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Pregenerated sensors for VHLL (Homo sapiens)

Ensembl gene IDs: ENSG00000189030

Ensembl transcript IDs: ENST00000339922.5

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CGCCCAACTCTTCCTGGCAGTACTCTTCTGGGCCTGCCTCCTGGGTaGCCGCCTGGGCCTCTAAACCCACCCCGTTCCCCGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RPTLPGSTLLGLPPG*PPGPLNPPRSPLSR
Trigger: CCTGGAGAGCGGGGAACGGGGTGGGTTTAGAGGCCCAGGCGGGCACCCAGGAGGCAGGCCCAGAAGAGTACTGCCAGGAAGAGTTGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS CCA 90 bp CCGTTCCCCGCTCTCCAGGGCATTACCTCCGAAGCCTTGACAACTTaGGCCTGCCCATACCAGTTCTTAAAGAGACTACTTCCGTTCACC +
Preference number: 5 (lower is better)
Translates to: PFPALQGITSEALTT*ACPYQFLKRLLPFT
Trigger: GGTGAACGGAAGTAGTCTCTTTAAGAACTGGTATGGGCAGGCCCAAGTTGTCAAGGCTTCGGAGGTAATGCCCTGGAGAGCGGGGAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS GCA 90 bp CCCGCTCTCCAGGGCATTACCTCCGAAGCCTTGACAACTTGGGCCTaGCCATACCAGTTCTTAAAGAGACTACTTCCGTTCACCCGGATT +
Preference number: 5 (lower is better)
Translates to: PALQGITSEALTTWA*PYQFLKRLLPFTRI
Trigger: AATCCGGGTGAACGGAAGTAGTCTCTTTAAGAACTGGTATGGGCAGGCCCAAGTTGTCAAGGCTTCGGAGGTAATGCCCTGGAGAGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS GCA 72 bp CTTCCTGGCAGTACTCTTCTGGGCCTGCCTCCTGGGTaGCCGCCTGGGCCTCTAAACCCACCCCGTTCCCCG +
Preference number: 6 (lower is better)
Translates to: LPGSTLLGLPPG*PPGPLNPPRSP
Trigger: CGGGGAACGGGGTGGGTTTAGAGGCCCAGGCGGGCACCCAGGAGGCAGGCCCAGAAGAGTACTGCCAGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS CCA 72 bp CAGTACTCTTCTGGGCCTGCCTCCTGGGTGCCCGCCTaGGCCTCTAAACCCACCCCGTTCCCCGCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: QYSSGPASWVPA*ASKPTPFPALQ
Trigger: CTGGAGAGCGGGGAACGGGGTGGGTTTAGAGGCCCAGGCGGGCACCCAGGAGGCAGGCCCAGAAGAGTACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS CCA 72 bp GCATCTCTGAAGAGCCAAGGGTGGCTTCGGAAGTTGTaGATGCGGAAGTCCCTGCCGGGCAGCAGCGTCAGG +
Preference number: 6 (lower is better)
Translates to: ASLKSQGWLRKL*MRKSLPGSSVR
Trigger: CCTGACGCTGCTGCCCGGCAGGGACTTCCGCATCCACAACTTCCGAAGCCACCCTTGGCTCTTCAGAGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS CAA 72 bp CTTGCATCTCTGAAGAGCCAAGGGTGGCTTCGGAAGTaGTGGATGCGGAAGTCCCTGCCGGGCAGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: LASLKSQGWLRK*WMRKSLPGSSV
Trigger: GACGCTGCTGCCCGGCAGGGACTTCCGCATCCACAACTTCCGAAGCCACCCTTGGCTCTTCAGAGATGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS CAA 72 bp CCGTTCCCCGCTCTCCAGGGCATTACCTCCGAAGCCTaGACAACTTGGGCCTGCCCATACCAGTTCTTAAAG +
Preference number: 6 (lower is better)
Translates to: PFPALQGITSEA*TTWACPYQFLK
Trigger: CTTTAAGAACTGGTATGGGCAGGCCCAAGTTGTCAAGGCTTCGGAGGTAATGCCCTGGAGAGCGGGGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS CAA 90 bp CCCGTTCCCCGCTCTCCAGGGCATTACCTCCGAAGCCTTGACAACTaGGGCCTGCCCATACCAGTTCTTAAAGAGACTACTTCCGTTCAC +
Preference number: 6 (lower is better)
Translates to: PVPRSPGHYLRSLDN*GLPIPVLKETTSVH
Trigger: GTGAACGGAAGTAGTCTCTTTAAGAACTGGTATGGGCAGGCCCAAGTTGTCAAGGCTTCGGAGGTAATGCCCTGGAGAGCGGGGAACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS CCA 72 bp GCCATAGTAGTTGAGCCACACAGGCAGCACGATTCGTaGGCTGTGATTGCAGATGATGATCCGGGAGAGCTC +
Preference number: 6 (lower is better)
Translates to: AIVVEPHRQHDS*AVIADDDPGEL
Trigger: GAGCTCTCCCGGATCATCATCTGCAATCACAGCCCACGAATCGTGCTGCCTGTGTGGCTCAACTACTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS CAA 90 bp AAACCCACCCCGTTCCCCGCTCTCCAGGGCATTACCTCCGAAGCCTaGACAACTTGGGCCTGCCCATACCAGTTCTTAAAGAGACTACTT +
Preference number: 6 (lower is better)
Translates to: KPTPFPALQGITSEA*TTWACPYQFLKRLL
Trigger: AAGTAGTCTCTTTAAGAACTGGTATGGGCAGGCCCAAGTTGTCAAGGCTTCGGAGGTAATGCCCTGGAGAGCGGGGAACGGGGTGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS CAA 72 bp CGCTCTCCAGGGCATTACCTCCGAAGCCTTGACAACTaGGGCCTGCCCATACCAGTTCTTAAAGAGACTACT +
Preference number: 6 (lower is better)
Translates to: RSPGHYLRSLDN*GLPIPVLKETT
Trigger: AGTAGTCTCTTTAAGAACTGGTATGGGCAGGCCCAAGTTGTCAAGGCTTCGGAGGTAATGCCCTGGAGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS GCA 72 bp CAGGGCATTACCTCCGAAGCCTTGACAACTTGGGCCTaGCCATACCAGTTCTTAAAGAGACTACTTCCGTTC +
Preference number: 6 (lower is better)
Translates to: QGITSEALTTWA*PYQFLKRLLPF
Trigger: GAACGGAAGTAGTCTCTTTAAGAACTGGTATGGGCAGGCCCAAGTTGTCAAGGCTTCGGAGGTAATGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS CCA 72 bp GCTCTCCAGGGCATTACCTCCGAAGCCTTGACAACTTaGGCCTGCCCATACCAGTTCTTAAAGAGACTACTT +
Preference number: 6 (lower is better)
Translates to: ALQGITSEALTT*ACPYQFLKRLL
Trigger: AAGTAGTCTCTTTAAGAACTGGTATGGGCAGGCCCAAGTTGTCAAGGCTTCGGAGGTAATGCCCTGGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339922.5
CDS CAA 72 bp GCATTGCTCTTTCAGGGTATACACTGCAGTGTGATGTaGGCAAAAACAGGCTGTCCATTAACATTGGAAGAT +
Preference number: 6 (lower is better)
Translates to: ALLFQGIHCSVM*AKTGCPLTLED
Trigger: ATCTTCCAATGTTAATGGACAGCCTGTTTTTGCCAACATCACACTGCAGTGTATACCCTGAAAGAGCAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339922.5