGRSR*PHSHCS
Trigger: TGAGCAATGAGAATGAGGTCATCGAGACCGGCCCAG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGGAACTTCACTGCGTTaGCTTGCACAGCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLGTSLR*LAQLGR
Trigger: CCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCGATGAAGAATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTGCTCCTGTGGAACTTCACTGCGTTaGCTTGCACAGCTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AMKNSSCMLSVSLKSCSCGTSLR*LAQLGR
Trigger: CCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCC...ACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTCTTCATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTTCGAGCTGCCTGGCTaGGGAGTTCCTCCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGFELPG*GVPPGN
Trigger: ATTTCCAGGAGGAACTCCTCAGCCAGGCAGCTCGAA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTACTCCCGCTCTGACTaGTGCCGATTGTCCATCGTC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFYSRSD*CRLSIV
Trigger: GACGATGGACAATCGGCATCAGTCAGAGCGGGAGTA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTACTCCCGCTCTGACTaGTGCCGATTGTCCATCGTC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGYSRSD*CRLSIV
Trigger: GACGATGGACAATCGGCATCAGTCAGAGCGGGAGTA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTGGCTGCATGGTACCTaGTGTACTCCCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGWLHGT*CTPALT
Trigger: AGTCAGAGCGGGAGTACATCAGGTACCATGCAGCCA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCCACCAATGATACCATaGGCCAGGCCATGGATGCCG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSPPMIP*ARPWMP
Trigger: CGGCATCCATGGCCTGGCTCATGGTATCATTGGTGG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTCGCCTGGGCTGTTTCTaGTGCAAAATCCAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFRLGCF*CKIQGA
Trigger: GGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCG...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCTCACCGCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTAGAGGTCATCGTATTTaGCTTCTAGGAAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: LSPPGLFLMQNPGRLPLARGHRI*LLGKWL
Trigger: AAGCCATTTTCCTAGAAGTCAAATACGATGACCTCT...AGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTTTCTTGTGACAACTTaGCAGCAAGGACCTCAGATT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHFLVTT*QQGPQI
Trigger: AATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCTTTCCCTCATTCCTTaGCAACTTCCCCAAACCCGA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKLSLIP*QLPQTR
Trigger: TCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGCAGTGCGTGAGTGCTaGGACAATCATCACCACCCC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSAVREC*DNHHHP
Trigger: GGGGTGGTGATGATTGTCTCAGCACTCACGCACTGC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTCTCTGGATTCCTCCTaGAGCACCAGCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFSLDSS*STSPQG
Trigger: GCCCTGTGGGCTGGTGCTTCAGGAGGAATCCAGAGA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTGGCTCACCCTTCAGTaGGCACAGAGAAGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSWLTLQ*AQRSSD
Trigger: GTCGCTGCTTCTCTGTGCTCACTGAAGGGTGAGCCA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTTTGAGAAGTGCAACTaGGAGCTGGTCAGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWFEKCN*ELVSVQ
Trigger: CTGAACACTGACCAGCTCTCAGTTGCACTTCTCAAA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTCCTGTAACTCCATCTaGGGCAAATCCCCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWSCNSI*GKSPSK
Trigger: TTTACTGGGGGATTTGCCTCAGATGGAGTTACAGGA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTCATTAAATGTGCTTaGAGCTGTTCTTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLIKCA*SCSSLN
Trigger: GTTCAGTGAAGAACAGCTTCAAGCACATTTAATGAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTACCTGCCAACTGGGTaGAATTCAAAGAATACAGTT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLYLPTG*NSKNTV
Trigger: AACTGTATTCTTTGAATTGCACCCAGTTGGCAGGTA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTCTTGGACTTCCTTTTaGTTTTTCCGGGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWSWTSF*FFRDAE
Trigger: CTCTGCGTCCCGGAAAAAGCAAAAGGAAGTCCAAGA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTGAAGGCCACCACCTCTaGCTGGAAACGCTGAGTATG +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGEGHHL*LETLSM
Trigger: CATACTCAGCGTTTCCAGGCAGAGGTGGTGGCCTTC...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGTGGGTTGCGGCCCTTaGTGCTTGGTGGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLVGCGP*CLVEVL
Trigger: CAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCAC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCTCTCCAACGCGAGATaGACCTGGAAGGTAAGTGCC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFLSNAR*TWKVSA
Trigger: GGCACTTACCTTCCAGGTGCATCTCGCGTTGGAGAG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACTCTCCAACGCGAGATaGACCTGGAAGGTAAGTGCC +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGALSNAR*TWKVSA
Trigger: GGCACTTACCTTCCAGGTGCATCTCGCGTTGGAGAG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTCTGAATCCCAGCTCCTaGAGCCTAGCCAGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGLNPSS*SLASCN
Trigger: GTTACAGCTGGCTAGGCTGCAGGAGCTGGGATTCAG...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCCCACTGTGAGAGAGTaGAGCTCTGGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSPTVRE*SSGGCG
Trigger: ACCACACCCACCAGAGCTGCACTCTCTCACAGTGGG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAAGTGATGACTTTCCGTaGACTGCCTTCCATAGTCAC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRSDDFP*TAFHSH
Trigger: GTGACTATGGAAGGCAGTGCACGGAAAGTCATCACT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGAGCTGTATGGAGAGCTaGCTCCTTGCCAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RHNPMKSWASLQSGAWVQSCMES*LLARFQ
Trigger: CTGAAACCTGGCAAGGAGGCAGCTCTCCATACAGCT...CTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACTGCCTGTTCCCTCCTaGAAGCCAGAGAATGTATAT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRLPVPS*KPENVY
Trigger: ATATACATTCTCTGGCTTGCAGGAGGGAACAGGCAG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCTCACCGCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTAGCACTTCCAATTCCTaGTCTGTATCTGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: LSPPGLFLMQNPGRLPLASTSNS*SVSGFF
Trigger: AAAGAATCCAGATACAGAGCAGGAATTGGAAGTGCT...AGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTCCCAGGATTCGAGCTaGCTGGCTGAGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSQDSS*LAEEFL
Trigger: GAGGAACTCCTCAGCCAGGCAGCTCGAATCCTGGGA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GACACCCCCTTCTGTTTTCACACCTTCCACTGTCGAAGTTATAACACTGGTCAGGAGCCAGGCCATGGATaGCGGCTACAAGGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: DTPFCFHTFHCRSYNTGQEPGHG*RLQGVH
Trigger: GTGAACACCTTGTAGCCGGCATCCATGGCCTGGCTC...CTGACCAGTGTTATAACTTCGACAGTGGAAGGTGTGAAAACAGAAGGGGGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACTGGCTTGGTTACAGTaGCAACAAGCCCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRLAWLQ*QQALFQ
Trigger: TTGGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGCTTTCTTGGTCACCTaGACATACACCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVAFLVT*TYTFPW
Trigger: CCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGAGTCCAGCTCCAGCTaGTCTCGGTTTTCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAESSSS*SRFSLS
Trigger: ACTCAGCGAAAACCGAGAGCAGCTGGAGCTGGACTC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GGAGGAGATGAGCACGCAGTAGCTGTCAATGTTCTCCACAGCGATGAAGAATTCGAGTCCAGCTCCAGCTaGTCTCGGTTTTCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GGDEHAVAVNVLHSDEEFESSSS*SRFSLS
Trigger: ACTCAGCGAAAACCGAGAGCAGCTGGAGCTGGACTC...GAATTCTTCATCGCTGTGGAGAACATTGACAGCTACTGCGTGCTCATCTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGCTCATACCAGGCCTTaGTCCCAGCAGGAATTTAAA +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWAHTRP*SQQEFK
Trigger: TTTAAATTCCTGCTGGGAGCAAGGCCTGGTATGAGC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGGCTGCGACTCTCCATaGTCCTGGCCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFGCDSP*SWPWPP
Trigger: AGGAGGCCATGGCCAGGAGCATGGAGAGTCGCAGCC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCCTTCCTTCCTCTCTaGATGCACGCGCGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPFLPL*MHARAR
Trigger: GCGCGCGCGCGCGTGCATGCAGAGAGGAAGGAAGGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTGCCATCTTGTGCAGTaGGTGAGTGCTGAGACAATC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVCHLVQ*VSAETI
Trigger: GATTGTCTCAGCACTCACGCACTGCACAAGATGGCA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCTGCTCCCGGGTCTCTaGAACTTTCTACTAAGTATC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWLLPGL*NFLLSI
Trigger: GATACTTAGTAGAAAGTTGCAGAGACCCGGGAGCAG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAAATGTACCGGCCATTaGTCTCAACACCAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWKCTGH*SQHQAA
Trigger: TGCAGCTTGGTGTTGAGAGCAATGGCCGGTACATTT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCTTCCAGTTCATCCATaGATAACGTCAACTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLPVHP*ITSTPS
Trigger: TGAAGGAGTTGACGTTATCCATGGATGAACTGGAAG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGATAAAGTCTGGGGATaGTCTTTACTGAATTCCACC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHDKVWG*SLLNST
Trigger: GGTGGAATTCAGTAAAGACCATCCCCAGACTTTATC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTGTTGGAGAAGGAGGTaGGGTCAAGGGATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKCWRRR*GQGIVL
Trigger: AAGGACTATCCCTTGACCCCACCTCCTTCTCCAACA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGGCTCATCCACTGTTaGAGAAGGAGGTGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGLIHC*RRRWGQ
Trigger: TTGACCCCACCTCCTTCTCCAACAGTGGATGAGCCC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTCAATAGCAGCTCGCTaGCGCCCTAAGACATCCTGC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSIAAR*RPKTSC
Trigger: GCAGGATGTCTTAGGGCGCCAGCGAGCTGCTATTGA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGCCCTTGCTGCTTGGTaGAGGTACTGGGCACAAACT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALALAAW*RYWAQT
Trigger: AGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGCGGCCCTTGCTGCTTaGTGGAGGTACTGGGCACAA +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFAALAA*WRYWAQ
Trigger: TTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACACAGGCCAACAGACAGTGTaGGTTGCGGCCCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: DFKASRPNTIGNVHQSDTGQQTV*VAALAA
Trigger: AGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCC...TGTGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCGCAGACATGGTCTTCTaGACTACTGGACTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFADMVF*TTGLLA
Trigger: GGCCAAGAGTCCAGTAGTCCAGAAGACCATGTCTGC...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAAGATGTCCATGTCCTaGAGATCCACGACAACGCAA +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWKMSMS*RSTTTQ
Trigger: TTGCGTTGTCGTGGATCTCCAGGACATGGACATCTT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGTCCACTACTATCCTCTaGTGCCTTCGAGTATTCTCT +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRSTTIL*CLRVFS
Trigger: AGAGAATACTCGAAGGCACCAGAGGATAGTAGTGGA...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGGATGGATTTTGCAATaGCAAGAAACAGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLGWILQ*QETAEH
Trigger: ATGTTCAGCTGTTTCTTGCCATTGCAAAATCCATCC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGGCTATCTCGGCTGGTaGAGGCCAAGGAAAGAGACT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALGYLGW*RPRKET
Trigger: AGTCTCTTTCCTTGGCCTCCACCAGCCGAGATAGCC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACCACGCCAGAGATCAATaGCGCTGCCACAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNHARDQ*RCHSPW
Trigger: CCAGGGGCTGTGGCAGCGCCATTGATCTCTGGCGTG...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAACGAGGTTTGGCCTTaGCTTCTAGCTTCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKNEVWP*LLASVE
Trigger: CTCGACTGAAGCTAGAAGCCAAGGCCAAACCTCGTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAAAGTGCACCCCGTGTaGTTCCTCAGAGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALKVHPV*FLRAKG
Trigger: CCCCTTTGCTCTGAGGAACCACACGGGGTGCACTTT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCTCTGGTGGGTGTGGTaGTCAGGGTGGCAAACCACA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSLWWVW*SGWQTT
Trigger: TGTGGTTTGCCACCCTGACCACCACACCCACCAGAG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTAGAGTGCAGCTCTGGTaGGTGTGGTGGTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFRVQLW*VWWSGW
Trigger: CCACCCTGACCACCACACCCACCAGAGCTGCACTCT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGAGAGAGTGCAGCTCTaGTGGGTGTGGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLERVQL*WVWWSG
Trigger: CCCTGACCACCACACCCACCAGAGCTGCACTCTCTC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAATTTGTTCTGCTGCTTaGGCTGCCAATCGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRICSAA*AANRRG
Trigger: TCCTCTACGATTGGCAGCCCAAGCAGCAGAACAAAT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTCATGCTCCTCAAACTaGCCTGCAGCATCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSCSSN*PAASVL
Trigger: CAAGACAGATGCTGCAGGCCAGTTTGAGGAGCATGA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGCCCGGCATGCCTTCTaGATGAATCCCCCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSARHAF*MNPPSD
Trigger: ATCGGAAGGGGGATTCATCCAGAAGGCATGCCGGGC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAGTGGAACACCACACTaGAACCAGGAAGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSGTPH*NQEGWK
Trigger: TTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCACT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGAGTGGAACACCACACTaGAACCAGGAAGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GTPHWNQEGWKCNLRDWLSGTPH*NQEGWK
Trigger: TTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCACT...CAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCCTTCAGTCCGGAGCCTaGGTTCAGCTACGCCATGCT +
Preference number: 4 (lower is better)
Translates to: CRLSWKSFMLQLISEDPALQSGA*VQLRHA
Trigger: AGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAG...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGAATCCAATGAAGTCATaGGCTTCACTTCAGTCCGGA +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRNPMKS*ASLQSG
Trigger: TCCGGACTGAAGTGAAGCCCATGACTTCATTGGATT...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCACTGAGGAGCCCTCATaGGCCAGCATTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGTEEPS*ASIPVP
Trigger: AGGAACAGGAATGCTGGCCCATGAGGGCTCCTCAGT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCTGGAGTGCTCTAGTTaGTCCATCTGGGATGACTCT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKLECSS*SIWDDS
Trigger: AGAGTCATCCCAGATGGACCAACTAGAGCACTCCAG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCAGAAATCTGTTATCTaGAGTGCTCTAGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHQKSVI*SALVGP
Trigger: TGGACCAACTAGAGCACTCCAGATAACAGATTTCTG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCGGCTGCTTTTCCGGTaGCAGAAATCTGTTATCTGG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKRLLFR*QKSVIW
Trigger: CCAGATAACAGATTTCTGCCACCGGAAAAGCAGCCG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCCTGTCCTTCCGCCTaGCTCTCAGAATATCGGGGA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSCPSA*LSEYRG
Trigger: TCCCCGATATTCTGAGAGCCAGGCGGAAGGACAGGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAACATACACCTTCCCATaGTCTTTGGAGACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRTYTFP*SLETRQ
Trigger: CTGCCTTGTCTCCAAAGACCATGGGAAGGTGTATGT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTGCTCACGGCTTTCTTaGTCACCTGCACATACACCT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKCSRLS*SPAHTP
Trigger: AGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTATTTCACATGGACCATaGGCTTCTGGTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFISHGP*ASGGRG
Trigger: GCCCCTCCCACCAGAAGCCCATGGTCCATGTGAAAT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTTTCATCCCCCTTTCTaGAACTCTCCCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKFHPPF*NSPCSL
Trigger: AAGGGAGCAGGGAGAGTTCCAGAAAGGGGGATGAAA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTTTCATCCCCCTTTCTaGAACTCTCCCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVFHPPF*NSPCSL
Trigger: AAGGGAGCAGGGAGAGTTCCAGAAAGGGGGATGAAA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGCCTTTGTCAAATCTTaGTTCCATGAAAAACTTACC +
Preference number: 4 (lower is better)
Translates to: LCMHARARTHTHTHTHTQAFVKS*FHEKLT
Trigger: GGTAAGTTTTTCATGGAACCAAGATTTGACAAAGGC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAATGGCTGCCGGCGCTTaGGGGTTTTCACCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAMAAGA*GFSPLF
Trigger: AAACAGAGGTGAAAACCCCCAAGCGCCGGCAGCCAT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000613099.4
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGCTTCATTTGTGTCTTaGAAGGATTTGGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHASFVS*KDLGHE
Trigger: CTCATGACCCAAATCCTTCCAAGACACAAATGAAGC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCAGCCCCGCCCTAGGTaGTCTTTGGATTCCATTTTA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKQPRPR*SLDSIL
Trigger: TAAAATGGAATCCAAAGACCACCTAGGGCGGGGCTG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGACACTCTTGGGATTTaGGGAAGGGGCCGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALDTLGI*GRGRLS
Trigger: AGACAAGCGGCCCCTTCCCCAAATCCCAAGAGTGTC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGACACTCTTGGGATTTaGGGAAGGGGCCGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGADTLGI*GRGRLS
Trigger: AGACAAGCGGCCCCTTCCCCAAATCCCAAGAGTGTC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGACTCTCCATGCTCCTaGCCATGGCCTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGADSPCS*PWPPVT
Trigger: AGTTACAGGAGGCCATGGCCAGGAGCATGGAGAGTC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGCCTCCTTGTCATCTGTaGACAGCAGGCCTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVPPCHL*TAGLLL
Trigger: TAAAAGGAGGCCTGCTGTCCACAGATGACAAGGAGG...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCATCATCACTAAACTaGGTCTCTTCAGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSSSLN*VSSDAD
Trigger: GTCAGCATCTGAAGAGACCCAGTTTAGTGATGATGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCGTCCAACCATGATCTaGAGGTCCATAAATGACAGC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWRPTMI*RSINDS
Trigger: GCTGTCATTTATGGACCTCCAGATCATGGTTGGACG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAAAGTGAATGAACCTTaGGATCCAGTTTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHKVNEP*DPVWCS
Trigger: TGAACACCAAACTGGATCTCAAGGTTCATTCACTTT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCACCCGTTGGGGAAGCTaGAGGCACAGATTCCTTATC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGTRWGS*RHRFLI
Trigger: GATAAGGAATCTGTGCCTTCAGCTTCCCCAACGGGT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTACCCGTTGGGGAAGCTaGAGGCACAGATTCCTTATC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFTRWGS*RHRFLI
Trigger: GATAAGGAATCTGTGCCTTCAGCTTCCCCAACGGGT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGAAATGTAGTTCAATCTaGATGGACCCTTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWKCSSI*MDPWVV
Trigger: CACCACCCAAGGGTCCATTCAGATTGAACTACATTT...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTCCAGGGCTTGTAACTaGATCTCCAGGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSRACN*ISRTGG
Trigger: CCCACCTGTCCTGGAGATTCAGTTACAAGCCCTGGA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCCTCACAATGAGGGCTaGCCGGACAGTGATGACTTT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGPHNEG*PDSDDF
Trigger: AAAGTCATCACTGTCCGGTCAGCCCTCATTGTGAGG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGTAGCCGCCAAGAAGTaGGGTGTAAAGGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALVAAKK*GVKAQQ
Trigger: TTGCTGTGCCTTTACACCTCACTTCTTGGCGGCTAC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGACACAATCCGGATGGTaGGGTTCAGCTGCCGACGGT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLTQSGW*GSAADG
Trigger: ACCGTCGGCAGCTGAACCTCACCATCCGGATTGTGT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTTCATCCACTTCATATaGACGGCTGCTTTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKFIHFI*TAAFPV
Trigger: CACCGGAAAAGCAGCCGTTCATATGAAGTGGATGAA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAAGCAGCTCTTGTTCGGTaGCAGGAAGTTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: FLMQNPGRLPLAWLQCQQAALVR*QEVHPL
Trigger: AAGTGGATGAACTTCCTGTCACCGAACAAGAGCTGC...TTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp CCAAGGCCAGATATGAAACCGCTGACACCCCCTTCTGTTTTCACACCTTCCACTCTGAGTTCAAGCATGTaGCTGGTTGCCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PRPDMKPLTPPSVFTPSTLSSSM*LVASCV
Trigger: TACACAGCTGGCAACCAGTCACATGCTTGAACTCAG...AGTGGAAGGTGTGAAAACAGAAGGGGGTGTCAGCGGTTTCATATCTGGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGTACATCCTGTATGCTaGGTTCAAGCATGTGACTGG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKVHPVC*VQACDW
Trigger: CCAGTCACATGCTTGAACTCAGCATACAGGATGTAC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACATGCACTGTGAATCTCTaGGCTGTGATCATCAGATGC +
Preference number: 4 (lower is better)
Translates to: VSDAKSRAPATGLVTVPTCTVNL*AVIIRC
Trigger: GCATCTGATGATCACAGCTCAGAGATTCACAGTGCA...TGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACACACTTAGCTTGATCTaGGGAATGCTGATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHTLSLI*GMLILR
Trigger: TCTCAAAATCAGCATTCCTCAGATCAAGCTAAGTGT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTTCGAGCTGCCTGGCTaGGGAGTTCCTCCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSFELPG*GVPPGN
Trigger: ATTTCCAGGAGGAACTCCTCAGCCAGGCAGCTCGAA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCGATGAAGAATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTGCTCCTGTCCACCAATGATACCATaGGCCAGGCCATGGATGCCG +
Preference number: 4 (lower is better)
Translates to: AMKNSSCMLSVSLKSCSCPPMIP*ARPWMP
Trigger: CGGCATCCATGGCCTGGCTCATGGTATCATTGGTGG...ACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTCTTCATCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCGCCTGGGCTGTTTCTaGTGCAAAATCCAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFRLGCF*CKIQGA
Trigger: GGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCATCCACTGATCCACTaGGTCATCCCAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGHPLIH*VIPDSA
Trigger: AGCTGAGTCTGGGATGACTCAGTGGATCAGTGGATG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTTAGGCATTGCTGGCTaGATATCAGTTTACAAAGAG +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLGIAG*ISVYKE
Trigger: CTCTTTGTAAACTGATATTCAGCCAGCAATGCCTAA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCAAGGCCTTCCAACATaGCTATATCCTCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWQGLPT*LYPQEK
Trigger: CTTTTCCTGAGGATATAGTCATGTTGGAAGGCCTTG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTTCCCAAATAGGTATTaGGAACCCAGGCTACAAGGC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVFPNRY*EPRLQG
Trigger: GCCTTGTAGCCTGGGTTCTCAATACCTATTTGGGAA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTTTGAGAAGTGCAACTaGGAGCTGGTCAGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVFEKCN*ELVSVQ
Trigger: CTGAACACTGACCAGCTCTCAGTTGCACTTCTCAAA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTTCTCCTCCAGGGCTTaGAGTAGTGCTTTCTTACGT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVFSSRA*SSAFLR
Trigger: ACGTAAGAAAGCACTACTTCAAGCCCTGGAGGAGAA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACTCCTGTTGCTCTGCTaGCAGTCCCTCAACCACATT +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGALLLLC*QSLNHI
Trigger: AATGTGGTTGAGGGACTGTCAGCAGAGCAACAGGAG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGACCAGGAGCAAACCATaGACAGTTAGGGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVTRSKP*TVRETS
Trigger: TGAAGTCTCCCTAACTGTTCATGGTTTGCTCCTGGT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGATCACAACCCAGGTTTaGAGTGTGATCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKITTQV*SVISTS
Trigger: GGATGTGCTGATCACACTGCAAACCTGGGTTGTGAT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCCATTGCGTGGTTGTCTaGAGTGGAGCCGATTCCAAA +
Preference number: 4 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFHCVVV*SGADSK
Trigger: TTTGGAATCGGCTCCACTGCAGACAACCACGCAATG...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAGGAGGCAGCCTCATTaGGTGGTTGTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSRRQPH*VVVCSG
Trigger: TCCACTGCAGACAACCACGCAATGAGGCTGCCTCCT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCCAACTTCACGTTGTaGAGAATGCCCTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSNFTL*RMPSGG
Trigger: GCCTCCTGAGGGCATTCTGCACAACGTGAAGTTGGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTCCAACTTCACGTTGTaGAGAATGCCCTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFSNFTL*RMPSGG
Trigger: GCCTCCTGAGGGCATTCTGCACAACGTGAAGTTGGA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACTTGTAGGGAAAAGGTaGCAGGAAAACCAGCAAACA +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRLVGKR*QENQQT
Trigger: TGTTTGCTGGTTTTCCTGGCACCTTTTCCCTACAAG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAGAGGCATCGTGAACTaGCCCTGGGAATGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLRGIVN*PWEWVP
Trigger: GGGAACCCATTCCCAGGGGCAGTTCACGATGCCTCT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTAGAGGCATCGTGAACTaGCCCTGGGAATGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFRGIVN*PWEWVP
Trigger: GGGAACCCATTCCCAGGGGCAGTTCACGATGCCTCT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATAGAGATCAATGGCGCTaGCACAGCCCCTGGGCTATC +
Preference number: 4 (lower is better)
Translates to: EILYVAPRRVISTRRKKHRDQWR*HSPWAI
Trigger: GATAGCCCAGGGGCTGTGGCAGCGCCATTGATCTCT...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTAGACGACTAGCTGCCTaGTGTTGCCAGGATACAGAG +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFRRLAA*CCQDTE
Trigger: CTCTGTATCCTGGCAACAGCAGGCAGCTAGTCGTCT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCATGGAGACGACTAGCTaGCTGCTGTTGCCAGGATAC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGMETTS*LLLPGY
Trigger: GTATCCTGGCAACAGCAGGCAGCTAGTCGTCTCCAT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACATCTTTACAGTAATCTaGCATCCACGATTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHIFTVI*HPRFLG
Trigger: ACCAAGGAATCGTGGATGGCAGATTACTGTAAAGAT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATGGCAAACCACAAAGTaGACCCCGTGTGGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAWQTTK*TPCGSS
Trigger: TGAGGAACCACACGGGGTGCACTTTGTGGTTTGCCA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGACACTGGGCTCACTTaGTCCCAGCCATTTACTCTC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALDTGLT*SQPFTL
Trigger: GAGAGTAAATGGCTGGGAGCAAGTGAGCCCAGTGTC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGCCTTCCATAGTCACTaGAAAGACCACCCGCACTGG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSAFHSH*KDHPHW
Trigger: CCAGTGCGGGTGGTCTTTGCAGTGACTATGGAAGGC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGCTGTATGGAGAGCTaGCTCCTTGCCAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSCMES*LLARFQ
Trigger: CTGAAACCTGGCAAGGAGGCAGCTCTCCATACAGCT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTACGGGCCAGCTCATaGTCCTCAAACTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLRASS*SSNWPA
Trigger: TGCAGGCCAGTTTGAGGAGCATGAGCTGGCCCGTAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGACACCAGCCCGGCATaGCTTCTGGATGAATCCCCC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFDTSPA*LLDESP
Trigger: GGGGGATTCATCCAGAAGGCATGCCGGGCTGGTGTC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCCTGCCTGTTCCCTCCTaGAAGCCAGAGAATGTATAT +
Preference number: 4 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGLPVPS*KPENVY
Trigger: ATATACATTCTCTGGCTTGCAGGAGGGAACAGGCAG...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTCTGTTGTCAGTCACTaGAGCGAGACCAGCAATATC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSVVSH*SETSNI
Trigger: GATATTGCTGGTCTCGCTGCAGTGACTGACAACAGA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTCCACGTCTGAGTTGTaGTTCGCCTGCGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSTSEL*FACGQA
Trigger: AGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAATCTGTTATCTGGAGTaGTCTAGTTGGTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRICYLE*SSWSIW
Trigger: CCAGATGGACCAACTAGAGCACTCCAGATAACAGAT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGATCTGTTATCTGGAGTaGTCTAGTTGGTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWICYLE*SSWSIW
Trigger: CCAGATGGACCAACTAGAGCACTCCAGATAACAGAT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGGATTCTTTAATTTCTaGAGCTCTTGTTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHGFFNF*SSCSVT
Trigger: TGTCACCGAACAAGAGCTGCAGAAATTAAAGAATCC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTACTGGGGAACTTCACTaGGTTGACTTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFTGELH*VDLHSW
Trigger: CCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAACTGGGGAACTTCACTaGGTTGACTTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGATGELH*VDLHSW
Trigger: CCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGTAGATGTTGGTCAGTaGACTCTTACTGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRVDVGQ*TLTGEL
Trigger: AAGTTCCCCAGTAAGAGTGCACTGACCAACATCTAC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAAGCCCTTTTCCGTAGATGTTGGTCAGTaGACTCTTACTGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: KIQGACHWLGYSANKPFSVDVGQ*TLTGEL
Trigger: AAGTTCCCCAGTAAGAGTGCACTGACCAACATCTAC...GGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTCCCAGGATTCGAGCTaGCTGGCTGAGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFSQDSS*LAEEFL
Trigger: GAGGAACTCCTCAGCCAGGCAGCTCGAATCCTGGGA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp ACTGATGCCGATTGTCCATCGTCTTCCCTAAGCCATCTGATAATGTTCCAGCAATCCCAGGATTCGAGCTaGCTGGCTGAGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TDADCPSSSLSHLIMFQQSQDSS*LAEEFL
Trigger: GAGGAACTCCTCAGCCAGGCAGCTCGAATCCTGGGA...TTGCTGGAACATTATCAGATGGCTTAGGGAAGACGATGGACAATCGGCATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGCTGGCTTGGTTACAGTaGCAACAAGCCCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVLAWLQ*QQALFQ
Trigger: TTGGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAG...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTTTCCGAACCCTCTGTaGTTGAGTCCTGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLFPNPL*LSPGAA
Trigger: AGCGGCCCCAGGACTCAAGCACAGAGGGTTCGGAAA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGTGAGTTTGAAGAGCTaGTCCTGTCCTTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSVSLKS*SCPSAW
Trigger: CCAGGCGGAAGGACAGGAGCAGCTCTTCAAACTCAC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGACACTCCACTGCTCGTaGTCACGGCTTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALTLHCS*SRLSWS
Trigger: TGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGAGTCCAGCTCCAGCTaGTCTCGGTTTTCGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSESSSS*SRFSLS
Trigger: ACTCAGCGAAAACCGAGAGCAGCTGGAGCTGGACTC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGGACGTAGTGATGGCTaGGACTCTCCATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFGRSDG*DSPCSW
Trigger: CCAGGAGCATGGAGAGTCGCAGCCATCACTACGTCC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTAGTGCTGTATCCTGCTaGCATCTTGTGCAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFSAVSC*HLVQCV
Trigger: CACGCACTGCACAAGATGGCAGCAGGATACAGCACT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCTGAAAACTCGAGCTaGATGAAAGCACTTTCATTC +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSENSS*MKALSF
Trigger: GAATGAAAGTGCTTTCATGCAGCTCGAGTTTTCAGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGGGGCCATCTGGATCTaGAGCTGGGTAATGATCACT +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFGAIWI*SWVMIT
Trigger: AGTGATCATTACCCAGCTGCAGATCCAGATGGCCCC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAGTTTGCCGGATTTCTaGCTTGGTCTGCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVSLPDF*LGLHLQ
Trigger: CTGAAGATGCAGACCAAGGCAGAAATCCGGCAAACT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGACCTCGCGGGTATGCTaGTCCAACAACACAATGCTC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALTSRVC*SNNTML
Trigger: GAGCATTGTGTTGTTGGAGCAGCATACCCGCGAGGT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTGGACACATTTGCTTTaGCAAGCTCACTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GTPHWNQEGWKCNLRDWLWTHLL*QAHWWS
Trigger: AGACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCA...CAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCTCAATAGCAGCTCGCTaGCGCCCTAAGACATCCTGC +
Preference number: 4 (lower is better)
Translates to: CRLSWKSFMLQLISEDPASIAAR*RPKTSC
Trigger: GCAGGATGTCTTAGGGCGCCAGCGAGCTGCTATTGA...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTGCTTGGTGGAGGTACTaGGCACAAACTCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: VARWVRPRHNPMKSWASLAWWRY*AQTHSS
Trigger: TGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGC...AAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGCAGACATGGTCTTCTaGACTACTGGACTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAADMVF*TTGLLA
Trigger: GGCCAAGAGTCCAGTAGTCCAGAAGACCATGTCTGC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCCAGCAGGCAGACATaGTCTTCTGGACTACTGGAC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSSRQT*SSGLLD
Trigger: GTCCAGTAGTCCAGAAGACCATGTCTGCCTGCTGGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTAAGATGTCCATGTCCTaGAGATCCACGACAACGCAA +
Preference number: 4 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVKMSMS*RSTTTQ
Trigger: TTGCGTTGTCGTGGATCTCCAGGACATGGACATCTT...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCCAGGTGCCTTTCATTaGACACAGGAAGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGPGAFH*TQEGKT
Trigger: GGTCTTCCCTTCCTGTGTCCAATGAAAGGCACCTGG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCCAGGTGCCTTTCATTaGACACAGGAAGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALPGAFH*TQEGKT
Trigger: GGTCTTCCCTTCCTGTGTCCAATGAAAGGCACCTGG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGGATGGATTTTGCAATaGCAAGAAACAGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHGWILQ*QETAEH
Trigger: ATGTTCAGCTGTTTCTTGCCATTGCAAAATCCATCC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAACGCGAGATGCACCTaGAAGGTAAGTGCCAACGGA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGNARCT*KVSANG
Trigger: TCCGTTGGCACTTACCTTCCAGGTGCATCTCGCGTT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCGCTGCCACAGCCCCTaGGCTATCTCGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSRCHSP*AISAGG
Trigger: TCCACCAGCCGAGATAGCCCAGGGGCTGTGGCAGCG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTTCAGTCGAGGAGGATaGAGACGACTAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSFSRGG*RRLAAC
Trigger: GCAGGCAGCTAGTCGTCTCCATCCTCCTCGACTGAA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGTGTGGTGGTCAGGGTaGCAAACCACAAAGTGCACC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSVWWSG*QTTKCT
Trigger: GGTGCACTTTGTGGTTTGCCACCCTGACCACCACAC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTCTGGTGGGTGTGGTaGTCAGGGTGGCAAACCACA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLWWVW*SGWQTT
Trigger: TGTGGTTTGCCACCCTGACCACCACACCCACCAGAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACAGAGTGCAGCTCTGGTaGGTGTGGTGGTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNRVQLW*VWWSGW
Trigger: CCACCCTGACCACCACACCCACCAGAGCTGCACTCT...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGAGAGAGTGCAGCTCTaGTGGGTGTGGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFERVQL*WVWWSG
Trigger: CCCTGACCACCACACCCACCAGAGCTGCACTCTCTC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTTCTGGAACTACCCCTaGACTCCCACTGTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALFWNYP*TPTVRE
Trigger: CTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACAATACACCCAATCCTTTaGGCCGGGCCTGTAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTIHPIL*AGPVAA
Trigger: GGCGGCTACAGGCCCGGCCCAAAGGATTGGGTGTAT...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACAGTCTTCACTACATTaGTCCAATGAATGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRQSSLH*SNEWEP
Trigger: AGGCTCCCATTCATTGGACCAATGTAGTGAAGACTG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCCCAGCTCAATGTTCTaGGATGTATCAGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKPSSMF*DVSAVW
Trigger: CCATACAGCTGATACATCCCAGAACATTGAGCTGGG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGTTTTGGGTTCCAGGTaGAATGAGCAATTCTTTACA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHVLGSR*NEQFFT
Trigger: TGTAAAGAATTGCTCATTCCACCTGGAACCCAAAAC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGGGCGGTTTCCTTGCTaGATGACTTTCAAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFGRFPC*MTFKAR
Trigger: CCGAGCTTTGAAAGTCATCCAGCAAGGAAACCGCCC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGTCCTCCTTTGGCCTaGACGACCAACCCATGTAAC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSPPLA*TTNPCN
Trigger: GTTACATGGGTTGGTCGTCCAGGCCAAAGGAGGACT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAGTCCTCCTTTGGCCTaGACGACCAACCCATGTAAC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSPPLA*TTNPCN
Trigger: GTTACATGGGTTGGTCGTCCAGGCCAAAGGAGGACT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCAAGGCCAGATATGAAACCGCTGACACCCCCTTCTGTTTTCACACCTTCCACTGCCCCAAAAGCTCCATaGAAGTGTCAGGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: PRPDMKPLTPPSVFTPSTAPKAP*KCQDQE
Trigger: TTCTTGGTCCTGACACTTCCATGGAGCTTTTGGGGC...AGTGGAAGGTGTGAAAACAGAAGGGGGTGTCAGCGGTTTCATATCTGGCCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp AATGATACCATGAGCCAGGCCATGGATGCCGGCTACAAGGTGTTCACCACTTGTCTGGAGTGCTCTAGTTaGTCCATCTGGGATGACTCT +
Preference number: 4 (lower is better)
Translates to: NDTMSQAMDAGYKVFTTCLECSS*SIWDDS
Trigger: AGAGTCATCCCAGATGGACCAACTAGAGCACTCCAG...ACAAGTGGTGAACACCTTGTAGCCGGCATCCATGGCCTGGCTCATGGTATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGTTGACTTGCACAGCTaGGCCGGTCTCGATGACCTC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLVDLHS*AGLDDL
Trigger: GAGGTCATCGAGACCGGCCCAGCTGTGCAAGTCAAC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCCAACAAGCCCTTTTCCAAGGCCAGATATGAAACCGCTGACACCCCCTTCTGTGGCCTTAAGATCCAATaGGAGCTTGTTGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ANKPFSKARYETADTPFCGLKIQ*ELVGGE
Trigger: TTCACCTCCAACAAGCTCCCATTGGATCTTAAGGCC...ACAGAAGGGGGTGTCAGCGGTTTCATATCTGGCCTTGGAAAAGGGCTTGTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp GCCAACAAGCCCTTTTCCAAGGCCAGATATGAAACCGCTGACACCCCCTTCTGTACATACACCTTCCCATaGTCTTTGGAGACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: ANKPFSKARYETADTPFCTYTFP*SLETRQ
Trigger: CTGCCTTGTCTCCAAAGACCATGGGAAGGTGTATGT...ACAGAAGGGGGTGTCAGCGGTTTCATATCTGGCCTTGGAAAAGGGCTTGTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCATTTCACATGGACCATaGGCTTCTGGTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSISHGP*ASGGRG
Trigger: GCCCCTCCCACCAGAAGCCCATGGTCCATGTGAAAT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTCGTCAGCTGAGAGCTaGGCCTCTTTCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSSAES*ASFLLV
Trigger: CACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCTCAACCCACTTTACTaGGAATACTTTAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLNPLY*EYFSLQ
Trigger: TTGGAGACTAAAGTATTCCCAGTAAAGTGGGTTGAG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGCCAGCGCCAGTCCTaGGTGCCACAGCTCACAGCC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGQRQS*VPQLTA
Trigger: GGCTGTGAGCTGTGGCACCCAGGACTGGCGCTGGCC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGCCTTTGTCAAATCTTaGTTCCATGAAAAACTTACC +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLAFVKS*FHEKLT
Trigger: GGTAAGTTTTTCATGGAACCAAGATTTGACAAAGGC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGACCGCAGGGGCTTCTTaGAGCAGTTTCTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKTAGAS*SSFSSK
Trigger: TTTTGAAGAGAAACTGCTCCAAGAAGCCCCTGCGGT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTGCAATCCACTAACTTaGAGTTCAGCAAAGGCAACC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWCNPLT*SSAKAT
Trigger: GGTTGCCTTTGCTGAACTCCAAGTTAGTGGATTGCA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTACTTACAAACAAAGTaGCCCTGGAGCCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWYLQTK*PWSLQN
Trigger: GTTCTGAAGGCTCCAGGGCCACTTTGTTTGTAAGTA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGATTTACACAGTGGACTaGGCACTCTCACATGGCTTG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKIYTVD*ALSHGL
Trigger: CAAGCCATGTGAGAGTGCCCAGTCCACTGTGTAAAT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAACCACATTCCCTTCTaGGGTCTGCTGCCCGTACCA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSNHIPF*GLLPVP
Trigger: TGGTACGGGCAGCAGACCCCAGAAGGGAATGTGGTT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACACTGCAAATTCAGTTTaGCAAAGACATGATCTCGCT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHTANSV*QRHDLA
Trigger: AGCGAGATCATGTCTTTGCCAAACTGAATTTGCAGT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCTCTACCACATGTGTTaGTCCCACGTCAATATCCTG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKLYHMC*SHVNIL
Trigger: CAGGATATTGACGTGGGACCAACACATGTGGTAGAG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACCGAAGGCTTCCCGTTaGAATATCAAAGCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRPKASR*NIKAQV
Trigger: AACTTGAGCTTTGATATTCCAACGGGAAGCCTTCGG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
3UTR CAA 72 bp GCGATGAAGAATTCGTCCTGTATGTTGTCTGTGAGTTaGAAGAGCTGCTCCTGTCCTTCCGCCTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: AMKNSSCMLSVS*KSCSCPSAWLS
Trigger: TGAGAGCCAGGCGGAAGGACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTCTTCATCGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACCACAAAATTCTGGATaGATATCTGTCCCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRPQNSG*ISVPSV
Trigger: GACACTTGGGACAGATATTCATCCAGAATTTTGTGG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAACTGAGGGGCAAGACTaGGAAAGGTATTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRTEGQD*ERYSFC
Trigger: ACAAAAAGAATACCTTTCTCAGTCTTGCCCCTCAGT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTTCCACATTGGACACTaGGGGGCAAGACTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALFHIGH*GARLRK
Trigger: CTTTCTCAGTCTTGCCCCTCAGTGTCCAATGTGGAA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTGCTGAAAGATACAGCTaGACACATTCGTCATGCCAG +
Preference number: 4 (lower is better)
Translates to: VARWVRPRHNPMKSWASLAERYS*THSSCQ
Trigger: CTGGCATGACGAATGTGTTCAGCTGTATCTTTCAGC...AAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp AGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGCTGTTCTTAGCGGGCTaGAAGATACAGCTGAACACA +
Preference number: 4 (lower is better)
Translates to: RHNPMKSWASLQSGAWVQLFLAG*KIQLNT
Trigger: TGTGTTCAGCTGTATCTTTCAGCCCGCTAAGAACAG...CTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAAATGTAGTTCAATCTaGATGGACCCTTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKKCSSI*MDPWVV
Trigger: CACCACCCAAGGGTCCATTCAGATTGAACTACATTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAAATGTAGTTCAATCTaGATGGACCCTTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVKCSSI*MDPWVV
Trigger: CACCACCCAAGGGTCCATTCAGATTGAACTACATTT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGCCAAACAAACTTCCTaGAAAGGGGCGATCAACAAA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKAKQTS*KGAINK
Trigger: TTTGTTGATCGCCCCTTTTCAGGAAGTTTGTTTGGC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGTCTTGTCCCTTCTCTaGTTTCCTCTCCAACGCGAG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSVLSLL*FPLQRE
Trigger: CTCGCGTTGGAGAGGAAATCAGAGAAGGGACAAGAC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGACAATCATCCATGCTaGATCCCAGCTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLDNHPC*IPAPAA
Trigger: GGCTGCAGGAGCTGGGATTCAGCATGGATGATTGTC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTTTTTCAATTGGCCTTaGCACGCCAAAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWFFNWP*HAKRAL
Trigger: CAAAGCTCTTTTGGCGTGTCAAGGCCAATTGAAAAA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGACACACTCTCAGCTTTaGTCTCCACGCCAGAGATCA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALTHSQL*SPRQRS
Trigger: TGATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTCAGACGGGAAAAGGTaGGTTCAGCGAGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSDGKR*VQREEH
Trigger: ATGTTCCTCTCGCTGAACTCACCTTTTCCCGTCTGA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGAAATGGCTCCCAGCCTaGAAGAGCACGGTTATAATA +
Preference number: 4 (lower is better)
Translates to: HTGTRKGGNVTFGIGCSLKWLPA*KSTVII
Trigger: TATTATAACCGTGCTCTTTCAGGCTGGGAGCCATTT...CAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCCTCACAATGAGGGCTaGCCGGACAGTGATGACTTT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSPHNEG*PDSDDF
Trigger: AAAGTCATCACTGTCCGGTCAGCCCTCATTGTGAGG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGGGAAATTCTCCAGTaGTACCCCCAGCTCAATGTT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGEILQ*YPQLNV
Trigger: AACATTGAGCTGGGGGTATCACTGGAGAATTTCCCC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGGCATGCCTTCTGGATaGATCCCCCTTCCGATTCTC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLGMPSG*IPLPIL
Trigger: GAGAATCGGAAGGGGGATTCATCCAGAAGGCATGCC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGACCTCGGCCTTTCTTaGCATCAATACCAATGTTAT +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWDLGLS*HQYQCY
Trigger: ATAACATTGGTATTGATGTCAAGAAAGGCCGAGGTC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAAAGGAGGAGGTAACTaGTCTGTGTCACTAAATGAG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWKGGGN*SVSLNE
Trigger: CTCATTTAGTGACACAGATCAGTTACCTCCTCCTTT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCATTCATGTTGCAGTTaGTCTCAGAGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSHSCCS*SQRTLP
Trigger: GGGCAGGGTCCTCTGAGATCAACTGCAACATGAATG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGTCATCCTCCACAGCTaGGAACGCTTTCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFVILHS*ERFPGS
Trigger: GGAACCAGGAAAGCGTTCTCAGCTGTGGAGGATGAC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGCAGCTCTTGTTCGGTaGCAGGAAGTTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFAALVR*QEVHPL
Trigger: AAGTGGATGAACTTCCTGTCACCGAACAAGAGCTGC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AACAGCTTTGGAGGAGATGAGCACGCAGTAGCTGTCAATGTTCTCCACAGCGATGTGGTACCAATGAGCTaGTTGTCCACCTGTACATCC +
Preference number: 4 (lower is better)
Translates to: NSFGGDEHAVAVNVLHSDVVPMS*LSTCTS
Trigger: GGATGTACAGGTGGACAATCAGCTCATTGGTACCAC...ATCGCTGTGGAGAACATTGACAGCTACTGCGTGCTCATCTCCTCCAAAGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGAGTCACATAGAGCATaGAGGGCTGCGTGGTACCAA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSESHRA*RAAWYQ
Trigger: TTGGTACCACGCAGCCCTTCATGCTCTATGTGACTC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CATGGAGGTTTTCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGCTGCACTGTGAATCTCTaGGCTGTGATCATCAGATGC +
Preference number: 4 (lower is better)
Translates to: HGGFHHIFPPLAGRLPSGCTVNL*AVIIRC
Trigger: GCATCTGATGATCACAGCTCAGAGATTCACAGTGCA...GCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGAAAACCTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR TCA 90 bp GAGCACGCAGTAGCTGTCAATGTTCTCCACAGCGATGAAGAATTCGTCCTGTATGCCAAGAAAATCCACTaGTCCCAGGATTCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EHAVAVNVLHSDEEFVLYAKKIH*SQDSSC
Trigger: GCAGCTCGAATCCTGGGATCAGTGGATTTTCTTGGC...ATACAGGACGAATTCTTCATCGCTGTGGAGAACATTGACAGCTACTGCGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCTTGGCAGCAGAGTTTaGTACTCCGTGTGTAACATT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKLGSRV*YSVCNI
Trigger: AATGTTACACACGGAGTATCAAACTCTGCTGCCAAG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCAGCTTTGGAGGAGATaGGCACGCAGTAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSQLWRR*ARSSCQ
Trigger: TTGACAGCTACTGCGTGCTCATCTCCTCCAAAGCTG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTTTCTTGTGACAACTTaGCAGCAAGGACCTCAGATT +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWFLVTT*QQGPQI
Trigger: AATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCAAATCTTGGTTCCATaGAAAACTTACCAACGCAGC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWQILVP*KTYQRS
Trigger: GCTGCGTTGGTAAGTTTTTCATGGAACCAAGATTTG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTCATTCATTCTAAAGTaGGGCCCCTTTTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSFILK*GPFSLL
Trigger: GAGAAGGGAAAAGGGGCCTCACTTTAGAATGAATGA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGATGGGAGGGATTGGTaGCACCATCTTCAAAGCGTA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALDGRDW*HHLQSV
Trigger: TACGCTTTGAAGATGGTGTCACCAATCCCTCCCATC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTGCCGGTATTGCAGCTaGGAGAGTTTCAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALCRYCS*ESFKGM
Trigger: CATTCCCTTGAAACTCTCTCAGCTGCAATACCGGCA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTGGCTCACCCTTCAGTaGGCACAGAGAAGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFWLTLQ*AQRSSD
Trigger: GTCGCTGCTTCTCTGTGCTCACTGAAGGGTGAGCCA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATTCAGAACATTGCGATaGGCACCCACCAAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAFRTLR*APTKQQ
Trigger: TTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTTCAGAACATTGCGATaGGCACCCACCAAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGFRTLR*APTKQQ
Trigger: TTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAACAGCTTCTCTACCTaGCAACTGGGTGCAATTCAA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKNSFST*QLGAIQ
Trigger: TTGAATTGCACCCAGTTGGCAGGTAGAGAAGCTGTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGGGTTTGTAAAACCTaGTCATATACATGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHRVCKT*SYTCFA
Trigger: AGCAAAGCATGTATATGAGCAGGTTTTACAAACCCT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCATTGCGTGGTTGTCTaGAGTGGAGCCGATTCCAAA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALHCVVV*SGADSK
Trigger: TTTGGAATCGGCTCCACTGCAGACAACCACGCAATG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACATTGCGTGGTTGTCTaGAGTGGAGCCGATTCCAAA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAHCVVV*SGADSK
Trigger: TTTGGAATCGGCTCCACTGCAGACAACCACGCAATG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTAGGAGGCAGCCTCATTaGGTGGTTGTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFRRQPH*VVVCSG
Trigger: TCCACTGCAGACAACCACGCAATGAGGCTGCCTCCT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATACAGACTCCCAATGCTaGCCTGTAAGGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: EILYVAPRRVISTRRKKHTDSQC*PVRPGL
Trigger: GAGACCTGGCCTTACAGGGCAGCATTGGGAGTCTGT...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGAGACAGACTCCCAATaGTGCCCTGTAAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLETDSQ*CPVRPG
Trigger: ACCTGGCCTTACAGGGCAGCATTGGGAGTCTGTCTC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGAAGGCCACCACCTCTaGCTGGAAACGCTGAGTATG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFEGHHL*LETLSM
Trigger: CATACTCAGCGTTTCCAGGCAGAGGTGGTGGCCTTC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCCTTGTAGGGAAAAGGTaGCAGGAAAACCAGCAAACA +
Preference number: 4 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGLVGKR*QENQQT
Trigger: TGTTTGCTGGTTTTCCTGGCACCTTTTCCCTACAAG...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp GGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGGAAAGAGCTGTATCATaGTCATTCCCTAGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: GTPHWNQEGWKCNLRDWLERAVS*SFPSRH
Trigger: ATGCCGACTAGGGAATGAGCATGATACAGCTCTTTC...CAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGCTCTGGGATGGATTTTaGAATGGCAAGAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: HTGTRKGGNVTFGIGCSLLWDGF*NGKKQL
Trigger: CAGCTGTTTCTTGCCATTGCAAAATCCATCCCAGAG...CAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCACCTGGAAGGTAAGTaGCAACGGAGTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSHLEGK*QRSLTP
Trigger: TGGAGTCAGACTCCGTTGGCACTTACCTTCCAGGTG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTAGCTGCCTGCTGTTaGCAGGATACAGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLAACC*QDTEHG
