Pregenerated sensors for VDAC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000165637

Ensembl transcript IDs: ENST00000313132.8, ENST00000413289.1, ENST00000447677.5, ENST00000460044.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GCGGGAAGAGGGGAATCTGCGGGAGGGACAAGAAGTGCGGTAAGCTaGGGTCAAAGGGCCAAAGGGAGATCCCGGGCAGAGAGGGGCGAG	+
Preference number: 5 (lower is better) Translates to: AGRGESAGGTRSAVS*GQRAKGRSRAERGE Trigger: CTCGCCCCTCTCTGCCCGGGATCTCCCTTTGGCCCTTTGACCCCAGCTTACCGCACTTCTTGTCCCTCCCGCAGATTCCCCTCTTCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447677.5
CDS CCA 72 bp	GGGGAATCTGCGGGAGGGACAAGAAGTGCGGTAAGCTaGGGTCAAAGGGCCAAAGGGAGATCCCGGGCAGAG	+
Preference number: 6 (lower is better) Translates to: GESAGGTRSAVS*GQRAKGRSRAE Trigger: CTCTGCCCGGGATCTCCCTTTGGCCCTTTGACCCCAGCTTACCGCACTTCTTGTCCCTCCCGCAGATTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447677.5
CDS GCA 72 bp	CGCGGGAAGAGGGGAATCTGCGGGAGGGACAAGAAGTaGGGTAAGCTGGGGTCAAAGGGCCAAAGGGAGATC	+
Preference number: 6 (lower is better) Translates to: RGKRGICGRDKK*GKLGSKGQREI Trigger: GATCTCCCTTTGGCCCTTTGACCCCAGCTTACCGCACTTCTTGTCCCTCCCGCAGATTCCCCTCTTCCCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447677.5
CDS TCA 72 bp	CTCTCACAAGAGGGACTGCTACTTCCTCTAGAAAAGTaGTTGATCCGATCGACGCGCGCAAGTCTGTCCGTG	+
Preference number: 6 (lower is better) Translates to: LSQEGLLLPLEK*LIRSTRASLSV Trigger: CACGGACAGACTTGCGCGCGTCGATCGGATCAATCACTTTTCTAGAGGAAGTAGCAGTCCCTCTTGTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000313132.8
CDS TCA 72 bp	CTCTCACAAGAGGGACTGCTACTTCCTCTAGAAAAGTaGTTGATCCGATCCTCCAAAGGCAGAATCCCCAAT	+
Preference number: 6 (lower is better) Translates to: LSQEGLLLPLEK*LIRSSKGRIPN Trigger: ATTGGGGATTCTGCCTTTGGAGGATCGGATCAATCACTTTTCTAGAGGAAGTAGCAGTCCCTCTTGTGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413289.1
CDS CCA 72 bp	AAATTCTCAGTAGGACACAATACTCTTGATAGCCACTaGAATGTATCCAAAGACCCCAAACTGTCCATACAG	+
Preference number: 6 (lower is better) Translates to: KFSVGHNTLDSH*NVSKDPKLSIQ Trigger: CTGTATGGACAGTTTGGGGTCTTTGGATACATTCCAGTGGCTATCAAGAGTATTGTGTCCTACTGAGAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460044.1

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