RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VGLL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000144560

Ensembl transcript IDs: ENST00000273038.7, ENST00000413604.5, ENST00000414047.1, ENST00000417206.6, ENST00000417466.5, ENST00000418000.5, ENST00000419541.4, ENST00000424529.6, ENST00000424709.5, ENST00000426568.5, ENST00000430365.7, ENST00000437722.1, ENST00000445411.5, ENST00000451674.6, ENST00000458499.5, ENST00000463387.1, ENST00000480288.1, ENST00000623028.1, ENST00000638314.1

Found 684 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGAGGTGACCACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTaGGCCTCTGGTGGGCCAGGTGGGACACAGCACACCCCAGGGGGA +
Preference number: 1 (lower is better)
Translates to: GEVTTPTSPGQVPSS*ASGGPGGTQHTPGG
Trigger: TCCCCCTGGGGTGTGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGACGATGGCACCTGACCAGGTGACGTGGGCGTGGTCACCTCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 90 bp GTGCACCAGGGACCCGGCCGCCAGCACCGCCGACCCCTCCCAGAGTaGCGCCCTTGTTCACTGACAAAGAGACCTGTCCCAGGAGTGTCC +
Preference number: 1 (lower is better)
Translates to: VHQGPGRQHRRPLPE*RPCSLTKRPVPGVS
Trigger: GGACACTCCTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGTCACTCTGGGAGGGGTCGGCGGTGCTGGCGGCCGGGTCCCTGGTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 90 bp GCCGCCAGCACCGCCGACCCCTCCCAGAGTGACGCCCTTGTTCACTaGCAAAGAGACCTGTCCCAGGAGTGTCCTCCACCGAGCCGGTCA +
Preference number: 1 (lower is better)
Translates to: AASTADPSQSDALVH*QRDLSQECPPPSRS
Trigger: TGACCGGCTCGGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGTCACTCTGGGAGGGGTCGGCGGTGCTGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR GCA 90 bp CAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTaGTCATCGCGAGGGCCTGCCAGGAGCTGGCCTCCCGCACTACTT +
Preference number: 1 (lower is better)
Translates to: QPAAKLQHPTPQLTH*SSRGPARSWPPALL
Trigger: AAGTAGTGCGGGAGGCCAGCTCCTGGCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 90 bp AATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGCTaGCCCACTGCTCATCGCGAGGGCCTGCCAGGAGCTGGCCTCCCG +
Preference number: 1 (lower is better)
Translates to: NDVSLQPNSSIPHRS*PTAHREGLPGAGLP
Trigger: CGGGAGGCCAGCTCCTGGCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 90 bp GGGGGTCATACGGTGTGCAGAGTCCACAAAGCCTTGCAGGTGAGGTaGCCACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTGAGCCT +
Preference number: 1 (lower is better)
Translates to: GGHTVCRVHKALQVR*PRPRHLVRCHRREP
Trigger: AGGCTCACGACGATGGCACCTGACCAGGTGACGTGGGCGTGGTCACCTCACCTGCAAGGCTTTGTGGACTCTGCACACCGTATGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 90 bp AAACCGGGGGTCATACGGTGTGCAGAGTCCACAAAGCCTTGCAGGTaGGGTGACCACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTG +
Preference number: 1 (lower is better)
Translates to: KPGVIRCAESTKPCR*GDHAHVTWSGAIVV
Trigger: CACGACGATGGCACCTGACCAGGTGACGTGGGCGTGGTCACCTCACCTGCAAGGCTTTGTGGACTCTGCACACCGTATGACCCCCGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR CCA 90 bp AAAGAGACCTGTCCCAGGAGTGTCCTCCACCGAGCCGGTCAGCTGTaGGTGGTTTTCCTGTTACGACGCTCAGTAGCCTGTAGCAATAAC +
Preference number: 1 (lower is better)
Translates to: KETCPRSVLHRAGQL*VVFLLRRSVACSNN
Trigger: GTTATTGCTACAGGCTACTGAGCGTCGTAACAGGAAAACCACCCACAGCTGACCGGCTCGGTGGAGGACACTCCTGGGACAGGTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 90 bp ATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTaGGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACA +
Preference number: 1 (lower is better)
Translates to: IHTHTHGPNQTRRGS*ATHTPVSRSKGKST
Trigger: TGTGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
3UTR GCA 90 bp GGTATATTACAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTaGAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTT +
Preference number: 1 (lower is better)
Translates to: GILQIYTHEEKVRAH*RQRGSGKNFTEPLL
Trigger: AAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGTAATATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 90 bp CACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACAAAGCGTCTaGGTCACCAATTCATCATGGCTTGTGACTGAGAAAGCGCTGTGG +
Preference number: 1 (lower is better)
Translates to: HTPRSQEAKEKAQSV*VTNSSWLVTEKALW
Trigger: CCACAGCGCTTTCTCAGTCACAAGCCATGATGAATTGGTGACTCAGACGCTTTGTGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
3UTR TCA 90 bp AAAATGCCCGTGATTGGTAGAGTCTGCAGTCCAGTTGCAAGCACCTaGAATCTAGAGAGAGAAAGACCTATAACCTGTATGAGACTTCCC +
Preference number: 1 (lower is better)
Translates to: KMPVIGRVCSPVAST*NLERERPITCMRLP
Trigger: GGGAAGTCTCATACAGGTTATAGGTCTTTCTCTCTCTAGATTTCAGGTGCTTGCAACTGGACTGCAGACTCTACCAATCACGGGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR CCA 90 bp AAATGCAGTAATAACAGTATAAAGTCAGAGGAATGTATACTGCCTTaGCCCCAGCGTACGAGGAAGCGTATAAAACACCATATCACAGAT +
Preference number: 1 (lower is better)
Translates to: KCSNNSIKSEECILP*PQRTRKRIKHHITD
Trigger: ATCTGTGATATGGTGTTTTATACGCTTCCTCGTACGCTGGGGCCAAGGCAGTATACATTCCTCTGACTTTATACTGTTATTACTGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR CAA 90 bp GGGACCCGGCCGCCAGCACCGCCGACCCCTCCCAGAGTGACGCCCTaGTTCACTGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACCGA +
Preference number: 2 (lower is better)
Translates to: GTRPPAPPTPPRVTP*FTDKETCPRSVLHR
Trigger: TCGGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGTCACTCTGGGAGGGGTCGGCGGTGCTGGCGGCCGGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CCA 90 bp AGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCAGCGCTGTGGAGTCCTaGCCCCGTCGGGGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: SQTPASHTAADPLLIARASAVES*PRRGSR
Trigger: TCTGCTGCCCCGACGGGGCCAGGACTCCACAGCGCT...GGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGATCGTCGTGAGCCTCTaGTGGGCCAGGTGGGACACA +
Preference number: 2 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGIVVSL*WARWDT
Trigger: TGTGTCCCACCTGGCCCACCAGAGGCTCACGACGAT...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR TCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGCCAGTACAGTGGGAGTaGAATGTGTGCGGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGPVQWE*NVCGAR
Trigger: CCTTGCCCCGCACACATTTCACTCCCACTGTACTGG...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR GCA 90 bp CAGCCACTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTCACCCAGTGCCAACCGCAGCTGACCCACTaGTCATCGCGAGGGCCTGCC +
Preference number: 2 (lower is better)
Translates to: QPLCDYKSQSSDLFTQCQPQLTH*SSRGPA
Trigger: GGCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGG...TTGGCACTGGGTGAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR GCA 90 bp CCTCCACCGAGCCGGTCAGCTGTGGGTGGTTTTCCTGTTACGACGCTCAGTAGCCGTCACCTGGTCAGGTaGCATCGTCGTGAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: PPPSRSAVGGFPVTTLSSRHLVR*HRREPL
Trigger: CAGAGGCTCACGACGATGGCACCTGACCAGGTGACG...GCTACTGAGCGTCGTAACAGGAAAACCACCCACAGCTGACCGGCTCGGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR TCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGATCATGGCTTGTGACTaGGAAAGCGCTGTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGIMACD*ESAVES
Trigger: GGACTCCACAGCGCTTTCTCAGTCACAAGCCATGAT...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR GCA 90 bp TTACAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGGCTCCCAGATAGGTCAGTaGACCAGGGACCCGGCCGCC +
Preference number: 2 (lower is better)
Translates to: LQIYTHEEKVRAHCRQRGSQIGQ*TRDPAA
Trigger: GGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGA...GCCGCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CCA 90 bp CCTCCACCGAGCCGGTCAGCTGTGGGTGGTTTTCCTGTTACGACGCTCAGTAGCGAACCAAACACGCCGTaGAAGCTGAGCCACACACAC +
Preference number: 2 (lower is better)
Translates to: PPPSRSAVGGFPVTTLSSEPNTP*KLSHTH
Trigger: GTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTC...GCTACTGAGCGTCGTAACAGGAAAACCACCCACAGCTGACCGGCTCGGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR TCA 90 bp GTGGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTATCCTGCTATCATGTTTaGGGGCCCCCTTGTACGGAT +
Preference number: 2 (lower is better)
Translates to: VESWPRRGSRPASEVSLVSCYHV*GPPCTD
Trigger: ATCCGTACAAGGGGGCCCTCAAACATGATAGCAGGA...TACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
3UTR-3UTR GCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGAGCTCAGGCAAACCATaGAGATCCACGTGTTGTTGG +
Preference number: 2 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGSSGKP*RSTCCW
Trigger: CCAACAACACGTGGATCTGCATGGTTTGCCTGAGCT...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR TCA 90 bp AGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCAAGATAAAATGCCCGTaGTTGGTAGAGTCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: SQTPASHTAADPLLIARAKIKCP*LVESAV
Trigger: GACTGCAGACTCTACCAATCACGGGCATTTTATCTT...GGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CCA 90 bp ACTTCACGGAGCCCCTTCTTAGAGCAGGGAGGGGGCTTTCTCAGTGAAATGTTTGTCGTGAGCCTCTGGTaGGCCAGGTGGGACACAGCA +
Preference number: 2 (lower is better)
Translates to: TSRSPFLEQGGGFLSEMFVVSLW*ARWDTA
Trigger: TGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGAC...AAACATTTCACTGAGAAAGCCCCCTCCCTGCTCTAAGAAGGGGCTCCGTGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CCA 90 bp GTCAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTAGCGCTGTGGAGTCCTaGCCCCGTCGGGGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: VSNLLFSQESSKGAVSACSAVES*PRRGSR
Trigger: TCTGCTGCCCCGACGGGGCCAGGACTCCACAGCGCT...ACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCAGATTACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CCA 90 bp TTACAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGGCGAACCAAACACGCCGTaGAAGCTGAGCCACACACAC +
Preference number: 2 (lower is better)
Translates to: LQIYTHEEKVRAHCRQRGEPNTP*KLSHTH
Trigger: GTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTC...GCCGCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGACGTTTAAAGCACTATaGAATCCTCCAACCTCAGCT +
Preference number: 2 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGTFKAL*NPPTSA
Trigger: AGCTGAGGTTGGAGGATTCCATAGTGCTTTAAACGT...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR CAA 90 bp GAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTaGGTAACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGT +
Preference number: 2 (lower is better)
Translates to: ESWPRRGSRPASEVS*VTEAGSKDATLDRC
Trigger: ACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
3UTR-3UTR TCA 90 bp TACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAGTGGGACCTGCAGCCACTCTGTaGCTACAAGAGCCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: YRKYRGLNAKAWKPSTVGPAATL*LQEPVL
Trigger: GAGGACTGGCTCTTGTAGTCACAGAGTGGCTGCAGG...TCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR GCA 90 bp ACGCCCTTGTTCACTGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACCGAGCCTGTCTGTCAGTAATCTaGTGTTCAGCCAAGAGAGTT +
Preference number: 2 (lower is better)
Translates to: TPLFTDKETCPRSVLHRACLSVI*CSAKRV
Trigger: AACTCTCTTGGCTGAACAGCAGATTACTGACAGACA...GGCTCGGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR TCA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCATTCATCATGGCTTGTaGCTGAGAAAGCGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSIHHGL*LRKRCG
Trigger: TCCACAGCGCTTTCTCAGTCACAAGCCATGATGAAT...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
3UTR-3UTR GCA 90 bp CAGTGTTCTCATAGAATAACTGTTCCTGCACTTTTACAGACAAATCTACGACAACTCATCGCGAGGGCCTaGCAGGAGCTGGCCTCCCGC +
Preference number: 2 (lower is better)
Translates to: QCSHRITVPALLQTNLRQLIARA*QELASR
Trigger: GCGGGAGGCCAGCTCCTGGCAGGCCCTCGCGATGAG...TTGTCGTAGATTTGTCTGTAAAAGTGCAGGAACAGTTATTCTATGAGAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR TCA 90 bp TTACAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGGCCCAGTTGCAAGCACCTaGAATCTAGAGAGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: LQIYTHEEKVRAHCRQRGPVAST*NLERER
Trigger: TCTTTCTCTCTCTAGATTTCAGGTGCTTGCAACTGG...GCCGCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR TCA 90 bp ACTTCACGGAGCCCCTTCTTAGAGCAGGGAGGGGGCTTTCTCAGTGAAATGTTTGAAAATATAGGGGCCTaGATGCCAAAGCTTGGAAGC +
Preference number: 2 (lower is better)
Translates to: TSRSPFLEQGGGFLSEMFENIGA*MPKLGS
Trigger: GCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTC...AAACATTTCACTGAGAAAGCCCCCTCCCTGCTCTAAGAAGGGGCTCCGTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR GCA 90 bp AGCACTATGGAATCCTCCAACCTCAGCTCTAGTCTAACAAACTGCAGTGTTCAGTCGGGGCAGCAGACCTaGATCAGAGGTTTCTTTGGT +
Preference number: 2 (lower is better)
Translates to: STMESSNLSSSLTNCSVQSGQQT*IRGFFG
Trigger: ACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGA...CTGAACACTGCAGTTTGTTAGACTAGAGCTGAGGTTGGAGGATTCCATAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR GCA 90 bp CTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTCACCCAGTGCCAATTTCCATGTTTTTCAGCAGTTTaGCCTCAGAGTTCTGGCATA +
Preference number: 2 (lower is better)
Translates to: LCDYKSQSSDLFTQCQFPCFSAV*PQSSGI
Trigger: TATGCCAGAACTCTGAGGGCAAACTGCTGAAAAACA...TGGAAATTGGCACTGGGTGAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CCA 90 bp TACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAGTCACCAATTCATCATaGCTTGTGACTGAGAAAGCG +
Preference number: 2 (lower is better)
Translates to: YRKYRGLNAKAWKPSTVGVTNSS*LVTEKA
Trigger: CGCTTTCTCAGTCACAAGCCATGATGAATTGGTGAC...TCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR GCA 90 bp AGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTTCCAGCTCAGGCAAACCATaGAGATCCACGTGTTGTTGG +
Preference number: 2 (lower is better)
Translates to: RTQIPTTWFLQINHPFPSSSGKP*RSTCCW
Trigger: CCAACAACACGTGGATCTGCATGGTTTGCCTGAGCT...GGAAGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
3UTR-3UTR TCA 90 bp CAGTGTTCTCATAGAATAACTGTTCCTGCACTTTTACAGACAAATCTACGACAATCCTGCTATCATGTTTaGGGGCCCCCTTGTACGGAT +
Preference number: 2 (lower is better)
Translates to: QCSHRITVPALLQTNLRQSCYHV*GPPCTD
Trigger: ATCCGTACAAGGGGGCCCTCAAACATGATAGCAGGA...TTGTCGTAGATTTGTCTGTAAAAGTGCAGGAACAGTTATTCTATGAGAACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR GCA 90 bp CAGTGTTCTCATAGAATAACTGTTCCTGCACTTTTACAGACAAATCTACGACAAGACCTTTTCACCCAGTaGCAATTTCCAAAATTCAAC +
Preference number: 2 (lower is better)
Translates to: QCSHRITVPALLQTNLRQDLFTQ*QFPKFN
Trigger: GTTGAATTTTGGAAATTGGCACTGGGTGAAAAGGTC...TTGTCGTAGATTTGTCTGTAAAAGTGCAGGAACAGTTATTCTATGAGAACACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR GCA 72 bp CCCCCTCCAGGGTACTGCCTATCCCAGATAGGTCAGTaGACCAGGGACCCGGCCGCCAGCACCGCCGACCCC +
Preference number: 3 (lower is better)
Translates to: PPPGYCLSQIGQ*TRDPAASTADP
Trigger: GGGGTCGGCGGTGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGGAGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR GCA 72 bp GCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTaGTCATCGCGAGGGCCTGCCAGGAGCTGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: AKLQHPTPQLTH*SSRGPARSWPP
Trigger: GGGAGGCCAGCTCCTGGCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR CCA 72 bp CACGTCACCTGGTCAGGTGCCATCGTCGTGAGCCTCTaGTGGGCCAGGTGGGACACAGCACACCCCAGGGGG +
Preference number: 3 (lower is better)
Translates to: HVTWSGAIVVSL*WARWDTAHPRG
Trigger: CCCCCTGGGGTGTGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGACGATGGCACCTGACCAGGTGACGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 72 bp ACCACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTaGGCCTCTGGTGGGCCAGGTGGGACACAGCACACC +
Preference number: 3 (lower is better)
Translates to: TTPTSPGQVPSS*ASGGPGGTQHT
Trigger: GGTGTGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGACGATGGCACCTGACCAGGTGACGTGGGCGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 72 bp GGACCCGGCCGCCAGCACCGCCGACCCCTCCCAGAGTaGCGCCCTTGTTCACTGACAAAGAGACCTGTCCCA +
Preference number: 3 (lower is better)
Translates to: GPGRQHRRPLPE*RPCSLTKRPVP
Trigger: TGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGTCACTCTGGGAGGGGTCGGCGGTGCTGGCGGCCGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 72 bp AGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGCTaGCCCACTGCTCATCGCGAGGGCCTGCCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: SLQPNSSIPHRS*PTAHREGLPGA
Trigger: AGCTCCTGGCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 72 bp ACCGCCGACCCCTCCCAGAGTGACGCCCTTGTTCACTaGCAAAGAGACCTGTCCCAGGAGTGTCCTCCACCG +
Preference number: 3 (lower is better)
Translates to: TADPSQSDALVH*QRDLSQECPPP
Trigger: CGGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGTCACTCTGGGAGGGGTCGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 72 bp ACGGTGTGCAGAGTCCACAAAGCCTTGCAGGTGAGGTaGCCACGCCCACGTCACCTGGTCAGGTGCCATCGT +
Preference number: 3 (lower is better)
Translates to: TVCRVHKALQVR*PRPRHLVRCHR
Trigger: ACGATGGCACCTGACCAGGTGACGTGGGCGTGGTCACCTCACCTGCAAGGCTTTGTGGACTCTGCACACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 72 bp GTCATACGGTGTGCAGAGTCCACAAAGCCTTGCAGGTaGGGTGACCACGCCCACGTCACCTGGTCAGGTGCC +
Preference number: 3 (lower is better)
Translates to: VIRCAESTKPCR*GDHAHVTWSGA
Trigger: GGCACCTGACCAGGTGACGTGGGCGTGGTCACCTCACCTGCAAGGCTTTGTGGACTCTGCACACCGTATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CAA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGATGCAGATCCACGTGTaGTTGGAGGAGGCGCTCCCT +
Preference number: 3 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKMQIHV*LEEALP
Trigger: AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCAT...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
3UTR CCA 72 bp ACACACGCACACACATGGACCGAACCAAACACGCCGTaGAAGCTGAGCCACACACACCCCGGTCTCAAGAAG +
Preference number: 3 (lower is better)
Translates to: THAHTWTEPNTP*KLSHTHPGLKK
Trigger: CTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
3UTR CCA 72 bp CTGACCCACTGCTCATCGCGAGGGCCTGCCAGGAGCTaGCCTCCCGCACTACTTGTGAGTAAAGTGAATATC +
Preference number: 3 (lower is better)
Translates to: LTHCSSRGPARS*PPALLVSKVNI
Trigger: GATATTCACTTTACTCACAAGTAGTGCGGGAGGCCAGCTCCTGGCAGGCCCTCGCGATGAGCAGTGGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CAA 90 bp AGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCTCATCCTTAAACCCTTaGTTTTTCAGCAGTTTGCCC +
Preference number: 3 (lower is better)
Translates to: SQTPASHTAADPLLIARASSLNP*FFSSLP
Trigger: GGGCAAACTGCTGAAAAACAAAGGGTTTAAGGATGA...GGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR GCA 72 bp CAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTaGAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAG +
Preference number: 3 (lower is better)
Translates to: QIYTHEEKVRAH*RQRGSGKNFTE
Trigger: CTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CAA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCTTCCTGCTATCATGTTaGAGGGCCCCCTTGTACGGA +
Preference number: 3 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSFLLSC*RAPLYG
Trigger: TCCGTACAAGGGGGCCCTCAAACATGATAGCAGGAA...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
3UTR-3UTR CAA 90 bp TTACAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGGCCTGCATGTAGGGAAGTaGGAAGACACAAACCCCACC +
Preference number: 3 (lower is better)
Translates to: LQIYTHEEKVRAHCRQRGLHVGK*EDTNPT
Trigger: GGTGGGGTTTGTGTCTTCCAACTTCCCTACATGCAG...GCCGCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 72 bp CTTTCCTCCACTTTTCAAAGGCCTGCAGCCACTCTGTaGCTACAAGAGCCAGTCCTCCGACCTTTTCACCCA +
Preference number: 3 (lower is better)
Translates to: LSSTFQRPAATL*LQEPVLRPFHP
Trigger: TGGGTGAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAGTGGCTGCAGGCCTTTGAAAAGTGGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CAA 90 bp CCTCCACCGAGCCGGTCAGCTGTGGGTGGTTTTCCTGTTACGACGCTCAGTAGCCCAACAACATGGTTTTaGCAAATAAACCATCCCTTC +
Preference number: 3 (lower is better)
Translates to: PPPSRSAVGGFPVTTLSSPTTWF*QINHPF
Trigger: GAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGG...GCTACTGAGCGTCGTAACAGGAAAACCACCCACAGCTGACCGGCTCGGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CAA 90 bp ACGCCCTTGTTCACTGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACCGAGCCTCATCCTTAAACCCTTaGTTTTTCAGCAGTTTGCCC +
Preference number: 3 (lower is better)
Translates to: TPLFTDKETCPRSVLHRASSLNP*FFSSLP
Trigger: GGGCAAACTGCTGAAAAACAAAGGGTTTAAGGATGA...GGCTCGGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 72 bp GACAGATGTTCCACGCGTAGTTCCTGCTATCATGTTTaGGGGCCCCCTTGTACGGATACCAAGCAAGTACAA +
Preference number: 3 (lower is better)
Translates to: DRCSTRSSCYHV*GPPCTDTKQVQ
Trigger: TTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
3UTR CCA 72 bp TCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTaGAAGCCCAGTACAGTGGGAGTGAAATGTGTGCGG +
Preference number: 3 (lower is better)
Translates to: SYRKYRGLNAKA*KPSTVGVKCVR
Trigger: CCGCACACATTTCACTCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CAA 90 bp CCATATCACAGATTGTCTGTCAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGATGCAGATCCACGTGTaGTTGGAGGAGGCGCTCCCT +
Preference number: 3 (lower is better)
Translates to: PYHRLSVSNLLFSQESSKMQIHV*LEEALP
Trigger: AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCAT...CTTTGAACTCTCTTGGCTGAACAGCAGATTACTGACAGACAATCTGTGATATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CAA 90 bp TTACAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGGCACACCATATCACAGATaGTCTGTCAGTAATCTGCTG +
Preference number: 3 (lower is better)
Translates to: LQIYTHEEKVRAHCRQRGTPYHR*SVSNLL
Trigger: CAGCAGATTACTGACAGACAATCTGTGATATGGTGT...GCCGCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR-3UTR CAA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCCAACAACATGGTTTTaGCAAATAAACCATCCCTTC +
Preference number: 3 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSPTTWF*QINHPF
Trigger: GAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGG...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
3UTR TCA 72 bp AACAAACTGCAGTGTTCAGAGAAGATAAAATGCCCGTaGTTGGTAGAGTCTGCAGTCCAGTTGCAAGCACCT +
Preference number: 3 (lower is better)
Translates to: NKLQCSEKIKCP*LVESAVQLQAP
Trigger: AGGTGCTTGCAACTGGACTGCAGACTCTACCAATCACGGGCATTTTATCTTCTCTGAACACTGCAGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR TCA 72 bp GTGATTGGTAGAGTCTGCAGTCCAGTTGCAAGCACCTaGAATCTAGAGAGAGAAAGACCTATAACCTGTATG +
Preference number: 3 (lower is better)
Translates to: VIGRVCSPVAST*NLERERPITCM
Trigger: CATACAGGTTATAGGTCTTTCTCTCTCTAGATTTCAGGTGCTTGCAACTGGACTGCAGACTCTACCAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
3UTR CCA 72 bp AATAACAGTATAAAGTCAGAGGAATGTATACTGCCTTaGCCCCAGCGTACGAGGAAGCGTATAAAACACCAT +
Preference number: 3 (lower is better)
Translates to: NNSIKSEECILP*PQRTRKRIKHH
Trigger: ATGGTGTTTTATACGCTTCCTCGTACGCTGGGGCCAAGGCAGTATACATTCCTCTGACTTTATACTGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp AGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCGCTGCTCGGCGCCACTaGGCTCAGAACGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: SQTPASHTAADPLLIARAAARRH*AQNGRG
Trigger: GCCGCGGCCGTTCTGAGCGCAGTGGCGCCGAGCAGC...GGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR GCA 90 bp AGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCAAGGTCAGAGCGCACTaGAGGCAGCGCGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SQTPASHTAADPLLIARAKVRAH*RQRGSG
Trigger: CCCAGAGCCGCGCTGCCTGCAGTGCGCTCTGACCTT...GGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp GGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACCGGGGTCACAGGTGGTaGCAGCGCTCGGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GVLAPSGQQTCIRGFFGNRGHRW*QRSVAS
Trigger: GGAGGCCACCGAGCGCTGCCACCACCTGTGACCCCG...GTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGAGCGCTGTGGAGTCCTaGCCCCGTCGGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGSAVES*PRRGSR
Trigger: TCTGCTGCCCCGACGGGGCCAGGACTCCACAGCGCT...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp ACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCCTCTTGCTGGGGCTaGTTGGGGGAGGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: THMDRTKHAVEAEPHTPRSSCWG*LGEGRC
Trigger: GCACCGGCCCTCCCCCAATCAGCCCCAGCAAGAGGA...CCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGACACGCCGTGGAAGCTaGGCCACACACACCCCGGTC +