Trigger: GCCATGCTCTGTATCCTGGCAACAGCAGGCAGCTAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTGGCAAACCACAAAGTaGACCCCGTGTGGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSWQTTK*TPCGSS
Trigger: TGAGGAACCACACGGGGTGCACTTTGTGGTTTGCCA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACACCCACTGTGAGAGAGTaGAGCTCTGGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTPTVRE*SSGGCG
Trigger: ACCACACCCACCAGAGCTGCACTCTCTCACAGTGGG...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCAGTGATGACTTTCCGTaGACTGCCTTCCATAGTCAC +
Preference number: 4 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFSDDFP*TAFHSH
Trigger: GTGACTATGGAAGGCAGTGCACGGAAAGTCATCACT...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp GTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCACAGGGTAGCAAGTTaGAGATTACCACAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: VARWVRPRHNPMKSWASLHRVAS*RLPQLA
Trigger: TGCCAACTGTGGTAATCTGCAACTTGCTACCCTGTG...AAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGGAGAGCTGCCTCCTTaGCAGGTTTCAGCGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFGELPP*QVSASH
Trigger: ATGGGACGCTGAAACCTGGCAAGGAGGCAGCTCTCC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCTACGGGCCAGCTCATaGTCCTCAAACTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFLRASS*SSNWPA
Trigger: TGCAGGCCAGTTTGAGGAGCATGAGCTGGCCCGTAG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGATCTCAGAGGACCCTaGCCCTTTAACAGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFDLRGP*PFNSQS
Trigger: ACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTGATCTCAGAGGACCCTaGCCCTTTAACAGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGDLRGP*PFNSQS
Trigger: ACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGAGTTGTGCTTCGCCTaGGGTCAGGCTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLELCFA*GQAFSA
Trigger: TGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGATCTGTTATCTGGAGTaGTCTAGTTGGTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKICYLE*SSWSIW
Trigger: CCAGATGGACCAACTAGAGCACTCCAGATAACAGAT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AACTTGACAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGTGGGAGCTGGCTTGGTTACAGTaGCAACAAGCCCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: NLTARTSDFTWTMGFWWELAWLQ*QQALFQ
Trigger: TTGGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAG...CTCCCACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAAAATCCAGGGCGCCTaGCACTGGCTTGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSKIQGA*HWLGYS
Trigger: ACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GACACCCCCTTCTGTTTTCACACCTTCCACTGTCGAAGTTATAACACTGGTCAGAAAATCCAGGGCGCCTaGCACTGGCTTGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: DTPFCFHTFHCRSYNTGQKIQGA*HWLGYS
Trigger: ACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTT...CTGACCAGTGTTATAACTTCGACAGTGGAAGGTGTGAAAACAGAAGGGGGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp GAATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTGCTCCTGTCCTTCCGCGCTTTCTTGGTCACCTaGACATACACCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: EFVLYVVCEFEELLLSFRAFLVT*TYTFPW
Trigger: CCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGC...GCGGAAGGACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCACACTCCACTGCTCGTaGTCACGGCTTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSTLHCS*SRLSWS
Trigger: TGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGCCAAGTTTCCATTCTaGAATCCACTAACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRAKFPF*NPLTWS
Trigger: ACTCCAAGTTAGTGGATTGCAGAATGGAAACTTGGC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTGCCATCTTGTGCAGTaGGTGAGTGCTGAGACAATC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFCHLVQ*VSAETI
Trigger: GATTGTCTCAGCACTCACGCACTGCACAAGATGGCA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGAGAACACCCAGCACTaGTGCGGCCCAAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLENTQH*CGPKQI
Trigger: AATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTTCTC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCAAAGTCTTAGGCATTaGTGGCTGAATATCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHQSLRH*WLNISL
Trigger: TAAACTGATATTCAGCCAGCAATGCCTAAGACTTTG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTCTTCAGGAATCCACTaGTCCTGTTGCTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSSGIH*SCCSAD
Trigger: GTCAGCAGAGCAACAGGAGCAGTGGATTCCTGAAGA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGTACCTCGCTGCAACTaGAAATTCAGTTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKVPRCN*KFSLAK
Trigger: CTTTGCCAAACTGAATTTGCAGTTGCAGCGAGGTAC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATTAAGTCTGGTAAGTTaGCTGAGAGCACGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGALSLVS*LRARLL
Trigger: CAGGAGCCGTGCTCTCAGGCAACTTACCAGACTTAA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGCTCCAACAACACAATaGTCTGGGTTAAATTCATTA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHAPTTQ*SGLNSL
Trigger: TAATGAATTTAACCCAGAGCATTGTGTTGTTGGAGC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTCTCTACCTGCCAACTaGGTGCAATTCAAAGAATAC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWSLPAN*VQFKEY
Trigger: GTATTCTTTGAATTGCACCCAGTTGGCAGGTAGAGA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGGAGGTAGCACTGGCTaGATACTTATTCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKGGSTG*ILIQIF
Trigger: GAAGATCTGAATAAGTATCCAGCCAGTGCTACCTCC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGATAAAGTCTGGGGATaGTCTTTACTGAATTCCACC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRDKVWG*SLLNST
Trigger: GGTGGAATTCAGTAAAGACCATCCCCAGACTTTATC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTCCGGGACGCAGAGGTaGGCCTTTGATACAACTGGA +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFSGTQR*AFDTTG
Trigger: TCCAGTTGTATCAAAGGCCCACCTCTGCGTCCCGGA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTCAATAGCAGCTCGCTaGCGCCCTAAGACATCCTGC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSIAAR*RPKTSC
Trigger: GCAGGATGTCTTAGGGCGCCAGCGAGCTGCTATTGA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTCAGATTATTTGATCTaGAACTTTCTGGGATCAAGA +
Preference number: 4 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLSDYLI*NFLGSR
Trigger: TCTTGATCCCAGAAAGTTCCAGATCAAATAATCTGA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCCTCAGACTGTGTTTaGGAATACCCGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSSDCV*EYPLGK
Trigger: CTTCCCCAACGGGTATTCCCAAACACAGTCTGAGGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTATCGTGAACTGCCCCTaGGAATGGGTTCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTIVNCP*EWVPLG
Trigger: GCCCAGGGGAACCCATTCCCAGGGGCAGTTCACGAT...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGCTTGGTGGAGGTACTaGGCACAAACTCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGAWWRY*AQTHSS
Trigger: TGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGCCCTTGCTGCTTGGTaGAGGTACTGGGCACAAACT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLALAAW*RYWAQT
Trigger: AGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGGACTACTGGACTCTTaGCCAACAGACAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSGLLDS*PTDSVG
Trigger: ACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGTCTTCTGGACTACTaGACTCTTGGCCAACAGACA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGLLDY*TLGQQT
Trigger: TGTCTGTTGGCCAAGAGTCCAGTAGTCCAGAAGACC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGGTCTTCTGGACTACTaGACTCTTGGCCAACAGACA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAGLLDY*TLGQQT
Trigger: TGTCTGTTGGCCAAGAGTCCAGTAGTCCAGAAGACC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTCGTCATGCCAGGGCTaGTCTTCTGCCCAGCATAAC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSSCQG*SSAQHN
Trigger: GTTATGCTGGGCAGAAGACCAGCCCTGGCATGACGA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGTAGTTCAATCTGAATaGACCCTTGGGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALVVQSE*TLGWCC
Trigger: GCAGCACCACCCAAGGGTCCATTCAGATTGAACTAC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGGCTATCTCGGCTGGTaGAGGCCAAGGAAAGAGACT +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFGYLGW*RPRKET
Trigger: AGTCTCTTTCCTTGGCCTCCACCAGCCGAGATAGCC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACCATCCACGATTCCTTaGTACTTACATACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRPSTIP*YLHTGQ
Trigger: TTGACCAGTATGTAAGTACCAAGGAATCGTGGATGG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAAAGTGCACCCCGTGTaGTTCCTCAGAGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLKVHPV*FLRAKG
Trigger: CCCCTTTGCTCTGAGGAACCACACGGGGTGCACTTT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGTGTGGTGGTCAGGGTaGCAAACCACAAAGTGCACC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLVWWSG*QTTKCT
Trigger: GGTGCACTTTGTGGTTTGCCACCCTGACCACCACAC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACACATGTTCCGTTCCCTTCTaGAACTACCCCTGGACTCCC +
Preference number: 4 (lower is better)
Translates to: DFKASRPNTIGNVHQSDTCSVPF*NYPWTP
Trigger: GGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACA...TGTGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTTTGTCCACAGACACTaGGCTCACTTGCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFFVHRH*AHLLPA
Trigger: GGCTGGGAGCAAGTGAGCCCAGTGTCTGTGGACAAA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATTTTGTCCACAGACACTaGGCTCACTTGCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: EILYVAPRRVISTRRKKHFVHRH*AHLLPA
Trigger: GGCTGGGAGCAAGTGAGCCCAGTGTCTGTGGACAAA...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGCAGTCTTCACTACATTaGTCCAATGAATGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GTPHWNQEGWKCNLRDWLQSSLH*SNEWEP
Trigger: AGGCTCCCATTCATTGGACCAATGTAGTGAAGACTG...CAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTCTGTGTCCATAGAGTaGCACTCTCGTTTACTGCTA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSVSIE*HSRLLL
Trigger: TAGCAGTAAACGAGAGTGCCACTCTATGGACACAGA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTCTGTGTCCATAGAGTaGCACTCTCGTTTACTGCTA +
Preference number: 4 (lower is better)
Translates to: GTPHWNQEGWKCNLRDWLSVSIE*HSRLLL
Trigger: TAGCAGTAAACGAGAGTGCCACTCTATGGACACAGA...CAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTGTAACCTTCGGGATTaGCTGTTCCCTGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFCNLRD*LFPVPW
Trigger: CCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTCATTCCGAGGCCAGTaGAACACCACACTGGAACCA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSFRGQ*NTTLEP
Trigger: TGGTTCCAGTGTGGTGTTCCACTGGCCTCGGAATGA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTCAGAGTGATAAAAGGTaGCAAGGTGGGTTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGQSDKR*QGGFVP
Trigger: TGGGACGAACCCACCTTGCCACCTTTTATCACTCTG...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGCCCCAAAAGCTCCATaGAAGTGTCAGGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALAPKAP*KCQDQE
Trigger: TTCTTGGTCCTGACACTTCCATGGAGCTTTTGGGGC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACGGCTGCTTTTCCGGTaGCAGAAATCTGTTATCTGG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGARLLFR*QKSVIW
Trigger: CCAGATAACAGATTTCTGCCACCGGAAAAGCAGCCG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGTTCAAGCATGTGACTaGTTGCCAGCTGTGTATAGT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVVQACD*LPAVYS
Trigger: ACTATACACAGCTGGCAACCAGTCACATGCTTGAAC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAGTTCAAGCATGTGACTaGTTGCCAGCTGTGTATAGT +
Preference number: 4 (lower is better)
Translates to: VSDAKSRAPATGLVTVPTVQACD*LPAVYS
Trigger: ACTATACACAGCTGGCAACCAGTCACATGCTTGAAC...TGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp GCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAAGCCCTTTTCTGAGGAGTTCCTCCTaGAAATGTTTGAGGATATCA +
Preference number: 4 (lower is better)
Translates to: AKSRAPATGLVTVPTSPFLRSSS*KCLRIS
Trigger: TGATATCCTCAAACATTTCCAGGAGGAACTCCTCAG...AAAAGGGCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAATGTTCCAGCAAACTTaGCAGCAGAGTTTGATACTC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRMFQQT*QQSLIL
Trigger: GAGTATCAAACTCTGCTGCCAAGTTTGCTGGAACAT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGTGTCTCTCACCGCCTaGGCTGTTTCTGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGVSLTA*AVSDAK
Trigger: TTTTGCATCAGAAACAGCCCAGGCGGTGAGAGACAC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTCCTGTCCTTCCGCCTaGCTCTCAGAATATCGGGGA +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFSCPSA*LSEYRG
Trigger: TCCCCGATATTCTGAGAGCCAGGCGGAAGGACAGGA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCCTTCCCATGGTCTTTaGAGACAAGGCAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFPSHGL*RQGSGR
Trigger: TCTACCACTGCCTTGTCTCCAAAGACCATGGGAAGG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTGCTCCTGTCCTTCCGCCCTTCCCATGGTCTTTaGAGACAAGGCAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: EFVLYVVCEFEELLLSFRPSHGL*RQGSGR
Trigger: TCTACCACTGCCTTGTCTCCAAAGACCATGGGAAGG...GCGGAAGGACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTGCTCACGGCTTTCTTaGTCACCTGCACATACACCT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGCSRLS*SPAHTP
Trigger: AGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTGGACCATGGGCTTCTaGTGGGAGGGGCCGGGGATG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPWTMGF*WEGPGM
Trigger: CATCCCCGGCCCCTCCCACCAGAAGCCCATGGTCCA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCGATGAAGAATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTGCTCCTGTATTTCACATGGACCATaGGCTTCTGGTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AMKNSSCMLSVSLKSCSCISHGP*ASGGRG
Trigger: GCCCCTCCCACCAGAAGCCCATGGTCCATGTGAAAT...ACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTCTTCATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp TCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGCTGTCTGAATACATATTTTTCCACCTCTaGCAGGCAGGCTCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SSYFSTSGRQAPKWLSEYIFFHL*QAGSQV
Trigger: CACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATAT...GTATTCAGACAGCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGACTCCCCTTTCTGCTaGCGGTCATTCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALDSPFC*RSFFHF
Trigger: GAAATGGAAGAATGACCGCCAGCAGAAAGGGGAGTC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGCTTCATTTGTGTCTTaGAAGGATTTGGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWASFVS*KDLGHE
Trigger: CTCATGACCCAAATCCTTCCAAGACACAAATGAAGC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGCTTCATTTGTGTCTTaGAAGGATTTGGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRASFVS*KDLGHE
Trigger: CTCATGACCCAAATCCTTCCAAGACACAAATGAAGC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACAGCCCCGCCCTAGGTaGTCTTTGGATTCCATTTTA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAQPRPR*SLDSIL
Trigger: TAAAATGGAATCCAAAGACCACCTAGGGCGGGGCTG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCCTTCTGGCCTTGTCTaGCCCAGGGCTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPPSGLV*PRAAGQ
Trigger: CTGCCCTGCAGCCCTGGGCCAGACAAGGCCAGAAGG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGTCTTAGGCATTGCTaGCTGAATATCAGTTTACAA +
Preference number: 4 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSLRHC*LNISLQ
Trigger: TTGTAAACTGATATTCAGCCAGCAATGCCTAAGACT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGACACTCTTGGGATTTaGGGAAGGGGCCGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFDTLGI*GRGRLS
Trigger: AGACAAGCGGCCCCTTCCCCAAATCCCAAGAGTGTC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCCTTCTTTTGTGAAATaGCTGCTCCCGGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSPSFVK*LLPGLC
Trigger: GCAGAGACCCGGGAGCAGCCATTTCACAAAAGAAGG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAGTGCAACTGAGAGCTaGTCAGTGTTCAGGTTATTG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVSATES*SVFRLL
Trigger: CAATAACCTGAACACTGACCAGCTCTCAGTTGCACT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGATCTGGATCTGCAGCTaGGTAATGATCACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVIWICS*VMITSV
Trigger: GACAGAAGTGATCATTACCCAGCTGCAGATCCAGAT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAGCCGCCTCTCAAAGTaGCTGTGCGCCGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFSRLSK*LCAGFL
Trigger: GAGAAATCCGGCGCACAGCCACTTTGAGAGGCGGCT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGCCGGATTTCTGCCTTaGTCTGCATCTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALAGFLP*SASSAC
Trigger: ACAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTTTACAGTGTCCAAATaGGACGAAGCTAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVFTVSK*DEARSN
Trigger: GTTTGACCTAGCTTCGTCTCATTTGGACACTGTAAA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATGTGTTCACTGGATCCTaGAGTCCAGACTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: EILYVAPRRVISTRRKKHVFTGS*SPDSME
Trigger: CTCCATGGAGTCTGGACTTCAGGATCCAGTGAACAC...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCACTCTCCATGGCATGTaGGGTCACTTAGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSTLHGM*GHLETD
Trigger: GTCTGTCTCTAAGTGACCTCACATGCCATGGAGAGT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCACTCTCCATGGCATGTaGGGTCACTTAGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: CRLSWKSFMLQLISEDPATLHGM*GHLETD
Trigger: GTCTGTCTCTAAGTGACCTCACATGCCATGGAGAGT...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCTCTGCCTGGAAACGCTaGGTATGCACATACTGCACA +
Preference number: 4 (lower is better)
Translates to: CRLSWKSFMLQLISEDPASAWKR*VCTYCT
Trigger: TGTGCAGTATGTGCATACTCAGCGTTTCCAGGCAGA...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGAACAGCGCTGGGCTTaGTCTCTCACCGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPEQRWA*SLTVCP
Trigger: GGGGCAGACGGTGAGAGATCAAGCCCAGCGCTGTTC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCATTCACCATATCAATaGGGAAGCACATACAGGTGT +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKHSPYQ*GSTYRC
Trigger: ACACCTGTATGTGCTTCCTCATTGATATGGTGAATG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGGCCAAACAAACTTCCTaGAAAGGGGCGATCAACAAA +
Preference number: 4 (lower is better)
Translates to: RHNPMKSWASLQSGAWVQAKQTS*KGAINK
Trigger: TTTGTTGATCGCCCCTTTTCAGGAAGTTTGTTTGGC...CTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGTCTTGTCCCTTCTCTaGTTTCCTCTCCAACGCGAG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLVLSLL*FPLQRE
Trigger: CTCGCGTTGGAGAGGAAATCAGAGAAGGGACAAGAC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCCATGCAGTCATCGATaGAACAGATGCACACACTCT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGPCSHR*NRCTHS
Trigger: AGAGTGTGTGCATCTGTTTCATCGATGACTGCATGG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGTAGCCGCCAAGAAGTaGGGTGTAAAGGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLVAAKK*GVKAQQ
Trigger: TTGCTGTGCCTTTACACCTCACTTCTTGGCGGCTAC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCACTACATTGGTCCAATaGATGGGAGCCTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGTTLVQ*MGALQK
Trigger: TTTCTGTAAGGCTCCCATTCATTGGACCAATGTAGT...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACTCAGCTGCCGACGGTTaGCGTCATAGAGTCGCATTC +
Preference number: 4 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNSAADG*RHRVAF
Trigger: GAATGCGACTCTATGACGTCAACCGTCGGCAGCTGA...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGAGGTATCCCTCATGTTaGTATGGAAGGAATTATTCT +
Preference number: 4 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRRYPSC*YGRNYS
Trigger: AGAATAATTCCTTCCATATCAACATGAGGGATACCT...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCCAGGCATAATCCAATaGAGTCATGGGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGPGIIQ*SHGLHF
Trigger: GAAGTGAAGCCCATGACTTCATTGGATTATGCCTGG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCCAGGCATAATCCAATaGAGTCATGGGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFPGIIQ*SHGLHF
Trigger: GAAGTGAAGCCCATGACTTCATTGGATTATGCCTGG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCTTTGTGTCTTGGGTaGGACATCCAAAACGAGCTC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSLCLG*DIQNEL
Trigger: GAGCTCGTTTTGGATGTCTCACCCAAGACACAAAGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGTGGAGCGGGCGGCTaGGGGCTTATTGGGATTGTG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGGAGG*GLIGIV
Trigger: CACAATCCCAATAAGCCCTCAGCCGCCCGCTCCACC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCGGAAACTCCACGTCTaGGTTGTGCTTCGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSRKLHV*VVLRLR
Trigger: CCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGCTGCGTGGTACCAATaGGCTGATTGTCCACCTGTA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLAAWYQ*ADCPPV
Trigger: TACAGGTGGACAATCAGCTCATTGGTACCACGCAGC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATGCACTGTGAATCTCTaGGCTGTGATCATCAGATGC +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGACTVNL*AVIIRC
Trigger: GCATCTGATGATCACAGCTCAGAGATTCACAGTGCA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CATGGAGGTTTTCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGCAGAAACTTAGCAGCTTaGGGAGCAGTTTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: HGGFHHIFPPLAGRLPSGRNLAA*GAVSPQ
Trigger: TTGAGGAGAAACTGCTCCTCAAGCTGCTAAGTTTCT...GCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGAAAACCTCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR TCA 90 bp GCGATGAAGAATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTGCTCCTGTGATGTACTCCCGCTCTaGCTGATGCCGATTGTCCAT +
Preference number: 4 (lower is better)
Translates to: AMKNSSCMLSVSLKSCSCDVLPL*LMPIVH
Trigger: ATGGACAATCGGCATCAGTCAGAGCGGGAGTACATC...ACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTCTTCATCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCGCCTGGGCTGTTTCTaGTGCAAAATCCAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSRLGCF*CKIQGA
Trigger: GGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAGAGGTCATCGTATTTaGCTTCTAGGAAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWRGHRI*LLGKWL
Trigger: AAGCCATTTTCCTAGAAGTCAAATACGATGACCTCT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACATTTCTTGTGACAACTTaGCAGCAAGGACCTCAGATT +
Preference number: 4 (lower is better)
Translates to: VSDAKSRAPATGLVTVPTFLVTT*QQGPQI
Trigger: AATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAA...TGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTACGGAGGCGGTAACTaGATACCAATAGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLYGGGN*IPIGLP
Trigger: GGGGAGTCCTATTGGTATTCAGTTACCGCCTCCGTA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGATGATGACTCTGATATaGGAACCAGACTCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVMMTLI*EPDSRV
Trigger: GACTCTTGAGTCTGGTTCTCATATCAGAGTCATCAT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTCCACCCAACCGGACTaGAAGCAACGAGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSTQPD*KQRGIS
Trigger: AGAAATTCCTCGTTGCTTTCAGTCCGGTTGGGTGGA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTGGAGGTCCATAAATaGCAGCGAGTACCTCTCATA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGLEVHK*QRVPLI
Trigger: TATGAGAGGTACTCGCTGTCATTTATGGACCTCCAG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTATCACAACCCAGGTTTaGAGTGTGATCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFITTQV*SVISTS
Trigger: GGATGTGCTGATCACACTGCAAACCTGGGTTGTGAT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTCACGTTGTGCAGAATaGCCTCAGGAGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFSRCAE*PQEAAS
Trigger: TGAGGCTGCCTCCTGAGGGCATTCTGCACAACGTGA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGAGACAGACTCCCAATaGTGCCCTGTAAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFETDSQ*CPVRPG
Trigger: ACCTGGCCTTACAGGGCAGCATTGGGAGTCTGTCTC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCCCTGGGCTCCTCCGTaGTTGTCGTTTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTPWAPP*LSFSSD
Trigger: GTCTGAGGAAAACGACAAGCACGGAGGAGCCCAGGG...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCTCGGATGTCTCTCTaGAGCAAAGATGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSRMSL*SKDVHV
Trigger: GACATGGACATCTTTGCTGCAGAGAGACATCCGAGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTCTCGGATGTCTCTCTaGAGCAAAGATGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSRMSL*SKDVHV
Trigger: GACATGGACATCTTTGCTGCAGAGAGACATCCGAGA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAACTACTATCCTCTGGTaGCTTCGAGTATTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGATTILW*LRVFSR
Trigger: CCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAAATTCCTTTCCACCTaGAATTTCAGCCTACAAGGC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKKFLST*NFSLQG
Trigger: GCCTTGTAGGCTGAAATTGCAGGTGGAAAGGAATTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAAATTCCTTTCCACCTaGAATTTCAGCCTACAAGGC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVKFLST*NFSLQG
Trigger: GCCTTGTAGGCTGAAATTGCAGGTGGAAAGGAATTT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCAAATTCCTTTCCACCTaGAATTTCAGCCTACAAGGC +
Preference number: 4 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGKFLST*NFSLQG
Trigger: GCCTTGTAGGCTGAAATTGCAGGTGGAAAGGAATTT...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCACTGCAGCATTAGCTTaGTCTGGGATGGATTTTGCA +
Preference number: 4 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFTAALA*SGMDFA
Trigger: TGCAAAATCCATCCCAGAGCAAGCTAATGCTGCAGT...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCACCTGGAAGGTAAGTaGCAACGGAGTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLHLEGK*QRSLTP
Trigger: TGGAGTCAGACTCCGTTGGCACTTACCTTCCAGGTG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACACACACCTGGAAGGTAAGTaGCAACGGAGTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: DFKASRPNTIGNVHQSDTHLEGK*QRSLTP
Trigger: TGGAGTCAGACTCCGTTGGCACTTACCTTCCAGGTG...TGTGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp AACTTGACAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGTGGGAGATCTGTTATCTGGAGTaGTCTAGTTGGTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: NLTARTSDFTWTMGFWWEICYLE*SSWSIW
Trigger: CCAGATGGACCAACTAGAGCACTCCAGATAACAGAT...CTCCCACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAAGCATGTGACTGGTTaGCAGCTGTGTATAGTGCAC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALKHVTG*QLCIVH
Trigger: GTGCACTATACACAGCTGGCAACCAGTCACATGCTT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAAGCATGTGACTGGTTaGCAGCTGTGTATAGTGCAC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGKHVTG*QLCIVH
Trigger: GTGCACTATACACAGCTGGCAACCAGTCACATGCTT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CATGGAGGTTTTCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGCATTGGTGTTCCACCTTaGTCAGCTGTCTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: HGGFHHIFPPLAGRLPSGIGVPP*SAVFSW
Trigger: CCATGAAAAGACAGCTGAGCAAGGTGGAACACCAAT...GCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGAAAACCTCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR GCA 90 bp TTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAAATTGGTGTTCCACCTTaGTCAGCTGTCTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: FLMQNPGRLPLAWLQCQQIGVPP*SAVFSW
Trigger: CCATGAAAAGACAGCTGAGCAAGGTGGAACACCAAT...TTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTTCACCACTTGTGGCTaGATGGTACCTGATGTACTC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGFTTCG*MVPDVL
Trigger: GAGTACATCAGGTACCATGCAGCCACAAGTGGTGAA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGCTTTCTTGGTCACCTaGACATACACCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSAFLVT*TYTFPW
Trigger: CCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTAAGCTGCAGAGGAGCTaGCATCTTGTGCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFKLQRS*HLVQCC
Trigger: ACAGCACTGCACAAGATGGCAGCTCCTCTGCAGCTT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTATCCACTGCTCCTGTTaGTCTGCTGACAGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFIHCSC*SADSPS
Trigger: TGAGGGACTGTCAGCAGAGCAACAGGAGCAGTGGAT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTACCTCGCGGGTATGCTaGTCCAACAACACAATGCTC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFTSRVC*SNNTML
Trigger: GAGCATTGTGTTGTTGGAGCAGCATACCCGCGAGGT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTCTCTCTATTTGCCATaGCCACTGTCCGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSLYLP*PLSEEA
Trigger: TGCTTCTTCGGACAGTGGGCATGGCAAATAGAGAGA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCTCTCTATTTGCCATaGCCACTGTCCGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSLYLP*PLSEEA
Trigger: TGCTTCTTCGGACAGTGGGCATGGCAAATAGAGAGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTGTTGGAGAAGGAGGTaGGGTCAAGGGATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSCWRRR*GQGIVL
Trigger: AAGGACTATCCCTTGACCCCACCTCCTTCTCCAACA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGGGCTCATCCACTGTTaGAGAAGGAGGTGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFGLIHC*RRRWGQ
Trigger: TTGACCCCACCTCCTTCTCCAACAGTGGATGAGCCC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGGCAGCCTCATTGCGTaGTTGTCTGCAGTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSGSLIA*LSAVEP
Trigger: CGGCTCCACTGCAGACAACCACGCAATGAGGCTGCC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTCCATGGAGGCATGTaGCTCCAACTTCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLHGGM*LQLHVV
Trigger: CACAACGTGAAGTTGGAGCCACATGCCTCCATGGAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGAAGTCCAGACTCCATaGAGGCATGTGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLEVQTP*RHVAPT
Trigger: AGTTGGAGCCACATGCCTCCATGGAGTCTGGACTTC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGCTTTGGCAAGCTCACTaGTGGTCTTATTCAGCACTA +
Preference number: 4 (lower is better)
Translates to: RHNPMKSWASLQSGAWVQLWQAH*WSYSAL
Trigger: TAGTGCTGAATAAGACCACCAGTGAGCTTGCCAAAG...CTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTGGACACATTTGCTTTaGCAAGCTCACTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALWTHLL*QAHWWS
Trigger: AGACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGGTGTGCTACTAATTTaGACACATTTGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWGVLLI*THLLWQ
Trigger: TTGCCAAAGCAAATGTGTCCAAATTAGTAGCACACC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAAGATGTCCATGTCCTaGAGATCCACGACAACGCAA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGKMSMS*RSTTTQ
Trigger: TTGCGTTGTCGTGGATCTCCAGGACATGGACATCTT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACGGCTATCTCGGCTGGTaGAGGCCAAGGAAAGAGACT +
Preference number: 4 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNGYLGW*RPRKET
Trigger: AGTCTCTTTCCTTGGCCTCCACCAGCCGAGATAGCC...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCTATCCAAACGAGGTTTaGCCTTGGCTTCTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFYPNEV*PWLLAS
Trigger: TGAAGCTAGAAGCCAAGGCCAAACCTCGTTTGGATA...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGCAAAGGGGACAAATaGCTGCCGGCGCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSKGDK*LPALGG
Trigger: ACCCCCAAGCGCCGGCAGCCATTTGTCCCCTTTGCT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCTCATGCTCCTCAAACTaGCCTGCAGCATCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: CRLSWKSFMLQLISEDPASCSSN*PAASVL
Trigger: CAAGACAGATGCTGCAGGCCAGTTTGAGGAGCATGA...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAGCTGCCGATTATCCTaGAAATCATTCATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSCRLS*KSFMLQ
Trigger: CTGCAACATGAATGATTTCCAGGATAATCGGCAGCT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAGCTGCCGATTATCCTaGAAATCATTCATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVSCRLS*KSFMLQ
Trigger: CTGCAACATGAATGATTTCCAGGATAATCGGCAGCT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTAGTCCTCCTTTGGCCTaGACGACCAACCCATGTAAC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFSPPLA*TTNPCN
Trigger: GTTACATGGGTTGGTCGTCCAGGCCAAAGGAGGACT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGCCTTAAGATCCAATaGGAGCTTGTTGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGLKIQ*ELVGGE
Trigger: TTCACCTCCAACAAGCTCCCATTGGATCTTAAGGCC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTGCTCACGGCTTTCTTaGTCACCTGCACATACACCT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSCSRLS*SPAHTP
Trigger: AGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACTCAACCCACTTTACTaGGAATACTTTAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRLNPLY*EYFSLQ
Trigger: TTGGAGACTAAAGTATTCCCAGTAAAGTGGGTTGAG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAGAGTTTCAAGGGAATaGTCTCCAGCTGAATATCAC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVRVSRE*SPAEYH
Trigger: GTGATATTCAGCTGGAGACCATTCCCTTGAAACTCT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAAATGTCAAAGTGCTTaGTTGTGCAATCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWKCQSA*LCNHRR
Trigger: TCTCCTGTGATTGCACAACCAAGCACTTTGACATTT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCCAGGAAACCAGGACTaGAGATACTGCAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLPGNQD*RYCSIP
Trigger: TGGGATGCTGCAGTATCTCCAGTCCTGGTTTCCTGG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
3UTR CAA 72 bp CGCAAAAGCCAAGTTTCCATTCTGCAATCCACTAACTaGGAGTTCAGCAAAGGCAACCAAGCCTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RKSQVSILQSTN*EFSKGNQASEF
Trigger: GAACTCCGAGGCTTGGTTGCCTTTGCTGAACTCCAAGTTAGTGGATTGCAGAATGGAAACTTGGCTTTTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAGAAATCATGTCGTGTaGAATGAGCTTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGRNHVV*NELPPD
Trigger: GTCAGGAGGAAGCTCATTTCACACGACATGATTTCT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTAGAAATCATGTCGTGTaGAATGAGCTTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFRNHVV*NELPPD
Trigger: GTCAGGAGGAAGCTCATTTCACACGACATGATTTCT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGAAATCATGTCGTGTaGAATGAGCTTCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALRNHVV*NELPPD
Trigger: GTCAGGAGGAAGCTCATTTCACACGACATGATTTCT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACTGAACCTGAAGCTCTaGTATACAAAAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGALNLKL*YTKGGL
Trigger: CAAGCCACCTTTTGTATATCAGAGCTTCAGGTTCAG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTTCCACATTGGACACTaGGGGGCAAGACTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLFHIGH*GARLRK
Trigger: CTTTCTCAGTCTTGCCCCTCAGTGTCCAATGTGGAA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGACTAGAGAAAGTGAATaGACCTTGAGATCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: HTGTRKGGNVTFGIGCSLTRESE*TLRSSL
Trigger: CAAACTGGATCTCAAGGTTCATTCACTTTCTCTAGT...CAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCAGCAAGAGGCATCGTaGACTGCCCCTGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPQQEAS*TAPGNG
Trigger: CCCATTCCCAGGGGCAGTTCACGATGCCTCTTGCTG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACCAGAGAGCAGTGGACTaGGGAGAGATTGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNQRAVD*GEIAMD
Trigger: ATCCATGGCAATCTCTCCTCAGTCCACTGCTCTCTG...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCCACTCAGGACAGTATaGATTCTTGGATCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVPLRTV*ILGSCK
Trigger: TTTACAAGATCCAAGAATTCATACTGTCCTGAGTGG...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGCAGTTTGCATTTCTTaGAGTCAAATCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGAVCIS*SQIWLG
Trigger: CCCTAGCCAGATTTGACTTCAAGAAATGCAAACTGC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTGCAGTTTGCATTTCTTaGAGTCAAATCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGAVCIS*SQIWLG
Trigger: CCCTAGCCAGATTTGACTTCAAGAAATGCAAACTGC...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGCCAAACAAACTTCCTaGAAAGGGGCGATCAACAAA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAAKQTS*KGAINK
Trigger: TTTGTTGATCGCCCCTTTTCAGGAAGTTTGTTTGGC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCCCACCAACTCCATTTaGATTTGTACGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSPTNSI*ICTGST
Trigger: TGTGGATCCCGTACAAATTCAAATGGAGTTGGTGGG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGACACACTCTCAGCTTTaGTCTCCACGCCAGAGATCA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLTHSQL*SPRQRS
Trigger: TGATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATACACACTCTCAGCTTTaGTCTCCACGCCAGAGATCA +
Preference number: 4 (lower is better)
Translates to: EILYVAPRRVISTRRKKHTHSQL*SPRQRS
Trigger: TGATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGT...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAAATGGCTCCCAGCCTaGAAGAGCACGGTTATAATA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALKWLPA*KSTVII
Trigger: TATTATAACCGTGCTCTTTCAGGCTGGGAGCCATTT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTATGCCCAGGCTGTCTaGAAATCTGTTTTGCACTGT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALYAQAV*KSVLHC
Trigger: ACAGTGCAAAACAGATTTTCAGACAGCCTGGGCATA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGGGTTCCAGGTGGAATaGGCAATTCTTTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLGFQVE*AILYRG
Trigger: CCCTCTGTAAAGAATTGCTCATTCCACCTGGAACCC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGAACGTCCATCAGTCTaGCACACAATAGCTGATCAT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALERPSV*HTIADH
Trigger: ATGATCAGCTATTGTGTGTCAGACTGATGGACGTTC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTGAACGTCCATCAGTCTaGCACACAATAGCTGATCAT +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGERPSV*HTIADH
Trigger: ATGATCAGCTATTGTGTGTCAGACTGATGGACGTTC...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCATCTGTGTCACTAAATaGGATCCTATACGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFICVTK*DPIRSS
Trigger: GGAGCTACGTATAGGATCTCATTTAGTGACACAGAT...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGTACATCCTGTATGCTaGGTTCAAGCATGTGACTGG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSVHPVC*VQACDW
Trigger: CCAGTCACATGCTTGAACTCAGCATACAGGATGTAC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCCTTCTGTTTTCACACCTTCCACTGTCGAAGTTATAACACTGGTCAGTCCACCGTACATCCTGTATGCTaGGTTCAAGCATGTGACTGG +
Preference number: 4 (lower is better)
Translates to: PFCFHTFHCRSYNTGQSTVHPVC*VQACDW
Trigger: CCAGTCACATGCTTGAACTCAGCATACAGGATGTAC...GGTGGACTGACCAGTGTTATAACTTCGACAGTGGAAGGTGTGAAAACAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGTGGTACCAATGAGCTaGTTGTCCACCTGTACATCC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFVVPMS*LSTCTS
Trigger: GGATGTACAGGTGGACAATCAGCTCATTGGTACCAC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTGCTCCTGTCCTTCCGCAGAAACTTAGCAGCTTaGGGAGCAGTTTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: EFVLYVVCEFEELLLSFRRNLAA*GAVSPQ
Trigger: TTGAGGAGAAACTGCTCCTCAAGCTGCTAAGTTTCT...GCGGAAGGACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGCCAAGAAAATCCACTaGTCCCAGGATTCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFAKKIH*SQDSSC
Trigger: GCAGCTCGAATCCTGGGATCAGTGGATTTTCTTGGC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGATGTACTCCCGCTCTaGCTGATGCCGATTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFDVLPL*LMPIVH
Trigger: ATGGACAATCGGCATCAGTCAGAGCGGGAGTACATC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCACCAATGATACCATaGGCCAGGCCATGGATGCCG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPPMIP*ARPWMP
Trigger: CGGCATCCATGGCCTGGCTCATGGTATCATTGGTGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGTAGTTTATTTCTTGTaGCAACTTGACAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKVVYFL*QLDSKD
Trigger: GTCCTTGCTGTCAAGTTGTCACAAGAAATAAACTAC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGCTGTCTGAATACTCCCAAGTGGCTGTCTaGATACAAATAAACACTGGC +
Preference number: 4 (lower is better)
Translates to: SSYFSTSGRQAPKWLSEYSQVAV*IQINTG
Trigger: GCCAGTGTTTATTTGTATTCAGACAGCCACTTGGGA...GTATTCAGACAGCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGGAATGGTCTCCAGCTaGATATCACAATCAATACGG +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFGMVSS*ISQSIR
Trigger: CCGTATTGATTGTGATATTCAGCTGGAGACCATTCC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGAAGGATTTGGGTCATaGGTTATAAACACCAAAACC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKEGFGS*VINTKT
Trigger: GGTTTTGGTGTTTATAACTCATGACCCAAATCCTTC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGCACTTTCATTCATTTaGGGAGTTCCTTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAALSFI*GVPCSL
Trigger: CAAGGAGCAAGGAACTCCTCAAATGAATGAAAGTGC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCCTGCGGATTGTATATaGTGTTCAAGGGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLPADCI*CSRALC
Trigger: GCACAAGGCCCTTGAACATCATATACAATCCGCAGG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGACTGTAGGTGAACGTTaGACTTCTCTACCACATGTG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALTVGER*TSLPHV
Trigger: CACATGTGGTAGAGAAGTTCAACGTTCACCTACAGT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCATCGATGGGCACTCTaGACTCACAAACTGATATTC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALHRWAL*THKLIF
Trigger: GAATATCAGTTTGTGAGTTCAGAGTGCCCATCGATG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTGTAGGGAAATCACCTaGAGAGTACTGTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVCREIT*RVLSKF
Trigger: GAATTTAGACAGTACTCTTCAGGTGATTTCCCTACA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAGCTTCAGTGAGGGCTaGATCTTCCATTCTGACAAA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSFSEG*IFHSDK
Trigger: TTTGTCAGAATGGAAGATGCAGCCCTCACTGAAGCT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAACAGCTTCTCTACCTaGCAACTGGGTGCAATTCAA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALNSFST*QLGAIQ
Trigger: TTGAATTGCACCCAGTTGGCAGGTAGAGAAGCTGTT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTAACAGCTTCTCTACCTaGCAACTGGGTGCAATTCAA +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFNSFST*QLGAIQ
Trigger: TTGAATTGCACCCAGTTGGCAGGTAGAGAAGCTGTT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTCTTGGACTTCCTTTTaGTTTTTCCGGGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSWTSF*FFRDAE
Trigger: CTCTGCGTCCCGGAAAAAGCAAAAGGAAGTCCAAGA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCATCACAACCCAGGTTTaGAGTGTGATCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSITTQV*SVISTS
Trigger: GGATGTGCTGATCACACTGCAAACCTGGGTTGTGAT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTTCACGTTGTGCAGAATaGCCTCAGGAGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTSRCAE*PQEAAS
Trigger: TGAGGCTGCCTCCTGAGGGCATTCTGCACAACGTGA...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCTTGTAGGGAAAAGGTaGCAGGAAAACCAGCAAACA +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFLVGKR*QENQQT
Trigger: TGTTTGCTGGTTTTCCTGGCACCTTTTCCCTACAAG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGAAAGAGCTGTATCATaGTCATTCCCTAGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALERAVS*SFPSRH
Trigger: ATGCCGACTAGGGAATGAGCATGATACAGCTCTTTC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGAAAGAGCTGTATCATaGTCATTCCCTAGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGERAVS*SFPSRH
Trigger: ATGCCGACTAGGGAATGAGCATGATACAGCTCTTTC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCTCTGGGATGGATTTTaGAATGGCAAGAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLWDGF*NGKKQL
Trigger: CAGCTGTTTCTTGCCATTGCAAAATCCATCCCAGAG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCACCTGGAAGGTAAGTaGCAACGGAGTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFHLEGK*QRSLTP
Trigger: TGGAGTCAGACTCCGTTGGCACTTACCTTCCAGGTG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCTCTCCAACGCGAGATaGACCTGGAAGGTAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTLSNAR*TWKVSA
Trigger: GGCACTTACCTTCCAGGTGCATCTCGCGTTGGAGAG...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAAACAACCAACTTGCTaGCTTTTTCAATTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKKQPTC*LFQLAL
Trigger: CAAGGCCAATTGAAAAAGGCAGCAAGTTGGTTGTTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCTTAAACAACCAACTTaGTGCCTTTTTCAATTGGCC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKLKQPT*CLFQLA
Trigger: GGCCAATTGAAAAAGGCAGCAAGTTGGTTGTTTAAG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGAGATCAATGGCGCTaGCACAGCCCCTGGGCTATC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSRDQWR*HSPWAI
Trigger: GATAGCCCAGGGGCTGTGGCAGCGCCATTGATCTCT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAGACGACTAGCTGCCTaGTGTTGCCAGGATACAGAG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFRRLAA*CCQDTE
Trigger: CTCTGTATCCTGGCAACAGCAGGCAGCTAGTCGTCT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTGCCTTCCATAGTCACTaGAAAGACCACCCGCACTGG +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTAFHSH*KDHPHW
Trigger: CCAGTGCGGGTGGTCTTTGCAGTGACTATGGAAGGC...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGACACCAGCCCGGCATaGCTTCTGGATGAATCCCCC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPDTSPA*LLDESP
Trigger: GGGGGATTCATCCAGAAGGCATGCCGGGCTGGTGTC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCCTGGGCGGTTTCCTTaGTGGATGACTTTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLPGRFP*WMTFKA
Trigger: AGCTTTGAAAGTCATCCAGCAAGGAAACCGCCCAGG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGGCAAATTCCCTCTGTaGAAATGCAAGCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALGKFPL*KCKLVR
Trigger: TCTCACAAGCTTGCATTTGCACAGAGGGAATTTGCC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGATCTCAGAGGACCCTaGCCCTTTAACAGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLDLRGP*PFNSQS
Trigger: ACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCTTCATATGAACGGCTaGTTTTCCGGTGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLHMNG*FSGGRN
Trigger: ATTTCTGCCACCGGAAAAGCAGCCGTTCATATGAAG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GACACCCCCTTCTGTTTTCACACCTTCCACTGTCGAAGTTATAACACTGGTCAGAAGCATGTGACTGGTTaGCAGCTGTGTATAGTGCAC +
Preference number: 4 (lower is better)
Translates to: DTPFCFHTFHCRSYNTGQKHVTG*QLCIVH
Trigger: GTGCACTATACACAGCTGGCAACCAGTCACATGCTT...CTGACCAGTGTTATAACTTCGACAGTGGAAGGTGTGAAAACAGAAGGGGGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTACTGGGGAACTTCACTaGGTTGACTTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFTGELH*VDLHSW
Trigger: CCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGTAGATGTTGGTCAGTaGACTCTTACTGGGGAACTT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGVDVGQ*TLTGEL
Trigger: AAGTTCCCCAGTAAGAGTGCACTGACCAACATCTAC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGCTGTGGAGCTACGATaGCTGCCTGTGGCTTTATTA +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFAVELR*LPVALL
Trigger: TAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTCCCTTCTCCCTATCTaGTTAATCCTTACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVSLLPI*LILTEK
Trigger: CTTTTCTGTAAGGATTAAGCAGATAGGGAGAAGGGA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAGTGCTGTATCCTGCTaGCATCTTGTGCAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFSAVSC*HLVQCV
Trigger: CACGCACTGCACAAGATGGCAGCAGGATACAGCACT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTGCAGTGCTGTATCCTaGTGCCATCTTGTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFCSAVS*CHLVQC
Trigger: GCACTGCACAAGATGGCAGCAGGATACAGCACTGCA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAAGCTGCAGAGGAGCTaGCATCTTGTGCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFKLQRS*HLVQCC
Trigger: ACAGCACTGCACAAGATGGCAGCTCCTCTGCAGCTT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAACACCCAGCACTGCTaGGGCCCAAAGCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFNTQHC*GPKQIF
Trigger: GAAAATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGAGCCTTCAGAACATTaGGATGAGCACCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFEPSEH*DEHPPS
Trigger: GCTTGGTGGGTGCTCATCGCAATGTTCTGAAGGCTC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATCTGCTACGTCTAATTaGTTTTTCCGCATTAGTTTC +
Preference number: 4 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRSATSN*FFRISF
Trigger: GAAACTAATGCGGAAAAAGCAATTAGACGTAGCAGA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTCTGCTACGTCTAATTaGTTTTTCCGCATTAGTTTC +
Preference number: 4 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWSATSN*FFRISF
Trigger: GAAACTAATGCGGAAAAAGCAATTAGACGTAGCAGA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGTGCAACGTTTCCTCTaGTCTCTGATCTCATACAAG +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGVQRFL*SLISYK
Trigger: CTTGTATGAGATCAGAGAGCAGAGGAAACGTTGCAC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTCTCTCAAAGTGGCTGTaGGCCGGATTTCTCTCATAC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFLSKWL*AGFLSY
Trigger: GTATGAGAGAAATCCGGCGCACAGCCACTTTGAGAG...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAGTTTGCCGGATTTCTaGCTTGGTCTGCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSLPDF*LGLHLQ
Trigger: CTGAAGATGCAGACCAAGGCAGAAATCCGGCAAACT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTTCATTACGGAGTCTTaGAAACTTCCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFFITES*KLPRCS
Trigger: GGAGCAGCGGGGAAGTTTGCAAGACTCCGTAATGAA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCTTCCTCCTGACTGTTaGCACTGCCAGACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLPPDC*HCQTRK
Trigger: CTTCCGGGTCTGGCAGTGCCAACAGTCAGGAGGAAG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGGAGGTAGCACTGGCTaGATACTTATTCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFGGSTG*ILIQIF
Trigger: GAAGATCTGAATAAGTATCCAGCCAGTGCTACCTCC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTTAGAAAGGCTGGAGTaGCTGAACAATCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLERLE*LNNPFS
Trigger: GGAGAATGGATTGTTCAGCCACTCCAGCCTTTCTAA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCTCCATGGAGGCATGTaGCTCCAACTTCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFLHGGM*LQLHVV
Trigger: CACAACGTGAAGTTGGAGCCACATGCCTCCATGGAG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGAAGTCCAGACTCCATaGAGGCATGTGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFEVQTP*RHVAPT
Trigger: AGTTGGAGCCACATGCCTCCATGGAGTCTGGACTTC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCCAGTTTGGTGTTCACTaGATCCTGAAGTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: CRLSWKSFMLQLISEDPAQFGVH*ILKSRL
Trigger: GAGTCTGGACTTCAGGATCCAGTGAACACCAAACTG...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTTGGCAAGCTCACTaGTGGTCTTATTCAGCACTA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGLWQAH*WSYSAL
Trigger: TAGTGCTGAATAAGACCACCAGTGAGCTTGCCAAAG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATCGTGAACTGCCCCTaGGAATGGGTTCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPIVNCP*EWVPLG
Trigger: GCCCAGGGGAACCCATTCCCAGGGGCAGTTCACGAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGCAGACATGGTCTTCTaGACTACTGGACTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFADMVF*TTGLLA
Trigger: GGCCAAGAGTCCAGTAGTCCAGAAGACCATGTCTGC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACATCCAGCAGGCAGACATaGTCTTCTGGACTACTGGAC +
Preference number: 4 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTSSRQT*SSGLLD
Trigger: GTCCAGTAGTCCAGAAGACCATGTCTGCCTGCTGGA...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTCCACTACTATCCTCTaGTGCCTTCGAGTATTCTCT +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFSTTIL*CLRVFS
Trigger: AGAGAATACTCGAAGGCACCAGAGGATAGTAGTGGA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGAGGAGAGATTGCCATaGATAGATATGTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAEERLP*IDMSGT
Trigger: TGTGCCAGACATATCTATCCATGGCAATCTCTCCTC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGAGGAGAGATTGCCATaGATAGATATGTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFEERLP*IDMSGT
Trigger: TGTGCCAGACATATCTATCCATGGCAATCTCTCCTC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGGTGTGGAGAAAATCATaGACTAACAGTAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: RHNPMKSWASLQSGAWVQVWRKS*TNSSQS
Trigger: TGACTGGCTACTGTTAGTCCATGATTTTCTCCACAC...CTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGATATCACTGGGAGTGTaGAGAAAATCATGGACTAAC +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVISLGV*RKSWTN
Trigger: GTTAGTCCATGATTTTCTCCACACTCCCAGTGATAT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGCATTAGCTTGCTCTaGGATGGATTTTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSISLL*DGFCNG
