RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VCL (Homo sapiens)

Ensembl gene IDs: ENSG00000035403

Ensembl transcript IDs: ENST00000211998.10, ENST00000372755.7, ENST00000461383.1, ENST00000472585.1, ENST00000478896.2, ENST00000623461.3, ENST00000624354.3

Found 976 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTGGTCTGCAGGTTCTaGAGGGCCGTGGCCACCTGTTTGGCCAAGGCTCGAGCCTCTGGA +
Preference number: 1 (lower is better)
Translates to: GLLLATARLVLVCRF*RAVATCLAKARASG
Trigger: TCCAGAGGCTCGAGCCTTGGCCAAACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp GCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTGGTCTaGAGGTTCTGCAGGGCCGTGGCCACCTGTTTGGCCAAGGCTCGA +
Preference number: 1 (lower is better)
Translates to: ALAGLLLATARLVLV*RFCRAVATCLAKAR
Trigger: TCGAGCCTTGGCCAAACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp GCAGTGACTAAGCATGGAGTGCCGGGAGTGGCCCTGCTGGGAAGATaGCAGGGCCACACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGA +
Preference number: 1 (lower is better)
Translates to: AVTKHGVPGVALLGR*QGHTLATLPFQWQR
Trigger: TCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGTGTGGCCCTGCCATCTTCCCAGCAGGGCCACTCCCGGCACTCCATGCTTAGTCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CCA 90 bp CAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTaGTCTGCAGGTTCTGCAGGGCCGTGGCCACCTGTTTGGCCAAGG +
Preference number: 1 (lower is better)
Translates to: QLLWPVCCWPQPGWF*SAGSAGPWPPVWPR
Trigger: CCTTGGCCAAACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp GGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTaGTTTTGGTCTGCAGGTTCTGCAGGGCCGTGGCCACCTGTTTGG +
Preference number: 1 (lower is better)
Translates to: GVQLLWPVCCWPQPG*FWSAGSAGPWPPVW
Trigger: CCAAACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp TGGCCACAGCCCGGTTGGTTTTGGTCTGCAGGTTCTGCAGGGCCGTaGCCACCTGTTTGGCCAAGGCTCGAGCCTCTGGAGAATCTCCTT +
Preference number: 1 (lower is better)
Translates to: WPQPGWFWSAGSAGP*PPVWPRLEPLENLL
Trigger: AAGGAGATTCTCCAGAGGCTCGAGCCTTGGCCAAACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp CTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATaGGATGGCTACCTTGGCGGGCTGAGGCAGGATATGGGACGGGAA +
Preference number: 1 (lower is better)
Translates to: LCPSSGREHQDTVCS*DGYLGGLRQDMGRE
Trigger: TTCCCGTCCCATATCCTGCCTCAGCCCGCCAAGGTAGCCATCCCATGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CCA 90 bp CAATCTTGCCCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTaGCCACAGCCCGGTTGGTTTTGGTCTGCAGGTTCTGCAGGGCCG +
Preference number: 1 (lower is better)
Translates to: QSCPQGVQLLWPVCC*PQPGWFWSAGSAGP
Trigger: CGGCCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 90 bp GAGTCACCTCATCTGAGGCCTTGGCGATGTCCTTGGCACACTGAATaGGTGCCCGCTTGGTACCACTGCCCCCTCTTACCAGCCGAGACA +
Preference number: 1 (lower is better)
Translates to: ESPHLRPWRCPWHTE*VPAWYHCPLLPAET
Trigger: TGTCTCGGCTGGTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATCGCCAAGGCCTCAGATGAGGTGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp CCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATGGGATaGCTACCTTGGCGGGCTGAGGCAGGATATGGGACGGGAAGTTTC +
Preference number: 1 (lower is better)
Translates to: PFQWQRAPGHSVFMG*LPWRAEAGYGTGSF
Trigger: GAAACTTCCCGTCCCATATCCTGCCTCAGCCCGCCAAGGTAGCCATCCCATGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CCA 90 bp GGTTGGTTTTGGTCTGCAGGTTCTGCAGGGCCGTGGCCACCTGTTTaGCCAAGGCTCGAGCCTCTGGAGAATCTCCTTTCCCCTGTCTTC +
Preference number: 1 (lower is better)
Translates to: GWFWSAGSAGPWPPV*PRLEPLENLLSPVF
Trigger: GAAGACAGGGGAAAGGAGATTCTCCAGAGGCTCGAGCCTTGGCCAAACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAAAACCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp CCCGGCCTTCTGCTCAGGGAACTCTTCATCCTTTTCCTCTGGTGGTaGAGGCCTAGGTGGAGGGACCTCACCTTCAGGCAGAGGTGGTTT +
Preference number: 1 (lower is better)
Translates to: PGLLLRELFILFLWW*RPRWRDLTFRQRWF
Trigger: AAACCACCTCTGCCTGAAGGTGAGGTCCCTCCACCTAGGCCTCCACCACCAGAGGAAAAGGATGAAGAGTTCCCTGAGCAGAAGGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp CTTAGCCACCAGCAGGATCCGGTTGGCCCGACGAGCAATACTGGTTaGCCCAGCAACCAGCATCTGAGGCTGAATGTTGGCCATAGCTAC +
Preference number: 1 (lower is better)
Translates to: LSHQQDPVGPTSNTG*PSNQHLRLNVGHSY
Trigger: GTAGCTATGGCCAACATTCAGCCTCAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCCAACCGGATCCTGCTGGTGGCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp TGGCAGAGAGCACCAGGACACAGTGTGTTCATGGGATGGCTACCTTaGCGGGCTGAGGCAGGATATGGGACGGGAAGTTTCCCTAGCACA +
Preference number: 1 (lower is better)
Translates to: WQRAPGHSVFMGWLP*RAEAGYGTGSFPST
Trigger: TGTGCTAGGGAAACTTCCCGTCCCATATCCTGCCTCAGCCCGCCAAGGTAGCCATCCCATGAACACACTGTGTCCTGGTGCTCTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CCA 90 bp GCATCCCCTGGGGAGGCACTAGGGTCACGGAGCCAACCTTTGGCCTaGTTCAGTTTGGAGTCTATGGAGGCCAATGCTCTCTTCATGGCT +
Preference number: 1 (lower is better)
Translates to: ASPGEALGSRSQPLA*FSLESMEANALFMA
Trigger: AGCCATGAAGAGAGCATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGACCCTAGTGCCTCCCCAGGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp ACCGCTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTaGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTGGTCTGCA +
Preference number: 1 (lower is better)
Translates to: TAVLAQSCPQGVQLL*PVCCWPQPGWFWSA
Trigger: TGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp CTCAGGGAACTCTTCATCCTTTTCCTCTGGTGGTGGAGGCCTAGGTaGAGGGACCTCACCTTCAGGCAGAGGTGGTTTGGGAGGAGCAAG +
Preference number: 1 (lower is better)
Translates to: LRELFILFLWWWRPR*RDLTFRQRWFGRSK
Trigger: CTTGCTCCTCCCAAACCACCTCTGCCTGAAGGTGAGGTCCCTCCACCTAGGCCTCCACCACCAGAGGAAAAGGATGAAGAGTTCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp GCGGCTGGGATGCCCGGCTTGCTGGACCATTTGCGAGCTTCATCATaGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCACCTCC +
Preference number: 1 (lower is better)
Translates to: AAGMPGLLDHLRASS*SCLAAIIIGWLITS
Trigger: GGAGGTGATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCGGGCATCCCAGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp AATCCACCGCTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTaGTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTGGT +
Preference number: 1 (lower is better)
Translates to: NPPLCLLNLALKVYS*FGRSAVGHSPVGFG
Trigger: ACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 90 bp GAGACCACCTGGGGTGTGAGTTCTCGGGCCGTCTTCACTGAGGCCTaGATGCCTTCCACTGTTGATTTATTAGCAGTACCAACCGCAGCC +
Preference number: 1 (lower is better)
Translates to: ETTWGVSSRAVFTEA*MPSTVDLLAVPTAA
Trigger: GGCTGCGGTTGGTACTGCTAATAAATCAACAGTGGAAGGCATTCAGGCCTCAGTGAAGACGGCCCGAGAACTCACACCCCAGGTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp ACCGACTCCACGGTCATCCACTGTGGGATTATCAATCCACCGCTGTaGTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGGCCGG +
Preference number: 1 (lower is better)
Translates to: TDSTVIHCGIINPPL*LLNLALKVYSCFGR
Trigger: CCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATGACCGTGGAGTCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp CTGGCAGCCATCATCATTGGCTGGTTAATCACCTCCCCGGCCTTCTaGTCAGGGAACTCTTCATCCTTTTCCTCTGGTGGTGGAGGCCTA +
Preference number: 1 (lower is better)
Translates to: LAAIIIGWLITSPAF*SGNSSSFSSGGGGL
Trigger: TAGGCCTCCACCACCAGAGGAAAAGGATGAAGAGTTCCCTGAGCAGAAGGCCGGGGAGGTGATTAACCAGCCAATGATGATGGCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 90 bp GAAGGCTTCTCTGACCTTGGCCACAGCTCCCAGGATCCGATATCCTaGGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGAAATGTTTCC +
Preference number: 1 (lower is better)
Translates to: EGFSDLGHSSQDPIS*VQEALLQSRVGNVS
Trigger: GGAAACATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCGGATCCTGGGAGCTGTGGCCAAGGTCAGAGAAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp GAGCCAACCTTTGGCCTGGTTCAGTTTGGAGTCTATGGAGGCCAATaGTCTCTTCATGGCTTCAGTGTCCTTGCTGGCCCAGGCATCTTC +
Preference number: 1 (lower is better)
Translates to: EPTFGLVQFGVYGGQ*SLHGFSVLAGPGIF
Trigger: GAAGATGCCTGGGCCAGCAAGGACACTGAAGCCATGAAGAGAGCATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp CATCCACTGTGGGATTATCAATCCACCGCTGTGCTTGCTCAATCTTaGCCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCA +
Preference number: 1 (lower is better)
Translates to: HPLWDYQSTAVLAQS*PQGVQLLWPVCCWP
Trigger: TGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp ACTCCACGGTCATCCACTGTGGGATTATCAATCCACCGCTGTGCTTaGTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGGCCGGTCTG +
Preference number: 1 (lower is better)
Translates to: TPRSSTVGLSIHRCA*SILPSRCTAALAGL
Trigger: CAGACCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATGACCGTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp ATCAAATACCTCTTCCCTGTTAGGCGCATCAGGAGGCGCCGTGGCTaGCACTGCCAACAGCTTGATGGGAGTTGTGGTATCGCTGAAAAC +
Preference number: 1 (lower is better)
Translates to: IKYLFPVRRIRRRRG*HCQQLDGSCGIAEN
Trigger: GTTTTCAGCGATACCACAACTCCCATCAAGCTGTTGGCAGTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGGGAAGAGGTATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp TTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTGGCTaGTTAATCACCTCCCCGGCCTTCTGCTCAGGGAACTCTTCATCC +
Preference number: 1 (lower is better)
Translates to: LRASSWSCLAAIIIG*LITSPAFCSGNSSS
Trigger: GGATGAAGAGTTCCCTGAGCAGAAGGCCGGGGAGGTGATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp CCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTaGCTGGTTAATCACCTCCCCGGCCTTCTGCTCAGGGAACTCTTC +
Preference number: 1 (lower is better)
Translates to: PFASFIMELSGSHHH*LVNHLPGLLLRELF
Trigger: GAAGAGTTCCCTGAGCAGAAGGCCGGGGAGGTGATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp GTCCGGCCCAGCATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTaGGTGCTTATGGTTGGGATTCGCTCACATACCTGTAAGAGGTTG +
Preference number: 1 (lower is better)
Translates to: VRPSMVAFTVDRILS*VLMVGIRSHTCKRL
Trigger: CAACCTCTTACAGGTATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCATGCTGGGCCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 90 bp TGTTGGTCCGGCCCAGCATGGTGGCCTTCACTGTGGACAGGATTTTaGGCTGGGTGCTTATGGTTGGGATTCGCTCACATACCTGTAAGA +
Preference number: 1 (lower is better)
Translates to: CWSGPAWWPSLWTGF*AGCLWLGFAHIPVR
Trigger: TCTTACAGGTATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCATGCTGGGCCGGACCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp CCAACCGCAGCCGCCTTCTCGGCCGTAGCACCAAGCTTTCCTGAATaGTTTTCAAAGTTAGCTGCCCTCTCATCAAATACCTCTTCCCTG +
Preference number: 1 (lower is better)
Translates to: PTAAAFSAVAPSFPE*FSKLAALSSNTSSL
Trigger: CAGGGAAGAGGTATTTGATGAGAGGGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCTACGGCCGAGAAGGCGGCTGCGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 90 bp TGGTCATGGCTTCCAGCTTGCGAGCTGCATTTTCCACTTTTGCTGTaGGCACATCCAGACCCTGAGATACCTGCTGAGCTTTCTGCATGG +
Preference number: 1 (lower is better)
Translates to: WSWLPACELHFPLLL*AHPDPEIPAELSAW
Trigger: CCATGCAGAAAGCTCAGCAGGTATCTCAGGGTCTGGATGTGCTCACAGCAAAAGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 90 bp TTCACGGTGTTCATCGAGTTCACCAACATCACTCGGTGCTCCTGGTaGGTGAGCTCCTGCTGTCTCTCGTCAATCATCTTGGCCATCTTA +
Preference number: 1 (lower is better)
Translates to: FTVFIEFTNITRCSW*VSSCCLSSIILAIL
Trigger: TAAGATGGCCAAGATGATTGACGAGAGACAGCAGGAGCTCACTCACCAGGAGCACCGAGTGATGTTGGTGAACTCGATGAACACCGTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 90 bp AGTACCAACCGCAGCCGCCTTCTCGGCCGTAGCACCAAGCTTTCCTaGATGGTTTTCAAAGTTAGCTGCCCTCTCATCAAATACCTCTTC +
Preference number: 1 (lower is better)
Translates to: STNRSRLLGRSTKLS*MVFKVSCPLIKYLF
Trigger: GAAGAGGTATTTGATGAGAGGGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCTACGGCCGAGAAGGCGGCTGCGGTTGGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp TCACATACCTGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTaGTTGGCAACCTCCTTGGCCAACCGAGTCACCTCATCTGAGGCC +
Preference number: 1 (lower is better)
Translates to: SHTCKRLVLIRLSVH*LATSLANRVTSSEA
Trigger: GGCCTCAGATGAGGTGACTCGGTTGGCCAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACAGGTATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp TTGGATCTGCAAGCCAGTTCTGAGCAGCATCGATCTTCTTTGCAATaGTCTGCTTTGAGTTGGTCATGGCTTCCAGCTTGCGAGCTGCAT +
Preference number: 1 (lower is better)
Translates to: LDLQASSEQHRSSLQ*SALSWSWLPACELH
Trigger: ATGCAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGAACTGGCTTGCAGATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp GGAGGCACAGCAATTTTCTTCTTAGTAACTGATTTGCCTGGGCCCTaGGTCTTGGGATTCTGGAAGAGTGAATGGGAGCCAAGGAAAGAG +
Preference number: 1 (lower is better)
Translates to: GGTAIFFLVTDLPGP*VLGFWKSEWEPRKE
Trigger: CTCTTTCCTTGGCTCCCATTCACTCTTCCAGAATCCCAAGACCCAGGGCCCAGGCAAATCAGTTACTAAGAAGAAAATTGCTGTGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR GCA 90 bp CATAATTCTGCTATTTTCCGAGCTTCAGCCAAAGCACCTCGAATCTaGTCTTCTCCTTCCGGTCCACCATTTGGATCTGCAAGCCAGTTC +
Preference number: 1 (lower is better)
Translates to: HNSAIFRASAKAPRI*SSPSGPPFGSASQF
Trigger: GAACTGGCTTGCAGATCCAAATGGTGGACCGGAAGGAGAAGAGCAGATTCGAGGTGCTTTGGCTGAAGCTCGGAAAATAGCAGAATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 90 bp AAGCCAGTTCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTaGGTTGGTCATGGCTTCCAGCTTGCGAGCTGCATTTTCCACTTT +
Preference number: 1 (lower is better)
Translates to: KPVLSSIDLLCNALL*VGHGFQLASCIFHF
Trigger: AAAGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGAACTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 90 bp AGCTTGATGGGAGTTGTGGTATCGCTGAAAACATCTGACACTTCCTaGGTCATGGCCTCCTGCATCCGAGCTTTTAGATCCTTTAAGGAG +
Preference number: 1 (lower is better)
Translates to: SLMGVVVSLKTSDTS*VMASCIRAFRSFKE
Trigger: CTCCTTAAAGGATCTAAAAGCTCGGATGCAGGAGGCCATGACTCAGGAAGTGTCAGATGTTTTCAGCGATACCACAACTCCCATCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp GATCAGTCATCTGCCCTAGCATTTTGCAAGTTCCCAGAATCTCCCTaGGTTCTTTGCCTGCACAGAGTTCACCAACTTTTCCAGCTTCAT +
Preference number: 1 (lower is better)
Translates to: DQSSALAFCKFPESP*VLCLHRVHQLFQLH
Trigger: ATGAAGCTGGAAAAGTTGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGATTCTGGGAACTTGCAAAATGCTAGGGCAGATGACTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 90 bp CTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTaGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGGC +
Preference number: 1 (lower is better)
Translates to: LSLCEVHGLETQSAY*DRGCTSVTVFENTG
Trigger: GCCTGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CCA 90 bp AGTTCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTTaGTCATGGCTTCCAGCTTGCGAGCTGCATTTTCCACTTTTGCTG +
Preference number: 1 (lower is better)
Translates to: SSEQHRSSLQCSALS*SWLPACELHFPLLL
Trigger: CAGCAAAAGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp TCTGCCCTAGCATTTTGCAAGTTCCCAGAATCTCCCTGCGTTCTTTaGCTGCACAGAGTTCACCAACTTTTCCAGCTTCATCTAAGATCT +
Preference number: 1 (lower is better)
Translates to: SALAFCKFPESPCVL*LHRVHQLFQLHLRS
Trigger: AGATCTTAGATGAAGCTGGAAAAGTTGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGATTCTGGGAACTTGCAAAATGCTAGGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 90 bp GAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATAGAGGGTaGACAAGTGTAACTGTGTTTGAGAATACAGGCTTTATACAGAAA +
Preference number: 1 (lower is better)
Translates to: EVHGLETQSAYWDRG*TSVTVFENTGFIQK
Trigger: TTTCTGTATAAAGCCTGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR GCA 90 bp CTTAGCAGTAATAAGTACCAAAAAGGAAACACTGCCCTCTCATTTTaGCTAGTAGGAACTTACTGTGGTGATAAGAAATATGAAACCCAT +
Preference number: 1 (lower is better)
Translates to: LSSNKYQKGNTALSF*LVGTYCGDKKYETH
Trigger: ATGGGTTTCATATTTCTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTTTTGGTACTTATTACTGCTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR GCA 90 bp ATTCTTTGTGTAAGTGACCAAATCTTCCATAGTCTCCACCACCTCTaGCACTGTAAGATATTCCAAAATTCCTTTGCAAACTCTAATAAT +
Preference number: 1 (lower is better)
Translates to: ILCVSDQIFHSLHHL*HCKIFQNSFANSNN
Trigger: ATTATTAGAGTTTGCAAAGGAATTTTGGAATATCTTACAGTGGCAGAGGTGGTGGAGACTATGGAAGATTTGGTCACTTACACAAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp CCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGGGTTCTGCAGGGCCGTaGCCACCTGTTTGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: PQGVQLLWPVCCWPQPGWGSAGP*PPVWPR
Trigger: CCTTGGCCAAACAGGTGGCCACGGCCCTGCAGAACC...CCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp ACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTaGGTCTGCAGGTTCTGCAGGGCCGTGGCCACCTGTTTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: TAALAGLLLATARLV*VCRFCRAVATCLAK
Trigger: CTTGGCCAAACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp TTAGTCGGAGTTGTTCAAGGTCTGGTGGAGGCGGCGGGAAGTCAGGCTCCTGAGCTGCATGGCCACCGGTaGGGATCCTTGTCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: LVGVVQGLVEAAGSQAPELHGHR*GSLSSG
Trigger: GCCAGAGGACAAGGATCCTCACCGGTGGCCATGCAG...CTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAACTCCGACTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp ATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCGACTGGCCACAGCCCGGTTaGTTTTGGTCTGCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: ISQTMPFGHKPPDGSLTDWPQPG*FWSAGS
Trigger: AGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCA...GTCGGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp CTCATCAAATACCTCTTCCCTGTTAGGCGCATCAGGAGGCGCCGTGGCTGCCACGGTGCTCCTGGTGAGTaGGCTCCTGCTGTCTCTCGT +
Preference number: 2 (lower is better)
Translates to: LIKYLFPVRRIRRRRGCHGAPGE*APAVSR
Trigger: ACGAGAGACAGCAGGAGCTCACTCACCAGGAGCACC...GTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGGGAAGAGGTATTTGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp ATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCGACCTGAAGCATCTGAGCTaGCTGGACAAGCTTGGTGCA +
Preference number: 2 (lower is better)
Translates to: ISQTMPFGHKPPDGSLTDLKHLS*LDKLGA
Trigger: TGCACCAAGCTTGTCCAGGCAGCTCAGATGCTTCAG...GTCGGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAGCTCCCAGCAACTCTaGGCAGCTCCTGGGACTCAG +
Preference number: 2 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFSSQQL*AAPGTQ
Trigger: CTGAGTCCCAGGAGCTGCCCAGAGTTGCTGGGAGCT...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp AGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGGCCAGGTCAGCCAGCTaGGCTGTCAGCTGGTCCACT +
Preference number: 2 (lower is better)
Translates to: SLTELGILGILHLPLSHQARSAS*AVSWST
Trigger: AGTGGACCAGCTGACAGCCCAGCTGGCTGACCTGGC...CTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp ACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGCAGGATGCAGCCGAGACCACCTaGGGTGTGAGTTCTCGGGCC +
Preference number: 2 (lower is better)
Translates to: TELGILGILHLPLSHQQDAAETT*GVSSRA
Trigger: GGCCCGAGAACTCACACCCCAGGTGGTCTCGGCTGC...ATCCTGCTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp TCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTaGGCCACAGCCCGGTTGGTTTTGGTCTGCAGGTTCTGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: SILPSRCTAALAGLL*ATARLVLVCRFCRA
Trigger: GGCCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp CACCGCTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTaGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTGGTCTGC +
Preference number: 2 (lower is better)
Translates to: HRCACSILPSRCTAA*AGLLLATARLVLVC
Trigger: GCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp TTGTTCAAGGTCTGGTGGAGGCGGCGGGAAGTCAGGCTCCTGAGGTaGGAAGGCTTCTCTGACCTTGGCCACAGCTCCCAGGATCCGATA +
Preference number: 2 (lower is better)
Translates to: LFKVWWRRREVRLLR*EGFSDLGHSSQDPI
Trigger: TATCGGATCCTGGGAGCTGTGGCCAAGGTCAGAGAAGCCTTCCAACCTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAGCCCCCATTCCTTTCTaGTGTGCCAGGCCAGGATGT +
Preference number: 2 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSAPIPF*CARPGC
Trigger: ACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGC...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR TCA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACTCGGGCCGTCTTCACTaGGGCCTGAATGCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYSGRLH*GLNAFH
Trigger: GTGGAAGGCATTCAGGCCTCAGTGAAGACGGCCCGA...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp ATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCGACTTCCCAGAATCTCCCTaGGTTCTTTGCCTGCACAGA +
Preference number: 2 (lower is better)
Translates to: ISQTMPFGHKPPDGSLTDFPESP*VLCLHR
Trigger: TCTGTGCAGGCAAAGAACGCAGGGAGATTCTGGGAA...GTCGGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp AACATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCATCCACCGCTGTGCTTaGTCAATCTTGCCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: NISQTMPFGHKPPDGSLTIHRCA*SILPSR
Trigger: CCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGAT...GGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp GAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCAGGAGGCGCCGTGGCTaGCACTGCCAACAGCTTGAT +
Preference number: 2 (lower is better)
Translates to: EAAFTASRNLGSSEFSTSRRRRG*HCQQLD
Trigger: ATCAAGCTGTTGGCAGTGGCAGCCACGGCGCCTCCT...GGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp ACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGCAGGATCTCACCAGCATCCCCTaGGGAGGCACTAGGGTCACG +
Preference number: 2 (lower is better)
Translates to: TELGILGILHLPLSHQQDLTSIP*GGTRVT
Trigger: CGTGACCCTAGTGCCTCCCCAGGGGATGCTGGTGAG...ATCCTGCTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp TCACCAGCATCCCCTGGGGAGGCACTAGGGTCACGGAGCCAACCTTaGGCCTGGTTCAGTTTGGAGTCTATGGAGGCCAATGCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: SPASPGEALGSRSQP*AWFSLESMEANALF
Trigger: GAAGAGAGCATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGACCCTAGTGCCTCCCCAGGGGATGCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp CGGCTTGCTGGACCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATACTCGGTGCTCCTGGTaGGTGAGCTCCTGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: RLAGPFASFIMELSGSHHTRCSW*VSSCCL
Trigger: GAGACAGCAGGAGCTCACTCACCAGGAGCACCGAGT...ATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp CCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTGCAATGCTCTGCTTTaGGTTGGTCATGGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: PQGVQLLWPVCCWPQPGWCNALL*VGHGFQ
Trigger: CTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCA...CCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp AAGCCCCCGGATGGCAGCCTGACCGACTCCACGGTCATCCACTGTGGGATTATCCTCAAGGTGTACAGCTaGTTTGGCCGGTCTGCTGTT +
Preference number: 2 (lower is better)
Translates to: KPPDGSLTDSTVIHCGIILKVYS*FGRSAV
Trigger: AACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAG...GATAATCCCACAGTGGATGACCGTGGAGTCGGTCAGGCTGCCATCCGGGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAGATTTGCCTGGGCCCTaGGTCTTGGGATTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSDLPGP*VLGFWK
Trigger: CTTCCAGAATCCCAAGACCCAGGGCCCAGGCAAATC...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp GGTACCACTGCCCCCTCTTACCAGCCGAGACATCTCAGCCATCAGCAGAGCCATGCTGAGCTTTCTGCATaGCCACCGGTGAGGATCCTT +
Preference number: 2 (lower is better)
Translates to: GTTAPSYQPRHLSHQQSHAELSA*PPVRIL
Trigger: AAGGATCCTCACCGGTGGCCATGCAGAAAGCTCAGC...ATGGCTCTGCTGATGGCTGAGATGTCTCGGCTGGTAAGAGGGGGCAGTGGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp CTCATCAAATACCTCTTCCCTGTTAGGCGCATCAGGAGGCGCCGTGGCTGCCACCAAGGCTCGAGCCTCTaGAGAATCTCCTTTCCCCTG +
Preference number: 2 (lower is better)
Translates to: LIKYLFPVRRIRRRRGCHQGSSL*RISFPL
Trigger: CAGGGGAAAGGAGATTCTCCAGAGGCTCGAGCCTTG...GTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGGGAAGAGGTATTTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp GGGGAGGCACTAGGGTCACGGAGCCAACCTTTGGCCTGGTTCAGTTaGGAGTCTATGGAGGCCAATGCTCTCTTCATGGCTTCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: GEALGSRSQPLAWFS*ESMEANALFMASVS
Trigger: GGACACTGAAGCCATGAAGAGAGCATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGACCCTAGTGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp GGTGGAGGCCTAGGTGGAGGGACCTCACCTTCAGGCAGAGGTGGTTaGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAAGGTCT +
Preference number: 2 (lower is better)
Translates to: GGGLGGGTSPSGRGG*GGASSSVSRSCSRS
Trigger: AGACCTTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTGAAGGTGAGGTCCCTCCACCTAGGCCTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp CCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGGTCTATGGAGGCCAATaGTCTCTTCATGGCTTCAGT +
Preference number: 2 (lower is better)
Translates to: PQGVQLLWPVCCWPQPGWVYGGQ*SLHGFS
Trigger: ACTGAAGCCATGAAGAGAGCATTGGCCTCCATAGAC...CCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAAGCTCCCAGCAACTCTaGGCAGCTCCTGGGACTCAG +
Preference number: 2 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLSSQQL*AAPGTQ