Preference number: 4 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGTRRGS*ATHTPV
Trigger: GACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGT...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGCAGGTGCCATCGTCGTaGGCCTCTGGTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGQVPSS*ASGGPG
Trigger: ACCTGGCCCACCAGAGGCTCACGACGATGGCACCTG...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp GTGGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAGGCAGTGCGAGAGGTTaGAGTTGCGGGCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: VESWPRRGSRPASEVSLVGSARG*SCGRQP
Trigger: CGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCC...TACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp AGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCAGGCGGACTCAGGGCTaGTGGATGCTCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SQTPASHTAADPLLIARARRTQG*WMLRPW
Trigger: CCAAGGACGGAGCATCCAGCAGCCCTGAGTCCGCCT...GGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp GGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACCGTGCAGGCTCATGGTaGGGGCCACAGCGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: GVLAPSGQQTCIRGFFGNRAGSW*GPQRAR
Trigger: TCGAGCGCGCTGTGGCCCCCACCATGAGCCTGCACG...GTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
3UTR CAA 72 bp CCGCCAGCACCGCCGACCCCTCCCAGAGTGACGCCCTaGTTCACTGACAAAGAGACCTGTCCCAGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: PPAPPTPPRVTP*FTDKETCPRSV
Trigger: GACACTCCTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGTCACTCTGGGAGGGGTCGGCGGTGCTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp AGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCCGTCCTTGGCCGCTTTaGTCTGGAGCCACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SQTPASHTAADPLLIARARPWPL*SGATCH
Trigger: GTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACG...GGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp GTGGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTACAGGTGCCATCGTCGTaGGCCTCTGGTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VESWPRRGSRPASEVSLVQVPSS*ASGGPG
Trigger: ACCTGGCCCACCAGAGGCTCACGACGATGGCACCTG...TACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCGCTGCTCGGCGCCACTaGGCTCAGAACGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPAARRH*AQNGRG
Trigger: GCCGCGGCCGTTCTGAGCGCAGTGGCGCCGAGCAGC...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR GCA 90 bp ACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGGCTCCCGGGGGTCTCTaGGGCAGTCTCCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: THMDRTKHAVEAEPHTPRAPGGL*GSLHWQ
Trigger: CTGCCAATGGAGACTGCCGCAGAGACCCCCGGGAGC...CCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCTGGCGGGCTGGCCCCTaGGAGAGGCGGACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSWRAGP*ERRTQG
Trigger: GCCCTGAGTCCGCCTCTCGCAGGGGCCAGCCCGCCA...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CCTCCACCGAGCCGGTCAGCTGTGGGTGGTTTTCCTGTTACGACGCTCAGTAGCCCTCTCACAGCCCGCTaGAAGCCGGCAGCGCTGACA +
Preference number: 4 (lower is better)
Translates to: PPPSRSAVGGFPVTTLSSPLTAR*KPAALT
Trigger: TGTCAGCGCTGCCGGCTTGCAGCGGGCTGTGAGAGG...GCTACTGAGCGTCGTAACAGGAAAACCACCCACAGCTGACCGGCTCGGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS-3UTR CCA 90 bp CCTCCACCGAGCCGGTCAGCTGTGGGTGGTTTTCCTGTTACGACGCTCAGTAGCGGGCCTGCCAGGAGCTaGCCTCCCGCACTACTTGTG +
Preference number: 4 (lower is better)
Translates to: PPPSRSAVGGFPVTTLSSGPARS*PPALLV
Trigger: CACAAGTAGTGCGGGAGGCCAGCTCCTGGCAGGCCC...GCTACTGAGCGTCGTAACAGGAAAACCACCCACAGCTGACCGGCTCGGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp GCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGGCCTGCCAGGAGCTaGCCTCCCGCACTACTTGTG +
Preference number: 4 (lower is better)
Translates to: AHTWTEPNTPWKLSHTHPGPARS*PPALLV
Trigger: CACAAGTAGTGCGGGAGGCCAGCTCCTGGCAGGCCC...GGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCCGGTGCGGTGACTGCTaGGGGCAGAGGCCACCGGCA +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPRCGDC*GQRPPA
Trigger: TGCCGGTGGCCTCTGCCCTCAGCAGTCACCGCACCG...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR TCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGCACCTGGCTCCATGCTaGACTTCCTCTTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGHLAPC*TSSCWG
Trigger: GCCCCAGCAAGAGGAAGTTCAGCATGGAGCCAGGTG...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGGCTGCGGGAGGGGCTaGTCGGCGCCACTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAGCGRG*SAPLRS
Trigger: TGAGCGCAGTGGCGCCGAGCAGCCCCTCCCGCAGCC...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR GCA 90 bp GTGGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAGCTGTTCTTGGTCAGTaGGAGGGGCTGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VESWPRRGSRPASEVSLVAVLGQ*EGLLQA
Trigger: GGCCTGGAGCAGCCCCTCGCACTGACCAAGAACAGC...TACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTGAGGGCCGGTTCTGCTaGCGCTCCCCCGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPEGRFC*RSPGVS
Trigger: ACTGACCCCGGGGGAGCGGCAGCAGAACCGGCCCTC...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGAGGGCCGGTTCTGCTaGCGCTCCCCCGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: HAVEAEPHTPRSQEAKEKEGRFC*RSPGVS
Trigger: ACTGACCCCGGGGGAGCGGCAGCAGAACCGGCCCTC...TTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp GCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCAGGCGGACTCAGGGCTaGTGGATGCTCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AHTWTEPNTPWKLSHTHPRRTQG*WMLRPW
Trigger: CCAAGGACGGAGCATCCAGCAGCCCTGAGTCCGCCT...GGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp ACAGATGTTCCACGCGTAGTTCCTGCTATCATGTTTGAGGGCCCCCTTGTACGGTGGCGGGCTGGCCCCTaGGAGAGGCGGACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TDVPRVVPAIMFEGPLVRWRAGP*ERRTQG
Trigger: GCCCTGAGTCCGCCTCTCGCAGGGGCCAGCCCGCCA...CCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCTGGCGGGCTGGCCCCTaGGAGAGGCGGACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALWRAGP*ERRTQG
Trigger: GCCCTGAGTCCGCCTCTCGCAGGGGCCAGCCCGCCA...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTCATCGCGAGGGCCTaGCAGGAGCTGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSLIARA*QELASR
Trigger: GCGGGAGGCCAGCTCCTGGCAGGCCCTCGCGATGAG...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp ACAGATGTTCCACGCGTAGTTCCTGCTATCATGTTTGAGGGCCCCCTTGTACGGCCACAGCGCGCTCGATaGGGCTGCGGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: TDVPRVVPAIMFEGPLVRPQRAR*GCGSAP
Trigger: GGGAGCGGAGCCGCAGCCCCATCGAGCGCGCTGTGG...CCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGGGCGAGAGGCCGGCTaGCCTGCTGGCGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAGREAG*PAGVQA
Trigger: AGCCTGGACGCCAGCAGGCCAGCCGGCCTCTCGCCC...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCGGGCGAGAGGCCGGCTaGCCTGCTGGCGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALGREAG*PAGVQA
Trigger: AGCCTGGACGCCAGCAGGCCAGCCGGCCTCTCGCCC...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GTGGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTACAGGCAGCGCGGCTCTaGGAAGAACTTCACGGAGCC +
Preference number: 4 (lower is better)
Translates to: VESWPRRGSRPASEVSLVQAARL*EELHGA
Trigger: GGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTG...TACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp CCTCCACCGAGCCGGTCAGCTGTGGGTGGTTTTCCTGTTACGACGCTCAGTAGCCAGGCAGCGCGGCTCTaGGAAGAACTTCACGGAGCC +
Preference number: 4 (lower is better)
Translates to: PPPSRSAVGGFPVTTLSSQAARL*EELHGA
Trigger: GGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTG...GCTACTGAGCGTCGTAACAGGAAAACCACCCACAGCTGACCGGCTCGGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGCAGCCGAGGCACAGGTaGTCACGGAGGGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKQPRHR*SRRAGS
Trigger: AGAACCGGCCCTCCGTGATCACCTGTGCCTCGGCTG...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp GGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACACAAAGCCTTGCAGGTaGGGTGACCACGCCCACGTC +
Preference number: 4 (lower is better)
Translates to: GVLAPSGQQTCIRGFFGNTKPCR*GDHAHV
Trigger: GACGTGGGCGTGGTCACCTCACCTGCAAGGCTTTGT...GTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp GTGGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTACGACCCCTCCCAGAGTaGCGCCCTTGTTCACTGACA +
Preference number: 4 (lower is better)
Translates to: VESWPRRGSRPASEVSLVRPLPE*RPCSLT
Trigger: TGTCAGTGAACAAGGGCGTCACTCTGGGAGGGGTCG...TACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCGCCTATCAGAGCCGCTaGGGCTGCACGGCACCCGGC +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALAYQSR*GCTAPG
Trigger: GCCGGGTGCCGTGCAGCCTCAGCGGCTCTGATAGGC...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR TCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCCGCTCGCCCGGATaGATCACCTCCCGGCCACTG +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGAPRSPG*ITSRPL
Trigger: CAGTGGCCGGGAGGTGATTCATCCGGGCGAGCGGGG...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR GCA 90 bp CGAGGGCCTGCCAGGAGCTGGCCTCCCGCACTACTTGTGAGTAAAGTGAATATCGCTCCCGGGGGTCTCTaGGGCAGTCTCCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: RGPARSWPPALLVSKVNIAPGGL*GSLHWQ
Trigger: CTGCCAATGGAGACTGCCGCAGAGACCCCCGGGAGC...GATATTCACTTTACTCACAAGTAGTGCGGGAGGCCAGCTCCTGGCAGGCCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp GGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACAGGTGTACAGGTGGCTaGCGTGCAGGCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: GVLAPSGQQTCIRGFFGNRCTGG*RAGSWW
Trigger: CCACCATGAGCCTGCACGGCAGCCACCTGTACACCT...GTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCGAGGGCCGGTTCTGCTaGCGCTCCCCCGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRREGRFC*RSPGVS
Trigger: ACTGACCCCGGGGGAGCGGCAGCAGAACCGGCCCTC...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCGAGGGCCGGTTCTGCTaGCGCTCCCCCGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALEGRFC*RSPGVS
Trigger: ACTGACCCCGGGGGAGCGGCAGCAGAACCGGCCCTC...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAACCGCAGCTGACCCACTaGTCATCGCGAGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: HAVEAEPHTPRSQEAKEKPQLTH*SSRGPA
Trigger: GGCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGG...TTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCCACAGCGCGCTCGATaGGGCTGCGGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRPQRAR*GCGSAP
Trigger: GGGAGCGGAGCCGCAGCCCCATCGAGCGCGCTGTGG...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACGTGCAGGCTCATGGTaGGGGCCACAGCGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: AVEAEPHTPRSQEAKEKARAGSW*GPQRAR
Trigger: TCGAGCGCGCTGTGGCCCCCACCATGAGCCTGCACG...TGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp GCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCATGCCGTGCAGGCTCATaGTGGGGGCCACAGCGCGCT +
Preference number: 4 (lower is better)
Translates to: AVEAEPHTPRSQEAKEKACRAGS*WGPQRA
Trigger: AGCGCGCTGTGGCCCCCACCATGAGCCTGCACGGCA...TGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp CGAGGGCCTGCCAGGAGCTGGCCTCCCGCACTACTTGTGAGTAAAGTGAATATCAGCCGCTGTGCGCGATaGGGCAGTGCGAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RGPARSWPPALLVSKVNISRCAR*GSARGC
Trigger: GCAACCTCTCGCACTGCCCCATCGCGCACAGCGGCT...GATATTCACTTTACTCACAAGTAGTGCGGGAGGCCAGCTCCTGGCAGGCCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCGGGGTCACAGGTGGTaGCAGCGCTCGGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALRGHRW*QRSVAS
Trigger: GGAGGCCACCGAGCGCTGCCACCACCTGTGACCCCG...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCGGGGTCACAGGTGGTaGCAGCGCTCGGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGARGHRW*QRSVAS
Trigger: GGAGGCCACCGAGCGCTGCCACCACCTGTGACCCCG...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCCGGGGTCACAGGTGGTaGCAGCGCTCGGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRRGHRW*QRSVAS
Trigger: GGAGGCCACCGAGCGCTGCCACCACCTGTGACCCCG...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGCGGACTCAGGGCTGCTaGATGCTCCGTCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKRTQGC*MLRPWP
Trigger: CGGCCAAGGACGGAGCATCCAGCAGCCCTGAGTCCG...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCAGCGCTGTGGAGTCCTaGCCCCGTCGGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPSAVES*PRRGSR
Trigger: TCTGCTGCCCCGACGGGGCCAGGACTCCACAGCGCT...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCTCCTCTTGCTGGGGCTaGTTGGGGGAGGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSSSCWG*LGEGRC
Trigger: GCACCGGCCCTCCCCCAATCAGCCCCAGCAAGAGGA...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp ACAGATGTTCCACGCGTAGTTCCTGCTATCATGTTTGAGGGCCCCCTTGTACGGTCCTCTTGCTGGGGCTaGTTGGGGGAGGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: TDVPRVVPAIMFEGPLVRSSCWG*LGEGRC
Trigger: GCACCGGCCCTCCCCCAATCAGCCCCAGCAAGAGGA...CCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCCAGCCGAGGCACAGGTaGTCACGGAGGGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPQPRHR*SRRAGS
Trigger: AGAACCGGCCCTCCGTGATCACCTGTGCCTCGGCTG...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCAGCCGAGGCACAGGTaGTCACGGAGGGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSQPRHR*SRRAGS
Trigger: AGAACCGGCCCTCCGTGATCACCTGTGCCTCGGCTG...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTCAGCCGAGGCACAGGTaGTCACGGAGGGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPQPRHR*SRRAGS
Trigger: AGAACCGGCCCTCCGTGATCACCTGTGCCTCGGCTG...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp GCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACGTCCACGGAGCCCGTaGTGGACACGGAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: AVEAEPHTPRSQEAKEKARPRSP*WTRSWV
Trigger: CACCCAACTCCGTGTCCATCACGGGCTCCGTGGACG...TGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTCGTCCACGGAGCCCGTaGTGGACACGGAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPRPRSP*WTRSWV
Trigger: CACCCAACTCCGTGTCCATCACGGGCTCCGTGGACG...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp CACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGGGAGTGACTGTGGCTaGCCATGTGGGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: HAVEAEPHTPRSQEAKEKGSDCG*PCGQRG
Trigger: GCCCCTCTGCCCACATGGTCAGCCACAGTCACTCCC...TTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCGGGAGTGACTGTGGCTaGCCATGTGGGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSGSDCG*PCGQRG
Trigger: GCCCCTCTGCCCACATGGTCAGCCACAGTCACTCCC...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTGGGAGTGACTGTGGCTaGCCATGTGGGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPGSDCG*PCGQRG
Trigger: GCCCCTCTGCCCACATGGTCAGCCACAGTCACTCCC...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp GCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCAACACGCCGTGGAAGCTaGGCCACACACACCCCGGTC +
Preference number: 4 (lower is better)
Translates to: AVEAEPHTPRSQEAKEKATRRGS*ATHTPV
Trigger: GACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGT...TGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp CAGCCACTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTCACCCAGTGCCAAGCCTTGCAGGTGAGGTaGCCACGCCCACGTCACCTG +
Preference number: 4 (lower is better)
Translates to: QPLCDYKSQSSDLFTQCQALQVR*PRPRHL
Trigger: CAGGTGACGTGGGCGTGGTCACCTCACCTGCAAGGC...TTGGCACTGGGTGAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp GTGGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTATTCTGGGTTCTCCCCTaGGAGCAGCTTCGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: VESWPRRGSRPASEVSLVFWVLP*EQLRPR
Trigger: TCTTGGGCGAAGCTGCTCTCAGGGGAGAACCCAGAA...TACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413604.5
CDS-3UTR GCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGTCAGTGCGAGGGGCTaGTCCAGGCCAAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAVSARG*SRPRLG
Trigger: CCCCAGCCTTGGCCTGGAGCAGCCCCTCGCACTGAC...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCAGAGGCCGGCTGGCCTaGTGGCGTCCAGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPRGRLA*WRPGCS
Trigger: AGAACAGCCTGGACGCCAGCAGGCCAGCCGGCCTCT...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTAGAGGCCGGCTGGCCTaGTGGCGTCCAGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPRGRLA*WRPGCS
Trigger: AGAACAGCCTGGACGCCAGCAGGCCAGCCGGCCTCT...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGCGAGAGGTTGCAGTTaGGGGCGCCAGCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAARGCS*GRQPRH
Trigger: GTGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGC...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCGCGAGAGGTTGCAGTTaGGGGCGCCAGCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALARGCS*GRQPRH
Trigger: GTGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGC...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCGGCAGTGCGAGAGGTTaGAGTTGCGGGCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRGSARG*SCGRQP
Trigger: CGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCC...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTGGCAGTGCGAGAGGTTaGAGTTGCGGGCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGAGSARG*SCGRQP
Trigger: CGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCC...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCGCAGCTGACCCACTaGTCATCGCGAGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGAPQLTH*SSRGPA
Trigger: GGCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGG...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp CGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACTGAGGCAGGAAGTAAGCTTGCTGGGGCTGATTaGGGGAGGGCCGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: RGSRPASEVSLVTEAGSKLAGAD*GRAGAV
Trigger: CACCGCACCGGCCCTCCCCCAATCAGCCCCAGCAAG...CTTACTTCCTGCCTCAGTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCTTGCTGGGGCTGATTaGGGGAGGGCCGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGALAGAD*GRAGAV
Trigger: CACCGCACCGGCCCTCCCCCAATCAGCCCCAGCAAG...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGCCACAGCGCGCTCGATaGGGCTGCGGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRPQRAR*GCGSAP
Trigger: GGGAGCGGAGCCGCAGCCCCATCGAGCGCGCTGTGG...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCGTGCAGGCTCATGGTaGGGGCCACAGCGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEARAGSW*GPQRAR
Trigger: TCGAGCGCGCTGTGGCCCCCACCATGAGCCTGCACG...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACAGATGTTCCACGCGTAGTTCCTGCTATCATGTTTGAGGGCCCCCTTGTACGGTGCCGTGCAGGCTCATaGTGGGGGCCACAGCGCGCT +
Preference number: 4 (lower is better)
Translates to: TDVPRVVPAIMFEGPLVRCRAGS*WGPQRA
Trigger: AGCGCGCTGTGGCCCCCACCATGAGCCTGCACGGCA...CCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCTGCCGTGCAGGCTCATaGTGGGGGCCACAGCGCGCT +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALCRAGS*WGPQRA
Trigger: AGCGCGCTGTGGCCCCCACCATGAGCCTGCACGGCA...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCGGCCGGCTGGCCTGCTaGCGTCCAGGCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRGRLAC*RPGCSW
Trigger: CCAAGAACAGCCTGGACGCCAGCAGGCCAGCCGGCC...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGGCCGGCTGGCCTGCTaGCGTCCAGGCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAGRLAC*RPGCSW
Trigger: CCAAGAACAGCCTGGACGCCAGCAGGCCAGCCGGCC...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGGGCGAGAGGCCGGCTaGCCTGCTGGCGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEEGREAG*PAGVQA
Trigger: AGCCTGGACGCCAGCAGGCCAGCCGGCCTCTCGCCC...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCAGCCGCTGTGCGCGATaGGGCAGTGCGAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPSRCAR*GSARGC
Trigger: GCAACCTCTCGCACTGCCCCATCGCGCACAGCGGCT...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGTTGGCCGCTTTGATCTaGAGCCACGTGTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGLAALI*SHVSPR
Trigger: TCTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAA...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCCGGACTCAGGGCTGCTaGATGCTCCGTCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPRTQGC*MLRPWP
Trigger: CGGCCAAGGACGGAGCATCCAGCAGCCCTGAGTCCG...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCGGACTCAGGGCTGCTaGATGCTCCGTCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSRTQGC*MLRPWP
Trigger: CGGCCAAGGACGGAGCATCCAGCAGCCCTGAGTCCG...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGCACCTGGCTCCATGCTaGACTTCCTCTTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKHLAPC*TSSCWG
Trigger: GCCCCAGCAAGAGGAAGTTCAGCATGGAGCCAGGTG...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp TTACAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGGCGGGAGTGACTGTGGCTaGCCATGTGGGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQIYTHEEKVRAHCRQRGGSDCG*PCGQRG
Trigger: GCCCCTCTGCCCACATGGTCAGCCACAGTCACTCCC...GCCGCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCGGGAGTGACTGTGGCTaGCCATGTGGGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRGSDCG*PCGQRG
Trigger: GCCCCTCTGCCCACATGGTCAGCCACAGTCACTCCC...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGGGAGTGACTGTGGCTaGCCATGTGGGCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAGSDCG*PCGQRG
Trigger: GCCCCTCTGCCCACATGGTCAGCCACAGTCACTCCC...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCGCCTTGCAGGTGAGGTaGCCACGCCCACGTCACCTG +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRALQVR*PRPRHL
Trigger: CAGGTGACGTGGGCGTGGTCACCTCACCTGCAAGGC...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp GACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAACCTGCAGCCACTCTGTaGCTACAAGAGCCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: DRTKHAVEAEPHTPRSQEPAATL*LQEPVL
Trigger: GAGGACTGGCTCTTGTAGTCACAGAGTGGCTGCAGG...TTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGCTCCCGGGGGTCTCTaGGGCAGTCTCCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAAPGGL*GSLHWQ
Trigger: CTGCCAATGGAGACTGCCGCAGAGACCCCCGGGAGC...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCGCTGTTCTTGGTCAGTaGGAGGGGCTGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSAVLGQ*EGLLQA
Trigger: GGCCTGGAGCAGCCCCTCGCACTGACCAAGAACAGC...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCGCTGTTCTTGGTCAGTaGGAGGGGCTGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPAVLGQ*EGLLQA
Trigger: GGCCTGGAGCAGCCCCTCGCACTGACCAAGAACAGC...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TTACAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGGCAGAGGCCGGCTGGCCTaGTGGCGTCCAGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LQIYTHEEKVRAHCRQRGRGRLA*WRPGCS
Trigger: AGAACAGCCTGGACGCCAGCAGGCCAGCCGGCCTCT...GCCGCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCAGAGGCCGGCTGGCCTaGTGGCGTCCAGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRRGRLA*WRPGCS
Trigger: AGAACAGCCTGGACGCCAGCAGGCCAGCCGGCCTCT...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGAGAGGCCGGCTGGCCTaGTGGCGTCCAGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEARGRLA*WRPGCS
Trigger: AGAACAGCCTGGACGCCAGCAGGCCAGCCGGCCTCT...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTCACCCAGTGCCAATTTCCAGGCAGTGCGAGAGGTTaGAGTTGCGGGCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LCDYKSQSSDLFTQCQFPGSARG*SCGRQP
Trigger: CGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCC...TGGAAATTGGCACTGGGTGAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTGCGCGATGGGGCAGTaGGAGAGGTTGCAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPCAMGQ*ERLQLR
Trigger: CCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCA...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCGGACACGGAGTTGGGTaGCGGCTCGGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSGHGVG*RLGLLV
Trigger: TACAAGGAGCCCGAGCCGGCACCCAACTCCGTGTCC...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAGTGGGATGGCGGGCTGGCCCCTaGGAGAGGCGGACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: YRKYRGLNAKAWKPSTVGWRAGP*ERRTQG
Trigger: GCCCTGAGTCCGCCTCTCGCAGGGGCCAGCCCGCCA...TCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCAGATAGGTCAGTaGACCAGGGACCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRSQIGQ*TRDPAA
Trigger: GGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGA...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCAAGGTCAGAGCGCACTaGAGGCAGCGCGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALKVRAH*RQRGSG