Trigger: GCCATTGCAAAATCCATCCCAGAGCAAGCTAATGCT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTAGCATTAGCTTGCTCTaGGATGGATTTTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFSISLL*DGFCNG
Trigger: GCCATTGCAAAATCCATCCCAGAGCAAGCTAATGCT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAACGCGAGATGCACCTaGAAGGTAAGTGCCAACGGA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFNARCT*KVSANG
Trigger: TCCGTTGGCACTTACCTTCCAGGTGCATCTCGCGTT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCTGGGCTATCTCGGCTaGTGGAGGCCAAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLGYLG*WRPRKE
Trigger: CTCTTTCCTTGGCCTCCACCAGCCGAGATAGCCCAG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACACAGCTTTGTCCAAAACATaGAGGATCCACCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: DFKASRPNTIGNVHQSDTALSKT*RIHRRA
Trigger: GGCTCTTCGGTGGATCCTCCATGTTTTGGACAAAGC...TGTGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAGAGTGCAGCTCTGGTaGGTGTGGTGGTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPRVQLW*VWWSGW
Trigger: CCACCCTGACCACCACACCCACCAGAGCTGCACTCT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCATTTGTTCTGCTGCTTaGGCTGCCAATCGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: CRLSWKSFMLQLISEDPAICSAA*AANRRG
Trigger: TCCTCTACGATTGGCAGCCCAAGCAGCAGAACAAAT...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAGCAAACGAATCCCCTaGCATGATAGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSKRIP*HDSRKH
Trigger: GTGCTTCCTGCTATCATGCCAGGGGATTCGTTTGCT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCAGTCTTCACTACATTaGTCCAATGAATGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFQSSLH*SNEWEP
Trigger: AGGCTCCCATTCATTGGACCAATGTAGTGAAGACTG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGCCCGGCATGCCTTCTaGATGAATCCCCCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSARHAF*MNPPSD
Trigger: ATCGGAAGGGGGATTCATCCAGAAGGCATGCCGGGC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAGTGGAACACCACACTaGAACCAGGAAGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSGTPH*NQEGWK
Trigger: TTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCACT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAATCCAATGAAGTCATaGGCTTCACTTCAGTCCGGA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALNPMKS*ASLQSG
Trigger: TCCGGACTGAAGTGAAGCCCATGACTTCATTGGATT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCAGCAATATCTAAGATaGCAGACCCCTCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFQQYLR*QTPRWS
Trigger: GCTCCACCGAGGGGTCTGCCATCTTAGATATTGCTG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTTCTCAGCATCAGTaGCTCGTATCTGTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGLSQHQ*LVSVVS
Trigger: ACTGACAACAGATACGAGCCACTGATGCTGAGAAAG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AACAGCTTTGGAGGAGATGAGCACGCAGTAGCTGTCAATGTTCTCCACAGCGATAAATTGTTGTTCAGGTaGAACTGGCCCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: NSFGGDEHAVAVNVLHSDKLLFR*NWPQKL
Trigger: GAGCTTTTGGGGCCAGTTCCACCTGAACAACAATTT...ATCGCTGTGGAGAACATTGACAGCTACTGCGTGCTCATCTCCTCCAAAGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGATGCTTGTAGATGTTaGTCAGTGCACTCTTACTGG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGADACRC*SVHSYW
Trigger: CCAGTAAGAGTGCACTGACCAACATCTACAAGCATC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCACATACACCTTCCCATaGTCTTTGGAGACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSTYTFP*SLETRQ
Trigger: CTGCCTTGTCTCCAAAGACCATGGGAAGGTGTATGT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTTTCATCCCCCTTTCTaGAACTCTCCCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFFHPPF*NSPCSL
Trigger: AAGGGAGCAGGGAGAGTTCCAGAAAGGGGGATGAAA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGCTGGGTCAAGGGACTaGGTAGCTTTGGATATCTCC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFAGSRD*VALDIS
Trigger: GGAGATATCCAAAGCTACCCAGTCCCTTGACCCAGC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGTCGGCCAACTGTGCTaGGTCAAGGGACTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPVGQLC*VKGLGS
Trigger: GCTACCCAGTCCCTTGACCCAGCACAGTTGGCCGAC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCAAACAAAGTGGCCCTaGAGCCTTCAGAACATTGCG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLQTKWP*SLQNIA
Trigger: CGCAATGTTCTGAAGGCTCCAGGGCCACTTTGTTTG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTACTTACAAACAAAGTaGCCCTGGAGCCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFYLQTK*PWSLQN
Trigger: GTTCTGAAGGCTCCAGGGCCACTTTGTTTGTAAGTA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGCCGGATTTCTGCCTTaGTCTGCATCTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLAGFLP*SASSAC
Trigger: ACAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCCCACGTCAATATCCTaGACATGCTTCCAATTGTCT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGPTSIS*TCFQLS
Trigger: AGACAATTGGAAGCATGTCCAGGATATTGACGTGGG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCCGAAGGCTTCCCGTTaGAATATCAAAGCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGPKASR*NIKAQV
Trigger: AACTTGAGCTTTGATATTCCAACGGGAAGCCTTCGG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGCTCCATCAGTTAAGTaGGCCACATTCGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFAPSVK*ATFGPE
Trigger: CTCTGGACCGAATGTGGCCCACTTAACTGATGGAGC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGGGGATGGTCTTTACTaGATTCCACCTCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFGDGLY*IPPQSP
Trigger: AGGACTTTGAGGTGGAATTCAGTAAAGACCATCCCC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCAAAGTGAATGAACCTTaGGATCCAGTTTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFKVNEP*DPVWCS
Trigger: TGAACACCAAACTGGATCTCAAGGTTCATTCACTTT...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATCCAGGAGAACCCGTaGACAGCGCTGGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPIQENP*TALGLI
Trigger: GATCAAGCCCAGCGCTGTTCACGGGTTCTCCTGGAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGATGTCTGGCACAGTATaGCTTATTTCTTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVMSGTV*LISLSK
Trigger: TTTGGACAAAGAAATAAGTCATACTGTGCCAGACAT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTGTTCTTAGCGGGCTaGAAGATACAGCTGAACACA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLFLAG*KIQLNT
Trigger: TGTGTTCAGCTGTATCTTTCAGCCCGCTAAGAACAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGTAGCCAGTCAAATATaGGAAACACACGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGVASQI*ETHGDC
Trigger: ACAATCTCCGTGTGTTTCTCATATTTGACTGGCTAC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATCCCACCAACTCCATTTaGATTTGTACGGGATCCACA +
Preference number: 4 (lower is better)
Translates to: EILYVAPRRVISTRRKKHPTNSI*ICTGST
Trigger: TGTGGATCCCGTACAAATTCAAATGGAGTTGGTGGG...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCCATGCAGTCATCGATaGAACAGATGCACACACTCT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLPCSHR*NRCTHS
Trigger: AGAGTGTGTGCATCTGTTTCATCGATGACTGCATGG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAATCTCCAGAAAGGGTaGAGTGGGCATAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFNLQKG*SGHSLQ
Trigger: CTGAAGGCTATGCCCACTTCACCCTTTCTGGAGATT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTATGCCCAGGCTGTCTaGAAATCTGTTTTGCACTGT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSYAQAV*KSVLHC
Trigger: ACAGTGCAAAACAGATTTTCAGACAGCCTGGGCATA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCATCTGTGTCACTAAATaGGATCCTATACGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGICVTK*DPIRSS
Trigger: GGAGCTACGTATAGGATCTCATTTAGTGACACAGAT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAAAGGAGGAGGTAACTaGTCTGTGTCACTAAATGAG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAKGGGN*SVSLNE
Trigger: CTCATTTAGTGACACAGATCAGTTACCTCCTCCTTT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTCAGCTACGCCATGCTaGGTAAAGACAACCGGGACC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSATPC*VKTTGT
Trigger: GGTCCCGGTTGTCTTTACTCAGCATGGCGTAGCTGA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGTCATCCTCCACAGCTaGGAACGCTTTCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSVILHS*ERFPGS
Trigger: GGAACCAGGAAAGCGTTCTCAGCTGTGGAGGATGAC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGGTGGAGCGGGCGGCTaGGGGCTTATTGGGATTGTG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYGGAGG*GLIGIV
Trigger: CACAATCCCAATAAGCCCTCAGCCGCCCGCTCCACC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGCAGCTCTTGTTCGGTaGCAGGAAGTTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFAALVR*QEVHPL
Trigger: AAGTGGATGAACTTCCTGTCACCGAACAAGAGCTGC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCTGAGTTCAAGCATGTaGCTGGTTGCCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFLSSSM*LVASCV
Trigger: TACACAGCTGGCAACCAGTCACATGCTTGAACTCAG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTGCACTGTGAATCTCTaGGCTGTGATCATCAGATGC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLCTVNL*AVIIRC
Trigger: GCATCTGATGATCACAGCTCAGAGATTCACAGTGCA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAGAAACTTAGCAGCTTaGGGAGCAGTTTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSRNLAA*GAVSPQ
Trigger: TTGAGGAGAAACTGCTCCTCAAGCTGCTAAGTTTCT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CATGGAGGTTTTCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGCACACTTAGCTTGATCTaGGGAATGCTGATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: HGGFHHIFPPLAGRLPSGTLSLI*GMLILR
Trigger: TCTCAAAATCAGCATTCCTCAGATCAAGCTAAGTGT...GCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGAAAACCTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCTTGGCAGCAGAGTTTaGTACTCCGTGTGTAACATT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSLGSRV*YSVCNI
Trigger: AATGTTACACACGGAGTATCAAACTCTGCTGCCAAG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGCACGCAGTAGCTGTCAATGTTCTCCACAGCGATGAAGAATTCGTCCTGTATCTTGGCAGCAGAGTTTaGTACTCCGTGTGTAACATT +
Preference number: 4 (lower is better)
Translates to: EHAVAVNVLHSDEEFVLYLGSRV*YSVCNI
Trigger: AATGTTACACACGGAGTATCAAACTCTGCTGCCAAG...ATACAGGACGAATTCTTCATCGCTGTGGAGAACATTGACAGCTACTGCGTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTACTCCCGCTCTGACTaGTGCCGATTGTCCATCGTC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSYSRSD*CRLSIV
Trigger: GACGATGGACAATCGGCATCAGTCAGAGCGGGAGTA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGAGTCCTGGGGCCGCTaGGTGTGGCTGTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYESWGR*VWLCLS
Trigger: TGAGAGACACAGCCACACTCAGCGGCCCCAGGACTC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTTTCTTGTGACAACTTaGCAGCAAGGACCTCAGATT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALFLVTT*QQGPQI
Trigger: AATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCAAATCTTGGTTCCATaGAAAACTTACCAACGCAGC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGQILVP*KTYQRS
Trigger: GCTGCGTTGGTAAGTTTTTCATGGAACCAAGATTTG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTCATTCATTCTAAAGTaGGGCCCCTTTTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSFILK*GPFSLL
Trigger: GAGAAGGGAAAAGGGGCCTCACTTTAGAATGAATGA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGATCTTGTGCAGTGCGTaGGTGCTGAGACAATCATCA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLILCSA*VLRQSS
Trigger: TGATGATTGTCTCAGCACTCACGCACTGCACAAGAT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTATCTTGTGCAGTGCGTaGGTGCTGAGACAATCATCA +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFILCSA*VLRQSS
Trigger: TGATGATTGTCTCAGCACTCACGCACTGCACAAGAT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAGTTTGGCAAAGACATaGTCTCGCTTTGTATACGTG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGASLAKT*SRFVYV
Trigger: CACGTATACAAAGCGAGATCATGTCTTTGCCAAACT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTGGAGGTCCATAAATaGCAGCGAGTACCTCTCATA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLEVHK*QRVPLI
Trigger: TATGAGAGGTACTCGCTGTCATTTATGGACCTCCAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCGCTCTAACTGTAGGTaGACGTTGAACTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLRSNCR*TLNFST
Trigger: GGTAGAGAAGTTCAACGTTCACCTACAGTTAGAGCG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTCATTTCTGGGGTGGTaGGGAGAGCAAAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFSFLGW*GEQSNS
Trigger: AGAATTGCTTTGCTCTCCTCACCACCCCAGAAATGA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTGGTACCAAACACCTTaGGCACAGAAATGTACCGGC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFWYQTP*AQKCTG
Trigger: GCCGGTACATTTCTGTGCTCAAGGTGTTTGGTACCA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGGTGCCACCTATACTTaGAGTTGCAATTTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSGATYT*SCNFSA
Trigger: GGCAGAAAAATTGCAACTGCAAGTATAGGTGGCACC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp ATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGAAGGAGGCAGCCTCATTaGGTGGTTGTCTGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: IKLPIILEIIHVAVDLRGRRQPH*VVVCSG
Trigger: TCCACTGCAGACAACCACGCAATGAGGCTGCCTCCT...TCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAGTCTGGAAGATGAGTaGTTCTTCACCACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSLEDE*FFTTGS
Trigger: ACTACCAGTGGTGAAGAAGCACTCATCTTCCAGACT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCTTGTAGGGAAAAGGTaGCAGGAAAACCAGCAAACA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSLVGKR*QENQQT
Trigger: TGTTTGCTGGTTTTCCTGGCACCTTTTCCCTACAAG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATTCTCGGATGTCTCTCTaGAGCAAAGATGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: EILYVAPRRVISTRRKKHSRMSL*SKDVHV
Trigger: GACATGGACATCTTTGCTGCAGAGAGACATCCGAGA...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTAGACGACTAGCTGCCTaGTGTTGCCAGGATACAGAG +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTRRLAA*CCQDTE
Trigger: CTCTGTATCCTGGCAACAGCAGGCAGCTAGTCGTCT...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp GTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTATCTTTACAGTAATCTaGCATCCACGATTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: VARWVRPRHNPMKSWASLIFTVI*HPRFLG
Trigger: ACCAAGGAATCGTGGATGGCAGATTACTGTAAAGAT...AAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCCCACTGTGAGAGAGTaGAGCTCTGGTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPPTVRE*SSGGCG
Trigger: ACCACACCCACCAGAGCTGCACTCTCTCACAGTGGG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAGTGATGACTTTCCGTaGACTGCCTTCCATAGTCAC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSDDFP*TAFHSH
Trigger: GTGACTATGGAAGGCAGTGCACGGAAAGTCATCACT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAAGCATGTGACTGGTTaGCAGCTGTGTATAGTGCAC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLKHVTG*QLCIVH
Trigger: GTGCACTATACACAGCTGGCAACCAGTCACATGCTT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGAGCCAGGCCATGGATaGCGGCTACAAGGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPEPGHG*RLQGVH
Trigger: GTGAACACCTTGTAGCCGGCATCCATGGCCTGGCTC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTGGCTTGGTTACAGTaGCAACAAGCCCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLAWLQ*QQALFQ
Trigger: TTGGAAAAGGGCTTGTTGGCACTGTAACCAAGCCAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGCTTTCTTGGTCACCTaGACATACACCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFAFLVT*TYTFPW
Trigger: CCATGGGAAGGTGTATGTGCAGGTGACCAAGAAAGC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGGATGGACACTCCACTaGTCGTGCTCACGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSGWTLH*SCSRLS
Trigger: AGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGCTCATACCAGGCCTTaGTCCCAGCAGGAATTTAAA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLAHTRP*SQQEFK
Trigger: TTTAAATTCCTGCTGGGAGCAAGGCCTGGTATGAGC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGACGTAGTGATGGCTaGGACTCTCCATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGRSDG*DSPCSW
Trigger: CCAGGAGCATGGAGAGTCGCAGCCATCACTACGTCC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGGAGCTGCCATCTTGTaGAGTGCTGTATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSGAAIL*SAVSCC
Trigger: GCAGCAGGATACAGCACTGCACAAGATGGCAGCTCC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGTGCAAATGTCAAAGTaGTTGGTTGTGCAATCACAG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALVQMSK*LVVQSQ
Trigger: CTGTGATTGCACAACCAAGCACTTTGACATTTGCAC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTCATGCACCCCAGTCTaGAACAGATGGTATTTGGAG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSCTPV*NRWYLE
Trigger: CTCCAAATACCATCTGTTGCAGACTGGGGTGCATGA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTTTCCGAACCCTCTGTaGTTGAGTCCTAAAATGTCA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGFPNPL*LSPKMS
Trigger: TGACATTTTAGGACTCAAGCACAGAGGGTTCGGAAA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGCATCACGAGCGCGGTaGAACATAAAGTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSASRAR*NIKSQV
Trigger: CACCTGGGACTTTATGTTGCACCGCGCTCGTGATGC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTTCCCTTCTGGGGTCTaGTGCCCGTACCAGCCACCC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYFPSGV*CPYQPP
Trigger: GGGTGGCTGGTACGGGCAGCAGACCCCAGAAGGGAA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGTCACTGTACCTCGCTaGAACTGCAAATTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSVTVPR*NCKFSL
Trigger: CAAACTGAATTTGCAGTTGCAGCGAGGTACAGTGAC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGATTTCTGCCTTGGTCTaGATCTTCAGCTTGTTATAT +
Preference number: 4 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVISALV*IFSLLY
Trigger: ATATAACAAGCTGAAGATGCAGACCAAGGCAGAAAT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCCGCCAGGAGGAGCTaGGACTCCACCAGAACCTCG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSARRS*DSTRTS
Trigger: CGAGGTTCTGGTGGAGTCGCAGCTCCTCCTGGCGGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAGTTCCCAGGTCATCTaGGCTAAGAGAAAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGASSQVI*AKRKSQ
Trigger: TTGACTTTTTCTCTTAGCCCAGATGACCTGGGAACT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTAGTTCCCAGGTCATCTaGGCTAAGAGAAAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFSSQVI*AKRKSQ
Trigger: TTGACTTTTTCTCTTAGCCCAGATGACCTGGGAACT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGGAGGTAGCACTGGCTaGATACTTATTCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSGGSTG*ILIQIF
Trigger: GAAGATCTGAATAAGTATCCAGCCAGTGCTACCTCC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTGGCAAGCTCACTGGTaGTCTTATTCAGCACTAGAG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFWQAHW*SYSALE
Trigger: CTCTAGTGCTGAATAAGACCACCAGTGAGCTTGCCA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTGGACACATTTGCTTTaGCAAGCTCACTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFWTHLL*QAHWWS
Trigger: AGACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGGGTGTGCTACTAATTTaGACACATTTGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RHNPMKSWASLQSGAWVQGVLLI*THLLWQ
Trigger: TTGCCAAAGCAAATGTGTCCAAATTAGTAGCACACC...CTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACTCCTCAGACTGTGTTTaGGAATACCCGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNSSDCV*EYPLGK
Trigger: CTTCCCCAACGGGTATTCCCAAACACAGTCTGAGGA...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAACTGCCCCTGGGAATaGGTTCCCCTGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYNCPWE*VPLGSS
Trigger: GGAGGAGCCCAGGGGAACCCATTCCCAGGGGCAGTT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACAGGTCTTCTGGACTACTaGACTCTTGGCCAACAGACA +
Preference number: 4 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTGLLDY*TLGQQT
Trigger: TGTCTGTTGGCCAAGAGTCCAGTAGTCCAGAAGACC...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAAGATGTCCATGTCCTaGAGATCCACGACAACGCAA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLKMSMS*RSTTTQ
Trigger: TTGCGTTGTCGTGGATCTCCAGGACATGGACATCTT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCAAAGCCATCATGGAATaGGAAACCAAGTTAATGGAC +
Preference number: 4 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFKAIME*ETKLMD
Trigger: GTCCATTAACTTGGTTTCCCATTCCATGATGGCTTT...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTATCCAAACGAGGTTTaGCCTTGGCTTCTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSYPNEV*PWLLAS
Trigger: TGAAGCTAGAAGCCAAGGCCAAACCTCGTTTGGATA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCCATCCACGATTCCTTaGTACTTACATACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGPSTIP*YLHTGQ
Trigger: TTGACCAGTATGTAAGTACCAAGGAATCGTGGATGG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGCTTTGTCCAAAACATaGAGGATCCACCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFALSKT*RIHRRA
Trigger: GGCTCTTCGGTGGATCCTCCATGTTTTGGACAAAGC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000011700.10
ENST00000620676.6
CDS-3UTR CCA 90 bp ATAATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGAGAGAGTGCAGCTCTaGTGGGTGTGGTGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: IIKLPIILEIIHVAVDLRERVQL*WVWWSG
Trigger: CCCTGACCACCACACCCACCAGAGCTGCACTCTCTC...TCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTTTCTGGAACTACCCCTaGACTCCCACTGTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTFWNYP*TPTVRE
Trigger: CTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAA...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTGTTCCGTTCCCTTCTaGAACTACCCCTGGACTCCC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSCSVPF*NYPWTP
Trigger: GGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCATTGGTCCAATGAATaGGAGCCTTACAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKHWSNE*EPYRKI
Trigger: TATTTTTCTGTAAGGCTCCCATTCATTGGACCAATG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTCTGTGTCCATAGAGTaGCACTCTCGTTTACTGCTA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSVSIE*HSRLLL
Trigger: TAGCAGTAAACGAGAGTGCCACTCTATGGACACAGA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGTTATAGATCAGCCCTaGGCGGTTTCCTTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFVIDQP*AVSLLD
Trigger: ATCCAGCAAGGAAACCGCCCAGGGCTGATCTATAAC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTGTAACCTTCGGGATTaGCTGTTCCCTGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSCNLRD*LFPVPW
Trigger: CCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTGGAACCAGGAAGGGTaGAAATGTAACCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLWNQEG*KCNLRD
Trigger: ATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATTGGAACCAGGAAGGGTaGAAATGTAACCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: EILYVAPRRVISTRRKKHWNQEG*KCNLRD
Trigger: ATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCA...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGCTGCCGATTATCCTaGAAATCATTCATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSCRLS*KSFMLQ
Trigger: CTGCAACATGAATGATTTCCAGGATAATCGGCAGCT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTAGCTGCCGATTATCCTaGAAATCATTCATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGSCRLS*KSFMLQ
Trigger: CTGCAACATGAATGATTTCCAGGATAATCGGCAGCT...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTTGTTCAGGTGGAACTaGCCCCAAAAGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFLFRWN*PQKLHG
Trigger: TCCATGGAGCTTTTGGGGCCAGTTCCACCTGAACAA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAAATTGTTGTTCAGGTaGAACTGGCCCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSKLLFR*NWPQKL
Trigger: GAGCTTTTGGGGCCAGTTCCACCTGAACAACAATTT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCAGAAATCTGTTATCTaGAGTGCTCTAGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALQKSVI*SALVGP
Trigger: TGGACCAACTAGAGCACTCCAGATAACAGATTTCTG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGTTCAAGCATGTGACTaGTTGCCAGCTGTGTATAGT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSVQACD*LPAVYS
Trigger: ACTATACACAGCTGGCAACCAGTCACATGCTTGAAC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGATGCTTGTAGATGTTaGTCAGTGCACTCTTACTGG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSDACRC*SVHSYW
Trigger: CCAGTAAGAGTGCACTGACCAACATCTACAAGCATC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GAGCACGCAGTAGCTGTCAATGTTCTCCACAGCGATGAAGAATTCGTCCTGTATGATGCTTGTAGATGTTaGTCAGTGCACTCTTACTGG +
Preference number: 4 (lower is better)
Translates to: EHAVAVNVLHSDEEFVLYDACRC*SVHSYW
Trigger: CCAGTAAGAGTGCACTGACCAACATCTACAAGCATC...ATACAGGACGAATTCTTCATCGCTGTGGAGAACATTGACAGCTACTGCGTGCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAAAGTAGTATCGAATTaGTGTTCCACCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALKVVSN*CSTLLS
Trigger: GCTGAGCAAGGTGGAACACCAATTCGATACTACTTT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCATGGAGGTTTTCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGAAAGTAGTATCGAATTaGTGTTCCACCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SWRFSSYFSTSGRQAPKWKVVSN*CSTLLS
Trigger: GCTGAGCAAGGTGGAACACCAATTCGATACTACTTT...CCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGAAAACCTCCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCTGAGGAGTTCCTCCTaGAAATGTTTGAGGATATCA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLRSSS*KCLRIS
Trigger: TGATATCCTCAAACATTTCCAGGAGGAACTCCTCAG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAATGTTCCAGCAAACTTaGCAGCAGAGTTTGATACTC +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAMFQQT*QQSLIL
Trigger: GAGTATCAAACTCTGCTGCCAAGTTTGCTGGAACAT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCCTTCCCATGGTCTTTaGAGACAAGGCAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFPSHGL*RQGSGR
Trigger: TCTACCACTGCCTTGTCTCCAAAGACCATGGGAAGG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCGTCAGCTGAGAGCTaGGCCTCTTTCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSSAES*ASFLLV
Trigger: CACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCCGGGGCTTTGTTCTTaGTTGTTGCTGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPPGLCS*LLLPRQ
Trigger: CTGCCTGGGCAGCAACAACCAAGAACAAAGCCCCGG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGCCTTTGTCAAATCTTaGTTCCATGAAAAACTTACC +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKAFVKS*FHEKLT
Trigger: GGTAAGTTTTTCATGGAACCAAGATTTGACAAAGGC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTGTTTGTCCAAAACATaGAGGATCCACCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFCLSKT*RIHRRA
Trigger: GGCTCTTCGGTGGATCCTCCATGTTTTGGACAAACA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613099.4
CDS-3UTR CCA 90 bp CATGGAGGTTTTCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGCAATACAAATAAACACTaGCGTTCCAACCCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: HGGFHHIFPPLAGRLPSGNTNKH*RSNPKW
Trigger: CCACTTTGGGTTGGAACGCCAGTGTTTATTTGTATT...GCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGAAAACCTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGACCGCAGGGGCTTCTTaGAGCAGTTTCTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLTAGAS*SSFSSK
Trigger: TTTTGAAGAGAAACTGCTCCAAGAAGCCCCTGCGGT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTAGAGTTTCAAGGGAATaGTCTCCAGCTGAATATCAC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFRVSRE*SPAEYH
Trigger: GTGATATTCAGCTGGAGACCATTCCCTTGAAACTCT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTGCAATCCACTAACTTaGAGTTCAGCAAAGGCAACC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSCNPLT*SSAKAT
Trigger: GGTTGCCTTTGCTGAACTCCAAGTTAGTGGATTGCA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAGTCTTAGGCATTGCTaGCTGAATATCAGTTTACAA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKSLRHC*LNISLQ
Trigger: TTGTAAACTGATATTCAGCCAGCAATGCCTAAGACT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCTGGGCACTCTCACATaGCTTGGCACCTTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPLGTLT*LGTLLG
Trigger: CCCAAGCAAGGTGCCAAGCCATGTGAGAGTGCCCAG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCTCCTGGAGTTATCTTaGGTGTTCGTCAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFLLELS*VFVKSI
Trigger: AATGCTTTTGACGAACACCCAAGATAACTCCAGGAG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTAGAAGTTTTCATTTCTaGGGTGGTGAGGAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFRSFHF*GGEESK
Trigger: TTTGCTCTCCTCACCACCCCAGAAATGAAAACTTCT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAACAACACAATGCTCTaGGTTAAATTCATTACGGAG +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKNNTML*VKFITE
Trigger: CTCCGTAATGAATTTAACCCAGAGCATTGTGTTGTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGTAAGTTCAGCCTATaGATTTCCACTGCAACCTCA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSKFSL*ISTATS
Trigger: TGAGGTTGCAGTGGAAATCCATAGGCTGAACTTACT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
3UTR CAA 72 bp TCGGCCAACTGTGCTGGGTCAAGGGACTGGGTAGCTTaGGATATCTCCTTACCCAATTTACTCTTATTCCAT +
Preference number: 4 (lower is better)
Translates to: SANCAGSRDWVA*DISLPNLLLFH
Trigger: ATGGAATAAGAGTAAATTGGGTAAGGAGATATCCAAAGCTACCCAGTCCCTTGACCCAGCACAGTTGGCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CAA 72 bp ATGTTCTCCACAGCGATGAAGAATTCGTCCTGTATGTaGTCTGTGAGTTTGAAGAGCTGCTCCTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: MFSTAMKNSSCM*SVSLKSCSCPS
Trigger: GGAAGGACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTCTTCATCGCTGTGGAGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
3UTR CAA 72 bp AGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTaGATCTCAGAGGACCCTGCCCCTTTAACAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SCRLSWKSFMLQ*ISEDPAPLTVR
Trigger: TCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTGCATCTTCCATTCTaGCAAACACAGATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGLHLPF*QTQIQS
Trigger: ACTTTGAATCTGTGTTTGTCAGAATGGAAGATGCAG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTTTACAGTGTCCAAATaGGACGAAGCTAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSFTVSK*DEARSN
Trigger: GTTTGACCTAGCTTCGTCTCATTTGGACACTGTAAA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGGGGATGGTCTTTACTaGATTCCACCTCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFGDGLY*IPPQSP
Trigger: AGGACTTTGAGGTGGAATTCAGTAAAGACCATCCCC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGACTAGAGAAAGTGAATaGACCTTGAGATCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALTRESE*TLRSSL
Trigger: CAAACTGGATCTCAAGGTTCATTCACTTTCTCTAGT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCAGAGAGCAGTGGACTaGGGAGAGATTGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSQRAVD*GEIAMD
Trigger: ATCCATGGCAATCTCTCCTCAGTCCACTGCTCTCTG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTAAATGTAGTTCAATCTaGATGGACCCTTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFKCSSI*MDPWVV
Trigger: CACCACCCAAGGGTCCATTCAGATTGAACTACATTT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCGTAGCCAGTCAAATATaGGAAACACACGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: CRLSWKSFMLQLISEDPAVASQI*ETHGDC
Trigger: ACAATCTCCGTGTGTTTCTCATATTTGACTGGCTAC...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAGGACACATCTTCAATaGCCACAAACTCCGTACCTG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFRTHLQ*PQTPYL
Trigger: CAGGTACGGAGTTTGTGGTCATTGAAGATGTGTCCT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTACGGGATCCACAATTaGAAGAGCTGTATCATGCTC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLYGIHN*KSCIML
Trigger: GAGCATGATACAGCTCTTTCAATTGTGGATCCCGTA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGGAAATCTTCACTATTaGATGCATCCATCAATCCTG +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALGNLHY*MHPSIL
Trigger: CAGGATTGATGGATGCATTCAATAGTGAAGATTTCC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCCAGGGCTTGTAACTaGATCTCCAGGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSRACN*ISRTGG
Trigger: CCCACCTGTCCTGGAGATTCAGTTACAAGCCCTGGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCTAGTTCTTACACGCTaGAGAAAATTCAGACGGGAA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSLVLTR*RKFRRE
Trigger: TTCCCGTCTGAATTTTCTTCAGCGTGTAAGAACTAG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTAATCTCCAGAAAGGGTaGAGTGGGCATAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTNLQKG*SGHSLQ
Trigger: CTGAAGGCTATGCCCACTTCACCCTTTCTGGAGATT...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCACTACATTGGTCCAATaGATGGGAGCCTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSTTLVQ*MGALQK
Trigger: TTTCTGTAAGGCTCCCATTCATTGGACCAATGTAGT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTATGCCCAGGCTGTCTaGAAATCTGTTTTGCACTGT +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFYAQAV*KSVLHC
Trigger: ACAGTGCAAAACAGATTTTCAGACAGCCTGGGCATA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATTATGCCCAGGCTGTCTaGAAATCTGTTTTGCACTGT +
Preference number: 4 (lower is better)
Translates to: EILYVAPRRVISTRRKKHYAQAV*KSVLHC
Trigger: ACAGTGCAAAACAGATTTTCAGACAGCCTGGGCATA...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGCATGCCTTCTGGATaGATCCCCCTTCCGATTCTC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGMPSG*IPLPIL
Trigger: GAGAATCGGAAGGGGGATTCATCCAGAAGGCATGCC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCAGCTACGCCATGCTaGGTAAAGACAACCGGGACC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSATPC*VKTTGT
Trigger: GGTCCCGGTTGTCTTTACTCAGCATGGCGTAGCTGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACACCAGGCATAATCCAATaGAGTCATGGGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTPGIIQ*SHGLHF
Trigger: GAAGTGAAGCCCATGACTTCATTGGATTATGCCTGG...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCATTCATGTTGCAGTTaGTCTCAGAGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSHSCCS*SQRTLP
Trigger: GGGCAGGGTCCTCTGAGATCAACTGCAACATGAATG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGAGTCACATAGAGCATaGAGGGCTGCGTGGTACCAA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSESHRA*RAAWYQ
Trigger: TTGGTACCACGCAGCCCTTCATGCTCTATGTGACTC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTGCACTGTGAATCTCTaGGCTGTGATCATCAGATGC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFCTVNL*AVIIRC
Trigger: GCATCTGATGATCACAGCTCAGAGATTCACAGTGCA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAACACTTAGCTTGATCTaGGGAATGCTGATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGATLSLI*GMLILR
Trigger: TCTCAAAATCAGCATTCCTCAGATCAAGCTAAGTGT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGTAGTTTATTTCTTGTaGCAACTTGACAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGVVYFL*QLDSKD
Trigger: GTCCTTGCTGTCAAGTTGTCACAAGAAATAAACTAC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGCTGTCTGAATACACAGGATCTTGCTCTTaGTCCCAAATACTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: SSYFSTSGRQAPKWLSEYTGSCS*SQILLK
Trigger: CTTTAAGAGTATTTGGGATCAAGAGCAAGATCCTGT...GTATTCAGACAGCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGGAATGGTCTCCAGCTaGATATCACAATCAATACGG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFGMVSS*ISQSIR
Trigger: CCGTATTGATTGTGATATTCAGCTGGAGACCATTCC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCATCCACTGATCCACTaGGTCATCCCAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSHPLIH*VIPDSA
Trigger: AGCTGAGTCTGGGATGACTCAGTGGATCAGTGGATG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGAAGGATTTGGGTCATaGGTTATAAACACCAAAACC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGEGFGS*VINTKT
Trigger: GGTTTTGGTGTTTATAACTCATGACCCAAATCCTTC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTCTTTTAAGAGATCATaGTCTCAGGCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFSFKRS*SQAVGY
Trigger: GTAACCTACTGCCTGAGATCATGATCTCTTAAAAGA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCTCTGGATTCCTCCTaGAGCACCAGCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSLDSS*STSPQG
Trigger: GCCCTGTGGGCTGGTGCTTCAGGAGGAATCCAGAGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTTAGGCATTGCTGGCTaGATATCAGTTTACAAAGAG +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGLGIAG*ISVYKE
Trigger: CTCTTTGTAAACTGATATTCAGCCAGCAATGCCTAA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCTCATTAAATGTGCTTaGAGCTGTTCTTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFLIKCA*SCSSLN
Trigger: GTTCAGTGAAGAACAGCTTCAAGCACATTTAATGAG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGCTCAAGTTCTTATGTaGAGCCATCAAAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAAQVLM*SHQKVK
Trigger: TTTGACCTTTTGATGGCTTCACATAAGAACTTGAGC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACATCACAACCCAGGTTTaGAGTGTGATCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNITTQV*SVISTS
Trigger: GGATGTGCTGATCACACTGCAAACCTGGGTTGTGAT...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGATCTTTACAGTAATCTaGCATCCACGATTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALIFTVI*HPRFLG
Trigger: ACCAAGGAATCGTGGATGGCAGATTACTGTAAAGAT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGACACTGGGCTCACTTaGTCCCAGCCATTTACTCTC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSDTGLT*SQPFTL
Trigger: GAGAGTAAATGGCTGGGAGCAAGTGAGCCCAGTGTC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAGGAGATATATGGTATaGCCAGGCTGTCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSRRYMV*PGCLKI
Trigger: GATTTTCAGACAGCCTGGGCATACCATATATCTCCT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGACACCAGCCCGGCATaGCTTCTGGATGAATCCCCC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYDTSPA*LLDESP
Trigger: GGGGGATTCATCCAGAAGGCATGCCGGGCTGGTGTC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGGCAAATTCCCTCTGTaGAAATGCAAGCTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLGKFPL*KCKLVR
Trigger: TCTCACAAGCTTGCATTTGCACAGAGGGAATTTGCC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCTGCCTGTTCCCTCCTaGAAGCCAGAGAATGTATAT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFLPVPS*KPENVY
Trigger: ATATACATTCTCTGGCTTGCAGGAGGGAACAGGCAG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGAGTTGTGCTTCGCCTaGGGTCAGGCTTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPELCFA*GQAFSA
Trigger: TGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTTCATATGAACGGCTaGTTTTCCGGTGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLHMNG*FSGGRN
Trigger: ATTTCTGCCACCGGAAAAGCAGCCGTTCATATGAAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp ACTGATGCCGATTGTCCATCGTCTTCCCTAAGCCATCTGATAATGTTCCAGCAACTTCATATGAACGGCTaGTTTTCCGGTGGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: TDADCPSSSLSHLIMFQQLHMNG*FSGGRN
Trigger: ATTTCTGCCACCGGAAAAGCAGCCGTTCATATGAAG...TTGCTGGAACATTATCAGATGGCTTAGGGAAGACGATGGACAATCGGCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGATGGACACTCCACTaGTCGTGCTCACGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGWTLH*SCSRLS
Trigger: AGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCAATACGGGGACTGTaGCGAGACCGCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSIRGL*RDRRGF
Trigger: GAAGCCCCTGCGGTCTCGGCACAGTCCCCGTATTGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCTTCGGAACTTCACCTaGCTCTCCTTTCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLRNFT*LSFRSS
Trigger: GCTGGAACGAAAGGAGAGGCAGGTGAAGTTCCGAAG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGAGCCTTCAGAACATTaGGATGAGCACCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSEPSEH*DEHPPS
Trigger: GCTTGGTGGGTGCTCATCGCAATGTTCTGAAGGCTC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTTTTCTCTCCGTTGCTaGTGCTTGACTCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSFSLRC*CLTREV
Trigger: CACCTCCCGAGTCAAGCAGCAGCAACGGAGAGAAAA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCCCGCCACAAAATTCTaGATGAATATCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLPATKF*MNICPK
Trigger: CTTGGGACAGATATTCATCCAGAATTTTGTGGCGGG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGCCAGACCCGGAAGGTaGGCAAAACATCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYARPGR*AKHPAS
Trigger: GGAAGCCGGATGTTTTGCCCACCTTCCGGGTCTGGC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAGTTCCCAGGTCATCTaGGCTAAGAGAAAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSSQVI*AKRKSQ
Trigger: TTGACTTTTTCTCTTAGCCCAGATGACCTGGGAACT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTTAGAAAGGCTGGAGTaGCTGAACAATCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLERLE*LNNPFS
Trigger: GGAGAATGGATTGTTCAGCCACTCCAGCCTTTCTAA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTTCCAACAAGTATCTTaGGCTCATCCACTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFFQQVS*AHPLLE
Trigger: CTCCAACAGTGGATGAGCCCAAGATACTTGTTGGAA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGACTGGAAGAGAATTCTaGATGTTTCTTATCTACCAA +
Preference number: 4 (lower is better)
Translates to: CVPSGCGATMPACGFIKKTGREF*MFLIYQ
Trigger: TTGGTAGATAAGAAACATCCAGAATTCTCTTCCAGT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACATGGCAAGCTCACTGGTaGTCTTATTCAGCACTAGAG +
Preference number: 4 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTWQAHW*SYSALE
Trigger: CTCTAGTGCTGAATAAGACCACCAGTGAGCTTGCCA...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGGTGTGCTACTAATTTaGACACATTTGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALGVLLI*THLLWQ
Trigger: TTGCCAAAGCAAATGTGTCCAAATTAGTAGCACACC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACATCGTGAACTGCCCCTaGGAATGGGTTCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYIVNCP*EWVPLG
Trigger: GCCCAGGGGAACCCATTCCCAGGGGCAGTTCACGAT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGGCCAACAGACAGTGTaGGTTGCGGCCCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYGQQTV*VAALAA
Trigger: AGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTCCACTACTATCCTCTaGTGCCTTCGAGTATTCTCT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSTTIL*CLRVFS
Trigger: AGAGAATACTCGAAGGCACCAGAGGATAGTAGTGGA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTATGGATAGATATGTCTaGCACAGTATGACTTATTTC +
Preference number: 4 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVMDRYV*HSMTYF
Trigger: GAAATAAGTCATACTGTGCCAGACATATCTATCCAT...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAAAGCCATCATGGAATaGGAAACCAAGTTAATGGAC +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALKAIME*ETKLMD
Trigger: GTCCATTAACTTGGTTTCCCATTCCATGATGGCTTT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCGTCATGCCAGGGCTaGTCTTCTGCCCAGCATAAC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSSCQG*SSAQHN
Trigger: GTTATGCTGGGCAGAAGACCAGCCCTGGCATGACGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGTGTGGAGAAAATCATaGACTAACAGTAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSVWRKS*TNSSQS
Trigger: TGACTGGCTACTGTTAGTCCATGATTTTCTCCACAC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGCTATCTCGGCTGGTaGAGGCCAAGGAAAGAGACT +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGYLGW*RPRKET
Trigger: AGTCTCTTTCCTTGGCCTCCACCAGCCGAGATAGCC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTTCAGTCGAGGAGGATaGAGACGACTAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPFSRGG*RRLAAC
Trigger: GCAGGCAGCTAGTCGTCTCCATCCTCCTCGACTGAA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTAACGAGGTTTGGCCTTaGCTTCTAGCTTCAGTCGAG +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTNEVWP*LLASVE
Trigger: CTCGACTGAAGCTAGAAGCCAAGGCCAAACCTCGTT...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCCATCCACGATTCCTTaGTACTTACATACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSPSTIP*YLHTGQ
Trigger: TTGACCAGTATGTAAGTACCAAGGAATCGTGGATGG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCAGCTCTGGTGGGTGTaGTGGTCAGGGTGGCAAACC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYQLWWV*WSGWQT
Trigger: GGTTTGCCACCCTGACCACCACACCCACCAGAGCTG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTGTTTTGGGTTCCAGGTaGAATGAGCAATTCTTTACA +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGVLGSR*NEQFFT
Trigger: TGTAAAGAATTGCTCATTCCACCTGGAACCCAAAAC...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGGTTAATCAGCCAATATaGAGCAGAAATGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: HTGTRKGGNVTFGIGCSLVNQPI*SRNEDL
Trigger: AAGATCTTCATTTCTGCTCCATATTGGCTGATTAAC...CAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGGGCGGTTTCCTTGCTaGATGACTTTCAAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSGRFPC*MTFKAR
Trigger: CCGAGCTTTGAAAGTCATCCAGCAAGGAAACCGCCC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAATCCAATGAAGTCATaGGCTTCACTTCAGTCCGGA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLNPMKS*ASLQSG
Trigger: TCCGGACTGAAGTGAAGCCCATGACTTCATTGGATT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTAAATTGTTGTTCAGGTaGAACTGGCCCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFKLLFR*NWPQKL
Trigger: GAGCTTTTGGGGCCAGTTCCACCTGAACAACAATTT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGGCCTTAAGATCCAATaGGAGCTTGTTGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFGLKIQ*ELVGGE
Trigger: TTCACCTCCAACAAGCTCCCATTGGATCTTAAGGCC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATTTCACATGGACCATaGGCTTCTGGTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPISHGP*ASGGRG
Trigger: GCCCCTCCCACCAGAAGCCCATGGTCCATGTGAAAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACTCAACCCACTTTACTaGGAATACTTTAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGALNPLY*EYFSLQ
Trigger: TTGGAGACTAAAGTATTCCCAGTAAAGTGGGTTGAG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAAATGTCAAAGTGCTTaGTTGTGCAATCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGKCQSA*LCNHRR
Trigger: TCTCCTGTGATTGCACAACCAAGCACTTTGACATTT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGCTGGGTCAAGGGACTaGGTAGCTTTGGATATCTCC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSAGSRD*VALDIS
Trigger: GGAGATATCCAAAGCTACCCAGTCCCTTGACCCAGC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGTCGGCCAACTGTGCTaGGTCAAGGGACTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYVGQLC*VKGLGS
Trigger: GCTACCCAGTCCCTTGACCCAGCACAGTTGGCCGAC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGACTGCAAATTCAGTTTaGCAAAGACATGATCTCGCT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALTANSV*QRHDLA
Trigger: AGCGAGATCATGTCTTTGCCAAACTGAATTTGCAGT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAGAAGTTTTCATTTCTaGGGTGGTGAGGAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSRSFHF*GGEESK
Trigger: TTTGCTCTCCTCACCACCCCAGAAATGAAAACTTCT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCCAGAGACAGGAGACTaGGCCCTGCTATCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYPETGD*ALLSRR
Trigger: CCTTCGGGATAGCAGGGCCCAGTCTCCTGTCTCTGG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
3UTR CAA 72 bp ACATCTGCCTCTCCTAAGGTGCAAATGTCAAAGTGCTaGGTTGTGCAATCACAGGAGATGGGCAGCTATTTA +
Preference number: 4 (lower is better)
Translates to: TSASPKVQMSKC*VVQSQEMGSYL
Trigger: TAAATAGCTGCCCATCTCCTGTGATTGCACAACCAAGCACTTTGACATTTGCACCTTAGGAGAGGCAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAAACGTGCTACCCATTaGGACATTAACTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFKRATH*DINFGA
Trigger: GGCACCAAAGTTAATGTCTCAATGGGTAGCACGTTT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGACTGAGGGGCAAGACTaGGAAAGGTATTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLTEGQD*ERYSFC
Trigger: ACAAAAAGAATACCTTTCTCAGTCTTGCCCCTCAGT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCTACCAAGAATATGTTaGTGTGGACTAAGGAATCAT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLPRIC*CGLRNH
Trigger: ATGATTCCTTAGTCCACATCAACATATTCTTGGTAG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACTACCAAGAATATGTTaGTGTGGACTAAGGAATCAT +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGALPRIC*CGLRNH
Trigger: ATGATTCCTTAGTCCACATCAACATATTCTTGGTAG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCCAGGTTTGCAGTGTaGTCAGCACATCCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPRFAV*SAHPSN
Trigger: ATTGCTTGGATGTGCTGATCACACTGCAAACCTGGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTCTGCCTGGAAACGCTaGGTATGCACATACTGCACA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSAWKR*VCTYCT
Trigger: TGTGCAGTATGTGCATACTCAGCGTTTCCAGGCAGA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACATCCAGGAGAACCCGTaGACAGCGCTGGGCTTGATC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYIQENP*TALGLI
Trigger: GATCAAGCCCAGCGCTGTTCACGGGTTCTCCTGGAT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGGAAATCTTCACTATTaGATGCATCCATCAATCCTG +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSGNLHY*MHPSIL
Trigger: CAGGATTGATGGATGCATTCAATAGTGAAGATTTCC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCGGAAATCTTCACTATTaGATGCATCCATCAATCCTG +
Preference number: 4 (lower is better)
Translates to: CRLSWKSFMLQLISEDPAGNLHY*MHPSIL
Trigger: CAGGATTGATGGATGCATTCAATAGTGAAGATTTCC...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCATTATAGGAGAGTCTaGTATCCAGGGCTTGTAACT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLHYRRV*YPGLVT
Trigger: AGTTACAAGCCCTGGATATCAGACTCTCCTATAATG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATCATTATAGGAGAGTCTaGTATCCAGGGCTTGTAACT +
Preference number: 4 (lower is better)
Translates to: EILYVAPRRVISTRRKKHHYRRV*YPGLVT
Trigger: AGTTACAAGCCCTGGATATCAGACTCTCCTATAATG...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTTTTTCAATTGGCCTTaGCACGCCAAAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFFFNWP*HAKRAL
Trigger: CAAAGCTCTTTTGGCGTGTCAAGGCCAATTGAAAAA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACACATTTTTCAATTGGCCTTaGCACGCCAAAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: DFKASRPNTIGNVHQSDTFFNWP*HAKRAL
Trigger: CAAAGCTCTTTTGGCGTGTCAAGGCCAATTGAAAAA...TGTGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTCAGACGGGAAAAGGTaGGTTCAGCGAGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSDGKR*VQREEH
Trigger: ATGTTCCTCTCGCTGAACTCACCTTTTCCCGTCTGA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGACTACATTGGTCCAATaGATGGGAGCCTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLTTLVQ*MGALQK
Trigger: TTTCTGTAAGGCTCCCATTCATTGGACCAATGTAGT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp ATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGAGGGGAAATTCTCCAGTaGTACCCCCAGCTCAATGTT +
Preference number: 4 (lower is better)
Translates to: IKLPIILEIIHVAVDLRGGEILQ*YPQLNV
Trigger: AACATTGAGCTGGGGGTATCACTGGAGAATTTCCCC...TCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACACACAATCCGGATGGTaGGGTTCAGCTGCCGACGGT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYTQSGW*GSAADG
Trigger: ACCGTCGGCAGCTGAACCTCACCATCCGGATTGTGT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAGGTATCCCTCATGTTaGTATGGAAGGAATTATTCT +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGARYPSC*YGRNYS
Trigger: AGAATAATTCCTTCCATATCAACATGAGGGATACCT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAAAGGAGGAGGTAACTaGTCTGTGTCACTAAATGAG +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLKGGGN*SVSLNE
Trigger: CTCATTTAGTGACACAGATCAGTTACCTCCTCCTTT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGCTTATTGGGATTGTaGGGAACTGAGGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGLLGL*GTEEPS
Trigger: TGAGGGCTCCTCAGTTCCTCACAATCCCAATAAGCC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAGAAACTTAGCAGCTTaGGGAGCAGTTTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFRNLAA*GAVSPQ
Trigger: TTGAGGAGAAACTGCTCCTCAAGCTGCTAAGTTTCT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCACACTTAGCTTGATCTaGGGAATGCTGATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSTLSLI*GMLILR
Trigger: TCTCAAAATCAGCATTCCTCAGATCAAGCTAAGTGT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GACACCCCCTTCTGTTTTCACACCTTCCACTGTCGAAGTTATAACACTGGTCAGACACTTAGCTTGATCTaGGGAATGCTGATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: DTPFCFHTFHCRSYNTGQTLSLI*GMLILR
Trigger: TCTCAAAATCAGCATTCCTCAGATCAAGCTAAGTGT...CTGACCAGTGTTATAACTTCGACAGTGGAAGGTGTGAAAACAGAAGGGGGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCAGCTTTGGAGGAGATaGGCACGCAGTAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPQLWRR*ARSSCQ
Trigger: TTGACAGCTACTGCGTGCTCATCTCCTCCAAAGCTG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTTTCTTGTGACAACTTaGCAGCAAGGACCTCAGATT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLFLVTT*QQGPQI
Trigger: AATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGTAGTTTATTTCTTGTaGCAACTTGACAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSVVYFL*QLDSKD
Trigger: GTCCTTGCTGTCAAGTTGTCACAAGAAATAAACTAC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCTCCTAGATCCTTCTaGAGGGCCAGCGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSPRSF*RASASP