Trigger: CTGAGTCCCAGGAGCTGCCCAGAGTTGCTGGGAGCT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCCTGGGCCCTGGGTCTTaGGATTCTGGAAGAGTGAAT +
Preference number: 2 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFLGPGS*DSGRVN
Trigger: ATTCACTCTTCCAGAATCCCAAGACCCAGGGCCCAG...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp AGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGCTTCAGTGTCCTTGCTaGCCCAGGCATCTTCATCCC +
Preference number: 2 (lower is better)
Translates to: SLTELGILGILHLPLSHQLQCPC*PRHLHP
Trigger: GGGATGAAGATGCCTGGGCCAGCAAGGACACTGAAG...CTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp CTGGGCTGTCAGCTGGTCCACTCGGTCACACTTGGCGAGAAGATCTaGCCGATAAGGCCCCATCATAACATTAGCCAGACGATGCCCTTC +
Preference number: 2 (lower is better)
Translates to: LGCQLVHSVTLGEKI*PIRPHHNISQTMPF
Trigger: GAAGGGCATCGTCTGGCTAATGTTATGATGGGGCCTTATCGGCAAGATCTTCTCGCCAAGTGTGACCGAGTGGACCAGCTGACAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTGCTACCTTGGCGGGCTaGGGCAGGATATGGGACGGG +
Preference number: 2 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVATLAG*GRIWDG
Trigger: CCCGTCCCATATCCTGCCTCAGCCCGCCAAGGTAGC...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR GCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAACACCCTGGCTACTCTaGCCTTCCAGTGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLTPWLL*PSSGRE
Trigger: CTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGTGT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR GCA 90 bp ATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCGACTTCTTTGCAATGCTCTaGTTTGAGTTGGTCATGGCT +
Preference number: 2 (lower is better)
Translates to: ISQTMPFGHKPPDGSLTDFFAML*FELVMA
Trigger: AGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAA...GTCGGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGCAGGCCCCCATATGCTaGGGCTCCACAGAGGCCACC +
Preference number: 2 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRQAPIC*GSTEAT
Trigger: GGTGGCCTCTGTGGAGCCCCAGCATATGGGGGCCTG...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCGGGAGTGGCCCTGCTaGGAAGATGGCAGGGCCACA +
Preference number: 2 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVREWPC*EDGRAT
Trigger: TGTGGCCCTGCCATCTTCCCAGCAGGGCCACTCCCG...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp GGTACCACTGCCCCCTCTTACCAGCCGAGACATCTCAGCCATCAGCAGAGCCATCCAATGCTCTCTTCATaGCTTCAGTGTCCTTGCTGG +
Preference number: 2 (lower is better)
Translates to: GTTAPSYQPRHLSHQQSHPMLSS*LQCPCW
Trigger: CCAGCAAGGACACTGAAGCCATGAAGAGAGCATTGG...ATGGCTCTGCTGATGGCTGAGATGTCTCGGCTGGTAAGAGGGGGCAGTGGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp GACTCCACGGTCATCCACTGTGGGATTATCAATCCACCGCTGTGCTaGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGGCCGGTCT +
Preference number: 2 (lower is better)
Translates to: DSTVIHCGIINPPLC*LNLALKVYSCFGRS
Trigger: AGACCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATGACCGTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATTTCTTCTTAGTAACTaGTTTGCCTGGGCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSFLLSN*FAWALG
Trigger: ACCCAGGGCCCAGGCAAATCAGTTACTAAGAAGAAA...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR TCA 90 bp GGTACCACTGCCCCCTCTTACCAGCCGAGACATCTCAGCCATCAGCAGAGCCATTCTGCAAGCCAGTTCTaGGCAGCATCGATCTTCTTT +
Preference number: 2 (lower is better)
Translates to: GTTAPSYQPRHLSHQQSHSASQF*AASIFF
Trigger: AAAGAAGATCGATGCTGCTCAGAACTGGCTTGCAGA...ATGGCTCTGCTGATGGCTGAGATGTCTCGGCTGGTAAGAGGGGGCAGTGGTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp TTAGTCGGAGTTGTTCAAGGTCTGGTGGAGGCGGCGGGAAGTCAGGCTCCTGAGATCGCTGAAAACATCTaGCACTTCCTGAGTCATGGC +
Preference number: 2 (lower is better)
Translates to: LVGVVQGLVEAAGSQAPEIAENI*HFLSHG
Trigger: GCCATGACTCAGGAAGTGTCAGATGTTTTCAGCGAT...CTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAACTCCGACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTTGTCCCGATGCAAGGACTaGGCCGCGGCCAGAATGGGC +
Preference number: 2 (lower is better)
Translates to: CKRLVLIRLSVHCLATSLSRCKD*AAARMG
Trigger: GCCCATTCTGGCCGCGGCTCAGTCCTTGCATCGGGA...CAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp AAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTAAAGCACCTCGAATCTaGTCTTCTCCTTCCGGTCCA +
Preference number: 2 (lower is better)
Translates to: KVYSCFGRSAVGHSPVGFKAPRI*SSPSGP
Trigger: TGGACCGGAAGGAGAAGAGCAGATTCGAGGTGCTTT...AAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTTTGGTCTGCAGGTTCTaGAGGGCCGTGGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: MVAFTVDRILSWVLMVGILVCRF*RAVATC
Trigger: ACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAA...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp GTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCGCTCACATACCTGTCGCCGTGGCTGCCACTaGCAACAGCTTGATGGGAGT +
Preference number: 2 (lower is better)
Translates to: VDRILSWVLMVGIRSHTCRRGCH*QQLDGS
Trigger: ACTCCCATCAAGCTGTTGGCAGTGGCAGCCACGGCG...ACAGGTATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAATGGGATGGCTACCTTaGCGGGCTGAGGCAGGATAT +
Preference number: 2 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLMGWLP*RAEAGY
Trigger: ATATCCTGCCTCAGCCCGCCAAGGTAGCCATCCCAT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp GGCCCGACGAGCAATACTGGTTGCCCCAGCAACCAGCATCTGAGGCTGAATGTTGAGATTTGGTATCAATaGCTTCGTCCACCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: GPTSNTGCPSNQHLRLNVEIWYQ*LRPPAL
Trigger: CAGGGCTGGTGGACGAAGCCATTGATACCAAATCTC...AACATTCAGCCTCAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp GTTTTGCTCAATTCATCAGAGGCAGCTTTCACAGCCTCACGGAACTaGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGCAGG +
Preference number: 2 (lower is better)
Translates to: VLLNSSEAAFTASRN*GSSEFSTSLLATSR
Trigger: CCTGCTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCTGATGAATTGAGCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp AGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTaGGCCAACCGAGTCACCTCATCTGAGGCCTTGGCGATGTCCTTG +
Preference number: 2 (lower is better)
Translates to: RLVLIRLSVHCLATS*ANRVTSSEALAMSL
Trigger: CAAGGACATCGCCAAGGCCTCAGATGAGGTGACTCGGTTGGCCAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp ATGTTGGTCCGGCCCAGCATGGTGGCCTTCACTGTGGACAGGATTTaGAGCTGGGTGCTTATGGTTGGGATTCGCTCACATACCTGTAAG +
Preference number: 2 (lower is better)
Translates to: MLVRPSMVAFTVDRI*SWVLMVGIRSHTCK
Trigger: CTTACAGGTATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCATGCTGGGCCGGACCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGGCCCCCATTCCTTTCTaGTGTGCCAGGCCAGGATGT +
Preference number: 2 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRAPIPF*CARPGC
Trigger: ACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGC...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR TCA 90 bp CAGGCAGAGGTGGTTTGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAAAAGGAGTCTTGGAGCTaGGATGCAAGTGCTCGTGCC +
Preference number: 2 (lower is better)
Translates to: QAEVVWEEQAHLLVGVVQKESWS*DASARA
Trigger: GGCACGAGCACTTGCATCTCAGCTCCAAGACTCCTT...TTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp GTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCGCTCACATACCTGTGGGAAGTCAGGCTCCTaGGGTTGGAAGGCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: VDRILSWVLMVGIRSHTCGKSGS*GWKASL
Trigger: CAGAGAAGCCTTCCAACCTCAGGAGCCTGACTTCCC...ACAGGTATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCCTTGGCACACTGAATaGGTGCCCGCTTGGTACCAC +
Preference number: 2 (lower is better)
Translates to: MVAFTVDRILSWVLMVGIPWHTE*VPAWYH
Trigger: GTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGG...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGTGCCGGGAGTGGCCCTaGTGGGAAGATGGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKCREWP*WEDGRA
Trigger: GGCCCTGCCATCTTCCCAGCAGGGCCACTCCCGGCA...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR GCA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACTCATGGCTTCCAGCTTaGGAGCTGCATTTTCCACTT +
Preference number: 2 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYSWLPA*ELHFPL
Trigger: AAGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGA...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp AGAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCGTGCTTGCTCAATCTTaGCCTCAAGGTGTACAGCTG +
Preference number: 2 (lower is better)
Translates to: RGSFHSLTELGILGILHLVLAQS*PQGVQL
Trigger: CAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCAC...GAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp CGGCTTGCTGGACCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATATCAATCCACCGCTGTaGTTGCTCAATCTTGCCCTC +
Preference number: 2 (lower is better)
Translates to: RLAGPFASFIMELSGSHHINPPL*LLNLAL
Trigger: GAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGAT...ATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGCAGGCCCCCATATGCTaGGGCTCCACAGAGGCCACC +
Preference number: 2 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWQAPIC*GSTEAT
Trigger: GGTGGCCTCTGTGGAGCCCCAGCATATGGGGGCCTG...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGACTCTGCCCTTCCAGTaGCAGAGAGCACCAGGACAC +
Preference number: 2 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRTLPFQ*QRAPGH
Trigger: GTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGT...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTGGCAGGGCCACACCCTaGCTACTCTGCCCTTCCAGT +
Preference number: 2 (lower is better)
Translates to: STRILVCKYHSPLGRKCPGRATP*LLCPSS
Trigger: ACTGGAAGGGCAGAGTAGCCAGGGTGTGGCCCTGCC...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp GGCCCGACGAGCAATACTGGTTGCCCCAGCAACCAGCATCTGAGGCTGAATGTTAGCCAACCTTTGGCCTaGTTCAGTTTGGAGTCTATG +
Preference number: 2 (lower is better)
Translates to: GPTSNTGCPSNQHLRLNVSQPLA*FSLESM
Trigger: CATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCT...AACATTCAGCCTCAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp CGGCTTGCTGGACCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATTGCTCTGCTTTGAGTTaGTCATGGCTTCCAGCTTGC +
Preference number: 2 (lower is better)
Translates to: RLAGPFASFIMELSGSHHCSALS*SWLPAC
Trigger: GCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCA...ATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp GAGTCATGGCCTCCTGCATCCGAGCTTTTAGATCCTTTAAGGAGTCTTGGAGCTGGTGTACAGCTGCTTTaGCCGGTCTGCTGTTGGCCA +
Preference number: 2 (lower is better)
Translates to: ESWPPASELLDPLRSLGAGVQLL*PVCCWP
Trigger: TGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACC...AGCTCCAAGACTCCTTAAAGGATCTAAAAGCTCGGATGCAGGAGGCCATGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp CGATATCCTGAGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGAAATGTTTCCACCCGACGAGCAATACTaGTTGCCCCAGCAACCAGCA +
Preference number: 2 (lower is better)
Translates to: RYPESRKLFCSPGSEMFPPDEQY*LPQQPA
Trigger: TGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGG...TGGAAACATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp GAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCGAGTTGTGGTATCGCTaGAAACATCTGACACTTCCT +
Preference number: 2 (lower is better)
Translates to: EAAFTASRNLGSSEFSTSELWYR*KHLTLP
Trigger: AGGAAGTGTCAGATGTTTTCAGCGATACCACAACTC...GGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGATCCAGGCCCCCATATaGTGGGGCTCCACAGAGGCC +
Preference number: 2 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWIQAPI*WGSTEA
Trigger: GGCCTCTGTGGAGCCCCAGCATATGGGGGCCTGGAT...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR GCA 90 bp TTCATCAGAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCTGGCTTCAGTGTCCTTaGTGGCCCAGGCATCTTCAT +
Preference number: 2 (lower is better)
Translates to: FIRGSFHSLTELGILGILWLQCP*WPRHLH
Trigger: ATGAAGATGCCTGGGCCAGCAAGGACACTGAAGCCA...GAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCTGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAACTCTGGGCAGCTCCTaGGACTCAGATCATTTTCCT +
Preference number: 2 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRTLGSS*DSDHFP
Trigger: AGGAAAATGATCTGAGTCCCAGGAGCTGCCCAGAGT...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp CGATATCCTGAGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGAAATGTTTCCAAGGATCCTTGTCCTCTaGCACGGAGGTCAGCCACTT +
Preference number: 2 (lower is better)
Translates to: RYPESRKLFCSPGSEMFPRILVL*HGGQPL
Trigger: AAGTGGCTGACCTCCGTGCCAGAGGACAAGGATCCT...TGGAAACATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTaGCCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: YHSPLGRKCPSDRAA*PLNTLRGQALLFLR
Trigger: CCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CAA 90 bp CATACCTGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTaGGCAACCTCCTTGGCCAACCGAGTCACCTCATCTGAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: HTCKRLVLIRLSVHC*ATSLANRVTSSEAL
Trigger: CAAGGCCTCAGATGAGGTGACTCGGTTGGCCAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACAGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp TCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTTGGTCATGGCTTCGGAGGTCAGCCACTTaGTCAGTCATCTGCCCTAGC +
Preference number: 2 (lower is better)
Translates to: SEQHRSSLQCSALSWSWLRRSAT*SVICPS
Trigger: GCTAGGGCAGATGACTGATCAAGTGGCTGACCTCCG...AAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTTGACATTAGCCAGACGATaGCCTTCGGCCACAAGCCCC +
Preference number: 2 (lower is better)
Translates to: CKRLVLIRLSVHCLATSLTLARR*PSATSP
Trigger: GGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAATGT...CAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTACGAGCAATACTGGTTaGCCCAGCAACCAGCATCTG +
Preference number: 2 (lower is better)
Translates to: MVAFTVDRILSWVLMVGITSNTG*PSNQHL
Trigger: CAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGT...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAGCAGAGCAGAGTGTCTaGCTAGTGTTCACTTGGATT +
Preference number: 2 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLAEQSV*LVFTWI
Trigger: AATCCAAGTGAACACTAGCCAGACACTCTGCTCTGC...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGCTGGGCCCTGGGTCTTaGGATTCTGGAAGAGTGAAT +
Preference number: 2 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRLGPGS*DSGRVN
Trigger: ATTCACTCTTCCAGAATCCCAAGACCCAGGGCCCAG...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAGAAGGAAGGTATGGTTaGCAGCAACATGGAAAGCTC +
Preference number: 2 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSREGRYG*QQHGKL
Trigger: GAGCTTTCCATGTTGCTGCCAACCATACCTTCCTTC...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGACAGGGAAGGAAGGTATaGTTGGCAGCAACATGGAAA +
Preference number: 2 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRQGRKV*LAATWK
Trigger: TTTCCATGTTGCTGCCAACCATACCTTCCTTCCCTG...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTATGGGATGGCTACCTTaGCGGGCTGAGGCAGGATAT +
Preference number: 2 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVMGWLP*RAEAGY
Trigger: ATATCCTGCCTCAGCCCGCCAAGGTAGCCATCCCAT...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTGACACAGTGTGTTCATaGGATGGCTACCTTGGCGGG +
Preference number: 2 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVDTVCS*DGYLGG
Trigger: CCCGCCAAGGTAGCCATCCCATGAACACACTGTGTC...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTGCTTTGAGTTGGTCATaGCTTCCAGCTTGCGAGCTG +
Preference number: 2 (lower is better)
Translates to: MVAFTVDRILSWVLMVGIALSWS*LPACEL
Trigger: CAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGC...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp CGATATCCTGAGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGAAATGTTTCCACCACTCGGTCACACTTaGCGAGAAGATCTTGCCGAT +
Preference number: 2 (lower is better)
Translates to: RYPESRKLFCSPGSEMFPPLGHT*REDLAD
Trigger: ATCGGCAAGATCTTCTCGCCAAGTGTGACCGAGTGG...TGGAAACATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp TTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCACACTTCCTGAGTCATaGCCTCCTGCATCCGAGCTT +
Preference number: 2 (lower is better)
Translates to: LRASSWSCLAAIIIGWLITLPES*PPASEL
Trigger: AAGCTCGGATGCAGGAGGCCATGACTCAGGAAGTGT...GATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACCATCCAACAGAGATTTaGTATCAATGGCTTCGTCCA +
Preference number: 2 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYHPTEI*YQWLRP
Trigger: TGGACGAAGCCATTGATACCAAATCTCTGTTGGATG...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp TTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCCAGGATCCGATATCCTaGGTCCAGGAAGCTCTTTTG +
Preference number: 2 (lower is better)
Translates to: LRASSWSCLAAIIIGWLIQDPIS*VQEALL
Trigger: CAAAAGAGCTTCCTGGACTCAGGATATCGGATCCTG...GATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTTGGGCTGGTTGACCGGCTaGTTGGATGGCATTAACAGC +
Preference number: 2 (lower is better)
Translates to: CKRLVLIRLSVHCLATSLGWLTG*LDGINS
Trigger: GCTGTTAATGCCATCCAATCAGCCGGTCAACCAGCC...CAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp TTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCTCTCCCTGCGTTCTTTaGCTGCACAGAGTTCACCAA +
Preference number: 2 (lower is better)
Translates to: LRASSWSCLAAIIIGWLISPCVL*LHRVHQ
Trigger: TTGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGA...GATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp CAGGCAGAGGTGGTTTGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAATCTGCCCTAGCATTTTaGAAGTTCCCAGAATCTCCC +
Preference number: 2 (lower is better)
Translates to: QAEVVWEEQAHLLVGVVQSALAF*KFPESP
Trigger: GGGAGATTCTGGGAACTTGCAAAATGCTAGGGCAGA...TTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp TTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCTTCCGGTCCACCATTTaGATCTGCAAGCCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: LRASSWSCLAAIIIGWLIFRSTI*ICKPVL
Trigger: CAGAACTGGCTTGCAGATCCAAATGGTGGACCGGAA...GATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 90 bp GGGCTGAGGCAGGATATGGGACGGGAAGTTTCCCTAGCACAGACATaGCTCAGGGGCATGGTAAAAGCAGAATCATATGATTCTGTGATT +
Preference number: 2 (lower is better)
Translates to: GLRQDMGREVSLAQT*LRGMVKAESYDSVI
Trigger: AATCACAGAATCATATGATTCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCCATATCCTGCCTCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CAA 90 bp AGCCCTGGTGGATCCCTGAAAACCCTATTTATTCTATACTGGGCTTaGGAATATGAAAAATGGACCTGTGTGGCCGGGCGTGGTGGATCA +
Preference number: 2 (lower is better)
Translates to: SPGGSLKTLFILYWA*EYEKWTCVAGRGGS
Trigger: TGATCCACCACGCCCGGCCACACAGGTCCATTTTTCATATTCCAAAGCCCAGTATAGAATAAATAGGGTTTTCAGGGATCCACCAGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR CAA 90 bp CAAGCCAGTTCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTaGAGTTGGTCATGGCTTCCAGCTTGCGAGCTGCATTTTCCACTT +
Preference number: 2 (lower is better)
Translates to: QASSEQHRSSLQCSA*SWSWLPACELHFPL
Trigger: AAGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGAACTGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGGGGATTCTGGAAGAGTaGATGGGAGCCAAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRGILEE*MGAKER
Trigger: TCTTTCCTTGGCTCCCATTCACTCTTCCAGAATCCC...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR TCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACAGGAAGGGCAGGAAATaGATCCAGGCCCCCATATGC +
Preference number: 2 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHRKGRK*IQAPIC
Trigger: GCATATGGGGGCCTGGATTCATTTCCTGCCCTTCCT...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR-3UTR TCA 90 bp AGAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCAATGCCTTCCACTGTTaGTTTATTAGCAGTACCAAC +
Preference number: 2 (lower is better)
Translates to: RGSFHSLTELGILGILHLNAFHC*FISSTN
Trigger: GTTGGTACTGCTAATAAATCAACAGTGGAAGGCATT...GAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATATCCAGGCCCCCATATaGTGGGGCTCCACAGAGGCC +
Preference number: 2 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDIQAPI*WGSTEA
Trigger: GGCCTCTGTGGAGCCCCAGCATATGGGGGCCTGGAT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR GCA 90 bp TCAATCCACCGCTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGATGTTCCAGAGAGGATaGCCCTTGACCCATCAATTA +
Preference number: 2 (lower is better)
Translates to: SIHRCACSILPSRCTAALMFQRG*PLTHQL
Trigger: TAATTGATGGGTCAAGGGGCATCCTCTCTGGAACAT...CAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCCTGCGTTCTTTGCCTaGACAGAGTTCACCAACTTT +
Preference number: 2 (lower is better)
Translates to: MVAFTVDRILSWVLMVGIPAFFA*TEFTNF
Trigger: AAAGTTGGTGAACTCTGTGCAGGCAAAGAACGCAGG...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp TCAATCCACCGCTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGTTCCAGCTTGCGAGCTaGATTTTCCACTTTTGCTGT +
Preference number: 2 (lower is better)
Translates to: SIHRCACSILPSRCTAALFQLAS*IFHFCC
Trigger: ACAGCAAAAGTGGAAAATGCAGCTCGCAAGCTGGAA...CAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp TTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCTCGGGGAGATGGTTTTaGTCAATTCATCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LRASSWSCLAAIIIGWLISGRWF*SIHQRQ
Trigger: CTGCCTCTGATGAATTGAGCAAAACCATCTCCCCGA...GATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATATGGAGTGCCGGGAGTaGCCCTGCTGGGAAGATGGC +
Preference number: 2 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDMECRE*PCWEDG
Trigger: GCCATCTTCCCAGCAGGGCCACTCCCGGCACTCCAT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp CAGGCAGAGGTGGTTTGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAATCAGTTTGGAGTCTATaGAGGCCAATGCTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: QAEVVWEEQAHLLVGVVQSVWSL*RPMLSS
Trigger: TGAAGAGAGCATTGGCCTCCATAGACTCCAAACTGA...TTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGAAATGTCTTCTAATTTaGAGAGGCCCCCATTCCTTT +
Preference number: 2 (lower is better)
Translates to: RKEKQREVSPREQGQSRVKCLLI*RGPHSF
Trigger: AAAGGAATGGGGGCCTCTTCAAATTAGAAGACATTT...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR TCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGTTTCTTCTTAGTAACTaGTTTGCCTGGGCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRFLLSN*FAWALG
Trigger: ACCCAGGGCCCAGGCAAATCAGTTACTAAGAAGAAA...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR TCA 90 bp TCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTTGGTCATGGCTTTTTCCACTTTTGCTGTaGGCACATCCAGACCCTGAG +
Preference number: 2 (lower is better)
Translates to: SEQHRSSLQCSALSWSWLFPLLL*AHPDPE
Trigger: CTCAGGGTCTGGATGTGCTCACAGCAAAAGTGGAAA...AAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp CAGGCAGAGGTGGTTTGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAATCACTGAGGCCTGAATaGCTTCCACTGTTGATTTAT +
Preference number: 2 (lower is better)
Translates to: QAEVVWEEQAHLLVGVVQSLRPE*LPLLIY
Trigger: ATAAATCAACAGTGGAAGGCATTCAGGCCTCAGTGA...TTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTACTCTGGGCAGCTCCTaGGACTCAGATCATTTTCCT +
Preference number: 2 (lower is better)
Translates to: STRILVCKYHSPLGRKCPTLGSS*DSDHFP
Trigger: AGGAAAATGATCTGAGTCCCAGGAGCTGCCCAGAGT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGGAAGGAAGGTATGGTTaGCAGCAACATGGAAAGCTC +
Preference number: 2 (lower is better)
Translates to: SRCRELGCSWLQGGRNYREGRYG*QQHGKL
Trigger: GAGCTTTCCATGTTGCTGCCAACCATACCTTCCTTC...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGAGTGTGTTCATGGGATaGCTACCTTGGCGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKSVFMG*LPWRAE
Trigger: CTCAGCCCGCCAAGGTAGCCATCCCATGAACACACT...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGACACACAGCGATGGGTaGGAAGGAAGGATGTTCAGG +
Preference number: 2 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVTHSDG*EGRMFR
Trigger: CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGT...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR-3UTR TCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACGGGATTCTGGAAGAGTaGATGGGAGCCAAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHGILEE*MGAKER
Trigger: TCTTTCCTTGGCTCCCATTCACTCTTCCAGAATCCC...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR-3UTR GCA 90 bp CTGCTGTCTCTCGTCAATCATCTTGGCCATCTTAGTCATTCCTGGCCCAAGATTAGTCTCCACCACCTCTaGCACTGTAAGATATTCCAA +
Preference number: 2 (lower is better)
Translates to: LLSLVNHLGHLSHSWPKISLHHL*HCKIFQ
Trigger: TTGGAATATCTTACAGTGGCAGAGGTGGTGGAGACT...AATCTTGGGCCAGGAATGACTAAGATGGCCAAGATGATTGACGAGAGACAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGACCCAGTCTGCCTATTaGGATAGAGGGTGCACAAGT +
Preference number: 2 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWTQSAY*DRGCTS
Trigger: ACTTGTGCACCCTCTATCCCAATAGGCAGACTGGGT...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCCAAGCTTTCCTGAATaGTTTTCAAAGTTAGCTGCC +
Preference number: 2 (lower is better)
Translates to: MVAFTVDRILSWVLMVGIPSFPE*FSKLAA
Trigger: GGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGG...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAGGAAGGGCAGGAAATaGATCCAGGCCCCCATATGC +
Preference number: 2 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKRKGRK*IQAPIC