Trigger: CCCAGAGCCGCGCTGCCTGCAGTGCGCTCTGACCTT...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp CCTCCACCGAGCCGGTCAGCTGTGGGTGGTTTTCCTGTTACGACGCTCAGTAGCGTCTCCATTCCTGGTTaGAGCCTGAAGGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: PPPSRSAVGGFPVTTLSSVSIPG*SLKGQV
Trigger: GACCTGTCCCTTCAGGCTCCAACCAGGAATGGAGAC...GCTACTGAGCGTCGTAACAGGAAAACCACCCACAGCTGACCGGCTCGGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR CCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGCCACAGCGCGCTCGATaGGGCTGCGGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLEPQRAR*GCGSAP
Trigger: GGGAGCGGAGCCGCAGCCCCATCGAGCGCGCTGTGG...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCCCACAGCGCGCTCGATaGGGCTGCGGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSPQRAR*GCGSAP
Trigger: GGGAGCGGAGCCGCAGCCCCATCGAGCGCGCTGTGG...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGTGCCGTGCAGGCTCATaGTGGGGGCCACAGCGCGCT +
Preference number: 4 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRCRAGS*WGPQRA
Trigger: AGCGCGCTGTGGCCCCCACCATGAGCCTGCACGGCA...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGCGTCCAGGCTGTTCTTaGTCAGTGCGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKRPGCS*SVRGAA
Trigger: AGCAGCCCCTCGCACTGACCAAGAACAGCCTGGACG...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGGGCCGGCTGGCCTGCTaGCGTCCAGGCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRGRLAC*RPGCSW
Trigger: CCAAGAACAGCCTGGACGCCAGCAGGCCAGCCGGCC...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACTTCACGGAGCCCCTTCTTAGAGCAGGGAGGGGGCTTTCTCAGTGAAATGTTTGGCCGGCTGGCCTGCTaGCGTCCAGGCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TSRSPFLEQGGGFLSEMFGRLAC*RPGCSW
Trigger: CCAAGAACAGCCTGGACGCCAGCAGGCCAGCCGGCC...AAACATTTCACTGAGAAAGCCCCCTCCCTGCTCTAAGAAGGGGCTCCGTGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCGGGCGAGAGGCCGGCTaGCCTGCTGGCGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSGREAG*PAGVQA
Trigger: AGCCTGGACGCCAGCAGGCCAGCCGGCCTCTCGCCC...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCAGCCGCTGTGCGCGATaGGGCAGTGCGAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRSRCAR*GSARGC
Trigger: GCAACCTCTCGCACTGCCCCATCGCGCACAGCGGCT...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GTGGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTATTGGCCGCTTTGATCTaGAGCCACGTGTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: VESWPRRGSRPASEVSLVLAALI*SHVSPR
Trigger: TCTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAA...TACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp GCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCAGATCCACGTGTTGTTaGAGGAGGCGCTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AHTWTEPNTPWKLSHTHPRSTCC*RRRSLQ
Trigger: CTGAAGGGAGCGCCTCCTCCAACAACACGTGGATCT...GGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCGTCGTGAGCCTCTGGTaGGCCAGGTGGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPVVSLW*ARWDTA
Trigger: TGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGAC...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGCGGTGCGGTGACTGCTaGGGGCAGAGGCCACCGGCA +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLERCGDC*GQRPPA
Trigger: TGCCGGTGGCCTCTGCCCTCAGCAGTCACCGCACCG...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR TCA 90 bp CACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAACACCTGGCTCCATGCTaGACTTCCTCTTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HAVEAEPHTPRSQEAKEKHLAPC*TSSCWG
Trigger: GCCCCAGCAAGAGGAAGTTCAGCATGGAGCCAGGTG...TTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTCACCTGGCTCCATGCTaGACTTCCTCTTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPHLAPC*TSSCWG
Trigger: GCCCCAGCAAGAGGAAGTTCAGCATGGAGCCAGGTG...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR TCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCACAAAGCCTTGCAGGTaGGGTGACCACGCCCACGTC +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSTKPCR*GDHAHV
Trigger: GACGTGGGCGTGGTCACCTCACCTGCAAGGCTTTGT...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCCGACCCCTCCCAGAGTaGCGCCCTTGTTCACTGACA +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPRPLPE*RPCSLT
Trigger: TGTCAGTGAACAAGGGCGTCACTCTGGGAGGGGTCG...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGACACCCAAAGGACTCTaGGTGGCTCCGTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEATPKGL*VAPCQA
Trigger: GGCCTGGCACGGAGCCACTCAGAGTCCTTTGGGTGT...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR GCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGGTCAGTGCGAGGGGCTaGTCCAGGCCAAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRVSARG*SRPRLG
Trigger: CCCCAGCCTTGGCCTGGAGCAGCCCCTCGCACTGAC...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCGCTGTTCTTGGTCAGTaGGAGGGGCTGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSAVLGQ*EGLLQA
Trigger: GGCCTGGAGCAGCCCCTCGCACTGACCAAGAACAGC...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGGCCGGTTCTGCTaGCGCTCCCCCGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLEEGRFC*RSPGVS
Trigger: ACTGACCCCGGGGGAGCGGCAGCAGAACCGGCCCTC...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGGGCAGTGCGAGAGGTTaGAGTTGCGGGCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRGSARG*SCGRQP
Trigger: CGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCC...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGTGCGCGATGGGGCAGTaGGAGAGGTTGCAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEACAMGQ*ERLQLR
Trigger: CCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCA...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCAGGCTCCTGCGGAAATaGTCCTCCACCACGGGGTCA +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPRLLRK*SSTTGS
Trigger: TGACCCCGTGGTGGAGGAGCATTTCCGCAGGAGCCT...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCAGGCTCCTGCGGAAATaGTCCTCCACCACGGGGTCA +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSRLLRK*SSTTGS
Trigger: TGACCCCGTGGTGGAGGAGCATTTCCGCAGGAGCCT...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTAGGCTCCTGCGGAAATaGTCCTCCACCACGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPRLLRK*SSTTGS
Trigger: TGACCCCGTGGTGGAGGAGCATTTCCGCAGGAGCCT...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGGCTCCTTGTAATTCTTaGCCAGGCTCCTGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGAPCNS*PGSCGN
Trigger: ATTTCCGCAGGAGCCTGGGCAAGAATTACAAGGAGC...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACAGATGTTCCACGCGTAGTTCCTGCTATCATGTTTGAGGGCCCCCTTGTACGGGGACACGGAGTTGGGTaGCGGCTCGGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: TDVPRVVPAIMFEGPLVRGHGVG*RLGLLV
Trigger: TACAAGGAGCCCGAGCCGGCACCCAACTCCGTGTCC...CCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTGGACACGGAGTTGGGTaGCGGCTCGGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGAGHGVG*RLGLLV
Trigger: TACAAGGAGCCCGAGCCGGCACCCAACTCCGTGTCC...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGGACACGGAGTTGGGTaGCGGCTCGGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAGHGVG*RLGLLV
Trigger: TACAAGGAGCCCGAGCCGGCACCCAACTCCGTGTCC...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCAGGCGGACTCAGGGCTaGTGGATGCTCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRRRTQG*WMLRPW
Trigger: CCAAGGACGGAGCATCCAGCAGCCCTGAGTCCGCCT...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGGGGGTCATACGGTGTaGAGAGTCCACAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: DRTKHAVEAEPHTPRSQEGGHTV*RVHKAL
Trigger: CAAGGCTTTGTGGACTCTGCACACCGTATGACCCCC...TTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGTGTTTGGTTTTCTGCTaGCTCCTCTGCCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKCLVFC*LLCPRP
Trigger: GGGCCTGGGGCAGAGGAGGCAGCAGAAAACCAAACA...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp CGAGGGCCTGCCAGGAGCTGGCCTCCCGCACTACTTGTGAGTAAAGTGAATATCTGTTTGGTTTTCTGCTaGCTCCTCTGCCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RGPARSWPPALLVSKVNICLVFC*LLCPRP
Trigger: GGGCCTGGGGCAGAGGAGGCAGCAGAAAACCAAACA...GATATTCACTTTACTCACAAGTAGTGCGGGAGGCCAGCTCCTGGCAGGCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCTCCTGGTCAGGACTGTaGCCGAGAGAGCCCACGGCA +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALSWSGL*PREPTA
Trigger: TGCCGTGGGCTCTCTCGGGCACAGTCCTGACCAGGA...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR GCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGTCACCTCCCGGCCACTaGTTCCCAGGCGTCATGTGC +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEASPPGH*FPGVMC
Trigger: GCACATGACGCCTGGGAAGCAGTGGCCGGGAGGTGA...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR CCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCGCGCTCCGACGCCGCTaGGTTTCCTCCCATTACAGC +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALALRRR*VSSHYS
Trigger: GCTGTAATGGGAGGAAACCCAGCGGCGTCGGAGCGC...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR CCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGCGTGCAGGCTCATGGTaGGGGCCACAGCGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEERAGSW*GPQRAR
Trigger: TCGAGCGCGCTGTGGCCCCCACCATGAGCCTGCACG...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCGTCCAGGCTGTTCTTaGTCAGTGCGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSRPGCS*SVRGAA
Trigger: AGCAGCCCCTCGCACTGACCAAGAACAGCCTGGACG...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGAGCCGCTGTGCGCGATaGGGCAGTGCGAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRSRCAR*GSARGC
Trigger: GCAACCTCTCGCACTGCCCCATCGCGCACAGCGGCT...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAATGTCACCCAGAGCTTTaGCAAAGTGGTCGTCCACGG +
Preference number: 4 (lower is better)
Translates to: DRTKHAVEAEPHTPRSQECHPEL*QSGRPR
Trigger: CCGTGGACGACCACTTTGCCAAAGCTCTGGGTGACA...TTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGACTCAGGGCTGCTaGATGCTCCGTCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRRTQGC*MLRPWP
Trigger: CGGCCAAGGACGGAGCATCCAGCAGCCCTGAGTCCG...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GTGGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAGAATGTATACTGCCTTaGCCCCAGCGTACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VESWPRRGSRPASEVSLVECILP*PQRTRK
Trigger: CTTCCTCGTACGCTGGGGCCAAGGCAGTATACATTC...TACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCCACGCCCACGTCACCTaGTCAGGTGCCATCGTCGTG +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRHAHVT*SGAIVV
Trigger: CACGACGATGGCACCTGACCAGGTGACGTGGGCGTG...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCAGTCGCCTCCGCTCCTaGTCAGGACTGTGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRSRLRS*SGLCPR
Trigger: TCTCGGGCACAGTCCTGACCAGGAGCGGAGGCGACT...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR TCA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGTGTTCAGATGGGGGTTaGAGATGCGACTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGCSDGG*RCDSFW
Trigger: CCAAAATGAGTCGCATCTTCAACCCCCATCTGAACA...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGCAGCCGAGGCACAGGTaGTCACGGAGGGCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRQPRHR*SRRAGS
Trigger: AGAACCGGCCCTCCGTGATCACCTGTGCCTCGGCTG...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGCGTCCACGGAGCCCGTaGTGGACACGGAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEERPRSP*WTRSWV
Trigger: CACCCAACTCCGTGTCCATCACGGGCTCCGTGGACG...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCCGTCCTTGGCCGCTTTaGTCTGGAGCCACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRRPWPL*SGATCH
Trigger: GTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACG...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCCTGCAGCCACTCTGTaGCTACAAGAGCCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSPAATL*LQEPVL
Trigger: GAGGACTGGCTCTTGTAGTCACAGAGTGGCTGCAGG...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTTTTCGTCATCAGCATaGACCAGAGATGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: THMDRTKHAVEAEPHTPRFSSSA*TRDAAL
Trigger: CAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAA...CCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR GCA 90 bp ACAGATGTTCCACGCGTAGTTCCTGCTATCATGTTTGAGGGCCCCCTTGTACGGAGGTGTACAGGTGGCTaGCGTGCAGGCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: TDVPRVVPAIMFEGPLVRRCTGG*RAGSWW
Trigger: CCACCATGAGCCTGCACGGCAGCCACCTGTACACCT...CCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp TGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTAGGGAAGTTGGCGAGAGGTTGCAGTTaGGGGCGCCAGCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: CCSAKRVQREQFLHVGKLARGCS*GRQPRH
Trigger: GTGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGC...CAACTTCCCTACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCAGGCTCCTGCGGAAATaGTCCTCCACCACGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRRLLRK*SSTTGS
Trigger: TGACCCCGTGGTGGAGGAGCATTTCCGCAGGAGCCT...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp ACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGGTGATTGGTAGAGTCTaGAGTCCAGTTGCAAGCACC +
Preference number: 4 (lower is better)
Translates to: THMDRTKHAVEAEPHTPRVIGRV*SPVAST
Trigger: GGTGCTTGCAACTGGACTGCAGACTCTACCAATCAC...CCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACAGATGTTCCACGCGTAGTTCCTGCTATCATGTTTGAGGGCCCCCTTGTACGGCGTCACCTGGTCAGGTaGCATCGTCGTGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TDVPRVVPAIMFEGPLVRRHLVR*HRREPL
Trigger: CAGAGGCTCACGACGATGGCACCTGACCAGGTGACG...CCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACAAATCCCAGATAGGTCAGTaGACCAGGGACCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: WKLSHTHPGLKKQRKKHKSQIGQ*TRDPAA
Trigger: GGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGA...TTTGTGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp GCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACCCCCTCCAGGGTACTaGCTATCCCAGATAGGTCAG +
Preference number: 4 (lower is better)
Translates to: AVEAEPHTPRSQEAKEKAPPPGY*LSQIGQ
Trigger: CTGACCTATCTGGGATAGGCAGTACCCTGGAGGGGG...TGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp GGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACAAATGTTTGGTTTTCTaGTGCCTCCTCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVLAPSGQQTCIRGFFGNKCLVF*CLLCPR
Trigger: CCTGGGGCAGAGGAGGCAGCAGAAAACCAAACATTT...GTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTTCCCAGGCGTCATGTaGTCCCGGGGACGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRFPGVM*SRGRQK
Trigger: TTTCTGCCGTCCCCGGGAGCACATGACGCCTGGGAA...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR CCA 90 bp GCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGCAGTCTTGTTCAGATaGGGGTTGAAGATGCGACTC +
Preference number: 4 (lower is better)
Translates to: AHTWTEPNTPWKLSHTHPAVLFR*GLKMRL
Trigger: GAGTCGCATCTTCAACCCCCATCTGAACAAGACTGC...GGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGCGTGCAGGCTCATGGTaGGGGCCACAGCGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLERAGSW*GPQRAR
Trigger: TCGAGCGCGCTGTGGCCCCCACCATGAGCCTGCACG...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCGTCCAGGCTGTTCTTaGTCAGTGCGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALRPGCS*SVRGAA
Trigger: AGCAGCCCCTCGCACTGACCAAGAACAGCCTGGACG...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp CGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACTGAGGCAGGAAGTAAGCGTCCAGGCTGTTCTTaGTCAGTGCGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGSRPASEVSLVTEAGSKRPGCS*SVRGAA
Trigger: AGCAGCCCCTCGCACTGACCAAGAACAGCCTGGACG...CTTACTTCCTGCCTCAGTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAGGGCGAGAGGCCGGCTaGCCTGCTGGCGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTEGREAG*PAGVQA
Trigger: AGCCTGGACGCCAGCAGGCCAGCCGGCCTCTCGCCC...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGTCCTTGGCCGCTTTaGTCTGGAGCCACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRRPWPL*SGATCH
Trigger: GTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACG...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGTCCTGCTATCATGTTTaGGGGCCCCCTTGTACGGAT +
Preference number: 4 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKSCYHV*GPPCTD
Trigger: ATCCGTACAAGGGGGCCCTCAAACATGATAGCAGGA...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp ACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGATTCATCATGGCTTGTaGCTGAGAAAGCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: THMDRTKHAVEAEPHTPRIHHGL*LRKRCG
Trigger: TCCACAGCGCTTTCTCAGTCACAAGCCATGATGAAT...CCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp TACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAACACGCCGTGGAAGCTaGGCCACACACACCCCGGTC +
Preference number: 4 (lower is better)
Translates to: YRKYRGLNAKAWKPSTVGTRRGS*ATHTPV
Trigger: GACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGT...TCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp TGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACAAAATCCCACACCGCAGCTaGCCCACTGCTCATCGCGAG +
Preference number: 4 (lower is better)
Translates to: WKLSHTHPGLKKQRKKHKIPHRS*PTAHRE
Trigger: CTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGAT...TTTGTGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp ACAGATGTTCCACGCGTAGTTCCTGCTATCATGTTTGAGGGCCCCCTTGTACGGCCAGTACAGTGGGAGTaGAATGTGTGCGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: TDVPRVVPAIMFEGPLVRPVQWE*NVCGAR
Trigger: CCTTGCCCCGCACACATTTCACTCCCACTGTACTGG...CCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCAGTACAGTGGGAGTaGAATGTGTGCGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALPVQWE*NVCGAR
Trigger: CCTTGCCCCGCACACATTTCACTCCCACTGTACTGG...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCGTTGCACTCCAGCGCTaGACTTCACACTCGCACACG +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALVALQR*TSHSHT
Trigger: CGTGTGCGAGTGTGAAGTGCAGCGCTGGAGTGCAAC...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR GCA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGGGCTGCGGGAGGGGCTaGTCGGCGCCACTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLGCGRG*SAPLRS
Trigger: TGAGCGCAGTGGCGCCGAGCAGCCCCTCCCGCAGCC...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR GCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGCTCCCGGGGGTCTCTaGGGCAGTCTCCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLEAPGGL*GSLHWQ
Trigger: CTGCCAATGGAGACTGCCGCAGAGACCCCCGGGAGC...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCGCTCCCGGGGGTCTCTaGGGCAGTCTCCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSAPGGL*GSLHWQ
Trigger: CTGCCAATGGAGACTGCCGCAGAGACCCCCGGGAGC...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGAGGTGTACAGGTGGCTaGCGTGCAGGCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRRCTGG*RAGSWW
Trigger: CCACCATGAGCCTGCACGGCAGCCACCTGTACACCT...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAGAGGGCCGGTTCTGCTaGCGCTCCCCCGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTEEGRFC*RSPGVS
Trigger: ACTGACCCCGGGGGAGCGGCAGCAGAACCGGCCCTC...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GTCAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTGCGAGAGGTTGCAGTTaGGGGCGCCAGCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VSNLLFSQESSKGAVSACARGCS*GRQPRH
Trigger: GTGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGC...ACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCAGATTACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACAAATGCGCGATGGGGCAGTaGGAGAGGTTGCAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: WKLSHTHPGLKKQRKKHKCAMGQ*ERLQLR
Trigger: CCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCA...TTTGTGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGAGGCGGACTCAGGGCTaGTGGATGCTCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEERRTQG*WMLRPW
Trigger: CCAAGGACGGAGCATCCAGCAGCCCTGAGTCCGCCT...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp ACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGCACTTTTCAAAGGCCTaGAGCCACTCTGTGACTACA +
Preference number: 4 (lower is better)
Translates to: THMDRTKHAVEAEPHTPRHFSKA*SHSVTT
Trigger: TGTAGTCACAGAGTGGCTGCAGGCCTTTGAAAAGTG...CCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp ACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGGGACAAAACATCCAATaGCGTCTCCATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: THMDRTKHAVEAEPHTPRGQNIQ*RLHSWL
Trigger: CAACCAGGAATGGAGACGCCATTGGATGTTTTGTCC...CCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR CCA 90 bp GCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCCTCATTTTGGAGACGTaGTCGTTGTCACAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: AHTWTEPNTPWKLSHTHPLILET*SLSQSR
Trigger: CCTAGACTGTGACAACGACCACGTCTCCAAAATGAG...GGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp CCATATCACAGATTGTCTGTCAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGGGGCGAGAGGCCGGCTaGCCTGCTGGCGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PYHRLSVSNLLFSQESSKGREAG*PAGVQA
Trigger: AGCCTGGACGCCAGCAGGCCAGCCGGCCTCTCGCCC...CTTTGAACTCTCTTGGCTGAACAGCAGATTACTGACAGACAATCTGTGATATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCAGCCGCTGTGCGCGATaGGGCAGTGCGAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSSRCAR*GSARGC
Trigger: GCAACCTCTCGCACTGCCCCATCGCGCACAGCGGCT...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGAGAGCTTTGGCAAAGTaGTCGTCCACGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEARALAK*SSTEPV
Trigger: CACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCT...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCTTGGCCGCTTTGATCTaGAGCCACGTGTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSLAALI*SHVSPR
Trigger: TCTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAA...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGCGGACTCAGGGCTGCTaGATGCTCCGTCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLERTQGC*MLRPWP
Trigger: CGGCCAAGGACGGAGCATCCAGCAGCCCTGAGTCCG...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCAAGATCCACGTGTTGTTaGAGGAGGCGCTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AVEAEPHTPRSQEAKEKARSTCC*RRRSLQ
Trigger: CTGAAGGGAGCGCCTCCTCCAACAACACGTGGATCT...TGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCAGATCCACGTGTTGTTaGAGGAGGCGCTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSRSTCC*RRRSLQ
Trigger: CTGAAGGGAGCGCCTCCTCCAACAACACGTGGATCT...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp CACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGAACCAAACACGCCGTaGAAGCTGAGCCACACACAC +
Preference number: 4 (lower is better)
Translates to: HAVEAEPHTPRSQEAKEKEPNTP*KLSHTH
Trigger: GTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTC...TTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGAAACCCCACCTCCCCTaGGAGCTTGTAACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKKPHLP*ELVTKQ
Trigger: CTGCTTTGTTACAAGCTCCCAGGGGAGGTGGGGTTT...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCCCGGTCAGCTGTGGGTaGTTTTCCTGTTACGACGCT +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPPVSCG*FSCYDA
Trigger: AGCGTCGTAACAGGAAAACCACCCACAGCTGACCGG...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGTTCCTGGTTGGAGCCTaGAGGGACAGGTCACACCGG +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRFLVGA*RDRSHR
Trigger: CCGGTGTGACCTGTCCCTTCAGGCTCCAACCAGGAA...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR TCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGTCCTCTTGCTGGGGCTaGTTGGGGGAGGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLSSCWG*LGEGRC
Trigger: GCACCGGCCCTCCCCCAATCAGCCCCAGCAAGAGGA...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR TCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGCGTCCTTGGCCGCTTTaGTCTGGAGCCACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEERPWPL*SGATCH
Trigger: GTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACG...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCATCATGGCTTGTGACTaGGAAAGCGCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPIMACD*ESAVES
Trigger: GGACTCCACAGCGCTTTCTCAGTCACAAGCCATGAT...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp GACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAATTCATCATGGCTTGTaGCTGAGAAAGCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: DRTKHAVEAEPHTPRSQEIHHGL*LRKRCG