Trigger: AGGACTGGCGCTGGCCCTTCAGAAGGATCTAGGAGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGCAGTGCGTGAGTGCTaGGACAATCATCACCACCCC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYAVREC*DNHHHP
Trigger: GGGGTGGTGATGATTGTCTCAGCACTCACGCACTGC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGATGTCAAATGCCCCTaGAACCTTCTGGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSDVKCP*NLLALS
Trigger: AGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTATGATGACTCTGATATaGGAACCAGACTCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFMMTLI*EPDSRV
Trigger: GACTCTTGAGTCTGGTTCTCATATCAGAGTCATCAT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTTTTGCCTTCTTTTGTaGAATGGCTGCTCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSFCLLL*NGCSRV
Trigger: GACCCGGGAGCAGCCATTTCACAAAAGAAGGCAAAA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR TCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCAGTGTTCAGGTTATTaGCATATTTTCCCAAATAGG +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFQCSGY*HIFPNR
Trigger: CCTATTTGGGAAAATATGTCAATAACCTGAACACTG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTAGTTTGGCAAAGACATaGTCTCGCTTTGTATACGTG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFSLAKT*SRFVYV
Trigger: CACGTATACAAAGCGAGATCATGTCTTTGCCAAACT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCATCGATGGGCACTCTaGACTCACAAACTGATATTC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFHRWAL*THKLIF
Trigger: GAATATCAGTTTGTGAGTTCAGAGTGCCCATCGATG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGGTGCCACCTATACTTaGAGTTGCAATTTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFGATYT*SCNFSA
Trigger: GGCAGAAAAATTGCAACTGCAAGTATAGGTGGCACC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAGGGTTTGTAAAACCTaGTCATATACATGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGRVCKT*SYTCFA
Trigger: AGCAAAGCATGTATATGAGCAGGTTTTACAAACCCT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCTCTGGGATGGATTTTaGAATGGCAAGAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFLWDGF*NGKKQL
Trigger: CAGCTGTTTCTTGCCATTGCAAAATCCATCCCAGAG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTACTGCAGCATTAGCTTaGTCTGGGATGGATTTTGCA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFTAALA*SGMDFA
Trigger: TGCAAAATCCATCCCAGAGCAAGCTAATGCTGCAGT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAGGAGATATATGGTATaGCCAGGCTGTCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLRRYMV*PGCLKI
Trigger: GATTTTCAGACAGCCTGGGCATACCATATATCTCCT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGAGCCAGGCCATGGATaGCGGCTACAAGGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYEPGHG*RLQGVH
Trigger: GTGAACACCTTGTAGCCGGCATCCATGGCCTGGCTC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAATCCCCCAGTAAAGTaGAATCGACATCCCAATAGA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLNPPVK*NRHPNR
Trigger: TCTATTGGGATGTCGATTGCACTTTACTGGGGGATT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAAGCTGCAGAGGAGCTaGCATCTTGTGCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPKLQRS*HLVQCC
Trigger: ACAGCACTGCACAAGATGGCAGCTCCTCTGCAGCTT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAACACCCAGCACTGCTaGGGCCCAAAGCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPNTQHC*GPKQIF
Trigger: GAAAATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGTGCAAATGTCAAAGTaGTTGGTTGTGCAATCACAG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFVQMSK*LVVQSQ
Trigger: CTGTGATTGCACAACCAAGCACTTTGACATTTGCAC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCAAAGTCTTAGGCATTaGTGGCTGAATATCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGQSLRH*WLNISL
Trigger: TAAACTGATATTCAGCCAGCAATGCCTAAGACTTTG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGTCACTGTACCTCGCTaGAACTGCAAATTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFVTVPR*NCKFSL
Trigger: CAAACTGAATTTGCAGTTGCAGCGAGGTACAGTGAC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCTCTCAAAGTGGCTGTaGGCCGGATTTCTCTCATAC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLSKWL*AGFLSY
Trigger: GTATGAGAGAAATCCGGCGCACAGCCACTTTGAGAG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGTGTTTTCTCTCCGTTaGTGCTGCTTGACTCGGGAG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPVFSLR*CCLTRE
Trigger: CTCCCGAGTCAAGCAGCAGCAACGGAGAGAAAACAC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTTAAGTCTGGTAAGTTaGCTGAGAGCACGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLSLVS*LRARLL
Trigger: CAGGAGCCGTGCTCTCAGGCAACTTACCAGACTTAA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGAACCTCGCGGGTATaGTGCTCCAACAACACAATG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSRTSRV*CSNNTM
Trigger: CATTGTGTTGTTGGAGCAGCATACCCGCGAGGTTCT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTTCCCGAGTCTTCCTTaGAGTTTCAAAGAGCGATAC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFFPSLP*SFKERY
Trigger: GTATCGCTCTTTGAAACTCCAAGGAAGACTCGGGAA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCCCGCCACAAAATTCTaGATGAATATCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFPATKF*MNICPK
Trigger: CTTGGGACAGATATTCATCCAGAATTTTGTGGCGGG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCTCCATGGAGGCATGTaGCTCCAACTTCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPLHGGM*LQLHVV
Trigger: CACAACGTGAAGTTGGAGCCACATGCCTCCATGGAG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTCCTCAGACTGTGTTTaGGAATACCCGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSSDCV*EYPLGK
Trigger: CTTCCCCAACGGGTATTCCCAAACACAGTCTGAGGA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGAGGAGAGATTGCCATaGATAGATATGTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFEERLP*IDMSGT
Trigger: TGTGCCAGACATATCTATCCATGGCAATCTCTCCTC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGTAGTTCAATCTGAATaGACCCTTGGGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSVVQSE*TLGWCC
Trigger: GCAGCACCACCCAAGGGTCCATTCAGATTGAACTAC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGTGTGGAGAAAATCATaGACTAACAGTAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLVWRKS*TNSSQS
Trigger: TGACTGGCTACTGTTAGTCCATGATTTTCTCCACAC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTTCTGGAACTACCCCTaGACTCCCACTGTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPFWNYP*TPTVRE
Trigger: CTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCATTGGTCCAATGAATaGGAGCCTTACAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGHWSNE*EPYRKI
Trigger: TATTTTTCTGTAAGGCTCCCATTCATTGGACCAATG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCATTGGTCCAATGAATaGGAGCCTTACAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALHWSNE*EPYRKI
Trigger: TATTTTTCTGTAAGGCTCCCATTCATTGGACCAATG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTCATTGGTCCAATGAATaGGAGCCTTACAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGHWSNE*EPYRKI
Trigger: TATTTTTCTGTAAGGCTCCCATTCATTGGACCAATG...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCAGTCTTCACTACATTaGTCCAATGAATGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFQSSLH*SNEWEP
Trigger: AGGCTCCCATTCATTGGACCAATGTAGTGAAGACTG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTCATGCTCCTCAAACTaGCCTGCAGCATCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSCSSN*PAASVL
Trigger: CAAGACAGATGCTGCAGGCCAGTTTGAGGAGCATGA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGCCCGGCATGCCTTCTaGATGAATCCCCCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYARHAF*MNPPSD
Trigger: ATCGGAAGGGGGATTCATCCAGAAGGCATGCCGGGC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGTTATAGATCAGCCCTaGGCGGTTTCCTTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSVIDQP*AVSLLD
Trigger: ATCCAGCAAGGAAACCGCCCAGGGCTGATCTATAAC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCAGAGTGATAAAAGGTaGCAAGGTGGGTTCGTCCCA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSQSDKR*QGGFVP
Trigger: TGGGACGAACCCACCTTGCCACCTTTTATCACTCTG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCGGCTGAGGGCTTATTaGGATTGTGAGGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPRLRAY*DCEELR
Trigger: CCTCAGTTCCTCACAATCCCAATAAGCCCTCAGCCG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGCCCCAAAAGCTCCATaGAAGTGTCAGGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSAPKAP*KCQDQE
Trigger: TTCTTGGTCCTGACACTTCCATGGAGCTTTTGGGGC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTTGTTCAGGTGGAACTaGCCCCAAAAGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLFRWN*PQKLHG
Trigger: TCCATGGAGCTTTTGGGGCCAGTTCCACCTGAACAA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GCGATGAAGAATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTGCTCCTGTCAGAAATCTGTTATCTaGAGTGCTCTAGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AMKNSSCMLSVSLKSCSCQKSVI*SALVGP
Trigger: TGGACCAACTAGAGCACTCCAGATAACAGATTTCTG...ACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTCTTCATCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGTTCAAGCATGTGACTaGTTGCCAGCTGTGTATAGT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFVQACD*LPAVYS
Trigger: ACTATACACAGCTGGCAACCAGTCACATGCTTGAAC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAGTCTTAGGCATTGCTaGCTGAATATCAGTTTACAA +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGASLRHC*LNISLQ
Trigger: TTGTAAACTGATATTCAGCCAGCAATGCCTAAGACT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTCCTGGAGTTATCTTaGGTGTTCGTCAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLLELS*VFVKSI
Trigger: AATGCTTTTGACGAACACCCAAGATAACTCCAGGAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTTTGCTAACACCACCTaGACTGGATTGACAAATTTT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSFANTT*TGLTNF
Trigger: AAAATTTGTCAATCCAGTTCAGGTGGTGTTAGCAAA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAAAGGCTGGAGTGGCTaGACAATCCATTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPKGWSG*TIHSPS
Trigger: GGAAGGAGAATGGATTGTTCAGCCACTCCAGCCTTT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTACTAGAGAAAGTGAATaGACCTTGAGATCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFTRESE*TLRSSL
Trigger: CAAACTGGATCTCAAGGTTCATTCACTTTCTCTAGT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCTGCCTGGAAACGCTaGGTATGCACATACTGCACA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSAWKR*VCTYCT
Trigger: TGTGCAGTATGTGCATACTCAGCGTTTCCAGGCAGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp ATAATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAACCCGTTGGGGAAGCTaGAGGCACAGATTCCTTATC +
Preference number: 4 (lower is better)
Translates to: IIKLPIILEIIHVAVDLRTRWGS*RHRFLI
Trigger: GATAAGGAATCTGTGCCTTCAGCTTCCCCAACGGGT...TCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCCACTCAGGACAGTATaGATTCTTGGATCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLPLRTV*ILGSCK
Trigger: TTTACAAGATCCAAGAATTCATACTGTCCTGAGTGG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCATTCACCATATCAATaGGGAAGCACATACAGGTGT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFHSPYQ*GSTYRC
Trigger: ACACCTGTATGTGCTTCCTCATTGATATGGTGAATG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCTGTTCTTAGCGGGCTaGAAGATACAGCTGAACACA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLFLAG*KIQLNT
Trigger: TGTGTTCAGCTGTATCTTTCAGCCCGCTAAGAACAG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCTAGTTCTTACACGCTaGAGAAAATTCAGACGGGAA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFLVLTR*RKFRRE
Trigger: TTCCCGTCTGAATTTTCTTCAGCGTGTAAGAACTAG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGGTTCCAGGTGGAATaGGCAATTCTTTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGFQVE*AILYRG
Trigger: CCCTCTGTAAAGAATTGCTCATTCCACCTGGAACCC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGTTTCCTTGCTGGATaGCTTTCAAAGCTCGGACAC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGFLAG*LSKLGH
Trigger: GTGTCCGAGCTTTGAAAGTCATCCAGCAAGGAAACC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGACCTCGGCCTTTCTTaGCATCAATACCAATGTTAT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFDLGLS*HQYQCY
Trigger: ATAACATTGGTATTGATGTCAAGAAAGGCCGAGGTC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTATCTGTGTCACTAAATaGGATCCTATACGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFICVTK*DPIRSS
Trigger: GGAGCTACGTATAGGATCTCATTTAGTGACACAGAT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACAAAAGGAGGAGGTAACTaGTCTGTGTCACTAAATGAG +
Preference number: 4 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTKGGGN*SVSLNE
Trigger: CTCATTTAGTGACACAGATCAGTTACCTCCTCCTTT...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGTCATCCTCCACAGCTaGGAACGCTTTCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYVILHS*ERFPGS
Trigger: GGAACCAGGAAAGCGTTCTCAGCTGTGGAGGATGAC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCTGAGTTCAAGCATGTaGCTGGTTGCCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPLSSSM*LVASCV
Trigger: TACACAGCTGGCAACCAGTCACATGCTTGAACTCAG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCTGGGCCGGTCTCGATaGCCTCATTCTCATTGCTCA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYLGRSR*PHSHCS
Trigger: TGAGCAATGAGAATGAGGTCATCGAGACCGGCCCAG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTGGCTGCATGGTACCTaGTGTACTCCCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYWLHGT*CTPALT
Trigger: AGTCAGAGCGGGAGTACATCAGGTACCATGCAGCCA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTTGTACTTTTCCTCATaGGGATTTACTTTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSLYFSS*GFTFPH
Trigger: ATGAGGGAAAGTAAATCCTCATGAGGAAAAGTACAA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTTCCCAAATAGGTATTaGGAACCCAGGCTACAAGGC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSFPNRY*EPRLQG
Trigger: GCCTTGTAGCCTGGGTTCTCAATACCTATTTGGGAA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTCATTTCTGGGGTGGTaGGGAGAGCAAAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSFLGW*GEQSNS
Trigger: AGAATTGCTTTGCTCTCCTCACCACCCCAGAAATGA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTACCAGGAGCAAACCATaGACAGTTAGGGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSTRSKP*TVRETS
Trigger: TGAAGTCTCCCTAACTGTTCATGGTTTGCTCCTGGT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGCTCAAGTTCTTATGTaGAGCCATCAAAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLAQVLM*SHQKVK
Trigger: TTTGACCTTTTGATGGCTTCACATAAGAACTTGAGC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTGTAGGGAAATCACCTaGAGAGTACTGTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLCREIT*RVLSKF
Trigger: GAATTTAGACAGTACTCTTCAGGTGATTTCCCTACA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTACCTGCCAACTGGGTaGAATTCAAAGAATACAGTT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLYLPTG*NSKNTV
Trigger: AACTGTATTCTTTGAATTGCACCCAGTTGGCAGGTA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTAGTCTGGAAGATGAGTaGTTCTTCACCACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTSLEDE*FFTTGS
Trigger: ACTACCAGTGGTGAAGAAGCACTCATCTTCCAGACT...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATAAACAACCAACTTGCTaGCTTTTTCAATTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: EILYVAPRRVISTRRKKHKQPTC*LFQLAL
Trigger: CAAGGCCAATTGAAAAAGGCAGCAAGTTGGTTGTTT...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTTAAACAACCAACTTaGTGCCTTTTTCAATTGGCC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLKQPT*CLFQLA
Trigger: GGCCAATTGAAAAAGGCAGCAAGTTGGTTGTTTAAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCTAGCTGCCTGCTGTTaGCAGGATACAGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYLAACC*QDTEHG
Trigger: GCCATGCTCTGTATCCTGGCAACAGCAGGCAGCTAG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp ATAATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGATGGCAAACCACAAAGTaGACCCCGTGTGGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: IIKLPIILEIIHVAVDLRWQTTK*TPCGSS
Trigger: TGAGGAACCACACGGGGTGCACTTTGTGGTTTGCCA...TCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGCCTTCCATAGTCACTaGAAAGACCACCCGCACTGG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYAFHSH*KDHPHW
Trigger: CCAGTGCGGGTGGTCTTTGCAGTGACTATGGAAGGC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCACAGGGTAGCAAGTTaGAGATTACCACAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSHRVAS*RLPQLA
Trigger: TGCCAACTGTGGTAATCTGCAACTTGCTACCCTGTG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAGCACTTCCAATTCCTaGTCTGTATCTGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSTSNS*SVSGFF
Trigger: AAAGAATCCAGATACAGAGCAGGAATTGGAAGTGCT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTTCACCACTTGTGGCTaGATGGTACCTGATGTACTC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSFTTCG*MVPDVL
Trigger: GAGTACATCAGGTACCATGCAGCCACAAGTGGTGAA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGTGAGTTTGAAGAGCTaGTCCTGTCCTTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYVSLKS*SCPSAW
Trigger: CCAGGCGGAAGGACAGGAGCAGCTCTTCAAACTCAC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGCTGTGGAGCTACGATaGCTGCCTGTGGCTTTATTA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPAVELR*LPVALL
Trigger: TAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATCATTCACAGCATTTTaGATGGACACATTCTTAATG +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGASFTAF*MDTFLM
Trigger: CATTAAGAATGTGTCCATGCAAAATGCTGTGAATGA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTCATTCACAGCATTTTaGATGGACACATTCTTAATG +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSFTAF*MDTFLM
Trigger: CATTAAGAATGTGTCCATGCAAAATGCTGTGAATGA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCTTCAAAAGAGCAGATaGAAACACAGGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLQKSR*KHRLQD
Trigger: GTCCTGGAGCCTGTGTTTGCATCTGCTCTTTTGAAG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGAGAACACCCAGCACTaGTGCGGCCCAAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYENTQH*CGPKQI
Trigger: AATCTGCTTTGGGCCGCAGCAGTGCTGGGTGTTCTC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTTCATTACGGAGTCTTaGAAACTTCCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPFITES*KLPRCS
Trigger: GGAGCAGCGGGGAAGTTTGCAAGACTCCGTAATGAA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCCTATGGATTTCCACTaGAACCTCAGTGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFPMDFH*NLSVLF
Trigger: GAACAAAACACTGAGGTTGCAGTGGAAATCCATAGG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTATATTTCTCTCTATTTaGCATGCCCACTGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFIFLSI*HAHCPK
Trigger: CTTCGGACAGTGGGCATGGCAAATAGAGAGAAATAT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCTTCCAGTTCATCCATaGATAACGTCAACTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFLPVHP*ITSTPS
Trigger: TGAAGGAGTTGACGTTATCCATGGATGAACTGGAAG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTCTCTACCTGCCAACTaGGTGCAATTCAAAGAATAC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFSLPAN*VQFKEY
Trigger: GTATTCTTTGAATTGCACCCAGTTGGCAGGTAGAGA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTACTGGAAGAGAATTCTaGATGTTTCTTATCTACCAA +
Preference number: 4 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGTGREF*MFLIYQ
Trigger: TTGGTAGATAAGAAACATCCAGAATTCTCTTCCAGT...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCAGTTTGGTGTTCACTaGATCCTGAAGTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSQFGVH*ILKSRL
Trigger: GAGTCTGGACTTCAGGATCCAGTGAACACCAAACTG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTGGACACATTTGCTTTaGCAAGCTCACTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSWTHLL*QAHWWS
Trigger: AGACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGGTGTGCTACTAATTTaGACACATTTGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLGVLLI*THLLWQ
Trigger: TTGCCAAAGCAAATGTGTCCAAATTAGTAGCACACC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTCAGATTATTTGATCTaGAACTTTCTGGGATCAAGA +
Preference number: 4 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFSDYLI*NFLGSR
Trigger: TCTTGATCCCAGAAAGTTCCAGATCAAATAATCTGA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGCCCTTGCTGCTTGGTaGAGGTACTGGGCACAAACT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYALAAW*RYWAQT
Trigger: AGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCATGGATAGATATGTCTaGCACAGTATGACTTATTTC +
Preference number: 4 (lower is better)
Translates to: SLQKSETPKTRPRALIPGMDRYV*HSMTYF
Trigger: GAAATAAGTCATACTGTGCCAGACATATCTATCCAT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAATGGATAGATATGTCTaGCACAGTATGACTTATTTC +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAMDRYV*HSMTYF
Trigger: GAAATAAGTCATACTGTGCCAGACATATCTATCCAT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp ATAATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGACCAGGTGCCTTTCATTaGACACAGGAAGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: IIKLPIILEIIHVAVDLRPGAFH*TQEGKT
Trigger: GGTCTTCCCTTCCTGTGTCCAATGAAAGGCACCTGG...TCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGTGTGGTGGTCAGGGTaGCAAACCACAAAGTGCACC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYVWWSG*QTTKCT
Trigger: GGTGCACTTTGTGGTTTGCCACCCTGACCACCACAC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTTTGTCCACAGACACTaGGCTCACTTGCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYFVHRH*AHLLPA
Trigger: GGCTGGGAGCAAGTGAGCCCAGTGTCTGTGGACAAA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAGCAAACGAATCCCCTaGCATGATAGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSKRIP*HDSRKH
Trigger: GTGCTTCCTGCTATCATGCCAGGGGATTCGTTTGCT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCCAGCTCAATGTTCTaGGATGTATCAGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPSSMF*DVSAVW
Trigger: CCATACAGCTGATACATCCCAGAACATTGAGCTGGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGTTAATCAGCCAATATaGAGCAGAAATGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAVNQPI*SRNEDL
Trigger: AAGATCTTCATTTCTGCTCCATATTGGCTGATTAAC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGTTAATCAGCCAATATaGAGCAGAAATGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALVNQPI*SRNEDL
Trigger: AAGATCTTCATTTCTGCTCCATATTGGCTGATTAAC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCATGCTCCTCAAACTaGCCTGCAGCATCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSCSSN*PAASVL
Trigger: CAAGACAGATGCTGCAGGCCAGTTTGAGGAGCATGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp ATAATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGATCATTCCGAGGCCAGTaGAACACCACACTGGAACCA +
Preference number: 4 (lower is better)
Translates to: IIKLPIILEIIHVAVDLRSFRGQ*NTTLEP
Trigger: TGGTTCCAGTGTGGTGTTCCACTGGCCTCGGAATGA...TCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACACTGAGGAGCCCTCATaGGCCAGCATTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYTEEPS*ASIPVP
Trigger: AGGAACAGGAATGCTGGCCCATGAGGGCTCCTCAGT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTCCAGTCTGCAACAGATaGTATTTGGAGAAACAAACA +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFPVCNR*YLEKQT
Trigger: TGTTTGTTTCTCCAAATACCATCTGTTGCAGACTGG...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAAAAACGGGGCCATCTaGATCTGCAGCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPKNGAI*ICSWVM
Trigger: CATTACCCAGCTGCAGATCCAGATGGCCCCGTTTTT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCTGCATCTTCCATTCTaGCAAACACAGATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFLHLPF*QTQIQS
Trigger: ACTTTGAATCTGTGTTTGTCAGAATGGAAGATGCAG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTTTGCTAACACCACCTaGACTGGATTGACAAATTTT +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFFANTT*TGLTNF
Trigger: AAAATTTGTCAATCCAGTTCAGGTGGTGTTAGCAAA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCTGAACCTGAAGCTCTaGTATACAAAAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLNLKL*YTKGGL
Trigger: CAAGCCACCTTTTGTATATCAGAGCTTCAGGTTCAG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGGGATGGTCTTTACTaGATTCCACCTCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGDGLY*IPPQSP
Trigger: AGGACTTTGAGGTGGAATTCAGTAAAGACCATCCCC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGAATGCAGGGCAATCTaGATAGATAAAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSECRAI*IDKVWG
Trigger: TCCCCAGACTTTATCTATTCAGATTGCCCTGCATTC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGCAGAGGTGGGCCTTTaGTACAACTGGAAGACATTA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPAEVGL*YNWKTL
Trigger: TAATGTCTTCCAGTTGTATCAAAGGCCCACCTCTGC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTACCAAGAATATGTTaGTGTGGACTAAGGAATCAT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLPRIC*CGLRNH
Trigger: ATGATTCCTTAGTCCACATCAACATATTCTTGGTAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGTGTTCACTGGATCCTaGAGTCCAGACTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYVFTGS*SPDSME
Trigger: CTCCATGGAGTCTGGACTTCAGGATCCAGTGAACAC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGATGTCTGGCACAGTATaGCTTATTTCTTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLMSGTV*LISLSK
Trigger: TTTGGACAAAGAAATAAGTCATACTGTGCCAGACAT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACACAATGTCTGGCACAGTATaGCTTATTTCTTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: DFKASRPNTIGNVHQSDTMSGTV*LISLSK
Trigger: TTTGGACAAAGAAATAAGTCATACTGTGCCAGACAT...TGTGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGCTGAAAGATACAGCTaGACACATTCGTCATGCCAG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPAERYS*THSSCQ
Trigger: CTGGCATGACGAATGTGTTCAGCTGTATCTTTCAGC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCTGTTCTTAGCGGGCTaGAAGATACAGCTGAACACA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPLFLAG*KIQLNT
Trigger: TGTGTTCAGCTGTATCTTTCAGCCCGCTAAGAACAG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAGGACACATCTTCAATaGCCACAAACTCCGTACCTG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPRTHLQ*PQTPYL
Trigger: CAGGTACGGAGTTTGTGGTCATTGAAGATGTGTCCT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGCCAAACAAACTTCCTaGAAAGGGGCGATCAACAAA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSAKQTS*KGAINK
Trigger: TTTGTTGATCGCCCCTTTTCAGGAAGTTTGTTTGGC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAGGTATCCCTCATGTTaGTATGGAAGGAATTATTCT +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLRYPSC*YGRNYS
Trigger: AGAATAATTCCTTCCATATCAACATGAGGGATACCT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGGCTTATTGGGATTGTaGGGAACTGAGGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYGLLGL*GTEEPS
Trigger: TGAGGGCTCCTCAGTTCCTCACAATCCCAATAAGCC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGAAACTTAGCAGCTTaGGGAGCAGTTTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSRNLAA*GAVSPQ
Trigger: TTGAGGAGAAACTGCTCCTCAAGCTGCTAAGTTTCT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTCAGTGTTCAGGTTATTaGCATATTTTCCCAAATAGG +
Preference number: 4 (lower is better)
Translates to: VIEGSLTHTINPSESLIFQCSGY*HIFPNR
Trigger: CCTATTTGGGAAAATATGTCAATAACCTGAACACTG...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCGCTCTAACTGTAGGTaGACGTTGAACTTCTCTACC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPRSNCR*TLNFST
Trigger: GGTAGAGAAGTTCAACGTTCACCTACAGTTAGAGCG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGTCTGGAAGATGAGTaGTTCTTCACCACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSLEDE*FFTTGS
Trigger: ACTACCAGTGGTGAAGAAGCACTCATCTTCCAGACT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTACTACTATCCTCTGGTaGCTTCGAGTATTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPTTILW*LRVFSR
Trigger: CCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAAACAACCAACTTGCTaGCTTTTTCAATTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFKQPTC*LFQLAL
Trigger: CAAGGCCAATTGAAAAAGGCAGCAAGTTGGTTGTTT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACATGGAGACGACTAGCTaGCTGCTGTTGCCAGGATAC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYMETTS*LLLPGY
Trigger: GTATCCTGGCAACAGCAGGCAGCTAGTCGTCTCCAT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTAGGAGATATATGGTATaGCCAGGCTGTCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTRRYMV*PGCLKI
Trigger: GATTTTCAGACAGCCTGGGCATACCATATATCTCCT...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAGCTGTATGGAGAGCTaGCTCCTTGCCAGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSCMES*LLARFQ
Trigger: CTGAAACCTGGCAAGGAGGCAGCTCTCCATACAGCT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAGCACTTCCAATTCCTaGTCTGTATCTGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFSTSNS*SVSGFF
Trigger: AAAGAATCCAGATACAGAGCAGGAATTGGAAGTGCT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTATTGGTGTTCCACCTTaGTCAGCTGTCTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSIGVPP*SAVFSW
Trigger: CCATGAAAAGACAGCTGAGCAAGGTGGAACACCAAT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTTCACCACTTGTGGCTaGATGGTACCTGATGTACTC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPFTTCG*MVPDVL
Trigger: GAGTACATCAGGTACCATGCAGCCACAAGTGGTGAA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCCGCCACAAAATTCTaGATGAATATCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPATKF*MNICPK
Trigger: CTTGGGACAGATATTCATCCAGAATTTTGTGGCGGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCAGGATATTCCACATTaGACACTGAGGGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPQDIPH*TLRGKT
Trigger: AGTCTTGCCCCTCAGTGTCCAATGTGGAATATCCTG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTTCCAACAAGTATCTTaGGCTCATCCACTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSFQQVS*AHPLLE
Trigger: CTCCAACAGTGGATGAGCCCAAGATACTTGTTGGAA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGAAGTCCAGACTCCATaGAGGCATGTGGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYEVQTP*RHVAPT
Trigger: AGTTGGAGCCACATGCCTCCATGGAGTCTGGACTTC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTGGCAAGCTCACTGGTaGTCTTATTCAGCACTAGAG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPWQAHW*SYSALE
Trigger: CTCTAGTGCTGAATAAGACCACCAGTGAGCTTGCCA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCTTTGGCAAGCTCACTaGTGGTCTTATTCAGCACTA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLWQAH*WSYSAL
Trigger: TAGTGCTGAATAAGACCACCAGTGAGCTTGCCAAAG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCCAGCAGGCAGACATaGTCTTCTGGACTACTGGAC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSSRQT*SSGLLD
Trigger: GTCCAGTAGTCCAGAAGACCATGTCTGCCTGCTGGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCATGGATAGATATGTCTaGCACAGTATGACTTATTTC +
Preference number: 4 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSMDRYV*HSMTYF
Trigger: GAAATAAGTCATACTGTGCCAGACATATCTATCCAT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp ATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGAGAGGAGAGATTGCCATaGATAGATATGTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: IKLPIILEIIHVAVDLRGEERLP*IDMSGT
Trigger: TGTGCCAGACATATCTATCCATGGCAATCTCTCCTC...TCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp ATAATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGTAGTTCAATCTGAATaGACCCTTGGGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IIKLPIILEIIHVAVDLRVVQSE*TLGWCC
Trigger: GCAGCACCACCCAAGGGTCCATTCAGATTGAACTAC...TCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTATATCACTGGGAGTGTaGAGAAAATCATGGACTAAC +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFISLGV*RKSWTN
Trigger: GTTAGTCCATGATTTTCTCCACACTCCCAGTGATAT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACAATATCACTGGGAGTGTaGAGAAAATCATGGACTAAC +
Preference number: 4 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTISLGV*RKSWTN
Trigger: GTTAGTCCATGATTTTCTCCACACTCCCAGTGATAT...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACGGATGGATTTTGCAATaGCAAGAAACAGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNGWILQ*QETAEH
Trigger: ATGTTCAGCTGTTTCTTGCCATTGCAAAATCCATCC...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCCATCCACGATTCCTTaGTACTTACATACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTPSTIP*YLHTGQ
Trigger: TTGACCAGTATGTAAGTACCAAGGAATCGTGGATGG...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCCCAGCTCAATGTTCTaGGATGTATCAGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPPSSMF*DVSAVW
Trigger: CCATACAGCTGATACATCCCAGAACATTGAGCTGGG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTGGAACCAGGAAGGGTaGAAATGTAACCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPWNQEG*KCNLRD
Trigger: ATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCATTCCGAGGCCAGTaGAACACCACACTGGAACCA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSFRGQ*NTTLEP
Trigger: TGGTTCCAGTGTGGTGTTCCACTGGCCTCGGAATGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCAGCAATATCTAAGATaGCAGACCCCTCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYQQYLR*QTPRWS
Trigger: GCTCCACCGAGGGGTCTGCCATCTTAGATATTGCTG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTGTCTTGGAAGGATTTaGGTCATGAGTTATAAACAC +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLCLGRI*VMSYKH
Trigger: GTGTTTATAACTCATGACCCAAATCCTTCCAAGACA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCGGCTCCTGGATATTTaGGATCTGAAGTATAAATCA +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFRLLDI*DLKYKS
Trigger: TGATTTATACTTCAGATCCCAAATATCCAGGAGCCG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGCTCCATCAGTTAAGTaGGCCACATTCGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYAPSVK*ATFGPE
Trigger: CTCTGGACCGAATGTGGCCCACTTAACTGATGGAGC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAAACGTGCTACCCATTaGGACATTAACTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPKRATH*DINFGA
Trigger: GGCACCAAAGTTAATGTCTCAATGGGTAGCACGTTT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCACAAAATTCTGGATaGATATCTGTCCCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPQNSG*ISVPSV
Trigger: GACACTTGGGACAGATATTCATCCAGAATTTTGTGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGAATGCAGGGCAATCTaGATAGATAAAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPECRAI*IDKVWG
Trigger: TCCCCAGACTTTATCTATTCAGATTGCCCTGCATTC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACCTACCAAGAATATGTTaGTGTGGACTAAGGAATCAT +
Preference number: 4 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNLPRIC*CGLRNH
Trigger: ATGATTCCTTAGTCCACATCAACATATTCTTGGTAG...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp ATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACATTCACCATATCAATaGGGAAGCACATACAGGTGT +
Preference number: 4 (lower is better)
Translates to: IKLPIILEIIHVAVDLRGHSPYQ*GSTYRC
Trigger: ACACCTGTATGTGCTTCCTCATTGATATGGTGAATG...TCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGCAGTTTGCATTTCTTaGAGTCAAATCTGGCTAGGG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPAVCIS*SQIWLG
Trigger: CCCTAGCCAGATTTGACTTCAAGAAATGCAAACTGC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp ATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACTAGTTCTTACACGCTaGAGAAAATTCAGACGGGAA +
Preference number: 4 (lower is better)
Translates to: IKLPIILEIIHVAVDLRGLVLTR*RKFRRE
Trigger: TTCCCGTCTGAATTTTCTTCAGCGTGTAAGAACTAG...TCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAATCTCCAGAAAGGGTaGAGTGGGCATAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYNLQKG*SGHSLQ
Trigger: CTGAAGGCTATGCCCACTTCACCCTTTCTGGAGATT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGGGGAAATTCTCCAGTaGTACCCCCAGCTCAATGTT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYGEILQ*YPQLNV
Trigger: AACATTGAGCTGGGGGTATCACTGGAGAATTTCCCC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGGGTTCCAGGTGGAATaGGCAATTCTTTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYGFQVE*AILYRG
Trigger: CCCTCTGTAAAGAATTGCTCATTCCACCTGGAACCC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGCAGCTCTTGTTCGGTaGCAGGAAGTTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYAALVR*QEVHPL
Trigger: AAGTGGATGAACTTCCTGTCACCGAACAAGAGCTGC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCTTGGCAGCAGAGTTTaGTACTCCGTGTGTAACATT +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPLGSRV*YSVCNI
Trigger: AATGTTACACACGGAGTATCAAACTCTGCTGCCAAG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCAAATCTTGGTTCCATaGAAAACTTACCAACGCAGC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSQILVP*KTYQRS
Trigger: GCTGCGTTGGTAAGTTTTTCATGGAACCAAGATTTG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGGCCTCTTCACAAAGTaGGCATTGGTACCAAACACC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYGLFTK*ALVPNT
Trigger: GGTGTTTGGTACCAATGCTCACTTTGTGAAGAGGCC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTACTGCAGCATTAGCTTaGTCTGGGATGGATTTTGCA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPTAALA*SGMDFA
Trigger: TGCAAAATCCATCCCAGAGCAAGCTAATGCTGCAGT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCTTAAACAACCAACTTaGTGCCTTTTTCAATTGGCC +
Preference number: 4 (lower is better)
Translates to: SVSLNEILYVAPRRVISTLKQPT*CLFQLA
Trigger: GGCCAATTGAAAAAGGCAGCAAGTTGGTTGTTTAAG...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGATCTCAGAGGACCCTaGCCCTTTAACAGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYDLRGP*PFNSQS
Trigger: ACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTGCCATCTTGTGCAGTaGGTGAGTGCTGAGACAATC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYCHLVQ*VSAETI
Trigger: GATTGTCTCAGCACTCACGCACTGCACAAGATGGCA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAGTCCTAAAATGTCATaGACCCCAGTCTGCAACAGA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSPKMS*TPVCNR
Trigger: TCTGTTGCAGACTGGGGTGCATGACATTTTAGGACT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR GCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCTATGGATTTCCACTaGAACCTCAGTGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPMDFH*NLSVLF
Trigger: GAACAAAACACTGAGGTTGCAGTGGAAATCCATAGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTTCCAACAAGTATCTTaGGCTCATCCACTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPFQQVS*AHPLLE
Trigger: CTCCAACAGTGGATGAGCCCAAGATACTTGTTGGAA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTCAGATTATTTGATCTaGAACTTTCTGGGATCAAGA +
Preference number: 4 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSDYLI*NFLGSR
Trigger: TCTTGATCCCAGAAAGTTCCAGATCAAATAATCTGA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGTGTGGAGAAAATCATaGACTAACAGTAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSVWRKS*TNSSQS
Trigger: TGACTGGCTACTGTTAGTCCATGATTTTCTCCACAC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTATCCAAACGAGGTTTaGCCTTGGCTTCTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPYPNEV*PWLLAS
Trigger: TGAAGCTAGAAGCCAAGGCCAAACCTCGTTTGGATA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGCTTTGTCCAAAACATaGAGGATCCACCGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYALSKT*RIHRRA
Trigger: GGCTCTTCGGTGGATCCTCCATGTTTTGGACAAAGC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000011700.10
ENST00000620676.6
CDS-3UTR CCA 90 bp ATAATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGACCCAGCTCAATGTTCTaGGATGTATCAGCTGTATGG +
Preference number: 4 (lower is better)
Translates to: IIKLPIILEIIHVAVDLRPSSMF*DVSAVW
Trigger: CCATACAGCTGATACATCCCAGAACATTGAGCTGGG...TCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGTTATAGATCAGCCCTaGGCGGTTTCCTTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYVIDQP*AVSLLD
Trigger: ATCCAGCAAGGAAACCGCCCAGGGCTGATCTATAAC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCTGGAGTGCTCTAGTTaGTCCATCTGGGATGACTCT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYLECSS*SIWDDS
Trigger: AGAGTCATCCCAGATGGACCAACTAGAGCACTCCAG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGTGTCTCTCACCGCCTaGGCTGTTTCTGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYVSLTA*AVSDAK
Trigger: TTTTGCATCAGAAACAGCCCAGGCGGTGAGAGACAC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAGTGCAACTGAGAGCTaGTCAGTGTTCAGGTTATTG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSATES*SVFRLL
Trigger: CAATAACCTGAACACTGACCAGCTCTCAGTTGCACT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAACAACACAATGCTCTaGGTTAAATTCATTACGGAG +
Preference number: 4 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFNNTML*VKFITE
Trigger: CTCCGTAATGAATTTAACCCAGAGCATTGTGTTGTT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGTAAGTTCAGCCTATaGATTTCCACTGCAACCTCA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSKFSL*ISTATS
Trigger: TGAGGTTGCAGTGGAAATCCATAGGCTGAACTTACT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAACTCAAAGCTTCAGTaGGGGCTGCATCTTCCATTC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYNSKLQ*GLHLPF
Trigger: GAATGGAAGATGCAGCCCTCACTGAAGCTTTGAGTT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTTTACAGTGTCCAAATaGGACGAAGCTAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPFTVSK*DEARSN
Trigger: GTTTGACCTAGCTTCGTCTCATTTGGACACTGTAAA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCACTCAGGACAGTATaGATTCTTGGATCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPLRTV*ILGSCK
Trigger: TTTACAAGATCCAAGAATTCATACTGTCCTGAGTGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGCTGAAAGATACAGCTaGACACATTCGTCATGCCAG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYAERYS*THSSCQ
Trigger: CTGGCATGACGAATGTGTTCAGCTGTATCTTTCAGC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGTAGCCAGTCAAATATaGGAAACACACGGAGATTGT +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPVASQI*ETHGDC
Trigger: ACAATCTCCGTGTGTTTCTCATATTTGACTGGCTAC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGGAAATCTTCACTATTaGATGCATCCATCAATCCTG +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSGNLHY*MHPSIL
Trigger: CAGGATTGATGGATGCATTCAATAGTGAAGATTTCC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTTTTTCAATTGGCCTTaGCACGCCAAAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPFFNWP*HAKRAL
Trigger: CAAAGCTCTTTTGGCGTGTCAAGGCCAATTGAAAAA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATCTGTGTCACTAAATaGGATCCTATACGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPICVTK*DPIRSS
Trigger: GGAGCTACGTATAGGATCTCATTTAGTGACACAGAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCTTTGTGTCTTGGGTaGGACATCCAAAACGAGCTC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSLCLG*DIQNEL
Trigger: GAGCTCGTTTTGGATGTCTCACCCAAGACACAAAGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACATCTTGTGCAGTGCGTaGGTGCTGAGACAATCATCA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYILCSA*VLRQSS
Trigger: TGATGATTGTCTCAGCACTCACGCACTGCACAAGAT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATGATGACTCTGATATaGGAACCAGACTCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPMMTLI*EPDSRV
Trigger: GACTCTTGAGTCTGGTTCTCATATCAGAGTCATCAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCGAACCCTCTGTGCTTaGGTCCTAAAATGTCATGCA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYRTLCA*VLKCHA
Trigger: TGCATGACATTTTAGGACTCAAGCACAGAGGGTTCG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCTGATAACCAAAACCTaGGGTATGAACCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPLITKT*GMNLSL
Trigger: AAGGGAAAGGTTCATACCTCAGGTTTTGGTTATCAG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCTCGGATGTCTCTCTaGAGCAAAGATGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSRMSL*SKDVHV
Trigger: GACATGGACATCTTTGCTGCAGAGAGACATCCGAGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCACAGGGTAGCAAGTTaGAGATTACCACAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYHRVAS*RLPQLA
Trigger: TGCCAACTGTGGTAATCTGCAACTTGCTACCCTGTG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCTGTTGTCAGTCACTaGAGCGAGACCAGCAATATC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSVVSH*SETSNI
Trigger: GATATTGCTGGTCTCGCTGCAGTGACTGACAACAGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATATTTCTCTCTATTTaGCATGCCCACTGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPIFLSI*HAHCPK
Trigger: CTTCGGACAGTGGGCATGGCAAATAGAGAGAAATAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGATAAAGTCTGGGGATaGTCTTTACTGAATTCCACC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPDKVWG*SLLNST
Trigger: GGTGGAATTCAGTAAAGACCATCCCCAGACTTTATC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACATCAGATTATTTGATCTaGAACTTTCTGGGATCAAGA +
Preference number: 4 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTSDYLI*NFLGSR
Trigger: TCTTGATCCCAGAAAGTTCCAGATCAAATAATCTGA...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp ATAATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAAGCATTAGCTTGCTCTaGGATGGATTTTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: IIKLPIILEIIHVAVDLRSISLL*DGFCNG
Trigger: GCCATTGCAAAATCCATCCCAGAGCAAGCTAATGCT...TCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACATTTGTTCTGCTGCTTaGGCTGCCAATCGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYICSAA*AANRRG
Trigger: TCCTCTACGATTGGCAGCCCAAGCAGCAGAACAAAT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGTTTTGGGTTCCAGGTaGAATGAGCAATTCTTTACA +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSVLGSR*NEQFFT
Trigger: TGTAAAGAATTGCTCATTCCACCTGGAACCCAAAAC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAAAGTAGTATCGAATTaGTGTTCCACCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPKVVSN*CSTLLS
Trigger: GCTGAGCAAGGTGGAACACCAATTCGATACTACTTT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATGTTCCAGCAAACTTaGCAGCAGAGTTTGATACTC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPMFQQT*QQSLIL
Trigger: GAGTATCAAACTCTGCTGCCAAGTTTGCTGGAACAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAAACGTGCTACCCATTaGGACATTAACTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYKRATH*DINFGA
Trigger: GGCACCAAAGTTAATGTCTCAATGGGTAGCACGTTT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTTTGCTAACACCACCTaGACTGGATTGACAAATTTT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSFANTT*TGLTNF
Trigger: AAAATTTGTCAATCCAGTTCAGGTGGTGTTAGCAAA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAAATGGCTCCCAGCCTaGAAGAGCACGGTTATAATA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYKWLPA*KSTVII
Trigger: TATTATAACCGTGCTCTTTCAGGCTGGGAGCCATTT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGGTATCCCTCATGTTaGTATGGAAGGAATTATTCT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSRYPSC*YGRNYS
Trigger: AGAATAATTCCTTCCATATCAACATGAGGGATACCT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGTAGTTTATTTCTTGTaGCAACTTGACAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPVVYFL*QLDSKD
Trigger: GTCCTTGCTGTCAAGTTGTCACAAGAAATAAACTAC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTTGTACTTTTCCTCATaGGGATTTACTTTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLYFSS*GFTFPH
Trigger: ATGAGGGAAAGTAAATCCTCATGAGGAAAAGTACAA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCTTTTAAGAGATCATaGTCTCAGGCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSFKRS*SQAVGY
Trigger: GTAACCTACTGCCTGAGATCATGATCTCTTAAAAGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGCACTTTCATTCATTTaGGGAGTTCCTTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYALSFI*GVPCSL
Trigger: CAAGGAGCAAGGAACTCCTCAAATGAATGAAAGTGC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGGTGCCACCTATACTTaGAGTTGCAATTTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYGATYT*SCNFSA
Trigger: GGCAGAAAAATTGCAACTGCAAGTATAGGTGGCACC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGATTCTTTAATTTCTaGAGCTCTTGTTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGFFNF*SSCSVT
Trigger: TGTCACCGAACAAGAGCTGCAGAAATTAAAGAATCC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGTGCAACGTTTCCTCTaGTCTCTGATCTCATACAAG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYVQRFL*SLISYK
Trigger: CTTGTATGAGATCAGAGAGCAGAGGAAACGTTGCAC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCTGAAAACTCGAGCTaGATGAAAGCACTTTCATTC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSENSS*MKALSF
Trigger: GAATGAAAGTGCTTTCATGCAGCTCGAGTTTTCAGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATATCACTGGGAGTGTaGAGAAAATCATGGACTAAC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPISLGV*RKSWTN
Trigger: GTTAGTCCATGATTTTCTCCACACTCCCAGTGATAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTATCCAAACGAGGTTTaGCCTTGGCTTCTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYYPNEV*PWLLAS
Trigger: TGAAGCTAGAAGCCAAGGCCAAACCTCGTTTGGATA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCTTTCTCAGCATCAGTaGCTCGTATCTGTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYLSQHQ*LVSVVS
Trigger: ACTGACAACAGATACGAGCCACTGATGCTGAGAAAG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCTCAACCCACTTTACTaGGAATACTTTAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPLNPLY*EYFSLQ
Trigger: TTGGAGACTAAAGTATTCCCAGTAAAGTGGGTTGAG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCATTCACCATATCAATaGGGAAGCACATACAGGTGT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYHSPYQ*GSTYRC
Trigger: ACACCTGTATGTGCTTCCTCATTGATATGGTGAATG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCTAGTTCTTACACGCTaGAGAAAATTCAGACGGGAA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYLVLTR*RKFRRE
Trigger: TTCCCGTCTGAATTTTCTTCAGCGTGTAAGAACTAG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGACCTCGGCCTTTCTTaGCATCAATACCAATGTTAT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYDLGLS*HQYQCY
Trigger: ATAACATTGGTATTGATGTCAAGAAAGGCCGAGGTC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCAAATCTTGGTTCCATaGAAAACTTACCAACGCAGC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYQILVP*KTYQRS
Trigger: GCTGCGTTGGTAAGTTTTTCATGGAACCAAGATTTG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGTTTACTCTCCTCAATaGAATCACCCACTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYVYSPQ*NHPLAN
Trigger: GTTTGCTAGTGGGTGATTTCATTGAGGAGAGTAAAC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAGGGTTTGTAAAACCTaGTCATATACATGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPRVCKT*SYTCFA
Trigger: AGCAAAGCATGTATATGAGCAGGTTTTACAAACCCT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGCCAAGTTTCCATTCTaGAATCCACTAACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYAKFPF*NPLTWS
Trigger: ACTCCAAGTTAGTGGATTGCAGAATGGAAACTTGGC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGCTCCAACAACACAATaGTCTGGGTTAAATTCATTA +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPAPTTQ*SGLNSL
Trigger: TAATGAATTTAACCCAGAGCATTGTGTTGTTGGAGC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCTTCCAGTTCATCCATaGATAACGTCAACTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYLPVHP*ITSTPS
Trigger: TGAAGGAGTTGACGTTATCCATGGATGAACTGGAAG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGTTAATCAGCCAATATaGAGCAGAAATGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSVNQPI*SRNEDL
Trigger: AAGATCTTCATTTCTGCTCCATATTGGCTGATTAAC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCAGAAATCTGTTATCTaGAGTGCTCTAGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYQKSVI*SALVGP
Trigger: TGGACCAACTAGAGCACTCCAGATAACAGATTTCTG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTGTCTTGGAAGGATTTaGGTCATGAGTTATAAACAC +
Preference number: 4 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPCLGRI*VMSYKH
Trigger: GTGTTTATAACTCATGACCCAAATCCTTCCAAGACA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACACTAGAGAAAGTGAATaGACCTTGAGATCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYTRESE*TLRSSL
Trigger: CAAACTGGATCTCAAGGTTCATTCACTTTCTCTAGT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAGAGGTCATCGTATTTaGCTTCTAGGAAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYRGHRI*LLGKWL
Trigger: AAGCCATTTTCCTAGAAGTCAAATACGATGACCTCT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGAAGGATTTGGGTCATaGGTTATAAACACCAAAACC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYEGFGS*VINTKT
Trigger: GGTTTTGGTGTTTATAACTCATGACCCAAATCCTTC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR TCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCTTTTAAGAGATCATaGTCTCAGGCAGTAGGTTAC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSFKRS*SQAVGY
Trigger: GTAACCTACTGCCTGAGATCATGATCTCTTAAAAGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGGATTCTTTAATTTCTaGAGCTCTTGTTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYGFFNF*SSCSVT
Trigger: TGTCACCGAACAAGAGCTGCAGAAATTAAAGAATCC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCCCTTCTCCCTATCTaGTTAATCCTTACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSLLPI*LILTEK