Trigger: GCATATGGGGGCCTGGATTCATTTCCTGCCCTTCCT...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACATGGCTAGTGTTCACTTaGATTCTGAGCTTATGTGAA +
Preference number: 2 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTWLVFT*ILSLCE
Trigger: TTCACATAAGCTCAGAATCCAAGTGAACACTAGCCA...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATGATTTGCCTGGGCCCTaGGTCTTGGGATTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDDLPGP*VLGFWK
Trigger: CTTCCAGAATCCCAAGACCCAGGGCCCAGGCAAATC...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACCAGGGAAGGAAGGTATaGTTGGCAGCAACATGGAAA +
Preference number: 2 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHQGRKV*LAATWK
Trigger: TTTCCATGTTGCTGCCAACCATACCTTCCTTCCCTG...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGGAGCTTGGTTGTAGTTaGTTGCAGGGAGGTAGGAAT +
Preference number: 2 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWELGCS*LQGGRN
Trigger: ATTCCTACCTCCCTGCAACCAACTACAACCAAGCTC...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACACTAACACACAGCGATaGGTGGGAAGGAAGGATGTT +
Preference number: 2 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHTNTQR*VGRKDV
Trigger: AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGT...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR-3UTR CCA 90 bp GAGTCATGGCCTCCTGCATCCGAGCTTTTAGATCCTTTAAGGAGTCTTGGAGCTCATCTTAGTCATTCCTaGCCCAAGATTCTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: ESWPPASELLDPLRSLGAHLSHS*PKILCV
Trigger: TACACAAAGAATCTTGGGCCAGGAATGACTAAGATG...AGCTCCAAGACTCCTTAAAGGATCTAAAAGCTCGGATGCAGGAGGCCATGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGTCCTTCAGACAGGGCTaGCTTGCCATTAAACACTCT +
Preference number: 2 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKSFRQG*LAIKHS
Trigger: AGAGTGTTTAATGGCAAGGCAGCCCTGTCTGAAGGA...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR TCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTAAATGTCTTCTAATTTaGAGAGGCCCCCATTCCTTT +
Preference number: 2 (lower is better)
Translates to: STRILVCKYHSPLGRKCPKCLLI*RGPHSF
Trigger: AAAGGAATGGGGGCCTCTTCAAATTAGAAGACATTT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAATGGGTCTTGGGATTCTaGAAGAGTGAATGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKWVLGF*KSEWEP
Trigger: TGGCTCCCATTCACTCTTCCAGAATCCCAAGACCCA...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATTGGGTCTTGGGATTCTaGAAGAGTGAATGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDWVLGF*KSEWEP
Trigger: TGGCTCCCATTCACTCTTCCAGAATCCCAAGACCCA...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR TCA 90 bp TCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTTGGTCATGGCTTAAAAATCTTCATAGCTaGAATGAGAACTGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: SEQHRSSLQCSALSWSWLKNLHS*NENWQQ
Trigger: TTGCTGCCAGTTCTCATTTCAGCTATGAAGATTTTT...AAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAGCAGAGCAGAGTGTCTaGCTAGTGTTCACTTGGATT +
Preference number: 2 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKAEQSV*LVFTWI
Trigger: AATCCAAGTGAACACTAGCCAGACACTCTGCTCTGC...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CAA 90 bp ATAGTCTCCACCACCTCTGCCACTGTAAGATATTCCAAAATTCCTTaGCAAACTCTAATAATTTTACGGACCTCAGCCTCATCGAAGGTA +
Preference number: 2 (lower is better)
Translates to: IVSTTSATVRYSKIP*QTLIILRTSASSKV
Trigger: TACCTTCGATGAGGCTGAGGTCCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAATATCTTACAGTGGCAGAGGTGGTGGAGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR TCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATTGTTCACTTGGATTCTaGGCTTATGTGAAGTCCATG +
Preference number: 2 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDCSLGF*AYVKSM
Trigger: CATGGACTTCACATAAGCTCAGAATCCAAGTGAACA...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAATGGCTAGTGTTCACTTaGATTCTGAGCTTATGTGAA +
Preference number: 2 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKWLVFT*ILSLCE
Trigger: TTCACATAAGCTCAGAATCCAAGTGAACACTAGCCA...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR GCA 72 bp GGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTGGTCTaGAGGTTCTGCAGGGCCGTGGCCACCTGTTTGGCC +
Preference number: 3 (lower is better)
Translates to: GLLLATARLVLV*RFCRAVATCLA
Trigger: GGCCAAACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp CTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTaGTTTTGGTCTGCAGGTTCTGCAGGGCCGTGGCCA +
Preference number: 3 (lower is better)
Translates to: LLWPVCCWPQPG*FWSAGSAGPWP
Trigger: TGGCCACGGCCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp TGCTGGGAAGATGGCAGGGCCACACCCTGGCTACTCTaGCCTTCCAGTGGCAGAGAGCACCAGGACACAGTG +
Preference number: 3 (lower is better)
Translates to: CWEDGRATPWLL*PSSGREHQDTV
Trigger: CACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGTGTGGCCCTGCCATCTTCCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CCA 72 bp TGGTCTGCAGGTTCTGCAGGGCCGTGGCCACCTGTTTaGCCAAGGCTCGAGCCTCTGGAGAATCTCCTTTCC +
Preference number: 3 (lower is better)
Translates to: WSAGSAGPWPPV*PRLEPLENLLS
Trigger: GGAAAGGAGATTCTCCAGAGGCTCGAGCCTTGGCCAAACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp ATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCGACGTCATGGCTTCCAGCTaGCGAGCTGCATTTTCCACT +
Preference number: 3 (lower is better)
Translates to: ISQTMPFGHKPPDGSLTDVMASS*RAAFST
Trigger: AGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGAC...GTCGGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 72 bp CCAGCATCTCTGTGGCCTGCTCAGACTCCTCATCACTaGTGTTGGTCCGGCCCAGCATGGTGGCCTTCACTG +
Preference number: 3 (lower is better)
Translates to: PASLWPAQTPHH*CWSGPAWWPSL
Trigger: CAGTGAAGGCCACCATGCTGGGCCGGACCAACATCAGTGATGAGGAGTCTGAGCAGGCCACAGAGATGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp CCTGTTAGGCGCATCAGGAGGCGCCGTGGCTGCCACTaGCAACAGCTTGATGGGAGTTGTGGTATCGCTGAA +
Preference number: 3 (lower is better)
Translates to: PVRRIRRRRGCH*QQLDGSCGIAE
Trigger: TTCAGCGATACCACAACTCCCATCAAGCTGTTGGCAGTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp CTCTTCCCTGTTAGGCGCATCAGGAGGCGCCGTGGCTaGCACTGCCAACAGCTTGATGGGAGTTGTGGTATC +
Preference number: 3 (lower is better)
Translates to: LFPVRRIRRRRG*HCQQLDGSCGI
Trigger: GATACCACAACTCCCATCAAGCTGTTGGCAGTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGGGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp CAGCAGGATCCGGTTGGCCCGACGAGCAATACTGGTTaGCCCAGCAACCAGCATCTGAGGCTGAATGTTGGC +
Preference number: 3 (lower is better)
Translates to: QQDPVGPTSNTG*PSNQHLRLNVG
Trigger: GCCAACATTCAGCCTCAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCCAACCGGATCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp CCACCAGCAGGATCCGGTTGGCCCGACGAGCAATACTaGTTGCCCCAGCAACCAGCATCTGAGGCTGAATGT +
Preference number: 3 (lower is better)
Translates to: PPAGSGWPDEQY*LPQQPASEAEC
Trigger: ACATTCAGCCTCAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCCAACCGGATCCTGCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp TGCCTCAGCTACAACACCTATACCCACCTCAGCGGCTaGGATGCCCGGCTTGCTGGACCATTTGCGAGCTTC +
Preference number: 3 (lower is better)
Translates to: CLSYNTYTHLSG*DARLAGPFASF
Trigger: GAAGCTCGCAAATGGTCCAGCAAGCCGGGCATCCCAGCCGCTGAGGTGGGTATAGGTGTTGTAGCTGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCCCTGGGCCCTGGGTCTaGGGATTCTGGAAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFPGPWV*GFWKSE
Trigger: TTCACTCTTCCAGAATCCCAAGACCCAGGGCCCAGG...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CAA 90 bp GAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCAGGTGTACAGCTGCTTaGGCCGGTCTGCTGTTGGCC +
Preference number: 3 (lower is better)
Translates to: EAAFTASRNLGSSEFSTSRCTAA*AGLLLA
Trigger: GGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCT...GGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp TTAGTCGGAGTTGTTCAAGGTCTGGTGGAGGCGGCGGGAAGTCAGGCTCCTGAGATGGCTTCAGTGTCCTaGCTGGCCCAGGCATCTTCA +
Preference number: 3 (lower is better)
Translates to: LVGVVQGLVEAAGSQAPEMASVS*LAQASS
Trigger: TGAAGATGCCTGGGCCAGCAAGGACACTGAAGCCAT...CTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAACTCCGACTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp CCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGATGCTCTGCTTTGAGTaGGTCATGGCTTCCAGCTTG +
Preference number: 3 (lower is better)
Translates to: PQGVQLLWPVCCWPQPGWMLCFE*VMASSL
Trigger: CAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCAT...CCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACACAGCCCGGTTGGTTTaGGTCTGCAGGTTCTGCAGG +
Preference number: 3 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYTARLV*VCRFCR
Trigger: CCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGT...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp CGGCTTGCTGGACCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATACCAGCAGGATCCGGTaGGCCCGACGAGCAATACTG +
Preference number: 3 (lower is better)
Translates to: RLAGPFASFIMELSGSHHTSRIR*ARRAIL
Trigger: CAGTATTGCTCGTCGGGCCAACCGGATCCTGCTGGT...ATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 72 bp GATGCAAGGACTGAGCCGCGGCCAGAATGGGCTGGTTaGCCGGCTGATTGGATGGCATTAACAGCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: DARTEPRPEWAG*PADWMALTAAQ
Trigger: CTGAGCTGCTGTTAATGCCATCCAATCAGCCGGTCAACCAGCCCATTCTGGCCGCGGCTCAGTCCTTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 72 bp CATCTGAGGCCTTGGCGATGTCCTTGGCACACTGAATaGGTGCCCGCTTGGTACCACTGCCCCCTCTTACCA +
Preference number: 3 (lower is better)
Translates to: HLRPWRCPWHTE*VPAWYHCPLLP
Trigger: TGGTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATCGCCAAGGCCTCAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp TCTTGCCCTCAAGGTGTACAGCTGCTTTGGCCGGTCTaGTGTTGGCCACAGCCCGGTTGGTTTTGGTCTGCA +
Preference number: 3 (lower is better)
Translates to: SCPQGVQLLWPV*CWPQPGWFWSA
Trigger: TGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp CTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTaGTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTT +
Preference number: 3 (lower is better)
Translates to: LCLLNLALKVYS*FGRSAVGHSPV
Trigger: AACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp GCACCAGGACACAGTGTGTTCATGGGATGGCTACCTTaGCGGGCTGAGGCAGGATATGGGACGGGAAGTTTC +
Preference number: 3 (lower is better)
Translates to: APGHSVFMGWLP*RAEAGYGTGSF
Trigger: GAAACTTCCCGTCCCATATCCTGCCTCAGCCCGCCAAGGTAGCCATCCCATGAACACACTGTGTCCTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CCA 72 bp TCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATaGGATGGCTACCTTGGCGGGCTGAGGCAGGATATG +
Preference number: 3 (lower is better)
Translates to: SSGREHQDTVCS*DGYLGGLRQDM
Trigger: CATATCCTGCCTCAGCCCGCCAAGGTAGCCATCCCATGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CCA 72 bp GGGGAGGCACTAGGGTCACGGAGCCAACCTTTGGCCTaGTTCAGTTTGGAGTCTATGGAGGCCAATGCTCTC +
Preference number: 3 (lower is better)
Translates to: GEALGSRSQPLA*FSLESMEANAL
Trigger: GAGAGCATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGACCCTAGTGCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp CATCCAGACCCTGAGATACCTGCTGAGCTTTCTGCATaGCCACCGGTGAGGATCCTTGTCCTCTGGCACGGA +
Preference number: 3 (lower is better)
Translates to: HPDPEIPAELSA*PPVRILVLWHG
Trigger: TCCGTGCCAGAGGACAAGGATCCTCACCGGTGGCCATGCAGAAAGCTCAGCAGGTATCTCAGGGTCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp CCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTaGCCACAGCCCGGTTGGTTTTGGTCTGCAGGTTCT +
Preference number: 3 (lower is better)
Translates to: PQGVQLLWPVCC*PQPGWFWSAGS
Trigger: AGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp CTCTTCATCCTTTTCCTCTGGTGGTGGAGGCCTAGGTaGAGGGACCTCACCTTCAGGCAGAGGTGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: LFILFLWWWRPR*RDLTFRQRWFG
Trigger: CCCAAACCACCTCTGCCTGAAGGTGAGGTCCCTCCACCTAGGCCTCCACCACCAGAGGAAAAGGATGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp CTGCTCAGGGAACTCTTCATCCTTTTCCTCTGGTGGTaGAGGCCTAGGTGGAGGGACCTCACCTTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: LLRELFILFLWW*RPRWRDLTFRQ
Trigger: CTGCCTGAAGGTGAGGTCCCTCCACCTAGGCCTCCACCACCAGAGGAAAAGGATGAAGAGTTCCCTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp ATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCGACCTCTCGTCAATCATCTaGGCCATCTTAGTCATTCCT +
Preference number: 3 (lower is better)
Translates to: ISQTMPFGHKPPDGSLTDLSSII*AILVIP
Trigger: AGGAATGACTAAGATGGCCAAGATGATTGACGAGAG...GTCGGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 72 bp GGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTaGTTTTTCAGCTCCCAGCAACTCTGGGCAGCTCCT +
Preference number: 3 (lower is better)
Translates to: GPHSFLMCQARM*FFSSQQLWAAP
Trigger: AGGAGCTGCCCAGAGTTGCTGGGAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR TCA 72 bp TCTGACCTTGGCCACAGCTCCCAGGATCCGATATCCTaGGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGA +
Preference number: 3 (lower is better)
Translates to: SDLGHSSQDPIS*VQEALLQSRVG
Trigger: TCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCGGATCCTGGGAGCTGTGGCCAAGGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCTCCCTAGCACAGACATaGCTCAGGGGCATGGTAAAA +
Preference number: 3 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFSLAQT*LRGMVK
Trigger: TTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGA...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CAA 90 bp GAGTCATGGCCTCCTGCATCCGAGCTTTTAGATCCTTTAAGGAGTCTTGGAGCTTTGGCCGGTCTGCTGTaGGCCACAGCCCGGTTGGTT +
Preference number: 3 (lower is better)
Translates to: ESWPPASELLDPLRSLGALAGLL*ATARLV
Trigger: AACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAA...AGCTCCAAGACTCCTTAAAGGATCTAAAAGCTCGGATGCAGGAGGCCATGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp AGAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCTCCACTCGGTCACACTaGGCGAGAAGATCTTGCCGA +
Preference number: 3 (lower is better)
Translates to: RGSFHSLTELGILGILHLSTRSH*ARRSCR
Trigger: TCGGCAAGATCTTCTCGCCAAGTGTGACCGAGTGGA...GAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACGTCCAGGAAGCTCTTTaGCAGTCCAGGGTCGGAAAT +
Preference number: 3 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYVQEAL*QSRVGN
Trigger: ATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGAC...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp GTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCGCTCACATACCTGTGCTGGGATGCCCGGCTaGCTGGACCATTTGCGAGCT +
Preference number: 3 (lower is better)
Translates to: VDRILSWVLMVGIRSHTCAGMPG*LDHLRA
Trigger: AGCTCGCAAATGGTCCAGCAAGCCGGGCATCCCAGC...ACAGGTATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp GGATGGCAGCCTGACCGACTCCACGGTCATCCACTGTaGGATTATCAATCCACCGCTGTGCTTGCTCAATCT +
Preference number: 3 (lower is better)
Translates to: GWQPDRLHGHPL*DYQSTAVLAQS
Trigger: AGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATGACCGTGGAGTCGGTCAGGCTGCCATCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp AGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTaGCTGGTTAATCACCTCCCCGGCCTTCTGCTCAGG +
Preference number: 3 (lower is better)
Translates to: SFIMELSGSHHH*LVNHLPGLLLR
Trigger: CCTGAGCAGAAGGCCGGGGAGGTGATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACTTGGCCTGGTTCAGTTaGGAGTCTATGGAGGCCAAT +
Preference number: 3 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYLAWFS*ESMEAN
Trigger: ATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAA...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 72 bp TCGAGTTCACCAACATCACTCGGTGCTCCTGGTGAGTaGGCTCCTGCTGTCTCTCGTCAATCATCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: SSSPTSLGAPGE*APAVSRQSSWP
Trigger: TGGCCAAGATGATTGACGAGAGACAGCAGGAGCTCACTCACCAGGAGCACCGAGTGATGTTGGTGAACTCGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 72 bp GAGGATCCTTGTCCTCTGGCACGGAGGTCAGCCACTTaGTCAGTCATCTGCCCTAGCATTTTGCAAGTTCCC +
Preference number: 3 (lower is better)
Translates to: EDPCPLARRSAT*SVICPSILQVP
Trigger: GGGAACTTGCAAAATGCTAGGGCAGATGACTGATCAAGTGGCTGACCTCCGTGCCAGAGGACAAGGATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 72 bp GGCCCAGCATGGTGGCCTTCACTGTGGACAGGATTTTaGGCTGGGTGCTTATGGTTGGGATTCGCTCACATA +
Preference number: 3 (lower is better)
Translates to: GPAWWPSLWTGF*AGCLWLGFAHI
Trigger: TATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCATGCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp ATGCCCGGCTTGCTGGACCATTTGCGAGCTTCATCATaGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTA +
Preference number: 3 (lower is better)
Translates to: MPGLLDHLRASS*SCLAAIIIGWL
Trigger: TAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp TTAGTCGGAGTTGTTCAAGGTCTGGTGGAGGCGGCGGGAAGTCAGGCTCCTGAGCAGCATCGATCTTCTTaGCAATGCTCTGCTTTGAGT +
Preference number: 3 (lower is better)
Translates to: LVGVVQGLVEAAGSQAPEQHRSS*QCSALS
Trigger: ACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTG...CTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAACTCCGACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 72 bp CGCAGCCGCCTTCTCGGCCGTAGCACCAAGCTTTCCTaGATGGTTTTCAAAGTTAGCTGCCCTCTCATCAAA +
Preference number: 3 (lower is better)
Translates to: RSRLLGRSTKLS*MVFKVSCPLIK
Trigger: TTTGATGAGAGGGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCTACGGCCGAGAAGGCGGCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp TTTGGCCTGGTTCAGTTTGGAGTCTATGGAGGCCAATaGTCTCTTCATGGCTTCAGTGTCCTTGCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: FGLVQFGVYGGQ*SLHGFSVLAGP
Trigger: TGGGCCAGCAAGGACACTGAAGCCATGAAGAGAGCATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp ACGGTCATCCACTGTGGGATTATCAATCCACCGCTGTaGTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGC +
Preference number: 3 (lower is better)
Translates to: TVIHCGIINPPL*LLNLALKVYSC
Trigger: GCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATGACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACCAGAGAGGATGCCCCTaGACCCATCAATTAGATAAT +
Preference number: 3 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYQRGCP*THQLDN
Trigger: ATTATCTAATTGATGGGTCAAGGGGCATCCTCTCTG...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp TTCTCGGCCGTAGCACCAAGCTTTCCTGAATGGTTTTCAAAGTTAGCTGCCCTCCTTCCGGTCCACCATTaGGATCTGCAAGCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: FSAVAPSFPEWFSKLAALLPVHH*DLQASS
Trigger: AGAACTGGCTTGCAGATCCAAATGGTGGACCGGAAG...GAGGGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCTACGGCCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTTGTTGGCCACAGCCCGGTaGGTTTTGGTCTGCAGGTTC +
Preference number: 3 (lower is better)
Translates to: CKRLVLIRLSVHCLATSLLATAR*VLVCRF
Trigger: GAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAA...CAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp GAGTCATGGCCTCCTGCATCCGAGCTTTTAGATCCTTTAAGGAGTCTTGGAGCTAATCCACCGCTGTGCTaGCTCAATCTTGCCCTCAAG +
Preference number: 3 (lower is better)
Translates to: ESWPPASELLDPLRSLGANPPLC*LNLALK
Trigger: CTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATT...AGCTCCAAGACTCCTTAAAGGATCTAAAAGCTCGGATGCAGGAGGCCATGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 72 bp TTCATCGAGTTCACCAACATCACTCGGTGCTCCTGGTaGGTGAGCTCCTGCTGTCTCTCGTCAATCATCTTG +
Preference number: 3 (lower is better)
Translates to: FIEFTNITRCSW*VSSCCLSSIIL
Trigger: CAAGATGATTGACGAGAGACAGCAGGAGCTCACTCACCAGGAGCACCGAGTGATGTTGGTGAACTCGATGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 72 bp CTTCCAGCTTGCGAGCTGCATTTTCCACTTTTGCTGTaGGCACATCCAGACCCTGAGATACCTGCTGAGCTT +
Preference number: 3 (lower is better)
Translates to: LPACELHFPLLL*AHPDPEIPAEL
Trigger: AAGCTCAGCAGGTATCTCAGGGTCTGGATGTGCTCACAGCAAAAGTGGAAAATGCAGCTCGCAAGCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR TCA 72 bp TGGGGTGTGAGTTCTCGGGCCGTCTTCACTGAGGCCTaGATGCCTTCCACTGTTGATTTATTAGCAGTACCA +
Preference number: 3 (lower is better)
Translates to: WGVSSRAVFTEA*MPSTVDLLAVP
Trigger: TGGTACTGCTAATAAATCAACAGTGGAAGGCATTCAGGCCTCAGTGAAGACGGCCCGAGAACTCACACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp TCAGTTTGGAGTCTATGGAGGCCAATGCTCTCTTCATaGCTTCAGTGTCCTTGCTGGCCCAGGCATCTTCAT +
Preference number: 3 (lower is better)
Translates to: SVWSLWRPMLSS*LQCPCWPRHLH
Trigger: ATGAAGATGCCTGGGCCAGCAAGGACACTGAAGCCATGAAGAGAGCATTGGCCTCCATAGACTCCAAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp GCCGCCTTCTCGGCCGTAGCACCAAGCTTTCCTGAATaGTTTTCAAAGTTAGCTGCCCTCTCATCAAATACC +
Preference number: 3 (lower is better)
Translates to: AAFSAVAPSFPE*FSKLAALSSNT
Trigger: GGTATTTGATGAGAGGGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCTACGGCCGAGAAGGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp AGCATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTaGGTGCTTATGGTTGGGATTCGCTCACATACCTGT +
Preference number: 3 (lower is better)
Translates to: SMVAFTVDRILS*VLMVGIRSHTC
Trigger: ACAGGTATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGCCTGGGCCCTGGGTCTaGGGATTCTGGAAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWPGPWV*GFWKSE
Trigger: TTCACTCTTCCAGAATCCCAAGACCCAGGGCCCAGG...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CAA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACATCAGACAGGGCTGCCTaGCCATTAAACACTCTTAGG +
Preference number: 3 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTSDRAA*PLNTLR
Trigger: CCTAAGAGTGTTTAATGGCAAGGCAGCCCTGTCTGA...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR TCA 72 bp CTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTaGGTTGGTCATGGCTTCCAGCTTGCGAGCTGCATT +
Preference number: 3 (lower is better)
Translates to: LSSIDLLCNALL*VGHGFQLASCI
Trigger: AATGCAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp AATCTGCTCTTCTCCTTCCGGTCCACCATTTGGATCTaGAAGCCAGTTCTGAGCAGCATCGATCTTCTTTGC +
Preference number: 3 (lower is better)
Translates to: NLLFSFRSTIWI*KPVLSSIDLLC
Trigger: GCAAAGAAGATCGATGCTGCTCAGAACTGGCTTGCAGATCCAAATGGTGGACCGGAAGGAGAAGAGCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp TCATCCACTGTGGGATTATCAATCCACCGCTGTGCTTaGTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: SSTVGLSIHRCA*SILPSRCTAAL
Trigger: CAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTaGTTGGCAACCTCCTTGGCCAACCGAGTCACCTCA +
Preference number: 3 (lower is better)
Translates to: CKRLVLIRLSVH*LATSLANRVTS
Trigger: TGAGGTGACTCGGTTGGCCAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp CACATTCGATGTTGGGAACTAACACACAGCGATGGGTaGGAAGGAAGGATGTTCAGGCAAGGTTCTTACTCC +
Preference number: 3 (lower is better)
Translates to: HIRCWELTHSDG*EGRMFRQGSYS
Trigger: GGAGTAAGAACCTTGCCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CAA 90 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTTGATCTCCCTGCGTTCTTaGCCTGCACAGAGTTCACCA +
Preference number: 3 (lower is better)
Translates to: CKRLVLIRLSVHCLATSLISLRS*PAQSSP
Trigger: TGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGAT...CAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp GAGTCATGGCCTCCTGCATCCGAGCTTTTAGATCCTTTAAGGAGTCTTGGAGCTATCTGCCCTAGCATTTaGCAAGTTCCCAGAATCTCC +
Preference number: 3 (lower is better)
Translates to: ESWPPASELLDPLRSLGAICPSI*QVPRIS
Trigger: GGAGATTCTGGGAACTTGCAAAATGCTAGGGCAGAT...AGCTCCAAGACTCCTTAAAGGATCTAAAAGCTCGGATGCAGGAGGCCATGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp CGATATCCTGAGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGAAATGTTTCCAGCATCCAACAGAGATTaGGTATCAATGGCTTCGTCC +
Preference number: 3 (lower is better)
Translates to: RYPESRKLFCSPGSEMFPASNRD*VSMASS
Trigger: GGACGAAGCCATTGATACCAAATCTCTGTTGGATGC...TGGAAACATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp TCTGCCCTAGCATTTTGCAAGTTCCCAGAATCTCCCTaGGTTCTTTGCCTGCACAGAGTTCACCAACTTTTC +
Preference number: 3 (lower is better)
Translates to: SALAFCKFPESP*VLCLHRVHQLF
Trigger: GAAAAGTTGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGATTCTGGGAACTTGCAAAATGCTAGGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp ACAAGGGCAGAGCAGAGTGTCTGGCTAGTGTTCACTTaGATTCTGAGCTTATGTGAAGTCCATGGGCTAGAA +
Preference number: 3 (lower is better)
Translates to: TRAEQSVWLVFT*ILSLCEVHGLE
Trigger: TTCTAGCCCATGGACTTCACATAAGCTCAGAATCCAAGTGAACACTAGCCAGACACTCTGCTCTGCCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CCA 72 bp GCAATTTTCTTCTTAGTAACTGATTTGCCTGGGCCCTaGGTCTTGGGATTCTGGAAGAGTGAATGGGAGCCA +
Preference number: 3 (lower is better)
Translates to: AIFFLVTDLPGP*VLGFWKSEWEP
Trigger: TGGCTCCCATTCACTCTTCCAGAATCCCAAGACCCAGGGCCCAGGCAAATCAGTTACTAAGAAGAAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CCA 72 bp CAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTTaGTCATGGCTTCCAGCTTGCGAGCTGCATTTTCCA +
Preference number: 3 (lower is better)
Translates to: QHRSSLQCSALS*SWLPACELHFP
Trigger: TGGAAAATGCAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR GCA 72 bp ACTGTTTCATCCAGCTGCTTTCTGCCTGTTAACCTTTaGCACTTCCATTCCTTCAAGTGTGTAATCCCCAGG +