Trigger: TCCACAGCGCTTTCTCAGTCACAAGCCATGATGAAT...TTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp ACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGAAAGCACAAAGCGTCTaGGTCACCAATTCATCATGG +
Preference number: 4 (lower is better)
Translates to: THMDRTKHAVEAEPHTPRKAQSV*VTNSSW
Trigger: CCATGATGAATTGGTGACTCAGACGCTTTGTGCTTT...CCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp GGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACAAGATAAAATGCCCGTaGTTGGTAGAGTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GVLAPSGQQTCIRGFFGNKIKCP*LVESAV
Trigger: GACTGCAGACTCTACCAATCACGGGCATTTTATCTT...GTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCATCCCACACCGCAGCTaGCCCACTGCTCATCGCGAG +
Preference number: 4 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSIPHRS*PTAHRE
Trigger: CTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGAT...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp GCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGATAGAAACGCTCATTaGCCAAAAAGGAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AHTWTEPNTPWKLSHTHPDRNAH*PKRSSC
Trigger: ACAGCTGCTCCTTTTTGGTCAATGAGCGTTTCTATC...GGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTGACGCCCTTGTTCACTaGCAAAGAGACCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGADALVH*QRDLSQ
Trigger: CTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGTC...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGAGGTGTACAGGTGGCTaGCGTGCAGGCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEERCTGG*RAGSWW
Trigger: CCACCATGAGCCTGCACGGCAGCCACCTGTACACCT...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAGTCAGTGCGAGGGGCTaGTCCAGGCCAAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTEVSARG*SRPRLG
Trigger: CCCCAGCCTTGGCCTGGAGCAGCCCCTCGCACTGAC...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TTGTCAGGCAACTTTAGTCCTCCTCCAATAGTGCAAATCAGACACGACAGTTCTGTCAGTGCGAGGGGCTaGTCCAGGCCAAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSGNFSPPPIVQIRHDSSVSARG*SRPRLG
Trigger: CCCCAGCCTTGGCCTGGAGCAGCCCCTCGCACTGAC...AGAACTGTCGTGTCTGATTTGCACTATTGGAGGAGGACTAAAGTTGCCTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGCGAGAGGTTGCAGTTaGGGGCGCCAGCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLARGCS*GRQPRH
Trigger: GTGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGC...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TTGTCAGGCAACTTTAGTCCTCCTCCAATAGTGCAAATCAGACACGACAGTTCTGGCAGTGCGAGAGGTTaGAGTTGCGGGCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LSGNFSPPPIVQIRHDSSGSARG*SCGRQP
Trigger: CGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCC...AGAACTGTCGTGTCTGATTTGCACTATTGGAGGAGGACTAAAGTTGCCTGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGAGGCTCCTGCGGAAATaGTCCTCCACCACGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEERLLRK*SSTTGS
Trigger: TGACCCCGTGGTGGAGGAGCATTTCCGCAGGAGCCT...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCATCGGGGCAGCAGACCTaGATCAGAGGTTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: AVEAEPHTPRSQEAKEKASGQQT*IRGFFG
Trigger: ACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGA...TGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp CAGCCACTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTCACCCAGTGCCAATCGGGGCAGCAGACCTaGATCAGAGGTTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QPLCDYKSQSSDLFTQCQSGQQT*IRGFFG
Trigger: ACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGA...TTGGCACTGGGTGAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAGTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAAACCGCACGCATCCTaGCCGGGAGATGGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRKPHAS*PGDGSR
Trigger: GCGACTTCCATCTCCCGGGCAGGATGCGTGCGGTTT...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR CCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTGGCGTCTCCATTCCTaGTTGGAGCCTGAAGGGACA +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRWRLHS*LEPEGT
Trigger: TGTCCCTTCAGGCTCCAACCAGGAATGGAGACGCCA...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR CCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCCAGAGATGCTGCCCTaGACAAAACATCCAATGGCG +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSPEMLP*TKHPMA
Trigger: CGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGG...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR CCA 90 bp ACGCCCTTGTTCACTGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACCGAGCCAGATGCGACTCATTTTaGAGACGTGGTCGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TPLFTDKETCPRSVLHRARCDSF*RRGRCH
Trigger: GTGACAACGACCACGTCTCCAAAATGAGTCGCATCT...GGCTCGGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGCGTGCAGGCTCATGGTaGGGGCCACAGCGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLRAGSW*GPQRAR
Trigger: TCGAGCGCGCTGTGGCCCCCACCATGAGCCTGCACG...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTGTCACCCAGAGCTTTaGCAAAGTGGTCGTCCACGG +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRCHPEL*QSGRPR
Trigger: CCGTGGACGACCACTTTGCCAAAGCTCTGGGTGACA...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGTGTCACCCAGAGCTTTaGCAAAGTGGTCGTCCACGG +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEACHPEL*QSGRPR
Trigger: CCGTGGACGACCACTTTGCCAAAGCTCTGGGTGACA...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTTTGGCCGCTTTGATCTaGAGCCACGTGTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGALAALI*SHVSPR
Trigger: TCTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAA...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACGTCACCAATTCATCATaGCTTGTGACTGAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: GVLAPSGQQTCIRGFFGNVTNSS*LVTEKA
Trigger: CGCTTTCTCAGTCACAAGCCATGATGAATTGGTGAC...GTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCGAACCAAACACGCCGTaGAAGCTGAGCCACACACAC +
Preference number: 4 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSEPNTP*KLSHTH
Trigger: GTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTC...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp TACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAGTCGTGAGCCTCTGGTaGGCCAGGTGGGACACAGCA +
Preference number: 4 (lower is better)
Translates to: YRKYRGLNAKAWKPSTVGVVSLW*ARWDTA
Trigger: TGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGAC...TCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGCTGAATGCCAAAGCTTaGAAGCCCAGTACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKLNAKA*KPSTVG
Trigger: TCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAG...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp CGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACTGAGGCAGGAAGTAAGCGAGCCGGTCAGCTGTaGGTGGTTTTCCTGTTACGA +
Preference number: 4 (lower is better)
Translates to: RGSRPASEVSLVTEAGSKRAGQL*VVFLLR
Trigger: TCGTAACAGGAAAACCACCCACAGCTGACCGGCTCG...CTTACTTCCTGCCTCAGTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCGAGCCGGTCAGCTGTaGGTGGTTTTCCTGTTACGA +
Preference number: 4 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSRAGQL*VVFLLR
Trigger: TCGTAACAGGAAAACCACCCACAGCTGACCGGCTCG...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGATCCTGCCCGGGAGATaGAAGTCGCCTCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLEILPGR*KSPPLL
Trigger: CAGGAGCGGAGGCGACTTCCATCTCCCGGGCAGGAT...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR TCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGCGTCCACGGAGCCCGTaGTGGACACGGAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLRPRSP*WTRSWV
Trigger: CACCCAACTCCGTGTCCATCACGGGCTCCGTGGACG...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGCGTCCTTGGCCGCTTTaGTCTGGAGCCACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLERPWPL*SGATCH
Trigger: GTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACG...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCTGCTATCATGTTTaGGGGCCCCCTTGTACGGAT +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRSCYHV*GPPCTD
Trigger: ATCCGTACAAGGGGGCCCTCAAACATGATAGCAGGA...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCATCATGGCTTGTGACTaGGAAAGCGCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRIMACD*ESAVES
Trigger: GGACTCCACAGCGCTTTCTCAGTCACAAGCCATGAT...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCAGCATGCACCAGAGATaGTGCCCTGGACAAAACATC +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPSMHQR*CPGQNI
Trigger: GATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCT...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR GCA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTTTTCGTCATCAGCATaGACCAGAGATGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: FKAQANHADPRVVGGGAPFSSSA*TRDAAL
Trigger: CAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAA...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR GCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAGCTCCCGGGGGTCTCTaGGGCAGTCTCCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTEAPGGL*GSLHWQ
Trigger: CTGCCAATGGAGACTGCCGCAGAGACCCCCGGGAGC...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCAGCTCAGGCAAACCATaGAGATCCACGTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSSSGKP*RSTCCW
Trigger: CCAACAACACGTGGATCTGCATGGTTTGCCTGAGCT...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCAGAGGAATGTATACTaGCTTGGCCCCAGCGTACGA +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGAQRNVY*LGPSVR
Trigger: TCGTACGCTGGGGCCAAGGCAGTATACATTCCTCTG...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGCCCCCTCCAGGGTACTaGCTATCCCAGATAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEEPPPGY*LSQIGQ
Trigger: CTGACCTATCTGGGATAGGCAGTACCCTGGAGGGGG...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTAGAACCCATGGCCTCTaGAATCAGACAACGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPRTHGL*NQTTPH
Trigger: ATGAGGCGTTGTCTGATTGCAGAGGCCATGGGTTCT...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413604.5
CDS-3UTR CCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGGGAGGGAGATCGGAGTaGAAAGAGTCCCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRGGRSE*KESPSA
Trigger: GGCTGAAGGGGACTCTTTCCACTCCGATCTCCCTCC...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR CCA 90 bp CCATATCACAGATTGTCTGTCAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGCTTGCTGGGGCTGATTaGGGGAGGGCCGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: PYHRLSVSNLLFSQESSKLAGAD*GRAGAV
Trigger: CACCGCACCGGCCCTCCCCCAATCAGCCCCAGCAAG...CTTTGAACTCTCTTGGCTGAACAGCAGATTACTGACAGACAATCTGTGATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTGCAGTCTTGTTCAGATaGGGGTTGAAGATGCGACTC +
Preference number: 4 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPAVLFR*GLKMRL
Trigger: GAGTCGCATCTTCAACCCCCATCTGAACAAGACTGC...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGTGCGGCAGTCTCCATTaGCAGTCTTGTTCAGATGGG +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEACGSLH*QSCSDG
Trigger: CCCATCTGAACAAGACTGCCAATGGAGACTGCCGCA...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CCA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTGCCGTGCAGGCTCATaGTGGGGGCCACAGCGCGCT +
Preference number: 4 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLCRAGS*WGPQRA
Trigger: AGCGCGCTGTGGCCCCCACCATGAGCCTGCACGGCA...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAAGCCGCTGTGCGCGATaGGGCAGTGCGAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTESRCAR*GSARGC
Trigger: GCAACCTCTCGCACTGCCCCATCGCGCACAGCGGCT...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp AGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTTCCCGGGGTCACAGGTGGTaGCAGCGCTCGGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQIPTTWFLQINHPFPSRGHRW*QRSVAS
Trigger: GGAGGCCACCGAGCGCTGCCACCACCTGTGACCCCG...GGAAGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGAGAGCTTTGGCAAAGTaGTCGTCCACGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEERALAK*SSTEPV
Trigger: CACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCT...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGCGGACTCAGGGCTGCTaGATGCTCCGTCCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLRTQGC*MLRPWP
Trigger: CGGCCAAGGACGGAGCATCCAGCAGCCCTGAGTCCG...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACTTCACGGAGCCCCTTCTTAGAGCAGGGAGGGGGCTTTCTCAGTGAAATGTTTGAACCAAACACGCCGTaGAAGCTGAGCCACACACAC +
Preference number: 4 (lower is better)
Translates to: TSRSPFLEQGGGFLSEMFEPNTP*KLSHTH
Trigger: GTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTC...AAACATTTCACTGAGAAAGCCCCCTCCCTGCTCTAAGAAGGGGCTCCGTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp GGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACACGTTTAAAGCACTATaGAATCCTCCAACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GVLAPSGQQTCIRGFFGNTFKAL*NPPTSA
Trigger: AGCTGAGGTTGGAGGATTCCATAGTGCTTTAAACGT...GTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGCCAAAGGACTCTGAGTaGCTCCGTGCCAGGCCTATC +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRPKDSE*LRARPI
Trigger: GATAGGCCTGGCACGGAGCCACTCAGAGTCCTTTGG...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424529.6
3UTR CAA 72 bp CCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTaGGTAACTGAGGCAGGAAGTAAGGATGCTACATTA +
Preference number: 4 (lower is better)
Translates to: PRRGSRPASEVS*VTEAGSKDATL
Trigger: TAATGTAGCATCCTTACTTCCTGCCTCAGTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGCGTCCACGGAGCCCGTaGTGGACACGGAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLRPRSP*WTRSWV
Trigger: CACCCAACTCCGTGTCCATCACGGGCTCCGTGGACG...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp ACTTCACGGAGCCCCTTCTTAGAGCAGGGAGGGGGCTTTCTCAGTGAAATGTTTATCATGGCTTGTGACTaGGAAAGCGCTGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: TSRSPFLEQGGGFLSEMFIMACD*ESAVES
Trigger: GGACTCCACAGCGCTTTCTCAGTCACAAGCCATGAT...AAACATTTCACTGAGAAAGCCCCCTCCCTGCTCTAAGAAGGGGCTCCGTGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGCCAGTTGCAAGCACCTaGAATCTAGAGAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKPVAST*NLERER
Trigger: TCTTTCTCTCTCTAGATTTCAGGTGCTTGCAACTGG...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGATAGAAACGCTCATTaGCCAAAAAGGAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKDRNAH*PKRSSC
Trigger: ACAGCTGCTCCTTTTTGGTCAATGAGCGTTTCTATC...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp CGAGGGCCTGCCAGGAGCTGGCCTCCCGCACTACTTGTGAGTAAAGTGAATATCACAAACTCGTGGCTATaGATGCAGATGCAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RGPARSWPPALLVSKVNITNSWL*MQMQCS
Trigger: AGAACACTGCATCTGCATTCATAGCCACGAGTTTGT...GATATTCACTTTACTCACAAGTAGTGCGGGAGGCCAGCTCCTGGCAGGCCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGTTGCACTCCAGCGCTaGACTTCACACTCGCACACG +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLEVALQR*TSHSHT
Trigger: CGTGTGCGAGTGTGAAGTGCAGCGCTGGAGTGCAAC...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR GCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGCTGTTCTTGGTCAGTaGGAGGGGCTGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLAVLGQ*EGLLQA
Trigger: GGCCTGGAGCAGCCCCTCGCACTGACCAAGAACAGC...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAATGCGCGATGGGGCAGTaGGAGAGGTTGCAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTECAMGQ*ERLQLR
Trigger: CCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCA...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCGCTCCTTGTAATTCTTaGCCAGGCTCCTGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALAPCNS*PGSCGN
Trigger: ATTTCCGCAGGAGCCTGGGCAAGAATTACAAGGAGC...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGGACACGGAGTTGGGTaGCGGCTCGGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLGHGVG*RLGLLV
Trigger: TACAAGGAGCCCGAGCCGGCACCCAACTCCGTGTCC...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAAGGCGGACTCAGGGCTaGTGGATGCTCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTERRTQG*WMLRPW
Trigger: CCAAGGACGGAGCATCCAGCAGCCCTGAGTCCGCCT...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCAGCTCAGGCAAACCATaGAGATCCACGTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSSSGKP*RSTCCW
Trigger: CCAACAACACGTGGATCTGCATGGTTTGCCTGAGCT...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCAGCTCAGGCAAACCATaGAGATCCACGTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRSSGKP*RSTCCW
Trigger: CCAACAACACGTGGATCTGCATGGTTTGCCTGAGCT...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTAGCTCAGGCAAACCATaGAGATCCACGTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGASSGKP*RSTCCW
Trigger: CCAACAACACGTGGATCTGCATGGTTTGCCTGAGCT...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp GCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACACTTTTCAAAGGCCTaGAGCCACTCTGTGACTACA +
Preference number: 4 (lower is better)
Translates to: AVEAEPHTPRSQEAKEKAHFSKA*SHSVTT
Trigger: TGTAGTCACAGAGTGGCTGCAGGCCTTTGAAAAGTG...TGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp GTGGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTACTTCGTAGCACAGAATaGCGATATTGTTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: VESWPRRGSRPASEVSLVLRSTE*RYCCSS
Trigger: AGATGAACAACAATATCGGCATTCTGTGCTACGAAG...TACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS-3UTR CCA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCGGAGGGAGATCGGAGTaGAAAGAGTCCCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSGGRSE*KESPSA
Trigger: GGCTGAAGGGGACTCTTTCCACTCCGATCTCCCTCC...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR CCA 90 bp CACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAACTCATTTTGGAGACGTaGTCGTTGTCACAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: HAVEAEPHTPRSQEAKEKLILET*SLSQSR
Trigger: CCTAGACTGTGACAACGACCACGTCTCCAAAATGAG...TTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCAGATGCGACTCATTTTaGAGACGTGGTCGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSRCDSF*RRGRCH
Trigger: GTGACAACGACCACGTCTCCAAAATGAGTCGCATCT...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CCA 90 bp AGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTTCCTGCCGTGCAGGCTCATaGTGGGGGCCACAGCGCGCT +
Preference number: 4 (lower is better)
Translates to: RTQIPTTWFLQINHPFPSCRAGS*WGPQRA
Trigger: AGCGCGCTGTGGCCCCCACCATGAGCCTGCACGGCA...GGAAGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GTCAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTCGTCCAGGCTGTTCTTaGTCAGTGCGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSNLLFSQESSKGAVSACRPGCS*SVRGAA
Trigger: AGCAGCCCCTCGCACTGACCAAGAACAGCCTGGACG...ACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCAGATTACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp AGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTTCCGGCCGGCTGGCCTGCTaGCGTCCAGGCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RTQIPTTWFLQINHPFPSGRLAC*RPGCSW
Trigger: CCAAGAACAGCCTGGACGCCAGCAGGCCAGCCGGCC...GGAAGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGAGAGCTTTGGCAAAGTaGTCGTCCACGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLERALAK*SSTEPV
Trigger: CACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCT...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGTTGGCCGCTTTGATCTaGAGCCACGTGTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEELAALI*SHVSPR
Trigger: TCTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAA...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGATCCACGTGTTGTTaGAGGAGGCGCTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRRSTCC*RRRSLQ
Trigger: CTGAAGGGAGCGCCTCCTCCAACAACACGTGGATCT...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp AGCACTATGGAATCCTCCAACCTCAGCTCTAGTCTAACAAACTGCAGTGTTCAGATCGTCGTGAGCCTCTaGTGGGCCAGGTGGGACACA +
Preference number: 4 (lower is better)
Translates to: STMESSNLSSSLTNCSVQIVVSL*WARWDT
Trigger: TGTGTCCCACCTGGCCCACCAGAGGCTCACGACGAT...CTGAACACTGCAGTTTGTTAGACTAGAGCTGAGGTTGGAGGATTCCATAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCTGAATGCCAAAGCTTaGAAGCCCAGTACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSLNAKA*KPSTVG
Trigger: TCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAG...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGGGAGGCAAGAACCCATaGCCTCTGCAATCAGACAAC +
Preference number: 4 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRGGKNP*PLQSDN
Trigger: GTTGTCTGATTGCAGAGGCCATGGGTTCTTGCCTCC...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413604.5
CDS-3UTR CCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCTCCAGCTCATTTTCCTaGTTCCCGGAGCTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALSSSFS*FPELQD
Trigger: GTCTTGAAGCTCCGGGAACCAGGAAAATGAGCTGGA...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR TCA 90 bp CAGCCACTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTCACCCAGTGCCAAAAAGCACAAAGCGTCTaGGTCACCAATTCATCATGG +
Preference number: 4 (lower is better)
Translates to: QPLCDYKSQSSDLFTQCQKAQSV*VTNSSW
Trigger: CCATGATGAATTGGTGACTCAGACGCTTTGTGCTTT...TTGGCACTGGGTGAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp TTACAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGGCGAAAATATAGGGGCCTaGATGCCAAAGCTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LQIYTHEEKVRAHCRQRGENIGA*MPKLGS
Trigger: GCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTC...GCCGCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTGAAAATATAGGGGCCTaGATGCCAAAGCTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGAENIGA*MPKLGS
Trigger: GCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTC...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp CACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAACAGATTTACACACATaGAGAGAAGGTCAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: HAVEAEPHTPRSQEAKEKTDLHT*REGQSA
Trigger: TGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGT...TTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGCATTGCCAAAGAGCATaGAGACAGCCCAGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLEHCQRA*RQPSVL
Trigger: GAGGACGCTGGGCTGTCTTCATGCTCTTTGGCAATG...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451674.6
CDS-3UTR GCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGCCCATTACAGCATGTTaGACTCCAGCGCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEEPITAC*TPALHF
Trigger: GAAGTGCAGCGCTGGAGTGCAACATGCTGTAATGGG...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR GCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCATGCACCAGAGATGCTaGCCTGGACAAAACATCCAA +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALMHQRC*PGQNIQ
Trigger: TTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCAT...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR GCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGAGGTGTACAGGTGGCTaGCGTGCAGGCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLRCTGG*RAGSWW
Trigger: CCACCATGAGCCTGCACGGCAGCCACCTGTACACCT...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGGCTGTTCTTGGTCAGTaGGAGGGGCTGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLAVLGQ*EGLLQA
Trigger: GGCCTGGAGCAGCCCCTCGCACTGACCAAGAACAGC...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTGCGCGATGGGGCAGTaGGAGAGGTTGCAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLCAMGQ*ERLQLR
Trigger: CCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCA...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGAAATGTTTGGTTTTCTaGTGCCTCCTCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRKCLVF*CLLCPR
Trigger: CCTGGGGCAGAGGAGGCAGCAGAAAACCAAACATTT...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGGACAAAACATCCAATaGCGTCTCCATTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAGQNIQ*RLHSWL
Trigger: CAACCAGGAATGGAGACGCCATTGGATGTTTTGTCC...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR CCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCAGATGCGACTCATTTTaGAGACGTGGTCGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRRCDSF*RRGRCH
Trigger: GTGACAACGACCACGTCTCCAAAATGAGTCGCATCT...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGAGATGCGACTCATTTTaGAGACGTGGTCGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEARCDSF*RRGRCH