Trigger: CTTTTCTGTAAGGATTAAGCAGATAGGGAGAAGGGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGGATGGATTTTGCAATaGCAAGAAACAGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYGWILQ*QETAEH
Trigger: ATGTTCAGCTGTTTCTTGCCATTGCAAAATCCATCC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCGGCTCCTGGATATTTaGGATCTGAAGTATAAATCA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYRLLDI*DLKYKS
Trigger: TGATTTATACTTCAGATCCCAAATATCCAGGAGCCG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR GCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACATTTCTGCCTTGGTCTaGATCTTCAGCTTGTTATAT +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYISALV*IFSLLY
Trigger: ATATAACAAGCTGAAGATGCAGACCAAGGCAGAAAT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTGTCTTGGAAGGATTTaGGTCATGAGTTATAAACAC +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYCLGRI*VMSYKH
Trigger: GTGTTTATAACTCATGACCCAAATCCTTCCAAGACA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
3UTR CAA 72 bp ATTTTTAGAATTTTATCAAGCAGCTACTATGGTATTTaGAGGCCCAGATCATACTTACAAACAAAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: IFRILSSSYYGI*RPRSYLQTKWP
Trigger: GGGCCACTTTGTTTGTAAGTATGATCTGGGCCTCAAAATACCATAGTAGCTGCTTGATAAAATTCTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CCA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACACTGGAAGAGAATTCTaGATGTTTCTTATCTACCAA +
Preference number: 4 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYTGREF*MFLIYQ
Trigger: TTGGTAGATAAGAAACATCCAGAATTCTCTTCCAGT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp CTCCATCGTCAGCTGAGAGCTGGGCCTCTTTCCTCCTGGTGGGTCTaGGCTGTGTCGGGAGCGCCCATCTCAGCAGCGGGGCTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: LHRQLRAGPLSSWWV*AVSGAPISAAGLQE
Trigger: CTCCTGAAGCCCCGCTGCTGAGATGGGCGCTCCCGACACAGCGCAGACCCACCAGGAGGAAAGAGGCCCAGCTCTCAGCTGACGATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGCGCCTGCCACTGGCTaGGTTACAGTGCCAACAAGC +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGAPATG*VTVPTS
Trigger: GCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp CCAGGACTGGAGATACTGCAGCATCCCACTGCCTCCACCGGGTTCTaGGGCTCCCGGACAGGCTCCTGGAGAATCAAACTGAGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: PGLEILQHPTASTGF*GSRTGSWRIKLRLP
Trigger: CGGGAGCCTCAGTTTGATTCTCCAGGAGCCTGTCCGGGAGCCCCAGAACCCGGTGGAGGCAGTGGGATGCTGCAGTATCTCCAGTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp ACAGCCAGGCACTCACCATGGGCTTCTGGTGGGAGGGGCCGGGGATaGACACTCCACTGCTCGTGCTCACGGCTTTCTTGGTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: TARHSPWASGGRGRG*TLHCSCSRLSWSPA
Trigger: TGCAGGTGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCCCCGGCCCCTCCCACCAGAAGCCCATGGTGAGTGCCTGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647414.1
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGGCCTTGTGCTGACATaGAGCCGCCTCTCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGGLVLT*SRLSKW
Trigger: CCACTTTGAGAGGCGGCTCAATGTCAGCACAAGGCC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp GCAGACCCCTCGGTGGAGCGGGCGGCTGAGGGCTTATTGGGATTGTaGGGAACTGAGGAGCCCTCATGGGCCAGCATTCCTGTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: ADPSVERAAEGLLGL*GTEEPSWASIPVPV
Trigger: GACAGGAACAGGAATGCTGGCCCATGAGGGCTCCTCAGTTCCTCACAATCCCAATAAGCCCTCAGCCGCCCGCTCCACCGAGGGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS CCA 90 bp GTGGGTGTGGTGGTCAGGGTGGCAAACCACAAAGTGCACCCCGTGTaGTTCCTCAGAGCAAAGGGGACAAATGGCTGCCGGCGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: VGVVVRVANHKVHPV*FLRAKGTNGCRRLG
Trigger: CCCCAAGCGCCGGCAGCCATTTGTCCCCTTTGCTCTGAGGAACCACACGGGGTGCACTTTGTGGTTTGCCACCCTGACCACCACACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS-3UTR CAA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTGGAGAGCTGCCTCCTaGCCAGGTTTCAGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: LCMHARARTHTHTHTHTQWRAAS*PGFSVP
Trigger: TGGGACGCTGAAACCTGGCAAGGAGGCAGCTCTCCA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCCGAACCCTCTGTGCTaGAGTCCTGGGGCCGCTGAG +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHPNPLC*SPGAAE
Trigger: CTCAGCGGCCCCAGGACTCAAGCACAGAGGGTTCGG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGTGCTCACGGCTTTCTaGGTCACCTGCACATACACC +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGVLTAF*VTCTYT
Trigger: GGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCAC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAACAGTCCCGGGGCTTaGTTCTTGGTTGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGNSPGA*FLVVAA
Trigger: GGCAGCAACAACCAAGAACAAAGCCCCGGGACTGTT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp TCACCATGGGCTTCTGGTGGGAGGGGCCGGGGATGGACACTCCACTaGTCGTGCTCACGGCTTTCTTGGTCACCTGCACATACACCTTCC +
Preference number: 5 (lower is better)
Translates to: SPWASGGRGRGWTLH*SCSRLSWSPAHTPS
Trigger: GGAAGGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCACGAGCAGTGGAGTGTCCATCCCCGGCCCCTCCCACCAGAAGCCCATGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647414.1
CDS CCA 90 bp CCGAACCCTCTGTGCTTGAGTCCTCTGCCACCGATGCGGCCTCCTTaGAGACAGGCAGGTTTCCTGTGGTGTCAGCCCTGTTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PNPLCLSPLPPMRPP*RQAGFLWCQPCFLQ
Trigger: CTGGAGGAAACAGGGCTGACACCACAGGAAACCTGCCTGTCTCCAAGGAGGCCGCATCGGTGGCAGAGGACTCAAGCACAGAGGGTTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645148.1
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCAGGAGGCAGCCTCATaGCGTGGTTGTCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLQEAAS*RGCLQW
Trigger: CCACTGCAGACAACCACGCAATGAGGCTGCCTCCTG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGACAAGGGGGAGGCTTaGTCCAAAACATGGAGGATC +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGDKGEA*SKTWRI
Trigger: GATCCTCCATGTTTTGGACAAAGCCTCCCCCTTGTC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGAATACACCCAATCCTTaGGGCCGGGCCTGTAGCCGC +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLNTPNP*GRACSR
Trigger: GCGGCTACAGGCCCGGCCCAAAGGATTGGGTGTATT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCCGGGGCTTTGTTCTaGGTTGTTGCTGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLPGALF*VVAAQA
Trigger: TGCCTGGGCAGCAACAACCAAGAACAAAGCCCCGGG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp GCACACACTCTCAGCTTTGATCTCCACGCCAGAGATCAATGGCGCTaGCACAGCCCCTGGGCTATCTCGGCTGGTGGAGGCCAAGGAAAG +
Preference number: 5 (lower is better)
Translates to: AHTLSFDLHARDQWR*HSPWAISAGGGQGK
Trigger: CTTTCCTTGGCCTCCACCAGCCGAGATAGCCCAGGGGCTGTGGCAGCGCCATTGATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp GCTCCAGGACGTAGTGATGGCTGCGACTCTCCATGCTCCTGGCCATaGCCTCCTGTGTGTCACAAGAACACCTGCTCTGCTCCGAATGGC +
Preference number: 5 (lower is better)
Translates to: APGRSDGCDSPCSWP*PPVCHKNTCSAPNG
Trigger: GCCATTCGGAGCAGAGCAGGTGTTCTTGTGACACACAGGAGGCCATGGCCAGGAGCATGGAGAGTCGCAGCCATCACTACGTCCTGGAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489961.1
CDS CCA 90 bp ACACAGGCTCCAGGACGTAGTGATGGCTGCGACTCTCCATGCTCCTaGCCATGGCCTCCTGTGTGTCACAAGAACACCTGCTCTGCTCCG +
Preference number: 5 (lower is better)
Translates to: TQAPGRSDGCDSPCS*PWPPVCHKNTCSAP
Trigger: CGGAGCAGAGCAGGTGTTCTTGTGACACACAGGAGGCCATGGCCAGGAGCATGGAGAGTCGCAGCCATCACTACGTCCTGGAGCCTGTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489961.1
CDS-3UTR CAA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGGGCTCCAACTTCACGTaGTGCAGAATGCCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LCMHARARTHTHTHTHTQGSNFT*CRMPSG
Trigger: TCCTGAGGGCATTCTGCACAACGTGAAGTTGGAGCC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGCACGCCAAAAGAGCTTaGCGACAATCATCCATGCTG +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGHAKRA*RQSSML
Trigger: CAGCATGGATGATTGTCGCAAAGCTCTTTTGGCGTG...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTGGAGAGCTGCCTCCTaGCCAGGTTTCAGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHWRAAS*PGFSVP
Trigger: TGGGACGCTGAAACCTGGCAAGGAGGCAGCTCTCCA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CCATGGATGCCGGCTACAAGGTGTTCACCACTTGTGGCTGCATGGTACCTGATGCCGAACCCTCTGTGCTaGAGTCCTGGGGCCGCTGAG +
Preference number: 5 (lower is better)
Translates to: PWMPATRCSPLVAAWYLMPNPLC*SPGAAE
Trigger: CTCAGCGGCCCCAGGACTCAAGCACAGAGGGTTCGG...CATCAGGTACCATGCAGCCACAAGTGGTGAACACCTTGTAGCCGGCATCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGATTCATTACGGAGTCTaGCAAACTTCCCCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGIHYGV*QTSPLL
Trigger: GAGCAGCGGGGAAGTTTGCAAGACTCCGTAATGAAT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp ACTCACTCTTCAGGCTTCCTAGGCTCATTCCAGCAAGAGGCATCGTaGACTGCCCCTGGGAATGGGTTCCCCTGGGCTCCTCCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: THSSGFLGSFQQEAS*TAPGNGFPWAPPCL
Trigger: CAAGCACGGAGGAGCCCAGGGGAACCCATTCCCAGGGGCAGTTCACGATGCCTCTTGCTGGAATGAGCCTAGGAAGCCTGAAGAGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 90 bp AGACCAAATAAAACAGTGCCCGCCAAGCCTGCTCCTGGCGGATGGTaGGCTGCCCACCAGCGGCGGCTCTCGTTCCTGCGGTTATTACTA +
Preference number: 5 (lower is better)
Translates to: RPNKTVPAKPAPGGW*AAHQRRLSFLRLLL
Trigger: TAGTAATAACCGCAGGAACGAGAGCCGCCGCTGGTGGGCAGCTCACCATCCGCCAGGAGCAGGCTTGGCGGGCACTGTTTTATTTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647414.1
CDS GCA 90 bp CTCTTCAGGCTTCCTAGGCTCATTCCAGCAAGAGGCATCGTGAACTaGCCCTGGGAATGGGTTCCCCTGGGCTCCTCCGTGCTTGTCGTT +
Preference number: 5 (lower is better)
Translates to: LFRLPRLIPARGIVN*PWEWVPLGSSVLVV
Trigger: AACGACAAGCACGGAGGAGCCCAGGGGAACCCATTCCCAGGGGCAGTTCACGATGCCTCTTGCTGGAATGAGCCTAGGAAGCCTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 90 bp CACCACTACCACCATCCAGGGAGAAGCCCTGACACCAGCCCGGCATaGCTTCTGGATGAATCCCCCTTCCGATTCTCATCGTGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: HHYHHPGRSPDTSPA*LLDESPFRFSSCRG
Trigger: ACCTCTGCACGATGAGAATCGGAAGGGGGATTCATCCAGAAGGCATGCCGGGCTGGTGTCAGGGCTTCTCCCTGGATGGTGGTAGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp TGTTGCTCTGCTGACAGTCCCTCAACCACATTCCCTTCTGGGGTCTaGTGCCCGTACCAGCCACCCCATCCAGGAAACCAGGACTGGAGA +
Preference number: 5 (lower is better)
Translates to: CCSADSPSTTFPSGV*CPYQPPHPGNQDWR
Trigger: TCTCCAGTCCTGGTTTCCTGGATGGGGTGGCTGGTACGGGCAGCAGACCCCAGAAGGGAATGTGGTTGAGGGACTGTCAGCAGAGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp AGCTTTGATCTCCACGCCAGAGATCAATGGCGCTGCCACAGCCCCTaGGCTATCTCGGCTGGTGGAGGCCAAGGAAAGAGACTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: SFDLHARDQWRCHSP*AISAGGGQGKRLQR
Trigger: CCTCTGAAGTCTCTTTCCTTGGCCTCCACCAGCCGAGATAGCCCAGGGGCTGTGGCAGCGCCATTGATCTCTGGCGTGGAGATCAAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp ACAGATGCACACACTCTCAGCTTTGATCTCCACGCCAGAGATCAATaGCGCTGCCACAGCCCCTGGGCTATCTCGGCTGGTGGAGGCCAA +
Preference number: 5 (lower is better)
Translates to: TDAHTLSFDLHARDQ*RCHSPWAISAGGGQ
Trigger: TTGGCCTCCACCAGCCGAGATAGCCCAGGGGCTGTGGCAGCGCCATTGATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGTGCATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp ACCACCATCCAGGGAGAAGCCCTGACACCAGCCCGGCATGCCTTCTaGATGAATCCCCCTTCCGATTCTCATCGTGCAGAGGTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: TTIQGEALTPARHAF*MNPPSDSHRAEVWL
Trigger: CAGCCAAACCTCTGCACGATGAGAATCGGAAGGGGGATTCATCCAGAAGGCATGCCGGGCTGGTGTCAGGGCTTCTCCCTGGATGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGAGCCTCATTGCGTGGTaGTCTGCAGTGGAGCCGATT +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLSLIAW*SAVEPI
Trigger: AATCGGCTCCACTGCAGACAACCACGCAATGAGGCT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGGCTCCAACTTCACGTaGTGCAGAATGCCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLGSNFT*CRMPSG
Trigger: TCCTGAGGGCATTCTGCACAACGTGAAGTTGGAGCC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTGGGCTCCTCCGTGCTaGTCGTTTTCCTCAGACTGT +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLWAPPC*SFSSDC
Trigger: ACAGTCTGAGGAAAACGACAAGCACGGAGGAGCCCA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTACTCTCACTTGCAGTaGATGAATCCGGAGGTCATG +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGYSHLQ*MNPEVM
Trigger: CATGACCTCCGGATTCATCAACTGCAAGTGAGAGTA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGCCATTTACTCTCACTaGCAGTTGATGAATCCGGAG +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGAIYSH*QLMNPE
Trigger: CTCCGGATTCATCAACTGCAAGTGAGAGTAAATGGC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGACACTCTTGGGATTaGGGGAAGGGGCCGCTTGTC +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHRHSWD*GKGPLV
Trigger: GACAAGCGGCCCCTTCCCCAAATCCCAAGAGTGTCT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGACATGGCTTGGCACCTaGCTTGGGCCTGGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLTWLGT*LGPGLF
Trigger: AAACAGACCAGGCCCAAGCAAGGTGCCAAGCCATGT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS GCA 90 bp CAGACTCCATGGAGGCATGTGGCTCCAACTTCACGTTGTGCAGAATaGCCTCAGGAGGCAGCCTCATTGCGTGGTTGTCTGCAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: QTPWRHVAPTSRCAE*PQEAASLRGCLQWS
Trigger: GCTCCACTGCAGACAACCACGCAATGAGGCTGCCTCCTGAGGGCATTCTGCACAACGTGAAGTTGGAGCCACATGCCTCCATGGAGTCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 90 bp GTGCTTGAGTCCTTAGAGGACTGCTGTGAAGACCAAATAAAACAGTaGCCGCCAAGCCTGCTCCTGGCGGATGGTGAGCTGCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: VLESLEDCCEDQIKQ*PPSLLLADGELPTS
Trigger: GCTGGTGGGCAGCTCACCATCCGCCAGGAGCAGGCTTGGCGGGCACTGTTTTATTTGGTCTTCACAGCAGTCCTCTAAGGACTCAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647414.1
CDS CCA 90 bp TGGACTCTTGGCCAACAGACAGTGTGGGTTGCGGCCCTTGCTGCTTaGTGGAGGTACTGGGCACAAACTCACTCTTCAGGCTTCCTAGGC +
Preference number: 5 (lower is better)
Translates to: WTLGQQTVWVAALAA*WRYWAQTHSSGFLG
Trigger: GCCTAGGAAGCCTGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp TCACTGCAGCGAGACCAGCAATATCTAAGATGGCAGACCCCTCGGTaGAGCGGGCGGCTGAGGGCTTATTGGGATTGTGAGGAACTGAGG +
Preference number: 5 (lower is better)
Translates to: SLQRDQQYLRWQTPR*SGRLRAYWDCEELR
Trigger: CCTCAGTTCCTCACAATCCCAATAAGCCCTCAGCCGCCCGCTCCACCGAGGGGTCTGCCATCTTAGATATTGCTGGTCTCGCTGCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS-3UTR CAA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGCTATACTCGGCAGTCTaGGTAGCTAGTACTGTGGTG +
Preference number: 5 (lower is better)
Translates to: LCMHARARTHTHTHTHTQLYSAV*VASTVV
Trigger: CACCACAGTACTAGCTACCAAGACTGCCGAGTATAG...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTGGACTGAGGAGAGATaGCCATGGATAGATATGTCT +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGWTEER*PWIDMS
Trigger: AGACATATCTATCCATGGCAATCTCTCCTCAGTCCA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGGGGACCTTAGAAAAGTaGTCAATTCGGAAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGGTLEK*SIRKGG
Trigger: TCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCC...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTGACAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGTGGGAGGGGGGGAACTTCACTGCGTaGACTTGCACAGCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: LTARTSDFTWTMGFWWEGGNFTA*TCTAGP
Trigger: CGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCCC...CCCCTCCCACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACCCGGGGCTTTGTTCTaGGTTGTTGCTGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRPGALF*VVAAQA
Trigger: TGCCTGGGCAGCAACAACCAAGAACAAAGCCCCGGG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAGAGGAGCTGCCATCTaGTGCAGTGCTGTATCCTGC +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHRGAAI*CSAVSC
Trigger: GCAGGATACAGCACTGCACAAGATGGCAGCTCCTCT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGCACTCTCACATGGCTaGGCACCTTGCTTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWALSHG*APCLGL
Trigger: CAGGCCCAAGCAAGGTGCCAAGCCATGTGAGAGTGC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCGACACATTTCCTCCTaGTCATCTGTGGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLRHISS*SSVDSR
Trigger: CCTGCTGTCCACAGATGACAAGGAGGAAATGTGTCG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp GATCAAGAGAACGGGAGCACCAGCCTCAATATCCAGGAGAACCCGTaGACAGCGCTGGGCTTGATCTCTCACCGTCTGCCCCTCAATAGC +
Preference number: 5 (lower is better)
Translates to: DQENGSTSLNIQENP*TALGLISHRLPLNS
Trigger: GCTATTGAGGGGCAGACGGTGAGAGATCAAGCCCAGCGCTGTTCACGGGTTCTCCTGGATATTGAGGCTGGTGCTCCCGTTCTCTTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 90 bp AGTGCCCAGGATCTCTTCAGGAATCCACTGCTCCTGTTGCTCTGCTaGCAGTCCCTCAACCACATTCCCTTCTGGGGTCTGCTGCCCGTA +
Preference number: 5 (lower is better)
Translates to: SAQDLFRNPLLLLLC*QSLNHIPFWGLLPV
Trigger: TACGGGCAGCAGACCCCAGAAGGGAATGTGGTTGAGGGACTGTCAGCAGAGCAACAGGAGCAGTGGATTCCTGAAGAGATCCTGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp GGACTACTGGACTCTTGGCCAACAGACAGTGTGGGTTGCGGCCCTTaGTGCTTGGTGGAGGTACTGGGCACAAACTCACTCTTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: GLLDSWPTDSVGCGP*CLVEVLGTNSLFRL
Trigger: AAGCCTGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 90 bp TGGTCTTCTGGACTACTGGACTCTTGGCCAACAGACAGTGTGGGTTaGGGCCCTTGCTGCTTGGTGGAGGTACTGGGCACAAACTCACTC +
Preference number: 5 (lower is better)
Translates to: WSSGLLDSWPTDSVG*GPCCLVEVLGTNSL
Trigger: GAGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCCAGAAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 90 bp ATGCAAACACAGGCTCCAGGACGTAGTGATGGCTGCGACTCTCCATaGTCCTGGCCATGGCCTCCTGTGTGTCACAAGAACACCTGCTCT +
Preference number: 5 (lower is better)
Translates to: MQTQAPGRSDGCDSP*SWPWPPVCHKNTCS
Trigger: AGAGCAGGTGTTCTTGTGACACACAGGAGGCCATGGCCAGGAGCATGGAGAGTCGCAGCCATCACTACGTCCTGGAGCCTGTGTTTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489961.1
CDS CCA 90 bp ACTCTTGGCCAACAGACAGTGTGGGTTGCGGCCCTTGCTGCTTGGTaGAGGTACTGGGCACAAACTCACTCTTCAGGCTTCCTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: TLGQQTVWVAALAAW*RYWAQTHSSGFLGS
Trigger: TGAGCCTAGGAAGCCTGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp CGTATCTGTTGTCAGTCACTGCAGCGAGACCAGCAATATCTAAGATaGCAGACCCCTCGGTGGAGCGGGCGGCTGAGGGCTTATTGGGAT +
Preference number: 5 (lower is better)
Translates to: RICCQSLQRDQQYLR*QTPRWSGRLRAYWD
Trigger: ATCCCAATAAGCCCTCAGCCGCCCGCTCCACCGAGGGGTCTGCCATCTTAGATATTGCTGGTCTCGCTGCAGTGACTGACAACAGATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTATACTCGGCAGTCTaGGTAGCTAGTACTGTGGTG +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLYSAV*VASTVV
Trigger: CACCACAGTACTAGCTACCAAGACTGCCGAGTATAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCAGGAGGCAGCCTCATaGCGTGGTTGTCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKQEAAS*RGCLQW
Trigger: CCACTGCAGACAACCACGCAATGAGGCTGCCTCCTG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTTACATTGACCTaGACCTCCAGGTGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLPVTLT*TSRCLS
Trigger: TGAAAGGCACCTGGAGGTCAAGGTCAATGTAACAGG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAATACACCCAATCCTTaGGGCCGGGCCTGTAGCCGC +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKNTPNP*GRACSR
Trigger: GCGGCTACAGGCCCGGCCCAAAGGATTGGGTGTATT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCAATACACCCAATCCTTaGGGCCGGGCCTGTAGCCGC +
Preference number: 5 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGNTPNP*GRACSR
Trigger: GCGGCTACAGGCCCGGCCCAAAGGATTGGGTGTATT...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCCTGCAGCATCTGTCTaGGCATTGTCCTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHPAASV*ALSCLK
Trigger: CTTCAGACAGGACAATGCCAAGACAGATGCTGCAGG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAAACTCCACGTCTGAGTaGTGCTTCGCCTGCGGTCAG +
Preference number: 5 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRNSTSE*CFACGQ
Trigger: CTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACCAGAAAGTCCTCCTTaGGCCTGGACGACCAACCCA +
Preference number: 5 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRPESPP*AWTTNP
Trigger: TGGGTTGGTCGTCCAGGCCAAAGGAGGACTTTCTGG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCCGAACCCTCTGTGCTaGAGTCCTGGGGCCGCTGAG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALPNPLC*SPGAAE
Trigger: CTCAGCGGCCCCAGGACTCAAGCACAGAGGGTTCGG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAATTCGTCCTGTATGTaGTCTGTGAGTTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGNSSCM*SVSLKS
Trigger: GCTCTTCAAACTCACAGACAACATACAGGACGAATT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGCCCGGGGCTTTGTTCTaGGTTGTTGCTGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVPGALF*VVAAQA
Trigger: TGCCTGGGCAGCAACAACCAAGAACAAAGCCCCGGG...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAATGGCTGCCGGCGCTaGGGGGTTTTCACCTCTGTT +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWNGCRR*GVFTSV
Trigger: AACAGAGGTGAAAACCCCCAAGCGCCGGCAGCCATT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000613099.4
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGGCTTGGCACCTTGCTaGGGCCTGGTCTGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWGLAPC*GLVCLK
Trigger: CTTCAAACAGACCAGGCCCAAGCAAGGTGCCAAGCC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAGCACTTTCATTCATTaGAGGAGTTCCTTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSTFIH*RSSLLL
Trigger: AAGGAGCAAGGAACTCCTCAAATGAATGAAAGTGCT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGTCTCTACCACATGTGTaGGTCCCACGTCAATATCCT +
Preference number: 5 (lower is better)
Translates to: LCMHARARTHTHTHTHTQSLPHV*VPRQYP
Trigger: AGGATATTGACGTGGGACCAACACATGTGGTAGAGA...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAATGGCTGCCGGCGCTaGGGGGTTTTCACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKNGCRR*GVFTSA
Trigger: AGCAGAGGTGAAAACCCCCAAGCGCCGGCAGCCATT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000620676.6
CDS TCA 90 bp GGGCACTCTCACATGGCTTGGCACCTTGCTTGGGCCTGGTCTGTTTaGAGGGTAGCAGGCTCTTCACATAGCTTCAGTGGCACCTCAAGT +
Preference number: 5 (lower is better)
Translates to: GHSHMAWHLAWAWSV*RVAGSSHSFSGTSS
Trigger: ACTTGAGGTGCCACTGAAGCTATGTGAAGAGCCTGCTACCCTTCAAACAGACCAGGCCCAAGCAAGGTGCCAAGCCATGTGAGAGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS GCA 90 bp GAGAGGACTCAGGCTACGGGCCAGCTCATGCTCCTCAAACTGGCCTaGAGCATCTGTCTTGGCATTGTCCTGTCTGAAGATCAGTGGCAA +
Preference number: 5 (lower is better)
Translates to: ERTQATGQLMLLKLA*SICLGIVLSEDQWQ
Trigger: TTGCCACTGATCTTCAGACAGGACAATGCCAAGACAGATGCTGCAGGCCAGTTTGAGGAGCATGAGCTGGCCCGTAGCCTGAGTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
ENST00000646917.1
CDS GCA 90 bp TCAAAAGAGCAGATGCAAACACAGGCTCCAGGACGTAGTGATGGCTaGGACTCTCCATGCTCCTGGCCATGGCCTCCTGTGTGTCACAAG +
Preference number: 5 (lower is better)
Translates to: SKEQMQTQAPGRSDG*DSPCSWPWPPVCHK
Trigger: CTTGTGACACACAGGAGGCCATGGCCAGGAGCATGGAGAGTCGCAGCCATCACTACGTCCTGGAGCCTGTGTTTGCATCTGCTCTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489961.1
CDS GCA 90 bp AACTCCTCAGTGCCCAGGATCTCTTCAGGAATCCACTGCTCCTGTTaGTCTGCTGACAGTCCCTCAACCACATTCCCTTCTGGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: NSSVPRISSGIHCSC*SADSPSTTFPSGVC
Trigger: GCAGACCCCAGAAGGGAATGTGGTTGAGGGACTGTCAGCAGAGCAACAGGAGCAGTGGATTCCTGAAGAGATCCTGGGCACTGAGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp GAAATGAGCTTCCTCCTGACTGTTGGCACTGCCAGACCCGGAAGGTaGGCAAAACATCCGGCTTCCTTCAGACCCAACAGCTTCTCTACC +
Preference number: 5 (lower is better)
Translates to: EMSFLLTVGTARPGR*AKHPASFRPNSFST
Trigger: GGTAGAGAAGCTGTTGGGTCTGAAGGAAGCCGGATGTTTTGCCCACCTTCCGGGTCTGGCAGTGCCAACAGTCAGGAGGAAGCTCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp CAACAGACAGTGTGGGTTGCGGCCCTTGCTGCTTGGTGGAGGTACTaGGCACAAACTCACTCTTCAGGCTTCCTAGGCTCATTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: QQTVWVAALAAWWRY*AQTHSSGFLGSFQQ
Trigger: TTGCTGGAATGAGCCTAGGAAGCCTGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp AGACATGGTCTTCTGGACTACTGGACTCTTGGCCAACAGACAGTGTaGGTTGCGGCCCTTGCTGCTTGGTGGAGGTACTGGGCACAAACT +
Preference number: 5 (lower is better)
Translates to: RHGLLDYWTLGQQTV*VAALAAWWRYWAQT
Trigger: AGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCCAGAAGACCATGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp TCCAAACGAGGTTTGGCCTTGGCTTCTAGCTTCAGTCGAGGAGGATaGAGACGACTAGCTGCCTGCTGTTGCCAGGATACAGAGCATGGC +
Preference number: 5 (lower is better)
Translates to: SKRGLALASSFSRGG*RRLAACCCQDTEHG
Trigger: GCCATGCTCTGTATCCTGGCAACAGCAGGCAGCTAGTCGTCTCCATCCTCCTCGACTGAAGCTAGAAGCCAAGGCCAAACCTCGTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp CAGTGCACTCTTACTGGGGAACTTCACTGCGTTGACTTGCACAGCTaGGCCGGTCTCGATGACCTCATTCTCATTGCTCAGGGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: QCTLTGELHCVDLHS*AGLDDLILIAQGSH
Trigger: GTGACTCCCCTGAGCAATGAGAATGAGGTCATCGAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGTAAGAGTGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS CCA 90 bp CCTCTGCCACCGATGCGGCCTCCTTGGAGACAGGCAGGTTTCCTGTaGTGTCAGCCCTGTTTCCTCCAGCAACATTATACCACAAACAGA +
Preference number: 5 (lower is better)
Translates to: PLPPMRPPWRQAGFL*CQPCFLQQHYTTNR
Trigger: TCTGTTTGTGGTATAATGTTGCTGGAGGAAACAGGGCTGACACCACAGGAAACCTGCCTGTCTCCAAGGAGGCCGCATCGGTGGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645148.1
CDS-3UTR CAA 90 bp CACTTCAGTCCGGAGCCTGGGTTCAGCTACGCCATGCTGAGTAAAGACAACCGGATGGGTTCTCCCAGGTaGTTCTCTAATAAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: HFSPEPGFSYAMLSKDNRMGSPR*FSNKPR
Trigger: CCGCGGCTTATTAGAGAACAACCTGGGAGAACCCAT...CCGGTTGTCTTTACTCAGCATGGCGTAGCTGAACCCAGGCTCCGGACTGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCACTGCAGCATTAGCTaGCTCTGGGATGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHHCSIS*LWDGFC
Trigger: GCAAAATCCATCCCAGAGCAAGCTAATGCTGCAGTG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCACGCCAAAAGAGCTTaGCGACAATCATCCATGCTG +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHHAKRA*RQSSML
Trigger: CAGCATGGATGATTGTCGCAAAGCTCTTTTGGCGTG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGAGCACAGAAGTGATATaGATATCCAAACGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGSTEVI*ISKRGL
Trigger: CAAACCTCGTTTGGATATCAATATCACTTCTGTGCT...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGCAGGTAATGGCCTTGTaGGAAGCCACAGGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVQVMAL*EATGLP
Trigger: AGGCAGGCCTGTGGCTTCCAACAAGGCCATTACCTG...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAACTCCACGTCTGAGTaGTGCTTCGCCTGCGGTCAG +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKNSTSE*CFACGQ
Trigger: CTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTCCAATGGGAGCTTGTaGGAGGTGAACACACTTAGC +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHSNGSL*EVNTLS
Trigger: GCTAAGTGTGTTCACCTCCAACAAGCTCCCATTGGA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGACAGCCAGGGAGTGACACGGGTCGGCCAACTGTGCTGGGTCAAGGGACTGGGTGTTTGAGGATATCATaGATGATGAACTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: RQPGSDTGRPTVLGQGTGCLRIS*MMNSLV
Trigger: GACCAAGGAGTTCATCATCAATGATATCCTCAAACA...CCCAGTCCCTTGACCCAGCACAGTTGGCCGACCCGTGTCACTCCCTGGCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGGGCTTTGTTCTTGGTaGTTGCTGCCCAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKGLCSW*LLPRQE
Trigger: CTCCTGCCTGGGCAGCAACAACCAAGAACAAAGCCC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTTAGATATCGCCACCTaGGGTTTCCACCTTCGGAAC +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHLDIAT*GFHLRN
Trigger: GTTCCGAAGGTGGAAACCCAAGGTGGCGATATCTAA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp CCATGTAACCCACAGGTCAGTTTTCCTTCTCGGAAACTCCACGTCTaGGTTGTGCTTCGCCTGCGGTCAGGCTTTCTCAGCATCAGTGGC +
Preference number: 5 (lower is better)
Translates to: PCNPQVSFPSRKLHV*VVLRLRSGFLSISG
Trigger: GCCACTGATGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCGAGAAGGAAAACTGACCTGTGGGTTACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS TCA 90 bp CTGGACTCCCACTGTGAGAGAGTGCAGCTCTGGAACCAAATCAGATaGCATCAGCCTGTCCCTGTTTCTTCCCAGCTCCCTCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: LDSHCERVQLWNQIR*HQPVPVSSQLPLTG
Trigger: TCCTGTGAGAGGGAGCTGGGAAGAAACAGGGACAGGCTGATGTCATCTGATTTGGTTCCAGAGCTGCACTCTCTCACAGTGGGAGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643711.1
CDS GCA 90 bp GACATCCTGCAGCTGAGTGAAATGCTGAATGAAGGCCACCACCTCTaGCTGGAAACGCTGAGTATGCACATACTGCACAGAGGCCATCCG +
Preference number: 5 (lower is better)
Translates to: DILQLSEMLNEGHHL*LETLSMHILHRGHP
Trigger: CGGATGGCCTCTGTGCAGTATGTGCATACTCAGCGTTTCCAGGCAGAGGTGGTGGCCTTCATTCAGCATTTCACTCAGCTGCAGGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 90 bp ACCCACAGGTCAGTTTTCCTTCTCGGAAACTCCACGTCTGAGTTGTaGTTCGCCTGCGGTCAGGCTTTCTCAGCATCAGTGGCTCGTATC +
Preference number: 5 (lower is better)
Translates to: THRSVFLLGNSTSEL*FACGQAFSASVARI
Trigger: GATACGAGCCACTGATGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCGAGAAGGAAAACTGACCTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS GCA 90 bp TCAAAAGAGCAGATGCAAACACAGGCTCCAGGACGTAGTGATGGCTaGGACTCTCCATGCTCCTGGCCATGGCCTCCTGTAACTCCATCT +
Preference number: 5 (lower is better)
Translates to: SKEQMQTQAPGRSDG*DSPCSWPWPPVTPS
Trigger: AGATGGAGTTACAGGAGGCCATGGCCAGGAGCATGGAGAGTCGCAGCCATCACTACGTCCTGGAGCCTGTGTTTGCATCTGCTCTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp TCCGCCAGGAGGAGCTGCGACTCCACCAGAACCTCGCGGGTATGCTaGTCCAACAACACAATGCTCTGGGTTAAATTCATTACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: SARRSCDSTRTSRVC*SNNTMLWVKFITES
Trigger: AGACTCCGTAATGAATTTAACCCAGAGCATTGTGTTGTTGGAGCAGCATACCCGCGAGGTTCTGGTGGAGTCGCAGCTCCTCCTGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp AGCAACGCGGTTTCCGAACCCTCTGTGCTTGAGTCCTTAGAGGACTaGTGTGAAGACCAAATAAAACAGTGCCCGCCAAGCCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: SNAVSEPSVLESLED*CEDQIKQCPPSLLL
Trigger: CAGGAGCAGGCTTGGCGGGCACTGTTTTATTTGGTCTTCACAGCAGTCCTCTAAGGACTCAAGCACAGAGGGTTCGGAAACCGCGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647414.1
CDS CCA 90 bp TTTGGTGTTCACTGGATCCTGAAGTCCAGACTCCATGGAGGCATGTaGCTCCAACTTCACGTTGTGCAGAATGCCCTCAGGAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: FGVHWILKSRLHGGM*LQLHVVQNALRRQP
Trigger: AGGCTGCCTCCTGAGGGCATTCTGCACAACGTGAAGTTGGAGCCACATGCCTCCATGGAGTCTGGACTTCAGGATCCAGTGAACACCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp GTGAGTATCATCGAGAAATGTTCCGTTCCCTTCTGGAACTACCCCTaGACTCCCACTGTGAGAGAGTGCAGCTCTGGTGGGTGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: VSIIEKCSVPFWNYP*TPTVRECSSGGCGG
Trigger: ACCACCACACCCACCAGAGCTGCACTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACATTTCTCGATGATACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAGCCTCATTGCGTGGTaGTCTGCAGTGGAGCCGATT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVSLIAW*SAVEPI
Trigger: AATCGGCTCCACTGCAGACAACCACGCAATGAGGCT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCAGCCTCATTGCGTGGTaGTCTGCAGTGGAGCCGATT +
Preference number: 5 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGSLIAW*SAVEPI
Trigger: AATCGGCTCCACTGCAGACAACCACGCAATGAGGCT...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCAGGAGGCAGCCTCATaGCGTGGTTGTCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFQEAAS*RGCLQW
Trigger: CCACTGCAGACAACCACGCAATGAGGCTGCCTCCTG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTAATTTGGACACATTaGCTTTGGCAAGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLIWTH*LWQAHW
Trigger: CCAGTGAGCTTGCCAAAGCAAATGTGTCCAAATTAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGAGGTGTGCTACTAATTaGGACACATTTGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: LCMHARARTHTHTHTHTQRCATN*DTFALA
Trigger: TGCCAAAGCAAATGTGTCCAAATTAGTAGCACACCT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGTTTGGGAATACCCGTaGGGGAAGCTGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKVWEYP*GKLKAQ
Trigger: CTGTGCCTTCAGCTTCCCCAACGGGTATTCCCAAAC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTGGACTACTGGACTCTaGGCCAACAGACAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKWTTGL*ANRQCG
Trigger: CCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCCA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGAAGCCGCGGATCAGCTaGTATTTATACAGATCCAGA +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLKPRIS*YLYRSR
Trigger: TCTGGATCTGTATAAATACAAGCTGATCCGCGGCTT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTGCTGCCTTTTTCAATaGGCCTTGACACGCCAAAAG +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHCCLFQ*ALTRQK
Trigger: CTTTTGGCGTGTCAAGGCCAATTGAAAAAGGCAGCA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACACACACTCTCAGCTTaGATCTCCACGCCAGAGATC +
Preference number: 5 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRHTLSA*ISTPEI
Trigger: GATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGTG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCAATGGCTGCCGGCGCTaGGGGGTTTTCACCTCTCTA +
Preference number: 5 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFNGCRR*GVFTSL
Trigger: TAGAGAGGTGAAAACCCCCAAGCGCCGGCAGCCATT...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTAATACACCCAATCCTTaGGGCCGGGCCTGTAGCCGC +
Preference number: 5 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFNTPNP*GRACSR
Trigger: GCGGCTACAGGCCCGGCCCAAAGGATTGGGTGTATT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTCTCACCATATAGTTTaGGGTTCCAGGTGGAATGAG +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLSHHIV*GSRWNE
Trigger: CTCATTCCACCTGGAACCCAAAACTATATGGTGAGA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCCCTGGGCGGTTTCCTaGCTGGATGACTTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKPWAVS*LDDFQS
Trigger: GCTTTGAAAGTCATCCAGCAAGGAAACCGCCCAGGG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTCACTGCGTTGACTaGCACAGCTGGGCCGGTCTC +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGLHCVD*HSWAGL
Trigger: GAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GGAGGAGATGAGCACGCAGTAGCTGTCAATGTTCTCCACAGCGATGAAGAATTCCTTCACTGCGTTGACTaGCACAGCTGGGCCGGTCTC +
Preference number: 5 (lower is better)
Translates to: GGDEHAVAVNVLHSDEEFLHCVD*HSWAGL
Trigger: GAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAG...GAATTCTTCATCGCTGTGGAGAACATTGACAGCTACTGCGTGCTCATCTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCAAAGTAGTATCGAATaGGTGTTCCACCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLQSSIE*VFHLAQ
Trigger: CTGAGCAAGGTGGAACACCAATTCGATACTACTTTG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGTGCTCACGGCTTTCTaGGTCACCTGCACATACACC +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKVLTAF*VTCTYT
Trigger: GGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCAC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGGTTTTCACCTCTGTTaGTCCAAAACATGGAGGATC +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLGFHLC*SKTWRI
Trigger: GATCCTCCATGTTTTGGACAAACAGAGGTGAAAACC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000613099.4
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCATGATTTGCCGGTATaGCAGCTGAGAGAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLHDLPV*QLREFQ
Trigger: TTGAAACTCTCTCAGCTGCAATACCGGCAAATCATG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAGAGGAGCTGCCATCTaGTGCAGTGCTGTATCCTGC +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKRGAAI*CSAVSC
Trigger: GCAGGATACAGCACTGCACAAGATGGCAGCTCCTCT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGGAGTTCCTTGCTCCTaGTGTAACAGAGTCACTGTA +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHGVPCS*CNRVTV
Trigger: TACAGTGACTCTGTTACACAAGGAGCAAGGAACTCC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp TTGGCTTCTAGCTTCAGTCGAGGAGGATGGAGACGACTAGCTGCCTaGTGTTGCCAGGATACAGAGCATGGCCAAGGCTCAATAAATGGC +
Preference number: 5 (lower is better)
Translates to: LASSFSRGGWRRLAA*CCQDTEHGQGSING
Trigger: GCCATTTATTGAGCCTTGGCCATGCTCTGTATCCTGGCAACAGCAGGCAGCTAGTCGTCTCCATCCTCCTCGACTGAAGCTAGAAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 90 bp TTCAAGGGCCTTGTGCTGACATTGAGCCGCCTCTCAAAGTGGCTGTaGGCCGGATTTCTCTCATACAGCATCTCAAAAACGGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: FKGLVLTLSRLSKWL*AGFLSYSISKTGPS
Trigger: AGATGGCCCCGTTTTTGAGATGCTGTATGAGAGAAATCCGGCGCACAGCCACTTTGAGAGGCGGCTCAATGTCAGCACAAGGCCCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp AATTCCGCCAGGAGGAGCTGCGACTCCACCAGAACCTCGCGGGTATaGTGCTCCAACAACACAATGCTCTGGGTTAAATTCATTACGGAG +
Preference number: 5 (lower is better)
Translates to: NSARRSCDSTRTSRV*CSNNTMLWVKFITE
Trigger: CTCCGTAATGAATTTAACCCAGAGCATTGTGTTGTTGGAGCAGCATACCCGCGAGGTTCTGGTGGAGTCGCAGCTCCTCCTGGCGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp ACACCAAGCTGCATACAGTTCACTTTAAATTCCGCCAGGAGGAGCTaGGACTCCACCAGAACCTCGCGGGTATGCTGCTCCAACAACACA +
Preference number: 5 (lower is better)
Translates to: TPSCIQFTLNSARRS*DSTRTSRVCCSNNT
Trigger: TGTGTTGTTGGAGCAGCATACCCGCGAGGTTCTGGTGGAGTCGCAGCTCCTCCTGGCGGAATTTAAAGTGAACTGTATGCAGCTTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp CAGTTAAGTGGGCCACATTCGGTCCAGAGACAGGAGACTGGGCCCTaGTATCCCGAAGGCTTCCCGTTGGAATATCAAAGCTCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: QLSGPHSVQRQETGP*YPEGFPLEYQSSSS
Trigger: AGAACTTGAGCTTTGATATTCCAACGGGAAGCCTTCGGGATAGCAGGGCCCAGTCTCCTGTCTCTGGACCGAATGTGGCCCACTTAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp TCCGTTCCCTTCTGGAACTACCCCTGGACTCCCACTGTGAGAGAGTaGAGCTCTGGAACCAAATCAGATGACATCAGCCTGTCCCTGTTT +
Preference number: 5 (lower is better)
Translates to: SVPFWNYPWTPTVRE*SSGTKSDDISLSLF
Trigger: AAACAGGGACAGGCTGATGTCATCTGATTTGGTTCCAGAGCTGCACTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643711.1
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGCTCATATACATGCTTaGCTAACACCACCTGAACTG +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHAHIHA*LTPPEL
Trigger: CAGTTCAGGTGGTGTTAGCAAAGCATGTATATGAGC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGGGGATAGTCCTTGTCTaGGACTTCCTTTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLGIVLV*DFLLLF
Trigger: AAAAAGCAAAAGGAAGTCCAAGACAAGGACTATCCC...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTTTCCAACAAGTATCTaGGGCTCATCCACTGTTGGA +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHFPTSI*GSSTVG
Trigger: TCCAACAGTGGATGAGCCCAAGATACTTGTTGGAAA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGATTGGACACATTTGCTTaGGCAAGCTCACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRLDTFA*ASSLVV
Trigger: GACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCAA...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCAGGTTTGGGAATACCCGTaGGGGAAGCTGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: RHNPMKSWASLQSGAWVQVWEYP*GKLKAQ
Trigger: CTGTGCCTTCAGCTTCCCCAACGGGTATTCCCAAAC...CTGAACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAACAGACAGTGTGGGTaGCGGCCCTTGCTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALNRQCG*RPLLLG
Trigger: ACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAACAGACAGTGTGGGTaGCGGCCCTTGCTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGANRQCG*RPLLLG
Trigger: ACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGAACACACGGAGATTGTaGAGAACTACTGTAAAGCAG +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLNTRRL*RTTVKQ
Trigger: CTGCTTTACAGTAGTTCTCAACAATCTCCGTGTGTT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCCACTCTTCACAGTTTaGGGAACTATAGCAGATTCG +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHPLFTV*GTIADS
Trigger: CGAATCTGCTATAGTTCCCAAAACTGTGAAGAGTGG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGGAAGGGAAGACCGCTaGGTAACTACTCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVGREDR*VTTPLF
Trigger: GAAGAGTGGAGTAGTTACCAAGCGGTCTTCCCTTCC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTCCAGGTGCCTTTCATaGGACACAGGAAGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVSRCLS*DTGRED
Trigger: GTCTTCCCTTCCTGTGTCCAATGAAAGGCACCTGGA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGCCTGTTACATTGACCTaGACCTCCAGGTGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWPVTLT*TSRCLS
Trigger: TGAAAGGCACCTGGAGGTCAAGGTCAATGTAACAGG...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCTTTTTCAATTGGCCTaGACACGCCAAAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLLFQLA*TRQKSF
Trigger: AAAGCTCTTTTGGCGTGTCAAGGCCAATTGAAAAAG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGGAAGCACCACTGGCTaGTCTGGAGCTGATGGGCTA +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAGSTTG*SGADGL
Trigger: TAGCCCATCAGCTCCAGACAAGCCAGTGGTGCTTCC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCCCTGCAGCATCTGTCTaGGCATTGTCCTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGPAASV*ALSCLK
Trigger: CTTCAGACAGGACAATGCCAAGACAGATGCTGCAGG...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTGCACAGGTAATGGCCTaGTTGGAAGCCACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFAQVMA*LEATGL
Trigger: CAGGCCTGTGGCTTCCAACAAGGCCATTACCTGTGC...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACAATTGGTGTTCCACCTaGCTCAGCTGTCTTTTCATG +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHNWCST*LSCLFM
Trigger: CATGAAAAGACAGCTGAGCAAGGTGGAACACCAATT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGCGCCTGCCACTGGCTaGGTTACAGTGCCAACAAGC +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSAPATG*VTVPTS
Trigger: GCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GAGCACGCAGTAGCTGTCAATGTTCTCCACAGCGATGAAGAATTCGTCCTGTATGCGCCTGCCACTGGCTaGGTTACAGTGCCAACAAGC +
Preference number: 5 (lower is better)
Translates to: EHAVAVNVLHSDEEFVLYAPATG*VTVPTS
Trigger: GCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGC...ATACAGGACGAATTCTTCATCGCTGTGGAGAACATTGACAGCTACTGCGTGCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp GCTGTGTCTCTCACCGCCTGGGCTGTTTCTGATGCAAAATCCAGGGCGCCTGCCAATTCGTCCTGTATGTaGTCTGTGAGTTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: AVSLTAWAVSDAKSRAPANSSCM*SVSLKS
Trigger: GCTCTTCAAACTCACAGACAACATACAGGACGAATT...GGCAGGCGCCCTGGATTTTGCATCAGAAACAGCCCAGGCGGTGAGAGACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGGGCTTTGTTCTTGGTaGTTGCTGCCCAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAGLCSW*LLPRQE
Trigger: CTCCTGCCTGGGCAGCAACAACCAAGAACAAAGCCC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACGTTTCCTCCAAAGCTTaGGATGTTTTCCTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHVSSKA*DVFLVR
Trigger: TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAAC...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGGCCTTGTGCTGACATaGAGCCGCCTCTCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALGLVLT*SRLSKW
Trigger: CCACTTTGAGAGGCGGCTCAATGTCAGCACAAGGCC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTGCCGGATTTCTGCCTaGGTCTGCATCTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKCRISA*VCIFSL
Trigger: CAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGCA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTGCCGGATTTCTGCCTaGGTCTGCATCTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVCRISA*VCIFSL
Trigger: CAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGCA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGAAATGTACCGGCCATaGCTCTCAACACCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVEMYRP*LSTPSC
Trigger: GCAGCTTGGTGTTGAGAGCAATGGCCGGTACATTTC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp TCAGTTTTCCTTCTCGGAAACTCCACGTCTGAGTTGTGCTTCGCCTaGGGTCAGGCTTTCTCAGCATCAGTGGCTCGTATCTGTTGTCAG +
Preference number: 5 (lower is better)
Translates to: SVFLLGNSTSELCFA*GQAFSASVARICCQ
Trigger: CTGACAACAGATACGAGCCACTGATGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCGAGAAGGAAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS GCA 90 bp ATGCTTGTAGATGTTGGTCAGTGCACTCTTACTGGGGAACTTCACTaGGTTGACTTGCACAGCTGGGCCGGTCTCGATGACCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: MLVDVGQCTLTGELH*VDLHSWAGLDDLIL
Trigger: GAGAATGAGGTCATCGAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGTAAGAGTGCACTGACCAACATCTACAAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS GCA 90 bp GCGACTCCACCAGAACCTCGCGGGTATGCTGCTCCAACAACACAATaGTCTGGGTTAAATTCATTACGGAGTCTTGCAAACTTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: ATPPEPRGYAAPTTQ*SGLNSLRSLANFPA
Trigger: AGCGGGGAAGTTTGCAAGACTCCGTAATGAATTTAACCCAGAGCATTGTGTTGTTGGAGCAGCATACCCGCGAGGTTCTGGTGGAGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp TCCAGTGATACCCCCAGCTCAATGTTCTGGGATGTATCAGCTGTATaGAGAGCTGCCTCCTTGCCAGGTTTCAGCGTCCCATTAATTGGC +
Preference number: 5 (lower is better)
Translates to: SSDTPSSMFWDVSAV*RAASLPGFSVPLIG
Trigger: GCCAATTAATGGGACGCTGAAACCTGGCAAGGAGGCAGCTCTCCATACAGCTGATACATCCCAGAACATTGAGCTGGGGGTATCACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp AATAAGAGAGGACTCAGGCTACGGGCCAGCTCATGCTCCTCAAACTaGCCTGCAGCATCTGTCTTGGCATTGTCCTGTCTGAAGATCAGT +
Preference number: 5 (lower is better)
Translates to: NKRGLRLRASSCSSN*PAASVLALSCLKIS
Trigger: ACTGATCTTCAGACAGGACAATGCCAAGACAGATGCTGCAGGCCAGTTTGAGGAGCATGAGCTGGCCCGTAGCCTGAGTCCTCTCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
ENST00000646917.1
CDS CCA 90 bp ATGATGTTCAAGGGCCTTGTGCTGACATTGAGCCGCCTCTCAAAGTaGCTGTGCGCCGGATTTCTCTCATACAGCATCTCAAAAACGGGG +
Preference number: 5 (lower is better)
Translates to: MMFKGLVLTLSRLSK*LCAGFLSYSISKTG
Trigger: CCCCGTTTTTGAGATGCTGTATGAGAGAAATCCGGCGCACAGCCACTTTGAGAGGCGGCTCAATGTCAGCACAAGGCCCTTGAACATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp TCCACCAGAACCTCGCGGGTATGCTGCTCCAACAACACAATGCTCTaGGTTAAATTCATTACGGAGTCTTGCAAACTTCCCCGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: STRTSRVCCSNNTML*VKFITESCKLPRCS
Trigger: GGAGCAGCGGGGAAGTTTGCAAGACTCCGTAATGAATTTAACCCAGAGCATTGTGTTGTTGGAGCAGCATACCCGCGAGGTTCTGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCAGGATGTGAAAAGCTaGACCTCTATGCAAAGATTC +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHQDVKS*TSMQRF
Trigger: GAATCTTTGCATAGAGGTCAAGCTTTTCACATCCTG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTATCACAACCCAGGTTaGCAGTGTGATCAGCACATC +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWYHNPG*QCDQHI
Trigger: GATGTGCTGATCACACTGCAAACCTGGGTTGTGATA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGCCTCATTGCGTGGTaGTCTGCAGTGGAGCCGATT +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSLIAW*SAVEPI
Trigger: AATCGGCTCCACTGCAGACAACCACGCAATGAGGCT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGTTTGGGAATACCCGTaGGGGAAGCTGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALVWEYP*GKLKAQ
Trigger: CTGTGCCTTCAGCTTCCCCAACGGGTATTCCCAAAC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGTTTGGGAATACCCGTaGGGGAAGCTGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGVWEYP*GKLKAQ
Trigger: CTGTGCCTTCAGCTTCCCCAACGGGTATTCCCAAAC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACACATGTGGGTTGCGGCCCTaGCTGCTTGGTGGAGGTACT +
Preference number: 5 (lower is better)
Translates to: DFKASRPNTIGNVHQSDTCGLRP*LLGGGT
Trigger: AGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACA...TGTGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTGGACTACTGGACTCTaGGCCAACAGACAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGWTTGL*ANRQCG
Trigger: CCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCCA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTGGACTACTGGACTCTaGGCCAACAGACAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALWTTGL*ANRQCG
Trigger: CCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCCA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCTGCATGCACGCGCGCGCGCGCACACACACACACACACACACACACACACAGACCAAGTTAATGGACTaGGTTTGGTTGGAAAAACTT +
Preference number: 5 (lower is better)
Translates to: LCMHARARTHTHTHTHTQTKLMD*VWLEKL
Trigger: AAGTTTTTCCAACCAAACCAAGTCCATTAACTTGGT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTGCATGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCAATCTGAATGGACCCTaGGGTGGTGCTGCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGNLNGP*GGAAVL
Trigger: AAGAACAGCAGCACCACCCAAGGGTCCATTCAGATT...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTCACTGCAGCATTAGCTaGCTCTGGGATGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVHCSIS*LWDGFC
Trigger: GCAAAATCCATCCCAGAGCAAGCTAATGCTGCAGTG...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCCACACACTCTCAGCTTaGATCTCCACGCCAGAGATC +
Preference number: 5 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFHTLSA*ISTPEI
Trigger: GATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGTG...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACCAGACCAAATACAATaGGGAACGTCCATCAGTCTG +
Preference number: 5 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRPDQIQ*GTSISL
Trigger: CAGACTGATGGACGTTCCCAATTGTATTTGGTCTGG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGAAGGAATTATTCTTGTaGACTTCAAAGCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLKELFL*TSKPPD
Trigger: GTCTGGAGGCTTTGAAGTCAACAAGAATAATTCCTT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGTGGAAGGAATTATTCTaGTTGACTTCAAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLWKELF*LTSKPP
Trigger: TGGAGGCTTTGAAGTCAACAAGAATAATTCCTTCCA...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCAGGTAATGGCCTTGTaGGAAGCCACAGGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSQVMAL*EATGLP
Trigger: AGGCAGGCCTGTGGCTTCCAACAAGGCCATTACCTG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCTTCACTGCGTTGACTaGCACAGCTGGGCCGGTCTC +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLLHCVD*HSWAGL
Trigger: GAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCCAACAAGCCCTTTTCCAAGGCCAGATATGAAACCGCTGACACCCCCTTCTGTTCCAATGGGAGCTTGTaGGAGGTGAACACACTTAGC +
Preference number: 5 (lower is better)
Translates to: ANKPFSKARYETADTPFCSNGSL*EVNTLS
Trigger: GCTAAGTGTGTTCACCTCCAACAAGCTCCCATTGGA...ACAGAAGGGGGTGTCAGCGGTTTCATATCTGGCCTTGGAAAAGGGCTTGTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp ACTGGTCAGTCCACCAATGATACCATGAGCCAGGCCATGGATGCCGGCTACAAGATGTTGTCTGTGAGTTaGAAGAGCTGCTCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: TGQSTNDTMSQAMDAGYKMLSVS*KSCSCP
Trigger: AGGACAGGAGCAGCTCTTCAAACTCACAGACAACAT...CTTGTAGCCGGCATCCATGGCCTGGCTCATGGTATCATTGGTGGACTGACCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACATTTCTTGTGACAACTaGACAGCAAGGACCTCAGAT +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHISCDN*TARTSD
Trigger: ATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAAT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCATAGTAGAGGCTCTTaGCGTAGTTTATTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLHSRGS*RSLFLV
Trigger: CACAAGAAATAAACTACGCAAAGAGCCTCTACTATG...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCCTGGGGTTTCCATCCTGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGATGTGGATTTCTGATTaGTTGCAACAGTTCAATGGG +
Preference number: 5 (lower is better)
Translates to: SSWGFHPVSPRAVELRCLMWISD*LQQFNG
Trigger: CCCATTGAACTGTTGCAACAAATCAGAAATCCACAT...CAGGCATCGTAGCTCCACAGCCCGAGGGGACACAGGATGGAAACCCCAGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCTTTGTTCTTGGTTGTaGCTGCCCAGGCAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLCSWL*LPRQES
Trigger: GCTCTCCTGCCTGGGCAGCAACAACCAAGAACAAAG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACTTTGTTCTTGGTTGTaGCTGCCCAGGCAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGALCSWL*LPRQES
Trigger: GCTCTCCTGCCTGGGCAGCAACAACCAAGAACAAAG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAACAGTCCCGGGGCTTaGTTCTTGGTTGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALNSPGA*FLVVAA
Trigger: GGCAGCAACAACCAAGAACAAAGCCCCGGGACTGTT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAAAAGGATGGGAGGGATaGGTGACACCATCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRKGWEG*VTPSSK
Trigger: CTTTGAAGATGGTGTCACCAATCCCTCCCATCCTTT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCTGCAATCCACTAACTaGGAGTTCAGCAAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWLQSTN*EFSKGN
Trigger: GTTGCCTTTGCTGAACTCCAAGTTAGTGGATTGCAG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAGGGACTGGGTAGCTTaGGATATCTCCTTACCCAAT +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWRDWVA*DISLPN
Trigger: ATTGGGTAAGGAGATATCCAAAGCTACCCAGTCCCT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTTGGGCCTGGTCTGTTaGAAGGGTAGCAGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGLGLVC*KGSRLF
Trigger: GAAGAGCCTGCTACCCTTCAAACAGACCAGGCCCAA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR CAA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGACCTCCTGGAGTTATCTaGGGTGTTCGTCAAAAGCAT +
Preference number: 5 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRPPGVI*GVRQKH
Trigger: ATGCTTTTGACGAACACCCAAGATAACTCCAGGAGG...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTTTAAGTCTGGTAAGTaGCCTGAGAGCACGGCTCCT +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKFKSGK*PESTAP