Preference number: 3 (lower is better)
Translates to: TVSSSCFLPVNL*HFHSFKCVIPR
Trigger: CCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAAAGGTTAACAGGCAGAAAGCAGCTGGATGAAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR GCA 72 bp GCATTTTGCAAGTTCCCAGAATCTCCCTGCGTTCTTTaGCTGCACAGAGTTCACCAACTTTTCCAGCTTCAT +
Preference number: 3 (lower is better)
Translates to: AFCKFPESPCVL*LHRVHQLFQLH
Trigger: ATGAAGCTGGAAAAGTTGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGATTCTGGGAACTTGCAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CCA 72 bp TGTACACATTCGATGTTGGGAACTAACACACAGCGATaGGTGGGAAGGAAGGATGTTCAGGCAAGGTTCTTA +
Preference number: 3 (lower is better)
Translates to: CTHSMLGTNTQR*VGRKDVQARFL
Trigger: TAAGAACCTTGCCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CCA 72 bp AGCAAGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTaGTACTCCTACAAACTTAACAACTTTAGCTTTTCG +
Preference number: 3 (lower is better)
Translates to: SKSLSCSRGKDL*YSYKLNNFSFS
Trigger: CGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR CCA 72 bp CGATCTTCTTTGCAATGCTCTGCTTTGAGTTGGTCATaGCTTCCAGCTTGCGAGCTGCATTTTCCACTTTTG +
Preference number: 3 (lower is better)
Translates to: RSSLQCSALSWS*LPACELHFPLL
Trigger: CAAAAGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR-3UTR CAA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACAAAGCTCAAAACAATTTaGGGAGGCACAGCAATTTTC +
Preference number: 3 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTKLKTI*GGTAIF
Trigger: GAAAATTGCTGTGCCTCCCAAAATTGTTTTGAGCTT...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR-3UTR CAA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTAAGCTCAAAACAATTTaGGGAGGCACAGCAATTTTC +
Preference number: 3 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVKLKTI*GGTAIF
Trigger: GAAAATTGCTGTGCCTCCCAAAATTGTTTTGAGCTT...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CAA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGAAACCCATTACTCTCTaGAACCCCATACTTGGGAGT +
Preference number: 3 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWKPITL*NPILGS
Trigger: ACTCCCAAGTATGGGGTTCAAGAGAGTAATGGGTTT...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CAA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATGGAAGGAAGGTATGGTaGGCAGCAACATGGAAAGCT +
Preference number: 3 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDGRKVW*AATWKA
Trigger: AGCTTTCCATGTTGCTGCCAACCATACCTTCCTTCC...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR-3UTR CAA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATTCCCTAGCACAGACATaGCTCAGGGGCATGGTAAAA +
Preference number: 3 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDSLAQT*LRGMVK
Trigger: TTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGA...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR GCA 72 bp AATAAGTACCAAAAAGGAAACACTGCCCTCTCATTTTaGCTAGTAGGAACTTACTGTGGTGATAAGAAATAT +
Preference number: 3 (lower is better)
Translates to: NKYQKGNTALSF*LVGTYCGDKKY
Trigger: ATATTTCTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTTTTGGTACTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp GAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCCCGGACGAGGTTGCTaGCGGCCGCCTGCACGGCGG +
Preference number: 4 (lower is better)
Translates to: EAAFTASRNLGSSEFSTSPGRGC*RPPARR
Trigger: CCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGG...GGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 72 bp TTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTaGGTCTGCAGGTTCTGCAGGGCCGTGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LAGLLLATARLV*VCRFCRAVATC
Trigger: ACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTACCCGGACGAGGTTGCTaGCGGCCGCCTGCACGGCGG +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLPGRGC*RPPARR
Trigger: CCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGG...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AAGCCCCCGGATGGCAGCCTGACCGACTCCACGGTCATCCACTGTGGGATTATCACCCACCTCAGCGGCTaGGATGCCCGGCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KPPDGSLTDSTVIHCGIITHLSG*DARLAG
Trigger: TCCAGCAAGCCGGGCATCCCAGCCGCTGAGGTGGGT...GATAATCCCACAGTGGATGACCGTGGAGTCGGTCAGGCTGCCATCCGGGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp CCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGACTCGGTGCTCCTGGTaGGTGAGCTCCTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PQGVQLLWPVCCWPQPGWTRCSW*VSSCCL
Trigger: GAGACAGCAGGAGCTCACTCACCAGGAGCACCGAGT...CCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp GGTACCACTGCCCCCTCTTACCAGCCGAGACATCTCAGCCATCAGCAGAGCCATCCTCAGCGGCTGGGATaGCCGGCTTGCTGGACCATT +
Preference number: 4 (lower is better)
Translates to: GTTAPSYQPRHLSHQQSHPQRLG*PACWTI
Trigger: AATGGTCCAGCAAGCCGGGCATCCCAGCCGCTGAGG...ATGGCTCTGCTGATGGCTGAGATGTCTCGGCTGGTAAGAGGGGGCAGTGGTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAATCCAGGCCCCCATATaGTGGGGCTCCACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSIQAPI*WGSTEA
Trigger: GGCCTCTGTGGAGCCCCAGCATATGGGGGCCTGGAT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GGTACCACTGCCCCCTCTTACCAGCCGAGACATCTCAGCCATCAGCAGAGCCATCCGTGGCCACCTGTTTaGCCAAGGCTCGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GTTAPSYQPRHLSHQQSHPWPPV*PRLEPL
Trigger: CAGAGGCTCGAGCCTTGGCCAAACAGGTGGCCACGG...ATGGCTCTGCTGATGGCTGAGATGTCTCGGCTGGTAAGAGGGGGCAGTGGTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTCCACAAGCCCCCGGATaGCAGCCTGACCGACTCCAC +
Preference number: 4 (lower is better)
Translates to: KVYSCFGRSAVGHSPVGFPQAPG*QPDRLH
Trigger: GTGGAGTCGGTCAGGCTGCCATCCGGGGGCTTGTGG...AAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp CTCATCAAATACCTCTTCCCTGTTAGGCGCATCAGGAGGCGCCGTGGCTGCCACGCCAGGTCAGCCAGCTaGGCTGTCAGCTGGTCCACT +
Preference number: 4 (lower is better)
Translates to: LIKYLFPVRRIRRRRGCHARSAS*AVSWST
Trigger: AGTGGACCAGCTGACAGCCCAGCTGGCTGACCTGGC...GTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGGGAAGAGGTATTTGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AAGCCCCCGGATGGCAGCCTGACCGACTCCACGGTCATCCACTGTGGGATTATCCCAGCAGGATCCGGTTaGCCCGACGAGCAATACTGG +
Preference number: 4 (lower is better)
Translates to: KPPDGSLTDSTVIHCGIIPAGSG*PDEQYW
Trigger: CCAGTATTGCTCGTCGGGCCAACCGGATCCTGCTGG...GATAATCCCACAGTGGATGACCGTGGAGTCGGTCAGGCTGCCATCCGGGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AACATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCTTGTTCAAGGTCTGGTaGAGGCGGCGGGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: NISQTMPFGHKPPDGSLTLFKVW*RRREVR
Trigger: CCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAA...GGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAATGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCGACATCCTTTTCCTCTGGTaGTGGAGGCCTAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ISQTMPFGHKPPDGSLTDILFLW*WRPRWR
Trigger: CCTCCACCTAGGCCTCCACCACCAGAGGAAAAGGAT...GTCGGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCGACGCTTGGCAACCTCCTTaGCCAACCGAGTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: ISQTMPFGHKPPDGSLTDAWQPP*PTESPH
Trigger: ATGAGGTGACTCGGTTGGCCAAGGAGGTTGCCAAGC...GTCGGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 72 bp TTCTCCACCTCCCTCTTAGCCACCAGCAGGATCCGGTaGGCCCGACGAGCAATACTGGTTGCCCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: FSTSLLATSRIR*ARRAILVAPAT
Trigger: GGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCCAACCGGATCCTGCTGGTGGCTAAGAGGGAGGTGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCCCGGACGAGGTTGCTaGCGGCCGCCTGCACGGCGG +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVPGRGC*RPPARR
Trigger: CCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGG...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCACTCGGTGCTCCTGGTaGGTGAGCTCCTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFTRCSW*VSSCCL
Trigger: GAGACAGCAGGAGCTCACTCACCAGGAGCACCGAGT...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAACTCGGTGCTCCTGGTaGGTGAGCTCCTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSTRCSW*VSSCCL
Trigger: GAGACAGCAGGAGCTCACTCACCAGGAGCACCGAGT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp GAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTGCATGGCCACCGGTaGGGATCCTTGTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EAAFTASRNLGSSEFSTSLHGHR*GSLSSG
Trigger: GCCAGAGGACAAGGATCCTCACCGGTGGCCATGCAG...GGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCACCACCGGCTCCAGGATaGTCTCGATCGTGCGCGTAT +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSPPAPG*SRSCAY
Trigger: ATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGG...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp GAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCACCAGGTGGGAGATCTaGTGTGCCACCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EAAFTASRNLGSSEFSTSTRWEI*CATGSR
Trigger: CCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGT...GGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAAGGAGGCGCCGTGGCTaGCACTGCCAACAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSRRRRG*HCQQLD
Trigger: ATCAAGCTGTTGGCAGTGGCAGCCACGGCGCCTCCT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCACCAGGCTCAGCCAGGTaGCTACTGGTACCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSPGSAR*LLVPGS
Trigger: ACTCCCTGGTACCAGTAGGCACCTGGCTGAGCCTGG...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCTGGCCGGTCTGCTGTTaGCCACAGCCCGGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFWPVCC*PQPGWF
Trigger: AAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCA...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GGTACCACTGCCCCCTCTTACCAGCCGAGACATCTCAGCCATCAGCAGAGCCATTGGCCGGTCTGCTGTTaGCCACAGCCCGGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GTTAPSYQPRHLSHQQSHWPVCC*PQPGWF
Trigger: AAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCA...ATGGCTCTGCTGATGGCTGAGATGTCTCGGCTGGTAAGAGGGGGCAGTGGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATCCGGCCCAGCATGGTaGCCTTCACTGTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSSGPAW*PSLWTG
Trigger: TCCTGTCCACAGTGAAGGCCACCATGCTGGGCCGGA...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CAA 72 bp CCCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTaGGCCACAGCCCGGTTGGTTTTGGTCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PSRCTAALAGLL*ATARLVLVCRF
Trigger: GAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 72 bp CCAGCAGGATCCGGTTGGCCCGACGAGCAATACTGGTaGCCCCAGCAACCAGCATCTGAGGCTGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: PAGSGWPDEQYW*PQQPASEAECW
Trigger: CCAACATTCAGCCTCAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCCAACCGGATCCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AGGGTCACGGAGCCAACCTTTGGCCTGGTTCAGTTTGGAGTCTATGGAGGCCAAGCAAGTGCTCGTGCCTaGGGACTCTCCCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: RVTEPTFGLVQFGVYGGQASARA*GLSPSP
Trigger: AGGGGAAGGGGAGAGTCCTCAGGCACGAGCACTTGC...TTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp ATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCGACGTCTTCACTGAGGCCTaGATGCCTTCCACTGTTGAT +
Preference number: 4 (lower is better)
Translates to: ISQTMPFGHKPPDGSLTDVFTEA*MPSTVD
Trigger: ATCAACAGTGGAAGGCATTCAGGCCTCAGTGAAGAC...GTCGGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCACCAGAATGGGCTGGTTaGCCGGCTGATTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSPEWAG*PADWMA
Trigger: TGCCATCCAATCAGCCGGTCAACCAGCCCATTCTGG...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR TCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCACCTTGGCACACTGAATaGGTGCCCGCTTGGTACCAC +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSPWHTE*VPAWYH
Trigger: GTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGG...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCCCGAGTCACCTCATCTaGGGCCTTGGCGATGTCCTT +
Preference number: 4 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFPSHLI*GLGDVL
Trigger: AAGGACATCGCCAAGGCCTCAGATGAGGTGACTCGG...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCGACTCCACCATTTGGATCTaGAAGCCAGTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ISQTMPFGHKPPDGSLTDSTIWI*KPVLSS
Trigger: GCTGCTCAGAACTGGCTTGCAGATCCAAATGGTGGA...GTCGGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCACATTAGCCAGACGATaGCCTTCGGCCACAAGCCCC +
Preference number: 4 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFTLARR*PSATSP
Trigger: GGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAATGT...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAACACCCTGGCTACTCTaGCCTTCCAGTGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSTPWLL*PSSGRE
Trigger: CTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGTGT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAGCGCGTATGAAACACTaGCATCGCGGCGGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRARMKH*HRGGER
Trigger: CCGCTCGCCGCCGCGATGCCAGTGTTTCATACGCGC...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TGTTTGGCCAAGGCTCGAGCCTCTGGAGAATCTCCTTTCCCCTGTCTTCGTAGAGCGCGTATGAAACACTaGCATCGCGGCGGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: CLAKARASGESPFPCLRRARMKH*HRGGER
Trigger: CCGCTCGCCGCCGCGATGCCAGTGTTTCATACGCGC...TCTACGAAGACAGGGGAAAGGAGATTCTCCAGAGGCTCGAGCCTTGGCCAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp TTAGTCGGAGTTGTTCAAGGTCTGGTGGAGGCGGCGGGAAGTCAGGCTCCTGAGGGTGTACAGCTGCTTTaGCCGGTCTGCTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LVGVVQGLVEAAGSQAPEGVQLL*PVCCWP
Trigger: TGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACC...CTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAACTCCGACTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGCAGGCCCCCATATGCTaGGGCTCCACAGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVQAPIC*GSTEAT
Trigger: GGTGGCCTCTGTGGAGCCCCAGCATATGGGGGCCTG...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGACGGGAGTGGCCCTGCTaGGAAGATGGCAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRREWPC*EDGRAT
Trigger: TGTGGCCCTGCCATCTTCCCAGCAGGGCCACTCCCG...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TTAGTCGGAGTTGTTCAAGGTCTGGTGGAGGCGGCGGGAAGTCAGGCTCCTGAGAAGGAGTCTTGGAGCTaGGATGCAAGTGCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: LVGVVQGLVEAAGSQAPEKESWS*DASARA
Trigger: GGCACGAGCACTTGCATCTCAGCTCCAAGACTCCTT...CTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAACTCCGACTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCCCACTGCCAACAGCTTaGTGGGAGTTGTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFPLPTA*WELWYR
Trigger: GCGATACCACAACTCCCATCAAGCTGTTGGCAGTGG...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGCAGGATCCGATATCCTaGGTCCAGGAAGCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PQGVQLLWPVCCWPQPGWQDPIS*VQEALL
Trigger: CAAAAGAGCTTCCTGGACTCAGGATATCGGATCCTG...CCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp GGCCCGACGAGCAATACTGGTTGCCCCAGCAACCAGCATCTGAGGCTGAATGTTCCAGAATGGGCTGGTTaGCCGGCTGATTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: GPTSNTGCPSNQHLRLNVPEWAG*PADWMA
Trigger: TGCCATCCAATCAGCCGGTCAACCAGCCCATTCTGG...AACATTCAGCCTCAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp CTCATCAAATACCTCTTCCCTGTTAGGCGCATCAGGAGGCGCCGTGGCTGCCACAGATGCAAGTGCTCGTaGCTGAGGACTCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LIKYLFPVRRIRRRRGCHRCKCS*LRTLPF
Trigger: GAAGGGGAGAGTCCTCAGGCACGAGCACTTGCATCT...GTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGGGAAGAGGTATTTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTACCTCAGCGGCTGGGATaGCCGGCTTGCTGGACCATT +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLPQRLG*PACWTI
Trigger: AATGGTCCAGCAAGCCGGGCATCCCAGCCGCTGAGG...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR CCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCCTTCAGTGTCCTTGCTaGCCCAGGCATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFLQCPC*PRHLHP
Trigger: GGGATGAAGATGCCTGGGCCAGCAAGGACACTGAAG...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TTAGTCGGAGTTGTTCAAGGTCTGGTGGAGGCGGCGGGAAGTCAGGCTCCTGAGGCTGAGCTTTCTGCATaGCCACCGGTGAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: LVGVVQGLVEAAGSQAPEAELSA*PPVRIL
Trigger: AAGGATCCTCACCGGTGGCCATGCAGAAAGCTCAGC...CTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAACTCCGACTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AAGCCCCCGGATGGCAGCCTGACCGACTCCACGGTCATCCACTGTGGGATTATCGCTTTGAGTTGGTCATaGCTTCCAGCTTGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: KPPDGSLTDSTVIHCGIIALSWS*LPACEL
Trigger: CAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGC...GATAATCCCACAGTGGATGACCGTGGAGTCGGTCAGGCTGCCATCCGGGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTACCGTGGCCACCTGTTTaGCCAAGGCTCGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLPWPPV*PRLEPL
Trigger: CAGAGGCTCGAGCCTTGGCCAAACAGGTGGCCACGG...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACCCCGACGAGCAATACTaGTTGCCCCAGCAACCAGCA +
Preference number: 4 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYPDEQY*LPQQPA
Trigger: TGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGG...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGCAGGATTCCGGCCCAGCATGGTaGCCTTCACTGTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: TELGILGILHLPLSHQQDSGPAW*PSLWTG
Trigger: TCCTGTCCACAGTGAAGGCCACCATGCTGGGCCGGA...ATCCTGCTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 72 bp TCCCCTGGGGAGGCACTAGGGTCACGGAGCCAACCTTaGGCCTGGTTCAGTTTGGAGTCTATGGAGGCCAAT +
Preference number: 4 (lower is better)
Translates to: SPGEALGSRSQP*AWFSLESMEAN
Trigger: ATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGACCCTAGTGCCTCCCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 72 bp GCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTaGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: ACSILPSRCTAA*AGLLLATARLV
Trigger: AACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCCTGCATGGCCACCGGTaGGGATCCTTGTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLLHGHR*GSLSSG
Trigger: GCCAGAGGACAAGGATCCTCACCGGTGGCCATGCAG...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCGCAAGTGCTCGTGCCTaGGGACTCTCCCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLASARA*GLSPSP
Trigger: AGGGGAAGGGGAGAGTCCTCAGGCACGAGCACTTGC...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGATCGGGCCGTCTTCACTaGGGCCTGAATGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRSGRLH*GLNAFH
Trigger: GTGGAAGGCATTCAGGCCTCAGTGAAGACGGCCCGA...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACGGCTGGTTGACCGGCTaGTTGGATGGCATTAACAGC +
Preference number: 4 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYGWLTG*LDGINS
Trigger: GCTGTTAATGCCATCCAATCAGCCGGTCAACCAGCC...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp TTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCTCCCGATGCAAGGACTaGGCCGCGGCCAGAATGGGC +
Preference number: 4 (lower is better)
Translates to: LRASSWSCLAAIIIGWLISRCKD*AAARMG
Trigger: GCCCATTCTGGCCGCGGCTCAGTCCTTGCATCGGGA...GATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp CGGCTTGCTGGACCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCCGAGTCACCTCATCTaGGGCCTTGGCGATGTCCTT +
Preference number: 4 (lower is better)
Translates to: RLAGPFASFIMELSGSHHPSHLI*GLGDVL
Trigger: AAGGACATCGCCAAGGCCTCAGATGAGGTGACTCGG...ATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp TTAGTCGGAGTTGTTCAAGGTCTGGTGGAGGCGGCGGGAAGTCAGGCTCCTGAGTGGCTTCAGTGTCCTTaGTGGCCCAGGCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: LVGVVQGLVEAAGSQAPEWLQCP*WPRHLH
Trigger: ATGAAGATGCCTGGGCCAGCAAGGACACTGAAGCCA...CTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAACTCCGACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGTTGGTCTGCAGGTTCTaGAGGGCCGTGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVLVCRF*RAVATC
Trigger: ACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAA...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACGTCTTGGAGCTGAGATaGAAGTGCTCGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYVLELR*KCSCLR
Trigger: CCTCAGGCACGAGCACTTGCATCTCAGCTCCAAGAC...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp TTAGTCGGAGTTGTTCAAGGTCTGGTGGAGGCGGCGGGAAGTCAGGCTCCTGAGACGAGCAATACTGGTTaGCCCAGCAACCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: LVGVVQGLVEAAGSQAPETSNTG*PSNQHL
Trigger: CAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGT...CTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAACTCCGACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCACCTCCCCGGCCTTCTaGTCAGGGAACTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: RGSFHSLTELGILGILHLTSPAF*SGNSSS
Trigger: GGATGAAGAGTTCCCTGAGCAGAAGGCCGGGGAGGT...GAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp CGGCTTGCTGGACCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATGGCACACTGAATGAGTaGCCGCTTGGTACCACTGCC +
Preference number: 4 (lower is better)
Translates to: RLAGPFASFIMELSGSHHGTLNE*PLGTTA
Trigger: GGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCC...ATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp CTCATCAAATACCTCTTCCCTGTTAGGCGCATCAGGAGGCGCCGTGGCTGCCACAGCATCTCTGTGGCCTaGTCAGACTCCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: LIKYLFPVRRIRRRRGCHSISVA*SDSSSL
Trigger: CAGTGATGAGGAGTCTGAGCAGGCCACAGAGATGCT...GTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGGGAAGAGGTATTTGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTTGCCGGGAGTGGCCCTaGTGGGAAGATGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVCREWP*WEDGRA
Trigger: GGCCCTGCCATCTTCCCAGCAGGGCCACTCCCGGCA...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGGCGCGTATGAAACACTaGCATCGCGGCGGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRARMKH*HRGGER
Trigger: CCGCTCGCCGCCGCGATGCCAGTGTTTCATACGCGC...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAACACTTCCTGAGTCATaGCCTCCTGCATCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSTLPES*PPASEL
Trigger: AAGCTCGGATGCAGGAGGCCATGACTCAGGAAGTGT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CGGCTTGCTGGACCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATGAGTTGTTCAAGGTCTaGTGGAGGCGGCGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RLAGPFASFIMELSGSHHELFKV*WRRREV
Trigger: GACTTCCCGCCGCCTCCACCAGACCTTGAACAACTC...ATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTGCCATCATCATTGGCTaGTTAATCACCTCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: KVYSCFGRSAVGHSPVGFAIIIG*LITSPA
Trigger: GGCCGGGGAGGTGATTAACCAGCCAATGATGATGGC...AAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATTGCGAGCTTCATCATaGAGCTGTCTGGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSLRASS*SCLAAI
Trigger: GATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAGAACCAGCATCTCTGTaGCCTGCTCAGACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSEPASL*PAQTPH
Trigger: ATGAGGAGTCTGAGCAGGCCACAGAGATGCTGGTTC...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAACACACAGCGATGGGTaGGAAGGAAGGATGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSTHSDG*EGRMFR
Trigger: CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CAGGCAGAGGTGGTTTGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAATCGATCGTGCGCGTATaGAACACTGGCATCGCGGCG +
Preference number: 4 (lower is better)
Translates to: QAEVVWEEQAHLLVGVVQSIVRV*NTGIAA
Trigger: CGCCGCGATGCCAGTGTTTCATACGCGCACGATCGA...TTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp TCAATCCACCGCTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGGGTGCTCCTGGTGAGTaGGCTCCTGCTGTCTCTCGT +
Preference number: 4 (lower is better)
Translates to: SIHRCACSILPSRCTAALGAPGE*APAVSR
Trigger: ACGAGAGACAGCAGGAGCTCACTCACCAGGAGCACC...CAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATTTCCACTTTTGCTGTaGGCACATCCAGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSFPLLL*AHPDPE
Trigger: CTCAGGGTCTGGATGTGCTCACAGCAAAAGTGGAAA...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CAGGCAGAGGTGGTTTGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAATCGGGCCGTCTTCACTaGGGCCTGAATGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: QAEVVWEEQAHLLVGVVQSGRLH*GLNAFH
Trigger: GTGGAAGGCATTCAGGCCTCAGTGAAGACGGCCCGA...TTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCAGACCACCTGGGGTGTaGGTTCTCGGGCCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLRPPGV*VLGPSS
Trigger: TGAAGACGGCCCGAGAACTCACACCCCAGGTGGTCT...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTTCCCGATGCAAGGACTaGGCCGCGGCCAGAATGGGC +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVSRCKD*AAARMG
Trigger: GCCCATTCTGGCCGCGGCTCAGTCCTTGCATCGGGA...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR TCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGCCTTGGCACACTGAATaGGTGCCCGCTTGGTACCAC +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVPWHTE*VPAWYH