Trigger: GTGACAACGACCACGTCTCCAAAATGAGTCGCATCT...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CCA 90 bp CACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGTCACCAATTCATCATaGCTTGTGACTGAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: HAVEAEPHTPRSQEAKEKVTNSS*LVTEKA
Trigger: CGCTTTCTCAGTCACAAGCCATGATGAATTGGTGAC...TTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp TGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACAAAAAACCCCACCTCCCCTaGGAGCTTGTAACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: WKLSHTHPGLKKQRKKHKKPHLP*ELVTKQ
Trigger: CTGCTTTGTTACAAGCTCCCAGGGGAGGTGGGGTTT...TTTGTGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp TTGTCAGGCAACTTTAGTCCTCCTCCAATAGTGCAAATCAGACACGACAGTTCTATCGTCGTGAGCCTCTaGTGGGCCAGGTGGGACACA +
Preference number: 4 (lower is better)
Translates to: LSGNFSPPPIVQIRHDSSIVVSL*WARWDT
Trigger: TGTGTCCCACCTGGCCCACCAGAGGCTCACGACGAT...AGAACTGTCGTGTCTGATTTGCACTATTGGAGGAGGACTAAAGTTGCCTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp TGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTAGGGAAGTTGCCGGTCAGCTGTGGGTaGTTTTCCTGTTACGACGCT +
Preference number: 4 (lower is better)
Translates to: CCSAKRVQREQFLHVGKLPVSCG*FSCYDA
Trigger: AGCGTCGTAACAGGAAAACCACCCACAGCTGACCGG...CAACTTCCCTACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCGCCTTTATGCATCTTTaGGGCCCCTCCCTAGATGGC +
Preference number: 4 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSAFMHL*GPSLDG
Trigger: GCCATCTAGGGAGGGGCCCCAAAGATGCATAAAGGC...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413604.5
CDS-3UTR TCA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTAAAGCACAAAGCGTCTaGGTCACCAATTCATCATGG +
Preference number: 4 (lower is better)
Translates to: LFKAQANHADPRVVGGGAKAQSV*VTNSSW
Trigger: CCATGATGAATTGGTGACTCAGACGCTTTGTGCTTT...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR TCA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCACAAACTCGTGGCTATaGATGCAGATGCAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALTNSWL*MQMQCS
Trigger: AGAACACTGCATCTGCATTCATAGCCACGAGTTTGT...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGATCCCCGATCGAGTATaGAAACAGCGTTTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAIPDRV*KQRFRS
Trigger: ACTTCTGAAACGCTGTTTTCATACTCGATCGGGGAT...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS-3UTR GCA 90 bp ACAGATGTTCCACGCGTAGTTCCTGCTATCATGTTTGAGGGCCCCCTTGTACGGTCACACACCAGTGTTTaGTGTGTTTGGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: TDVPRVVPAIMFEGPLVRSHTSV*CVWQTP
Trigger: AGGAGTTTGCCAAACACAGCAAACACTGGTGTGTGA...CCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR GCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCACACACCAGTGTTTaGTGTGTTTGGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRSHTSV*CVWQTP
Trigger: AGGAGTTTGCCAAACACAGCAAACACTGGTGTGTGA...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR GCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGCATGCACCAGAGATaGTGCCCTGGACAAAACATC +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRSMHQR*CPGQNI
Trigger: GATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCT...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR GCA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCAGAGGCCGGCTGGCCTaGTGGCGTCCAGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPRGRLA*WRPGCS
Trigger: AGAACAGCCTGGACGCCAGCAGGCCAGCCGGCCTCT...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCTCCTTGTAATTCTTaGCCAGGCTCCTGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEEAPCNS*PGSCGN
Trigger: ATTTCCGCAGGAGCCTGGGCAAGAATTACAAGGAGC...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp AGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTTCCAGGCGGACTCAGGGCTaGTGGATGCTCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RTQIPTTWFLQINHPFPSRRTQG*WMLRPW
Trigger: CCAAGGACGGAGCATCCAGCAGCCCTGAGTCCGCCT...GGAAGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCTCGGGGCAGCAGACCTaGATCAGAGGTTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSSGQQT*IRGFFG
Trigger: ACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGA...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp CACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAATGTTTTTCAGCAGTTTaGCCTCAGAGTTCTGGCATA +
Preference number: 4 (lower is better)
Translates to: HAVEAEPHTPRSQEAKEKCFSAV*PQSSGI
Trigger: TATGCCAGAACTCTGAGGGCAAACTGCTGAAAAACA...TTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCTGTCTGTCAGTAATCTaGTGTTCAGCCAAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSCLSVI*CSAKRV
Trigger: AACTCTCTTGGCTGAACAGCAGATTACTGACAGACA...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTAGGGAAGTTGCAGAGGAATGTATACTaGCTTGGCCCCAGCGTACGA +
Preference number: 4 (lower is better)
Translates to: CCSAKRVQREQFLHVGKLQRNVY*LGPSVR
Trigger: TCGTACGCTGGGGCCAAGGCAGTATACATTCCTCTG...CAACTTCCCTACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGCGTCACCTGGTCAGGTaGCATCGTCGTGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLRHLVR*HRREPL
Trigger: CAGAGGCTCACGACGATGGCACCTGACCAGGTGACG...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp CACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAACTCGTGGCTATGAATaGAGATGCAGTGTTCTCATA +
Preference number: 4 (lower is better)
Translates to: HAVEAEPHTPRSQEAKEKTRGYE*RCSVLI
Trigger: TATGAGAACACTGCATCTGCATTCATAGCCACGAGT...TTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp AGCACTATGGAATCCTCCAACCTCAGCTCTAGTCTAACAAACTGCAGTGTTCAGTGGCGTCTCCATTCCTaGTTGGAGCCTGAAGGGACA +
Preference number: 4 (lower is better)
Translates to: STMESSNLSSSLTNCSVQWRLHS*LEPEGT
Trigger: TGTCCCTTCAGGCTCCAACCAGGAATGGAGACGCCA...CTGAACACTGCAGTTTGTTAGACTAGAGCTGAGGTTGGAGGATTCCATAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR CCA 90 bp TACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAGTGGGATGCGGCAGTCTCCATTaGCAGTCTTGTTCAGATGGG +
Preference number: 4 (lower is better)
Translates to: YRKYRGLNAKAWKPSTVGCGSLH*QSCSDG
Trigger: CCCATCTGAACAAGACTGCCAATGGAGACTGCCGCA...TCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGAGAGCTTTGGCAAAGTaGTCGTCCACGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLRALAK*SSTEPV
Trigger: CACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCT...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAAGAGCTTTGGCAAAGTaGTCGTCCACGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTERALAK*SSTEPV
Trigger: CACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCT...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp TGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTAGGGAAGTTGGAATGTATACTGCCTTaGCCCCAGCGTACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CCSAKRVQREQFLHVGKLECILP*PQRTRK
Trigger: CTTCCTCGTACGCTGGGGCCAAGGCAGTATACATTC...CAACTTCCCTACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGTGCGGCAGTCTCCATTaGCAGTCTTGTTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEECGSLH*QSCSSL
Trigger: AAGTGAGGAACAAGACTGCCAATGGAGACTGCCGCA...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451674.6
CDS-3UTR TCA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGTGTTCAGATGGGGGTTaGAGATGCGACTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEECSDGG*RCDSFW
Trigger: CCAAAATGAGTCGCATCTTCAACCCCCATCTGAACA...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR TCA 90 bp CAGTGTTCTCATAGAATAACTGTTCCTGCACTTTTACAGACAAATCTACGACAACGTCCACGGAGCCCGTaGTGGACACGGAGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: QCSHRITVPALLQTNLRQRPRSP*WTRSWV
Trigger: CACCCAACTCCGTGTCCATCACGGGCTCCGTGGACG...TTGTCGTAGATTTGTCTGTAAAAGTGCAGGAACAGTTATTCTATGAGAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp AGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTTCCCGTCCTTGGCCGCTTTaGTCTGGAGCCACGTGTCAC +
Preference number: 4 (lower is better)
Translates to: RTQIPTTWFLQINHPFPSRPWPL*SGATCH
Trigger: GTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACG...GGAAGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp ACTTCACGGAGCCCCTTCTTAGAGCAGGGAGGGGGCTTTCTCAGTGAAATGTTTCCAGTTGCAAGCACCTaGAATCTAGAGAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TSRSPFLEQGGGFLSEMFPVAST*NLERER
Trigger: TCTTTCTCTCTCTAGATTTCAGGTGCTTGCAACTGG...AAACATTTCACTGAGAAAGCCCCCTCCCTGCTCTAAGAAGGGGCTCCGTGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGACGCCCTTGTTCACTaGCAAAGAGACCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLDALVH*QRDLSQ
Trigger: CTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGTC...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTCTGGGTTCTCCCCTaGGAGCAGCTTCGCCATGGT +
Preference number: 4 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLFWVLP*EQLRHG
Trigger: ACCATGGCGAAGCTGCTCTCAGGGGAGAACCCAGAA...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426568.5
CDS-3UTR GCA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTGCGCGATGGGGCAGTaGGAGAGGTTGCAGTTGCGG +
Preference number: 4 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPCAMGQ*ERLQLR
Trigger: CCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCA...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp AGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTTCCAGGCTCCTGCGGAAATaGTCCTCCACCACGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RTQIPTTWFLQINHPFPSRLLRK*SSTTGS
Trigger: TGACCCCGTGGTGGAGGAGCATTTCCGCAGGAGCCT...GGAAGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGCTCCTTGTAATTCTTaGCCAGGCTCCTGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLEAPCNS*PGSCGN
Trigger: ATTTCCGCAGGAGCCTGGGCAAGAATTACAAGGAGC...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCGGACACGGAGTTGGGTaGCGGCTCGGGCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPGHGVG*RLGLLV
Trigger: TACAAGGAGCCCGAGCCGGCACCCAACTCCGTGTCC...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTAGGGAAGTTGGTGATTGGTAGAGTCTaGAGTCCAGTTGCAAGCACC +
Preference number: 4 (lower is better)
Translates to: CCSAKRVQREQFLHVGKLVIGRV*SPVAST
Trigger: GGTGCTTGCAACTGGACTGCAGACTCTACCAATCAC...CAACTTCCCTACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCTGTCTGTCAGTAATCTaGTGTTCAGCCAAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSCLSVI*CSAKRV
Trigger: AACTCTCTTGGCTGAACAGCAGATTACTGACAGACA...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCAGTTATGTGCCTTTATaGATCTTTGGGGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSSYVPL*IFGAPP
Trigger: GGGAGGGGCCCCAAAGATGCATAAAGGCACATAACT...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413604.5
CDS-3UTR GCA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCGAGGACTACGATTCTaGATTTCTAACAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEARGLRF*ISNKFP
Trigger: TGGGAACTTGTTAGAAATGCAGAATCGTAGTCCTCG...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426568.5
CDS-3UTR GCA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCTCCAACTTTTGAGTaGACAGGACTCAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRSPTFE*TGLRDF
Trigger: AAAATCCCTGAGTCCTGTGCACTCAAAAGTTGGAGA...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426568.5
CDS-3UTR CCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGAGTGTTTGCTGTGTTTaGCAAACTCCTGGCGTCCAC +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLESVCCV*QTPGVH
Trigger: GTGGACGCCAGGAGTTTGCCAAACACAGCAAACACT...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR CCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGTCTCCATTCCTGGTTaGAGCCTGAAGGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLVSIPG*SLKGQV
Trigger: GACCTGTCCCTTCAGGCTCCAACCAGGAATGGAGAC...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR CCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGCTCATTTTGGAGACGTaGTCGTTGTCACAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRLILET*SLSQSR
Trigger: CCTAGACTGTGACAACGACCACGTCTCCAAAATGAG...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CCA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCGCAGTCTTGTTCAGATaGGGGTTGAAGATGCGACTC +
Preference number: 4 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSAVLFR*GLKMRL
Trigger: GAGTCGCATCTTCAACCCCCATCTGAACAAGACTGC...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGTGTCACCCAGAGCTTTaGCAAAGTGGTCGTCCACGG +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLCHPEL*QSGRPR
Trigger: CCGTGGACGACCACTTTGCCAAAGCTCTGGGTGACA...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAAGATCCACGTGTTGTTaGAGGAGGCGCTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTERSTCC*RRRSLQ
Trigger: CTGAAGGGAGCGCCTCCTCCAACAACACGTGGATCT...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCCACGCCCACGTCACCTaGTCAGGTGCCATCGTCGTG +
Preference number: 4 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPHAHVT*SGAIVV
Trigger: CACGACGATGGCACCTGACCAGGTGACGTGGGCGTG...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp AACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTTTCCTGGTTGGAGCCTaGAGGGACAGGTCACACCGG +
Preference number: 4 (lower is better)
Translates to: NRTQIPTTWFLQINHPFPFLVGA*RDRSHR
Trigger: CCGGTGTGACCTGTCCCTTCAGGCTCCAACCAGGAA...AGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR TCA 90 bp TTGTCAGGCAACTTTAGTCCTCCTCCAATAGTGCAAATCAGACACGACAGTTCTTTCTGGGTTCTCCCCTaGGAGCAGCTTCGCGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSGNFSPPPIVQIRHDSSFWVLP*EQLRVF
Trigger: AAAAACGCGAAGCTGCTCTCAGGGGAGAACCCAGAA...AGAACTGTCGTGTCTGATTTGCACTATTGGAGGAGGACTAAAGTTGCCTGACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR TCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGTGTTCAGATGGGGGTTaGAGATGCGACTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLECSDGG*RCDSFW
Trigger: CCAAAATGAGTCGCATCTTCAACCCCCATCTGAACA...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR TCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGTCCTGCTATCATGTTTaGGGGCCCCCTTGTACGGAT +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLSCYHV*GPPCTD
Trigger: ATCCGTACAAGGGGGCCCTCAAACATGATAGCAGGA...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR TCA 90 bp TGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTAGGGAAGTTGATTCATCATGGCTTGTaGCTGAGAAAGCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CCSAKRVQREQFLHVGKLIHHGL*LRKRCG
Trigger: TCCACAGCGCTTTCTCAGTCACAAGCCATGATGAAT...CAACTTCCCTACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCAGGTGTACAGGTGGCTaGCGTGCAGGCTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPRCTGG*RAGSWW
Trigger: CCACCATGAGCCTGCACGGCAGCCACCTGTACACCT...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp TGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACAAAAGTCTGCAGTCCAGTTaGAAGCACCTGAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: WKLSHTHPGLKKQRKKHKSLQSS*KHLKSR
Trigger: TCTAGATTTCAGGTGCTTGCAACTGGACTGCAGACT...TTTGTGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGGGGGGTCATACGGTGTaGAGAGTCCACAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLGGHTV*RVHKAL
Trigger: CAAGGCTTTGTGGACTCTGCACACCGTATGACCCCC...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp CGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACTGAGGCAGGAAGTAAGGACCTTTTCACCCAGTaGCAATTTCCAAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: RGSRPASEVSLVTEAGSKDLFTQ*QFPKFN
Trigger: GTTGAATTTTGGAAATTGGCACTGGGTGAAAAGGTC...CTTACTTCCTGCCTCAGTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCGACCTTTTCACCCAGTaGCAATTTCCAAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSDLFTQ*QFPKFN
Trigger: GTTGAATTTTGGAAATTGGCACTGGGTGAAAAGGTC...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTGTTTGGCAAACTCCTaGCGTCCACAACCCGGACTG +
Preference number: 4 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLCLANS*RPQPGL
Trigger: CAGTCCGGGTTGTGGACGCCAGGAGTTTGCCAAACA...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR CCA 90 bp TTGTCAGGCAACTTTAGTCCTCCTCCAATAGTGCAAATCAGACACGACAGTTCTCCAGAGATGCTGCCCTaGACAAAACATCCAATGGCG +
Preference number: 4 (lower is better)
Translates to: LSGNFSPPPIVQIRHDSSPEMLP*TKHPMA
Trigger: CGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGG...AGAACTGTCGTGTCTGATTTGCACTATTGGAGGAGGACTAAAGTTGCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR CCA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCCTCATTTTGGAGACGTaGTCGTTGTCACAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSLILET*SLSQSR
Trigger: CCTAGACTGTGACAACGACCACGTCTCCAAAATGAG...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGTGCGGCAGTCTCCATTaGCAGTCTTGTTCAGATGGG +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLCGSLH*QSCSDG
Trigger: CCCATCTGAACAAGACTGCCAATGGAGACTGCCGCA...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CCA 90 bp AACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTCGTCCAGGCTGTTCTTaGTCAGTGCGAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: NRTQIPTTWFLQINHPFPRPGCS*SVRGAA
Trigger: AGCAGCCCCTCGCACTGACCAAGAACAGCCTGGACG...AGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGCCGCTTTGATCTaGAGCCACGTGTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLLAALI*SHVSPR
Trigger: TCTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAA...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGGTCACCAATTCATCATaGCTTGTGACTGAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRVTNSS*LVTEKA
Trigger: CGCTTTCTCAGTCACAAGCCATGATGAATTGGTGAC...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR GCA 90 bp GTCAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTATGCACCAGAGATGCTaGCCTGGACAAAACATCCAA +
Preference number: 4 (lower is better)
Translates to: VSNLLFSQESSKGAVSACMHQRC*PGQNIQ
Trigger: TTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCAT...ACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCAGATTACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR GCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGAGCTCAGGCAAACCATaGAGATCCACGTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLSSGKP*RSTCCW
Trigger: CCAACAACACGTGGATCTGCATGGTTTGCCTGAGCT...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGCAGTCTTGTTCAGATaGGGGTTGAAGATGCGACTC +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLAVLFR*GLKMRL
Trigger: GAGTCGCATCTTCAACCCCCATCTGAACAAGACTGC...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CCA 90 bp AGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTTCCTGTCACCCAGAGCTTTaGCAAAGTGGTCGTCCACGG +
Preference number: 4 (lower is better)
Translates to: RTQIPTTWFLQINHPFPSCHPEL*QSGRPR
Trigger: CCGTGGACGACCACTTTGCCAAAGCTCTGGGTGACA...GGAAGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGACGTTTAAAGCACTATaGAATCCTCCAACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRTFKAL*NPPTSA
Trigger: AGCTGAGGTTGGAGGATTCCATAGTGCTTTAAACGT...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAACCCACAAGAAAGCCTTaGGCCTCACAAACTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTEPTRKP*ASQTWQ
Trigger: TTGCCAAGTTTGTGAGGCCCAAGGCTTTCTTGTGGG...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000451674.6
CDS-3UTR TCA 90 bp TTGTCAGGCAACTTTAGTCCTCCTCCAATAGTGCAAATCAGACACGACAGTTCTTGTTCAGATGGGGGTTaGAGATGCGACTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: LSGNFSPPPIVQIRHDSSCSDGG*RCDSFW
Trigger: CCAAAATGAGTCGCATCTTCAACCCCCATCTGAACA...AGAACTGTCGTGTCTGATTTGCACTATTGGAGGAGGACTAAAGTTGCCTGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp TGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTAGGGAAGTTGAAAATCAATTGTTGCTaGGTAGCTCCTGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CCSAKRVQREQFLHVGKLKINCC*VAPGSS
Trigger: TGAAGAGCCAGGAGCTACTCAGCAACAATTGATTTT...CAACTTCCCTACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS-3UTR GCA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGGCTCCTTGTAATTCTTaGCCAGGCTCCTGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLAPCNS*PGSCGN
Trigger: ATTTCCGCAGGAGCCTGGGCAAGAATTACAAGGAGC...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR GCA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGTGTTTTTCAGCAGTTTaGCCTCAGAGTTCTGGCATA +
Preference number: 4 (lower is better)
Translates to: STDCSKLRQTMQIHVLLECFSAV*PQSSGI
Trigger: TATGCCAGAACTCTGAGGGCAAACTGCTGAAAAACA...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp CAGTGTTCTCATAGAATAACTGTTCCTGCACTTTTACAGACAAATCTACGACAAAGAGCTTTGGCAAAGTaGTCGTCCACGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: QCSHRITVPALLQTNLRQRALAK*SSTEPV
Trigger: CACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCT...TTGTCGTAGATTTGTCTGTAAAAGTGCAGGAACAGTTATTCTATGAGAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp AACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTTGTCACCCAGAGCTTTaGCAAAGTGGTCGTCCACGG +
Preference number: 4 (lower is better)
Translates to: NRTQIPTTWFLQINHPFPCHPEL*QSGRPR
Trigger: CCGTGGACGACCACTTTGCCAAAGCTCTGGGTGACA...AGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CCA 90 bp CTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTCACCCAGTGCCAATTTCCAACAGGCCACAGAGAATaGTATATTACAGATTTACAC +
Preference number: 4 (lower is better)
Translates to: LCDYKSQSSDLFTQCQFPTGHRE*YITDLH
Trigger: GTGTAAATCTGTAATATACCATTCTCTGTGGCCTGT...TGGAAATTGGCACTGGGTGAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAAAGATAAAATGCCCGTaGTTGGTAGAGTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTEKIKCP*LVESAV
Trigger: GACTGCAGACTCTACCAATCACGGGCATTTTATCTT...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGAGTCTGCAGTCCAGTTaGAAGCACCTGAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLSLQSS*KHLKSR
Trigger: TCTAGATTTCAGGTGCTTGCAACTGGACTGCAGACT...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CCA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTGGGCCTCACAAACTTaGCAAGCAGTCTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPWASQT*QAVSGT
Trigger: TGTGCCTGAGACTGCTTGCCAAGTTTGTGAGGCCCA...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451674.6
CDS-3UTR TCA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGGATGCAAAAATAAATaGTGTCAGCCTGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLGCKNK*CQPAAK
Trigger: TTTGGCTGCAGGCTGACATCATTTATTTTTGCATCC...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR TCA 90 bp CCATATCACAGATTGTCTGTCAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGACAGATTTACACACATaGAGAGAAGGTCAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: PYHRLSVSNLLFSQESSKTDLHT*REGQSA
Trigger: TGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGT...CTTTGAACTCTCTTGGCTGAACAGCAGATTACTGACAGACAATCTGTGATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAACTCGTGGCTATGAATaGAGATGCAGTGTTCTCATA +
Preference number: 4 (lower is better)
Translates to: LSCLRAPLYGYQASTKTETRGYE*RCSVLI
Trigger: TATGAGAACACTGCATCTGCATTCATAGCCACGAGT...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR GCA 90 bp TTGTCAGGCAACTTTAGTCCTCCTCCAATAGTGCAAATCAGACACGACAGTTCTCCAGCTCTTTGCTTTTaGCCCAAAAGAGTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: LSGNFSPPPIVQIRHDSSPALCF*PKRVKF
Trigger: AAACTTAACTCTTTTGGGGCAAAAGCAAAGAGCTGG...AGAACTGTCGTGTCTGATTTGCACTATTGGAGGAGGACTAAAGTTGCCTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS-3UTR CCA 90 bp GTCAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTCTTACAAGTCCTTCCTaGAAATGGAAAAGAGTGAAA +
Preference number: 4 (lower is better)
Translates to: VSNLLFSQESSKGAVSACLTSPS*KWKRVK
Trigger: TTTCACTCTTTTCCATTTCCAGGAAGGACTTGTAAG...ACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCAGATTACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS-3UTR CCA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCACAGGCCACAGAGAATaGTATATTACAGATTTACAC +
Preference number: 4 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPTGHRE*YITDLH
Trigger: GTGTAAATCTGTAATATACCATTCTCTGTGGCCTGT...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS GCA 90 bp AAGGGACAGGTCACACCGGCTGCGGGAGGGGCTGCTCGGCGCCACTaGGCTCAGAACGGCCGCGGCGGTCCCGGGCGCTCCGACGCCGCT +
Preference number: 5 (lower is better)
Translates to: KGQVTPAAGGAARRH*AQNGRGGPGRSDAA
Trigger: AGCGGCGTCGGAGCGCCCGGGACCGCCGCGGCCGTTCTGAGCGCAGTGGCGCCGAGCAGCCCCTCCCGCAGCCGGTGTGACCTGTCCCTT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000426568.5