Trigger: AGGAGCCGTGCTCTCAGGCAACTTACCAGACTTAAA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCCCGAAGGCTTCCCGTaGGAATATCAAAGCTCAAGT +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKPEGFP*EYQSSS
Trigger: ACTTGAGCTTTGATATTCCAACGGGAAGCCTTCGGG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGGAACACCACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCCGACCTCGGCCTTTCTaGACATCAATACAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: VEHHTGTRKGGNVTFGIGRPRPF*TSIQVW
Trigger: CCAAACCTGTATTGATGTCAAGAAAGGCCGAGGTCG...GCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTGGTGTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS TCA 90 bp GACGGTCACTTCTGGATTCATCATCTCCCGCCACAAAATTCTGGATaGATATCTGTCCCAAGTGTCCCACCAACAACTCAGGACTCCCCG +
Preference number: 5 (lower is better)
Translates to: DGHFWIHHLPPQNSG*ISVPSVPPTTQDSP
Trigger: CGGGGAGTCCTGAGTTGTTGGTGGGACACTTGGGACAGATATTCATCCAGAATTTTGTGGCGGGAGATGATGAATCCAGAAGTGACCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp CAATACCAATGTTATAGATCAGCCCTGGGCGGTTTCCTTGCTGGATaGCTTTCAAAGCTCGGACACCACTACCACCATCCAGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: QYQCYRSALGGFLAG*LSKLGHHYHHPGRS
Trigger: GCTTCTCCCTGGATGGTGGTAGTGGTGTCCGAGCTTTGAAAGTCATCCAGCAAGGAAACCGCCCAGGGCTGATCTATAACATTGGTATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp AGAAATGTTCCGTTCCCTTCTGGAACTACCCCTGGACTCCCACTGTaGGAGAGTGCAGCTCTGGAACCAAATCAGATGACATCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: RNVPFPSGTTPGLPL*ESAALEPNQMTSAC
Trigger: ACAGGCTGATGTCATCTGATTTGGTTCCAGAGCTGCACTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643711.1
CDS GCA 90 bp GCCAAAAGAGCTTTGCGACAATCATCCATGCTGAATCCCAGCTCCTaGAGCCTAGCCAGCTGTAACTCCAAGACAGGATCTAAGGTGTGT +
Preference number: 5 (lower is better)
Translates to: AKRALRQSSMLNPSS*SLASCNSKTGSKVC
Trigger: ACACACCTTAGATCCTGTCTTGGAGTTACAGCTGGCTAGGCTGCAGGAGCTGGGATTCAGCATGGATGATTGTCGCAAAGCTCTTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp TTTTCAAACACTACCATCAAAGGCCGTCACATTTACACAGTGGACTaGGCACTCTCACATGGCTTGGCACCTTGCTTGGGCCTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: FSNTTIKGRHIYTVD*ALSHGLAPCLGLVC
Trigger: ACAGACCAGGCCCAAGCAAGGTGCCAAGCCATGTGAGAGTGCCCAGTCCACTGTGTAAATGTGACGGCCTTTGATGGTAGTGTTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS CCA 90 bp GTATCTTTTCAAACACTACCATCAAAGGCCGTCACATTTACACAGTaGACTGGGCACTCTCACATGGCTTGGCACCTTGCTTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VSFQTLPSKAVTFTQ*TGHSHMAWHLAWAW
Trigger: CCAGGCCCAAGCAAGGTGCCAAGCCATGTGAGAGTGCCCAGTCCACTGTGTAAATGTGACGGCCTTTGATGGTAGTGTTTGAAAAGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACATTGAGACATTAACTTaGGTGCCACCTATACTTGCA +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHIETLT*VPPILA
Trigger: TGCAAGTATAGGTGGCACCAAAGTTAATGTCTCAAT...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGTACTGTGGTGACTTaGGTGGCTGCGCTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSTVVT*VAALFS
Trigger: GCTGAAAAGCGCAGCCACCAAAGTCACCACAGTACT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTGGGCTCATCCACTGTaGGAGAAGGAGGTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLWAHPL*EKEVGS
Trigger: TGACCCCACCTCCTTCTCCAACAGTGGATGAGCCCA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTGGGCTCATCCACTGTaGGAGAAGGAGGTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: VIEGSLTHTINPSESLIFWAHPL*EKEVGS
Trigger: TGACCCCACCTCCTTCTCCAACAGTGGATGAGCCCA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTTATCACAACCCAGGTTaGCAGTGTGATCAGCACATC +
Preference number: 5 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVYHNPG*QCDQHI
Trigger: GATGTGCTGATCACACTGCAAACCTGGGTTGTGATA...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGGCTCCAACTTCACGTaGTGCAGAATGCCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSGSNFT*CRMPSG
Trigger: TCCTGAGGGCATTCTGCACAACGTGAAGTTGGAGCC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCGGCTCCAACTTCACGTaGTGCAGAATGCCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: CRLSWKSFMLQLISEDPAGSNFT*CRMPSG
Trigger: TCCTGAGGGCATTCTGCACAACGTGAAGTTGGAGCC...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGATGGGTTCTCCCAGGTaGTTCTCTAATAAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALMGSPR*FSNKPR
Trigger: CCGCGGCTTATTAGAGAACAACCTGGGAGAACCCAT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTTCCGTACCTGTTACATaGACCTTGACCTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGSVPVT*TLTSRC
Trigger: GCACCTGGAGGTCAAGGTCAATGTAACAGGTACGGA...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGTTCAGAATAATGGCATaGGTGTCGAAGCAGGACACA +
Preference number: 5 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWFRIMA*VSKQDT
Trigger: TGTGTCCTGCTTCGACACCAATGCCATTATTCTGAA...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp GTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCCCCACCAACTCCATTaGAATTTGTACGGGATCCAC +
Preference number: 5 (lower is better)
Translates to: VARWVRPRHNPMKSWASLPHQLH*NLYGIH
Trigger: GTGGATCCCGTACAAATTCAAATGGAGTTGGTGGGG...AAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGCCATCCACGATTCCTaGGTACTTACATACTGGTCA +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVAIHDS*VLTYWS
Trigger: TGACCAGTATGTAAGTACCAAGGAATCGTGGATGGC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGTTGCCATCCACGATTCCTaGGTACTTACATACTGGTCA +
Preference number: 5 (lower is better)
Translates to: PRHNPMKSWASLQSGAWVAIHDS*VLTYWS
Trigger: TGACCAGTATGTAAGTACCAAGGAATCGTGGATGGC...AACCCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGCCATTTACTCTCACTaGCAGTTGATGAATCCGGAG +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKAIYSH*QLMNPE
Trigger: CTCCGGATTCATCAACTGCAAGTGAGAGTAAATGGC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGACACTGGGCTCACTaGCTCCCAGCCATTTACTCT +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALRHWAH*LPAIYS
Trigger: AGAGTAAATGGCTGGGAGCAAGTGAGCCCAGTGTCT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGGAAGCACCACTGGCTaGTCTGGAGCTGATGGGCTA +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLGSTTG*SGADGL
Trigger: TAGCCCATCAGCTCCAGACAAGCCAGTGGTGCTTCC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATGGAAGCACCACTGGCTaGTCTGGAGCTGATGGGCTA +
Preference number: 5 (lower is better)
Translates to: EILYVAPRRVISTRRKKHGSTTG*SGADGL
Trigger: TAGCCCATCAGCTCCAGACAAGCCAGTGGTGCTTCC...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp GTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTTCACAGGGTAGCAAGTaGCAGATTACCACAGTTGGC +
Preference number: 5 (lower is better)
Translates to: VARWVRPRHNPMKSWASLSQGSK*QITTVG
Trigger: GCCAACTGTGGTAATCTGCAACTTGCTACCCTGTGA...AAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACTGGAAGGAATTATTCTaGTTGACTTCAAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHWKELF*LTSKPP
Trigger: TGGAGGCTTTGAAGTCAACAAGAATAATTCCTTCCA...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAGGGACCTTAGAAAAGTaGTCAATTCGGAAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRGTLEK*SIRKGG
Trigger: TCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCC...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTGCACAGGTAATGGCCTaGTTGGAAGCCACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: VIEGSLTHTINPSESLIFAQVMA*LEATGL
Trigger: CAGGCCTGTGGCTTCCAACAAGGCCATTACCTGTGC...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAACTCCACGTCTGAGTaGTGCTTCGCCTGCGGTCAG +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLNSTSE*CFACGQ
Trigger: CTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAAGCCCTTTTAATTGGTGTTCCACCTaGCTCAGCTGTCTTTTCATG +
Preference number: 5 (lower is better)
Translates to: AKSRAPATGLVTVPTSPFNWCST*LSCLFM
Trigger: CATGAAAAGACAGCTGAGCAAGGTGGAACACCAATT...AAAAGGGCTTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAGATCCAATGGGAGCTaGTTGGAGGTGAACACACTT +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKRSNGS*LEVNTL
Trigger: AAGTGTGTTCACCTCCAACAAGCTCCCATTGGATCT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAGATCCAATGGGAGCTaGTTGGAGGTGAACACACTT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVRSNGS*LEVNTL
Trigger: AAGTGTGTTCACCTCCAACAAGCTCCCATTGGATCT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GAGCACGCAGTAGCTGTCAATGTTCTCCACAGCGATGAAGAATTCGTCCTGTATGTGCTCACGGCTTTCTaGGTCACCTGCACATACACC +
Preference number: 5 (lower is better)
Translates to: EHAVAVNVLHSDEEFVLYVLTAF*VTCTYT
Trigger: GGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCAC...ATACAGGACGAATTCTTCATCGCTGTGGAGAACATTGACAGCTACTGCGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp CAGGCCATGGATGCCGGCTACAAGGTGTTCACCACTTGTGGCTGCATGGTACCTATTTCTTGTGACAACTaGACAGCAAGGACCTCAGAT +
Preference number: 5 (lower is better)
Translates to: QAMDAGYKVFTTCGCMVPISCDN*TARTSD
Trigger: ATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAAT...AGGTACCATGCAGCCACAAGTGGTGAACACCTTGTAGCCGGCATCCATGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp AGCCACGATGTCAAAGGCGTCCCTTTCAGGACCACAGCCCTCACCTCAACCCACCATAGTAGAGGCTCTTaGCGTAGTTTATTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: SHDVKGVPFRTTALTSTHHSRGS*RSLFLV
Trigger: CACAAGAAATAAACTACGCAAAGAGCCTCTACTATG...GTGGGTTGAGGTGAGGGCTGTGGTCCTGAAAGGGACGCCTTTGACATCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCCCGGGGCTTTGTTCTaGGTTGTTGCTGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFPGALF*VVAAQA
Trigger: TGCCTGGGCAGCAACAACCAAGAACAAAGCCCCGGG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGACCGCAGGGGCTTCTaGGAGCAGTTTCTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALDRRGF*EQFLFK
Trigger: TTTGAAGAGAAACTGCTCCAAGAAGCCCCTGCGGTC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCTGCAATCCACTAACTaGGAGTTCAGCAAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKLQSTN*EFSKGN
Trigger: GTTGCCTTTGCTGAACTCCAAGTTAGTGGATTGCAG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGTTTCCTCCAAAGCTTaGGATGTTTTCCTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWVSSKA*DVFLVR
Trigger: TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAAC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCGACACATTTCCTCCTaGTCATCTGTGGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALRHISS*SSVDSR
Trigger: CCTGCTGTCCACAGATGACAAGGAGGAAATGTGTCG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGGTCTGCATCTTCAGCTaGTTATATTGTCTTCGGGCA +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWVCIFS*LYCLRA
Trigger: TGCCCGAAGACAATATAACAAGCTGAAGATGCAGAC...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTGGACATGCTTCCAATaGTCTTTCACTCGTCCAACC +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVWTCFQ*SFTRPT
Trigger: GGTTGGACGAGTGAAAGACAATTGGAAGCATGTCCA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGGACATCAATACAGGTTaGGCTGCTCTTTGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWDINTG*AALCQH
Trigger: ATGCTGACAAAGAGCAGCCAAACCTGTATTGATGTC...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp AACTTGACAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGTGGGAGTGGCACTGTGTGACCTaGGCAGCAGAGTTTGATACT +
Preference number: 5 (lower is better)
Translates to: NLTARTSDFTWTMGFWWEWHCVT*AAEFDT
Trigger: AGTATCAAACTCTGCTGCCAAGGTCACACAGTGCCA...CTCCCACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS TCA 90 bp GCTGTAACTCCAAGACAGGATCTAAGGTGTGTCTTGTCCCTTCTCTaGTTTCCTCTCCAACGCGAGATGCACCTGGAAGGTAAGTGCCAA +
Preference number: 5 (lower is better)
Translates to: AVTPRQDLRCVLSLL*FPLQREMHLEGKCQ
Trigger: TTGGCACTTACCTTCCAGGTGCATCTCGCGTTGGAGAGGAAATCAGAGAAGGGACAAGACACACCTTAGATCCTGTCTTGGAGTTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 90 bp AAATCCTTTCCAGCTCTGGCACTGTGTGACCTTGGCAGCAGAGTTTaGTACTCCGTGTGTAACATTTCTGATGAGGCCCCCGACATTTCC +
Preference number: 5 (lower is better)
Translates to: KSFPALALCDLGSRV*YSVCNISDEAPDIS
Trigger: GGAAATGTCGGGGGCCTCATCAGAAATGTTACACACGGAGTATCAAACTCTGCTGCCAAGGTCACACAGTGCCAGAGCTGGAAAGGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS GCA 90 bp ACTACTATCCTCTGGTGCCTTCGAGTATTCTCTCGGATGTCTCTCTaGAGCAAAGATGTCCATGTCCTGGAGATCCACGACAACGCAATC +
Preference number: 5 (lower is better)
Translates to: TTILWCLRVFSRMSL*SKDVHVLEIHDNAI
Trigger: GATTGCGTTGTCGTGGATCTCCAGGACATGGACATCTTTGCTGCAGAGAGACATCCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp GTGAGTATCATCGAGAAATGTTCCGTTCCCTTCTGGAACTACCCCTaGACTCCCACTGTGAGAGAGTGCAGCTCTGGAACCAAATCAGAT +
Preference number: 5 (lower is better)
Translates to: VSIIEKCSVPFWNYP*TPTVRECSSGTKSD
Trigger: ATCTGATTTGGTTCCAGAGCTGCACTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACATTTCTCGATGATACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643711.1
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGTACAGTTTAATGTCCTaGATTTCCACCTGCAGACGG +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKYSLMS*ISTCRR
Trigger: CCGTCTGCAGGTGGAAATCAAGGACATTAAACTGTA...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATCAGGATATTCCACATaGGACACTGAGGGGCAAGAC +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGASGYST*DTEGQD
Trigger: GTCTTGCCCCTCAGTGTCCAATGTGGAATATCCTGA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCGCAGAGGTGGGCCTTaGATACAACTGGAAGACATT +
Preference number: 5 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFRRGGP*IQLEDI
Trigger: AATGTCTTCCAGTTGTATCAAAGGCCCACCTCTGCG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGAGGTGTGCTACTAATTaGGACACATTTGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWRCATN*DTFALA
Trigger: TGCCAAAGCAAATGTGTCCAAATTAGTAGCACACCT...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTGGGCTCCTCCGTGCTaGTCGTTTTCCTCAGACTGT +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLWAPPC*SFSSDC
Trigger: ACAGTCTGAGGAAAACGACAAGCACGGAGGAGCCCA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTGGACTGAGGAGAGATaGCCATGGATAGATATGTCT +
Preference number: 5 (lower is better)
Translates to: HTGTRKGGNVTFGIGCSLWTEER*PWIDMS
Trigger: AGACATATCTATCCATGGCAATCTCTCCTCAGTCCA...CAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGAAGCCGCGGATCAGCTaGTATTTATACAGATCCAGA +
Preference number: 5 (lower is better)
Translates to: HTGTRKGGNVTFGIGCSLKPRIS*YLYRSR
Trigger: TCTGGATCTGTATAAATACAAGCTGATCCGCGGCTT...CAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAATCTGAATGGACCCTaGGGTGGTGCTGCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGNLNGP*GGAAVL
Trigger: AAGAACAGCAGCACCACCCAAGGGTCCATTCAGATT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAATCTGAATGGACCCTaGGGTGGTGCTGCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGANLNGP*GGAAVL
Trigger: AAGAACAGCAGCACCACCCAAGGGTCCATTCAGATT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCCACTCTTCACAGTTTaGGGAACTATAGCAGATTCG +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKPLFTV*GTIADS
Trigger: CGAATCTGCTATAGTTCCCAAAACTGTGAAGAGTGG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGCCACTCTTCACAGTTTaGGGAACTATAGCAGATTCG +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVPLFTV*GTIADS
Trigger: CGAATCTGCTATAGTTCCCAAAACTGTGAAGAGTGG...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCCTGTTACATTGACCTaGACCTCCAGGTGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALPVTLT*TSRCLS
Trigger: TGAAAGGCACCTGGAGGTCAAGGTCAATGTAACAGG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGGTACGGGATCCACAATaGAAAGAGCTGTATCATGCT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVVRDPQ*KELYHA
Trigger: AGCATGATACAGCTCTTTCAATTGTGGATCCCGTAC...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGGTACGGGATCCACAATaGAAAGAGCTGTATCATGCT +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKVRDPQ*KELYHA
Trigger: AGCATGATACAGCTCTTTCAATTGTGGATCCCGTAC...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CACACTGGAACCAGGAAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGGTACGGGATCCACAATaGAAAGAGCTGTATCATGCT +
Preference number: 5 (lower is better)
Translates to: HTGTRKGGNVTFGIGCSLVRDPQ*KELYHA
Trigger: AGCATGATACAGCTCTTTCAATTGTGGATCCCGTAC...CAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTTCCTGGTTCCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCCCCACCAACTCCATTaGAATTTGTACGGGATCCAC +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALPHQLH*NLYGIH
Trigger: GTGGATCCCGTACAAATTCAAATGGAGTTGGTGGGG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACACTGCAGCATTAGCTaGCTCTGGGATGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAHCSIS*LWDGFC
Trigger: GCAAAATCCATCCCAGAGCAAGCTAATGCTGCAGTG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTCACGCCAAAAGAGCTTaGCGACAATCATCCATGCTG +
Preference number: 5 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGHAKRA*RQSSML
Trigger: CAGCATGGATGATTGTCGCAAAGCTCTTTTGGCGTG...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGCTTTTTCAATTGGCCTaGACACGCCAAAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWLFQLA*TRQKSF
Trigger: AAAGCTCTTTTGGCGTGTCAAGGCCAATTGAAAAAG...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAATGGCTGCCGGCGCTaGGGGGTTTTCACCTCTCTA +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFNGCRR*GVFTSL
Trigger: TAGAGAGGTGAAAACCCCCAAGCGCCGGCAGCCATT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000011700.10
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGGAAGCACCACTGGCTaGTCTGGAGCTGATGGGCTA +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFGSTTG*SGADGL
Trigger: TAGCCCATCAGCTCCAGACAAGCCAGTGGTGCTTCC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATCACAGGGTAGCAAGTaGCAGATTACCACAGTTGGC +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGASQGSK*QITTVG
Trigger: GCCAACTGTGGTAATCTGCAACTTGCTACCCTGTGA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTCACAGGGTAGCAAGTaGCAGATTACCACAGTTGGC +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGSQGSK*QITTVG
Trigger: GCCAACTGTGGTAATCTGCAACTTGCTACCCTGTGA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAGTGGCAACCCTGTTTaGTTAATCAGCCAATATGGA +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWSGNPV*LISQYG
Trigger: TCCATATTGGCTGATTAACAAAACAGGGTTGCCACT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCAGGTAATGGCCTTGTaGGAAGCCACAGGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFQVMAL*EATGLP
Trigger: AGGCAGGCCTGTGGCTTCCAACAAGGCCATTACCTG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTGCACAGGTAATGGCCTaGTTGGAAGCCACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFAQVMA*LEATGL
Trigger: CAGGCCTGTGGCTTCCAACAAGGCCATTACCTGTGC...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAATTGGTGTTCCACCTaGCTCAGCTGTCTTTTCATG +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVNWCST*LSCLFM
Trigger: CATGAAAAGACAGCTGAGCAAGGTGGAACACCAATT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAATTCGTCCTGTATGTaGTCTGTGAGTTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWNSSCM*SVSLKS
Trigger: GCTCTTCAAACTCACAGACAACATACAGGACGAATT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAACAGTCCCGGGGCTTaGTTCTTGGTTGTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLNSPGA*FLVVAA
Trigger: GGCAGCAACAACCAAGAACAAAGCCCCGGGACTGTT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAGAGGAGCTGCCATCTaGTGCAGTGCTGTATCCTGC +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLRGAAI*CSAVSC
Trigger: GCAGGATACAGCACTGCACAAGATGGCAGCTCCTCT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCAAATGTCAAAGTGCTaGGTTGTGCAATCACAGGAG +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKQMSKC*VVQSQE
Trigger: CTCCTGTGATTGCACAACCAAGCACTTTGACATTTG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAGACACTCTTGGGATTaGGGGAAGGGGCCGCTTGTC +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFRHSWD*GKGPLV
Trigger: GACAAGCGGCCCCTTCCCCAAATCCCAAGAGTGTCT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCCGAACCCTCTGTGCTaGAGTCCTAAAATGTCATGC +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALPNPLC*SPKMSC
Trigger: GCATGACATTTTAGGACTCAAGCACAGAGGGTTCGG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAATTCAACAGCACCTTaGAGAAGTGCAACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVNSTAP*RSATES
Trigger: GCTCTCAGTTGCACTTCTCAAAGGTGCTGTTGAATT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCCCGAAGGCTTCCCGTaGGAATATCAAAGCTCAAGT +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALPEGFP*EYQSSS
Trigger: ACTTGAGCTTTGATATTCCAACGGGAAGCCTTCGGG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGAGACTGGTAAGTTCCTaGTTCTCTGAAGCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWRLVSS*FSEASF
Trigger: GAAAGAAGCTTCAGAGAACAAGGAACTTACCAGTCT...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp TGCAGACGGTCACTTCTGGATTCATCATCTCCCGCCACAAAATTCTaGATGAATATCTGTCCCAAGTGTCCCACCAACAACTCAGGACTC +
Preference number: 5 (lower is better)
Translates to: CRRSLLDSSSPATKF*MNICPKCPTNNSGL
Trigger: GAGTCCTGAGTTGTTGGTGGGACACTTGGGACAGATATTCATCCAGAATTTTGTGGCGGGAGATGATGAATCCAGAAGTGACCGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp TTCACTAACATTGTGAGTATCATCGAGAAATGTTCCGTTCCCTTCTaGAACTACCCCTGGACTCCCACTGTGAGAGAGTGCAGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: FTNIVSIIEKCSVPF*NYPWTPTVRECSSG
Trigger: ACCAGAGCTGCACTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACATTTCTCGATGATACTCACAATGTTAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp TTCACTAACATTGTGAGTATCATCGAGAAATGTTCCGTTCCCTTCTaGAACTACCCCTGGACTCCCACTGTGAGAGAGTGCAGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: FTNIVSIIEKCSVPF*NYPWTPTVRECSSG
Trigger: TCCAGAGCTGCACTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACATTTCTCGATGATACTCACAATGTTAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643711.1
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCTATACTCGGCAGTCTaGGTAGCTAGTACTGTGGTG +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSLYSAV*VASTVV
Trigger: CACCACAGTACTAGCTACCAAGACTGCCGAGTATAG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGTTCCCGAGTCTTCCTaGGAGTTTCAAAGAGCGATA +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGVPESS*EFQRAI
Trigger: TATCGCTCTTTGAAACTCCAAGGAAGACTCGGGAAC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGCAGGATGTGAAAAGCTaGACCTCTATGCAAAGATTC +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKQDVKS*TSMQRF
Trigger: GAATCTTTGCATAGAGGTCAAGCTTTTCACATCCTG...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCGCAGAGGTGGGCCTTaGATACAACTGGAAGACATT +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSRRGGP*IQLEDI
Trigger: AATGTCTTCCAGTTGTATCAAAGGCCCACCTCTGCG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTATCACAACCCAGGTTaGCAGTGTGATCAGCACATC +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGYHNPG*QCDQHI
Trigger: GATGTGCTGATCACACTGCAAACCTGGGTTGTGATA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCTTGGACACATTTGCTTaGGCAAGCTCACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: CRLSWKSFMLQLISEDPALDTFA*ASSLVV
Trigger: GACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCAA...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAGGTGTGCTACTAATTaGGACACATTTGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKRCATN*DTFALA
Trigger: TGCCAAAGCAAATGTGTCCAAATTAGTAGCACACCT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACTGGGCTCCTCCGTGCTaGTCGTTTTCCTCAGACTGT +
Preference number: 5 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNWAPPC*SFSSDC
Trigger: ACAGTCTGAGGAAAACGACAAGCACGGAGGAGCCCA...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTGTGGGTTGCGGCCCTaGCTGCTTGGTGGAGGTACT +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSCGLRP*LLGGGT
Trigger: AGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACATGGACTACTGGACTCTaGGCCAACAGACAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTWTTGL*ANRQCG
Trigger: CCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCCA...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAAGCAGGAGGAATCCTaGGTAGATCTGAAATGTAGT +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKKQEES*VDLKCS
Trigger: ACTACATTTCAGATCTACCAAGGATTCCTCCTGCTT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAAGCAGGAGGAATCCTaGGTAGATCTGAAATGTAGT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVKQEES*VDLKCS
Trigger: ACTACATTTCAGATCTACCAAGGATTCCTCCTGCTT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGGAAGGGAAGACCGCTaGGTAACTACTCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLGREDR*VTTPLF
Trigger: GAAGAGTGGAGTAGTTACCAAGCGGTCTTCCCTTCC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCCCCACCAACTCCATTaGAATTTGTACGGGATCCAC +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSPHQLH*NLYGIH
Trigger: GTGGATCCCGTACAAATTCAAATGGAGTTGGTGGGG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGACAAGGGGGAGGCTTaGTCCAAAACATGGAGGATC +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLDKGEA*SKTWRI
Trigger: GATCCTCCATGTTTTGGACAAAGCCTCCCCCTTGTC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000011700.10
ENST00000620676.6
CDS-3UTR CAA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTTACTCTCACTTGCAGTaGATGAATCCGGAGGTCATG +
Preference number: 5 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGYSHLQ*MNPEVM
Trigger: CATGACCTCCGGATTCATCAACTGCAAGTGAGAGTA...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTGGAGAGCTGCCTCCTaGCCAGGTTTCAGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSWRAAS*PGFSVP
Trigger: TGGGACGCTGAAACCTGGCAAGGAGGCAGCTCTCCA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCCTGCAGCATCTGTCTaGGCATTGTCCTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLPAASV*ALSCLK
Trigger: CTTCAGACAGGACAATGCCAAGACAGATGCTGCAGG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTCATCGTGCAGAGGTTaGGCTGCTCTTTGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSSCRG*AALCQH
Trigger: ATGCTGACAAAGAGCAGCCAAACCTCTGCACGATGA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTGGAAGGAATTATTCTaGTTGACTTCAAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWWKELF*LTSKPP
Trigger: TGGAGGCTTTGAAGTCAACAAGAATAATTCCTTCCA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTTGATTAATAAATTGTaGTTCAGGTGGAACTGGCCC +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWLINKL*FRWNWP
Trigger: GGGCCAGTTCCACCTGAACAACAATTTATTAATCAA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCTTCACTGCGTTGACTaGCACAGCTGGGCCGGTCTC +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSLHCVD*HSWAGL
Trigger: GAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGGGAACTTCACTGCGTaGACTTGCACAGCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSGNFTA*TCTAGP
Trigger: CGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCCC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AATGATACCATGAGCCAGGCCATGGATGCCGGCTACAAGGTGTTCACCACTTGTCAAAGTAGTATCGAATaGGTGTTCCACCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: NDTMSQAMDAGYKVFTTCQSSIE*VFHLAQ
Trigger: CTGAGCAAGGTGGAACACCAATTCGATACTACTTTG...ACAAGTGGTGAACACCTTGTAGCCGGCATCCATGGCCTGGCTCATGGTATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp GAATTCGTCCTGTATGTTGTCTGTGAGTTTGAAGAGCTGCTCCTGTCCTTCCGCAGATCCAATGGGAGCTaGTTGGAGGTGAACACACTT +
Preference number: 5 (lower is better)
Translates to: EFVLYVVCEFEELLLSFRRSNGS*LEVNTL
Trigger: AAGTGTGTTCACCTCCAACAAGCTCCCATTGGATCT...GCGGAAGGACAGGAGCAGCTCTTCAAACTCACAGACAACATACAGGACGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp GTGAGAACCAGGAGGGGATGTCAAATGCCCCTGAAACCTTCTGGCCTTGTCTGGTCCTCCTGGAAATGTTaGAGGATATCATTGATGATG +
Preference number: 5 (lower is better)
Translates to: VRTRRGCQMPLKPSGLVWSSWKC*RISLMM
Trigger: CATCATCAATGATATCCTCAAACATTTCCAGGAGGA...CCAGACAAGGCCAGAAGGTTTCAGGGGCATTTGACATCCCCTCCTGGTTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGATGTTGTCTGTGAGTTaGAAGAGCTGCTCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALMLSVS*KSCSCP
Trigger: AGGACAGGAGCAGCTCTTCAAACTCACAGACAACAT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGTGTCCCCTCGGGCTGTGGAGCTACGATGCCTGCCTGTGGCTTTATTAAAAAGAATTCGTCCTGTATGTaGTCTGTGAGTTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: CVPSGCGATMPACGFIKKNSSCM*SVSLKS
Trigger: GCTCTTCAAACTCACAGACAACATACAGGACGAATT...CTTTTTAATAAAGCCACAGGCAGGCATCGTAGCTCCACAGCCCGAGGGGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAATTCGTCCTGTATGTaGTCTGTGAGTTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVNSSCM*SVSLKS
Trigger: GCTCTTCAAACTCACAGACAACATACAGGACGAATT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAAAGGATGGGAGGGATaGGTGACACCATCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALKGWEG*VTPSSK
Trigger: CTTTGAAGATGGTGTCACCAATCCCTCCCATCCTTT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGAGGAATTCCATGATTaGCCGGTATTGCAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAEEFHD*PVLQLR
Trigger: TCTCAGCTGCAATACCGGCAAATCATGGAATTCCTC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTTAGATATCGCCACCTaGGGTTTCCACCTTCGGAAC +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSLDIAT*GFHLRN
Trigger: GTTCCGAAGGTGGAAACCCAAGGTGGCGATATCTAA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCTGCAATCCACTAACTaGGAGTTCAGCAAAGGCAAC +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLQSTN*EFSKGN
Trigger: GTTGCCTTTGCTGAACTCCAAGTTAGTGGATTGCAG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAGGGACTGGGTAGCTTaGGATATCTCCTTACCCAAT +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGRDWVA*DISLPN
Trigger: ATTGGGTAAGGAGATATCCAAAGCTACCCAGTCCCT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAGGAGTTCCTTGCTCCTaGTGTAACAGAGTCACTGTA +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAGVPCS*CNRVTV
Trigger: TACAGTGACTCTGTTACACAAGGAGCAAGGAACTCC...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTCAGCTTGTTATATaGTCTTCGGGCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGLQLVI*SSGSFS
Trigger: GCTGAAGCTGCCCGAAGACAATATAACAAGCTGAAG...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACTTCAGCTTGTTATATaGTCTTCGGGCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGALQLVI*SSGSFS
Trigger: GCTGAAGCTGCCCGAAGACAATATAACAAGCTGAAG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACAAACGATCAAGAGTTaGCCGGATTTCTGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAQTIKS*PDFCLG
Trigger: ACCAAGGCAGAAATCCGGCAAACTCTTGATCGTTTG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCATGGACATGCTTCCAATaGTCTTTCACTCGTCCAACC +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAWTCFQ*SFTRPT
Trigger: GGTTGGACGAGTGAAAGACAATTGGAAGCATGTCCA...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTTGGTACCAAACACCTaGAGCACAGAAATGTACCGG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLVPNT*STEMYR
Trigger: CCGGTACATTTCTGTGCTCAAGGTGTTTGGTACCAA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GAGCCAGGGGCAGGGCCTGTTTCCTCCAAAGCTTTGGATGTTTTCCTGGTGAGAAGGGACTCTTGCTCTTaGGTAAGAATTTTGTCAAGT +
Preference number: 5 (lower is better)
Translates to: EPGAGPVSSKALDVFLVRRDSCS*VRILSS
Trigger: ACTTGACAAAATTCTTACCAAAGAGCAAGAGTCCCT...TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAACAGGCCCTGCCCCTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp GCCGCGGATCAGCTTGTATTTATACAGATCCAGAGAGCAGTGGACTaGGGAGAGATTGCCATGGATAGATATGTCTGGCACAGTATGACT +
Preference number: 5 (lower is better)
Translates to: AADQLVFIQIQRAVD*GEIAMDRYVWHSMT
Trigger: AGTCATACTGTGCCAGACATATCTATCCATGGCAATCTCTCCTCAGTCCACTGCTCTCTGGATCTGTATAAATACAAGCTGATCCGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 90 bp TTTCTGCAGCTCTTGTTCGGTGACAGGAAGTTCATCCACTTCATATaGACGGCTGCTTTTCCGGTGGCAGAAATCTGTTATCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: FLQLLFGDRKFIHFI*TAAFPVAEICYLEC
Trigger: GCACTCCAGATAACAGATTTCTGCCACCGGAAAAGCAGCCGTTCATATGAAGTGGATGAACTTCCTGTCACCGAACAAGAGCTGCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS GCA 90 bp AACTTCTCTACCACATGTGTTGGTCCCACGTCAATATCCTGGACATaGTTCCAATTGTCTTTCACTCGTCCAACCATGATCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: NFSTTCVGPTSISWT*FQLSFTRPTMIWRS
Trigger: GGACCTCCAGATCATGGTTGGACGAGTGAAAGACAATTGGAAGCATGTCCAGGATATTGACGTGGGACCAACACATGTGGTAGAGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp ACCACTGGCTCTGCCACAGAAATAAGGGTTAACACTTTCAGGCAATaGTCCTCCACCCCAAAGATTGACCATCTCAGGACAAAAGAAGAC +
Preference number: 5 (lower is better)
Translates to: TTGSATEIRVNTFRQ*SSTPKIDHLRTKED
Trigger: GTCTTCTTTTGTCCTGAGATGGTCAATCTTTGGGGTGGAGGACCATTGCCTGAAAGTGTTAACCCTTATTTCTGTGGCAGAGCCAGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460333.5
CDS CCA 90 bp CTGGCCTGCAGCATCTGTCTTGGCATTGTCCTGTCTGAAGATCAGTaGCAACCCTTTAGGAAGGAGAGAAAAGTTTACATCAATACCACC +
Preference number: 5 (lower is better)
Translates to: LACSICLGIVLSEDQ*QPFRKERKVYINTT
Trigger: GGTGGTATTGATGTAAACTTTTCTCTCCTTCCTAAAGGGTTGCCACTGATCTTCAGACAGGACAATGCCAAGACAGATGCTGCAGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646411.1
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAGTACTGTGGTGACTTaGGTGGCTGCGCTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFSTVVT*VAALFS
Trigger: GCTGAAAAGCGCAGCCACCAAAGTCACCACAGTACT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTACAGTTTAATGTCCTaGATTTCCACCTGCAGACGG +
Preference number: 5 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFYSLMS*ISTCRR
Trigger: CCGTCTGCAGGTGGAAATCAAGGACATTAAACTGTA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTACAGTTTAATGTCCTaGATTTCCACCTGCAGACGG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALYSLMS*ISTCRR
Trigger: CCGTCTGCAGGTGGAAATCAAGGACATTAAACTGTA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCTTTCCAACAAGTATCTaGGGCTCATCCACTGTTGGA +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGFPTSI*GSSTVG
Trigger: TCCAACAGTGGATGAGCCCAAGATACTTGTTGGAAA...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCTAATTTGGACACATTaGCTTTGGCAAGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLIWTH*LWQAHW
Trigger: CCAGTGAGCTTGCCAAAGCAAATGTGTCCAAATTAG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACTAATTTGGACACATTaGCTTTGGCAAGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGALIWTH*LWQAHW
Trigger: CCAGTGAGCTTGCCAAAGCAAATGTGTCCAAATTAG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTGTGGGTTGCGGCCCTaGCTGCTTGGTGGAGGTACT +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPCGLRP*LLGGGT
Trigger: AGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp ATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGAAACAGACAGTGTGGGTaGCGGCCCTTGCTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: IKLPIILEIIHVAVDLRGNRQCG*RPLLLG
Trigger: ACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTT...TCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTATGGGTTCTCCCAGGTaGTTCTCTAATAAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFMGSPR*FSNKPR
Trigger: CCGCGGCTTATTAGAGAACAACCTGGGAGAACCCAT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTCAGTCCGGAGCCTGGACCAAGTTAATGGACTaGGTTTGGTTGGAAAAACTT +
Preference number: 5 (lower is better)
Translates to: RPRHNPMKSWASLQSGAWTKLMD*VWLEKL
Trigger: AAGTTTTTCCAACCAAACCAAGTCCATTAACTTGGT...CCAGGCTCCGGACTGAAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACAGGAAGGGAAGACCGCTaGGTAACTACTCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTGREDR*VTTPLF
Trigger: GAAGAGTGGAGTAGTTACCAAGCGGTCTTCCCTTCC...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTCCGTACCTGTTACATaGACCTTGACCTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFSVPVT*TLTSRC
Trigger: GCACCTGGAGGTCAAGGTCAATGTAACAGGTACGGA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTCCCCACCAACTCCATTaGAATTTGTACGGGATCCAC +
Preference number: 5 (lower is better)
Translates to: VIEGSLTHTINPSESLIFPHQLH*NLYGIH
Trigger: GTGGATCCCGTACAAATTCAAATGGAGTTGGTGGGG...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTCACTGCAGCATTAGCTaGCTCTGGGATGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: VIEGSLTHTINPSESLIFHCSIS*LWDGFC
Trigger: GCAAAATCCATCCCAGAGCAAGCTAATGCTGCAGTG...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AAGGGTGGAAATGTAACCTTCGGGATTGGCTGTTCCCTGTCCCCTGGCAAATTCCTTTTTCAATTGGCCTaGACACGCCAAAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: KGGNVTFGIGCSLSPGKFLFQLA*TRQKSF
Trigger: AAAGCTCTTTTGGCGTGTCAAGGCCAATTGAAAAAG...GAATTTGCCAGGGGACAGGGAACAGCCAATCCCGAAGGTTACATTTCCACCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCACACACTCTCAGCTTaGATCTCCACGCCAGAGATC +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFHTLSA*ISTPEI
Trigger: GATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGTG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACGACAAGGGGGAGGCTTaGTCCAAAACATGGAGGATC +
Preference number: 5 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNDKGEA*SKTWRI
Trigger: GATCCTCCATGTTTTGGACAAAGCCTCCCCCTTGTC...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGCCATTTACTCTCACTaGCAGTTGATGAATCCGGAG +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSAIYSH*QLMNPE
Trigger: CTCCGGATTCATCAACTGCAAGTGAGAGTAAATGGC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACAAGACACTGGGCTCACTaGCTCCCAGCCATTTACTCT +
Preference number: 5 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTRHWAH*LPAIYS
Trigger: AGAGTAAATGGCTGGGAGCAAGTGAGCCCAGTGTCT...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTCACAGGGTAGCAAGTaGCAGATTACCACAGTTGGC +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSQGSK*QITTVG
Trigger: GCCAACTGTGGTAATCTGCAACTTGCTACCCTGTGA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTTCTCACCATATAGTTTaGGGTTCCAGGTGGAATGAG +
Preference number: 5 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFSHHIV*GSRWNE
Trigger: CTCATTCCACCTGGAACCCAAAACTATATGGTGAGA...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTCATCGTGCAGAGGTTaGGCTGCTCTTTGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSSCRG*AALCQH
Trigger: ATGCTGACAAAGAGCAGCCAAACCTCTGCACGATGA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCGACCTCGGCCTTTCTaGACATCAATACCAATGTTA +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALRPRPF*TSIPML
Trigger: TAACATTGGTATTGATGTCAAGAAAGGCCGAGGTCG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGGACCTTAGAAAAGTaGTCAATTCGGAAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGTLEK*SIRKGG
Trigger: TCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGATGACTCTTTGTGTCTaGGGTGAGACATCCAAAACG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALMTLCV*GETSKT
Trigger: CGTTTTGGATGTCTCACCCAAGACACAAAGAGTCAT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACATTGATTAATAAATTGTaGTTCAGGTGGAACTGGCCC +
Preference number: 5 (lower is better)
Translates to: VSDAKSRAPATGLVTVPTLINKL*FRWNWP
Trigger: GGGCCAGTTCCACCTGAACAACAATTTATTAATCAA...TGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGGAACTTCACTGCGTaGACTTGCACAGCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGNFTA*TCTAGP
Trigger: CGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCCC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGCTGTCTGAATACAATTGGTGTTCCACCTaGCTCAGCTGTCTTTTCATG +
Preference number: 5 (lower is better)
Translates to: SSYFSTSGRQAPKWLSEYNWCST*LSCLFM
Trigger: CATGAAAAGACAGCTGAGCAAGGTGGAACACCAATT...GTATTCAGACAGCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTCCAATGGGAGCTTGTaGGAGGTGAACACACTTAGC +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLSNGSL*EVNTLS
Trigger: GCTAAGTGTGTTCACCTCCAACAAGCTCCCATTGGA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCACTTACAATGCTGACTaGCACCCATGTGGTAATGGA +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGTYNAD*HPCGNG
Trigger: TCCATTACCACATGGGTGCAAGTCAGCATTGTAAGT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGTGGATTTCTGATTTGTaGCAACAGTTCAATGGGACT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVWISDL*QQFNGT
Trigger: AGTCCCATTGAACTGTTGCAACAAATCAGAAATCCA...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGGGCTTTGTTCTTGGTaGTTGCTGCCCAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSGLCSW*LLPRQE
Trigger: CTCCTGCCTGGGCAGCAACAACCAAGAACAAAGCCC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGAGGAATTCCATGATTaGCCGGTATTGCAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSEEFHD*PVLQLR
Trigger: TCTCAGCTGCAATACCGGCAAATCATGGAATTCCTC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCGCCCTAGGTGGTCTTaGGATTCCATTTTAACATCT +
Preference number: 5 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFRPRWS*DSILTS
Trigger: AGATGTTAAAATGGAATCCAAAGACCACCTAGGGCG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACGCCCTAGGTGGTCTTaGGATTCCATTTTAACATCT +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGARPRWS*DSILTS
Trigger: AGATGTTAAAATGGAATCCAAAGACCACCTAGGGCG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGGTTTCCTCCAAAGCTTaGGATGTTTTCCTGGTGAGA +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALVSSKA*DVFLVR
Trigger: TCTCACCAGGAAAACATCCAAAGCTTTGGAGGAAAC...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAGCTACTATGGTATTTaGAGGCCCAGATCATACTTA +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVSYYGI*RPRSYL
Trigger: TAAGTATGATCTGGGCCTCAAAATACCATAGTAGCT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTTAATGGCCTGCGGATaGTATATGATGTTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALLMACG*YMMFKG
Trigger: GCCCTTGAACATCATATACAATCCGCAGGCCATTAA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGTCTGCATCTTCAGCTaGTTATATTGTCTTCGGGCA +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGVCIFS*LYCLRA
Trigger: TGCCCGAAGACAATATAACAAGCTGAAGATGCAGAC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCAAACGATCAAGAGTTaGCCGGATTTCTGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSQTIKS*PDFCLG
Trigger: ACCAAGGCAGAAATCCGGCAAACTCTTGATCGTTTG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAGGGACTCTTGCTCTTaGGTAAGAATTTTGTCAAGT +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVRDSCS*VRILSS
Trigger: ACTTGACAAAATTCTTACCAAAGAGCAAGAGTCCCT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp GAAAAGCTTGACCTCTATGCAAAGATTCAAAGAAATCATGTCGTGTaGAATGAGCTTCCTCCTGACTGTTGGCACTGCCAGACCCGGAAG +
Preference number: 5 (lower is better)
Translates to: EKLDLYAKIQRNHVV*NELPPDCWHCQTRK
Trigger: CTTCCGGGTCTGGCAGTGCCAACAGTCAGGAGGAAGCTCATTTCACACGACATGATTTCTTTGAATCTTTGCATAGAGGTCAAGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp GTCACTGTACCTCGCTGCAACTGCAAATTCAGTTTGGCAAAGACATaGTCTCGCTTTGTATACGTGTTCATACACGAGGCATCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: VTVPRCNCKFSLAKT*SRFVYVFIHEASAV
Trigger: CACTGCAGATGCCTCGTGTATGAACACGTATACAAAGCGAGATCATGTCTTTGCCAAACTGAATTTGCAGTTGCAGCGAGGTACAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp GGGGGTCTTATATTCATCATCACTAAACTGGGTCTCTTCAGATGCTaGCCCATCCCTACTTTTCCTCCTGGAGTTATCTTGGGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: GGLIFIITKLGLFRC*PIPTFPPGVILGVR
Trigger: ACGAACACCCAAGATAACTCCAGGAGGAAAAGTAGGGATGGGTCAGCATCTGAAGAGACCCAGTTTAGTGATGATGAATATAAGACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp CACAAAATAGGAAGGGAAGATCAGATCTCCACTACTATCCTCTGGTaGCTTCGAGTATTCTCTCGGATGTCTCTCTGCAGCAAAGATGTC +
Preference number: 5 (lower is better)
Translates to: HKIGREDQISTTILW*LRVFSRMSLCSKDV
Trigger: GACATCTTTGCTGCAGAGAGACATCCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGTGGAGATCTGATCTTCCCTTCCTATTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 90 bp TGGCAAAAGGCAGAGCCCCAGATTCCTAGAGCATGGCTTTCTTCCTaGTTTGTCATCACATTTCATACTCACAGGCTCATTCACAGCATT +
Preference number: 5 (lower is better)
Translates to: WQKAEPQIPRAWLSS*FVITFHTHRLIHSI
Trigger: AATGCTGTGAATGAGCCTGTGAGTATGAAATGTGATGACAAAGCAGGAAGAAAGCCATGCTCTAGGAATCTGGGGCTCTGCCTTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476169.1
CDS GCA 90 bp TCACGAGCGCGGTGCAACATAAAGTCCCAGGTGCAACGTTTCCTCTaGTCTCTGATCTCATACAAGTTAGCATTCAAAGCAAAATACCAC +
Preference number: 5 (lower is better)
Translates to: SRARCNIKSQVQRFL*SLISYKLAFKAKYH
Trigger: GTGGTATTTTGCTTTGAATGCTAACTTGTATGAGATCAGAGAGCAGAGGAAACGTTGCACCTGGGACTTTATGTTGCACCGCGCTCGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp CTTTCCAACAAGTATCTTGGGCTCATCCACTGTTGGAGAAGGAGGTaGGGTCAAGGGATAGTCCTTGTCTTGGACTTCCTTTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: LSNKYLGLIHCWRRR*GQGIVLVLDFLLLF
Trigger: AAAAAGCAAAAGGAAGTCCAAGACAAGGACTATCCCTTGACCCCACCTCCTTCTCCAACAGTGGATGAGCCCAAGATACTTGTTGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp TCGCACAAAATAGGAAGGGAAGATCAGATCTCCACTACTATCCTCTaGTGCCTTCGAGTATTCTCTCGGATGTCTCTCTGCAGCAAAGAT +
Preference number: 5 (lower is better)
Translates to: SHKIGREDQISTTIL*CLRVFSRMSLCSKD
Trigger: ATCTTTGCTGCAGAGAGACATCCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGTGGAGATCTGATCTTCCCTTCCTATTTTGTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp CTGGCCTGCAGCATCTGTCTTGGCATTGTCCTGTCTGAAGATCAGTaGCAACCCTGTTTTGTTAATCAGCCAATATGGAGCAGAAATGAA +
Preference number: 5 (lower is better)
Translates to: LACSICLGIVLSEDQ*QPCFVNQPIWSRNE
Trigger: TTCATTTCTGCTCCATATTGGCTGATTAACAAAACAGGGTTGCCACTGATCTTCAGACAGGACAATGCCAAGACAGATGCTGCAGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 90 bp AATCACCCACTAGCAAACGATCAAGAGTTTGCCGGATTTCTGCCTTaGTCTGCATCTTCAGCTTGTTATATTGTCTTCGGGCAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: NHPLANDQEFAGFLP*SASSACYIVFGQLQ
Trigger: CTGAAGCTGCCCGAAGACAATATAACAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGCAAACTCTTGATCGTTTGCTAGTGGGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp ACGTTGAACTTCTCTACCACATGTGTTGGTCCCACGTCAATATCCTaGACATGCTTCCAATTGTCTTTCACTCGTCCAACCATGATCTGG +
Preference number: 5 (lower is better)
Translates to: TLNFSTTCVGPTSIS*TCFQLSFTRPTMIW
Trigger: CCAGATCATGGTTGGACGAGTGAAAGACAATTGGAAGCATGTCCAGGATATTGACGTGGGACCAACACATGTGGTAGAGAAGTTCAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGTTCCCGAGTCTTCCTaGGAGTTTCAAAGAGCGATA +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLVPESS*EFQRAI
Trigger: TATCGCTCTTTGAAACTCCAAGGAAGACTCGGGAAC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGCTCATATACATGCTTaGCTAACACCACCTGAACTG +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSAHIHA*LTPPEL
Trigger: CAGTTCAGGTGGTGTTAGCAAAGCATGTATATGAGC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTCACTGTACACGAGATaGTCCAGGGTTTGTAAAACC +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSLYTR*SRVCKT
Trigger: GGTTTTACAAACCCTGGACAATCTCGTGTACAGTGA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTCAGGATATTCCACATaGGACACTGAGGGGCAAGAC +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFSGYST*DTEGQD
Trigger: GTCTTGCCCCTCAGTGTCCAATGTGGAATATCCTGA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCGCAGAGGTGGGCCTTaGATACAACTGGAAGACATT +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFRRGGP*IQLEDI
Trigger: AATGTCTTCCAGTTGTATCAAAGGCCCACCTCTGCG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCGGGATAGTCCTTGTCTaGGACTTCCTTTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGGIVLV*DFLLLF
Trigger: AAAAAGCAAAAGGAAGTCCAAGACAAGGACTATCCC...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTTTCCAACAAGTATCTaGGGCTCATCCACTGTTGGA +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSFPTSI*GSSTVG
Trigger: TCCAACAGTGGATGAGCCCAAGATACTTGTTGGAAA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTATCACAACCCAGGTTaGCAGTGTGATCAGCACATC +
Preference number: 5 (lower is better)
Translates to: VIEGSLTHTINPSESLIFYHNPG*QCDQHI
Trigger: GATGTGCTGATCACACTGCAAACCTGGGTTGTGATA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp ATAATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGACAGGAGGCAGCCTCATaGCGTGGTTGTCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: IIKLPIILEIIHVAVDLRQEAAS*RGCLQW
Trigger: CCACTGCAGACAACCACGCAATGAGGCTGCCTCCTG...TCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGGTGTGCTACTAATTaGGACACATTTGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALRCATN*DTFALA
Trigger: TGCCAAAGCAAATGTGTCCAAATTAGTAGCACACCT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTGGGCTCCTCCGTGCTaGTCGTTTTCCTCAGACTGT +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSWAPPC*SFSSDC
Trigger: ACAGTCTGAGGAAAACGACAAGCACGGAGGAGCCCA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAACAGACAGTGTGGGTaGCGGCCCTTGCTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPNRQCG*RPLLLG
Trigger: ACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAAGCAGGAGGAATCCTaGGTAGATCTGAAATGTAGT +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGKQEES*VDLKCS
Trigger: ACTACATTTCAGATCTACCAAGGATTCCTCCTGCTT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTTCCAGGTGCCTTTCATaGGACACAGGAAGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: SVSLNEILYVAPRRVISTSRCLS*DTGRED
Trigger: GTCTTCCCTTCCTGTGTCCAATGAAAGGCACCTGGA...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCACGCCAAAAGAGCTTaGCGACAATCATCCATGCTG +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFHAKRA*RQSSML
Trigger: CAGCATGGATGATTGTCGCAAAGCTCTTTTGGCGTG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCACTTTTTCAATTGGCCTaGACACGCCAAAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGALFQLA*TRQKSF
Trigger: AAAGCTCTTTTGGCGTGTCAAGGCCAATTGAAAAAG...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTGCTGCCTTTTTCAATaGGCCTTGACACGCCAAAAG +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLCCLFQ*ALTRQK
Trigger: CTTTTGGCGTGTCAAGGCCAATTGAAAAAGGCAGCA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGCCATCCACGATTCCTaGGTACTTACATACTGGTCA +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLAIHDS*VLTYWS
Trigger: TGACCAGTATGTAAGTACCAAGGAATCGTGGATGGC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTACTCTCACTTGCAGTaGATGAATCCGGAGGTCATG +
Preference number: 5 (lower is better)
Translates to: VIEGSLTHTINPSESLIFYSHLQ*MNPEVM
Trigger: CATGACCTCCGGATTCATCAACTGCAAGTGAGAGTA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp ATAATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGATGGAGAGCTGCCTCCTaGCCAGGTTTCAGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: IIKLPIILEIIHVAVDLRWRAAS*PGFSVP
Trigger: TGGGACGCTGAAACCTGGCAAGGAGGCAGCTCTCCA...TCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGTGGCAACCCTGTTTaGTTAATCAGCCAATATGGA +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSGNPV*LISQYG
Trigger: TCCATATTGGCTGATTAACAAAACAGGGTTGCCACT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GATCTCAGAGGACCCTGCCCCTTTAACAGTCAGAGTGATAAAAGGTGGCAAGGTAGTGGCAACCCTGTTTaGTTAATCAGCCAATATGGA +
Preference number: 5 (lower is better)
Translates to: DLRGPCPFNSQSDKRWQGSGNPV*LISQYG
Trigger: TCCATATTGGCTGATTAACAAAACAGGGTTGCCACT...ACCTTGCCACCTTTTATCACTCTGACTGTTAAAGGGGCAGGGTCCTCTGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCCTGGGCGGTTTCCTaGCTGGATGACTTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPWAVS*LDDFQS
Trigger: GCTTTGAAAGTCATCCAGCAAGGAAACCGCCCAGGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCCAGACCAAATACAATaGGGAACGTCCATCAGTCTG +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLPDQIQ*GTSISL
Trigger: CAGACTGATGGACGTTCCCAATTGTATTTGGTCTGG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGGCAAGGTGGGTTCGTCCCAGGCATAATCCAATGAAGTCATGGGCTTCACTTAAGGAATTATTCTTGTaGACTTCAAAGCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: VARWVRPRHNPMKSWASLKELFL*TSKPPD
Trigger: GTCTGGAGGCTTTGAAGTCAACAAGAATAATTCCTT...AAGTGAAGCCCATGACTTCATTGGATTATGCCTGGGACGAACCCACCTTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCCAGAAAGTCCTCCTTaGGCCTGGACGACCAACCCA +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPPESPP*AWTTNP
Trigger: TGGGTTGGTCGTCCAGGCCAAAGGAGGACTTTCTGG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCAAAGTAGTATCGAATaGGTGTTCCACCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSQSSIE*VFHLAQ
Trigger: CTGAGCAAGGTGGAACACCAATTCGATACTACTTTG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp AACTTGACAGCAAGGACCTCAGATTTCACATGGACCATGGGCTTCTGGTGGGAGTGTTTGAGGATATCATaGATGATGAACTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: NLTARTSDFTWTMGFWWECLRIS*MMNSLV
Trigger: GACCAAGGAGTTCATCATCAATGATATCCTCAAACA...CTCCCACCAGAAGCCCATGGTCCATGTGAAATCTGAGGTCCTTGCTGTCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp TTTCTGATGCAAAATCCAGGGCGCCTGCCACTGGCTTGGTTACAGTGCCAACAATCCTCCTGGAAATGTTaGAGGATATCATTGATGATG +
Preference number: 5 (lower is better)
Translates to: FLMQNPGRLPLAWLQCQQSSWKC*RISLMM
Trigger: CATCATCAATGATATCCTCAAACATTTCCAGGAGGA...TTGTTGGCACTGTAACCAAGCCAGTGGCAGGCGCCCTGGATTTTGCATCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAATGTTCCAGCAAACTaGGCAGCAGAGTTTGATACT +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALNVPAN*AAEFDT