Trigger: GTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGG...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACATGTCCTTGGCACACTaGATGAGTGCCCGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYMSLAH*MSARLV
Trigger: TACCAAGCGGGCACTCATTCAGTGTGCCAAGGACAT...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp GGTACCACTGCCCCCTCTTACCAGCCGAGACATCTCAGCCATCAGCAGAGCCATCTGTGGACAGGATTTTaGGCTGGGTGCTTATGGTTG +
Preference number: 4 (lower is better)
Translates to: GTTAPSYQPRHLSHQQSHLWTGF*AGCLWL
Trigger: CAACCATAAGCACCCAGCTCAAAATCCTGTCCACAG...ATGGCTCTGCTGATGGCTGAGATGTCTCGGCTGGTAAGAGGGGGCAGTGGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAGCCCCCATTCCTTTCTaGTGTGCCAGGCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLAPIPF*CARPGC
Trigger: ACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGC...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTCTGAAGCATCTGAGCTaGCTGGACAAGCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: KVYSCFGRSAVGHSPVGFLKHLS*LDKLGA
Trigger: TGCACCAAGCTTGTCCAGGCAGCTCAGATGCTTCAG...AAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCACATGCGCTTGGCTGCTaGAATGATGTCATTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSHALGC*NDVIAL
Trigger: AAGGGCAATGACATCATTGCAGCAGCCAAGCGCATG...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CTCATCAAATACCTCTTCCCTGTTAGGCGCATCAGGAGGCGCCGTGGCTGCCACCATGCGCTTGGCTGCTaGAATGATGTCATTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LIKYLFPVRRIRRRRGCHHALGC*NDVIAL
Trigger: AAGGGCAATGACATCATTGCAGCAGCCAAGCGCATG...GTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGGGAAGAGGTATTTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAGGCACACTGAATGAGTaGCCGCTTGGTACCACTGCC +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRGTLNE*PLGTTA
Trigger: GGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCC...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTCGTTTATCTGTGCACTaGTTGGCAACCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KVYSCFGRSAVGHSPVGFRLSVH*LATSLA
Trigger: GGCCAAGGAGGTTGCCAAGCAGTGCACAGATAAACG...AAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGCTCACCAGCATCCCCTaGGGAGGCACTAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRLTSIP*GGTRVT
Trigger: CGTGACCCTAGTGCCTCCCCAGGGGATGCTGGTGAG...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGGTCACGGAGCCAACCTTTGGCCTGGTTCAGTTTGGAGTCTATGGAGGCCAACAAGGCTCGAGCCTCTaGAGAATCTCCTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RVTEPTFGLVQFGVYGGQQGSSL*RISFPL
Trigger: CAGGGGAAAGGAGATTCTCCAGAGGCTCGAGCCTTG...TTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGGGTTCTGCAGGGCCGTaGCCACCTGTTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRGSAGP*PPVWPR
Trigger: CCTTGGCCAAACAGGTGGCCACGGCCCTGCAGAACC...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGCAGCCCGGTTGGTTTTaGTCTGCAGGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVQPGWF*SAGSAG
Trigger: CCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTG...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTACAGCCCGGTTGGTTTTaGTCTGCAGGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLQPGWF*SAGSAG
Trigger: CCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTG...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GGCCCGACGAGCAATACTGGTTGCCCCAGCAACCAGCATCTGAGGCTGAATGTTCCACTCGGTCACACTTaGCGAGAAGATCTTGCCGAT +
Preference number: 4 (lower is better)
Translates to: GPTSNTGCPSNQHLRLNVPLGHT*REDLAD
Trigger: ATCGGCAAGATCTTCTCGCCAAGTGTGACCGAGTGG...AACATTCAGCCTCAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp CTGCTGTCTCTCGTCAATCATCTTGGCCATCTTAGTCATTCCTGGCCCAAGATTGCAGCCGAGACCACCTaGGGTGTGAGTTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLSLVNHLGHLSHSWPKIAAETT*GVSSRA
Trigger: GGCCCGAGAACTCACACCCCAGGTGGTCTCGGCTGC...AATCTTGGGCCAGGAATGACTAAGATGGCCAAGATGATTGACGAGAGACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp TCAGTGTCCTTGCTGGCCCAGGCATCTTCATCCCAAGAGGTGAGTTGTAACACATGGTGGAGGCCTAGGTaGAGGGACCTCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVSLLAQASSSQEVSCNTWWRPR*RDLTFR
Trigger: CCTGAAGGTGAGGTCCCTCCACCTAGGCCTCCACCA...TGTGTTACAACTCACCTCTTGGGATGAAGATGCCTGGGCCAGCAAGGACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTACTTTTCCTCTGGTGGTaGAGGCCTAGGTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLLFLWW*RPRWRD
Trigger: GTCCCTCCACCTAGGCCTCCACCACCAGAGGAAAAG...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GGCCCGACGAGCAATACTGGTTGCCCCAGCAACCAGCATCTGAGGCTGAATGTTTTCATCCTTTTCCTCTaGTGGTGGAGGCCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPTSNTGCPSNQHLRLNVFILFL*WWRPRW
Trigger: CCACCTAGGCCTCCACCACCAGAGGAAAAGGATGAA...AACATTCAGCCTCAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACTTGCGAGCTTCATCATaGAGCTGTCTGGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYLRASS*SCLAAI
Trigger: GATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGCAGGATCCTCATCTGAGGCCTTaGCGATGTCCTTGGCACACT +
Preference number: 4 (lower is better)
Translates to: TELGILGILHLPLSHQQDPHLRP*RCPWHT
Trigger: AGTGTGCCAAGGACATCGCCAAGGCCTCAGATGAGG...ATCCTGCTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGATGGAGTGCCGGGAGTaGCCCTGCTGGGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRMECRE*PCWEDG
Trigger: GCCATCTTCCCAGCAGGGCCACTCCCGGCACTCCAT...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CAA 72 bp CGGCCCAGCATGGTGGCCTTCACTGTGGACAGGATTTaGAGCTGGGTGCTTATGGTTGGGATTCGCTCACAT +
Preference number: 4 (lower is better)
Translates to: RPSMVAFTVDRI*SWVLMVGIRSH
Trigger: ATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCATGCTGGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGTCGATCGTGCGCGTATaGAACACTGGCATCGCGGCG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRSIVRV*NTGIAA
Trigger: CGCCGCGATGCCAGTGTTTCATACGCGCACGATCGA...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGGGTGCTCCTGGTGAGTaGGCTCCTGCTGTCTCTCGT +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRGAPGE*APAVSR
Trigger: ACGAGAGACAGCAGGAGCTCACTCACCAGGAGCACC...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACAGGTGCTCCTGGTGAGTaGGCTCCTGCTGTCTCTCGT +
Preference number: 4 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTGAPGE*APAVSR
Trigger: ACGAGAGACAGCAGGAGCTCACTCACCAGGAGCACC...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR TCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCTGCATGGCCACCGGTaGGGATCCTTGTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVLHGHR*GSLSSG
Trigger: GCCAGAGGACAAGGATCCTCACCGGTGGCCATGCAG...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAGCTTGGCTGCTGCAATaGTGTCATTGCCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLAWLLQ*CHCPCW
Trigger: CCAGCAAGGGCAATGACATCATTGCAGCAGCCAAGC...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGACCAGGTGGGAGATCTaGTGTGCCACCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRTRWEI*CATGSR
Trigger: CCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp GAGTCATGGCCTCCTGCATCCGAGCTTTTAGATCCTTTAAGGAGTCTTGGAGCTGGTCAGGAATGGCTTTaGCGTCCACCTCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ESWPPASELLDPLRSLGAGQEWL*RPPRPP
Trigger: AGGAGGGCGAGGTGGACGGCAAAGCCATTCCTGACC...AGCTCCAAGACTCCTTAAAGGATCTAAAAGCTCGGATGCAGGAGGCCATGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp TTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCTTGGTCTGCAGGTTCTaGAGGGCCGTGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LRASSWSCLAAIIIGWLILVCRF*RAVATC
Trigger: ACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAA...GATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGGTGCTTGCTCAATCTTaGCCTCAAGGTGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: SLTELGILGILHLPLSHQVLAQS*PQGVQL
Trigger: CAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCAC...CTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGAGATGCAAGTGCTCGTaGCTGAGGACTCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVRCKCS*LRTLPF
Trigger: GAAGGGGAGAGTCCTCAGGCACGAGCACTTGCATCT...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAGAGCTGAGATGCAAGTaGTCGTGCCTGAGGACTCTC +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRELRCK*SCLRTL
Trigger: GAGAGTCCTCAGGCACGAGCACTTGCATCTCAGCTC...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAGAGCTGAGATGCAAGTaGTCGTGCCTGAGGACTCTC +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLELRCK*SCLRTL
Trigger: GAGAGTCCTCAGGCACGAGCACTTGCATCTCAGCTC...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTAGGAGGCGCCGTGGCTaGCACTGCCAACAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: MVAFTVDRILSWVLMVGIRRRRG*HCQQLD
Trigger: ATCAAGCTGTTGGCAGTGGCAGCCACGGCGCCTCCT...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATCGGGGAGATGGTTTTaGTCAATTCATCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSSGRWF*SIHQRQ
Trigger: CTGCCTCTGATGAATTGAGCAAAACCATCTCCCCGA...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGGGTCACGGAGCCAACCTTTGGCCTGGTTCAGTTTGGAGTCTATGGAGGCCAAAGCATCGGCCGCATCTaGCTCAGCTACAACACCTAT +
Preference number: 4 (lower is better)
Translates to: RVTEPTFGLVQFGVYGGQSIGRI*LSYNTY
Trigger: ATAGGTGTTGTAGCTGAGGCAGATGCGGCCGATGCT...TTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCGGCACACTGAATGAGTaGCCGCTTGGTACCACTGCC +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLGTLNE*PLGTTA
Trigger: GGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCC...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGATCCAGGCCCCCATATaGTGGGGCTCCACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRIQAPI*WGSTEA
Trigger: GGCCTCTGTGGAGCCCCAGCATATGGGGGCCTGGAT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATCCTTCAGACAGGGCTaGCTTGCCATTAAACACTCT +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSSFRQG*LAIKHS
Trigger: AGAGTGTTTAATGGCAAGGCAGCCCTGTCTGAAGGA...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCACATCCAGCTGCTTTCTaGCTGTTAACCTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSHPAAF*LLTFAT
Trigger: AGTGGCAAAGGTTAACAGGCAGAAAGCAGCTGGATG...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTACTTCAGTGTCCTTGCTaGCCCAGGCATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLLQCPC*PRHLHP
Trigger: GGGATGAAGATGCCTGGGCCAGCAAGGACACTGAAG...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACCCAATGCTCTCTTCATaGCTTCAGTGTCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYPMLSS*LQCPCW
Trigger: CCAGCAAGGACACTGAAGCCATGAAGAGAGCATTGG...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGCCGTGGCCACCTGTTTaGCCAAGGCTCGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRPWPPV*PRLEPL
Trigger: CAGAGGCTCGAGCCTTGGCCAAACAGGTGGCCACGG...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGGGTTCTGCAGGGCCGTaGCCACCTGTTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRGSAGP*PPVWPR
Trigger: CCTTGGCCAAACAGGTGGCCACGGCCCTGCAGAACC...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TGTTTGGCCAAGGCTCGAGCCTCTGGAGAATCTCCTTTCCCCTGTCTTCGTAGATGGCCACAGCCCGGTTaGTTTTGGTCTGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CLAKARASGESPFPCLRRWPQPG*FWSAGS
Trigger: AGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCA...TCTACGAAGACAGGGGAAAGGAGATTCTCCAGAGGCTCGAGCCTTGGCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCGGTGTACAGCTGCTTTaGCCGGTCTGCTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLGVQLL*PVCCWP
Trigger: TGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACC...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCACGGTCATCCACTGTaGGATTATCAATCCACCGCT +
Preference number: 4 (lower is better)
Translates to: EAAFTASRNLGSSEFSTSHGHPL*DYQSTA
Trigger: AGCGGTGGATTGATAATCCCACAGTGGATGACCGTG...GGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTGCCAGGTCAGCCAGCTaGGCTGTCAGCTGGTCCACT +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVARSAS*AVSWST
Trigger: AGTGGACCAGCTGACAGCCCAGCTGGCTGACCTGGC...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCCCCGACGAGCAATACTaGTTGCCCCAGCAACCAGCA +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLPDEQY*LPQQPA
Trigger: TGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGG...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTACAGGCAGAGGTGGTTTaGGAGGAGCAAGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLQAEVV*EEQAHL
Trigger: CAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGTGGTGGAGGCCTAGGTaGAGGGACCTCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRWWRPR*RDLTFR
Trigger: CCTGAAGGTGAGGTCCCTCCACCTAGGCCTCCACCA...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGGCCATCATCATTGGCTaGTTAATCACCTCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVAIIIG*LITSPA
Trigger: GGCCGGGGAGGTGATTAACCAGCCAATGATGATGGC...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CGGCTTGCTGGACCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATGGCAGCCATCATCATTaGCTGGTTAATCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: RLAGPFASFIMELSGSHHGSHHH*LVNHLP
Trigger: GGGGAGGTGATTAACCAGCCAATGATGATGGCTGCC...ATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAGGATGCCCGGCTTGCTaGACCATTTGCGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLGCPAC*TICELH
Trigger: ATGAAGCTCGCAAATGGTCCAGCAAGCCGGGCATCC...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR CCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGACCTCATCTGAGGCCTTaGCGATGTCCTTGGCACACT +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRPHLRP*RCPWHT
Trigger: AGTGTGCCAAGGACATCGCCAAGGCCTCAGATGAGG...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAGCTTGGCAACCTCCTTaGCCAACCGAGTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLAWQPP*PTESPH
Trigger: ATGAGGTGACTCGGTTGGCCAAGGAGGTTGCCAAGC...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTCTGGGTGCTTATGGTTaGGATTCGCTCACATACCTG +
Preference number: 4 (lower is better)
Translates to: KVYSCFGRSAVGHSPVGFLGAYG*DSLTYL
Trigger: CAGGTATGTGAGCGAATCCCAACCATAAGCACCCAG...AAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCGAAGGAAGGTATGGTTaGCAGCAACATGGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFEGRYG*QQHGKL
Trigger: GAGCTTTCCATGTTGCTGCCAACCATACCTTCCTTC...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCACAGGGAAGGAAGGTATaGTTGGCAGCAACATGGAAA +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSQGRKV*LAATWK
Trigger: TTTCCATGTTGCTGCCAACCATACCTTCCTTCCCTG...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAACTAACACACAGCGATaGGTGGGAAGGAAGGATGTT +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSTNTQR*VGRKDV
Trigger: AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCTTGGAATATGAAAAATaGACCTGTGTGGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFLEYEK*TCVAGR
Trigger: ACGCCCGGCCACACAGGTCCATTTTTCATATTCCAA...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR CAA 72 bp CCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTaGCCATTAAACACTCTTAGGGGACAAGCACTCCTC +
Preference number: 4 (lower is better)
Translates to: PLGRKCPSDRAA*PLNTLRGQALL
Trigger: GAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CAA 72 bp CTAGGGTCACGGAGCCAACCTTTGGCCTGGTTCAGTTaGGAGTCTATGGAGGCCAATGCTCTCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LGSRSQPLAWFS*ESMEANALFMA
Trigger: AGCCATGAAGAGAGCATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGACCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AGAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCATCTAAGATCTGTCTaGTGGCCTGCTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: RGSFHSLTELGILGILHLHLRSV*WPAHQH
Trigger: ATGCTGGTGAGCAGGCCATCAGACAGATCTTAGATG...GAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGCGGAGGTCAGCCACTTaGTCAGTCATCTGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRRRSAT*SVICPS
Trigger: GCTAGGGCAGATGACTGATCAAGTGGCTGACCTCCG...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATGCAAGTGCTCGTGCCTaGGGACTCTCCCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDASARA*GLSPSP
Trigger: AGGGGAAGGGGAGAGTCCTCAGGCACGAGCACTTGC...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAACATCTGACACTTCCTaGGTCATGGCCTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLTSDTS*VMASCI
Trigger: GATGCAGGAGGCCATGACTCAGGAAGTGTCAGATGT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCCCACTGCCAACAGCTTaGTGGGAGTTGTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLPLPTA*WELWYR
Trigger: GCGATACCACAACTCCCATCAAGCTGTTGGCAGTGG...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGCAGACTCCTCATCACTaGTGTTGGTCCGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRQTPHH*CWSGPA
Trigger: TGCTGGGCCGGACCAACATCAGTGATGAGGAGTCTG...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATGTTCGAATTTTGATTaGAGCAGCTTCAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSCSNFD*SSFSFP
Trigger: CGGGAAGCTGAAGCTGCTTCAATCAAAATTCGAACA...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp GTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCGCTCACATACCTGTACCTCGCCCTCCTCGTaGATTATCACCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VDRILSWVLMVGIRSHTCTSPSS*IITRWE
Trigger: CTCCCACCTGGTGATAATGCACGAGGAGGGCGAGGT...ACAGGTATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTGGTCAGGAATGGCTTTaGCGTCCACCTCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVGQEWL*RPPRPP
Trigger: AGGAGGGCGAGGTGGACGGCAAAGCCATTCCTGACC...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATGTTCCAGAGAGGATaGCCCTTGACCCATCAATTA +
Preference number: 4 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFMFQRG*PLTHQL
Trigger: TAATTGATGGGTCAAGGGGCATCCTCTCTGGAACAT...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGTTGGTCTGCAGGTTCTaGAGGGCCGTGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRLVCRF*RAVATC
Trigger: ACAGGTGGCCACGGCCCTGCAGAACCTGCAGACCAA...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTCTGCTTTGGCCGGTCTaGTGTTGGCCACAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPLLWPV*CWPQPG
Trigger: ACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAG...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTTGCTGCTTTGGCCGGTCTaGTGTTGGCCACAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: CKRLVLIRLSVHCLATSLLLWPV*CWPQPG
Trigger: ACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAG...CAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAATCCACCGCTGTGCTTaGTCAATCTTGCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRIHRCA*SILPSR
Trigger: CCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGAT...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CGATATCCTGAGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGAAATGTTTCCAACATTAGCCAGACGATaGCCTTCGGCCACAAGCCCC +
Preference number: 4 (lower is better)
Translates to: RYPESRKLFCSPGSEMFPTLARR*PSATSP
Trigger: GGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAATGT...TGGAAACATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp CTGCTGTCTCTCGTCAATCATCTTGGCCATCTTAGTCATTCCTGGCCCAAGATTCGCCGTGGCTGCCACTaGCAACAGCTTGATGGGAGT +
Preference number: 4 (lower is better)
Translates to: LLSLVNHLGHLSHSWPKIRRGCH*QQLDGS
Trigger: ACTCCCATCAAGCTGTTGGCAGTGGCAGCCACGGCG...AATCTTGGGCCAGGAATGACTAAGATGGCCAAGATGATTGACGAGAGACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTACGTTTATCTGTGCACTaGTTGGCAACCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLRLSVH*LATSLA
Trigger: GGCCAAGGAGGTTGCCAAGCAGTGCACAGATAAACG...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGATGCATTATCACCAGGTaGGAGATCTGCTGTGCCACC +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRCIITR*EICCAT
Trigger: GGTGGCACAGCAGATCTCCCACCTGGTGATAATGCA...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CACGGTCATCCACTGTGGGATTATCAATCCACCGCTGTGCTTGCTCAATCTTGCCTTCAGTGTCCTTGCTaGCCCAGGCATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: HGHPLWDYQSTAVLAQSCLQCPC*PRHLHP
Trigger: GGGATGAAGATGCCTGGGCCAGCAAGGACACTGAAG...GCAAGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATGACCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATCAGTTTGGAGTCTATaGAGGCCAATGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSSVWSL*RPMLSS
Trigger: TGAAGAGAGCATTGGCCTCCATAGACTCCAAACTGA...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGAGCCAACCTTTGGCCTaGTTCAGTTTGGAGTCTATG +
Preference number: 4 (lower is better)
Translates to: SLTELGILGILHLPLSHQSQPLA*FSLESM
Trigger: CATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCT...CTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp CACGGTCATCCACTGTGGGATTATCAATCCACCGCTGTGCTTGCTCAATCTTGCAGGATCCTTGTCCTCTaGCACGGAGGTCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: HGHPLWDYQSTAVLAQSCRILVL*HGGQPL
Trigger: AAGTGGCTGACCTCCGTGCCAGAGGACAAGGATCCT...GCAAGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATGACCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCGCTGAGCTTTCTGCATaGCCACCGGTGAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLAELSA*PPVRIL
Trigger: AAGGATCCTCACCGGTGGCCATGCAGAAAGCTCAGC...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTTGGGTTCTGCAGGGCCGTaGCCACCTGTTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: CKRLVLIRLSVHCLATSLGSAGP*PPVWPR
Trigger: CCTTGGCCAAACAGGTGGCCACGGCCCTGCAGAACC...CAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGCCACAAGCCCCCGGATaGCAGCCTGACCGACTCCAC +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWPQAPG*QPDRLH
Trigger: GTGGAGTCGGTCAGGCTGCCATCCGGGGGCTTGTGG...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CGATATCCTGAGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGAAATGTTTCCAAGCTGGGCTGTCAGCTaGTCCACTCGGTCACACTTG +
Preference number: 4 (lower is better)
Translates to: RYPESRKLFCSPGSEMFPSWAVS*STRSHL
Trigger: CAAGTGTGACCGAGTGGACCAGCTGACAGCCCAGCT...TGGAAACATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATGCCAGGTCAGCCAGCTaGGCTGTCAGCTGGTCCACT +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDARSAS*AVSWST
Trigger: AGTGGACCAGCTGACAGCCCAGCTGGCTGACCTGGC...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGCCAGCAGGATCCGGTTaGCCCGACGAGCAATACTGG +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRPAGSG*PDEQYW
Trigger: CCAGTATTGCTCGTCGGGCCAACCGGATCCTGCTGG...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGGAGTTGTTCAAGGTCTaGTGGAGGCGGCGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRELFKV*WRRREV
Trigger: GACTTCCCGCCGCCTCCACCAGACCTTGAACAACTC...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGATTCATCCTTTTCCTCTaGTGGTGGAGGCCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRFILFL*WWRPRW
Trigger: CCACCTAGGCCTCCACCACCAGAGGAAAAGGATGAA...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGTCCGGCCCAGCATGGTaGCCTTCACTGTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRSGPAW*PSLWTG
Trigger: TCCTGTCCACAGTGAAGGCCACCATGCTGGGCCGGA...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAGAACCAGCATCTCTGTaGCCTGCTCAGACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLEPASL*PAQTPH
Trigger: ATGAGGAGTCTGAGCAGGCCACAGAGATGCTGGTTC...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGCTGGGCCCTGGGTCTTaGGATTCTGGAAGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVLGPGS*DSGRVN
Trigger: ATTCACTCTTCCAGAATCCCAAGACCCAGGGCCCAG...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACCAGGCCCCCATATGCTaGGGCTCCACAGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHQAPIC*GSTEAT
Trigger: GGTGGCCTCTGTGGAGCCCCAGCATATGGGGGCCTG...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCATGGGATGGCTACCTTaGCGGGCTGAGGCAGGATAT +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLMGWLP*RAEAGY
Trigger: ATATCCTGCCTCAGCCCGCCAAGGTAGCCATCCCAT...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTATGGAGTGCCGGGAGTaGCCCTGCTGGGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPMECRE*PCWEDG
Trigger: GCCATCTTCCCAGCAGGGCCACTCCCGGCACTCCAT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CAA 72 bp AATTCATCAGAGGCAGCTTTCACAGCCTCACGGAACTaGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: NSSEAAFTASRN*GSSEFSTSLLA
Trigger: GGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCTGATGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGATTTCCACTTTTGCTGTaGGCACATCCAGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRFPLLL*AHPDPE
Trigger: CTCAGGGTCTGGATGTGCTCACAGCAAAAGTGGAAA...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TGTTTGGCCAAGGCTCGAGCCTCTGGAGAATCTCCTTTCCCCTGTCTTCGTAGATGCAATGCTCTGCTTTaGGTTGGTCATGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: CLAKARASGESPFPCLRRCNALL*VGHGFQ
Trigger: CTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCA...TCTACGAAGACAGGGGAAAGGAGATTCTCCAGAGGCTCGAGCCTTGGCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp CAGGCAGAGGTGGTTTGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAAACATCTGACACTTCCTaGGTCATGGCCTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: QAEVVWEEQAHLLVGVVQTSDTS*VMASCI