ENST00000623028.1
CDS GCA 90 bp TGGTTGGAGCCTGAAGGGACAGGTCACACCGGCTGCGGGAGGGGCTaGTCGGCGCCACTGCGCTCAGAACGGCCGCGGCGGTCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: WLEPEGTGHTGCGRG*SAPLRSERPRRSRA
Trigger: CGCCCGGGACCGCCGCGGCCGTTCTGAGCGCAGTGGCGCCGAGCAGCCCCTCCCGCAGCCGGTGTGACCTGTCCCTTCAGGCTCCAACCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000426568.5
ENST00000623028.1
CDS GCA 90 bp CTGGCAGGCCCGGGCGCGGCACAGCCGCTGTGCGCGATGGGGCAGTaGGAGAGGTTGCAGTTGCGGGCGCCAGCCGAGGCACAGGTGATC +
Preference number: 5 (lower is better)
Translates to: LAGPGAAQPLCAMGQ*ERLQLRAPAEAQVI
Trigger: GATCACCTGTGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCACAGCGGCTGTGCCGCGCCCGGGCCTGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000418000.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS CCA 90 bp GGTGGCTGCCGTGCAGGCTCATGGTGGGGGCCACAGCGCGCTCGATaGGGCTGCGGCTCCGCTCCCGGGGGTCTCTGCGGCAGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: GGCRAGSWWGPQRAR*GCGSAPGGLCGSLH
Trigger: ATGGAGACTGCCGCAGAGACCCCCGGGAGCGGAGCCGCAGCCCCATCGAGCGCGCTGTGGCCCCCACCATGAGCCTGCACGGCAGCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 14 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424529.6
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000437722.1
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS GCA 90 bp CGTCTCCATTCCTGGTTGGAGCCTGAAGGGACAGGTCACACCGGCTaGGGGAGGGGCTGCTCGGCGCCACTGCGCTCAGAACGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: RLHSWLEPEGTGHTG*GRGCSAPLRSERPR
Trigger: CCGCGGCCGTTCTGAGCGCAGTGGCGCCGAGCAGCCCCTCCCGCAGCCGGTGTGACCTGTCCCTTCAGGCTCCAACCAGGAATGGAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000426568.5
ENST00000623028.1
CDS GCA 90 bp GCTGGCGGGCTGGCCCCTGCGAGAGGCGGACTCAGGGCTGCTGGATaGTCCGTCCTTGGCCGCTTTGATCTGGAGCCACGTGTCACCCAG +
Preference number: 5 (lower is better)
Translates to: AGGLAPARGGLRAAG*SVLGRFDLEPRVTQ
Trigger: CTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGGAGCATCCAGCAGCCCTGAGTCCGCCTCTCGCAGGGGCCAGCCCGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS GCA 90 bp CGCCCGGATGAATCACCTCCCGGCCACTGCTTCCCAGGCGTCATGTaGTCCCGGGGACGGCAGAAAACCGCACGCATCCTGCCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: RPDESPPGHCFPGVM*SRGRQKTARILPGR
Trigger: TCTCCCGGGCAGGATGCGTGCGGTTTTCTGCCGTCCCCGGGAGCACATGACGCCTGGGAAGCAGTGGCCGGGAGGTGATTCATCCGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS CCA 90 bp CTGCGCTCAGAACGGCCGCGGCGGTCCCGGGCGCTCCGACGCCGCTaGGTTTCCTCCCATTACAGCATGTTGCACTCCAGCGCTGCACTT +
Preference number: 5 (lower is better)
Translates to: LRSERPRRSRALRRR*VSSHYSMLHSSAAL
Trigger: AAGTGCAGCGCTGGAGTGCAACATGCTGTAATGGGAGGAAACCCAGCGGCGTCGGAGCGCCCGGGACCGCCGCGGCCGTTCTGAGCGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000426568.5
ENST00000623028.1
CDS CCA 90 bp TGCTCCCGGGGACGGCAGAAAACCGCACGCATCCTGCCCGGGAGATaGAAGTCGCCTCCGCTCCTGGTCAGGACTGTGCCCGAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: CSRGRQKTARILPGR*KSPPLLVRTVPERA
Trigger: GGCTCTCTCGGGCACAGTCCTGACCAGGAGCGGAGGCGACTTCCATCTCCCGGGCAGGATGCGTGCGGTTTTCTGCCGTCCCCGGGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS GCA 90 bp TCCTGCCCGGGAGATGGAAGTCGCCTCCGCTCCTGGTCAGGACTGTaGCCGAGAGAGCCCACGGCATCCCCGCGAACACCCAAAGGACTC +
Preference number: 5 (lower is better)
Translates to: SCPGDGSRLRSWSGL*PREPTASPRTPKGL
Trigger: GAGTCCTTTGGGTGTTCGCGGGGATGCCGTGGGCTCTCTCGGGCACAGTCCTGACCAGGAGCGGAGGCGACTTCCATCTCCCGGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS GCA 90 bp CAGGCGTCATGTGCTCCCGGGGACGGCAGAAAACCGCACGCATCCTaGCCGGGAGATGGAAGTCGCCTCCGCTCCTGGTCAGGACTGTGC +
Preference number: 5 (lower is better)
Translates to: QASCAPGDGRKPHAS*PGDGSRLRSWSGLC
Trigger: GCACAGTCCTGACCAGGAGCGGAGGCGACTTCCATCTCCCGGGCAGGATGCGTGCGGTTTTCTGCCGTCCCCGGGAGCACATGACGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS CCA 90 bp CTCGTCACCTGGCTCCATGCTGAACTTCCTCTTGCTGGGGCTGATTaGGGGAGGGCCGGTGCGGTGACTGCTGAGGGCAGAGGCCACCGG +
Preference number: 5 (lower is better)
Translates to: LVTWLHAELPLAGAD*GRAGAVTAEGRGHR
Trigger: CCGGTGGCCTCTGCCCTCAGCAGTCACCGCACCGGCCCTCCCCCAATCAGCCCCAGCAAGAGGAAGTTCAGCATGGAGCCAGGTGACGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000437722.1
ENST00000445411.5
ENST00000458499.5
CDS CCA 90 bp CGAGAGAGCCCACGGCATCCCCGCGAACACCCAAAGGACTCTGAGTaGCTCCGTGCCAGGCCTATCAGAGCCGCTGAGGCTGCACGGCAC +
Preference number: 5 (lower is better)
Translates to: RESPRHPREHPKDSE*LRARPIRAAEAARH
Trigger: GTGCCGTGCAGCCTCAGCGGCTCTGATAGGCCTGGCACGGAGCCACTCAGAGTCCTTTGGGTGTTCGCGGGGATGCCGTGGGCTCTCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS CCA 90 bp AAACCGCACGCATCCTGCCCGGGAGATGGAAGTCGCCTCCGCTCCTaGTCAGGACTGTGCCCGAGAGAGCCCACGGCATCCCCGCGAACA +
Preference number: 5 (lower is better)
Translates to: KPHASCPGDGSRLRS*SGLCPREPTASPRT
Trigger: TGTTCGCGGGGATGCCGTGGGCTCTCTCGGGCACAGTCCTGACCAGGAGCGGAGGCGACTTCCATCTCCCGGGCAGGATGCGTGCGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR CAA 90 bp CCTCCACCGAGCCGGTCAGCTGTGGGTGGTTTTCCTGTTACGACGCTCAGTAGCGGGCAGTGCGAGAGGTaGCAGTTGCGGGCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: PPPSRSAVGGFPVTTLSSGQCER*QLRAPA
Trigger: GGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCCC...GCTACTGAGCGTCGTAACAGGAAAACCACCCACAGCTGACCGGCTCGGTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS TCA 90 bp CTGAACTTCCTCTTGCTGGGGCTGATTGGGGGAGGGCCGGTGCGGTaGCTGCTGAGGGCAGAGGCCACCGGCAGGGTCTGTATTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LNFLLLGLIGGGPVR*LLRAEATGRVCILG
Trigger: ACCCAGAATACAGACCCTGCCGGTGGCCTCTGCCCTCAGCAGTCACCGCACCGGCCCTCCCCCAATCAGCCCCAGCAAGAGGAAGTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000437722.1
ENST00000445411.5
ENST00000458499.5
ENST00000623028.1
CDS GCA 90 bp GGCAAAGTGGTCGTCCACGGAGCCCGTGATGGACACGGAGTTGGGTaGCGGCTCGGGCTCCTTGTAATTCTTGCCCAGGCTCCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: GKVVVHGARDGHGVG*RLGLLVILAQAPAE
Trigger: TTCCGCAGGAGCCTGGGCAAGAATTACAAGGAGCCCGAGCCGGCACCCAACTCCGTGTCCATCACGGGCTCCGTGGACGACCACTTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS CCA 90 bp GCCGCTTTGATCTGGAGCCACGTGTCACCCAGAGCTTTGGCAAAGTaGTCGTCCACGGAGCCCGTGATGGACACGGAGTTGGGTGCCGGC +
Preference number: 5 (lower is better)
Translates to: AALIWSHVSPRALAK*SSTEPVMDTELGAG
Trigger: GCCGGCACCCAACTCCGTGTCCATCACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCTGGGTGACACGTGGCTCCAGATCAAAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp GACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAATGCGAGAGGTTGCAGTaGCGGGCGCCAGCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: DRTKHAVEAEPHTPRSQECERLQ*RAPAEA
Trigger: TGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCA...TTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS TCA 90 bp GGAGCTTCAAGACAGACATTGTTTTCCAGGCCCCGCTCGCCCGGATaGATCACCTCCCGGCCACTGCTTCCCAGGCGTCATGTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GASRQTLFSRPRSPG*ITSRPLLPRRHVLP
Trigger: CGGGAGCACATGACGCCTGGGAAGCAGTGGCCGGGAGGTGATTCATCCGGGCGAGCGGGGCCTGGAAAACAATGTCTGTCTTGAAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS CCA 90 bp GCGGACTCAGGGCTGCTGGATGCTCCGTCCTTGGCCGCTTTGATCTaGAGCCACGTGTCACCCAGAGCTTTGGCAAAGTGGTCGTCCACG +
Preference number: 5 (lower is better)
Translates to: ADSGLLDAPSLAALI*SHVSPRALAKWSST
Trigger: CGTGGACGACCACTTTGCCAAAGCTCTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGGAGCATCCAGCAGCCCTGAGTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS GCA 90 bp ACGCCGCTGGGTTTCCTCCCATTACAGCATGTTGCACTCCAGCGCTaGACTTCACACTCGCACACGCGCACACGCACACGCGCACAACTC +
Preference number: 5 (lower is better)
Translates to: TPLGFLPLQHVALQR*TSHSHTRTRTRAQL
Trigger: GAGTTGTGCGCGTGTGCGTGTGCGCGTGTGCGAGTGTGAAGTGCAGCGCTGGAGTGCAACATGCTGTAATGGGAGGAAACCCAGCGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000414047.1
ENST00000426568.5
ENST00000623028.1
CDS-3UTR CAA 90 bp GCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCATGCGAGAGGTTGCAGTaGCGGGCGCCAGCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: AVEAEPHTPRSQEAKEKACERLQ*RAPAEA
Trigger: TGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCA...TGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCGGGCAGTGCGAGAGGTaGCAGTTGCGGGCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRGQCER*QLRAPA
Trigger: GGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCCC...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCGTGATGGACACGGAGTaGGGTGCCGGCTCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: FKAQANHADPRVVGGGAPVMDTE*GAGSGS
Trigger: GGAGCCCGAGCCGGCACCCAACTCCGTGTCCATCAC...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS TCA 90 bp ACGTGTCACCCAGAGCTTTGGCAAAGTGGTCGTCCACGGAGCCCGTaGTGGACACGGAGTTGGGTGCCGGCTCGGGCTCCTTGTAATTCT +
Preference number: 5 (lower is better)
Translates to: TCHPELWQSGRPRSP*WTRSWVPARAPCNS
Trigger: AGAATTACAAGGAGCCCGAGCCGGCACCCAACTCCGTGTCCATCACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCTGGGTGACACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp GCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCAGCGTCCAGGCTGTTCTaGGTCAGTGCGAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: AVEAEPHTPRSQEAKEKAASRLF*VSARGC
Trigger: GCAGCCCCTCGCACTGACCAAGAACAGCCTGGACGC...TGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCTGCGAGAGGTTGCAGTaGCGGGCGCCAGCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALCERLQ*RAPAEA
Trigger: TGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCA...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCGTGATGGACACGGAGTaGGGTGCCGGCTCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRVMDTE*GAGSGS
Trigger: GGAGCCCGAGCCGGCACCCAACTCCGTGTCCATCAC...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGTCCCATTACAGCATGTaGCACTCCAGCGCTGCACTT +
Preference number: 5 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGSHYSM*HSSAAL
Trigger: AAGTGCAGCGCTGGAGTGCAACATGCTGTAATGGGA...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR CAA 90 bp CTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTCACCCAGTGCCAATTTCCATGCGAGAGGTTGCAGTaGCGGGCGCCAGCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: LCDYKSQSSDLFTQCQFPCERLQ*RAPAEA
Trigger: TGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCA...TGGAAATTGGCACTGGGTGAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGGGGCAGTGCGAGAGGTaGCAGTTGCGGGCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRGQCER*QLRAPA
Trigger: GGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCCC...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp ACGCCCTTGTTCACTGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACCGAGCCATGCAGATCCACGTGTaGTTGGAGGAGGCGCTCCCT +
Preference number: 5 (lower is better)
Translates to: TPLFTDKETCPRSVLHRAMQIHV*LEEALP
Trigger: AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCAT...GGCTCGGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp ACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGCCTGAATGCCAAAGCTaGGAAGCCCAGTACAGTGGG +
Preference number: 5 (lower is better)
Translates to: THMDRTKHAVEAEPHTPRPECQS*EAQYSG
Trigger: CCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGG...CCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp GTGGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTACCCAGAGTGACGCCCTaGTTCACTGACAAAGAGACC +
Preference number: 5 (lower is better)
Translates to: VESWPRRGSRPASEVSLVPRVTP*FTDKET
Trigger: GGTCTCTTTGTCAGTGAACAAGGGCGTCACTCTGGG...TACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp AGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCAAGATGCGACTCATTTaGGAGACGTGGTCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SQTPASHTAADPLLIARAKMRLI*ETWSLS
Trigger: TGACAACGACCACGTCTCCAAAATGAGTCGCATCTT...GGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGGCGTCCAGGCTGTTCTaGGTCAGTGCGAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRASRLF*VSARGC
Trigger: GCAGCCCCTCGCACTGACCAAGAACAGCCTGGACGC...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGTGCGAGAGGTTGCAGTaGCGGGCGCCAGCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEECERLQ*RAPAEA
Trigger: TGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCA...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGGGCAGTGCGAGAGGTaGCAGTTGCGGGCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: STDCSKLRQTMQIHVLLEGQCER*QLRAPA
Trigger: GGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCCC...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGGTGATGGACACGGAGTaGGGTGCCGGCTCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRVMDTE*GAGSGS
Trigger: GGAGCCCGAGCCGGCACCCAACTCCGTGTCCATCAC...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCCCGTCCTTGGCCGCTTaGATCTGGAGCCACGTGTCA +
Preference number: 5 (lower is better)
Translates to: FKAQANHADPRVVGGGAPPSLAA*IWSHVS
Trigger: TGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGG...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp GGAGTCCTGGCCCCGTCGGGGCAGCAGACCTGCATCAGAGGTTTCTTTGGTAACTGTTTGAGGGCCCCCTaGTACGGATACCAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: GVLAPSGQQTCIRGFFGNCLRAP*YGYQAS
Trigger: ACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACA...GTTACCAAAGAAACCTCTGATGCAGGTCTGCTGCCCCGACGGGGCCAGGACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS GCA 90 bp ATCGGAGTGGAAAGAGTCCCCTTCAGCCGCTCACACACCAGTGTTTaGTGTGTTTGGCAAACTCCTGGCGTCCACAACCCGGACTGCTCT +
Preference number: 5 (lower is better)
Translates to: IGVERVPFSRSHTSV*CVWQTPGVHNPDCS
Trigger: AGAGCAGTCCGGGTTGTGGACGCCAGGAGTTTGCCAAACACAGCAAACACTGGTGTGTGAGCGGCTGAAGGGGACTCTTTCCACTCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR CAA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGTTGGAGACGTGGTCGTaGTCACAGTCTAGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKLETWS*SQSRSS
Trigger: CGAGGACCTAGACTGTGACAACGACCACGTCTCCAA...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp CGAGGGCCTGCCAGGAGCTGGCCTCCCGCACTACTTGTGAGTAAAGTGAATATCCTGCGGCAGTCTCCATaGGCAGTCTTGTTCAGATGG +
Preference number: 5 (lower is better)
Translates to: RGPARSWPPALLVSKVNILRQSP*AVLFRW
Trigger: CCATCTGAACAAGACTGCCAATGGAGACTGCCGCAG...GATATTCACTTTACTCACAAGTAGTGCGGGAGGCCAGCTCCTGGCAGGCCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGTCCAGGCTGTTCTaGGTCAGTGCGAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEEASRLF*VSARGC
Trigger: GCAGCCCCTCGCACTGACCAAGAACAGCCTGGACGC...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCGTGTCACCCAGAGCTTaGGCAAAGTGGTCGTCCACG +
Preference number: 5 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSVSPRA*AKWSST
Trigger: CGTGGACGACCACTTTGCCAAAGCTCTGGGTGACAC...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCGTCCTTGGCCGCTTaGATCTGGAGCCACGTGTCA +
Preference number: 5 (lower is better)
Translates to: LFKAQANHADPRVVGGGAPSLAA*IWSHVS
Trigger: TGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGG...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCCCGTCCTTGGCCGCTTaGATCTGGAGCCACGTGTCA +
Preference number: 5 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRPSLAA*IWSHVS
Trigger: TGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGG...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTCAGATCCACGTGTTGTaGGAGGAGGCGCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPQIHVL*EEALPS
Trigger: TGAAGGGAGCGCCTCCTCCAACAACACGTGGATCTG...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCCAGATCCACGTGTTGTaGGAGGAGGCGCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: FKAQANHADPRVVGGGAPQIHVL*EEALPS
Trigger: TGAAGGGAGCGCCTCCTCCAACAACACGTGGATCTG...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTATGCAGATCCACGTGTaGTTGGAGGAGGCGCTCCCT +
Preference number: 5 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPMQIHV*LEEALP
Trigger: AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCAT...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp GACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAATTCCTGCTATCATGTTaGAGGGCCCCCTTGTACGGA +
Preference number: 5 (lower is better)
Translates to: DRTKHAVEAEPHTPRSQEFLLSC*RAPLYG
Trigger: TCCGTACAAGGGGGCCCTCAAACATGATAGCAGGAA...TTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS GCA 90 bp AGGGTCTGTATTCTGGGTTCTCCCCTGAGAGCAGCTTCGCCATGGTaGAGACCTGGATGTCTCCAACTTTTGAGTGCACAGGACTCAGGG +
Preference number: 5 (lower is better)
Translates to: RVCILGSPLRAASPW*RPGCLQLLSAQDSG
Trigger: CCCTGAGTCCTGTGCACTCAAAAGTTGGAGACATCCAGGTCTGCACCATGGCGAAGCTGCTCTCAGGGGAGAACCCAGAATACAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417466.5
ENST00000426568.5
CDS CCA 90 bp GGCAGGGTCTGTATTCTGGGTTCTCCCCTGAGAGCAGCTTCGCCATaGTGCAGACCTGGATGTCTCCAACTTTTGAGTGCACAGGACTCA +
Preference number: 5 (lower is better)
Translates to: GRVCILGSPLRAASP*CRPGCLQLLSAQDS
Trigger: TGAGTCCTGTGCACTCAAAAGTTGGAGACATCCAGGTCTGCACCATGGCGAAGCTGCTCTCAGGGGAGAACCCAGAATACAGACCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417466.5
ENST00000426568.5
CDS-3UTR CAA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCCGTCTCCATTCCTGGTaGGAGCCTGAAGGGACAGGT +
Preference number: 5 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRRLHSW*EPEGTG
Trigger: ACCTGTCCCTTCAGGCTCCAACCAGGAATGGAGACG...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR CAA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTTGGAGACGTGGTCGTaGTCACAGTCTAGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: FKAQANHADPRVVGGGAPLETWS*SQSRSS
Trigger: CGAGGACCTAGACTGTGACAACGACCACGTCTCCAA...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CAA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTGCGGCAGTCTCCATaGGCAGTCTTGTTCAGATGG +
Preference number: 5 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSLRQSP*AVLFRW
Trigger: CCATCTGAACAAGACTGCCAATGGAGACTGCCGCAG...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CAA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGCGTCCAGGCTGTTCTaGGTCAGTGCGAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: STDCSKLRQTMQIHVLLEASRLF*VSARGC
Trigger: GCAGCCCCTCGCACTGACCAAGAACAGCCTGGACGC...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGGGCAGTGCGAGAGGTaGCAGTTGCGGGCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLGQCER*QLRAPA
Trigger: GGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCCC...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGTGTCACCCAGAGCTTaGGCAAAGTGGTCGTCCACG +
Preference number: 5 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAVSPRA*AKWSST
Trigger: CGTGGACGACCACTTTGCCAAAGCTCTGGGTGACAC...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCCGTCCTTGGCCGCTTaGATCTGGAGCCACGTGTCA +
Preference number: 5 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRPSLAA*IWSHVS
Trigger: TGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGG...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCAGATCCACGTGTTGTaGGAGGAGGCGCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAQIHVL*EEALPS
Trigger: TGAAGGGAGCGCCTCCTCCAACAACACGTGGATCTG...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTGGAATGTATACTGCCTaGGCCCCAGCGTACGAGGAA +
Preference number: 5 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPGMYTA*APAYEE
Trigger: TTCCTCGTACGCTGGGGCCAAGGCAGTATACATTCC...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCTTGGGCCTCACAAACTaGGCAAGCAGTCTCAGGCAC +
Preference number: 5 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSLGLTN*ASSLRH
Trigger: GTGCCTGAGACTGCTTGCCAAGTTTGTGAGGCCCAA...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451674.6
CDS-3UTR CAA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGTCTCCATTCCTGGTaGGAGCCTGAAGGGACAGGT +
Preference number: 5 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRRLHSW*EPEGTG
Trigger: ACCTGTCCCTTCAGGCTCCAACCAGGAATGGAGACG...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR CAA 90 bp TTACAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGGCTTGGAGACGTGGTCGTaGTCACAGTCTAGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: LQIYTHEEKVRAHCRQRGLETWS*SQSRSS
Trigger: CGAGGACCTAGACTGTGACAACGACCACGTCTCCAA...GCCGCGCTGCCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTGTAAATCTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGTGATGGACACGGAGTaGGGTGCCGGCTCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLVMDTE*GAGSGS
Trigger: GGAGCCCGAGCCGGCACCCAACTCCGTGTCCATCAC...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp ACTTCACGGAGCCCCTTCTTAGAGCAGGGAGGGGGCTTTCTCAGTGAAATGTTTGTGTCACCCAGAGCTTaGGCAAAGTGGTCGTCCACG +
Preference number: 5 (lower is better)
Translates to: TSRSPFLEQGGGFLSEMFVSPRA*AKWSST
Trigger: CGTGGACGACCACTTTGCCAAAGCTCTGGGTGACAC...AAACATTTCACTGAGAAAGCCCCCTCCCTGCTCTAAGAAGGGGCTCCGTGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCTGTTTGAGGGCCCCCTaGTACGGATACCAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSCLRAP*YGYQAS
Trigger: ACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACA...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp CCTCCACCGAGCCGGTCAGCTGTGGGTGGTTTTCCTGTTACGACGCTCAGTAGCTTGTTTTTCAGCAGTTaGCCCTCAGAGTTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: PPPSRSAVGGFPVTTLSSLFFSS*PSEFWH
Trigger: ATGCCAGAACTCTGAGGGCAAACTGCTGAAAAACAA...GCTACTGAGCGTCGTAACAGGAAAACCACCCACAGCTGACCGGCTCGGTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp GCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGCCTTAACCCAACACTaGTATGTTAGACAAGAGTGG +
Preference number: 5 (lower is better)
Translates to: AHTWTEPNTPWKLSHTHPALTQH*YVRQEW
Trigger: CCACTCTTGTCTAACATACAAGTGTTGGGTTAAGGC...GGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413604.5
CDS-3UTR CAA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCTGCCTTTATGCATCTTaGGGGCCCCTCCCTAGATGG +
Preference number: 5 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALCLYAS*GPLPRW
Trigger: CCATCTAGGGAGGGGCCCCAAAGATGCATAAAGGCA...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413604.5
CDS-3UTR CAA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTGCTTCAAGACAGACATaGTTTTCCAGGCCCCGCTCG +
Preference number: 5 (lower is better)
Translates to: LFKAQANHADPRVVGGGAASRQT*FSRPRS
Trigger: CGAGCGGGGCCTGGAAAACAATGTCTGTCTTGAAGC...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS GCA 90 bp GAGAGCAGCTTCGCGTTTTTCGTCATCAGCATGCACCAGAGATGCTaGCCTGGACAAAACATCCAATGGCGTCTCCATTCCTGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: ESSFAFFVISMHQRC*PGQNIQWRLHSWLE
Trigger: CTCCAACCAGGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACGCGAAGCTGCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000417206.6
ENST00000418000.5
ENST00000419541.4
ENST00000445411.5
ENST00000623028.1
CDS GCA 90 bp CCTGAGAGCAGCTTCGCGTTTTTCGTCATCAGCATGCACCAGAGATaGTGCCCTGGACAAAACATCCAATGGCGTCTCCATTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PESSFAFFVISMHQR*CPGQNIQWRLHSWL
Trigger: CAACCAGGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACGCGAAGCTGCTCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000417206.6
ENST00000418000.5
ENST00000419541.4
ENST00000445411.5
ENST00000623028.1
CDS CCA 90 bp GTCTTGTTCAGATGGGGGTTGAAGATGCGACTCATTTTGGAGACGTaGTCGTTGTCACAGTCTAGGTCCTCGTCACCTGGCTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: VLFRWGLKMRLILET*SLSQSRSSSPGSML
Trigger: CAGCATGGAGCCAGGTGACGAGGACCTAGACTGTGACAACGACCACGTCTCCAAAATGAGTCGCATCTTCAACCCCCATCTGAACAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000437722.1
ENST00000445411.5
ENST00000458499.5
CDS CCA 90 bp CCAAAGAGCATGAAGACAGCCCAGCGTCCTCCCACAAGAAAGCCTTaGGCCTCACAAACTTGGCAAGCAGTCTCAGGCACAAAACTGGAT +
Preference number: 5 (lower is better)
Translates to: PKSMKTAQRPPTRKP*ASQTWQAVSGTKLD
Trigger: ATCCAGTTTTGTGCCTGAGACTGCTTGCCAAGTTTGTGAGGCCCAAGGCTTTCTTGTGGGAGGACGCTGGGCTGTCTTCATGCTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451674.6
CDS CCA 90 bp CTGTTGCCTCATCTGATCATATCAAGGAACAGCACGGTGTCTCACTaGATCTTAGCCCTTCGAAGAGCCGGTGTGGGGTTACAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: LLPHLIISRNSTVSH*ILALRRAGVGLQAS
Trigger: CGAAGCCTGTAACCCCACACCGGCTCTTCGAAGGGCTAAGATCCAGTGAGACACCGTGCTGTTCCTTGATATGATCAGATGAGGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623028.1