Trigger: AGTATCAAACTCTGCTGCCAAGTTTGCTGGAACATT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGATGTTGTCTGTGAGTTaGAAGAGCTGCTCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLMLSVS*KSCSCP
Trigger: AGGACAGGAGCAGCTCTTCAAACTCACAGACAACAT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTGTGCTCACGGCTTTCTaGGTCACCTGCACATACACC +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSVLTAF*VTCTYT
Trigger: GGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCAC...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGGGCTTTGTTCTTGGTaGTTGCTGCCCAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPGLCSW*LLPRQE
Trigger: CTCCTGCCTGGGCAGCAACAACCAAGAACAAAGCCC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CATGGAGGTTTTCATCATATTTTTCCACCTCTGGCAGGCAGGCTCCCAAGTGGCGACAGGATCTTGCTCTaGATCCCAAATACTCTTAAA +
Preference number: 5 (lower is better)
Translates to: HGGFHHIFPPLAGRLPSGDRILL*IPNTLK
Trigger: TTTAAGAGTATTTGGGATCAAGAGCAAGATCCTGTC...GCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGAAAACCTCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR CAA 90 bp GCACACACACACACACACACACACACACACAGACACAGACACAGAGGGGAAGTGAGATTTCAAGTGACTTaGTTCCAGAAGGTGATAGAA +
Preference number: 5 (lower is better)
Translates to: AHTHTHTHTHRHRHRGEVRFQVT*FQKVIE
Trigger: TTCTATCACCTTCTGGAACAAAGTCACTTGAAATCT...CACTTCCCCTCTGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAGACACTCTTGGGATTaGGGGAAGGGGCCGCTTGTC +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPRHSWD*GKGPLV
Trigger: GACAAGCGGCCCCTTCCCCAAATCCCAAGAGTGTCT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGAGCACTTTCATTCATTaGAGGAGTTCCTTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSTFIH*RSSLLL
Trigger: AAGGAGCAAGGAACTCCTCAAATGAATGAAAGTGCT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTTTAAGTCTGGTAAGTaGCCTGAGAGCACGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFFKSGK*PESTAP
Trigger: AGGAGCCGTGCTCTCAGGCAACTTACCAGACTTAAA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp GGAATCTCTTCACCTGTAAGGACTTCTCGCCATTCACTAACATTGTaGGTATCATCGAGAAATGTTCCGTTCCCTTCTGGAACTACCCCT +
Preference number: 5 (lower is better)
Translates to: GISSPVRTSRHSLTL*VSSRNVPFPSGTTP
Trigger: AGGGGTAGTTCCAGAAGGGAACGGAACATTTCTCGATGATACTCACAATGTTAGTGAATGGCGAGAAGTCCTTACAGGTGAAGAGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000643711.1
ENST00000646917.1
CDS TCA 90 bp CCTGCTCTGTATCTGGATTCTTTAATTTCTGCAGCTCTTGTTCGGTaGCAGGAAGTTCATCCACTTCATATGAACGGCTGCTTTTCCGGT +
Preference number: 5 (lower is better)
Translates to: PALYLDSLISAALVR*QEVHPLHMNGCFSG
Trigger: ACCGGAAAAGCAGCCGTTCATATGAAGTGGATGAACTTCCTGTCACCGAACAAGAGCTGCAGAAATTAAAGAATCCAGATACAGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS GCA 90 bp TGGGCAAAACATCCGGCTTCCTTCAGACCCAACAGCTTCTCTACCTaGCAACTGGGTGCAATTCAAAGAATACAGTTTAATGTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: WAKHPASFRPNSFST*QLGAIQRIQFNVLD
Trigger: ATCAAGGACATTAAACTGTATTCTTTGAATTGCACCCAGTTGGCAGGTAGAGAAGCTGTTGGGTCTGAAGGAAGCCGGATGTTTTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp GTCCACCTGTACATCCTGTATGCTGAGTTCAAGCATGTGACTGGTTaGCAGCTGTGTATAGTGCACATTGATTCCTGTAAGACTTGCAAA +
Preference number: 5 (lower is better)
Translates to: VHLYILYAEFKHVTG*QLCIVHIDSCKTCK
Trigger: TTTGCAAGTCTTACAGGAATCAATGTGCACTATACACAGCTGGCAACCAGTCACATGCTTGAACTCAGCATACAGGATGTACAGGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS CCA 90 bp ATCAAATTTACTCTTTCCAACAAGTATCTTGGGCTCATCCACTGTTaGAGAAGGAGGTGGGGTCAAGGGATAGTCCTTGTCTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: IKFTLSNKYLGLIHC*RRRWGQGIVLVLDF
Trigger: GAAGTCCAAGACAAGGACTATCCCTTGACCCCACCTCCTTCTCCAACAGTGGATGAGCCCAAGATACTTGTTGGAAAGAGTAAATTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp TCCTGGACATGCTTCCAATTGTCTTTCACTCGTCCAACCATGATCTaGAGGTCCATAAATGACAGCGAGTACCTCTCATACATCTTTGTG +
Preference number: 5 (lower is better)
Translates to: SWTCFQLSFTRPTMI*RSINDSEYLSYIFV
Trigger: CACAAAGATGTATGAGAGGTACTCGCTGTCATTTATGGACCTCCAGATCATGGTTGGACGAGTGAAAGACAATTGGAAGCATGTCCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp CTATTTGCCATGCCCACTGTCCGAAGAAGCAGTAAGTTCAGCCTATaGATTTCCACTGCAACCTCAGTGTTTTGTTCATATGTAGACTGG +
Preference number: 5 (lower is better)
Translates to: LFAMPTVRRSSKFSL*ISTATSVFCSYVDW
Trigger: CCAGTCTACATATGAACAAAACACTGAGGTTGCAGTGGAAATCCATAGGCTGAACTTACTGCTTCTTCGGACAGTGGGCATGGCAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGTACTGTGGTGACTTaGGTGGCTGCGCTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSTVVT*VAALFS
Trigger: GCTGAAAAGCGCAGCCACCAAAGTCACCACAGTACT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCGGGATAGTCCTTGTCTaGGACTTCCTTTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSGIVLV*DFLLLF
Trigger: AAAAAGCAAAAGGAAGTCCAAGACAAGGACTATCCC...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGTGGACTGAGGAGAGATaGCCATGGATAGATATGTCT +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLWTEER*PWIDMS
Trigger: AGACATATCTATCCATGGCAATCTCTCCTCAGTCCA...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAAGCCGCGGATCAGCTaGTATTTATACAGATCCAGA +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLKPRIS*YLYRSR
Trigger: TCTGGATCTGTATAAATACAAGCTGATCCGCGGCTT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTAAGCCGCGGATCAGCTaGTATTTATACAGATCCAGA +
Preference number: 5 (lower is better)
Translates to: VIEGSLTHTINPSESLIFKPRIS*YLYRSR
Trigger: TCTGGATCTGTATAAATACAAGCTGATCCGCGGCTT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTCCGTACCTGTTACATaGACCTTGACCTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSVPVT*TLTSRC
Trigger: GCACCTGGAGGTCAAGGTCAATGTAACAGGTACGGA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTTTCAGAATAATGGCATaGGTGTCGAAGCAGGACACA +
Preference number: 5 (lower is better)
Translates to: VIEGSLTHTINPSESLIFFRIMA*VSKQDT
Trigger: TGTGTCCTGCTTCGACACCAATGCCATTATTCTGAA...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGGTACGGGATCCACAATaGAAAGAGCTGTATCATGCT +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLVRDPQ*KELYHA
Trigger: AGCATGATACAGCTCTTTCAATTGTGGATCCCGTAC...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTGCTGCCTTTTTCAATaGGCCTTGACACGCCAAAAG +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFCCLFQ*ALTRQK
Trigger: CTTTTGGCGTGTCAAGGCCAATTGAAAAAGGCAGCA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCCTGCAGCATCTGTCTaGGCATTGTCCTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSPAASV*ALSCLK
Trigger: CTTCAGACAGGACAATGCCAAGACAGATGCTGCAGG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTCCCTGGGCGGTTTCCTaGCTGGATGACTTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPPWAVS*LDDFQS
Trigger: GCTTTGAAAGTCATCCAGCAAGGAAACCGCCCAGGG...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCCAGACCAAATACAATaGGGAACGTCCATCAGTCTG +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFPDQIQ*GTSISL
Trigger: CAGACTGATGGACGTTCCCAATTGTATTTGGTCTGG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAAGGAATTATTCTTGTaGACTTCAAAGCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAKELFL*TSKPPD
Trigger: GTCTGGAGGCTTTGAAGTCAACAAGAATAATTCCTT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTCGTAGGAAGAAGCATGGGACCTTAGAAAAGTaGTCAATTCGGAAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EILYVAPRRVISTRRKKHGTLEK*SIRKGG
Trigger: TCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCC...ATGCTTCTTCCTACGAGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGCAAAGTAGTATCGAATaGGTGTTCCACCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLQSSIE*VFHLAQ
Trigger: CTGAGCAAGGTGGAACACCAATTCGATACTACTTTG...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGTCCTCCTGGAAATGTTaGAGGATATCATTGATGATG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALSSWKC*RISLMM
Trigger: CATCATCAATGATATCCTCAAACATTTCCAGGAGGA...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTATGTTGTCTGTGAGTTaGAAGAGCTGCTCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFMLSVS*KSCSCP
Trigger: AGGACAGGAGCAGCTCTTCAAACTCACAGACAACAT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGCATAGTAGAGGCTCTTaGCGTAGTTTATTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALHSRGS*RSLFLV
Trigger: CACAAGAAATAAACTACGCAAAGAGCCTCTACTATG...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTATGTGGATTTCTGATTaGTTGCAACAGTTCAATGGG +
Preference number: 5 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFMWISD*LQQFNG
Trigger: CCCATTGAACTGTTGCAACAAATCAGAAATCCACAT...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAGCTACTATGGTATTTaGAGGCCCAGATCATACTTA +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGASYYGI*RPRSYL
Trigger: TAAGTATGATCTGGGCCTCAAAATACCATAGTAGCT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCCCAATGAAGCCAGCTTaGACTTCAAATGGTAATTCC +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSPMKPA*TSNGNS
Trigger: GGAATTACCATTTGAAGTCAAAGCTGGCTTCATTGG...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCCTCCTGGAGTTATCTaGGGTGTTCGTCAAAAGCAT +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFPPGVI*GVRQKH
Trigger: ATGCTTTTGACGAACACCCAAGATAACTCCAGGAGG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp CGTTTACTGCTACTAATTTCTGCAGTCTTCACTACATTGGTCCAATaGATGGGAGCCTTACAGAAAAATACACCCAATCCTTTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: RLLLLISAVFTTLVQ*MGALQKNTPNPLGR
Trigger: CCGGCCCAAAGGATTGGGTGTATTTTTCTGTAAGGCTCCCATTCATTGGACCAATGTAGTGAAGACTGCAGAAATTAGTAGCAGTAAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 90 bp CCCTCATTTGACTTTGAATCCTGCCTCTACCATTTTCTGGCCATGTaGTCATGGATAAGTTGGTTACCTTCCTTAACCCTCAGTTTCCGT +
Preference number: 5 (lower is better)
Translates to: PSFDFESCLYHFLAM*SWISWLPSLTLSFR
Trigger: ACGGAAACTGAGGGTTAAGGAAGGTAACCAACTTATCCATGATCACATGGCCAGAAAATGGTAGAGGCAGGATTCAAAGTCAAATGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473099.1
CDS TCA 90 bp GAGACTCAGAAGCAACAGCCTGGGAAAACAGAGAACAAGCACAGCTaGCATTTCTTTGTGTCTCTTTCTAGAAGTACAAGGCAGACAGAA +
Preference number: 5 (lower is better)
Translates to: ETQKQQPGKTENKHS*HFFVSLSRSTRQTE
Trigger: TTCTGTCTGCCTTGTACTTCTAGAAAGAGACACAAAGAAATGTCAGCTGTGCTTGTTCTCTGTTTTCCCAGGCTGTTGCTTCTGAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487188.1
CDS CCA 90 bp TGTGTAACAGAGTCACTGTACCTCGCTGCAACTGCAAATTCAGTTTaGCAAAGACATGATCTCGCTTTGTATACGTGTTCATACACGAGG +
Preference number: 5 (lower is better)
Translates to: CVTESLYLAATANSV*QRHDLALYTCSYTR
Trigger: CCTCGTGTATGAACACGTATACAAAGCGAGATCATGTCTTTGCCAAACTGAATTTGCAGTTGCAGCGAGGTACAGTGACTCTGTTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp TATGTGAAGCCATCAAAAGGTCAAAATCAGCACCATATGTCTGCATaGTATCCACCAGGAGCAAACCATGAACAGTTAGGGAGACTTCAG +
Preference number: 5 (lower is better)
Translates to: YVKPSKGQNQHHMSA*YPPGANHEQLGRLQ
Trigger: CTGAAGTCTCCCTAACTGTTCATGGTTTGCTCCTGGTGGATACCATGCAGACATATGGTGCTGATTTTGACCTTTTGATGGCTTCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATGGGTTCTCCCAGGTaGTTCTCTAATAAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPMGSPR*FSNKPR
Trigger: CCGCGGCTTATTAGAGAACAACCTGGGAGAACCCAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGACCAAGTTAATGGACTaGGTTTGGTTGGAAAAACTT +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALTKLMD*VWLEKL
Trigger: AAGTTTTTCCAACCAAACCAAGTCCATTAACTTGGT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACACCACTCTTCACAGTTTaGGGAACTATAGCAGATTCG +
Preference number: 5 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTPLFTV*GTIADS
Trigger: CGAATCTGCTATAGTTCCCAAAACTGTGAAGAGTGG...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCCGTACCTGTTACATaGACCTTGACCTCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSVPVT*TLTSRC
Trigger: GCACCTGGAGGTCAAGGTCAATGTAACAGGTACGGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCAGCACAGAAGTGATATaGATATCCAAACGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSTEVI*ISKRGL
Trigger: CAAACCTCGTTTGGATATCAATATCACTTCTGTGCT...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACCCTGCCAGCACAGAAGTGATATaGATATCCAAACGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: CRLSWKSFMLQLISEDPASTEVI*ISKRGL
Trigger: CAAACCTCGTTTGGATATCAATATCACTTCTGTGCT...GGCAGGGTCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACATCTCACCATATAGTTTaGGGTTCCAGGTGGAATGAG +
Preference number: 5 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTSHHIV*GSRWNE
Trigger: CTCATTCCACCTGGAACCCAAAACTATATGGTGAGA...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCGACCTCGGCCTTTCTaGACATCAATACCAATGTTA +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFRPRPF*TSIPML
Trigger: TAACATTGGTATTGATGTCAAGAAAGGCCGAGGTCG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGCTGGCTGAATATCAGTTTACAAAGAGACGGGGCATTTAAGGAGCCAGGGGCAAAGGTATCCCTCATGTaGATATGGAAGGAATTATTC +
Preference number: 5 (lower is better)
Translates to: CWLNISLQRDGAFKEPGAKVSLM*IWKELF
Trigger: GAATAATTCCTTCCATATCAACATGAGGGATACCTT...TGCCCCTGGCTCCTTAAATGCCCCGTCTCTTTGTAAACTGATATTCAGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCCTTACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCAAGGTATCCCTCATGTaGATATGGAAGGAATTATTC +
Preference number: 5 (lower is better)
Translates to: SLQKSETPKTRPRALIPGKVSLM*IWKELF
Trigger: GAATAATTCCTTCCATATCAACATGAGGGATACCTT...GCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTCATGAGGATTTACTTTCCCTCATTCCTTGACAACTTCCCCAAACCCGACTCCTCCTCCTGGAAATGTTaGAGGATATCATTGATGATG +
Preference number: 5 (lower is better)
Translates to: LMRIYFPSFLDNFPKPDSSSWKC*RISLMM
Trigger: CATCATCAATGATATCCTCAAACATTTCCAGGAGGA...GGAGTCGGGTTTGGGGAAGTTGTCAAGGAATGAGGGAAAGTAAATCCTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTATTTCTTGTGACAACTaGACAGCAAGGACCTCAGAT +
Preference number: 5 (lower is better)
Translates to: VIEGSLTHTINPSESLIFISCDN*TARTSD
Trigger: ATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAAT...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CCCTTCTGTTTTCACACCTTCCACTGTCGAAGTTATAACACTGGTCAGTCCACCCATAGTAGAGGCTCTTaGCGTAGTTTATTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: PFCFHTFHCRSYNTGQSTHSRGS*RSLFLV
Trigger: CACAAGAAATAAACTACGCAAAGAGCCTCTACTATG...GGTGGACTGACCAGTGTTATAACTTCGACAGTGGAAGGTGTGAAAACAGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS-3UTR CAA 90 bp CCTTCAGAACATTGCGATGAGCACCCACCAAGCAGCAAGACACTCTTGGGATTTCTCATTCACAGCATTTaGCATGGACACATTCTTAAT +
Preference number: 5 (lower is better)
Translates to: PSEHCDEHPPSSKTLLGFLIHSI*HGHILN
Trigger: ATTAAGAATGTGTCCATGCAAAATGCTGTGAATGAG...AAATCCCAAGAGTGTCTTGCTGCTTGGTGGGTGCTCATCGCAATGTTCTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTCAAATGTCAAAGTGCTaGGTTGTGCAATCACAGGAG +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFQMSKC*VVQSQE
Trigger: CTCCTGTGATTGCACAACCAAGCACTTTGACATTTG...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTGATAGAAGGCTCACTGACGCATACAATCAACCCTTCCGAGAGTCTCATCTTTCCAATGAAGCCAGCTTaGACTTCAAATGGTAATTCC +
Preference number: 5 (lower is better)
Translates to: VIEGSLTHTINPSESLIFPMKPA*TSNGNS
Trigger: GGAATTACCATTTGAAGTCAAAGCTGGCTTCATTGG...AAAGATGAGACTCTCGGAAGGGTTGATTGTATGCGTCAGTGAGCCTTCTATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TACAGAAAAGCGAAACACCAAAAACAAGACCCAGGGCGCTCATACCAGGCCTTGACCTCTCATACATCTTaGTGCTCATTAAATGTGCTT +
Preference number: 5 (lower is better)
Translates to: YRKAKHQKQDPGRSYQALTSHTS*CSLNVL
Trigger: AAGCACATTTAATGAGCACAAAGATGTATGAGAGGT...CAAGGCCTGGTATGAGCGCCCTGGGTCTTGTTTTTGGTGTTTCGCTTTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTATTCATTACGGAGTCTaGCAAACTTCCCCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSIHYGV*QTSPLL
Trigger: GAGCAGCGGGGAAGTTTGCAAGACTCCGTAATGAAT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp TTCTTCTCCAATAAGTCCTCCATCAGCAGAGAATGCAGGGCAATCTaGATAGATAAAGTCTGGGGATGGTCTTTACTGAATTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: FFSNKSSISRECRAI*IDKVWGWSLLNSTS
Trigger: TGAGGTGGAATTCAGTAAAGACCATCCCCAGACTTTATCTATTCAGATTGCCCTGCATTCTCTGCTGATGGAGGACTTATTGGAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp AGTACAAGGCAGACAGAAAGTCCACTTATTCACCCTGAGGAGAGATaGACCAGTACAATTACTTCACACACTAAGAACACCCAATCTTCC +
Preference number: 5 (lower is better)
Translates to: STRQTESPLIHPEER*TSTITSHTKNTQSS
Trigger: GGAAGATTGGGTGTTCTTAGTGTGTGAAGTAATTGTACTGGTTCATCTCTCCTCAGGGTGAATAAGTGGACTTTCTGTCTGCCTTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487188.1
CDS TCA 90 bp TTTACATCTGAAAACTCGAGCTGCATGAAAGCACTTTCATTCATTTaGGGAGTTCCTTGCTCCTTGTGTAACAGAGTCACTGTACCTCGC +
Preference number: 5 (lower is better)
Translates to: FTSENSSCMKALSFI*GVPCSLCNRVTVPR
Trigger: GCGAGGTACAGTGACTCTGTTACACAAGGAGCAAGGAACTCCTCAAATGAATGAAAGTGCTTTCATGCAGCTCGAGTTTTCAGATGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp CATACATCTTTGTGCTCATTAAATGTGCTTGAAGCTGTTCTTCACTaGACTCAACTCCAGAAAAGGGAGGTGTTTTCTCTCCGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: HTSLCSLNVLEAVLH*TQLQKREVFSLRCC
Trigger: GCAGCAACGGAGAGAAAACACCTCCCTTTTCTGGAGTTGAGTTCAGTGAAGAACAGCTTCAAGCACATTTAATGAGCACAAAGATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp GACAGCGAGTACCTCTCATACATCTTTGTGCTCATTAAATGTGCTTaGAGCTGTTCTTCACTGAACTCAACTCCAGAAAAGGGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: DSEYLSYIFVLIKCA*SCSSLNSTPEKGGV
Trigger: AACACCTCCCTTTTCTGGAGTTGAGTTCAGTGAAGAACAGCTTCAAGCACATTTAATGAGCACAAAGATGTATGAGAGGTACTCGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp GATCTGAAGTATAAATCAATCGACGCTCTAACTGTAGGTGAACGTTaGACTTCTCTACCACATGTGTTGGTCCCACGTCAATATCCTGGA +
Preference number: 5 (lower is better)
Translates to: DLKYKSIDALTVGER*TSLPHVLVPRQYPG
Trigger: TCCAGGATATTGACGTGGGACCAACACATGTGGTAGAGAAGTTCAACGTTCACCTACAGTTAGAGCGTCGATTGATTTATACTTCAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp ATCCCGAAGGCTTCCCGTTGGAATATCAAAGCTCAAGTTCTTATGTaGAGCCATCAAAAGGTCAAAATCAGCACCATATGTCTGCATGGT +
Preference number: 5 (lower is better)
Translates to: IPKASRWNIKAQVLM*SHQKVKISTICLHG
Trigger: ACCATGCAGACATATGGTGCTGATTTTGACCTTTTGATGGCTTCACATAAGAACTTGAGCTTTGATATTCCAACGGGAAGCCTTCGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp TGGGTGCAATTCAAAGAATACAGTTTAATGTCCTTGATTTCCACCTaGAGACGGTCACTTCTGGATTCATCATCTCCCGCCACAAAATTC +
Preference number: 5 (lower is better)
Translates to: WVQFKEYSLMSLIST*RRSLLDSSSPATKF
Trigger: GAATTTTGTGGCGGGAGATGATGAATCCAGAAGTGACCGTCTGCAGGTGGAAATCAAGGACATTAAACTGTATTCTTTGAATTGCACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp GCACCAGTTCATATGCATTATTACCAGGATTTAGGAATTACGTGTTaGAGATCTTTTCTCCCCCGCAAAGGTGGAATTACAGCCCACATT +
Preference number: 5 (lower is better)
Translates to: APVHMHYYQDLGITC*RSFLPRKGGITAHI
Trigger: AATGTGGGCTGTAATTCCACCTTTGCGGGGGAGAAAAGATCTGCAACACGTAATTCCTAAATCCTGGTAATAATGCATATGAACTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487188.1
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAACACACGGAGATTGTaGAGAACTACTGTAAAGCAG +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFNTRRL*RTTVKQ
Trigger: CTGCTTTACAGTAGTTCTCAACAATCTCCGTGTGTT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp ATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGATGCTGCCTTTTTCAATaGGCCTTGACACGCCAAAAG +
Preference number: 5 (lower is better)
Translates to: IKLPIILEIIHVAVDLRGCCLFQ*ALTRQK
Trigger: CTTTTGGCGTGTCAAGGCCAATTGAAAAAGGCAGCA...TCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTATATCCAAACGAGGTTaGGCCTTGGCTTCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSISKRG*ALASSF
Trigger: GAAGCTAGAAGCCAAGGCCAAACCTCGTTTGGATAT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp ATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGAATATCCAAACGAGGTTaGGCCTTGGCTTCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: IKLPIILEIIHVAVDLRGISKRG*ALASSF
Trigger: GAAGCTAGAAGCCAAGGCCAAACCTCGTTTGGATAT...TCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp ATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGAGCCATTTACTCTCACTaGCAGTTGATGAATCCGGAG +
Preference number: 5 (lower is better)
Translates to: IKLPIILEIIHVAVDLRGAIYSH*QLMNPE
Trigger: CTCCGGATTCATCAACTGCAAGTGAGAGTAAATGGC...TCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCATCGTGCAGAGGTTaGGCTGCTCTTTGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSSCRG*AALCQH
Trigger: ATGCTGACAAAGAGCAGCCAAACCTCTGCACGATGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGAAGGAATTATTCTTGTaGACTTCAAAGCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLKELFL*TSKPPD
Trigger: GTCTGGAGGCTTTGAAGTCAACAAGAATAATTCCTT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACTGGAAATCATTCATGTaGCAGTTGATCTCAGAGGAC +
Preference number: 5 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNWKSFM*QLISED
Trigger: GTCCTCTGAGATCAACTGCAACATGAATGATTTCCA...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp AGTGGCTGTCTGAATACAAATAAACACTGGCGTTCCAACCCAAAGTGGAAAACACAAAGTAGTATCGAATaGGTGTTCCACCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: SGCLNTNKHWRSNPKWKTQSSIE*VFHLAQ
Trigger: CTGAGCAAGGTGGAACACCAATTCGATACTACTTTG...TGTTTTCCACTTTGGGTTGGAACGCCAGTGTTTATTTGTATTCAGACAGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466732.2
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGATCCAATGGGAGCTaGTTGGAGGTGAACACACTT +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSRSNGS*LEVNTL
Trigger: AAGTGTGTTCACCTCCAACAAGCTCCCATTGGATCT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTATGTTGTCTGTGAGTTaGAAGAGCTGCTCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSMLSVS*KSCSCP
Trigger: AGGACAGGAGCAGCTCTTCAAACTCACAGACAACAT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGTGCTCACGGCTTTCTaGGTCACCTGCACATACACC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYVLTAF*VTCTYT
Trigger: GGTGTATGTGCAGGTGACCAAGAAAGCCGTGAGCAC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTATTTCTTGTGACAACTaGACAGCAAGGACCTCAGAT +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFISCDN*TARTSD
Trigger: ATCTGAGGTCCTTGCTGTCAAGTTGTCACAAGAAAT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCTTTGTTCTTGGTTGTaGCTGCCCAGGCAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYLCSWL*LPRQES
Trigger: GCTCTCCTGCCTGGGCAGCAACAACCAAGAACAAAG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGGGACTGGGTAGCTTaGGATATCTCCTTACCCAAT +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSRDWVA*DISLPN
Trigger: ATTGGGTAAGGAGATATCCAAAGCTACCCAGTCCCT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTAGACATGATCTCGCTTaGTATACGTGTTCATACACG +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFRHDLA*YTCSYT
Trigger: CGTGTATGAACACGTATACAAAGCGAGATCATGTCT...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp ATTTTGCAATGGCAAGAAACAGCTGAACATCATTATAGGAGAGTCTaGTATCCAGGGCTTGTAACTGAATCTCCAGGACAGGTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: ILQWQETAEHHYRRV*YPGLVTESPGQVGN
Trigger: ATTTCCCACCTGTCCTGGAGATTCAGTTACAAGCCCTGGATATCAGACTCTCCTATAATGATGTTCAGCTGTTTCTTGCCATTGCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 90 bp TTACTCTCCTCAATGAAATCACCCACTAGCAAACGATCAAGAGTTTaGCGGATTTCTGCCTTGGTCTGCATCTTCAGCTTGTTATATTGT +
Preference number: 5 (lower is better)
Translates to: LLSSMKSPTSKRSRV*RISALVCIFSLLYC
Trigger: ACAATATAACAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGCAAACTCTTGATCGTTTGCTAGTGGGTGATTTCATTGAGGAGAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp TACTTGCAGTTGCAATTTTTCTGCCATATTTCTCTCTATTTGCCATaGCCACTGTCCGAAGAAGCAGTAAGTTCAGCCTATGGATTTCCA +
Preference number: 5 (lower is better)
Translates to: YLQLQFFCHISLYLP*PLSEEAVSSAYGFP
Trigger: TGGAAATCCATAGGCTGAACTTACTGCTTCTTCGGACAGTGGGCATGGCAAATAGAGAGAAATATGGCAGAAAAATTGCAACTGCAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 90 bp TTTTTAAGTCTGGTAAGTTGCCTGAGAGCACGGCTCCTGGATATTTaGGATCTGAAGTATAAATCAATCGACGCTCTAACTGTAGGTGAA +
Preference number: 5 (lower is better)
Translates to: FLSLVSCLRARLLDI*DLKYKSIDALTVGE
Trigger: TTCACCTACAGTTAGAGCGTCGATTGATTTATACTTCAGATCCCAAATATCCAGGAGCCGTGCTCTCAGGCAACTTACCAGACTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTGGTGCCACCTATACTaGCAGTTGCAATTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSWCHLY*QLQFFC
Trigger: GCAGAAAAATTGCAACTGCAAGTATAGGTGGCACCA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp ATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAGGACTAATTTGGACACATTaGCTTTGGCAAGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: IKLPIILEIIHVAVDLRGLIWTH*LWQAHW
Trigger: CCAGTGAGCTTGCCAAAGCAAATGTGTCCAAATTAG...TCCTCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TGGTTGTTGCTGCCCAGGCAGGAGAGCACTTTTATGTGGATTTCTGATTTGTTGACCAAGTTAATGGACTaGGTTTGGTTGGAAAAACTT +
Preference number: 5 (lower is better)
Translates to: WLLLPRQESTFMWISDLLTKLMD*VWLEKL
Trigger: AAGTTTTTCCAACCAAACCAAGTCCATTAACTTGGT...CAACAAATCAGAAATCCACATAAAAGTGCTCTCCTGCCTGGGCAGCAACAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TCTGTGTCACTAAATGAGATCCTATACGTAGCTCCTCGGAGAGTAATTTCCACTAACACACGGAGATTGTaGAGAACTACTGTAAAGCAG +
Preference number: 5 (lower is better)
Translates to: SVSLNEILYVAPRRVISTNTRRL*RTTVKQ
Trigger: CTGCTTTACAGTAGTTCTCAACAATCTCCGTGTGTT...AGTGGAAATTACTCTCCGAGGAGCTACGTATAGGATCTCATTTAGTGACACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGGAAGGGAAGACCGCTaGGTAACTACTCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYGREDR*VTTPLF
Trigger: GAAGAGTGGAGTAGTTACCAAGCGGTCTTCCCTTCC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCCAGGTGCCTTTCATaGGACACAGGAAGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSRCLS*DTGRED
Trigger: GTCTTCCCTTCCTGTGTCCAATGAAAGGCACCTGGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCACACACTCTCAGCTTaGATCTCCACGCCAGAGATC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYHTLSA*ISTPEI
Trigger: GATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGTG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATATCCAAACGAGGTTaGGCCTTGGCTTCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPISKRG*ALASSF
Trigger: GAAGCTAGAAGCCAAGGCCAAACCTCGTTTGGATAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAGACACTGGGCTCACTaGCTCCCAGCCATTTACTCT +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYRHWAH*LPAIYS
Trigger: AGAGTAAATGGCTGGGAGCAAGTGAGCCCAGTGTCT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTCTCACCATATAGTTTaGGGTTCCAGGTGGAATGAG +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSHHIV*GSRWNE
Trigger: CTCATTCCACCTGGAACCCAAAACTATATGGTGAGA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTGACTTCAAAGCCTCCAGACCAAATACAATTGGGAACGTCCATCAGTCTGACATGGAAGGAATTATTCTaGTTGACTTCAAAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LTSKPPDQIQLGTSISLTWKELF*LTSKPP
Trigger: TGGAGGCTTTGAAGTCAACAAGAATAATTCCTTCCA...TGTCAGACTGATGGACGTTCCCAATTGTATTTGGTCTGGAGGCTTTGAAGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTATGACTCTTTGTGTCTaGGGTGAGACATCCAAAACG +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSMTLCV*GETSKT
Trigger: CGTTTTGGATGTCTCACCCAAGACACAAAGAGTCAT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTTGATTAATAAATTGTaGTTCAGGTGGAACTGGCCC +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFLINKL*FRWNWP
Trigger: GGGCCAGTTCCACCTGAACAACAATTTATTAATCAA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTACTTACAATGCTGACTaGCACCCATGTGGTAATGGA +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSTYNAD*HPCGNG
Trigger: TCCATTACCACATGGGTGCAAGTCAGCATTGTAAGT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGAGAAAACTTACAATGCTGACTTGCACCCATGTGGTAATGGAGCACAGGTTTTGGATTTCTGATTTGTaGCAACAGTTCAATGGGACT +
Preference number: 5 (lower is better)
Translates to: LRKLTMLTCTHVVMEHRFWISDL*QQFNGT
Trigger: AGTCCCATTGAACTGTTGCAACAAATCAGAAATCCA...AAACCTGTGCTCCATTACCACATGGGTGCAAGTCAGCATTGTAAGTTTTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGACCGCAGGGGCTTCTaGGAGCAGTTTCTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYDRRGF*EQFLFK
Trigger: TTTGAAGAGAAACTGCTCCAAGAAGCCCCTGCGGTC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTCAAATGTCAAAGTGCTaGGTTGTGCAATCACAGGAG +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSQMSKC*VVQSQE
Trigger: CTCCTGTGATTGCACAACCAAGCACTTTGACATTTG...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAATTCAACAGCACCTTaGAGAAGTGCAACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSNSTAP*RSATES
Trigger: GCTCTCAGTTGCACTTCTCAAAGGTGCTGTTGAATT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGCTCATATACATGCTTaGCTAACACCACCTGAACTG +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPAHIHA*LTPPEL
Trigger: CAGTTCAGGTGGTGTTAGCAAAGCATGTATATGAGC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTCACTGTACACGAGATaGTCCAGGGTTTGTAAAACC +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPSLYTR*SRVCKT
Trigger: GGTTTTACAAACCCTGGACAATCTCGTGTACAGTGA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCAGGATATTCCACATaGGACACTGAGGGGCAAGAC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSGYST*DTEGQD
Trigger: GTCTTGCCCCTCAGTGTCCAATGTGGAATATCCTGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTTGGACACATTTGCTTaGGCAAGCTCACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYLDTFA*ASSLVV
Trigger: GACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCAA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTGGACTGAGGAGAGATaGCCATGGATAGATATGTCT +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPWTEER*PWIDMS
Trigger: AGACATATCTATCCATGGCAATCTCTCCTCAGTCCA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAATCTGAATGGACCCTaGGGTGGTGCTGCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYNLNGP*GGAAVL
Trigger: AAGAACAGCAGCACCACCCAAGGGTCCATTCAGATT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTTCAGAATAATGGCATaGGTGTCGAAGCAGGACACA +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPFRIMA*VSKQDT
Trigger: TGTGTCCTGCTTCGACACCAATGCCATTATTCTGAA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp GTAAAGACAACCGGGACCTTAGAAAAGTTGTCAATTCGGAAAGGAGGAGGTAACAAGGTATCCCTCATGTaGATATGGAAGGAATTATTC +
Preference number: 5 (lower is better)
Translates to: VKTTGTLEKLSIRKGGGNKVSLM*IWKELF
Trigger: GAATAATTCCTTCCATATCAACATGAGGGATACCTT...GTTACCTCCTCCTTTCCGAATTGACAACTTTTCTAAGGTCCCGGTTGTCTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTTGGAAATCATTCATGTaGCAGTTGATCTCAGAGGAC +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSWKSFM*QLISED
Trigger: GTCCTCTGAGATCAACTGCAACATGAATGATTTCCA...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATGACTCTTTGTGTCTaGGGTGAGACATCCAAAACG +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPMTLCV*GETSKT
Trigger: CGTTTTGGATGTCTCACCCAAGACACAAAGAGTCAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTACTTACAATGCTGACTaGCACCCATGTGGTAATGGA +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPTYNAD*HPCGNG
Trigger: TCCATTACCACATGGGTGCAAGTCAGCATTGTAAGT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp GGGCTTGTAACTGAATCTCCAGGACAGGTGGGAAATCTTCACTATTaGATGCATCCATCAATCCTGAACTATTTTGATAAGAAGAATTCC +
Preference number: 5 (lower is better)
Translates to: GLVTESPGQVGNLHY*MHPSILNYFDKKNS
Trigger: GGAATTCTTCTTATCAAAATAGTTCAGGATTGATGGATGCATTCAATAGTGAAGATTTCCCACCTGTCCTGGAGATTCAGTTACAAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 90 bp TTTAGATCTCTCAACAAACGTGAAACTCAAAGCTTCAGTGAGGGCTaGATCTTCCATTCTGACAAACACAGATTCAAAGTAGCCAATATC +
Preference number: 5 (lower is better)
Translates to: FRSLNKRETQSFSEG*IFHSDKHRFKVANI
Trigger: GATATTGGCTACTTTGAATCTGTGTTTGTCAGAATGGAAGATGCAGCCCTCACTGAAGCTTTGAGTTTCACGTTTGTTGAGAGATCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTGAAGCCATCTTCAGGTaGAGAAAACACTCCTGTTTA +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPEAIFR*RKHSCL
Trigger: TAAACAGGAGTGTTTTCTCAACCTGAAGATGGCTTC...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGTTCCCGAGTCTTCCTaGGAGTTTCAAAGAGCGATA +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYVPESS*EFQRAI
Trigger: TATCGCTCTTTGAAACTCCAAGGAAGACTCGGGAAC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACATATCCAAACGAGGTTaGGCCTTGGCTTCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYISKRG*ALASSF
Trigger: GAAGCTAGAAGCCAAGGCCAAACCTCGTTTGGATAT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGCACAGAAGTGATATaGATATCCAAACGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSSTEVI*ISKRGL
Trigger: CAAACCTCGTTTGGATATCAATATCACTTCTGTGCT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTACTCTCACTTGCAGTaGATGAATCCGGAGGTCATG +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYYSHLQ*MNPEVM
Trigger: CATGACCTCCGGATTCATCAACTGCAAGTGAGAGTA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAGACATGATCTCGCTTaGTATACGTGTTCATACACG +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPRHDLA*YTCSYT
Trigger: CGTGTATGAACACGTATACAAAGCGAGATCATGTCT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCTCTACCACATGTGTaGGTCCCACGTCAATATCCT +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSLPHV*VPRQYP
Trigger: AGGATATTGACGTGGGACCAACACATGTGGTAGAGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTTGGTACCAAACACCTaGAGCACAGAAATGTACCGG +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYLVPNT*STEMYR
Trigger: CCGGTACATTTCTGTGCTCAAGGTGTTTGGTACCAA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp CAGGACAGGTGGGAAATCTTCACTATTGAATGCATCCATCAATCCTaGACTATTTTGATAAGAAGAATTCCCCACCAACTCCATTTGAAT +
Preference number: 5 (lower is better)
Translates to: QDRWEIFTIECIHQS*TILIRRIPHQLHLN
Trigger: ATTCAAATGGAGTTGGTGGGGAATTCTTCTTATCAAAATAGTTCAGGATTGATGGATGCATTCAATAGTGAAGATTTCCCACCTGTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 90 bp GGATTGAGGATAATATCTAAATTATTCACCTGTAGGGAAATCACCTaGAGAGTACTGTCTAAATTCATCGATGGGCACTCTGAACTCACA +
Preference number: 5 (lower is better)
Translates to: GLRIISKLFTCREIT*RVLSKFIDGHSELT
Trigger: TGTGAGTTCAGAGTGCCCATCGATGAATTTAGACAGTACTCTTCAGGTGATTTCCCTACAGGTGAATAATTTAGATATTATCCTCAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 90 bp TCAGAGAAAATTACCTGTTTCCCTATTTCAGCAAATTTGATTTGTTaGAAATACACAAGAGACACCCATGCCTATCACAGAAGGCAATGG +
Preference number: 5 (lower is better)
Translates to: SEKITCFPISANLIC*KYTRDTHAYHRRQW
Trigger: CCATTGCCTTCTGTGATAGGCATGGGTGTCTCTTGTGTATTTGCAACAAATCAAATTTGCTGAAATAGGGAAACAGGTAATTTTCTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476169.1
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTGGTGCCACCTATACTaGCAGTTGCAATTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYWCHLY*QLQFFC
Trigger: GCAGAAAAATTGCAACTGCAAGTATAGGTGGCACCA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTATTGAGACATTAACTTaGGTGCCACCTATACTTGCA +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPIETLT*VPPILA
Trigger: TGCAAGTATAGGTGGCACCAAAGTTAATGTCTCAAT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTCACTGTACACGAGATaGTCCAGGGTTTGTAAAACC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSLYTR*SRVCKT
Trigger: GGTTTTACAAACCCTGGACAATCTCGTGTACAGTGA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp ATAATAAAGCTGCCGATTATCCTGGAAATCATTCATGTTGCAGTTGATCTCAGAAAGCAGGAGGAATCCTaGGTAGATCTGAAATGTAGT +
Preference number: 5 (lower is better)
Translates to: IIKLPIILEIIHVAVDLRKQEES*VDLKCS
Trigger: ACTACATTTCAGATCTACCAAGGATTCCTCCTGCTT...TCTGAGATCAACTGCAACATGAATGATTTCCAGGATAATCGGCAGCTTTATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646917.1
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTTGATTAATAAATTGTaGTTCAGGTGGAACTGGCCC +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPLINKL*FRWNWP
Trigger: GGGCCAGTTCCACCTGAACAACAATTTATTAATCAA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAATTGGTGTTCCACCTaGCTCAGCTGTCTTTTCATG +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYNWCST*LSCLFM
Trigger: CATGAAAAGACAGCTGAGCAAGGTGGAACACCAATT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTTGTTTGAGGATATCATaGATGATGAACTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPCLRIS*MMNSLV
Trigger: GACCAAGGAGTTCATCATCAATGATATCCTCAAACA...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACCATGATTTGCCGGTATaGCAGCTGAGAGAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYHDLPV*QLREFQ
Trigger: TTGAAACTCTCTCAGCTGCAATACCGGCAAATCATG...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTTGCTCCCAGCAGGAATTTAAAACCAAGGATAAGAGATGCCTTTGTCAAATCTAGATTTCAAGTGACTTaGTTCCAGAAGGTGATAGAA +
Preference number: 5 (lower is better)
Translates to: LAPSRNLKPRIRDAFVKSRFQVT*FQKVIE
Trigger: TTCTATCACCTTCTGGAACAAAGTCACTTGAAATCT...AGATTTGACAAAGGCATCTCTTATCCTTGGTTTTAAATTCCTGCTGGGAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTTAATGGCCTGCGGATaGTATATGATGTTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYLMACG*YMMFKG
Trigger: GCCCTTGAACATCATATACAATCCGCAGGCCATTAA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp ACCAAAGGTCAGAGAAAATTACCTGTTTCCCTATTTCAGCAAATTTaGTTTGTTGCAAATACACAAGAGACACCCATGCCTATCACAGAA +
Preference number: 5 (lower is better)
Translates to: TKGQRKLPVSLFQQI*FVANTQETPMPITE
Trigger: TTCTGTGATAGGCATGGGTGTCTCTTGTGTATTTGCAACAAATCAAATTTGCTGAAATAGGGAAACAGGTAATTTTCTCTGACCTTTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476169.1
CDS CCA 90 bp AAATTTTCCTTCAATCTTCATGATGCTAGAAGTTCCCAGGTCATCTaGGCTAAGAGAAAAAGTCAATTCAGATTCTCTCTCTATAGGGAT +
Preference number: 5 (lower is better)
Translates to: KFSFNLHDARSSQVI*AKRKSQFRFSLYRD
Trigger: ATCCCTATAGAGAGAGAATCTGAATTGACTTTTTCTCTTAGCCCAGATGACCTGGGAACTTCTAGCATCATGAAGATTGAAGGAAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAGTGGCAACCCTGTTTaGTTAATCAGCCAATATGGA +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYSGNPV*LISQYG
Trigger: TCCATATTGGCTGATTAACAAAACAGGGTTGCCACT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTAAGGTATCCCTCATGTaGATATGGAAGGAATTATTC +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPKVSLM*IWKELF
Trigger: GAATAATTCCTTCCATATCAACATGAGGGATACCTT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTGGAAATCATTCATGTaGCAGTTGATCTCAGAGGAC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYWKSFM*QLISED
Trigger: GTCCTCTGAGATCAACTGCAACATGAATGATTTCCA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAATGTTCCAGCAAACTaGGCAGCAGAGTTTGATACT +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYNVPAN*AAEFDT
Trigger: AGTATCAAACTCTGCTGCCAAGTTTGCTGGAACATT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACGGTTTCCCCCTAAGTTaGGTAAGACTAGTTAGGAAA +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYGFPLS*VRLVRK
Trigger: TTTCCTAACTAGTCTTACCAAACTTAGGGGGAAACC...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp TTTACAGTTAACAAACCTTTACACATAGCACAGACCCTGTTCAGAAACGTTCCTACCTCTCATACATCTTaGTGCTCATTAAATGTGCTT +
Preference number: 5 (lower is better)
Translates to: FTVNKPLHIAQTLFRNVPTSHTS*CSLNVL
Trigger: AAGCACATTTAATGAGCACAAAGATGTATGAGAGGT...AGGAACGTTTCTGAACAGGGTCTGTGCTATGTGTAAAGGTTTGTTAACTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACAGACTGGTAAGTTCCTaGTTCTCTGAAGCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYRLVSS*FSEASF
Trigger: GAAAGAAGCTTCAGAGAACAAGGAACTTACCAGTCT...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 90 bp CATACTTTACATTTAGTGAACAGAATTAACCTACAGTACTGCCTGTaGATACACCATGAAATAGCGGTTAAAGACCCTCATTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: HTLHLVNRINLQYCL*IHHEIAVKDPHLTL
Trigger: CAAAGTCAAATGAGGGTCTTTAACCGCTATTTCATGGTGTATTCACAGGCAGTACTGTAGGTTAATTCTGTTCACTAAATGTAAAGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473099.1
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTGTTTGAGGATATCATaGATGATGAACTCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYCLRIS*MMNSLV
Trigger: GACCAAGGAGTTCATCATCAATGATATCCTCAAACA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS-3UTR CAA 90 bp CTGCCTCACAAATTAATACGATTTCCATTTGTACTTTTCCTCATGAGGATTTACTGGATTTCTGATTTGTaGCAACAGTTCAATGGGACT +
Preference number: 5 (lower is better)
Translates to: LPHKLIRFPFVLFLMRIYWISDL*QQFNGT
Trigger: AGTCCCATTGAACTGTTGCAACAAATCAGAAATCCA...GTAAATCCTCATGAGGAAAAGTACAAATGGAAATCGTATTAATTTGTGAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp AAAACAGTGCCCGCCAAGCCTGCTCCTGGCGGATGGTaGGCTGCCCACCAGCGGCGGCTCTCGTTCCTGCGG +
Preference number: 6 (lower is better)
Translates to: KTVPAKPAPGGW*AAHQRRLSFLR
Trigger: CCGCAGGAACGAGAGCCGCCGCTGGTGGGCAGCTCACCATCCGCCAGGAGCAGGCTTGGCGGGCACTGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647414.1
CDS GCA 72 bp AGTGCCCGCCAAGCCTGCTCCTGGCGGATGGTGAGCTaGCCACCAGCGGCGGCTCTCGTTCCTGCGGTTATT +
Preference number: 6 (lower is better)
Translates to: SARQACSWRMVS*PPAAALVPAVI
Trigger: AATAACCGCAGGAACGAGAGCCGCCGCTGGTGGGCAGCTCACCATCCGCCAGGAGCAGGCTTGGCGGGCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647414.1
CDS CCA 72 bp GCCTCCACCGGGTTCTGGGGCTCCCGGACAGGCTCCTaGAGAATCAAACTGAGGCTCCCGCAGACTCTCTGC +
Preference number: 6 (lower is better)
Translates to: ASTGFWGSRTGS*RIKLRLPQTLC
Trigger: GCAGAGAGTCTGCGGGAGCCTCAGTTTGATTCTCCAGGAGCCTGTCCGGGAGCCCCAGAACCCGGTGGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp CAGACCCCTCGGTGGAGCGGGCGGCTGAGGGCTTATTaGGATTGTGAGGAACTGAGGAGCCCTCATGGGCCA +
Preference number: 6 (lower is better)
Translates to: QTPRWSGRLRAY*DCEELRSPHGP
Trigger: TGGCCCATGAGGGCTCCTCAGTTCCTCACAATCCCAATAAGCCCTCAGCCGCCCGCTCCACCGAGGGGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS GCA 72 bp CTCAGCTTTGATCTCCACGCCAGAGATCAATGGCGCTaGCACAGCCCCTGGGCTATCTCGGCTGGTGGAGGC +
Preference number: 6 (lower is better)
Translates to: LSFDLHARDQWR*HSPWAISAGGG
Trigger: GCCTCCACCAGCCGAGATAGCCCAGGGGCTGTGGCAGCGCCATTGATCTCTGGCGTGGAGATCAAAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 72 bp TCGGTGGAGCGGGCGGCTGAGGGCTTATTGGGATTGTaGGGAACTGAGGAGCCCTCATGGGCCAGCATTCCT +
Preference number: 6 (lower is better)
Translates to: SVERAAEGLLGL*GTEEPSWASIP
Trigger: AGGAATGCTGGCCCATGAGGGCTCCTCAGTTCCTCACAATCCCAATAAGCCCTCAGCCGCCCGCTCCACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS GCA 72 bp CTTCCTAGGCTCATTCCAGCAAGAGGCATCGTGAACTaGCCCTGGGAATGGGTTCCCCTGGGCTCCTCCGTG +
Preference number: 6 (lower is better)
Translates to: LPRLIPARGIVN*PWEWVPLGSSV
Trigger: CACGGAGGAGCCCAGGGGAACCCATTCCCAGGGGCAGTTCACGATGCCTCTTGCTGGAATGAGCCTAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp GCTGACAGTCCCTCAACCACATTCCCTTCTGGGGTCTaGTGCCCGTACCAGCCACCCCATCCAGGAAACCAG +
Preference number: 6 (lower is better)
Translates to: ADSPSTTFPSGV*CPYQPPHPGNQ
Trigger: CTGGTTTCCTGGATGGGGTGGCTGGTACGGGCAGCAGACCCCAGAAGGGAATGTGGTTGAGGGACTGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp AGGCTCATTCCAGCAAGAGGCATCGTGAACTGCCCCTaGGAATGGGTTCCCCTGGGCTCCTCCGTGCTTGTC +
Preference number: 6 (lower is better)
Translates to: RLIPARGIVNCP*EWVPLGSSVLV
Trigger: GACAAGCACGGAGGAGCCCAGGGGAACCCATTCCCAGGGGCAGTTCACGATGCCTCTTGCTGGAATGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp ATGGCGCTGCCACAGCCCCTGGGCTATCTCGGCTGGTaGAGGCCAAGGAAAGAGACTTCAGAGGTTCCGCAT +
Preference number: 6 (lower is better)
Translates to: MALPQPLGYLGW*RPRKETSEVPH
Trigger: ATGCGGAACCTCTGAAGTCTCTTTCCTTGGCCTCCACCAGCCGAGATAGCCCAGGGGCTGTGGCAGCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp TCAATGGCGCTGCCACAGCCCCTGGGCTATCTCGGCTaGTGGAGGCCAAGGAAAGAGACTTCAGAGGTTCCG +
Preference number: 6 (lower is better)
Translates to: SMALPQPLGYLG*WRPRKETSEVP
Trigger: CGGAACCTCTGAAGTCTCTTTCCTTGGCCTCCACCAGCCGAGATAGCCCAGGGGCTGTGGCAGCGCCATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp TGTCAGTCACTGCAGCGAGACCAGCAATATCTAAGATaGCAGACCCCTCGGTGGAGCGGGCGGCTGAGGGCT +
Preference number: 6 (lower is better)
Translates to: CQSLQRDQQYLR*QTPRWSGRLRA
Trigger: AGCCCTCAGCCGCCCGCTCCACCGAGGGGTCTGCCATCTTAGATATTGCTGGTCTCGCTGCAGTGACTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS TCA 72 bp AACGGGAGCACCAGCCTCAATATCCAGGAGAACCCGTaGACAGCGCTGGGCTTGATCTCTCACCGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: NGSTSLNIQENP*TALGLISHRLP
Trigger: GGGCAGACGGTGAGAGATCAAGCCCAGCGCTGTTCACGGGTTCTCCTGGATATTGAGGCTGGTGCTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp GGACTACTGGACTCTTGGCCAACAGACAGTGTGGGTTaGGGCCCTTGCTGCTTGGTGGAGGTACTGGGCACA +
Preference number: 6 (lower is better)
Translates to: GLLDSWPTDSVG*GPCCLVEVLGT
Trigger: TGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp CACCATCCAGGGAGAAGCCCTGACACCAGCCCGGCATaGCTTCTGGATGAATCCCCCTTCCGATTCTCATCG +
Preference number: 6 (lower is better)
Translates to: HHPGRSPDTSPA*LLDESPFRFSS
Trigger: CGATGAGAATCGGAAGGGGGATTCATCCAGAAGGCATGCCGGGCTGGTGTCAGGGCTTCTCCCTGGATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp CAGATGCAAACACAGGCTCCAGGACGTAGTGATGGCTaGGACTCTCCATGCTCCTGGCCATGGCCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: QMQTQAPGRSDG*DSPCSWPWPPV
Trigger: CACAGGAGGCCATGGCCAGGAGCATGGAGAGTCGCAGCCATCACTACGTCCTGGAGCCTGTGTTTGCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489961.1
CDS CCA 72 bp GGCCAACAGACAGTGTGGGTTGCGGCCCTTGCTGCTTaGTGGAGGTACTGGGCACAAACTCACTCTTCAGGC +
Preference number: 6 (lower is better)
Translates to: GQQTVWVAALAA*WRYWAQTHSSG
Trigger: GCCTGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp CACACTCTCAGCTTTGATCTCCACGCCAGAGATCAATaGCGCTGCCACAGCCCCTGGGCTATCTCGGCTGGT +
Preference number: 6 (lower is better)
Translates to: HTLSFDLHARDQ*RCHSPWAISAG
Trigger: ACCAGCCGAGATAGCCCAGGGGCTGTGGCAGCGCCATTGATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp GTGGTCAGGGTGGCAAACCACAAAGTGCACCCCGTGTaGTTCCTCAGAGCAAAGGGGACAAATGGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: VVRVANHKVHPV*FLRAKGTNGCR
Trigger: CCGGCAGCCATTTGTCCCCTTTGCTCTGAGGAACCACACGGGGTGCACTTTGTGGTTTGCCACCCTGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp GAGAGAGTGCAGCTCTGGTGGGTGTGGTGGTCAGGGTaGCAAACCACAAAGTGCACCCCGTGTGGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: ERVQLWWVWWSG*QTTKCTPCGSS
Trigger: TGAGGAACCACACGGGGTGCACTTTGTGGTTTGCCACCCTGACCACCACACCCACCAGAGCTGCACTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp CAGGGAGAAGCCCTGACACCAGCCCGGCATGCCTTCTaGATGAATCCCCCTTCCGATTCTCATCGTGCAGAG +
Preference number: 6 (lower is better)
Translates to: QGEALTPARHAF*MNPPSDSHRAE
Trigger: CTCTGCACGATGAGAATCGGAAGGGGGATTCATCCAGAAGGCATGCCGGGCTGGTGTCAGGGCTTCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp TGGACTACTGGACTCTTGGCCAACAGACAGTGTGGGTaGCGGCCCTTGCTGCTTGGTGGAGGTACTGGGCAC +
Preference number: 6 (lower is better)
Translates to: WTTGLLANRQCG*RPLLLGGGTGH
Trigger: GTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp CTGGACTCTTGGCCAACAGACAGTGTGGGTTGCGGCCCTTGCTGCTaGGTGGAGGTACTGGGCACAAACTCACTCTTCAGGCTTCCTAGG +
Preference number: 6 (lower is better)
Translates to: LDSWPTDSVGCGPCC*VEVLGTNSLFRLPR
Trigger: CCTAGGAAGCCTGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 72 bp CCAATCCTTTGGGCCGGGCCTGTAGCCGCCAAGAAGTaGGGTGTAAAGGCACAGCAAACGAATCCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: PILWAGPVAAKK*GVKAQQTNPLA
Trigger: TGCCAGGGGATTCGTTTGCTGTGCCTTTACACCTCACTTCTTGGCGGCTACAGGCCCGGCCCAAAGGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 72 bp TCTGGGGCTCCCGGACAGGCTCCTGGAGAATCAAACTaGGGCTCCCGCAGACTCTCTGCTAGTTCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: SGAPGQAPGESN*GSRRLSASSSC
Trigger: ACAGGAAGAACTAGCAGAGAGTCTGCGGGAGCCTCAGTTTGATTCTCCAGGAGCCTGTCCGGGAGCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp GACTCCATGGAGGCATGTGGCTCCAACTTCACGTTGTaGAGAATGCCCTCAGGAGGCAGCCTCATTGCGTGG +
Preference number: 6 (lower is better)
Translates to: DSMEACGSNFTL*RMPSGGSLIAW
Trigger: CCACGCAATGAGGCTGCCTCCTGAGGGCATTCTGCACAACGTGAAGTTGGAGCCACATGCCTCCATGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp GACTCTTGGCCAACAGACAGTGTGGGTTGCGGCCCTTaGTGCTTGGTGGAGGTACTGGGCACAAACTCACTC +
Preference number: 6 (lower is better)
Translates to: DSWPTDSVGCGP*CLVEVLGTNSL
Trigger: GAGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp CAGATGCAAACACAGGCTCCAGGACGTAGTGATGGCTaGGACTCTCCATGCTCCTGGCCATGGCCTCCTGTA +
Preference number: 6 (lower is better)
Translates to: QMQTQAPGRSDG*DSPCSWPWPPV
Trigger: TACAGGAGGCCATGGCCAGGAGCATGGAGAGTCGCAGCCATCACTACGTCCTGGAGCCTGTGTTTGCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp GGGCCACATTCGGTCCAGAGACAGGAGACTGGGCCCTaGTATCCCGAAGGCTTCCCGTTGGAATATCAAAGC +
Preference number: 6 (lower is better)
Translates to: GPHSVQRQETGP*YPEGFPLEYQS
Trigger: GCTTTGATATTCCAACGGGAAGCCTTCGGGATAGCAGGGCCCAGTCTCCTGTCTCTGGACCGAATGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp TTCCTCCTGACTGTTGGCACTGCCAGACCCGGAAGGTaGGCAAAACATCCGGCTTCCTTCAGACCCAACAGC +
Preference number: 6 (lower is better)
Translates to: FLLTVGTARPGR*AKHPASFRPNS
Trigger: GCTGTTGGGTCTGAAGGAAGCCGGATGTTTTGCCCACCTTCCGGGTCTGGCAGTGCCAACAGTCAGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp CTTCTGGACTACTGGACTCTTGGCCAACAGACAGTGTaGGTTGCGGCCCTTGCTGCTTGGTGGAGGTACTGG +
Preference number: 6 (lower is better)
Translates to: LLDYWTLGQQTV*VAALAAWWRYW
Trigger: CCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp GGACTCAGGCTACGGGCCAGCTCATGCTCCTCAAACTaGCCTGCAGCATCTGTCTTGGCATTGTCCTGTCTG +
Preference number: 6 (lower is better)
Translates to: GLRLRASSCSSN*PAASVLALSCL
Trigger: CAGACAGGACAATGCCAAGACAGATGCTGCAGGCCAGTTTGAGGAGCATGAGCTGGCCCGTAGCCTGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
ENST00000646917.1
CDS CCA 72 bp CGAGACCAGCAATATCTAAGATGGCAGACCCCTCGGTaGAGCGGGCGGCTGAGGGCTTATTGGGATTGTGAG +
Preference number: 6 (lower is better)
Translates to: RDQQYLRWQTPR*SGRLRAYWDCE
Trigger: CTCACAATCCCAATAAGCCCTCAGCCGCCCGCTCCACCGAGGGGTCTGCCATCTTAGATATTGCTGGTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS CAA 72 bp CCAGACTCCATGGAGGCATGTGGCTCCAACTTCACGTaGTGCAGAATGCCCTCAGGAGGCAGCCTCATTGCG +
Preference number: 6 (lower is better)
Translates to: PDSMEACGSNFT*CRMPSGGSLIA
Trigger: CGCAATGAGGCTGCCTCCTGAGGGCATTCTGCACAACGTGAAGTTGGAGCCACATGCCTCCATGGAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp TGGCCAACAGACAGTGTGGGTTGCGGCCCTTGCTGCTaGGTGGAGGTACTGGGCACAAACTCACTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: WPTDSVGCGPCC*VEVLGTNSLFR
Trigger: CCTGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp GGACTCTTGGCCAACAGACAGTGTGGGTTGCGGCCCTaGCTGCTTGGTGGAGGTACTGGGCACAAACTCACT +
Preference number: 6 (lower is better)
Translates to: GLLANRQCGLRP*LLGGGTGHKLT
Trigger: AGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp TGGACTACTGGACTCTTGGCCAACAGACAGTGTGGGTTGCGGCCCTaGCTGCTTGGTGGAGGTACTGGGCACAAACTCACTCTTCAGGCT +
Preference number: 6 (lower is better)
Translates to: WTTGLLANRQCGLRP*LLGGGTGHKLTLQA
Trigger: AGCCTGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 72 bp CAGAACCACATGCAGTTGTTTGGCTCCAGCCCTACGTaGCTACAGACAGGGCAGGAGAGGCACAGCGCTCAT +
Preference number: 6 (lower is better)
Translates to: QNHMQLFGSSPT*LQTGQERHSAH
Trigger: ATGAGCGCTGTGCCTCTCCTGCCCTGTCTGTAGTCACGTAGGGCTGGAGCCAAACAACTGCATGTGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469054.1
CDS GCA 72 bp TGGAGGCATGTGGCTCCAACTTCACGTTGTGCAGAATaGCCTCAGGAGGCAGCCTCATTGCGTGGTTGTCTG +
Preference number: 6 (lower is better)
Translates to: WRHVAPTSRCAE*PQEAASLRGCL
Trigger: CAGACAACCACGCAATGAGGCTGCCTCCTGAGGGCATTCTGCACAACGTGAAGTTGGAGCCACATGCCTCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp GGGCCCCGTGCAGCAACGCGGTTTCCGAACCCTCTGTaGTTGAGTCCTAGATGGGTAAATGGACATAAAGCC +
Preference number: 6 (lower is better)
Translates to: GPRAATRFPNPL*LSPRWVNGHKA
Trigger: GGCTTTATGTCCATTTACCCATCTAGGACTCAAGCACAGAGGGTTCGGAAACCGCGTTGCTGCACGGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473099.1
CDS CCA 72 bp CAACAGACAGTGTGGGTTGCGGCCCTTGCTGCTTGGTaGAGGTACTGGGCACAAACTCACTCTTCAGGCTTC +
Preference number: 6 (lower is better)
Translates to: QQTVWVAALAAW*RYWAQTHSSGF
Trigger: GAAGCCTGAAGAGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp CCGATGCGGCCTCCTTGGAGACAGGCAGGTTTCCTGTaGTGTCAGCCCTGTTTCCTCCAGCAACATTATACC +
Preference number: 6 (lower is better)
Translates to: PMRPPWRQAGFL*CQPCFLQQHYT
Trigger: GGTATAATGTTGCTGGAGGAAACAGGGCTGACACCACAGGAAACCTGCCTGTCTCCAAGGAGGCCGCATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645148.1
CDS CAA 90 bp ATGGTCTTCTGGACTACTGGACTCTTGGCCAACAGACAGTGTGGGTaGCGGCCCTTGCTGCTTGGTGGAGGTACTGGGCACAAACTCACT +
Preference number: 6 (lower is better)
Translates to: MVFWTTGLLANRQCG*RPLLLGGGTGHKLT
Trigger: AGTGAGTTTGTGCCCAGTACCTCCACCAAGCAGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCCAGTAGTCCAGAAGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp AAAGGCCGTCACATTTACACAGTGGACTGGGCACTCTCACATGGCTaGGCACCTTGCTTGGGCCTGGTCTGTTTGAAGGGTAGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: KGRHIYTVDWALSHG*APCLGLVCLKGSRL