Trigger: GATGCAGGAGGCCATGACTCAGGAAGTGTCAGATGT...TTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp TTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCCCACTGCCAACAGCTTaGTGGGAGTTGTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: LRASSWSCLAAIIIGWLIPLPTA*WELWYR
Trigger: GCGATACCACAACTCCCATCAAGCTGTTGGCAGTGG...GATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp TCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTTGGTCATGGCTTAGACCACCTGGGGTGTaGGTTCTCGGGCCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SEQHRSSLQCSALSWSWLRPPGV*VLGPSS
Trigger: TGAAGACGGCCCGAGAACTCACACCCCAGGTGGTCT...AAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGCCGAGTCACCTCATCTaGGGCCTTGGCGATGTCCTT +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRPSHLI*GLGDVL
Trigger: AAGGACATCGCCAAGGCCTCAGATGAGGTGACTCGG...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCTGTTCACTTGGATTCTaGGCTTATGTGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFCSLGF*AYVKSM
Trigger: CATGGACTTCACATAAGCTCAGAATCCAAGTGAACA...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGGCTACCTTGGCGGGCTaGGGCAGGATATGGGACGGG +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKATLAG*GRIWDG
Trigger: CCCGTCCCATATCCTGCCTCAGCCCGCCAAGGTAGC...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTAGTCTCCACCACCTCTaGCACTGTAAGATATTCCAA +
Preference number: 4 (lower is better)
Translates to: KVYSCFGRSAVGHSPVGFSLHHL*HCKIFQ
Trigger: TTGGAATATCTTACAGTGGCAGAGGTGGTGGAGACT...AAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTATCCACCATTTGGATCTaGAAGCCAGTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLSTIWI*KPVLSS
Trigger: GCTGCTCAGAACTGGCTTGCAGATCCAAATGGTGGA...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CGATATCCTGAGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGAAATGTTTCCAGAGCTGAGATGCAAGTaGTCGTGCCTGAGGACTCTC +
Preference number: 4 (lower is better)
Translates to: RYPESRKLFCSPGSEMFPELRCK*SCLRTL
Trigger: GAGAGTCCTCAGGCACGAGCACTTGCATCTCAGCTC...TGGAAACATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGGTCTTGGAGCTGAGATaGAAGTGCTCGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRVLELR*KCSCLR
Trigger: CCTCAGGCACGAGCACTTGCATCTCAGCTCCAAGAC...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAGCTTGCTGGACCATTTaGGAGCTTCATCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRACWTI*ELHHGA
Trigger: AGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGC...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR GCA 90 bp TTCATAGCTGAAATGAGAACTGGCAGCAACTCTTTCACGGTGTTCATCGAGTTCCCCGCTTGGTACCACTaGCCCCTCTTACCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: FIAEMRTGSNSFTVFIEFPAWYH*PLLPAE
Trigger: CTCGGCTGGTAAGAGGGGGCAGTGGTACCAAGCGGG...GAACTCGATGAACACCGTGAAAGAGTTGCTGCCAGTTCTCATTTCAGCTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTTCAGTTTGGAGTCTATaGAGGCCAATGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KVYSCFGRSAVGHSPVGFSVWSL*RPMLSS
Trigger: TGAAGAGAGCATTGGCCTCCATAGACTCCAAACTGA...AAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACAGCTGAGCTTTCTGCATaGCCACCGGTGAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTAELSA*PPVRIL
Trigger: AAGGATCCTCACCGGTGGCCATGCAGAAAGCTCAGC...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTATGCTCTGCTTTGAGTTaGTCATGGCTTCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLCSALS*SWLPAC
Trigger: GCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCA...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGCAAGGCTCGAGCCTCTaGAGAATCTCCTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRQGSSL*RISFPL
Trigger: CAGGGGAAAGGAGATTCTCCAGAGGCTCGAGCCTTG...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTGGTGTACAGCTGCTTTaGCCGGTCTGCTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVGVQLL*PVCCWP
Trigger: TGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACC...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGACACGGTCATCCACTGTaGGATTATCAATCCACCGCT +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRHGHPL*DYQSTA
Trigger: AGCGGTGGATTGATAATCCCACAGTGGATGACCGTG...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGGCAGCCGAGACCACCTaGGGTGTGAGTTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKAAETT*GVSSRA
Trigger: GGCCCGAGAACTCACACCCCAGGTGGTCTCGGCTGC...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTCCACTGGTTCTTCATaGTCTCAAAATGTTCATAAG +
Preference number: 4 (lower is better)
Translates to: PQGVQLLWPVCCWPQPGWSTGSS*SQNVHK
Trigger: CTTATGAACATTTTGAGACCATGAAGAACCAGTGGA...CCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp CTCATCAAATACCTCTTCCCTGTTAGGCGCATCAGGAGGCGCCGTGGCTGCCACCATCCAACAGAGATTTaGTATCAATGGCTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LIKYLFPVRRIRRRRGCHHPTEI*YQWLRP
Trigger: TGGACGAAGCCATTGATACCAAATCTCTGTTGGATG...GTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGGGAAGAGGTATTTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGCCCGACGAGCAATACTaGTTGCCCCAGCAACCAGCA +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRPDEQY*LPQQPA
Trigger: TGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGG...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTTTGTTCAAGGTCTGGTaGAGGCGGCGGGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVLFKVW*RRREVR
Trigger: CCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAA...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCAGGCAGAGGTGGTTTaGGAGGAGCAAGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: MVAFTVDRILSWVLMVGIQAEVV*EEQAHL
Trigger: CAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp CTGCTGTCTCTCGTCAATCATCTTGGCCATCTTAGTCATTCCTGGCCCAAGATTCTTTTCCTCTGGTGGTaGAGGCCTAGGTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: LLSLVNHLGHLSHSWPKILFLWW*RPRWRD
Trigger: GTCCCTCCACCTAGGCCTCCACCACCAGAGGAAAAG...AATCTTGGGCCAGGAATGACTAAGATGGCCAAGATGATTGACGAGAGACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGATCCTTTTCCTCTGGTaGTGGAGGCCTAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRILFLW*WRPRWR
Trigger: CCTCCACCTAGGCCTCCACCACCAGAGGAAAAGGAT...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TTCTCGGCCGTAGCACCAAGCTTTCCTGAATGGTTTTCAAAGTTAGCTGCCCTCGGATGCCCGGCTTGCTaGACCATTTGCGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: FSAVAPSFPEWFSKLAALGCPAC*TICELH
Trigger: ATGAAGCTCGCAAATGGTCCAGCAAGCCGGGCATCC...GAGGGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCTACGGCCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATTGGTCCGGCCCAGCATaGTGGCCTTCACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDWSGPA*WPSLWT
Trigger: TGTCCACAGTGAAGGCCACCATGCTGGGCCGGACCA...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAACTCTGGGCAGCTCCTaGGACTCAGATCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLTLGSS*DSDHFP
Trigger: AGGAAAATGATCTGAGTCCCAGGAGCTGCCCAGAGT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGATGGGATGGCTACCTTaGCGGGCTGAGGCAGGATAT +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRMGWLP*RAEAGY
Trigger: ATATCCTGCCTCAGCCCGCCAAGGTAGCCATCCCAT...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTTGCGGAGGTCAGCCACTTaGTCAGTCATCTGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: CKRLVLIRLSVHCLATSLRRSAT*SVICPS
Trigger: GCTAGGGCAGATGACTGATCAAGTGGCTGACCTCCG...CAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AGAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCGAGTTGTGGTATCGCTaGAAACATCTGACACTTCCT +
Preference number: 4 (lower is better)
Translates to: RGSFHSLTELGILGILHLELWYR*KHLTLP
Trigger: AGGAAGTGTCAGATGTTTTCAGCGATACCACAACTC...GAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTAGCACCAAGCTTTCCTaGATGGTTTTCAAAGTTAGC +
Preference number: 4 (lower is better)
Translates to: KVYSCFGRSAVGHSPVGFSTKLS*MVFKVS
Trigger: GCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCT...AAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGTCGGGCCGTCTTCACTaGGGCCTGAATGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWSGRLH*GLNAFH
Trigger: GTGGAAGGCATTCAGGCCTCAGTGAAGACGGCCCGA...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGAGACCACCTGGGGTGTaGGTTCTCGGGCCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVRPPGV*VLGPSS
Trigger: TGAAGACGGCCCGAGAACTCACACCCCAGGTGGTCT...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR TCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTCAGACTCCTCATCACTaGTGTTGGTCCGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPQTPHH*CWSGPA
Trigger: TGCTGGGCCGGACCAACATCAGTGATGAGGAGTCTG...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTTGGTCATGGCTTCAGACTCCTCATCACTaGTGTTGGTCCGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SEQHRSSLQCSALSWSWLQTPHH*CWSGPA
Trigger: TGCTGGGCCGGACCAACATCAGTGATGAGGAGTCTG...AAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCGGGATTCTGGAAGAGTaGATGGGAGCCAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLGILEE*MGAKER
Trigger: TCTTTCCTTGGCTCCCATTCACTCTTCCAGAATCCC...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTGGATGCTCTCGATCGTaGGCGTATGAAACACTGGCA +
Preference number: 4 (lower is better)
Translates to: MVAFTVDRILSWVLMVGIGCSRS*AYETLA
Trigger: TGCCAGTGTTTCATACGCGCACGATCGAGAGCATCC...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGCCACCGGCTCCAGGATaGTCTCGATCGTGCGCGTAT +
Preference number: 4 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVPPAPG*SRSCAY
Trigger: ATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGG...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTACCTCGCCCTCCTCGTaGATTATCACCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPTSPSS*IITRWE
Trigger: CTCCCACCTGGTGATAATGCACGAGGAGGGCGAGGT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGGGTCAGGAATGGCTTTaGCGTCCACCTCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVGQEWL*RPPRPP
Trigger: AGGAGGGCGAGGTGGACGGCAAAGCCATTCCTGACC...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAGTCTATGGAGGCCAATaGTCTCTTCATGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLVYGGQ*SLHGFS
Trigger: ACTGAAGCCATGAAGAGAGCATTGGCCTCCATAGAC...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGTCTGCCCTAGCATTTTaGAAGTTCCCAGAATCTCCC +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVSALAF*KFPESP
Trigger: GGGAGATTCTGGGAACTTGCAAAATGCTAGGGCAGA...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGTCATGGCTTCCAGCTTaGGAGCTGCATTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVSWLPA*ELHFPL
Trigger: AAGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGA...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGATCATGGCTTCCAGCTTaGGAGCTGCATTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRSWLPA*ELHFPL
Trigger: AAGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGA...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGCTGCTTTGGCCGGTCTaGTGTTGGCCACAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKLLWPV*CWPQPG
Trigger: ACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAG...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCGTGCTTGCTCAATCTTaGCCTCAAGGTGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLVLAQS*PQGVQL
Trigger: CAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCAC...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGATCCACCGCTGTGCTTaGTCAATCTTGCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRIHRCA*SILPSR
Trigger: CCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGAT...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TTCTCGGCCGTAGCACCAAGCTTTCCTGAATGGTTTTCAAAGTTAGCTGCCCTCATCCACCGCTGTGCTTaGTCAATCTTGCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: FSAVAPSFPEWFSKLAALIHRCA*SILPSR
Trigger: CCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGAT...GAGGGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCTACGGCCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGCGCCGTGGCTGCCACTaGCAACAGCTTGATGGGAGT +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWRRGCH*QQLDGS
Trigger: ACTCCCATCAAGCTGTTGGCAGTGGCAGCCACGGCG...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGCCCGCTTGGTACCACTaGCCCCTCTTACCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKPAWYH*PLLPAE
Trigger: CTCGGCTGGTAAGAGGGGGCAGTGGTACCAAGCGGG...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGAGCATCTCTGTGGCCTaGTCAGACTCCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRSISVA*SDSSSL
Trigger: CAGTGATGAGGAGTCTGAGCAGGCCACAGAGATGCT...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGCCAGGCTCAGCCAGGTaGCTACTGGTACCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWPGSAR*LLVPGS
Trigger: ACTCCCTGGTACCAGTAGGCACCTGGCTGAGCCTGG...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTACACCCTGGCTACTCTaGCCTTCCAGTGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPTPWLL*PSSGRE
Trigger: CTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGTGT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCCATCTTAGTCATTCCTaGCCCAAGATTCTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFHLSHS*PKILCV
Trigger: TACACAAAGAATCTTGGGCCAGGAATGACTAAGATG...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TTAGTCGGAGTTGTTCAAGGTCTGGTGGAGGCGGCGGGAAGTCAGGCTCCTGAGCATCTTAGTCATTCCTaGCCCAAGATTCTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: LVGVVQGLVEAAGSQAPEHLSHS*PKILCV
Trigger: TACACAAAGAATCTTGGGCCAGGAATGACTAAGATG...CTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAACTCCGACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAAGCCAACCTTTGGCCTaGTTCAGTTTGGAGTCTATG +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLSQPLA*FSLESM
Trigger: CATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TCAGTGTCCTTGCTGGCCCAGGCATCTTCATCCCAAGAGGTGAGTTGTAACACATGCTCTGCTTTGAGTTaGTCATGGCTTCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SVSLLAQASSSQEVSCNTCSALS*SWLPAC
Trigger: GCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCA...TGTGTTACAACTCACCTCTTGGGATGAAGATGCCTGGGCCAGCAAGGACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGTGGCCGGTCTGCTGTTaGCCACAGCCCGGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWWPVCC*PQPGWF
Trigger: AAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCA...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp GAGTCATGGCCTCCTGCATCCGAGCTTTTAGATCCTTTAAGGAGTCTTGGAGCTACACTTCCTGAGTCATaGCCTCCTGCATCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: ESWPPASELLDPLRSLGATLPES*PPASEL
Trigger: AAGCTCGGATGCAGGAGGCCATGACTCAGGAAGTGT...AGCTCCAAGACTCCTTAAAGGATCTAAAAGCTCGGATGCAGGAGGCCATGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGCCAGCAGGATCCGGTTaGCCCGACGAGCAATACTGG +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWPAGSG*PDEQYW
Trigger: CCAGTATTGCTCGTCGGGCCAACCGGATCCTGCTGG...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCTCACCATCGGGGAGATaGTTTTGCTCAATTCATCAG +
Preference number: 4 (lower is better)
Translates to: RGSFHSLTELGILGILHLSPSGR*FCSIHQ
Trigger: CTGATGAATTGAGCAAAACCATCTCCCCGATGGTGA...GAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATGAGTTGTTCAAGGTCTaGTGGAGGCGGCGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDELFKV*WRRREV
Trigger: GACTTCCCGCCGCCTCCACCAGACCTTGAACAACTC...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TCAATCCACCGCTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGCATCATGGAGCTGTCTaGCAGCCATCATCATTGGCT +
Preference number: 4 (lower is better)
Translates to: SIHRCACSILPSRCTAALHHGAV*QPSSLA
Trigger: AGCCAATGATGATGGCTGCCAGACAGCTCCATGATG...CAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACATTGCGAGCTTCATCATaGAGCTGTCTGGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTLRASS*SCLAAI
Trigger: GATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp GAGTCATGGCCTCCTGCATCCGAGCTTTTAGATCCTTTAAGGAGTCTTGGAGCTGAACCAGCATCTCTGTaGCCTGCTCAGACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ESWPPASELLDPLRSLGAEPASL*PAQTPH
Trigger: ATGAGGAGTCTGAGCAGGCCACAGAGATGCTGGTTC...AGCTCCAAGACTCCTTAAAGGATCTAAAAGCTCGGATGCAGGAGGCCATGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGCAGGGAAGGAAGGTATaGTTGGCAGCAACATGGAAA +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVQGRKV*LAATWK
Trigger: TTTCCATGTTGCTGCCAACCATACCTTCCTTCCCTG...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTAGTGTGTTCATGGGATaGCTACCTTGGCGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVSVFMG*LPWRAE
Trigger: CTCAGCCCGCCAAGGTAGCCATCCCATGAACACACT...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTACTCTGCCCTTCCAGTaGCAGAGAGCACCAGGACAC +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPTLPFQ*QRAPGH
Trigger: GTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CGATATCCTGAGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGAAATGTTTCCACTGCCTGGACAAGCTTaGTGCAAGCATTCTCAACCC +
Preference number: 4 (lower is better)
Translates to: RYPESRKLFCSPGSEMFPLPGQA*CKHSQP
Trigger: GGGTTGAGAATGCTTGCACCAAGCTTGTCCAGGCAG...TGGAAACATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAAAAAATCTTCATAGCTaGAATGAGAACTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSKNLHS*NENWQQ
Trigger: TTGCTGCCAGTTCTCATTTCAGCTATGAAGATTTTT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACACATCTAAGATCTGTCTaGTGGCCTGCTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTHLRSV*WPAHQH
Trigger: ATGCTGGTGAGCAGGCCATCAGACAGATCTTAGATG...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR TCA 90 bp CGATATCCTGAGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGAAATGTTTCCATTTCCACTTTTGCTGTaGGCACATCCAGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: RYPESRKLFCSPGSEMFPFPLLL*AHPDPE
Trigger: CTCAGGGTCTGGATGTGCTCACAGCAAAAGTGGAAA...TGGAAACATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATAAGGAGTCTTGGAGCTaGGATGCAAGTGCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDKESWS*DASARA
Trigger: GGCACGAGCACTTGCATCTCAGCTCCAAGACTCCTT...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAGAGTTGTGGTATCGCTaGAAACATCTGACACTTCCT +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRELWYR*KHLTLP
Trigger: AGGAAGTGTCAGATGTTTTCAGCGATACCACAACTC...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGGGGAAGTCAGGCTCCTaGGGTTGGAAGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWGKSGS*GWKASL
Trigger: CAGAGAAGCCTTCCAACCTCAGGAGCCTGACTTCCC...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGCCCCCATTCCTTTCTaGTGTGCCAGGCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTAPIPF*CARPGC
Trigger: ACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAGCTACCTTGGCGGGCTaGGGCAGGATATGGGACGGG +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKATLAG*GRIWDG
Trigger: CCCGTCCCATATCCTGCCTCAGCCCGCCAAGGTAGC...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCCTGGGCTTTGGAATATaGAAAATGGACCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLLGFGI*KMDLCG
Trigger: GCCACACAGGTCCATTTTTCATATTCCAAAGCCCAG...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACACCTCGCCCTCCTCGTaGATTATCACCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHTSPSS*IITRWE
Trigger: CTCCCACCTGGTGATAATGCACGAGGAGGGCGAGGT...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGATGTTCCAGAGAGGATaGCCCTTGACCCATCAATTA +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVMFQRG*PLTHQL
Trigger: TAATTGATGGGTCAAGGGGCATCCTCTCTGGAACAT...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCTTCCCAGAATCTCCCTaGGTTCTTTGCCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: LRASSWSCLAAIIIGWLIFPESP*VLCLHR
Trigger: TCTGTGCAGGCAAAGAACGCAGGGAGATTCTGGGAA...GATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGTTCCAGCTTGCGAGCTaGATTTTCCACTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVFQLAS*IFHFCC
Trigger: ACAGCAAAAGTGGAAAATGCAGCTCGCAAGCTGGAA...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CGGCTTGCTGGACCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATTTCTTTGCAATGCTCTaGTTTGAGTTGGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: RLAGPFASFIMELSGSHHFFAML*FELVMA
Trigger: AGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAA...ATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp GTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCGCTCACATACCTGTAAAGCACCTCGAATCTaGTCTTCTCCTTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: VDRILSWVLMVGIRSHTCKAPRI*SSPSGP
Trigger: TGGACCGGAAGGAGAAGAGCAGATTCGAGGTGCTTT...ACAGGTATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp CTGCTGTCTCTCGTCAATCATCTTGGCCATCTTAGTCATTCCTGGCCCAAGATTCTCAAGGTGTACAGCTaGTTTGGCCGGTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLSLVNHLGHLSHSWPKILKVYS*FGRSAV
Trigger: AACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAG...AATCTTGGGCCAGGAATGACTAAGATGGCCAAGATGATTGACGAGAGACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACAATCAATCCACCGCTGTaGTTGCTCAATCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTINPPL*LLNLAL
Trigger: GAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGAT...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAACATTAGCCAGACGATaGCCTTCGGCCACAAGCCCC +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTTLARR*PSATSP
Trigger: GGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAATGT...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTGTCTTGGAGCTGAGATaGAAGTGCTCGTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPVLELR*KCSCLR
Trigger: CCTCAGGCACGAGCACTTGCATCTCAGCTCCAAGAC...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTACGAGCAATACTGGTTaGCCCAGCAACCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVTSNTG*PSNQHL
Trigger: CAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGT...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGAGCATCTCTGTGGCCTaGTCAGACTCCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRSISVA*SDSSSL
Trigger: CAGTGATGAGGAGTCTGAGCAGGCCACAGAGATGCT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGGTCTCCTTCACAGACTaGATGAGGTTCTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRVSFTD*MRFWAL
Trigger: CAATGCCCAGAACCTCATGCAGTCTGTGAAGGAGAC...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGATCATTCCTTAAGTGGTaGTACAGAAGGACCCTAGGA +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRSFLKW*YRRTLG
Trigger: TCCTAGGGTCCTTCTGTAGCACCACTTAAGGAATGA...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACACCAATGCTCTCTTCATaGCTTCAGTGTCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTPMLSS*LQCPCW
Trigger: CCAGCAAGGACACTGAAGCCATGAAGAGAGCATTGG...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCAGCCAACCTTTGGCCTaGTTCAGTTTGGAGTCTATG +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLSQPLA*FSLESM
Trigger: CATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCT...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATAGGATCCTTGTCCTCTaGCACGGAGGTCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDRILVL*HGGQPL
Trigger: AAGTGGCTGACCTCCGTGCCAGAGGACAAGGATCCT...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACATTCCGGTCCACCATTTaGATCTGCAAGCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTFRSTI*ICKPVL
Trigger: CAGAACTGGCTTGCAGATCCAAATGGTGGACCGGAA...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp TTCATAGCTGAAATGAGAACTGGCAGCAACTCTTTCACGGTGTTCATCGAGTTCCAGCCCGGTTGGTTTTaGTCTGCAGGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FIAEMRTGSNSFTVFIEFQPGWF*SAGSAG
Trigger: CCCTGCAGAACCTGCAGACCAAAACCAACCGGGCTG...GAACTCGATGAACACCGTGAAAGAGTTGCTGCCAGTTCTCATTTCAGCTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTTGGCCACAGCCCGGTTaGTTTTGGTCTGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPWPQPG*FWSAGS
Trigger: AGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCA...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATCCACAAGCCCCCGGATaGCAGCCTGACCGACTCCAC +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDPQAPG*QPDRLH
Trigger: GTGGAGTCGGTCAGGCTGCCATCCGGGGGCTTGTGG...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAAGCTGGGCTGTCAGCTaGTCCACTCGGTCACACTTG +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTSWAVS*STRSHL
Trigger: CAAGTGTGACCGAGTGGACCAGCTGACAGCCCAGCT...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CGGCTTGCTGGACCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCCAAGCTTTCCTGAATaGTTTTCAAAGTTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RLAGPFASFIMELSGSHHPSFPE*FSKLAA
Trigger: GGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGG...ATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATGCAGCCGAGACCACCTaGGGTGTGAGTTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDAAETT*GVSSRA
Trigger: GGCCCGAGAACTCACACCCCAGGTGGTCTCGGCTGC...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TTCTCGGCCGTAGCACCAAGCTTTCCTGAATGGTTTTCAAAGTTAGCTGCCCTCGAGATTTGGTATCAATaGCTTCGTCCACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: FSAVAPSFPEWFSKLAALEIWYQ*LRPPAL