CDS-3UTR CAA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGTTGGAGACGTGGTCGTaGTCACAGTCTAGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRLETWS*SQSRSS
Trigger: CGAGGACCTAGACTGTGACAACGACCACGTCTCCAA...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CAA 90 bp GACCGAACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAATTGTTCAGATGGGGGTaGAAGATGCGACTCATTTTG +
Preference number: 5 (lower is better)
Translates to: DRTKHAVEAEPHTPRSQELFRWG*KMRLIL
Trigger: CAAAATGAGTCGCATCTTCAACCCCCATCTGAACAA...TTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGTTCGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp TTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTCTCCATTGGCAGTCTaGTTCAGATGGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: FKAQANHADPRVVGGGAPSPLAV*FRWGLK
Trigger: CTTCAACCCCCATCTGAACAAGACTGCCAATGGAGA...GGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CAA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCTGCGGCAGTCTCCATaGGCAGTCTTGTTCAGATGG +
Preference number: 5 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRLRQSP*AVLFRW
Trigger: CCATCTGAACAAGACTGCCAATGGAGACTGCCGCAG...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CAA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGCGTCCAGGCTGTTCTaGGTCAGTGCGAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLASRLF*VSARGC
Trigger: GCAGCCCCTCGCACTGACCAAGAACAGCCTGGACGC...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAGCGTCCAGGCTGTTCTaGGTCAGTGCGAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LSCLRAPLYGYQASTKTEASRLF*VSARGC
Trigger: GCAGCCCCTCGCACTGACCAAGAACAGCCTGGACGC...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTGCGAGAGGTTGCAGTaGCGGGCGCCAGCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLCERLQ*RAPAEA
Trigger: TGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCA...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGTGTCACCCAGAGCTTaGGCAAAGTGGTCGTCCACG +
Preference number: 5 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEEVSPRA*AKWSST
Trigger: CGTGGACGACCACTTTGCCAAAGCTCTGGGTGACAC...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGCAGATCCACGTGTTGTaGGAGGAGGCGCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRQIHVL*EEALPS
Trigger: TGAAGGGAGCGCCTCCTCCAACAACACGTGGATCTG...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGATGCAGATCCACGTGTaGTTGGAGGAGGCGCTCCCT +
Preference number: 5 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEEMQIHV*LEEALP
Trigger: AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCAT...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp ACAGATGTTCCACGCGTAGTTCCTGCTATCATGTTTGAGGGCCCCCTTGTACGGTTCCTGCTATCATGTTaGAGGGCCCCCTTGTACGGA +
Preference number: 5 (lower is better)
Translates to: TDVPRVVPAIMFEGPLVRFLLSC*RAPLYG
Trigger: TCCGTACAAGGGGGCCCTCAAACATGATAGCAGGAA...CCGTACAAGGGGGCCCTCAAACATGATAGCAGGAACTACGCGTGGAACATCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp ACGCCCTTGTTCACTGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACCGAGCCTTGTTTTTCAGCAGTTaGCCCTCAGAGTTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: TPLFTDKETCPRSVLHRALFFSS*PSEFWH
Trigger: ATGCCAGAACTCTGAGGGCAAACTGCTGAAAAACAA...GGCTCGGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCAGTGAACAAGGGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp AAGTATACACACGCACACACATGGACCGAACCAAACACGCCGTGGAAGCTGAGCCTGCATGTAGGGAAGTaGGAAGACACAAACCCCACC +
Preference number: 5 (lower is better)
Translates to: KYTHAHTWTEPNTPWKLSLHVGK*EDTNPT
Trigger: GGTGGGGTTTGTGTCTTCCAACTTCCCTACATGCAG...GCTCAGCTTCCACGGCGTGTTTGGTTCGGTCCATGTGTGTGCGTGTGTATACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp CTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCTGCATGTAGGGAAGTaGGAAGACACAAACCCCACC +
Preference number: 5 (lower is better)
Translates to: LFKAQANHADPRVVGGGALHVGK*EDTNPT
Trigger: GGTGGGGTTTGTGTCTTCCAACTTCCCTACATGCAG...AGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp TGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCTTAGAGCAGGGAGTTTCAAAAATCAATaGTTGCTGAGTAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: CRQRGSGKNFTEPLLRAGSFKNQ*LLSSSW
Trigger: CCAGGAGCTACTCAGCAACAATTGATTTTTGAAACT...CCCTGCTCTAAGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS GCA 90 bp GGCAACAGAGCAAGACCGTTTTTCGTCATCAGCATGCACCAGAGATaGTGCCCTGGACAAAACATCCAATGGCGTCTCCATTCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GNRARPFFVISMHQR*CPGQNIQWRLHSWL
Trigger: CAACCAGGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACGGTCTTGCTCTGTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417466.5
CDS GCA 90 bp AAACCAGCCTGGGCAACACAGCATGATCGTTTTTCGTCATCAGCATaGACCAGAGATGCTGCCCTGGACAAAACATCCAATGGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: KPAWATQHDRFSSSA*TRDAALDKTSNGVS
Trigger: GGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACGATCATGCTGTGTTGCCCAGGCTGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638314.1
CDS-3UTR CAA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGTCCCATTACAGCATGTaGCACTCCAGCGCTGCACTT +
Preference number: 5 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRSHYSM*HSSAAL
Trigger: AAGTGCAGCGCTGGAGTGCAACATGCTGTAATGGGA...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000426568.5
CDS-3UTR CAA 90 bp ACCAAACACGCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGTTGTTCAGATGGGGGTaGAAGATGCGACTCATTTTG +
Preference number: 5 (lower is better)
Translates to: TKHAVEAEPHTPRSQEAKLFRWG*KMRLIL
Trigger: CAAAATGAGTCGCATCTTCAACCCCCATCTGAACAA...CTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGCGTGTTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGTCTCCATTGGCAGTCTaGTTCAGATGGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEASPLAV*FRWGLK
Trigger: CTTCAACCCCCATCTGAACAAGACTGCCAATGGAGA...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CAA 90 bp TACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAGTGTCACCCAGAGCTTaGGCAAAGTGGTCGTCCACG +
Preference number: 5 (lower is better)
Translates to: YRKYRGLNAKAWKPSTVGVSPRA*AKWSST
Trigger: CGTGGACGACCACTTTGCCAAAGCTCTGGGTGACAC...TCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp AGCACTATGGAATCCTCCAACCTCAGCTCTAGTCTAACAAACTGCAGTGTTCAGCCGTCCTTGGCCGCTTaGATCTGGAGCCACGTGTCA +
Preference number: 5 (lower is better)
Translates to: STMESSNLSSSLTNCSVQPSLAA*IWSHVS
Trigger: TGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGG...CTGAACACTGCAGTTTGTTAGACTAGAGCTGAGGTTGGAGGATTCCATAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp TGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTAGGGAAGTTGCAGATCCACGTGTTGTaGGAGGAGGCGCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: CCSAKRVQREQFLHVGKLQIHVL*EEALPS
Trigger: TGAAGGGAGCGCCTCCTCCAACAACACGTGGATCTG...CAACTTCCCTACATGCAGAAACTGCTCCCTTTGAACTCTCTTGGCTGAACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGCAGATCCACGTGTTGTaGGAGGAGGCGCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: STDCSKLRQTMQIHVLLEQIHVL*EEALPS
Trigger: TGAAGGGAGCGCCTCCTCCAACAACACGTGGATCTG...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGATGCAGATCCACGTGTaGTTGGAGGAGGCGCTCCCT +
Preference number: 5 (lower is better)
Translates to: STDCSKLRQTMQIHVLLEMQIHV*LEEALP
Trigger: AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCAT...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS GCA 90 bp GAACCCATGGCCTCTGCAATCAGACAACGCCTCATCCTAAGACTGTaGAGCCTCACACAAGGCTTACAGCAAAGGAAAAGAATCCGCACA +
Preference number: 5 (lower is better)
Translates to: EPMASAIRQRLILRL*SLTQGLQQRKRIRT
Trigger: TGTGCGGATTCTTTTCCTTTGCTGTAAGCCTTGTGTGAGGCTGCACAGTCTTAGGATGAGGCGTTGTCTGATTGCAGAGGCCATGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413604.5
CDS GCA 90 bp AACAGAGCAAGACCGTTTTTCGTCATCAGCATGCACCAGAGATGCTaGCCTGGACAAAACATCCAATGGCGTCTCCATTCCTGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: NRARPFFVISMHQRC*PGQNIQWRLHSWLE
Trigger: CTCCAACCAGGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACGGTCTTGCTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417466.5
CDS-3UTR CAA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCAAGATGCGACTCATTTaGGAGACGTGGTCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRKMRLI*ETWSLS
Trigger: TGACAACGACCACGTCTCCAAAATGAGTCGCATCTT...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CAA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGTGTTTGAGGGCCCCCTaGTACGGATACCAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEECLRAP*YGYQAS
Trigger: ACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACA...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp ACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGTTCCTGCTATCATGTTaGAGGGCCCCCTTGTACGGA +
Preference number: 5 (lower is better)
Translates to: TDCSKLRQTMQIHVLLEEFLLSC*RAPLYG
Trigger: TCCGTACAAGGGGGCCCTCAAACATGATAGCAGGAA...CTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGGCATCAGAGGTTTCTTaGGTAACTGAGGCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEAASEVS*VTEAGS
Trigger: ACTTCCTGCCTCAGTTACCAAAGAAACCTCTGATGC...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCGGAATGTATACTGCCTaGGCCCCAGCGTACGAGGAA +
Preference number: 5 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSGMYTA*APAYEE
Trigger: TTCCTCGTACGCTGGGGCCAAGGCAGTATACATTCC...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp TACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAGTGGGACCCAGAGTGACGCCCTaGTTCACTGACAAAGAGACC +
Preference number: 5 (lower is better)
Translates to: YRKYRGLNAKAWKPSTVGPRVTP*FTDKET
Trigger: GGTCTCTTTGTCAGTGAACAAGGGCGTCACTCTGGG...TCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp GTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGTCCCACAAGAAAGCCTaGGGCCTCACAAACTTGGCA +
Preference number: 5 (lower is better)
Translates to: VLTVQSSGKPCRSTCCWRSHKKA*GLTNLA
Trigger: TGCCAAGTTTGTGAGGCCCAAGGCTTTCTTGTGGGA...CCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451674.6
CDS TCA 90 bp GCGTTTCAGAAGTCCTTACAAGTCCTTCCTGGAAATGGAAAAGAGTaGAAAAGAGAAACGCGCAGCCCGTTTCCTAGGACAAAGCGGCGC +
Preference number: 5 (lower is better)
Translates to: AFQKSLQVLPGNGKE*KRETRSPFPRTKRR
Trigger: GCGCCGCTTTGTCCTAGGAAACGGGCTGCGCGTTTCTCTTTTTCACTCTTTTCCATTTCCAGGAAGGACTTGTAAGGACTTCTGAAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS GCA 90 bp TGCATTTCTAACAAGTTCCCAGGTGACGGTTTTTCGTCATCAGCATaGACCAGAGATGCTGCCCTGGACAAAACATCCAATGGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: CISNKFPGDGFSSSA*TRDAALDKTSNGVS
Trigger: GGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACCGTCACCTGGGAACTTGTTAGAAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426568.5
CDS-3UTR CAA 90 bp TACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAGTGGGACAGTGTTTGCTGTGTTaGGCAAACTCCTGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: YRKYRGLNAKAWKPSTVGQCLLC*ANSWRP
Trigger: TGGACGCCAGGAGTTTGCCAAACACAGCAAACACTG...TCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS-3UTR CAA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGAAGATGCGACTCATTTaGGAGACGTGGTCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRKMRLI*ETWSLS
Trigger: TGACAACGACCACGTCTCCAAAATGAGTCGCATCTT...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CAA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGCCGTCCTTGGCCGCTTaGATCTGGAGCCACGTGTCA +
Preference number: 5 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLPSLAA*IWSHVS
Trigger: TGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGG...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp AGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGTGTTTGAGGGCCCCCTaGTACGGATACCAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: STDCSKLRQTMQIHVLLECLRAP*YGYQAS
Trigger: ACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACA...CTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp ACTTCACGGAGCCCCTTCTTAGAGCAGGGAGGGGGCTTTCTCAGTGAAATGTTTGCATCAGAGGTTTCTTaGGTAACTGAGGCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: TSRSPFLEQGGGFLSEMFASEVS*VTEAGS
Trigger: ACTTCCTGCCTCAGTTACCAAAGAAACCTCTGATGC...AAACATTTCACTGAGAAAGCCCCCTCCCTGCTCTAAGAAGGGGCTCCGTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp TCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCTACACCATATCACAGATaGTCTGTCAGTAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: SKLRQTMQIHVLLEEALPTPYHR*SVSNLL
Trigger: CAGCAGATTACTGACAGACAATCTGTGATATGGTGT...AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp GTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCTCTCCATTGGCAGTCTaGTTCATTTCCAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: VQSSGKPCRSTCCWRRRSSPLAV*FISSSF
Trigger: AAATGAGCTGGAAATGAACAAGACTGCCAATGGAGA...GGAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR CAA 90 bp CTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGTTGTTCAGATGGGGGTaGAAGATGCGACTCATTTTG +
Preference number: 5 (lower is better)
Translates to: LTVQSSGKPCRSTCCWRRLFRWG*KMRLIL
Trigger: CAAAATGAGTCGCATCTTCAACCCCCATCTGAACAA...CCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CAA 90 bp TTTTTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGATGCAGATCCACGTGTaGTTGGAGGAGGCGCTCCCT +
Preference number: 5 (lower is better)
Translates to: FLSTDCSKLRQTMQIHVLMQIHV*LEEALP
Trigger: AGGGAGCGCCTCCTCCAACAACACGTGGATCTGCAT...CAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp GCCGTGGAAGCTGAGCCACACACACCCCGGTCTCAAGAAGCAAAGGAAAAAGCACCAACAACATGGTTTTaGCAAATAAACCATCCCTTC +
Preference number: 5 (lower is better)
Translates to: AVEAEPHTPRSQEAKEKAPTTWF*QINHPF
Trigger: GAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGG...TGCTTTTTCCTTTGCTTCTTGAGACCGGGGTGTGTGTGGCTCAGCTTCCACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp GACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGACACCATATCACAGATaGTCTGTCAGTAATCTGCTG +
Preference number: 5 (lower is better)
Translates to: DCSKLRQTMQIHVLLEEATPYHR*SVSNLL
Trigger: CAGCAGATTACTGACAGACAATCTGTGATATGGTGT...CGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp CAGCCACTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTCACCCAGTGCCAACTGTGTCTGTCATGCTaGCTTCATCTAATTTCTAGT +
Preference number: 5 (lower is better)
Translates to: QPLCDYKSQSSDLFTQCQLCLSC*LHLISS
Trigger: ACTAGAAATTAGATGAAGCAAGCATGACAGACACAG...TTGGCACTGGGTGAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGCTGCGGCAGTCTCCATaGGCAGTCTTGTTCCTCACT +
Preference number: 5 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLLRQSP*AVLFLT
Trigger: AGTGAGGAACAAGACTGCCAATGGAGACTGCCGCAG...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451674.6
CDS TCA 90 bp GCTTCGCAGAGACGTTTAATGAATACTCACATCTTCCTTCTCTTCTaGCTTAAATCCAGTCCAGGTGGGCACCCATCGACTGCACAGCTT +
Preference number: 5 (lower is better)
Translates to: ASQRRLMNTHIFLLF*LKSSPGGHPSTAQL
Trigger: AAGCTGTGCAGTCGATGGGTGCCCACCTGGACTGGATTTAAGTCAGAAGAGAAGGAAGATGTGAGTATTCATTAAACGTCTCTGCGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414047.1
CDS-3UTR CAA 90 bp TGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCCCAACAACATGGTTTTaGCAAATAAACCATCCCTTC +
Preference number: 5 (lower is better)
Translates to: CSKLRQTMQIHVLLEEALPTTWF*QINHPF
Trigger: GAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGG...GAGCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp CTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTCACCCAGTGCCAATTTCCATCATCCTTAAACCCTTaGTTTTTCAGCAGTTTGCCC +
Preference number: 5 (lower is better)
Translates to: LCDYKSQSSDLFTQCQFPSSLNP*FFSSLP
Trigger: GGGCAAACTGCTGAAAAACAAAGGGTTTAAGGATGA...TGGAAATTGGCACTGGGTGAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGCTGCGGCAGTCTCCATaGGCAGTCTTGTTCATTTCC +
Preference number: 5 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLLRQSP*AVLFIS
Trigger: GGAAATGAACAAGACTGCCAATGGAGACTGCCGCAG...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS-3UTR CAA 90 bp ACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGGAGGAGGCGCTCTCCATTGGCAGTCTaGTTCCTCACTTTAATCATT +
Preference number: 5 (lower is better)
Translates to: TVQSSGKPCRSTCCWRRRSPLAV*FLTLII
Trigger: AATGATTAAAGTGAGGAACAAGACTGCCAATGGAGA...GCGCCTCCTCCAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451674.6
CDS TCA 90 bp GGGCTTACTGGTAGACGGTGTATGTACTGTATCCCCGATCGAGTATaGAAACAGCGTTTCAGAAGTCCTTACAAGTCCTTCCTGGAAATG +
Preference number: 5 (lower is better)
Translates to: GLTGRRCMYCIPDRV*KQRFRSPYKSFLEM
Trigger: CATTTCCAGGAAGGACTTGTAAGGACTTCTGAAACGCTGTTTTCATACTCGATCGGGGATACAGTACATACACCGTCTACCAGTAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS-3UTR CAA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCGTGTCACCCAGAGCTTaGGCAAAGTGGTCGTCCACG +
Preference number: 5 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPVSPRA*AKWSST
Trigger: CGTGGACGACCACTTTGCCAAAGCTCTGGGTGACAC...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
ENST00000451674.6
CDS-3UTR CAA 90 bp CCATATCACAGATTGTCTGTCAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGTCTCCATTGGCAGTCTaGTTCAGATGGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PYHRLSVSNLLFSQESSKSPLAV*FRWGLK
Trigger: CTTCAACCCCCATCTGAACAAGACTGCCAATGGAGA...CTTTGAACTCTCTTGGCTGAACAGCAGATTACTGACAGACAATCTGTGATATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCCTGCGGCAGTCTCCATaGGCAGTCTTGTTCAGATGG +
Preference number: 5 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPLRQSP*AVLFRW
Trigger: CCATCTGAACAAGACTGCCAATGGAGACTGCCGCAG...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAAGCATCAGAGGTTTCTTaGGTAACTGAGGCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: LSCLRAPLYGYQASTKTEASEVS*VTEAGS
Trigger: ACTTCCTGCCTCAGTTACCAAAGAAACCTCTGATGC...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp AACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTCCTGAATGCCAAAGCTaGGAAGCCCAGTACAGTGGG +
Preference number: 5 (lower is better)
Translates to: NRTQIPTTWFLQINHPFPPECQS*EAQYSG
Trigger: CCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAGG...AGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp ACTGAGGCAGGAAGTAAGGATGCTACATTAGACAGATGTTCCACGCGTAGTTCCCACAGAATGCCGATATaGTTGTTCATCTTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: TEAGSKDATLDRCSTRSSHRMPI*LFILSK
Trigger: CTTGGACAAGATGAACAACAATATCGGCATTCTGTG...GGAACTACGCGTGGAACATCTGTCTAATGTAGCATCCTTACTTCCTGCCTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS-3UTR CAA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGTTGTTCAGATGGGGGTaGAAGATGCGACTCATTTTG +
Preference number: 5 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLLFRWG*KMRLIL
Trigger: CAAAATGAGTCGCATCTTCAACCCCCATCTGAACAA...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000426568.5
ENST00000430365.7
CDS-3UTR CAA 90 bp CTATCATGTTTGAGGGCCCCCTTGTACGGATACCAAGCAAGTACAAAAACAGAATTCTCAGTGAAATGTTaGGTTTTCTGCTGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LSCLRAPLYGYQASTKTEFSVKC*VFCCLL
Trigger: GAGGAGGCAGCAGAAAACCAAACATTTCACTGAGAA...TTCTGTTTTTGTACTTGCTTGGTATCCGTACAAGGGGGCCCTCAAACATGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTCTCCATTGGCAGTCTaGTTCAGATGGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPSPLAV*FRWGLK
Trigger: CTTCAACCCCCATCTGAACAAGACTGCCAATGGAGA...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp AGCACTATGGAATCCTCCAACCTCAGCTCTAGTCTAACAAACTGCAGTGTTCAGCCAACAACATGGTTTTaGCAAATAAACCATCCCTTC +
Preference number: 5 (lower is better)
Translates to: STMESSNLSSSLTNCSVQPTTWF*QINHPF
Trigger: GAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGG...CTGAACACTGCAGTTTGTTAGACTAGAGCTGAGGTTGGAGGATTCCATAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp TTAAGTACTGACTGTTCAAAGCTCAGGCAAACCATGCAGATCCACGTGTTGTTGTCATCCTTAAACCCTTaGTTTTTCAGCAGTTTGCCC +
Preference number: 5 (lower is better)
Translates to: LSTDCSKLRQTMQIHVLLSSLNP*FFSSLP
Trigger: GGGCAAACTGCTGAAAAACAAAGGGTTTAAGGATGA...CAACAACACGTGGATCTGCATGGTTTGCCTGAGCTTTGAACAGTCAGTACTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp TTGTCAGGCAACTTTAGTCCTCCTCCAATAGTGCAAATCAGACACGACAGTTCTTTCAAAAATCAATTGTaGCTGAGTAGCTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LSGNFSPPPIVQIRHDSSFKNQL*LSSSWL
Trigger: GAGCCAGGAGCTACTCAGCAACAATTGATTTTTGAA...AGAACTGTCGTGTCTGATTTGCACTATTGGAGGAGGACTAAAGTTGCCTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS-3UTR CAA 90 bp AGCACTATGGAATCCTCCAACCTCAGCTCTAGTCTAACAAACTGCAGTGTTCAGAGAATGCCGATATTGTaGTTCATCTTGTCCAAGTAC +
Preference number: 5 (lower is better)
Translates to: STMESSNLSSSLTNCSVQRMPIL*FILSKY
Trigger: GTACTTGGACAAGATGAACAACAATATCGGCATTCT...CTGAACACTGCAGTTTGTTAGACTAGAGCTGAGGTTGGAGGATTCCATAGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS-3UTR CAA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCAAGATGCGACTCATTTaGGAGACGTGGTCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPKMRLI*ETWSLS
Trigger: TGACAACGACCACGTCTCCAAAATGAGTCGCATCTT...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000430365.7
CDS-3UTR CAA 90 bp TTGTCAGGCAACTTTAGTCCTCCTCCAATAGTGCAAATCAGACACGACAGTTCTCCAACAACATGGTTTTaGCAAATAAACCATCCCTTC +
Preference number: 5 (lower is better)
Translates to: LSGNFSPPPIVQIRHDSSPTTWF*QINHPF
Trigger: GAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGG...AGAACTGTCGTGTCTGATTTGCACTATTGGAGGAGGACTAAAGTTGCCTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp AAACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTTCTCAGTGAAATGTTaGGTTTTCTGCTGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: KQNTNPNNMVFANKPSLPFSVKC*VFCCLL
Trigger: GAGGAGGCAGCAGAAAACCAAACATTTCACTGAGAA...GGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS-3UTR CAA 90 bp AACAGAACACAAATCCCAACAACATGGTTTTTGCAAATAAACCATCCCTTCCCTCTGTGTCTGTCATGCTaGCTTCATCTAATTTCTAGT +
Preference number: 5 (lower is better)
Translates to: NRTQIPTTWFLQINHPFPLCLSC*LHLISS
Trigger: ACTAGAAATTAGATGAAGCAAGCATGACAGACACAG...AGGGAAGGGATGGTTTATTTGCAAAAACCATGTTGTTGGGATTTGTGTTCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273038.7
ENST00000430365.7
CDS GCA 72 bp GTCACACCGGCTGCGGGAGGGGCTGCTCGGCGCCACTaGGCTCAGAACGGCCGCGGCGGTCCCGGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: VTPAAGGAARRH*AQNGRGGPGRS
Trigger: GGAGCGCCCGGGACCGCCGCGGCCGTTCTGAGCGCAGTGGCGCCGAGCAGCCCCTCCCGCAGCCGGTGTGAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000426568.5
ENST00000623028.1
CDS CCA 72 bp CGTGCAGGCTCATGGTGGGGGCCACAGCGCGCTCGATaGGGCTGCGGCTCCGCTCCCGGGGGTCTCTGCGGC +
Preference number: 6 (lower is better)
Translates to: RAGSWWGPQRAR*GCGSAPGGLCG
Trigger: GCCGCAGAGACCCCCGGGAGCGGAGCCGCAGCCCCATCGAGCGCGCTGTGGCCCCCACCATGAGCCTGCACG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 14 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424529.6
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000437722.1
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS GCA 72 bp CCTGAAGGGACAGGTCACACCGGCTGCGGGAGGGGCTaGTCGGCGCCACTGCGCTCAGAACGGCCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: PEGTGHTGCGRG*SAPLRSERPRR
Trigger: CCGCCGCGGCCGTTCTGAGCGCAGTGGCGCCGAGCAGCCCCTCCCGCAGCCGGTGTGACCTGTCCCTTCAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000426568.5
ENST00000623028.1
CDS GCA 72 bp CCGGGCGCGGCACAGCCGCTGTGCGCGATGGGGCAGTaGGAGAGGTTGCAGTTGCGGGCGCCAGCCGAGGCA +
Preference number: 6 (lower is better)
Translates to: PGAAQPLCAMGQ*ERLQLRAPAEA
Trigger: TGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCACAGCGGCTGTGCCGCGCCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000418000.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS CAA 90 bp CCGGGCGCGGCACAGCCGCTGTGCGCGATGGGGCAGTGCGAGAGGTaGCAGTTGCGGGCGCCAGCCGAGGCACAGGTGATCACGGAGGGC +
Preference number: 6 (lower is better)
Translates to: PGAAQPLCAMGQCER*QLRAPAEAQVITEG
Trigger: GCCCTCCGTGATCACCTGTGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCACAGCGGCTGTGCCGCGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000418000.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS GCA 72 bp CCCCCGGGGTCAGTGTGGGCGAGAGGCCGGCTGGCCTaGTGGCGTCCAGGCTGTTCTTGGTCAGTGCGAGGG +