Trigger: GAGCCTGCTACCCTTCAAACAGACCAGGCCCAAGCAAGGTGCCAAGCCATGTGAGAGTGCCCAGTCCACTGTGTAAATGTGACGGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS TCA 72 bp CCACAGGTCAGTTTTCCTTCTCGGAAACTCCACGTCTaGGTTGTGCTTCGCCTGCGGTCAGGCTTTCTCAGC +
Preference number: 6 (lower is better)
Translates to: PQVSFPSRKLHV*VVLRLRSGFLS
Trigger: GCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCGAGAAGGAAAACTGACCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS TCA 72 bp CACATGGCTTGGCACCTTGCTTGGGCCTGGTCTGTTTaGAGGGTAGCAGGCTCTTCACATAGCTTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: HMAWHLAWAWSV*RVAGSSHSFSG
Trigger: GCCACTGAAGCTATGTGAAGAGCCTGCTACCCTTCAAACAGACCAGGCCCAAGCAAGGTGCCAAGCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS GCA 72 bp CAGGCTACGGGCCAGCTCATGCTCCTCAAACTGGCCTaGAGCATCTGTCTTGGCATTGTCCTGTCTGAAGAT +
Preference number: 6 (lower is better)
Translates to: QATGQLMLLKLA*SICLGIVLSED
Trigger: ATCTTCAGACAGGACAATGCCAAGACAGATGCTGCAGGCCAGTTTGAGGAGCATGAGCTGGCCCGTAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
ENST00000646917.1
CDS GCA 72 bp CTTCTCGGAAACTCCACGTCTGAGTTGTGCTTCGCCTaGGGTCAGGCTTTCTCAGCATCAGTGGCTCGTATC +
Preference number: 6 (lower is better)
Translates to: LLGNSTSELCFA*GQAFSASVARI
Trigger: GATACGAGCCACTGATGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS GCA 72 bp GATGTTGGTCAGTGCACTCTTACTGGGGAACTTCACTaGGTTGACTTGCACAGCTGGGCCGGTCTCGATGAC +
Preference number: 6 (lower is better)
Translates to: DVGQCTLTGELH*VDLHSWAGLDD
Trigger: GTCATCGAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGTAAGAGTGCACTGACCAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS GCA 72 bp ATCTCAGCAGCGGGGCTTCAGGAGTCCAGCTCCAGCTaGTCTCGGTTTTCGCTGAGTCTTAACATAAGCTGC +
Preference number: 6 (lower is better)
Translates to: ISAAGLQESSSS*SRFSLSLNISC
Trigger: GCAGCTTATGTTAAGACTCAGCGAAAACCGAGAGCAGCTGGAGCTGGACTCCTGAAGCCCCGCTGCTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000543766.2
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS GCA 72 bp TCCTTAGAGGACTGCTGTGAAGACCAAATAAAACAGTaGCCGCCAAGCCTGCTCCTGGCGGATGGTGAGCTG +
Preference number: 6 (lower is better)
Translates to: SLEDCCEDQIKQ*PPSLLLADGEL
Trigger: CAGCTCACCATCCGCCAGGAGCAGGCTTGGCGGGCACTGTTTTATTTGGTCTTCACAGCAGTCCTCTAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647414.1
CDS CCA 72 bp CACTGGATCCTGAAGTCCAGACTCCATGGAGGCATGTaGCTCCAACTTCACGTTGTGCAGAATGCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: HWILKSRLHGGM*LQLHVVQNALR
Trigger: CCTGAGGGCATTCTGCACAACGTGAAGTTGGAGCCACATGCCTCCATGGAGTCTGGACTTCAGGATCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp ATCGAGAAATGTTCCGTTCCCTTCTGGAACTACCCCTaGACTCCCACTGTGAGAGAGTGCAGCTCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: IEKCSVPFWNYP*TPTVRECSSGG
Trigger: CCCACCAGAGCTGCACTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACATTTCTCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp ACCCCCAGCTCAATGTTCTGGGATGTATCAGCTGTATaGAGAGCTGCCTCCTTGCCAGGTTTCAGCGTCCCA +
Preference number: 6 (lower is better)
Translates to: TPSSMFWDVSAV*RAASLPGFSVP
Trigger: TGGGACGCTGAAACCTGGCAAGGAGGCAGCTCTCCATACAGCTGATACATCCCAGAACATTGAGCTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp CAGTGCACTCTTACTGGGGAACTTCACTGCGTTGACTaGCACAGCTGGGCCGGTCTCGATGACCTCATTCTC +
Preference number: 6 (lower is better)
Translates to: QCTLTGELHCVD*HSWAGLDDLIL
Trigger: GAGAATGAGGTCATCGAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGTAAGAGTGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS CAA 90 bp CAATCCATGCAGTCATCGATGAAACAGATGCACACACTCTCAGCTTaGATCTCCACGCCAGAGATCAATGGCGCTGCCACAGCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: QSMQSSMKQMHTLSA*ISTPEINGAATAPG
Trigger: CCCAGGGGCTGTGGCAGCGCCATTGATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGTGCATCTGTTTCATCGATGACTGCATGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp GTAACCCACAGGTCAGTTTTCCTTCTCGGAAACTCCACGTCTGAGTaGTGCTTCGCCTGCGGTCAGGCTTTCTCAGCATCAGTGGCTCGT +
Preference number: 6 (lower is better)
Translates to: VTHRSVFLLGNSTSE*CFACGQAFSASVAR
Trigger: ACGAGCCACTGATGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCGAGAAGGAAAACTGACCTGTGGGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS TCA 72 bp CCGTTCCCTTCTGGAACTACCCCTGGACTCCCACTGTaGGAGAGTGCAGCTCTGGAACCAAATCAGATGACA +
Preference number: 6 (lower is better)
Translates to: PFPSGTTPGLPL*ESAALEPNQMT
Trigger: TGTCATCTGATTTGGTTCCAGAGCTGCACTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAAGGGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643711.1
CDS TCA 72 bp CCAGCTCTGGCACTGTGTGACCTTGGCAGCAGAGTTTaGTACTCCGTGTGTAACATTTCTGATGAGGCCCCC +
Preference number: 6 (lower is better)
Translates to: PALALCDLGSRV*YSVCNISDEAP
Trigger: GGGGGCCTCATCAGAAATGTTACACACGGAGTATCAAACTCTGCTGCCAAGGTCACACAGTGCCAGAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS GCA 72 bp GTGCCCAGGATCTCTTCAGGAATCCACTGCTCCTGTTaGTCTGCTGACAGTCCCTCAACCACATTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: VPRISSGIHCSC*SADSPSTTFPS
Trigger: AGAAGGGAATGTGGTTGAGGGACTGTCAGCAGAGCAACAGGAGCAGTGGATTCCTGAAGAGATCCTGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp AGGAGGAGCTGCGACTCCACCAGAACCTCGCGGGTATaGTGCTCCAACAACACAATGCTCTGGGTTAAATTC +
Preference number: 6 (lower is better)
Translates to: RRSCDSTRTSRV*CSNNTMLWVKF
Trigger: GAATTTAACCCAGAGCATTGTGTTGTTGGAGCAGCATACCCGCGAGGTTCTGGTGGAGTCGCAGCTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp CTTACTGGGGAACTTCACTGCGTTGACTTGCACAGCTaGGCCGGTCTCGATGACCTCATTCTCATTGCTCAG +
Preference number: 6 (lower is better)
Translates to: LTGELHCVDLHS*AGLDDLILIAQ
Trigger: CTGAGCAATGAGAATGAGGTCATCGAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS CCA 72 bp CCGTCACATTTACACAGTGGACTGGGCACTCTCACATaGCTTGGCACCTTGCTTGGGCCTGGTCTGTTTGAA +
Preference number: 6 (lower is better)
Translates to: PSHLHSGLGTLT*LGTLLGPGLFE
Trigger: TTCAAACAGACCAGGCCCAAGCAAGGTGCCAAGCCATGTGAGAGTGCCCAGTCCACTGTGTAAATGTGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS CCA 72 bp ACTACCATCAAAGGCCGTCACATTTACACAGTGGACTaGGCACTCTCACATGGCTTGGCACCTTGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: TTIKGRHIYTVD*ALSHGLAPCLG
Trigger: GCCCAAGCAAGGTGCCAAGCCATGTGAGAGTGCCCAGTCCACTGTGTAAATGTGACGGCCTTTGATGGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS CCA 72 bp AAGGGCCTTGTGCTGACATTGAGCCGCCTCTCAAAGTaGCTGTGCGCCGGATTTCTCTCATACAGCATCTCA +
Preference number: 6 (lower is better)
Translates to: KGLVLTLSRLSK*LCAGFLSYSIS
Trigger: TGAGATGCTGTATGAGAGAAATCCGGCGCACAGCCACTTTGAGAGGCGGCTCAATGTCAGCACAAGGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp ATCGAGAAATGTTCCGTTCCCTTCTGGAACTACCCCTaGACTCCCACTGTGAGAGAGTGCAGCTCTGGAACC +
Preference number: 6 (lower is better)
Translates to: IEKCSVPFWNYP*TPTVRECSSGT
Trigger: GGTTCCAGAGCTGCACTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACATTTCTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643711.1
CDS CAA 72 bp TCACGTTGTGCAGAATGCCCTCAGGAGGCAGCCTCATaGCGTGGTTGTCTGCAGTGGAGCCGATTCCAAAAA +
Preference number: 6 (lower is better)
Translates to: SRCAECPQEAAS*RGCLQWSRFQK
Trigger: TTTTTGGAATCGGCTCCACTGCAGACAACCACGCAATGAGGCTGCCTCCTGAGGGCATTCTGCACAACGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp CCCCGTGCAGCAACGCGGTTTCCGAACCCTCTGTGCTaGAGTCCTAGATGGGTAAATGGACATAAAGCCAAG +
Preference number: 6 (lower is better)
Translates to: PRAATRFPNPLC*SPRWVNGHKAK
Trigger: CTTGGCTTTATGTCCATTTACCCATCTAGGACTCAAGCACAGAGGGTTCGGAAACCGCGTTGCTGCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473099.1
CDS CAA 72 bp CACATTTACACAGTGGACTGGGCACTCTCACATGGCTaGGCACCTTGCTTGGGCCTGGTCTGTTTGAAGGGT +
Preference number: 6 (lower is better)
Translates to: HIYTVDWALSHG*APCLGLVCLKG
Trigger: ACCCTTCAAACAGACCAGGCCCAAGCAAGGTGCCAAGCCATGTGAGAGTGCCCAGTCCACTGTGTAAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS CAA 90 bp GATGTTGGTCAGTGCACTCTTACTGGGGAACTTCACTGCGTTGACTaGCACAGCTGGGCCGGTCTCGATGACCTCATTCTCATTGCTCAG +
Preference number: 6 (lower is better)
Translates to: DVGQCTLTGELHCVD*HSWAGLDDLILIAQ
Trigger: CTGAGCAATGAGAATGAGGTCATCGAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGTAAGAGTGCACTGACCAACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS TCA 72 bp CATTGGTGTCTCAAGTCTGTTCCTCACAATGAGGGCTaGCCGGACAGTGATGACTTTCCGTGCACTGCCTTC +
Preference number: 6 (lower is better)
Translates to: HWCLKSVPHNEG*PDSDDFPCTAF
Trigger: GAAGGCAGTGCACGGAAAGTCATCACTGTCCGGTCAGCCCTCATTGTGAGGAACAGACTTGAGACACCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000469054.1
ENST00000613099.4
ENST00000620676.6
ENST00000643711.1
ENST00000646917.1
CDS TCA 72 bp CACTGTGAGAGAGTGCAGCTCTGGAACCAAATCAGATaGCATCAGCCTGTCCCTGTTTCTTCCCAGCTCCCT +
Preference number: 6 (lower is better)
Translates to: HCERVQLWNQIR*HQPVPVSSQLP
Trigger: AGGGAGCTGGGAAGAAACAGGGACAGGCTGATGTCATCTGATTTGGTTCCAGAGCTGCACTCTCTCACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643711.1
CDS GCA 72 bp CTCTGGTGCCTTCGAGTATTCTCTCGGATGTCTCTCTaGAGCAAAGATGTCCATGTCCTGGAGATCCACGAC +
Preference number: 6 (lower is better)
Translates to: LWCLRVFSRMSL*SKDVHVLEIHD
Trigger: GTCGTGGATCTCCAGGACATGGACATCTTTGCTGCAGAGAGACATCCGAGAGAATACTCGAAGGCACCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp GCTTTGCGACAATCATCCATGCTGAATCCCAGCTCCTaGAGCCTAGCCAGCTGTAACTCCAAGACAGGATCT +
Preference number: 6 (lower is better)
Translates to: ALRQSSMLNPSS*SLASCNSKTGS
Trigger: AGATCCTGTCTTGGAGTTACAGCTGGCTAGGCTGCAGGAGCTGGGATTCAGCATGGATGATTGTCGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp TCAGTTTTCCTTCTCGGAAACTCCACGTCTGAGTTGTaGTTCGCCTGCGGTCAGGCTTTCTCAGCATCAGTG +
Preference number: 6 (lower is better)
Translates to: SVFLLGNSTSEL*FACGQAFSASV
Trigger: CACTGATGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCGAGAAGGAAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS CCA 72 bp GCTCCTCCGTGCTTGTCGTTTTCCTCAGACTGTGTTTaGGAATACCCGTTGGGGAAGCTGAAGGCACAGATT +
Preference number: 6 (lower is better)
Translates to: APPCLSFSSDCV*EYPLGKLKAQI
Trigger: AATCTGTGCCTTCAGCTTCCCCAACGGGTATTCCCAAACACAGTCTGAGGAAAACGACAAGCACGGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp AGCTCATGCTCCTCAAACTGGCCTGCAGCATCTGTCTaGGCATTGTCCTGTCTGAAGATCAGTGGCAACCCT +
Preference number: 6 (lower is better)
Translates to: SSCSSNWPAASV*ALSCLKISGNP
Trigger: AGGGTTGCCACTGATCTTCAGACAGGACAATGCCAAGACAGATGCTGCAGGCCAGTTTGAGGAGCATGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
ENST00000646917.1
CDS CAA 72 bp AGGTCAGTTTTCCTTCTCGGAAACTCCACGTCTGAGTaGTGCTTCGCCTGCGGTCAGGCTTTCTCAGCATCA +
Preference number: 6 (lower is better)
Translates to: RSVFLLGNSTSE*CFACGQAFSAS
Trigger: TGATGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCGAGAAGGAAAACTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000646411.1
CDS CAA 72 bp TACCACCATTCTCGGCAGTTCTTAGATATCGCCACCTaGGGTTTCCACCTTCGGAACTTCACCTGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: YHHSRQFLDIAT*GFHLRNFTCLS
Trigger: GGAGAGGCAGGTGAAGTTCCGAAGGTGGAAACCCAAGGTGGCGATATCTAAGAACTGCCGAGAATGGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489961.1
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp ATGGCCTGCGGATTGTATATGATGTTCAAGGGCCTTGTGCTGACATaGAGCCGCCTCTCAAAGTGGCTGTGCGCCGGATTTCTCTCATAC +
Preference number: 6 (lower is better)
Translates to: MACGLYMMFKGLVLT*SRLSKWLCAGFLSY
Trigger: GTATGAGAGAAATCCGGCGCACAGCCACTTTGAGAGGCGGCTCAATGTCAGCACAAGGCCCTTGAACATCATATACAATCCGCAGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp AGAAGGAGGTGGGGTCAAGGGATAGTCCTTGTCTTGGACTTCCTTTaGCTTTTTCCGGGACGCAGAGGTGGGCCTTTGATACAACTGGAA +
Preference number: 6 (lower is better)
Translates to: RRRWGQGIVLVLDFL*LFPGRRGGPLIQLE
Trigger: TTCCAGTTGTATCAAAGGCCCACCTCTGCGTCCCGGAAAAAGCAAAAGGAAGTCCAAGACAAGGACTATCCCTTGACCCCACCTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp GCCAGCTCATGCTCCTCAAACTGGCCTGCAGCATCTGTCTTGGCATaGTCCTGTCTGAAGATCAGTGGCAACCCTGTTTTGTTAATCAGC +
Preference number: 6 (lower is better)
Translates to: ASSCSSNWPAASVLA*SCLKISGNPVLLIS
Trigger: GCTGATTAACAAAACAGGGTTGCCACTGATCTTCAGACAGGACAATGCCAAGACAGATGCTGCAGGCCAGTTTGAGGAGCATGAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 72 bp CCAAGACAGGATCTAAGGTGTGTCTTGTCCCTTCTCTaGTTTCCTCTCCAACGCGAGATGCACCTGGAAGGT +
Preference number: 6 (lower is better)
Translates to: PRQDLRCVLSLL*FPLQREMHLEG
Trigger: ACCTTCCAGGTGCATCTCGCGTTGGAGAGGAAATCAGAGAAGGGACAAGACACACCTTAGATCCTGTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 72 bp TGTTATAGATCAGCCCTGGGCGGTTTCCTTGCTGGATaGCTTTCAAAGCTCGGACACCACTACCACCATCCA +
Preference number: 6 (lower is better)
Translates to: CYRSALGGFLAG*LSKLGHHYHHP
Trigger: TGGATGGTGGTAGTGGTGTCCGAGCTTTGAAAGTCATCCAGCAAGGAAACCGCCCAGGGCTGATCTATAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp AGCCAGGTCTCGAAGAAACAGTCCACCCAACCGGACTaGAAGCAACGAGGAATTTCTTCGAGGAAGAGACTC +
Preference number: 6 (lower is better)
Translates to: SQVSKKQSTQPD*KQRGISSRKRL
Trigger: GAGTCTCTTCCTCGAAGAAATTCCTCGTTGCTTTCAGTCCGGTTGGGTGGACTGTTTCTTCGAGACCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp CAGCTGAGTGAAATGCTGAATGAAGGCCACCACCTCTaGCTGGAAACGCTGAGTATGCACATACTGCACAGA +
Preference number: 6 (lower is better)
Translates to: QLSEMLNEGHHL*LETLSMHILHR
Trigger: TCTGTGCAGTATGTGCATACTCAGCGTTTCCAGGCAGAGGTGGTGGCCTTCATTCAGCATTTCACTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp GGAAGGGAAGATCAGATCTCCACTACTATCCTCTGGTaGCTTCGAGTATTCTCTCGGATGTCTCTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: GREDQISTTILW*LRVFSRMSLCS
Trigger: GCTGCAGAGAGACATCCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGTGGAGATCTGATCTTCCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp CTTGTGCTGACATTGAGCCGCCTCTCAAAGTGGCTGTaGGCCGGATTTCTCTCATACAGCATCTCAAAAACG +
Preference number: 6 (lower is better)
Translates to: LVLTLSRLSKWL*AGFLSYSISKT
Trigger: CGTTTTTGAGATGCTGTATGAGAGAAATCCGGCGCACAGCCACTTTGAGAGGCGGCTCAATGTCAGCACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp AGGAGCTGCGACTCCACCAGAACCTCGCGGGTATGCTaGTCCAACAACACAATGCTCTGGGTTAAATTCATT +
Preference number: 6 (lower is better)
Translates to: RSCDSTRTSRVC*SNNTMLWVKFI
Trigger: AATGAATTTAACCCAGAGCATTGTGTTGTTGGAGCAGCATACCCGCGAGGTTCTGGTGGAGTCGCAGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp GTTTCCGAACCCTCTGTGCTTGAGTCCTTAGAGGACTaGTGTGAAGACCAAATAAAACAGTGCCCGCCAAGC +
Preference number: 6 (lower is better)
Translates to: VSEPSVLESLED*CEDQIKQCPPS
Trigger: GCTTGGCGGGCACTGTTTTATTTGGTCTTCACAGCAGTCCTCTAAGGACTCAAGCACAGAGGGTTCGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647414.1
CDS CCA 72 bp GTTTGGTGTTCACTGGATCCTGAAGTCCAGACTCCATaGAGGCATGTGGCTCCAACTTCACGTTGTGCAGAA +
Preference number: 6 (lower is better)
Translates to: VWCSLDPEVQTP*RHVAPTSRCAE
Trigger: TTCTGCACAACGTGAAGTTGGAGCCACATGCCTCCATGGAGTCTGGACTTCAGGATCCAGTGAACACCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp GGGAAATTCTCCAGTGATACCCCCAGCTCAATGTTCTaGGATGTATCAGCTGTATGGAGAGCTGCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: GKFSSDTPSSMF*DVSAVWRAASL
Trigger: CAAGGAGGCAGCTCTCCATACAGCTGATACATCCCAGAACATTGAGCTGGGGGTATCACTGGAGAATTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp GAAATCCTAATTCGCTCAGAACCACATGCAGTTGTTTaGCTCCAGCCCTACGTGACTACAGACAGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: EILIRSEPHAVV*LQPYVTTDRAG
Trigger: TCCTGCCCTGTCTGTAGTCACGTAGGGCTGGAGCCAAACAACTGCATGTGGTTCTGAGCGAATTAGGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469054.1
CDS CCA 72 bp CAAACACTACCATCAAAGGCCGTCACATTTACACAGTaGACTGGGCACTCTCACATGGCTTGGCACCTTGCT +
Preference number: 6 (lower is better)
Translates to: QTLPSKAVTFTQ*TGHSHMAWHLA
Trigger: AGCAAGGTGCCAAGCCATGTGAGAGTGCCCAGTCCACTGTGTAAATGTGACGGCCTTTGATGGTAGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS CAA 72 bp TCAAAGAGCGATACCATCTCGCTATACTCGGCAGTCTaGGTAGCTAGTACTGTGGTGACTTTGGTGGCTGCG +
Preference number: 6 (lower is better)
Translates to: SKSDTISLYSAV*VASTVVTLVAA
Trigger: CGCAGCCACCAAAGTCACCACAGTACTAGCTACCAAGACTGCCGAGTATAGCGAGATGGTATCGCTCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp CAGTCATCGATGAAACAGATGCACACACTCTCAGCTTaGATCTCCACGCCAGAGATCAATGGCGCTGCCACA +
Preference number: 6 (lower is better)
Translates to: QSSMKQMHTLSA*ISTPEINGAAT
Trigger: TGTGGCAGCGCCATTGATCTCTGGCGTGGAGATCAAAGCTGAGAGTGTGTGCATCTGTTTCATCGATGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp GGATTGTATATGATGTTCAAGGGCCTTGTGCTGACATaGAGCCGCCTCTCAAAGTGGCTGTGCGCCGGATTT +
Preference number: 6 (lower is better)
Translates to: GLYMMFKGLVLT*SRLSKWLCAGF
Trigger: AAATCCGGCGCACAGCCACTTTGAGAGGCGGCTCAATGTCAGCACAAGGCCCTTGAACATCATATACAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp CAGGAGACTGGGCCCTGCTATCCCGAAGGCTTCCCGTaGGAATATCAAAGCTCAAGTTCTTATGTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: QETGPCYPEGFP*EYQSSSSYVKP
Trigger: TGGCTTCACATAAGAACTTGAGCTTTGATATTCCAACGGGAAGCCTTCGGGATAGCAGGGCCCAGTCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp TGCTCCTCAAACTGGCCTGCAGCATCTGTCTTGGCATaGTCCTGTCTGAAGATCAGTGGCAACCCTTTAGGA +
Preference number: 6 (lower is better)
Translates to: CSSNWPAASVLA*SCLKISGNPLG
Trigger: TCCTAAAGGGTTGCCACTGATCTTCAGACAGGACAATGCCAAGACAGATGCTGCAGGCCAGTTTGAGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646411.1
CDS CAA 90 bp CTTGGAGTTTCAAAGAGCGATACCATCTCGCTATACTCGGCAGTCTaGGTAGCTAGTACTGTGGTGACTTTGGTGGCTGCGCTTTTCAGC +
Preference number: 6 (lower is better)
Translates to: LGVSKSDTISLYSAV*VASTVVTLVAALFS
Trigger: GCTGAAAAGCGCAGCCACCAAAGTCACCACAGTACTAGCTACCAAGACTGCCGAGTATAGCGAGATGGTATCGCTCTTTGAAACTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp GTCCAGAGACAGGAGACTGGGCCCTGCTATCCCGAAGGCTTCCCGTaGGAATATCAAAGCTCAAGTTCTTATGTGAAGCCATCAAAAGGT +
Preference number: 6 (lower is better)
Translates to: VQRQETGPCYPEGFP*EYQSSSSYVKPSKG
Trigger: ACCTTTTGATGGCTTCACATAAGAACTTGAGCTTTGATATTCCAACGGGAAGCCTTCGGGATAGCAGGGCCCAGTCTCCTGTCTCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp ATTCTCCACAATCCTTGTAACTACGGAGGCGGTAACTaGATACCAATAGGACTCCCCTTTCTGCTGGCGGTC +
Preference number: 6 (lower is better)
Translates to: ILHNPCNYGGGN*IPIGLPFLLAV
Trigger: GACCGCCAGCAGAAAGGGGAGTCCTATTGGTATTCAGTTACCGCCTCCGTAGTTACAAGGATTGTGGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476169.1
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp TTTTCACACCTTCCACTGATGTACTCCCGCTCTGACTaGTGCCGATTGTCCATCGTCTTCCCTAAGCCATCT +
Preference number: 6 (lower is better)
Translates to: FSHLPLMYSRSD*CRLSIVFPKPS
Trigger: AGATGGCTTAGGGAAGACGATGGACAATCGGCATCAGTCAGAGCGGGAGTACATCAGTGGAAGGTGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543710.5
CDS TCA 72 bp TGCTGGCGGTCATTCTTCCATTTCTCCTCCAGGGCTTaGAGTAGTGCTTTCTTACGTTCCCTTTCCAACAGC +
Preference number: 6 (lower is better)
Translates to: CWRSFFHFSSRA*SSAFLRSLSNS
Trigger: GCTGTTGGAAAGGGAACGTAAGAAAGCACTACTTCAAGCCCTGGAGGAGAAATGGAAGAATGACCGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp AAGTATCTTGGGCTCATCCACTGTTGGAGAAGGAGGTaGGGTCAAGGGATAGTCCTTGTCTTGGACTTCCTT +
Preference number: 6 (lower is better)
Translates to: KYLGLIHCWRRR*GQGIVLVLDFL
Trigger: AAGGAAGTCCAAGACAAGGACTATCCCTTGACCCCACCTCCTTCTCCAACAGTGGATGAGCCCAAGATACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp ACTCTTTCCAACAAGTATCTTGGGCTCATCCACTGTTaGAGAAGGAGGTGGGGTCAAGGGATAGTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: TLSNKYLGLIHC*RRRWGQGIVLV
Trigger: GACAAGGACTATCCCTTGACCCCACCTCCTTCTCCAACAGTGGATGAGCCCAAGATACTTGTTGGAAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp ATTGTGAGTATCATCGAGAAATGTTCCGTTCCCTTCTaGAACTACCCCTGGACTCCCACTGTGAGAGAGTGC +
Preference number: 6 (lower is better)
Translates to: IVSIIEKCSVPF*NYPWTPTVREC
Trigger: GCACTCTCTCACAGTGGGAGTCCAGGGGTAGTTCCAGAAGGGAACGGAACATTTCTCGATGATACTCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000643711.1
ENST00000646917.1
CDS CCA 72 bp CCAAGAAAATCCACTGATCCCAGGATTCGAGCTGCCTaGCTGAGGAGTTCCTCCTGGAAATGTTTGAGGATA +
Preference number: 6 (lower is better)
Translates to: PRKSTDPRIRAA*LRSSSWKCLRI
Trigger: TATCCTCAAACATTTCCAGGAGGAACTCCTCAGCCAGGCAGCTCGAATCCTGGGATCAGTGGATTTTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000011700.10
ENST00000476045.5
ENST00000481484.1
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS CAA 72 bp CCTGTTACATTGACCTTGACCTCCAGGTGCCTTTCATaGGACACAGGAAGGGAAGACCGCTTGGTAACTACT +
Preference number: 6 (lower is better)
Translates to: PVTLTLTSRCLS*DTGREDRLVTT
Trigger: AGTAGTTACCAAGCGGTCTTCCCTTCCTGTGTCCAATGAAAGGCACCTGGAGGTCAAGGTCAATGTAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp TTCTGGGATGTATCAGCTGTATGGAGAGCTGCCTCCTaGCCAGGTTTCAGCGTCCCATTAATTGGCATTCCT +
Preference number: 6 (lower is better)
Translates to: FWDVSAVWRAAS*PGFSVPLIGIP
Trigger: AGGAATGCCAATTAATGGGACGCTGAAACCTGGCAAGGAGGCAGCTCTCCATACAGCTGATACATCCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp GTTTGCCGGATTTCTGCCTTGGTCTGCATCTTCAGCTaGTTATATTGTCTTCGGGCAGCTTCAGCCACTCTC +
Preference number: 6 (lower is better)
Translates to: VCRISALVCIFS*LYCLRAASATL
Trigger: GAGAGTGGCTGAAGCTGCCCGAAGACAATATAACAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp ACAGGAAGGGAAGACCGCTTGGTAACTACTCCACTCTTCACAGTTTaGGGAACTATAGCAGATTCGCTGCTAGAGTTACGGTGGCGAGAA +
Preference number: 6 (lower is better)
Translates to: TGREDRLVTTPLFTV*GTIADSLLELRWRE
Trigger: TTCTCGCCACCGTAACTCTAGCAGCGAATCTGCTATAGTTCCCAAAACTGTGAAGAGTGGAGTAGTTACCAAGCGGTCTTCCCTTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp CTTGACATCAATACCAATGTTATAGATCAGCCCTGGGCGGTTTCCTaGCTGGATGACTTTCAAAGCTCGGACACCACTACCACCATCCAG +
Preference number: 6 (lower is better)
Translates to: LDINTNVIDQPWAVS*LDDFQSSDTTTTIQ
Trigger: CTGGATGGTGGTAGTGGTGTCCGAGCTTTGAAAGTCATCCAGCAAGGAAACCGCCCAGGGCTGATCTATAACATTGGTATTGATGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp AGTTTGCCGGATTTCTGCCTTGGTCTGCATCTTCAGCTTGTTATATaGTCTTCGGGCAGCTTCAGCCACTCTCAGCTCAAGTTCAGACTG +
Preference number: 6 (lower is better)
Translates to: SLPDFCLGLHLQLVI*SSGSFSHSQLKFRL
Trigger: CAGTCTGAACTTGAGCTGAGAGTGGCTGAAGCTGCCCGAAGACAATATAACAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp CGATCAAGAGTTTGCCGGATTTCTGCCTTGGTCTGCATCTTCAGCTaGTTATATTGTCTTCGGGCAGCTTCAGCCACTCTCAGCTCAAGT +
Preference number: 6 (lower is better)
Translates to: RSRVCRISALVCIFS*LYCLRAASATLSSS
Trigger: ACTTGAGCTGAGAGTGGCTGAAGCTGCCCGAAGACAATATAACAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGCAAACTCTTGATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp CCAGAACCTCGCGGGTATGCTGCTCCAACAACACAATaGTCTGGGTTAAATTCATTACGGAGTCTTGCAAAC +
Preference number: 6 (lower is better)
Translates to: PEPRGYAAPTTQ*SGLNSLRSLAN
Trigger: GTTTGCAAGACTCCGTAATGAATTTAACCCAGAGCATTGTGTTGTTGGAGCAGCATACCCGCGAGGTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp ATAGGAAGGGAAGATCAGATCTCCACTACTATCCTCTaGTGCCTTCGAGTATTCTCTCGGATGTCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: IGREDQISTTIL*CLRVFSRMSLC
Trigger: GCAGAGAGACATCCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGTGGAGATCTGATCTTCCCTTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp ACCTCGCGGGTATGCTGCTCCAACAACACAATGCTCTaGGTTAAATTCATTACGGAGTCTTGCAAACTTCCC +
Preference number: 6 (lower is better)
Translates to: TSRVCCSNNTML*VKFITESCKLP
Trigger: GGGAAGTTTGCAAGACTCCGTAATGAATTTAACCCAGAGCATTGTGTTGTTGGAGCAGCATACCCGCGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp AGGTGCCTTTCATTGGACACAGGAAGGGAAGACCGCTaGGTAACTACTCCACTCTTCACAGTTTTGGGAACT +
Preference number: 6 (lower is better)
Translates to: RCLSLDTGREDR*VTTPLFTVLGT
Trigger: AGTTCCCAAAACTGTGAAGAGTGGAGTAGTTACCAAGCGGTCTTCCCTTCCTGTGTCCAATGAAAGGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp AATACCAATGTTATAGATCAGCCCTGGGCGGTTTCCTaGCTGGATGACTTTCAAAGCTCGGACACCACTACC +
Preference number: 6 (lower is better)
Translates to: NTNVIDQPWAVS*LDDFQSSDTTT
Trigger: GGTAGTGGTGTCCGAGCTTTGAAAGTCATCCAGCAAGGAAACCGCCCAGGGCTGATCTATAACATTGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp GATTTCTGCCTTGGTCTGCATCTTCAGCTTGTTATATaGTCTTCGGGCAGCTTCAGCCACTCTCAGCTCAAG +
Preference number: 6 (lower is better)
Translates to: DFCLGLHLQLVI*SSGSFSHSQLK
Trigger: CTTGAGCTGAGAGTGGCTGAAGCTGCCCGAAGACAATATAACAAGCTGAAGATGCAGACCAAGGCAGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp TTGACCTCCAGGTGCCTTTCATTGGACACAGGAAGGGAAGACCGCTaGGTAACTACTCCACTCTTCACAGTTTTGGGAACTATAGCAGAT +
Preference number: 6 (lower is better)
Translates to: LTSRCLSLDTGREDR*VTTPLFTVLGTIAD
Trigger: ATCTGCTATAGTTCCCAAAACTGTGAAGAGTGGAGTAGTTACCAAGCGGTCTTCCCTTCCTGTGTCCAATGAAAGGCACCTGGAGGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp TCAATTAGCACAGAAGTGATATTGATATCCAAACGAGGTTTGGCCTaGGCTTCTAGCTTCAGTCGAGGAGGATGGAGACGACTAGCTGCC +
Preference number: 6 (lower is better)
Translates to: SISTEVILISKRGLA*ASSFSRGGWRRLAA
Trigger: GGCAGCTAGTCGTCTCCATCCTCCTCGACTGAAGCTAGAAGCCAAGGCCAAACCTCGTTTGGATATCAATATCACTTCTGTGCTAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp TGTAAGGCCAGGTCTCCCTCAATCATTTCCAGGTGTGCTACTAATTaGGACACATTTGCTTTGGCAAGCTCACTGGTGGTCTTATTCAGC +
Preference number: 6 (lower is better)
Translates to: CKARSPSIISRCATN*DTFALASSLVVLFS
Trigger: GCTGAATAAGACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCAAATTAGTAGCACACCTGGAAATGATTGAGGGAGACCTGGCCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp TCTATGGGTTCTCCCAGGTTGTTCTCTAATAAGCCGCGGATCAGCTaGTATTTATACAGATCCAGAGAGCAGTGGACTGAGGAGAGATTG +
Preference number: 6 (lower is better)
Translates to: SMGSPRLFSNKPRIS*YLYRSREQWTEERL
Trigger: CAATCTCTCCTCAGTCCACTGCTCTCTGGATCTGTATAAATACAAGCTGATCCGCGGCTTATTAGAGAACAACCTGGGAGAACCCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp CTGCCGACGGTTGACGTCATAGAGTCGCATTCTCACCATATAGTTTaGGGTTCCAGGTGGAATGAGCAATTCTTTACAGAGGGGGAAATT +
Preference number: 6 (lower is better)
Translates to: LPTVDVIESHSHHIV*GSRWNEQFFTEGEI
Trigger: AATTTCCCCCTCTGTAAAGAATTGCTCATTCCACCTGGAACCCAAAACTATATGGTGAGAATGCGACTCTATGACGTCAACCGTCGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp CTCTACGATTTCCAAAATCCTTTCCAGCTCTGGCACTGTGTGACCTaGGCAGCAGAGTTTGATACTCCGTGTGTAACATTTCTGATGAGG +
Preference number: 6 (lower is better)
Translates to: LYDFQNPFQLWHCVT*AAEFDTPCVTFLMR
Trigger: CCTCATCAGAAATGTTACACACGGAGTATCAAACTCTGCTGCCAAGGTCACACAGTGCCAGAGCTGGAAAGGATTTTGGAAATCGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS GCA 72 bp GTCAGGCCGTCCGTATTTAAAAGTCTGGAAGATGAGTaGTTCTTCACCACTGGTAGTGAACCGTTCTCTGTA +
Preference number: 6 (lower is better)
Translates to: VRPSVFKSLEDE*FFTTGSEPFSV
Trigger: TACAGAGAACGGTTCACTACCAGTGGTGAAGAAGCACTCATCTTCCAGACTTTTAAATACGGACGGCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp AGCTGTGATCATCAGATGCTTGTAGATGTTGGTCAGTaGACTCTTACTGGGGAACTTCACTGCGTTGACTTG +
Preference number: 6 (lower is better)
Translates to: SCDHQMLVDVGQ*TLTGELHCVDL
Trigger: CAAGTCAACGCAGTGAAGTTCCCCAGTAAGAGTGCACTGACCAACATCTACAAGCATCTGATGATCACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS GCA 72 bp GCAGAGCCCCAGATTCCTAGAGCATGGCTTTCTTCCTaGTTTGTCATCACATTTCATACTCACAGGCTCATT +
Preference number: 6 (lower is better)
Translates to: AEPQIPRAWLSS*FVITFHTHRLI
Trigger: AATGAGCCTGTGAGTATGAAATGTGATGACAAAGCAGGAAGAAAGCCATGCTCTAGGAATCTGGGGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476169.1
CDS CCA 72 bp AAGGGAGAGACCGAGGCATATCAGGATATTCCACATTaGACACTGAGGGGCAAGACTGAGAAAGGTATTCTT +
Preference number: 6 (lower is better)
Translates to: KGETEAYQDIPH*TLRGKTEKGIL
Trigger: AAGAATACCTTTCTCAGTCTTGCCCCTCAGTGTCCAATGTGGAATATCCTGATATGCCTCGGTCTCTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp TTTGCCGGTATTGCAGCTGAGAGAGTTTCAAGGGAATaGTCTCCAGCTGAATATCACAATCAATACGGGGAC +
Preference number: 6 (lower is better)
Translates to: FAGIAAERVSRE*SPAEYHNQYGD
Trigger: GTCCCCGTATTGATTGTGATATTCAGCTGGAGACCATTCCCTTGAAACTCTCTCAGCTGCAATACCGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489961.1
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp TTCTCTACCACATGTGTTGGTCCCACGTCAATATCCTaGACATGCTTCCAATTGTCTTTCACTCGTCCAACC +
Preference number: 6 (lower is better)
Translates to: FSTTCVGPTSIS*TCFQLSFTRPT
Trigger: GGTTGGACGAGTGAAAGACAATTGGAAGCATGTCCAGGATATTGACGTGGGACCAACACATGTGGTAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp TACTCGGCAGTCTTGGTAGCTAGTACTGTGGTGACTTaGGTGGCTGCGCTTTTCAGCATACCTCGAAAATTT +
Preference number: 6 (lower is better)
Translates to: YSAVLVASTVVT*VAALFSIPRKF
Trigger: AAATTTTCGAGGTATGCTGAAAAGCGCAGCCACCAAAGTCACCACAGTACTAGCTACCAAGACTGCCGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp AGGTCTCCCTCAATCATTTCCAGGTGTGCTACTAATTaGGACACATTTGCTTTGGCAAGCTCACTGGTGGTC +
Preference number: 6 (lower is better)
Translates to: RSPSIISRCATN*DTFALASSLVV
Trigger: GACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCAAATTAGTAGCACACCTGGAAATGATTGAGGGAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp TCTCCCAGGTTGTTCTCTAATAAGCCGCGGATCAGCTaGTATTTATACAGATCCAGAGAGCAGTGGACTGAG +
Preference number: 6 (lower is better)
Translates to: SPRLFSNKPRIS*YLYRSREQWTE
Trigger: CTCAGTCCACTGCTCTCTGGATCTGTATAAATACAAGCTGATCCGCGGCTTATTAGAGAACAACCTGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp GAAGACCGCTTGGTAACTACTCCACTCTTCACAGTTTaGGGAACTATAGCAGATTCGCTGCTAGAGTTACGG +
Preference number: 6 (lower is better)
Translates to: EDRLVTTPLFTV*GTIADSLLELR
Trigger: CCGTAACTCTAGCAGCGAATCTGCTATAGTTCCCAAAACTGTGAAGAGTGGAGTAGTTACCAAGCGGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp CTCCTTTCGTTCCAGCTCCTTGAGGAATTCCATGATTaGCCGGTATTGCAGCTGAGAGAGTTTCAAGGGAAT +
Preference number: 6 (lower is better)
Translates to: LLSFQLLEEFHD*PVLQLREFQGN
Trigger: ATTCCCTTGAAACTCTCTCAGCTGCAATACCGGCAAATCATGGAATTCCTCAAGGAGCTGGAACGAAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000489961.1
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp CATCAAATTTACTCTTTCCAACAAGTATCTTGGGCTCATCCACTGTaGGAGAAGGAGGTGGGGTCAAGGGATAGTCCTTGTCTTGGACTT +
Preference number: 6 (lower is better)
Translates to: HQIYSFQQVSWAHPL*EKEVGSRDSPCLGL
Trigger: AAGTCCAAGACAAGGACTATCCCTTGACCCCACCTCCTTCTCCAACAGTGGATGAGCCCAAGATACTTGTTGGAAAGAGTAAATTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp TACTGGTCAATTAGCACAGAAGTGATATTGATATCCAAACGAGGTTaGGCCTTGGCTTCTAGCTTCAGTCGAGGAGGATGGAGACGACTA +
Preference number: 6 (lower is better)
Translates to: YWSISTEVILISKRG*ALASSFSRGGWRRL
Trigger: TAGTCGTCTCCATCCTCCTCGACTGAAGCTAGAAGCCAAGGCCAAACCTCGTTTGGATATCAATATCACTTCTGTGCTAATTGACCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp CTCGCTGCAACTGCAAATTCAGTTTGGCAAAGACATGATCTCGCTTaGTATACGTGTTCATACACGAGGCATCTGCAGTGGGGTCAAAAA +
Preference number: 6 (lower is better)
Translates to: LAATANSVWQRHDLA*YTCSYTRHLQWGQK
Trigger: TTTTTGACCCCACTGCAGATGCCTCGTGTATGAACACGTATACAAAGCGAGATCATGTCTTTGCCAAACTGAATTTGCAGTTGCAGCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp AAATCACCCACTAGCAAACGATCAAGAGTTTGCCGGATTTCTGCCTaGGTCTGCATCTTCAGCTTGTTATATTGTCTTCGGGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: KSPTSKRSRVCRISA*VCIFSLLYCLRAAS
Trigger: TGAAGCTGCCCGAAGACAATATAACAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGCAAACTCTTGATCGTTTGCTAGTGGGTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp TTCTGGATTCATCATCTCCCGCCACAAAATTCTGGATaGATATCTGTCCCAAGTGTCCCACCAACAACTCAG +
Preference number: 6 (lower is better)
Translates to: FWIHHLPPQNSG*ISVPSVPPTTQ
Trigger: CTGAGTTGTTGGTGGGACACTTGGGACAGATATTCATCCAGAATTTTGTGGCGGGAGATGATGAATCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp AGACCGAGGCATATCAGGATATTCCACATTGGACACTaGGGGGCAAGACTGAGAAAGGTATTCTTTTTGTGC +
Preference number: 6 (lower is better)
Translates to: RPRHIRIFHIGH*GARLRKVFFLC
Trigger: GCACAAAAAGAATACCTTTCTCAGTCTTGCCCCTCAGTGTCCAATGTGGAATATCCTGATATGCCTCGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp CTCTTGTTCGGTGACAGGAAGTTCATCCACTTCATATaGACGGCTGCTTTTCCGGTGGCAGAAATCTGTTAT +
Preference number: 6 (lower is better)
Translates to: LLFGDRKFIHFI*TAAFPVAEICY
Trigger: ATAACAGATTTCTGCCACCGGAAAAGCAGCCGTTCATATGAAGTGGATGAACTTCCTGTCACCGAACAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS TCA 72 bp CCTCGCTGCAACTGCAAATTCAGTTTGGCAAAGACATaGTCTCGCTTTGTATACGTGTTCATACACGAGGCA +
Preference number: 6 (lower is better)
Translates to: PRCNCKFSLAKT*SRFVYVFIHEA
Trigger: TGCCTCGTGTATGAACACGTATACAAAGCGAGATCATGTCTTTGCCAAACTGAATTTGCAGTTGCAGCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp CATCCGGCTTCCTTCAGACCCAACAGCTTCTCTACCTaGCAACTGGGTGCAATTCAAAGAATACAGTTTAAT +
Preference number: 6 (lower is better)
Translates to: HPASFRPNSFST*QLGAIQRIQFN
Trigger: ATTAAACTGTATTCTTTGAATTGCACCCAGTTGGCAGGTAGAGAAGCTGTTGGGTCTGAAGGAAGCCGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp CGGTGCAACATAAAGTCCCAGGTGCAACGTTTCCTCTaGTCTCTGATCTCATACAAGTTAGCATTCAAAGCA +
Preference number: 6 (lower is better)
Translates to: RCNIKSQVQRFL*SLISYKLAFKA
Trigger: TGCTTTGAATGCTAACTTGTATGAGATCAGAGAGCAGAGGAAACGTTGCACCTGGGACTTTATGTTGCACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp TCAATGAAATCACCCACTAGCAAACGATCAAGAGTTTaGCGGATTTCTGCCTTGGTCTGCATCTTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SMKSPTSKRSRV*RISALVCIFSL
Trigger: CAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGCAAACTCTTGATCGTTTGCTAGTGGGTGATTTCATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp TCACTTCTGGATTCATCATCTCCCGCCACAAAATTCTaGATGAATATCTGTCCCAAGTGTCCCACCAACAAC +
Preference number: 6 (lower is better)
Translates to: SLLDSSSPATKF*MNICPKCPTNN
Trigger: GTTGTTGGTGGGACACTTGGGACAGATATTCATCCAGAATTTTGTGGCGGGAGATGATGAATCCAGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp AGTTCATCCACTTCATATGAACGGCTGCTTTTCCGGTaGCAGAAATCTGTTATCTGGAGTGCTCTAGTTGGT +
Preference number: 6 (lower is better)
Translates to: SSSTSYERLLFR*QKSVIWSALVG
Trigger: ACCAACTAGAGCACTCCAGATAACAGATTTCTGCCACCGGAAAAGCAGCCGTTCATATGAAGTGGATGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS CCA 72 bp CTAGCAAACGATCAAGAGTTTGCCGGATTTCTGCCTTaGTCTGCATCTTCAGCTTGTTATATTGTCTTCGGG +
Preference number: 6 (lower is better)
Translates to: LANDQEFAGFLP*SASSACYIVFG
Trigger: CCCGAAGACAATATAACAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGCAAACTCTTGATCGTTTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp TGCTTCCAATTGTCTTTCACTCGTCCAACCATGATCTaGAGGTCCATAAATGACAGCGAGTACCTCTCATAC +
Preference number: 6 (lower is better)
Translates to: CFQLSFTRPTMI*RSINDSEYLSY
Trigger: GTATGAGAGGTACTCGCTGTCATTTATGGACCTCCAGATCATGGTTGGACGAGTGAAAGACAATTGGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp CTGGTAAGTTGCCTGAGAGCACGGCTCCTGGATATTTaGGATCTGAAGTATAAATCAATCGACGCTCTAACT +
Preference number: 6 (lower is better)
Translates to: LVSCLRARLLDI*DLKYKSIDALT
Trigger: AGTTAGAGCGTCGATTGATTTATACTTCAGATCCCAAATATCCAGGAGCCGTGCTCTCAGGCAACTTACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp CCACCAACTCCATTTGAATTTGTACGGGATCCACAATaGAAAGAGCTGTATCATGCTCATTCCCTAGTCGGC +
Preference number: 6 (lower is better)
Translates to: PPTPFEFVRDPQ*KELYHAHSLVG
Trigger: GCCGACTAGGGAATGAGCATGATACAGCTCTTTCAATTGTGGATCCCGTACAAATTCAAATGGAGTTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp TTCCAAAATCCTTTCCAGCTCTGGCACTGTGTGACCTaGGCAGCAGAGTTTGATACTCCGTGTGTAACATTT +
Preference number: 6 (lower is better)
Translates to: FQNPFQLWHCVT*AAEFDTPCVTF
Trigger: AAATGTTACACACGGAGTATCAAACTCTGCTGCCAAGGTCACACAGTGCCAGAGCTGGAAAGGATTTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645371.1
CDS TCA 72 bp GCCAAGAGAACCATTCATGTCAAACGTGCTACCCATTaGGACATTAACTTTGGTGCCACCTATACTTGCAGT +
Preference number: 6 (lower is better)
Translates to: AKRTIHVKRATH*DINFGATYTCS
Trigger: ACTGCAAGTATAGGTGGCACCAAAGTTAATGTCTCAATGGGTAGCACGTTTGACATGAATGGTTCTCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp TGGCAAGAAACAGCTGAACATCATTATAGGAGAGTCTaGTATCCAGGGCTTGTAACTGAATCTCCAGGACAG +
Preference number: 6 (lower is better)
Translates to: WQETAEHHYRRV*YPGLVTESPGQ
Trigger: CTGTCCTGGAGATTCAGTTACAAGCCCTGGATATCAGACTCTCCTATAATGATGTTCAGCTGTTTCTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 72 bp TCACCTGTAAGGACTTCTCGCCATTCACTAACATTGTaGGTATCATCGAGAAATGTTCCGTTCCCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: SPVRTSRHSLTL*VSSRNVPFPSG
Trigger: TCCAGAAGGGAACGGAACATTTCTCGATGATACTCACAATGTTAGTGAATGGCGAGAAGTCCTTACAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000643711.1
ENST00000646917.1
CDS TCA 72 bp GCATTCTCACCATATAGTTTTGGGTTCCAGGTGGAATaGGCAATTCTTTACAGAGGGGGAAATTCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: AFSPYSFGFQVE*AILYRGGNSPV
Trigger: CACTGGAGAATTTCCCCCTCTGTAAAGAATTGCTCATTCCACCTGGAACCCAAAACTATATGGTGAGAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 72 bp GACTTTGAATCCTGCCTCTACCATTTTCTGGCCATGTaGTCATGGATAAGTTGGTTACCTTCCTTAACCCTC +
Preference number: 6 (lower is better)
Translates to: DFESCLYHFLAM*SWISWLPSLTL
Trigger: GAGGGTTAAGGAAGGTAACCAACTTATCCATGATCACATGGCCAGAAAATGGTAGAGGCAGGATTCAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473099.1
CDS TCA 72 bp TTTCACTCGTCCAACCATGATCTGGAGGTCCATAAATaGCAGCGAGTACCTCTCATACATCTTTGTGCTCAT +
Preference number: 6 (lower is better)
Translates to: FHSSNHDLEVHK*QRVPLIHLCAH
Trigger: ATGAGCACAAAGATGTATGAGAGGTACTCGCTGTCATTTATGGACCTCCAGATCATGGTTGGACGAGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp AGACTTCAGAGGTTCCGCATTCTTAAACAACCAACTTaGTGCCTTTTTCAATTGGCCTTGACACGCCAAAAG +
Preference number: 6 (lower is better)
Translates to: RLQRFRILKQPT*CLFQLALTRQK
Trigger: CTTTTGGCGTGTCAAGGCCAATTGAAAAAGGCAGCAAGTTGGTTGTTTAAGAATGCGGAACCTCTGAAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp TACATCCTGTATGCTGAGTTCAAGCATGTGACTGGTTaGCAGCTGTGTATAGTGCACATTGATTCCTGTAAG +
Preference number: 6 (lower is better)
Translates to: YILYAEFKHVTG*QLCIVHIDSCK
Trigger: CTTACAGGAATCAATGTGCACTATACACAGCTGGCAACCAGTCACATGCTTGAACTCAGCATACAGGATGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS CCA 72 bp GAGTCGCATTCTCACCATATAGTTTTGGGTTCCAGGTaGAATGAGCAATTCTTTACAGAGGGGGAAATTCTC +
Preference number: 6 (lower is better)
Translates to: ESHSHHIVLGSR*NEQFFTEGEIL
Trigger: GAGAATTTCCCCCTCTGTAAAGAATTGCTCATTCCACCTGGAACCCAAAACTATATGGTGAGAATGCGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp TTTCTTGACATCAATACCAATGTTATAGATCAGCCCTaGGCGGTTTCCTTGCTGGATGACTTTCAAAGCTCG +
Preference number: 6 (lower is better)
Translates to: FLDINTNVIDQP*AVSLLDDFQSS
Trigger: CGAGCTTTGAAAGTCATCCAGCAAGGAAACCGCCCAGGGCTGATCTATAACATTGGTATTGATGTCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp GAGTCACTGTACCTCGCTGCAACTGCAAATTCAGTTTaGCAAAGACATGATCTCGCTTTGTATACGTGTTCA +
Preference number: 6 (lower is better)
Translates to: ESLYLAATANSV*QRHDLALYTCS
Trigger: TGAACACGTATACAAAGCGAGATCATGTCTTTGCCAAACTGAATTTGCAGTTGCAGCGAGGTACAGTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp ATGCCCACTGTCCGAAGAAGCAGTAAGTTCAGCCTATaGATTTCCACTGCAACCTCAGTGTTTTGTTCATAT +
Preference number: 6 (lower is better)
Translates to: MPTVRRSSKFSL*ISTATSVFCSY
Trigger: ATATGAACAAAACACTGAGGTTGCAGTGGAAATCCATAGGCTGAACTTACTGCTTCTTCGGACAGTGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp ACTGCAAATTCAGTTTGGCAAAGACATGATCTCGCTTaGTATACGTGTTCATACACGAGGCATCTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: TANSVWQRHDLA*YTCSYTRHLQW
Trigger: CCACTGCAGATGCCTCGTGTATGAACACGTATACAAAGCGAGATCATGTCTTTGCCAAACTGAATTTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp ACTAGCAAACGATCAAGAGTTTGCCGGATTTCTGCCTaGGTCTGCATCTTCAGCTTGTTATATTGTCTTCGG +
Preference number: 6 (lower is better)
Translates to: TSKRSRVCRISA*VCIFSLLYCLR
Trigger: CCGAAGACAATATAACAAGCTGAAGATGCAGACCAAGGCAGAAATCCGGCAAACTCTTGATCGTTTGCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp CCCTCAATCATTTCCAGGTGTGCTACTAATTTGGACACATTTGCTTaGGCAAGCTCACTGGTGGTCTTATTCAGCACTAGAGAAAGTGAA +
Preference number: 6 (lower is better)
Translates to: PSIISRCATNLDTFA*ASSLVVLFSTRESE
Trigger: TTCACTTTCTCTAGTGCTGAATAAGACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCAAATTAGTAGCACACCTGGAAATGATTGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp TGCACCAGTTCATATGCATTATTACCAGGATTTAGGAATTACGTGTaGCAGATCTTTTCTCCCCCGCAAAGGTGGAATTACAGCCCACAT +
Preference number: 6 (lower is better)
Translates to: CTSSYALLPGFRNYV*QIFSPPQRWNYSPH
Trigger: ATGTGGGCTGTAATTCCACCTTTGCGGGGGAGAAAAGATCTGCAACACGTAATTCCTAAATCCTGGTAATAATGCATATGAACTGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487188.1
CDS CAA 90 bp AGCAACAGCCTGGGAAAACAGAGAACAAGCACAGCTGACATTTCTTaGTGTCTCTTTCTAGAAGTACAAGGCAGACAGAAAGTCCACTTA +
Preference number: 6 (lower is better)
Translates to: SNSLGKQRTSTADIS*CLFLEVQGRQKVHL
Trigger: TAAGTGGACTTTCTGTCTGCCTTGTACTTCTAGAAAGAGACACAAAGAAATGTCAGCTGTGCTTGTTCTCTGTTTTCCCAGGCTGTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487188.1
CDS CAA 90 bp CACCTATACTTGCAGTTGCAATTTTTCTGCCATATTTCTCTCTATTaGCCATGCCCACTGTCCGAAGAAGCAGTAAGTTCAGCCTATGGA +
Preference number: 6 (lower is better)
Translates to: HLYLQLQFFCHISLY*PCPLSEEAVSSAYG
Trigger: TCCATAGGCTGAACTTACTGCTTCTTCGGACAGTGGGCATGGCAAATAGAGAGAAATATGGCAGAAAAATTGCAACTGCAAGTATAGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp GTAAAGGATTTGACTTCCTTCACTGACAATGACTTCTaGGAGGTGTTAGAAAGGCTGGAGTGGCTGAACAAT +
Preference number: 6 (lower is better)
Translates to: VKDLTSFTDNDF*EVLERLEWLNN
Trigger: ATTGTTCAGCCACTCCAGCCTTTCTAACACCTCTCAGAAGTCATTGTCAGTGAAGGAAGTCAAATCCTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp TATCTGGATTCTTTAATTTCTGCAGCTCTTGTTCGGTaGCAGGAAGTTCATCCACTTCATATGAACGGCTGC +
Preference number: 6 (lower is better)
Translates to: YLDSLISAALVR*QEVHPLHMNGC
Trigger: GCAGCCGTTCATATGAAGTGGATGAACTTCCTGTCACCGAACAAGAGCTGCAGAAATTAAAGAATCCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS TCA 72 bp AAGTACAAGGCAGACAGAAAGTCCACTTATTCACCCTaGGGAGAGATGAACCAGTACAATTACTTCACACAC +
Preference number: 6 (lower is better)
Translates to: KYKADRKSTYSP*GEMNQYNYFTH
Trigger: GTGTGTGAAGTAATTGTACTGGTTCATCTCTCCTCAGGGTGAATAAGTGGACTTTCTGTCTGCCTTGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487188.1
CDS TCA 72 bp GAAAACTCGAGCTGCATGAAAGCACTTTCATTCATTTaGGGAGTTCCTTGCTCCTTGTGTAACAGAGTCACT +
Preference number: 6 (lower is better)
Translates to: ENSSCMKALSFI*GVPCSLCNRVT
Trigger: AGTGACTCTGTTACACAAGGAGCAAGGAACTCCTCAAATGAATGAAAGTGCTTTCATGCAGCTCGAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp ATATTCATCATCACTAAACTGGGTCTCTTCAGATGCTaGCCCATCCCTACTTTTCCTCCTGGAGTTATCTTG +
Preference number: 6 (lower is better)
Translates to: IFIITKLGLFRC*PIPTFPPGVIL
Trigger: CAAGATAACTCCAGGAGGAAAAGTAGGGATGGGTCAGCATCTGAAGAGACCCAGTTTAGTGATGATGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp TATAAATCAATCGACGCTCTAACTGTAGGTGAACGTTaGACTTCTCTACCACATGTGTTGGTCCCACGTCAA +
Preference number: 6 (lower is better)
Translates to: YKSIDALTVGER*TSLPHVLVPRQ
Trigger: TTGACGTGGGACCAACACATGTGGTAGAGAAGTTCAACGTTCACCTACAGTTAGAGCGTCGATTGATTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS GCA 72 bp ATTTGTACGGGATCCACAATTGAAAGAGCTGTATCATaGTCATTCCCTAGTCGGCATGAAAACACCTCAATG +
Preference number: 6 (lower is better)
Translates to: ICTGSTIERAVS*SFPSRHENTSM
Trigger: CATTGAGGTGTTTTCATGCCGACTAGGGAATGAGCATGATACAGCTCTTTCAATTGTGGATCCCGTACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS GCA 72 bp TCCAATTCCTGCTCTGTATCTGGATTCTTTAATTTCTaGAGCTCTTGTTCGGTGACAGGAAGTTCATCCACT +
Preference number: 6 (lower is better)
Translates to: SNSCSVSGFFNF*SSCSVTGSSST
Trigger: AGTGGATGAACTTCCTGTCACCGAACAAGAGCTGCAGAAATTAAAGAATCCAGATACAGAGCAGGAATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000543710.5
ENST00000613099.4
ENST00000620676.6
ENST00000645371.1
ENST00000646411.1
CDS GCA 72 bp CTGTGCTTGAGTCCTAAAATGTCATGCACCCCAGTCTaGAACAGATGGTATTTGGAGAAACAAACAAGCAAA +
Preference number: 6 (lower is better)
Translates to: LCLSPKMSCTPV*NRWYLEKQTSK
Trigger: TTTGCTTGTTTGTTTCTCCAAATACCATCTGTTGCAGACTGGGGTGCATGACATTTTAGGACTCAAGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543766.2
CDS CAA 72 bp CAATCATTTCCAGGTGTGCTACTAATTTGGACACATTaGCTTTGGCAAGCTCACTGGTGGTCTTATTCAGCA +
Preference number: 6 (lower is better)
Translates to: QSFPGVLLIWTH*LWQAHWWSYSA
Trigger: TGCTGAATAAGACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCAAATTAGTAGCACACCTGGAAATGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp GTTGACGTCATAGAGTCGCATTCTCACCATATAGTTTaGGGTTCCAGGTGGAATGAGCAATTCTTTACAGAG +
Preference number: 6 (lower is better)
Translates to: VDVIESHSHHIV*GSRWNEQFFTE
Trigger: CTCTGTAAAGAATTGCTCATTCCACCTGGAACCCAAAACTATATGGTGAGAATGCGACTCTATGACGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp GCATTGTCCTGTCTGAAGATCAGTGGCAACCCTGTTTaGTTAATCAGCCAATATGGAGCAGAAATGAAGATC +
Preference number: 6 (lower is better)
Translates to: ALSCLKISGNPV*LISQYGAEMKI
Trigger: GATCTTCATTTCTGCTCCATATTGGCTGATTAACAAAACAGGGTTGCCACTGATCTTCAGACAGGACAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp TTAATGCAGATGCCAAAAGCAAAAGGATGGGAGGGATaGGTGACACCATCTTCAAAGCGTAAATGGACATCT +
Preference number: 6 (lower is better)
Translates to: LMQMPKAKGWEG*VTPSSKRKWTS
Trigger: AGATGTCCATTTACGCTTTGAAGATGGTGTCACCAATCCCTCCCATCCTTTTGCTTTTGGCATCTGCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476169.1
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp CCTCTACCATTTTCTGGCCATGTGATCATGGATAAGTaGGTTACCTTCCTTAACCCTCAGTTTCCGTTTTCT +
Preference number: 6 (lower is better)
Translates to: PLPFSGHVIMDK*VTFLNPQFPFS
Trigger: AGAAAACGGAAACTGAGGGTTAAGGAAGGTAACCAACTTATCCATGATCACATGGCCAGAAAATGGTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473099.1
CDS CAA 72 bp AAGAAAATCTTTCATCAGAATCTTGCAGACCAGGCCTaGCTAGAGTTTGACTCTGAATTGAAGATGCCCCTG +
Preference number: 6 (lower is better)
Translates to: KKIFHQNLADQA*LEFDSELKMPL
Trigger: CAGGGGCATCTTCAATTCAGAGTCAAACTCTAGCAAGGCCTGGTCTGCAAGATTCTGATGAAAGATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487188.1
CDS CAA 90 bp GTAGCACTGGCTGGATACTTATTCAGATCTTCACTGTACACGAGATaGTCCAGGGTTTGTAAAACCTGCTCATATACATGCTTTGCTAAC +
Preference number: 6 (lower is better)
Translates to: VALAGYLFRSSLYTR*SRVCKTCSYTCFAN
Trigger: GTTAGCAAAGCATGTATATGAGCAGGTTTTACAAACCCTGGACAATCTCGTGTACAGTGAAGATCTGAATAAGTATCCAGCCAGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CAA 90 bp AAGAATTCCCCACCAACTCCATTTGAATTTGTACGGGATCCACAATaGAAAGAGCTGTATCATGCTCATTCCCTAGTCGGCATGAAAACA +
Preference number: 6 (lower is better)
Translates to: KNSPPTPFEFVRDPQ*KELYHAHSLVGMKT
Trigger: TGTTTTCATGCCGACTAGGGAATGAGCATGATACAGCTCTTTCAATTGTGGATCCCGTACAAATTCAAATGGAGTTGGTGGGGAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 72 bp TTGTGCTCATTAAATGTGCTTGAAGCTGTTCTTCACTaGACTCAACTCCAGAAAAGGGAGGTGTTTTCTCTC +
Preference number: 6 (lower is better)
Translates to: LCSLNVLEAVLH*TQLQKREVFSL
Trigger: GAGAGAAAACACCTCCCTTTTCTGGAGTTGAGTTCAGTGAAGAACAGCTTCAAGCACATTTAATGAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp CTAATTTGGACACATTTGCTTTGGCAAGCTCACTGGTaGTCTTATTCAGCACTAGAGAAAGTGAATGAACCT +
Preference number: 6 (lower is better)
Translates to: LIWTHLLWQAHW*SYSALEKVNEP
Trigger: AGGTTCATTCACTTTCTCTAGTGCTGAATAAGACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCAAATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp GCTGGATACTTATTCAGATCTTCACTGTACACGAGATaGTCCAGGGTTTGTAAAACCTGCTCATATACATGC +
Preference number: 6 (lower is better)
Translates to: AGYLFRSSLYTR*SRVCKTCSYTC
Trigger: GCATGTATATGAGCAGGTTTTACAAACCCTGGACAATCTCGTGTACAGTGAAGATCTGAATAAGTATCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp AGTAGCCAGTCAAATATGAGAAACACACGGAGATTGTaGAGAACTACTGTAAAGCAGGAGGAATCCTTGGTA +
Preference number: 6 (lower is better)
Translates to: SSQSNMRNTRRL*RTTVKQEESLV
Trigger: TACCAAGGATTCCTCCTGCTTTACAGTAGTTCTCAACAATCTCCGTGTGTTTCTCATATTTGACTGGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp AACAGTAGCCAGTCAAATATGAGAAACACACGGAGATaGTTGAGAACTACTGTAAAGCAGGAGGAATCCTTG +
Preference number: 6 (lower is better)
Translates to: NSSQSNMRNTRR*LRTTVKQEESL
Trigger: CAAGGATTCCTCCTGCTTTACAGTAGTTCTCAACAATCTCCGTGTGTTTCTCATATTTGACTGGCTACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 72 bp GCTAGAGTTACGGTGGCGAGAAGGAGTAACATGATTTaGTTTCTTAATATCACTGGGAGTGTGGAGAAAATC +
Preference number: 6 (lower is better)
Translates to: ARVTVARRSNMI*FLNITGSVEKI
Trigger: GATTTTCTCCACACTCCCAGTGATATTAAGAAACAAAATCATGTTACTCCTTCTCGCCACCGTAACTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp TCTGTCTTGGCATTGTCCTGTCTGAAGATCAGTGGCAACCCTGTTTaGTTAATCAGCCAATATGGAGCAGAAATGAAGATCTTTAAGGAT +
Preference number: 6 (lower is better)
Translates to: SVLALSCLKISGNPV*LISQYGAEMKIFKD
Trigger: ATCCTTAAAGATCTTCATTTCTGCTCCATATTGGCTGATTAACAAAACAGGGTTGCCACTGATCTTCAGACAGGACAATGCCAAGACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CAA 90 bp AGAGAACCATTCATGTCAAACGTGCTACCCATTGAGACATTAACTTaGGTGCCACCTATACTTGCAGTTGCAATTTTTCTGCCATATTTC +
Preference number: 6 (lower is better)
Translates to: REPFMSNVLPIETLT*VPPILAVAIFLPYF
Trigger: GAAATATGGCAGAAAAATTGCAACTGCAAGTATAGGTGGCACCAAAGTTAATGTCTCAATGGGTAGCACGTTTGACATGAATGGTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CCA 72 bp CTACTAATTTGGACACATTTGCTTTGGCAAGCTCACTaGTGGTCTTATTCAGCACTAGAGAAAGTGAATGAA +
Preference number: 6 (lower is better)
Translates to: LLIWTHLLWQAH*WSYSALEKVNE
Trigger: TTCATTCACTTTCTCTAGTGCTGAATAAGACCACCAGTGAGCTTGCCAAAGCAAATGTGTCCAAATTAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS CCA 72 bp AATTCAACAGCACCTTTGAGAAGTGCAACTGAGAGCTaGTCAGTGTTCAGGTTATTGACATATTTTCCCAAA +
Preference number: 6 (lower is better)
Translates to: NSTAPLRSATES*SVFRLLTYFPK
Trigger: TTTGGGAAAATATGTCAATAACCTGAACACTGACCAGCTCTCAGTTGCACTTCTCAAAGGTGCTGTTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp TTCATGTCAAACGTGCTACCCATTGAGACATTAACTTaGGTGCCACCTATACTTGCAGTTGCAATTTTTCTG +
Preference number: 6 (lower is better)
Translates to: FMSNVLPIETLT*VPPILAVAIFL
Trigger: CAGAAAAATTGCAACTGCAAGTATAGGTGGCACCAAAGTTAATGTCTCAATGGGTAGCACGTTTGACATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000011700.10
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp TCATATGCATTATTACCAGGATTTAGGAATTACGTGTaGCAGATCTTTTCTCCCCCGCAAAGGTGGAATTAC +
Preference number: 6 (lower is better)
Translates to: SYALLPGFRNYV*QIFSPPQRWNY
Trigger: GTAATTCCACCTTTGCGGGGGAGAAAAGATCTGCAACACGTAATTCCTAAATCCTGGTAATAATGCATATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487188.1
CDS CAA 90 bp AAGGTCAGAGAAAATTACCTGTTTCCCTATTTCAGCAAATTTGATTaGTTGCAAATACACAAGAGACACCCATGCCTATCACAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: KVRENYLFPYFSKFD*LQIHKRHPCLSQKA
Trigger: TGCCTTCTGTGATAGGCATGGGTGTCTCTTGTGTATTTGCAACAAATCAAATTTGCTGAAATAGGGAAACAGGTAATTTTCTCTGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476169.1
CDS TCA 72 bp ACTGAATCTCCAGGACAGGTGGGAAATCTTCACTATTaGATGCATCCATCAATCCTGAACTATTTTGATAAG +
Preference number: 6 (lower is better)
Translates to: TESPGQVGNLHY*MHPSILNYFDK
Trigger: CTTATCAAAATAGTTCAGGATTGATGGATGCATTCAATAGTGAAGATTTCCCACCTGTCCTGGAGATTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011700.10
ENST00000460333.5
ENST00000487188.1
ENST00000613099.4
ENST00000620676.6
ENST00000646917.1
CDS TCA 72 bp CATTTAGTGAACAGAATTAACCTACAGTACTGCCTGTaGATACACCATGAAATAGCGGTTAAAGACCCTCAT +
Preference number: 6 (lower is better)
Translates to: HLVNRINLQYCL*IHHEIAVKDPH
Trigger: ATGAGGGTCTTTAACCGCTATTTCATGGTGTATTCACAGGCAGTACTGTAGGTTAATTCTGTTCACTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473099.1
CDS TCA 72 bp TACCTCTCATACATCTTTGTGCTCATTAAATGTGCTTaGAGCTGTTCTTCACTGAACTCAACTCCAGAAAAG +
Preference number: 6 (lower is better)
Translates to: YLSYIFVLIKCA*SCSSLNSTPEK
Trigger: CTTTTCTGGAGTTGAGTTCAGTGAAGAACAGCTTCAAGCACATTTAATGAGCACAAAGATGTATGAGAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS CAA 72 bp AACTTAATAAGGGACTCTTGCTCTTTGGTAAGAATTTaGTCAAGTGAAACACTAGTAGCTGATCGGTCGTTC +
Preference number: 6 (lower is better)
Translates to: NLIRDSCSLVRI*SSETLVADRSF
Trigger: GAACGACCGATCAGCTACTAGTGTTTCACTTGACAAAATTCTTACCAAAGAGCAAGAGTCCCTTATTAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6
CDS TCA 72 bp ATAATATCTAAATTATTCACCTGTAGGGAAATCACCTaGAGAGTACTGTCTAAATTCATCGATGGGCACTCT +
Preference number: 6 (lower is better)
Translates to: IISKLFTCREIT*RVLSKFIDGHS
Trigger: AGAGTGCCCATCGATGAATTTAGACAGTACTCTTCAGGTGATTTCCCTACAGGTGAATAATTTAGATATTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613099.4
ENST00000620676.6