Trigger: CAGGGCTGGTGGACGAAGCCATTGATACCAAATCTC...GAGGGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCTACGGCCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGTTGTTCAAGGTCTGGTaGAGGCGGCGGGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVLFKVW*RRREVR
Trigger: CCTGACTTCCCGCCGCCTCCACCAGACCTTGAACAA...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATACCCACCTCAGCGGCTaGGATGCCCGGCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDTHLSG*DARLAG
Trigger: TCCAGCAAGCCGGGCATCCCAGCCGCTGAGGTGGGT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR CCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAGACAGGATTTTGAGCTaGGTGCTTATGGTTGGGATT +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRDRILS*VLMVGI
Trigger: AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTC...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGCCAGGTGCCTACTaGTACCAGGGAGTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVQPGAY*YQGVFL
Trigger: TAGAAAGACTCCCTGGTACCAGTAGGCACCTGGCTG...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAACGGGAGTGGCCCTGCTaGGAAGATGGCAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKREWPC*EDGRAT
Trigger: TGTGGCCCTGCCATCTTCCCAGCAGGGCCACTCCCG...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CAA 72 bp GCAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTaGGTCATGGCTTCCAGCTTGCGAGCTGCATTTTCC +
Preference number: 4 (lower is better)
Translates to: AASIFFAMLCFE*VMASSLRAAFS
Trigger: GGAAAATGCAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 72 bp TCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTaGAGTTGGTCATGGCTTCCAGCTTGCGAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SEQHRSSLQCSA*SWSWLPACELH
Trigger: ATGCAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 72 bp GTCATCCACTGTGGGATTATCAATCCACCGCTGTGCTaGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VIHCGIINPPLC*LNLALKVYSCF
Trigger: AAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
3UTR CAA 72 bp AAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTaGGCAACCTCCTTGGCCAACCGAGTCACCTCATCT +
Preference number: 4 (lower is better)
Translates to: KRLVLIRLSVHC*ATSLANRVTSS
Trigger: AGATGAGGTGACTCGGTTGGCCAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGCGGAGGTCAGCCACTTaGTCAGTCATCTGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKRRSAT*SVICPS
Trigger: GCTAGGGCAGATGACTGATCAAGTGGCTGACCTCCG...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTTGCAATGCTCTGCTTTaGGTTGGTCATGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVCNALL*VGHGFQ
Trigger: CTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCA...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGATCCGATATCCTaGGTCCAGGAAGCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVQDPIS*VQEALL
Trigger: CAAAAGAGCTTCCTGGACTCAGGATATCGGATCCTG...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGGCTGGTTGACCGGCTaGTTGGATGGCATTAACAGC +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTGWLTG*LDGINS
Trigger: GCTGTTAATGCCATCCAATCAGCCGGTCAACCAGCC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR TCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGTTTCTTCTTAGTAACTaGTTTGCCTGGGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRFLLSN*FAWALG
Trigger: ACCCAGGGCCCAGGCAAATCAGTTACTAAGAAGAAA...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TTCATCAGAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCATGTTCCAGAGAGGATaGCCCTTGACCCATCAATTA +
Preference number: 4 (lower is better)
Translates to: FIRGSFHSLTELGILGILMFQRG*PLTHQL
Trigger: TAATTGATGGGTCAAGGGGCATCCTCTCTGGAACAT...GAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCTGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCAGTCTCCACCACCTCTaGCACTGTAAGATATTCCAA +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLSLHHL*HCKIFQ
Trigger: TTGGAATATCTTACAGTGGCAGAGGTGGTGGAGACT...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CGATATCCTGAGTCCAGGAAGCTCTTTTGCAGTCCAGGGTCGGAAATGTTTCCAGTCTATGGAGGCCAATaGTCTCTTCATGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RYPESRKLFCSPGSEMFPVYGGQ*SLHGFS
Trigger: ACTGAAGCCATGAAGAGAGCATTGGCCTCCATAGAC...TGGAAACATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGACTCAGGATATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp GTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCGCTCACATACCTGTCCTGCGTTCTTTGCCTaGACAGAGTTCACCAACTTT +
Preference number: 4 (lower is better)
Translates to: VDRILSWVLMVGIRSHTCPAFFA*TEFTNF
Trigger: AAAGTTGGTGAACTCTGTGCAGGCAAAGAACGCAGG...ACAGGTATGTGAGCGAATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp TCAGTGTCCTTGCTGGCCCAGGCATCTTCATCCCAAGAGGTGAGTTGTAACACATTCCAGCTTGCGAGCTaGATTTTCCACTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SVSLLAQASSSQEVSCNTFQLAS*IFHFCC
Trigger: ACAGCAAAAGTGGAAAATGCAGCTCGCAAGCTGGAA...TGTGTTACAACTCACCTCTTGGGATGAAGATGCCTGGGCCAGCAAGGACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGAAAGCACCTCGAATCTaGTCTTCTCCTTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRKAPRI*SSPSGP
Trigger: TGGACCGGAAGGAGAAGAGCAGATTCGAGGTGCTTT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAAGATGCAAGTGCTCGTaGCTGAGGACTCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTRCKCS*LRTLPF
Trigger: GAAGGGGAGAGTCCTCAGGCACGAGCACTTGCATCT...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTATCACTGAGGCCTGAATaGCTTCCACTGTTGATTTAT +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLSLRPE*LPLLIY
Trigger: ATAAATCAACAGTGGAAGGCATTCAGGCCTCAGTGA...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TTCTCGGCCGTAGCACCAAGCTTTCCTGAATGGTTTTCAAAGTTAGCTGCCCTCTCGGGGAGATGGTTTTaGTCAATTCATCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FSAVAPSFPEWFSKLAALSGRWF*SIHQRQ
Trigger: CTGCCTCTGATGAATTGAGCAAAACCATCTCCCCGA...GAGGGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCTACGGCCGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTAGCATCGGCCGCATCTaGCTCAGCTACAACACCTAT +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPSIGRI*LSYNTY
Trigger: ATAGGTGTTGTAGCTGAGGCAGATGCGGCCGATGCT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR GCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCATGCGCTTGGCTGCTaGAATGATGTCATTGCCCTT +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVHALGC*NDVIAL
Trigger: AAGGGCAATGACATCATTGCAGCAGCCAAGCGCATG...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAACCCGCTTGGTACCACTaGCCCCTCTTACCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKPAWYH*PLLPAE
Trigger: CTCGGCTGGTAAGAGGGGGCAGTGGTACCAAGCGGG...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGTCCTTCAGACAGGGCTaGCTTGCCATTAAACACTCT +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRSFRQG*LAIKHS
Trigger: AGAGTGTTTAATGGCAAGGCAGCCCTGTCTGAAGGA...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGATACTTGGGAGTAGATaGAGAGAGCTTGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: RKEKQREVSPREQGQSRVILGSR*RELGCS
Trigger: ACTACAACCAAGCTCTCTGCATCTACTCCCAAGTAT...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAACTGTTTCATCCAGCTaGTTTCTGCCTGTTAACCTT +
Preference number: 4 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRTVSSS*FLPVNL
Trigger: AAGGTTAACAGGCAGAAAGCAGCTGGATGAAACAGT...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGAGGATCCTTGTCCTCTaGCACGGAGGTCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWRILVL*HGGQPL
Trigger: AAGTGGCTGACCTCCGTGCCAGAGGACAAGGATCCT...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTCCACTCGGTCACACTTaGCGAGAAGATCTTGCCGAT +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPPLGHT*REDLAD
Trigger: ATCGGCAAGATCTTCTCGCCAAGTGTGACCGAGTGG...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGAGCTGGGCTGTCAGCTaGTCCACTCGGTCACACTTG +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKSWAVS*STRSHL
Trigger: CAAGTGTGACCGAGTGGACCAGCTGACAGCCCAGCT...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTGGCAGCCATCATCATTaGCTGGTTAATCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPGSHHH*LVNHLP
Trigger: GGGGAGGTGATTAACCAGCCAATGATGATGGCTGCC...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCATCATGGAGCTGTCTaGCAGCCATCATCATTGGCT +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVHHGAV*QPSSLA
Trigger: AGCCAATGATGATGGCTGCCAGACAGCTCCATGATG...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CAGGCAGAGGTGGTTTGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAAGACAGGATTTTGAGCTaGGTGCTTATGGTTGGGATT +
Preference number: 4 (lower is better)
Translates to: QAEVVWEEQAHLLVGVVQDRILS*VLMVGI
Trigger: AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTC...TTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGTGGGTCTTGGGATTCTaGAAGAGTGAATGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRWVLGF*KSEWEP
Trigger: TGGCTCCCATTCACTCTTCCAGAATCCCAAGACCCA...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGGATTTGCCTGGGCCCTaGGTCTTGGGATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWDLPGP*VLGFWK
Trigger: CTTCCAGAATCCCAAGACCCAGGGCCCAGGCAAATC...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGGATTTGCCTGGGCCCTaGGTCTTGGGATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVDLPGP*VLGFWK
Trigger: CTTCCAGAATCCCAAGACCCAGGGCCCAGGCAAATC...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGACACAGTGTGTTCATaGGATGGCTACCTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTDTVCS*DGYLGG
Trigger: CCCGCCAAGGTAGCCATCCCATGAACACACTGTGTC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGGACACAGTGTGTTCATaGGATGGCTACCTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWDTVCS*DGYLGG
Trigger: CCCGCCAAGGTAGCCATCCCATGAACACACTGTGTC...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATGGCAGGGCCACACCCTaGCTACTCTGCCCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDGRATP*LLCPSS
Trigger: ACTGGAAGGGCAGAGTAGCCAGGGTGTGGCCCTGCC...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CAA 72 bp ACAGCTTTTGCATCCATCACCATCGGGGAGATGGTTTaGCTCAATTCATCAGAGGCAGCTTTCACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TAFASITIGEMV*LNSSEAAFTAS
Trigger: TGAGGCTGTGAAAGCTGCCTCTGATGAATTGAGCAAAACCATCTCCCCGATGGTGATGGATGCAAAAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTCATCTAAGATCTGTCTaGTGGCCTGCTCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPHLRSV*WPAHQH
Trigger: ATGCTGGTGAGCAGGCCATCAGACAGATCTTAGATG...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGAAGGAGTCTTGGAGCTaGGATGCAAGTGCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKKESWS*DASARA
Trigger: GGCACGAGCACTTGCATCTCAGCTCCAAGACTCCTT...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAACATCTGACACTTCCTaGGTCATGGCCTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTTSDTS*VMASCI
Trigger: GATGCAGGAGGCCATGACTCAGGAAGTGTCAGATGT...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGATCGCTGAAAACATCTaGCACTTCCTGAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRIAENI*HFLSHG
Trigger: GCCATGACTCAGGAAGTGTCAGATGTTTTCAGCGAT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATGTCTTCACTGAGGCCTaGATGCCTTCCACTGTTGAT +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDVFTEA*MPSTVD
Trigger: ATCAACAGTGGAAGGCATTCAGGCCTCAGTGAAGAC...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACATGTCCTTGGCACACTaGATGAGTGCCCGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHMSLAH*MSARLV
Trigger: TACCAAGCGGGCACTCATTCAGTGTGCCAAGGACAT...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR TCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTCTGTGGACAGGATTTTaGGCTGGGTGCTTATGGTTG +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPLWTGF*AGCLWL
Trigger: CAACCATAAGCACCCAGCTCAAAATCCTGTCCACAG...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGAGGTTCTGGGCATTGTaGACCAGCATCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKRFWAL*TSISVA
Trigger: GGCCACAGAGATGCTGGTTCACAATGCCCAGAACCT...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATCCTTCACAGACTGCATaGGGTTCTGGGCATTGTGAA +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDPSQTA*GSGHCE
Trigger: TTCACAATGCCCAGAACCTCATGCAGTCTGTGAAGG...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTCCTTCACAGACTGCATaGGGTTCTGGGCATTGTGAA +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPPSQTA*GSGHCE
Trigger: TTCACAATGCCCAGAACCTCATGCAGTCTGTGAAGG...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGTGTTCGAATTTTGATTaGAGCAGCTTCAGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRCSNFD*SSFSFP
Trigger: CGGGAAGCTGAAGCTGCTTCAATCAAAATTCGAACA...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAAAATGTCTTCTAATTTaGAGAGGCCCCCATTCCTTT +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLKCLLI*RGPHSF
Trigger: AAAGGAATGGGGGCCTCTTCAAATTAGAAGACATTT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAAAATCAGGGAAAAAGTaGTGTCCCAACTCTACTCTA +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLKSGKK*CPNSTL
Trigger: TAGAGTAGAGTTGGGACATCACTTTTTCCCTGATTT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATTCTCCCTGCGTTCTTTaGCTGCACAGAGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDSPCVL*LHRVHQ
Trigger: TTGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGA...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTTGTCTCCCTGCGTTCTTTaGCTGCACAGAGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: CKRLVLIRLSVHCLATSLSPCVL*LHRVHQ
Trigger: TTGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGA...CAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTTTCCCAGAATCTCCCTaGGTTCTTTGCCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPFPESP*VLCLHR
Trigger: TCTGTGCAGGCAAAGAACGCAGGGAGATTCTGGGAA...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGTCTGCCCTAGCATTTTaGAAGTTCCCAGAATCTCCC +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRSALAF*KFPESP
Trigger: GGGAGATTCTGGGAACTTGCAAAATGCTAGGGCAGA...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCTTCTTTGCAATGCTCTaGTTTGAGTTGGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLFFAML*FELVMA
Trigger: AGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAA...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CAGGCAGAGGTGGTTTGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAACGATCTTCTTTGCAATaGTCTGCTTTGAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: QAEVVWEEQAHLLVGVVQRSSLQ*SALSWS
Trigger: TGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCG...TTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGCTCAAGGTGTACAGCTaGTTTGGCCGGTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWLKVYS*FGRSAV
Trigger: AACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAG...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACCTCAAGGTGTACAGCTaGTTTGGCCGGTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHLKVYS*FGRSAV
Trigger: AACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAG...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATAGGAGGCGCCGTGGCTaGCACTGCCAACAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDRRRRG*HCQQLD
Trigger: ATCAAGCTGTTGGCAGTGGCAGCCACGGCGCCTCCT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAACGAGCAATACTGGTTaGCCCAGCAACCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTTSNTG*PSNQHL
Trigger: CAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGT...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATCTGCCTGGACAAGCTTaGTGCAAGCATTCTCAACCT +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDLPGQA*CKHSQP
Trigger: AGGTTGAGAATGCTTGCACCAAGCTTGTCCAGGCAG...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTCCAATGCTCTCTTCATaGCTTCAGTGTCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPPMLSS*LQCPCW
Trigger: CCAGCAAGGACACTGAAGCCATGAAGAGAGCATTGG...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TTCCAAAATTCCTTTGCAAACTCTAATAATTTTACGGACCTCAGCCTCATCGAACTCACCAGCATCCCCTaGGGAGGCACTAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: FQNSFANSNNFTDLSLIELTSIP*GGTRVT
Trigger: CGTGACCCTAGTGCCTCCCCAGGGGATGCTGGTGAG...TTCGATGAGGCTGAGGTCCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGCTTTGAGTTGGTCATaGCTTCCAGCTTGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTALSWS*LPACEL
Trigger: CAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGGCTTTGAGTTGGTCATaGCTTCCAGCTTGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVALSWS*LPACEL
Trigger: CAGCTCGCAAGCTGGAAGCCATGACCAACTCAAAGC...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGCAAGGCTCGAGCCTCTaGAGAATCTCCTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKQGSSL*RISFPL
Trigger: CAGGGGAAAGGAGATTCTCCAGAGGCTCGAGCCTTG...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAATGGTGGAGGCCTAGGTaGAGGGACCTCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKWWRPR*RDLTFR
Trigger: CCTGAAGGTGAGGTCCCTCCACCTAGGCCTCCACCA...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGTTCATCCTTTTCCTCTaGTGGTGGAGGCCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWFILFL*WWRPRW
Trigger: CCACCTAGGCCTCCACCACCAGAGGAAAAGGATGAA...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACGGCAGCCATCATCATTaGCTGGTTAATCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHGSHHH*LVNHLP
Trigger: GGGGAGGTGATTAACCAGCCAATGATGATGGCTGCC...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATCATCATGGAGCTGTCTaGCAGCCATCATCATTGGCT +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDHHGAV*QPSSLA
Trigger: AGCCAATGATGATGGCTGCCAGACAGCTCCATGATG...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGGCTTGGCAACCTCCTTaGCCAACCGAGTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKAWQPP*PTESPH
Trigger: ATGAGGTGACTCGGTTGGCCAAGGAGGTTGCCAAGC...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATCTGGGTGCTTATGGTTaGGATTCGCTCACATACCTG +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDLGAYG*DSLTYL
Trigger: CAGGTATGTGAGCGAATCCCAACCATAAGCACCCAG...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGGACAGGATTTTGAGCTaGGTGCTTATGGTTGGGATT +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRDRILS*VLMVGI
Trigger: AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTC...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATTGGTCCGGCCCAGCATaGTGGCCTTCACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDWSGPA*WPSLWT
Trigger: TGTCCACAGTGAAGGCCACCATGCTGGGCCGGACCA...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAGCTCCCAGCAACTCTaGGCAGCTCCTGGGACTCAG +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKSSQQL*AAPGTQ
Trigger: CTGAGTCCCAGGAGCTGCCCAGAGTTGCTGGGAGCT...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATACCCAGTCTGCCTATTaGGATAGAGGGTGCACAAGT +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDTQSAY*DRGCTS
Trigger: ACTTGTGCACCCTCTATCCCAATAGGCAGACTGGGT...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGGAGCTTGGTTGTAGTTaGTTGCAGGGAGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRELGCS*LQGGRN
Trigger: ATTCCTACCTCCCTGCAACCAACTACAACCAAGCTC...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGACACACAGCGATGGGTaGGAAGGAAGGATGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWTHSDG*EGRMFR
Trigger: CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGT...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTTGTCATTGCCCTTGCTaGACCATTTGCGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVCHCPC*TICELH
Trigger: ATGAAGCTCGCAAATGGTCCAGCAAGGGCAATGACA...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR TCA 90 bp TGTTTGGCCAAGGCTCGAGCCTCTGGAGAATCTCCTTTCCCCTGTCTTCGTAGAAAAAATCTTCATAGCTaGAATGAGAACTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: CLAKARASGESPFPCLRRKNLHS*NENWQQ
Trigger: TTGCTGCCAGTTCTCATTTCAGCTATGAAGATTTTT...TCTACGAAGACAGGGGAAAGGAGATTCTCCAGAGGCTCGAGCCTTGGCCAAACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCTTCATCCCAAGAGGTaGGTTGTAACACACGAATTA +
Preference number: 4 (lower is better)
Translates to: MVAFTVDRILSWVLMVGILHPKR*VVTHEL
Trigger: TAATTCGTGTGTTACAACTCACCTCTTGGGATGAAG...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACATGCAATGCTCTGCTTTaGGTTGGTCATGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTCNALL*VGHGFQ
Trigger: CTGGAAGCCATGACCAACTCAAAGCAGAGCATTGCA...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTTGGTCATGGCTTTCTGCAAGCCAGTTCTaGGCAGCATCGATCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SEQHRSSLQCSALSWSWLSASQF*AASIFF
Trigger: AAAGAAGATCGATGCTGCTCAGAACTGGCTTGCAGA...AAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp TCAATCCACCGCTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGAATGCCTTCCACTGTTaGTTTATTAGCAGTACCAAC +
Preference number: 4 (lower is better)
Translates to: SIHRCACSILPSRCTAALNAFHC*FISSTN
Trigger: GTTGGTACTGCTAATAAATCAACAGTGGAAGGCATT...CAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGTCTTCACTGAGGCCTaGATGCCTTCCACTGTTGAT +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTVFTEA*MPSTVD
Trigger: ATCAACAGTGGAAGGCATTCAGGCCTCAGTGAAGAC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACCAGGATCCGATATCCTaGGTCCAGGAAGCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHQDPIS*VQEALL
Trigger: CAAAAGAGCTTCCTGGACTCAGGATATCGGATCCTG...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR TCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATGGGAAGTCAGGCTCCTaGGGTTGGAAGGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDGKSGS*GWKASL
Trigger: CAGAGAAGCCTTCCAACCTCAGGAGCCTGACTTCCC...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGATGTCCTTGGCACACTaGATGAGTGCCCGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKMSLAH*MSARLV
Trigger: TACCAAGCGGGCACTCATTCAGTGTGCCAAGGACAT...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGAGTCTCCACCACCTCTaGCACTGTAAGATATTCCAA +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRSLHHL*HCKIFQ
Trigger: TTGGAATATCTTACAGTGGCAGAGGTGGTGGAGACT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGTGGCTTCAGTGTCCTTaGTGGCCCAGGCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKWLQCP*WPRHLH
Trigger: ATGAAGATGCCTGGGCCAGCAAGGACACTGAAGCCA...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGTCTCCCTGCGTTCTTTaGCTGCACAGAGTTCACCAA +
Preference number: 4 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVSPCVL*LHRVHQ
Trigger: TTGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGA...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTTGTCATGGCTTCCAGCTTaGGAGCTGCATTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: CKRLVLIRLSVHCLATSLSWLPA*ELHFPL
Trigger: AAGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGA...CAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGCGATCTTCTTTGCAATaGTCTGCTTTGAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRRSSLQ*SALSWS
Trigger: TGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCG...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TTCATAGCTGAAATGAGAACTGGCAGCAACTCTTTCACGGTGTTCATCGAGTTCATCAATCCACCGCTGTaGTTGCTCAATCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: FIAEMRTGSNSFTVFIEFINPPL*LLNLAL
Trigger: GAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGAT...GAACTCGATGAACACCGTGAAAGAGTTGCTGCCAGTTCTCATTTCAGCTATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp CACGGTCATCCACTGTGGGATTATCAATCCACCGCTGTGCTTGCTCAATCTTGCGTTTTCAAAGTTAGCTaGCCTCTCATCAAATACCTC +
Preference number: 4 (lower is better)
Translates to: HGHPLWDYQSTAVLAQSCVFKVS*PLIKYL
Trigger: GAGGTATTTGATGAGAGGGCAGCTAACTTTGAAAAC...GCAAGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATGACCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATTCGGGGAGATGGTTTTaGTCAATTCATCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDSGRWF*SIHQRQ
Trigger: CTGCCTCTGATGAATTGAGCAAAACCATCTCCCCGA...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAACCTCCCCGGCCTTCTaGTCAGGGAACTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKTSPAF*SGNSSS
Trigger: GGATGAAGAGTTCCCTGAGCAGAAGGCCGGGGAGGT...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATACCTCCCCGGCCTTCTaGTCAGGGAACTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDTSPAF*SGNSSS
Trigger: GGATGAAGAGTTCCCTGAGCAGAAGGCCGGGGAGGT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGTCTCCTTCACAGACTaGATGAGGTTCTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTVSFTD*MRFWAL
Trigger: CAATGCCCAGAACCTCATGCAGTCTGTGAAGGAGAC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGCCTTGCTGGACCATTTaGGAGCTTCATCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWPCWTI*ELHHGA
Trigger: AGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGG...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACACTGCCTGGACAAGCTTaGTGCAAGCATTCTCAACCT +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTLPGQA*CKHSQP
Trigger: AGGTTGAGAATGCTTGCACCAAGCTTGTCCAGGCAG...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTTCAGTTTGGAGTCTATaGAGGCCAATGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVSVWSL*RPMLSS