Preference number: 6 (lower is better)
Translates to: PPGSVWARGRLA*WRPGCSWSVRG
Trigger: CCCTCGCACTGACCAAGAACAGCCTGGACGCCAGCAGGCCAGCCGGCCTCTCGCCCACACTGACCCCGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000418000.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS CCA 72 bp GGAGGGAGGTGTACAGGTGGCTGCCGTGCAGGCTCATaGTGGGGGCCACAGCGCGCTCGATGGGGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: GGRCTGGCRAGS*WGPQRARWGCG
Trigger: GCCGCAGCCCCATCGAGCGCGCTGTGGCCCCCACCATGAGCCTGCACGGCAGCCACCTGTACACCTCCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424529.6
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS CCA 72 bp CCGCTCCCCCGGGGTCAGTGTGGGCGAGAGGCCGGCTaGCCTGCTGGCGTCCAGGCTGTTCTTGGTCAGTGC +
Preference number: 6 (lower is better)
Translates to: PLPRGQCGREAG*PAGVQAVLGQC
Trigger: GCACTGACCAAGAACAGCCTGGACGCCAGCAGGCCAGCCGGCCTCTCGCCCACACTGACCCCGGGGGAGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000418000.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS CAA 90 bp GCGGCACAGCCGCTGTGCGCGATGGGGCAGTGCGAGAGGTTGCAGTaGCGGGCGCCAGCCGAGGCACAGGTGATCACGGAGGGCCGGTTC +
Preference number: 6 (lower is better)
Translates to: AAQPLCAMGQCERLQ*RAPAEAQVITEGRF
Trigger: GAACCGGCCCTCCGTGATCACCTGTGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCACAGCGGCTGTGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000418000.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS TCA 72 bp AGAGGTTGCAGTTGCGGGCGCCAGCCGAGGCACAGGTaGTCACGGAGGGCCGGTTCTGCTGCCGCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: RGCSCGRQPRHR*SRRAGSAAAPP
Trigger: CGGGGGAGCGGCAGCAGAACCGGCCCTCCGTGATCACCTGTGCCTCGGCTGGCGCCCGCAACTGCAACCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000418000.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS CCA 72 bp CCGGGGTCAGTGTGGGCGAGAGGCCGGCTGGCCTGCTaGCGTCCAGGCTGTTCTTGGTCAGTGCGAGGGGCT +
Preference number: 6 (lower is better)
Translates to: PGSVWARGRLAC*RPGCSWSVRGA
Trigger: AGCCCCTCGCACTGACCAAGAACAGCCTGGACGCCAGCAGGCCAGCCGGCCTCTCGCCCACACTGACCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000418000.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS CCA 72 bp GAACGGCCGCGGCGGTCCCGGGCGCTCCGACGCCGCTaGGTTTCCTCCCATTACAGCATGTTGCACTCCAGC +
Preference number: 6 (lower is better)
Translates to: ERPRRSRALRRR*VSSHYSMLHSS
Trigger: GCTGGAGTGCAACATGCTGTAATGGGAGGAAACCCAGCGGCGTCGGAGCGCCCGGGACCGCCGCGGCCGTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273038.7
ENST00000426568.5
ENST00000623028.1
CDS CAA 72 bp GAGAGGCCGGCTGGCCTGCTGGCGTCCAGGCTGTTCTaGGTCAGTGCGAGGGGCTGCTCCAGGCCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: ERPAGLLASRLF*VSARGCSRPRL
Trigger: CAGCCTTGGCCTGGAGCAGCCCCTCGCACTGACCAAGAACAGCCTGGACGCCAGCAGGCCAGCCGGCCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000418000.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS CAA 72 bp CCGCTGTGCGCGATGGGGCAGTGCGAGAGGTTGCAGTaGCGGGCGCCAGCCGAGGCACAGGTGATCACGGAG +
Preference number: 6 (lower is better)
Translates to: PLCAMGQCERLQ*RAPAEAQVITE
Trigger: CTCCGTGATCACCTGTGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCACAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000418000.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS CAA 72 bp GCACAGCCGCTGTGCGCGATGGGGCAGTGCGAGAGGTaGCAGTTGCGGGCGCCAGCCGAGGCACAGGTGATC +
Preference number: 6 (lower is better)
Translates to: AQPLCAMGQCER*QLRAPAEAQVI
Trigger: GATCACCTGTGCCTCGGCTGGCGCCCGCAACTGCAACCTCTCGCACTGCCCCATCGCGCACAGCGGCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000418000.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000445411.5
ENST00000451674.6
ENST00000458499.5
CDS GCA 72 bp GGAGATGGAAGTCGCCTCCGCTCCTGGTCAGGACTGTaGCCGAGAGAGCCCACGGCATCCCCGCGAACACCC +
Preference number: 6 (lower is better)
Translates to: GDGSRLRSWSGL*PREPTASPRTP
Trigger: GGGTGTTCGCGGGGATGCCGTGGGCTCTCTCGGGCACAGTCCTGACCAGGAGCGGAGGCGACTTCCATCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS CCA 72 bp GCATCCTGCCCGGGAGATGGAAGTCGCCTCCGCTCCTaGTCAGGACTGTGCCCGAGAGAGCCCACGGCATCC +
Preference number: 6 (lower is better)
Translates to: ASCPGDGSRLRS*SGLCPREPTAS
Trigger: GGATGCCGTGGGCTCTCTCGGGCACAGTCCTGACCAGGAGCGGAGGCGACTTCCATCTCCCGGGCAGGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS GCA 72 bp CTGGCCCCTGCGAGAGGCGGACTCAGGGCTGCTGGATaGTCCGTCCTTGGCCGCTTTGATCTGGAGCCACGT +
Preference number: 6 (lower is better)
Translates to: LAPARGGLRAAG*SVLGRFDLEPR
Trigger: ACGTGGCTCCAGATCAAAGCGGCCAAGGACGGAGCATCCAGCAGCCCTGAGTCCGCCTCTCGCAGGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS GCA 72 bp TGTGCTCCCGGGGACGGCAGAAAACCGCACGCATCCTaGCCGGGAGATGGAAGTCGCCTCCGCTCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: CAPGDGRKPHAS*PGDGSRLRSWS
Trigger: TGACCAGGAGCGGAGGCGACTTCCATCTCCCGGGCAGGATGCGTGCGGTTTTCTGCCGTCCCCGGGAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS CCA 72 bp GGACGGCAGAAAACCGCACGCATCCTGCCCGGGAGATaGAAGTCGCCTCCGCTCCTGGTCAGGACTGTGCCC +
Preference number: 6 (lower is better)
Translates to: GRQKTARILPGR*KSPPLLVRTVP
Trigger: GGGCACAGTCCTGACCAGGAGCGGAGGCGACTTCCATCTCCCGGGCAGGATGCGTGCGGTTTTCTGCCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS TCA 72 bp CCAGAGCTTTGGCAAAGTGGTCGTCCACGGAGCCCGTaGTGGACACGGAGTTGGGTGCCGGCTCGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: PELWQSGRPRSP*WTRSWVPARAP
Trigger: AGGAGCCCGAGCCGGCACCCAACTCCGTGTCCATCACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS GCA 72 bp GAATCACCTCCCGGCCACTGCTTCCCAGGCGTCATGTaGTCCCGGGGACGGCAGAAAACCGCACGCATCCTG +
Preference number: 6 (lower is better)
Translates to: ESPPGHCFPGVM*SRGRQKTARIL
Trigger: CAGGATGCGTGCGGTTTTCTGCCGTCCCCGGGAGCACATGACGCCTGGGAAGCAGTGGCCGGGAGGTGATTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS CCA 72 bp CCACGGCATCCCCGCGAACACCCAAAGGACTCTGAGTaGCTCCGTGCCAGGCCTATCAGAGCCGCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: PRHPREHPKDSE*LRARPIRAAEA
Trigger: AGCCTCAGCGGCTCTGATAGGCCTGGCACGGAGCCACTCAGAGTCCTTTGGGTGTTCGCGGGGATGCCGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS CAA 90 bp TCCCGGGCGCTCCGACGCCGCTGGGTTTCCTCCCATTACAGCATGTaGCACTCCAGCGCTGCACTTCACACTCGCACACGCGCACACGCA +
Preference number: 6 (lower is better)
Translates to: SRALRRRWVSSHYSM*HSSAALHTRTRAHA
Trigger: TGCGTGTGCGCGTGTGCGAGTGTGAAGTGCAGCGCTGGAGTGCAACATGCTGTAATGGGAGGAAACCCAGCGGCGTCGGAGCGCCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000414047.1
ENST00000426568.5
ENST00000623028.1
CDS GCA 72 bp CGGAGTTGGGTGCCGGCTCGGGCTCCTTGTAATTCTTaGCCAGGCTCCTGCGGAAATGCTCCTCCACCACGG +
Preference number: 6 (lower is better)
Translates to: RSWVPARAPCNS*PGSCGNAPPPR
Trigger: CCGTGGTGGAGGAGCATTTCCGCAGGAGCCTGGGCAAGAATTACAAGGAGCCCGAGCCGGCACCCAACTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS GCA 72 bp GTCGTCCACGGAGCCCGTGATGGACACGGAGTTGGGTaGCGGCTCGGGCTCCTTGTAATTCTTGCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: VVHGARDGHGVG*RLGLLVILAQA
Trigger: AGCCTGGGCAAGAATTACAAGGAGCCCGAGCCGGCACCCAACTCCGTGTCCATCACGGGCTCCGTGGACGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS CAA 72 bp CGGCTCCGCTCCCGGGGGTCTCTGCGGCAGTCTCCATaGGCAGTCTTGTTCAGATGGGGGTTGAAGATGCGA +
Preference number: 6 (lower is better)
Translates to: RLRSRGSLRQSP*AVLFRWGLKMR
Trigger: TCGCATCTTCAACCCCCATCTGAACAAGACTGCCAATGGAGACTGCCGCAGAGACCCCCGGGAGCGGAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000437722.1
ENST00000445411.5
ENST00000458499.5
CDS CAA 90 bp CCGTCCTTGGCCGCTTTGATCTGGAGCCACGTGTCACCCAGAGCTTaGGCAAAGTGGTCGTCCACGGAGCCCGTGATGGACACGGAGTTG +
Preference number: 6 (lower is better)
Translates to: PSLAALIWSHVSPRA*AKWSSTEPVMDTEL
Trigger: CAACTCCGTGTCCATCACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS TCA 72 bp AGACAGACATTGTTTTCCAGGCCCCGCTCGCCCGGATaGATCACCTCCCGGCCACTGCTTCCCAGGCGTCAT +
Preference number: 6 (lower is better)
Translates to: RQTLFSRPRSPG*ITSRPLLPRRH
Trigger: ATGACGCCTGGGAAGCAGTGGCCGGGAGGTGATTCATCCGGGCGAGCGGGGCCTGGAAAACAATGTCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS CCA 72 bp GGGCTGCTGGATGCTCCGTCCTTGGCCGCTTTGATCTaGAGCCACGTGTCACCCAGAGCTTTGGCAAAGTGG +
Preference number: 6 (lower is better)
Translates to: GLLDAPSLAALI*SHVSPRALAKW
Trigger: CCACTTTGCCAAAGCTCTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGGAGCATCCAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS CCA 72 bp ATGCACCAGAGATGCTGCCCTGGACAAAACATCCAATaGCGTCTCCATTCCTGGTTGGAGCCGCCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: MHQRCCPGQNIQ*RLHSWLEPPGG
Trigger: GCCGCCGGGCGGCTCCAACCAGGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417466.5
ENST00000418000.5
CDS CAA 72 bp CTCCGACGCCGCTGGGTTTCCTCCCATTACAGCATGTaGCACTCCAGCGCTGCACTTCACACTCGCACACGC +
Preference number: 6 (lower is better)
Translates to: LRRRWVSSHYSM*HSSAALHTRTR
Trigger: GCGTGTGCGAGTGTGAAGTGCAGCGCTGGAGTGCAACATGCTGTAATGGGAGGAAACCCAGCGGCGTCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000414047.1
ENST00000426568.5
ENST00000623028.1
CDS CAA 72 bp GCCGCTTTGATCTGGAGCCACGTGTCACCCAGAGCTTaGGCAAAGTGGTCGTCCACGGAGCCCGTGATGGAC +
Preference number: 6 (lower is better)
Translates to: AALIWSHVSPRA*AKWSSTEPVMD
Trigger: GTCCATCACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCTGGGTGACACGTGGCTCCAGATCAAAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS CAA 72 bp GACTCAGGGCTGCTGGATGCTCCGTCCTTGGCCGCTTaGATCTGGAGCCACGTGTCACCCAGAGCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: DSGLLDAPSLAA*IWSHVSPRALA
Trigger: TGCCAAAGCTCTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGGAGCATCCAGCAGCCCTGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS TCA 72 bp ACTCAGGGCTGCTGGATGCTCCGTCCTTGGCCGCTTTaGTCTGGAGCCACGTGTCACCCAGAGCTTTGGCAA +
Preference number: 6 (lower is better)
Translates to: TQGCWMLRPWPL*SGATCHPELWQ
Trigger: TTGCCAAAGCTCTGGGTGACACGTGGCTCCAGATCAAAGCGGCCAAGGACGGAGCATCCAGCAGCCCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS TCA 72 bp AGGCCACCGGCAGGGTCTGTATTCTGGGTTCTCCCCTaGGAGCAGCTTCGCCTTCGTAGCACAGAATGCCGA +
Preference number: 6 (lower is better)
Translates to: RPPAGSVFWVLP*EQLRLRSTECR
Trigger: TCGGCATTCTGTGCTACGAAGGCGAAGCTGCTCTCAGGGGAGAACCCAGAATACAGACCCTGCCGGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS CCA 72 bp ATCTGGAGCCACGTGTCACCCAGAGCTTTGGCAAAGTaGTCGTCCACGGAGCCCGTGATGGACACGGAGTTG +
Preference number: 6 (lower is better)
Translates to: IWSHVSPRALAK*SSTEPVMDTEL
Trigger: CAACTCCGTGTCCATCACGGGCTCCGTGGACGACCACTTTGCCAAAGCTCTGGGTGACACGTGGCTCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000424529.6
ENST00000426568.5
ENST00000430365.7
ENST00000451674.6
CDS CAA 72 bp CCCCTTCAGCCGCTCACACACCAGTGTTTGCTGTGTTaGGCAAACTCCTGGCGTCCACAACCCGGACTGCTC +
Preference number: 6 (lower is better)
Translates to: PLQPLTHQCLLC*ANSWRPQPGLL
Trigger: GAGCAGTCCGGGTTGTGGACGCCAGGAGTTTGCCAAACACAGCAAACACTGGTGTGTGAGCGGCTGAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS CAA 72 bp CGGCTCCGCTCCCGGGGGTCTCTGCGGCAGTCTCCATaGGCAGTCTTGTTCATTTCCAGCTCATTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: RLRSRGSLRQSP*AVLFISSSFSW
Trigger: CCAGGAAAATGAGCTGGAAATGAACAAGACTGCCAATGGAGACTGCCGCAGAGACCCCCGGGAGCGGAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424529.6
CDS GCA 72 bp CATTGCAATGCGAGCCGGCAGATAAAAGCCGTGACGTaGTGTCTGCCCAAGCGCAAGGATCGCCTGCAATCC +
Preference number: 6 (lower is better)
Translates to: HCNASRQIKAVT*CLPKRKDRLQS
Trigger: GGATTGCAGGCGATCCTTGCGCTTGGGCAGACAGCACGTCACGGCTTTTATCTGCCGGCTCGCATTGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437722.1
CDS CCA 72 bp CCCTTCAGCCGCTCACACACCAGTGTTTGCTGTGTTTaGCAAACTCCTGGCGTCCACAACCCGGACTGCTCT +
Preference number: 6 (lower is better)
Translates to: PFSRSHTSVCCV*QTPGVHNPDCS
Trigger: AGAGCAGTCCGGGTTGTGGACGCCAGGAGTTTGCCAAACACAGCAAACACTGGTGTGTGAGCGGCTGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273038.7
CDS TCA 72 bp AGGCCACCGGCAGGGTCTGTATTCTGGGTTCTCCCCTaGGAGCAGCTTCGCGTTTTTCGTCATCAGCATGCA +
Preference number: 6 (lower is better)
Translates to: RPPAGSVFWVLP*EQLRVFRHQHA
Trigger: TGCATGCTGATGACGAAAAACGCGAAGCTGCTCTCAGGGGAGAACCCAGAATACAGACCCTGCCGGTGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000417206.6
ENST00000418000.5
ENST00000419541.4
ENST00000445411.5
ENST00000623028.1
CDS TCA 72 bp AGGCCACCGGCAGGGTCTGTATTCTGGGTTCTCCCCTaGGAGCAGCTTCGCCTTCTATTCTTGGTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: RPPAGSVFWVLP*EQLRLLFLVLH
Trigger: ATGGAGGACCAAGAATAGAAGGCGAAGCTGCTCTCAGGGGAGAACCCAGAATACAGACCCTGCCGGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424709.5
CDS CAA 72 bp CGGCTCCGCTCCCGGGGGTCTCTGCGGCAGTCTCCATaGGCAGTCTTGTTCCTCACTTTAATCATTGCCAAA +
Preference number: 6 (lower is better)
Translates to: RLRSRGSLRQSP*AVLFLTLIIAK
Trigger: TTTGGCAATGATTAAAGTGAGGAACAAGACTGCCAATGGAGACTGCCGCAGAGACCCCCGGGAGCGGAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451674.6
CDS CCA 72 bp ATGCACCAGAGATGCTGCCCTGGACAAAACATCCAATaGCGTCTCCATTCCTGGTTGGAGCACGCACACGCA +
Preference number: 6 (lower is better)
Translates to: MHQRCCPGQNIQ*RLHSWLEHAHA
Trigger: TGCGTGTGCGTGCTCCAACCAGGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417206.6
CDS CCA 72 bp TTCTCCCCTGAGAGCAGCTTCGCCATGGTGCAGACCTaGATGTCTCCAACTTTTGAGTGCACAGGACTCAGG +
Preference number: 6 (lower is better)
Translates to: FSPESSFAMVQT*MSPTFECTGLR
Trigger: CCTGAGTCCTGTGCACTCAAAAGTTGGAGACATCCAGGTCTGCACCATGGCGAAGCTGCTCTCAGGGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417466.5
ENST00000426568.5
CDS CAA 90 bp GCCAAAGAGCATGAAGACAGCCCAGCGTCCTCCCACAAGAAAGCCTaGGGCCTCACAAACTTGGCAAGCAGTCTCAGGCACAAAACTGGA +
Preference number: 6 (lower is better)
Translates to: AKEHEDSPASSHKKA*GLTNLASSLRHKTG
Trigger: TCCAGTTTTGTGCCTGAGACTGCTTGCCAAGTTTGTGAGGCCCAAGGCTTTCTTGTGGGAGGACGCTGGGCTGTCTTCATGCTCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451674.6
CDS GCA 72 bp ATTCTGGGTTCTCCCCTGAGAGCAGCTTCGCCATGGTaGAGACCTGGATGTCTCCAACTTTTGAGTGCACAG +
Preference number: 6 (lower is better)
Translates to: ILGSPLRAASPW*RPGCLQLLSAQ
Trigger: CTGTGCACTCAAAAGTTGGAGACATCCAGGTCTGCACCATGGCGAAGCTGCTCTCAGGGGAGAACCCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417466.5
ENST00000426568.5
CDS CCA 72 bp ATGCACCAGAGATGCTGCCCTGGACAAAACATCCAATaGCGTCTCCATTCCTGGTTGGAGCCTGAAGGGACA +
Preference number: 6 (lower is better)
Translates to: MHQRCCPGQNIQ*RLHSWLEPEGT
Trigger: TGTCCCTTCAGGCTCCAACCAGGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273038.7
ENST00000426568.5
ENST00000463387.1
ENST00000623028.1
CDS CCA 72 bp AGATGGGGGTTGAAGATGCGACTCATTTTGGAGACGTaGTCGTTGTCACAGTCTAGGTCCTCGTCACCTGGC +
Preference number: 6 (lower is better)
Translates to: RWGLKMRLILET*SLSQSRSSSPG
Trigger: GCCAGGTGACGAGGACCTAGACTGTGACAACGACCACGTCTCCAAAATGAGTCGCATCTTCAACCCCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000437722.1
ENST00000445411.5
ENST00000458499.5
CDS CAA 72 bp GGGTTGAAGATGCGACTCATTTTGGAGACGTGGTCGTaGTCACAGTCTAGGTCCTCGTCACCTGGCTCCATG +
Preference number: 6 (lower is better)
Translates to: GLKMRLILETWS*SQSRSSSPGSM
Trigger: CATGGAGCCAGGTGACGAGGACCTAGACTGTGACAACGACCACGTCTCCAAAATGAGTCGCATCTTCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000437722.1
ENST00000445411.5
ENST00000458499.5
CDS CAA 90 bp CCATTGGCAGTCTTGTTCAGATGGGGGTTGAAGATGCGACTCATTTaGGAGACGTGGTCGTTGTCACAGTCTAGGTCCTCGTCACCTGGC +
Preference number: 6 (lower is better)
Translates to: PLAVLFRWGLKMRLI*ETWSLSQSRSSSPG
Trigger: GCCAGGTGACGAGGACCTAGACTGTGACAACGACCACGTCTCCAAAATGAGTCGCATCTTCAACCCCCATCTGAACAAGACTGCCAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000437722.1
ENST00000445411.5
ENST00000458499.5
CDS CCA 72 bp ATGCACCAGAGATGCTGCCCTGGACAAAACATCCAATaGCGTCTCCATTCCTGGTTGGAGCCAGTGTTTGCT +
Preference number: 6 (lower is better)
Translates to: MHQRCCPGQNIQ*RLHSWLEPVFA
Trigger: AGCAAACACTGGCTCCAACCAGGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445411.5
CDS CAA 90 bp TTCAGATGGGGGTTGAAGATGCGACTCATTTTGGAGACGTGGTCGTaGTCACAGTCTAGGTCCTCGTCACCTGGCTCCATGCTGAACTTC +
Preference number: 6 (lower is better)
Translates to: FRWGLKMRLILETWS*SQSRSSSPGSMLNF
Trigger: GAAGTTCAGCATGGAGCCAGGTGACGAGGACCTAGACTGTGACAACGACCACGTCTCCAAAATGAGTCGCATCTTCAACCCCCATCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000437722.1
ENST00000445411.5
ENST00000458499.5
CDS GCA 72 bp TTCGCGTTTTTCGTCATCAGCATGCACCAGAGATGCTaGCCTGGACAAAACATCCAATGGCGTCTCCATTCC +
Preference number: 6 (lower is better)
Translates to: FAFFVISMHQRC*PGQNIQWRLHS
Trigger: GGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACGCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000417206.6
ENST00000418000.5
ENST00000419541.4
ENST00000445411.5
ENST00000623028.1
CDS GCA 72 bp AGCTTCGCGTTTTTCGTCATCAGCATGCACCAGAGATaGTGCCCTGGACAAAACATCCAATGGCGTCTCCAT +
Preference number: 6 (lower is better)
Translates to: SFAFFVISMHQR*CPGQNIQWRLH
Trigger: ATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACGCGAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273038.7
ENST00000417206.6
ENST00000418000.5
ENST00000419541.4
ENST00000445411.5
ENST00000623028.1
CDS GCA 72 bp AGACCGTTTTTCGTCATCAGCATGCACCAGAGATGCTaGCCTGGACAAAACATCCAATGGCGTCTCCATTCC +
Preference number: 6 (lower is better)
Translates to: RPFFVISMHQRC*PGQNIQWRLHS
Trigger: GGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417466.5
CDS GCA 72 bp GCAAGACCGTTTTTCGTCATCAGCATGCACCAGAGATaGTGCCCTGGACAAAACATCCAATGGCGTCTCCAT +
Preference number: 6 (lower is better)
Translates to: ARPFFVISMHQR*CPGQNIQWRLH
Trigger: ATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACGGTCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417466.5
CDS GCA 72 bp TCTCAGTCATCAGTTCCGCAGCGAGGACTACGATTCTaGATTTCTAACAAGTTCCCAGGTGACGCTGTGGTC +
Preference number: 6 (lower is better)
Translates to: SQSSVPQRGLRF*ISNKFPGDAVV
Trigger: GACCACAGCGTCACCTGGGAACTTGTTAGAAATGCAGAATCGTAGTCCTCGCTGCGGAACTGATGACTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417466.5
CDS CCA 72 bp ATGCACCAGAGATGCTGCCCTGGACAAAACATCCAATaGCGTCTCCATTCCTGGTTGGAGCCTTGTCTAGAT +
Preference number: 6 (lower is better)
Translates to: MHQRCCPGQNIQ*RLHSWLEPCLD
Trigger: ATCTAGACAAGGCTCCAACCAGGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419541.4
CDS CCA 72 bp GACAGGTCCGTTCAGTTATGTGCCTTTATGCATCTTTaGGGCCCCTCCCTAGATGGCCTTAACCCAACACTT +
Preference number: 6 (lower is better)
Translates to: DRSVQLCAFMHL*GPSLDGLNPTL
Trigger: AAGTGTTGGGTTAAGGCCATCTAGGGAGGGGCCCCAAAGATGCATAAAGGCACATAACTGAACGGACCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413604.5
CDS CCA 72 bp CATCTGATCATATCAAGGAACAGCACGGTGTCTCACTaGATCTTAGCCCTTCGAAGAGCCGGTGTGGGGTTA +
Preference number: 6 (lower is better)
Translates to: HLIISRNSTVSH*ILALRRAGVGL
Trigger: TAACCCCACACCGGCTCTTCGAAGGGCTAAGATCCAGTGAGACACCGTGCTGTTCCTTGATATGATCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623028.1
CDS CAA 72 bp GTCTTGTTCAGATGGGGGTTGAAGATGCGACTCATTTaGGAGACGTGGTCGTTGTCACAGTCTAGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: VLFRWGLKMRLI*ETWSLSQSRSS
Trigger: CGAGGACCTAGACTGTGACAACGACCACGTCTCCAAAATGAGTCGCATCTTCAACCCCCATCTGAACAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000273038.7
ENST00000413604.5
ENST00000417206.6
ENST00000417466.5
ENST00000418000.5
ENST00000419541.4
ENST00000424709.5
ENST00000426568.5
ENST00000430365.7
ENST00000437722.1
ENST00000445411.5
ENST00000458499.5
CDS CAA 90 bp CCCATCGACTGCACAGCTTCTCAGTTTCCCTTTCGCTCTGTTTCTTaGTGCGTCCTCCCCAATCTAGTTCTTTCTCATCTCTCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: PIDCTASQFPFRSVS*CVLPNLVLSHLSAK
Trigger: CTTGGCAGAGAGATGAGAAAGAACTAGATTGGGGAGGACGCACAAAGAAACAGAGCGAAAGGGAAACTGAGAAGCTGTGCAGTCGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414047.1
CDS GCA 72 bp GCCTCTGCAATCAGACAACGCCTCATCCTAAGACTGTaGAGCCTCACACAAGGCTTACAGCAAAGGAAAAGA +
Preference number: 6 (lower is better)
Translates to: ASAIRQRLILRL*SLTQGLQQRKR
Trigger: TCTTTTCCTTTGCTGTAAGCCTTGTGTGAGGCTGCACAGTCTTAGGATGAGGCGTTGTCTGATTGCAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413604.5
CDS GCA 72 bp TGGGCAACAGAGCAAGACCGTTTTTCGTCATCAGCATaGACCAGAGATGCTGCCCTGGACAAAACATCCAAT +
Preference number: 6 (lower is better)
Translates to: WATEQDRFSSSA*TRDAALDKTSN
Trigger: ATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACGGTCTTGCTCTGTTGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417466.5
CDS GCA 72 bp CATCTGTTTTTCGTCATCAGCATGCACCAGAGATGCTaGCCTGGACAAAACATCCAATGGCGTCTCCATTCC +
Preference number: 6 (lower is better)
Translates to: HLFFVISMHQRC*PGQNIQWRLHS
Trigger: GGAATGGAGACGCCATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463387.1
CDS CAA 72 bp GCTTCGCCATGGTGCAGACCTGGATGTCTCCAACTTTaGAGTGCACAGGACTCAGGGATTTTGTCAAAATGC +
Preference number: 6 (lower is better)
Translates to: ASPWCRPGCLQL*SAQDSGILSKC
Trigger: GCATTTTGACAAAATCCCTGAGTCCTGTGCACTCAAAAGTTGGAGACATCCAGGTCTGCACCATGGCGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417466.5
ENST00000426568.5
CDS GCA 72 bp AACAAGTTCCCAGGTGACGGTTTTTCGTCATCAGCATaGACCAGAGATGCTGCCCTGGACAAAACATCCAAT +
Preference number: 6 (lower is better)
Translates to: NKFPGDGFSSSA*TRDAALDKTSN
Trigger: ATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACCGTCACCTGGGAACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426568.5
CDS GCA 72 bp TGGGCAACACAGCATGATCGTTTTTCGTCATCAGCATaGACCAGAGATGCTGCCCTGGACAAAACATCCAAT +
Preference number: 6 (lower is better)
Translates to: WATQHDRFSSSA*TRDAALDKTSN
Trigger: ATTGGATGTTTTGTCCAGGGCAGCATCTCTGGTGCATGCTGATGACGAAAAACGATCATGCTGTGTTGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638314.1
CDS CAA 72 bp TGGGGAGAAGACACCGTGAAGTCAATCTCCTTCAAATaGTTCAACTTGTGGCTAGCCCCATTCTGGCTCACT +
Preference number: 6 (lower is better)
Translates to: WGEDTVKSISFK*FNLWLAPFWLT
Trigger: AGTGAGCCAGAATGGGGCTAGCCACAAGTTGAACAATTTGAAGGAGATTGACTTCACGGTGTCTTCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437722.1
CDS CAA 72 bp TGCACAGCTTCTCAGTTTCCCTTTCGCTCTGTTTCTTaGTGCGTCCTCCCCAATCTAGTTCTTTCTCATCTC +
Preference number: 6 (lower is better)
Translates to: CTASQFPFRSVS*CVLPNLVLSHL
Trigger: GAGATGAGAAAGAACTAGATTGGGGAGGACGCACAAAGAAACAGAGCGAAAGGGAAACTGAGAAGCTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414047.1
CDS TCA 72 bp AAGTCCTTACAAGTCCTTCCTGGAAATGGAAAAGAGTaGAAAAGAGAAACGCGCAGCCCGTTTCCTAGGACA +
Preference number: 6 (lower is better)
Translates to: KSLQVLPGNGKE*KRETRSPFPRT
Trigger: TGTCCTAGGAAACGGGCTGCGCGTTTCTCTTTTTCACTCTTTTCCATTTCCAGGAAGGACTTGTAAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS TCA 72 bp GGTAGACGGTGTATGTACTGTATCCCCGATCGAGTATaGAAACAGCGTTTCAGAAGTCCTTACAAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: GRRCMYCIPDRV*KQRFRSPYKSF
Trigger: GAAGGACTTGTAAGGACTTCTGAAACGCTGTTTTCATACTCGATCGGGGATACAGTACATACACCGTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS CCA 72 bp GACACTGGAGTCATTCATAAGGAGACAACACTTGCCTaGTGTGAAGAACGAGTAGCTGCAAGACAAAATCCT +
Preference number: 6 (lower is better)
Translates to: DTGVIHKETTLA*CEERVAARQNP
Trigger: AGGATTTTGTCTTGCAGCTACTCGTTCTTCACACCAGGCAAGTGTTGTCTCCTTATGAATGACTCCAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480288.1
CDS CCA 72 bp TTAAGTTTCAAAAATCAATTGTTGCTGAGTAGCTCCTaGCTCTTCAACTTCACAAAGGCAGAGGCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: LSFKNQLLLSSS*LFNFTKAEAQP
Trigger: AGGCTGGGCCTCTGCCTTTGTGAAGTTGAAGAGCCAGGAGCTACTCAGCAACAATTGATTTTTGAAACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430365.7
CDS CCA 72 bp CAGCTTCGCTTGTATCACCAACTCGCTGAGTATCCTTaGGCTAGTCAGGCAATTTCAATGCTTATCTTTAGT +
Preference number: 6 (lower is better)
Translates to: QLRLYHQLAEYP*ASQAISMLIFS
Trigger: ACTAAAGATAAGCATTGAAATTGCCTGACTAGCCCAAGGATACTCAGCGAGTTGGTGATACAAGCGAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480288.1
CDS GCA 72 bp TCGCTGAGTATCCTTGGGCTAGTCAGGCAATTTCAATaGTTATCTTTAGTCAAAAGACACTGGAGTCATTCA +
Preference number: 6 (lower is better)
Translates to: SLSILGLVRQFQ*LSLVKRHWSHS
Trigger: TGAATGACTCCAGTGTCTTTTGACTAAAGATAAGCATTGAAATTGCCTGACTAGCCCAAGGATACTCAGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480288.1