Trigger: TGAAGAGAGCATTGGCCTCCATAGACTCCAAACTGA...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TTCATAGCTGAAATGAGAACTGGCAGCAACTCTTTCACGGTGTTCATCGAGTTCTTCCGGTCCACCATTTaGATCTGCAAGCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: FIAEMRTGSNSFTVFIEFFRSTI*ICKPVL
Trigger: CAGAACTGGCTTGCAGATCCAAATGGTGGACCGGAA...GAACTCGATGAACACCGTGAAAGAGTTGCTGCCAGTTCTCATTTCAGCTATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGCCACTCGGTCACACTTaGCGAGAAGATCTTGCCGAT +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKPLGHT*REDLAD
Trigger: ATCGGCAAGATCTTCTCGCCAAGTGTGACCGAGTGG...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTATCCACTGGTTCTTCATaGTCTCAAAATGTTCATAAG +
Preference number: 4 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLSTGSS*SQNVHK
Trigger: CTTATGAACATTTTGAGACCATGAAGAACCAGTGGA...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGAGATTTGGTATCAATaGCTTCGTCCACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTEIWYQ*LRPPAL
Trigger: CAGGGCTGGTGGACGAAGCCATTGATACCAAATCTC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TTCCAAAATTCCTTTGCAAACTCTAATAATTTTACGGACCTCAGCCTCATCGAATGGTCCGGCCCAGCATaGTGGCCTTCACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: FQNSFANSNNFTDLSLIEWSGPA*WPSLWT
Trigger: TGTCCACAGTGAAGGCCACCATGCTGGGCCGGACCA...TTCGATGAGGCTGAGGTCCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCTGGCTAGTGTTCACTTaGATTCTGAGCTTATGTGAA +
Preference number: 4 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLWLVFT*ILSLCE
Trigger: TTCACATAAGCTCAGAATCCAAGTGAACACTAGCCA...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATGCAGAGCAGAGTGTCTaGCTAGTGTTCACTTGGATT +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDAEQSV*LVFTWI
Trigger: AATCCAAGTGAACACTAGCCAGACACTCTGCTCTGC...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATACTCTGCCCTTCCAGTaGCAGAGAGCACCAGGACAC +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDTLPFQ*QRAPGH
Trigger: GTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGGTACACATTCGATGTTaGGAACTAACACACAGCGAT +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRVHIRC*ELTHSD
Trigger: ATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTAC...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACTTCGGGGAACAGTGGTaGTCTCCACAGATAGCTAGA +
Preference number: 4 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHFGEQW*SPQIAR
Trigger: TCTAGCTATCTGTGGAGACCACCACTGTTCCCCGAA...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGCTTTTCGGGGAACAGTaGTGGTCTCCACAGATAGCT +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWLFGEQ*WSPQIA
Trigger: AGCTATCTGTGGAGACCACCACTGTTCCCCGAAAAG...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
3UTR CAA 72 bp CAGGATATGGGACGGGAAGTTTCCCTAGCACAGACATaGCTCAGGGGCATGGTAAAAGCAGAATCATATGAT +
Preference number: 4 (lower is better)
Translates to: QDMGREVSLAQT*LRGMVKAESYD
Trigger: ATCATATGATTCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCCATATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGCTTCATCCCAAGAGGTaGGTTGTAACACACGAATTA +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRLHPKR*VVTHEL
Trigger: TAATTCGTGTGTTACAACTCACCTCTTGGGATGAAG...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACATCTGCAAGCCAGTTCTaGGCAGCATCGATCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTSASQF*AASIFF
Trigger: AAAGAAGATCGATGCTGCTCAGAACTGGCTTGCAGA...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTGAGTTGTGGTATCGCTaGAAACATCTGACACTTCCT +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPELWYR*KHLTLP
Trigger: AGGAAGTGTCAGATGTTTTCAGCGATACCACAACTC...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGCTGTGGACAGGATTTTaGGCTGGGTGCTTATGGTTG +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKLWTGF*AGCLWL
Trigger: CAACCATAAGCACCCAGCTCAAAATCCTGTCCACAG...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAGGTTCTGGGCATTGTaGACCAGCATCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKRFWAL*TSISVA
Trigger: GGCCACAGAGATGCTGGTTCACAATGCCCAGAACCT...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACACATCTGTTCGAATTTTaGTTGAAGCAGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTHLFEF*LKQLQL
Trigger: AAGCTGAAGCTGCTTCAATCAAAATTCGAACAGATG...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR TCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATGCCCTGGTGGATCCCTaGAAACCCTATTTATTCTAT +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDALVDP*KPYLFY
Trigger: ATAGAATAAATAGGGTTTTCAGGGATCCACCAGGGC...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGCCTGCGTTCTTTGCCTaGACAGAGTTCACCAACTTT +
Preference number: 4 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVPAFFA*TEFTNF
Trigger: AAAGTTGGTGAACTCTGTGCAGGCAAAGAACGCAGG...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGTTCCCAGAATCTCCCTaGGTTCTTTGCCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKFPESP*VLCLHR
Trigger: TCTGTGCAGGCAAAGAACGCAGGGAGATTCTGGGAA...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TTCATAGCTGAAATGAGAACTGGCAGCAACTCTTTCACGGTGTTCATCGAGTTCTCTGCCCTAGCATTTTaGAAGTTCCCAGAATCTCCC +
Preference number: 4 (lower is better)
Translates to: FIAEMRTGSNSFTVFIEFSALAF*KFPESP
Trigger: GGGAGATTCTGGGAACTTGCAAAATGCTAGGGCAGA...GAACTCGATGAACACCGTGAAAGAGTTGCTGCCAGTTCTCATTTCAGCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTTTCTTTGCAATGCTCTaGTTTGAGTTGGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVFFAML*FELVMA
Trigger: AGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAA...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGTCCACCATTTGGATCTaGAAGCCAGTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKSTIWI*KPVLSS
Trigger: GCTGCTCAGAACTGGCTTGCAGATCCAAATGGTGGA...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGAAAGCACCTCGAATCTaGTCTTCTCCTTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKKAPRI*SSPSGP
Trigger: TGGACCGGAAGGAGAAGAGCAGATTCGAGGTGCTTT...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGGTGCTTGCTCAATCTTaGCCTCAAGGTGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKVLAQS*PQGVQL
Trigger: CAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCAC...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGATCAATCCACCGCTGTaGTTGCTCAATCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKINPPL*LLNLAL
Trigger: GAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGAT...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGACTGCCCTCTCATTTTaGCTAGTAGGAACTTACTGT +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRTALSF*LVGTYC
Trigger: ACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATTGGCCACAGCCCGGTTaGTTTTGGTCTGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDWPQPG*FWSAGS
Trigger: AGAACCTGCAGACCAAAACCAACCGGGCTGTGGCCA...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGCACGGTCATCCACTGTaGGATTATCAATCCACCGCT +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKHGHPL*DYQSTA
Trigger: AGCGGTGGATTGATAATCCCACAGTGGATGACCGTG...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGCCAAGCTTTCCTGAATaGTTTTCAAAGTTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRPSFPE*FSKLAA
Trigger: GGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGG...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGGAGATTTGGTATCAATaGCTTCGTCCACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKEIWYQ*LRPPAL
Trigger: CAGGGCTGGTGGACGAAGCCATTGATACCAAATCTC...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATCAGGCAGAGGTGGTTTaGGAGGAGCAAGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDQAEVV*EEQAHL
Trigger: CAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATATCCTTTTCCTCTGGTaGTGGAGGCCTAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDILFLW*WRPRWR
Trigger: CCTCCACCTAGGCCTCCACCACCAGAGGAAAAGGAT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAACCTCATCTGAGGCCTTaGCGATGTCCTTGGCACACT +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKPHLRP*RCPWHT
Trigger: AGTGTGCCAAGGACATCGCCAAGGCCTCAGATGAGG...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGTGGGTCTTGGGATTCTaGAAGAGTGAATGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKWVLGF*KSEWEP
Trigger: TGGCTCCCATTCACTCTTCCAGAATCCCAAGACCCA...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGGAAGGAAGGTATGGTTaGCAGCAACATGGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWEGRYG*QQHGKL
Trigger: GAGCTTTCCATGTTGCTGCCAACCATACCTTCCTTC...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATAGTGTGTTCATGGGATaGCTACCTTGGCGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDSVFMG*LPWRAE
Trigger: CTCAGCCCGCCAAGGTAGCCATCCCATGAACACACT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACGAGCTTGGTTGTAGTTaGTTGCAGGGAGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHELGCS*LQGGRN
Trigger: ATTCCTACCTCCCTGCAACCAACTACAACCAAGCTC...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGACTAACACACAGCGATaGGTGGGAAGGAAGGATGTT +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWTNTQR*VGRKDV
Trigger: AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGT...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGGTACACATTCGATGTTaGGAACTAACACACAGCGAT +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRVHIRC*ELTHSD
Trigger: ATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTAC...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGAGGGGGAAGGACCTGTaGTACTCCTACAAACTTAAC +
Preference number: 4 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVRGKDL*YSYKLN
Trigger: GTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCT...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR TCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGAAATGTCTTCTAATTTaGAGAGGCCCCCATTCCTTT +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRKCLLI*RGPHSF
Trigger: AAAGGAATGGGGGCCTCTTCAAATTAGAAGACATTT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGAGTAGTATTTCCCATTaGTTCATCTTCAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRSSISH*FIFSST
Trigger: AGTGCTGCTGAAGATGAATCAATGGGAAATACTACT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACATGCTGATCTTGTCCTaGGAGGCAACTGATTTGAGA +
Preference number: 4 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHMLILS*EATDLR
Trigger: TCTCAAATCAGTTGCCTCTCAGGACAAGATCAGCAT...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATGGATGCTCTCGATCGTaGGCGTATGAAACACTGGCA +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDGCSRS*AYETLA
Trigger: TGCCAGTGTTTCATACGCGCACGATCGAGAGCATCC...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAGGATGCTCTCGATCGTaGGCGTATGAAACACTGGCA +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKGCSRS*AYETLA
Trigger: TGCCAGTGTTTCATACGCGCACGATCGAGAGCATCC...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACACTCAACCTTAATAAATaGTGGTGGCATATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTLNLNK*WWHISL
Trigger: AAGAGAGATATGCCACCAGCATTTATTAAGGTTGAG...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATCTGAAGCATCTGAGCTaGCTGGACAAGCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDLKHLS*LDKLGA
Trigger: TGCACCAAGCTTGTCCAGGCAGCTCAGATGCTTCAG...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAACTGAAGCATCTGAGCTaGCTGGACAAGCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKLKHLS*LDKLGA
Trigger: TGCACCAAGCTTGTCCAGGCAGCTCAGATGCTTCAG...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAATGGCTTCAGTGTCCTTaGTGGCCCAGGCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKWLQCP*WPRHLH
Trigger: ATGAAGATGCCTGGGCCAGCAAGGACACTGAAGCCA...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATCGTTTATCTGTGCACTaGTTGGCAACCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDRLSVH*LATSLA
Trigger: GGCCAAGGAGGTTGCCAAGCAGTGCACAGATAAACG...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGACTAGAATTCTAGTCTaGAAATACCACTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRTRILV*KYHSPL
Trigger: TAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGT...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATTTGGTTGTAGTTGGTTaGAGGGAGGTAGGAATTACA +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDLVVVG*REVGIT
Trigger: TGTAATTCCTACCTCCCTGCAACCAACTACAACCAA...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATATACTTGGGAGTAGATaGAGAGAGCTTGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDILGSR*RELGCS
Trigger: ACTACAACCAAGCTCTCTGCATCTACTCCCAAGTAT...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATACTGCCCTCTCATTTTaGCTAGTAGGAACTTACTGT +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDTALSF*LVGTYC
Trigger: ACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGT...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACACTGCCTGTTAACCTTTaGCACTTCCATTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTLPVNL*HFHSFK
Trigger: CTTGAAGGAATGGAAGTGGCAAAGGTTAACAGGCAG...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAATGCATTATCACCAGGTaGGAGATCTGCTGTGCCACC +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKCIITR*EICCAT
Trigger: GGTGGCACAGCAGATCTCCCACCTGGTGATAATGCA...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAACACTTCCTGAGTCATaGCCTCCTGCATCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKTLPES*PPASEL
Trigger: AAGCTCGGATGCAGGAGGCCATGACTCAGGAAGTGT...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATCATCCAACAGAGATTTaGTATCAATGGCTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDHPTEI*YQWLRP
Trigger: TGGACGAAGCCATTGATACCAAATCTCTGTTGGATG...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGTCACCATCGGGGAGATaGTTTTGCTCAATTCATCAG +
Preference number: 4 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVSPSGR*FCSIHQ
Trigger: CTGATGAATTGAGCAAAACCATCTCCCCGATGGTGA...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAACAGCCAGGTGCCTACTaGTACCAGGGAGTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKQPGAY*YQGVFL
Trigger: TAGAAAGACTCCCTGGTACCAGTAGGCACCTGGCTG...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGAGCACCAAGCTTTCCTaGATGGTTTTCAAAGTTAGC +
Preference number: 4 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWSTKLS*MVFKVS
Trigger: GCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCT...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACAGCACCAAGCTTTCCTaGATGGTTTTCAAAGTTAGC +
Preference number: 4 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHSTKLS*MVFKVS
Trigger: GCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCT...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR TCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATAATGCCTTCCACTGTTaGTTTATTAGCAGTACCAAC +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDNAFHC*FISSTN
Trigger: GTTGGTACTGCTAATAAATCAACAGTGGAAGGCATT...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTAATGCCTTCCACTGTTaGTTTATTAGCAGTACCAAC +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPNAFHC*FISSTN
Trigger: GTTGGTACTGCTAATAAATCAACAGTGGAAGGCATT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTCATCTGTTCGAATTTTaGTTGAAGCAGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPHLFEF*LKQLQL
Trigger: AAGCTGAAGCTGCTTCAATCAAAATTCGAACAGATG...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTGTTTTCAAAGTTAGCTaGCCTCTCATCAAATACCTC +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPVFKVS*PLIKYL
Trigger: GAGGTATTTGATGAGAGGGCAGCTAACTTTGAAAAC...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TTCATAGCTGAAATGAGAACTGGCAGCAACTCTTTCACGGTGTTCATCGAGTTCTCACTGAGGCCTGAATaGCTTCCACTGTTGATTTAT +
Preference number: 4 (lower is better)
Translates to: FIAEMRTGSNSFTVFIEFSLRPE*LPLLIY
Trigger: ATAAATCAACAGTGGAAGGCATTCAGGCCTCAGTGA...GAACTCGATGAACACCGTGAAAGAGTTGCTGCCAGTTCTCATTTCAGCTATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGACTAGAATTCTAGTCTaGAAATACCACTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRTRILV*KYHSPL
Trigger: TAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATCATCTTAGTCATTCCTaGCCCAAGATTCTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDHLSHS*PKILCV
Trigger: TACACAAAGAATCTTGGGCCAGGAATGACTAAGATG...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAATGCTCTGCTTTGAGTTaGTCATGGCTTCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKCSALS*SWLPAC
Trigger: GCAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCA...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAATTCCGGTCCACCATTTaGATCTGCAAGCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKFRSTI*ICKPVL
Trigger: CAGAACTGGCTTGCAGATCCAAATGGTGGACCGGAA...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACACATCCAACAGAGATTTaGTATCAATGGCTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTHPTEI*YQWLRP
Trigger: TGGACGAAGCCATTGATACCAAATCTCTGTTGGATG...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATTGGCTAGTGTTCACTTaGATTCTGAGCTTATGTGAA +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDWLVFT*ILSLCE
Trigger: TTCACATAAGCTCAGAATCCAAGTGAACACTAGCCA...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATAAAAATCTTCATAGCTaGAATGAGAACTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDKNLHS*NENWQQ
Trigger: TTGCTGCCAGTTCTCATTTCAGCTATGAAGATTTTT...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATTCTGCAAGCCAGTTCTaGGCAGCATCGATCTTCTTT +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDSASQF*AASIFF
Trigger: AAAGAAGATCGATGCTGCTCAGAACTGGCTTGCAGA...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAATCGCTGAAAACATCTaGCACTTCCTGAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKIAENI*HFLSHG
Trigger: GCCATGACTCAGGAAGTGTCAGATGTTTTCAGCGAT...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGTGTTCACTTGGATTCTaGGCTTATGTGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKCSLGF*AYVKSM
Trigger: CATGGACTTCACATAAGCTCAGAATCCAAGTGAACA...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAACCCTAGGAAAATGCTaGTCTTGTCCTGAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKTLGKC*SCPERQ
Trigger: TTGCCTCTCAGGACAAGATCAGCATTTTCCTAGGGT...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAGTCTATGGAGGCCAATaGTCTCTTCATGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKVYGGQ*SLHGFS
Trigger: ACTGAAGCCATGAAGAGAGCATTGGCCTCCATAGAC...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAACCTGCGTTCTTTGCCTaGACAGAGTTCACCAACTTT +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKPAFFA*TEFTNF
Trigger: AAAGTTGGTGAACTCTGTGCAGGCAAAGAACGCAGG...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp TTCCAAAATTCCTTTGCAAACTCTAATAATTTTACGGACCTCAGCCTCATCGAAGCTTGCTGGACCATTTaGGAGCTTCATCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: FQNSFANSNNFTDLSLIEACWTI*ELHHGA
Trigger: AGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGC...TTCGATGAGGCTGAGGTCCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CCA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTAAATCTGATCCTCAGTaGTTTGAACAGTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: STRILVCKYHSPLGRKCPKSDPQ*FEQSLF
Trigger: GAAAAGAGACTGTTCAAACCACTGAGGATCAGATTT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGCCAAGCTTTCCTGAATaGTTTTCAAAGTTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKPSFPE*FSKLAA
Trigger: GGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGG...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CAA 72 bp ACTGTGGTGATAAGAAATATGAAACCCATTACTCTCTaGAACCCCATACTTGGGAGTAGATGCAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TVVIRNMKPITL*NPILGSRCREL
Trigger: AAGCTCTCTGCATCTACTCCCAAGTATGGGGTTCAAGAGAGTAATGGGTTTCATATTTCTTATCACCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR TCA 90 bp TTCCAAAATTCCTTTGCAAACTCTAATAATTTTACGGACCTCAGCCTCATCGAAATCGCTGAAAACATCTaGCACTTCCTGAGTCATGGC +
Preference number: 4 (lower is better)
Translates to: FQNSFANSNNFTDLSLIEIAENI*HFLSHG
Trigger: GCCATGACTCAGGAAGTGTCAGATGTTTTCAGCGAT...TTCGATGAGGCTGAGGTCCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGGTTTTCAAAGTTAGCTaGCCTCTCATCAAATACCTC +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKVFKVS*PLIKYL
Trigger: GAGGTATTTGATGAGAGGGCAGCTAACTTTGAAAAC...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATTCTACTCTAAAAACCTaGTCCTACTATTTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDSTLKT*SYYFSQ
Trigger: CTGACTAAAATAGTAGGAGCAGGTTTTTAGAGTAGA...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATTCACCATCGGGGAGATaGTTTTGCTCAATTCATCAG +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDSPSGR*FCSIHQ
Trigger: CTGATGAATTGAGCAAAACCATCTCCCCGATGGTGA...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAGGTTCATTCCTTAAGTaGTGCTACAGAAGGACCCTA +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKGSFLK*CYRRTL
Trigger: TAGGGTCCTTCTGTAGCACCACTTAAGGAATGAACC...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR GCA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGCTCAACCTTAATAAATaGTGGTGGCATATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKLNLNK*WWHISL
Trigger: AAGAGAGATATGCCACCAGCATTTATTAAGGTTGAG...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATCGATCTTCTTTGCAATaGTCTGCTTTGAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDRSSLQ*SALSWS
Trigger: TGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCG...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAATCACTGAGGCCTGAATaGCTTCCACTGTTGATTTAT +
Preference number: 4 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKSLRPE*LPLLIY
Trigger: ATAAATCAACAGTGGAAGGCATTCAGGCCTCAGTGA...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR GCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATTTGGTTGTAGTTGGTTaGAGGGAGGTAGGAATTACA +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDLVVVG*REVGIT
Trigger: TGTAATTCCTACCTCCCTGCAACCAACTACAACCAA...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
3UTR CAA 72 bp ACCACCTCTGCCACTGTAAGATATTCCAAAATTCCTTaGCAAACTCTAATAATTTTACGGACCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TTSATVRYSKIP*QTLIILRTSAS
Trigger: TGAGGCTGAGGTCCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAATATCTTACAGTGGCAGAGGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR TCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATAGTAGTATTTCCCATTaGTTCATCTTCAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDSSISH*FIFSST
Trigger: AGTGCTGCTGAAGATGAATCAATGGGAAATACTACT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CCA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATTCCACTGGTTCTTCATaGTCTCAAAATGTTCATAAG +
Preference number: 4 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDSTGSS*SQNVHK
Trigger: CTTATGAACATTTTGAGACCATGAAGAACCAGTGGA...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS CCA 90 bp TGCCACCGGCTCCAGGATGCTCTCGATCGTGCGCGTATGAAACACTaGCATCGCGGCGGCGAGCGGGGCGGCGAACCGCGGGCGACAGAG +
Preference number: 5 (lower is better)
Translates to: CHRLQDALDRARMKH*HRGGERGGEPRATE
Trigger: CTCTGTCGCCCGCGGTTCGCCGCCCCGCTCGCCGCCGCGATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS TCA 90 bp ATCTGCTGTGCCACCGGCTCCAGGATGCTCTCGATCGTGCGCGTATaGAACACTGGCATCGCGGCGGCGAGCGGGGCGGCGAACCGCGGG +
Preference number: 5 (lower is better)
Translates to: ICCATGSRMLSIVRV*NTGIAAASGAANRG
Trigger: CCCGCGGTTCGCCGCCCCGCTCGCCGCCGCGATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS GCA 90 bp GGTGGGAGATCTGCTGTGCCACCGGCTCCAGGATGCTCTCGATCGTaGGCGTATGAAACACTGGCATCGCGGCGGCGAGCGGGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: GGRSAVPPAPGCSRS*AYETLASRRRAGRR
Trigger: TCGCCGCCCCGCTCGCCGCCGCGATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS GCA 90 bp TGGTGCAAGCATTCTCAACCCCGGACGAGGTTGCTGACGGCCGCCTaGACGGCGGCCACGGGCGCGGTGAGGTCAGGAATGGCTTTGCCG +
Preference number: 5 (lower is better)
Translates to: WCKHSQPRTRLLTAA*TAATGAVRSGMALP
Trigger: CGGCAAAGCCATTCCTGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGGTTGAGAATGCTTGCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS GCA 90 bp GCGGTGAGGTCAGGAATGGCTTTGCCGTCCACCTCGCCCTCCTCGTaGATTATCACCAGGTGGGAGATCTGCTGTGCCACCGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AVRSGMALPSTSPSS*IITRWEICCATGSR
Trigger: CCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGTGATAATGCACGAGGAGGGCGAGGTGGACGGCAAAGCCATTCCTGACCTCACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS-3UTR CAA 90 bp ATTAGCCAGACGATGCCCTTCGGCCACAAGCCCCCGGATGGCAGCCTGACCGACACCAGCAGGATCCGGTaGGCCCGACGAGCAATACTG +
Preference number: 5 (lower is better)
Translates to: ISQTMPFGHKPPDGSLTDTSRIR*ARRAIL
Trigger: CAGTATTGCTCGTCGGGCCAACCGGATCCTGCTGGT...GTCGGTCAGGCTGCCATCCGGGGGCTTGTGGCCGAAGGGCATCGTCTGGCTAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS GCA 90 bp GCATTATCACCAGGTGGGAGATCTGCTGTGCCACCGGCTCCAGGATaGTCTCGATCGTGCGCGTATGAAACACTGGCATCGCGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: ALSPGGRSAVPPAPG*SRSCAYETLASRRR
Trigger: TCGCCGCCGCGATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGTGATAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS CCA 90 bp ATGGCTTTGCCGTCCACCTCGCCCTCCTCGTGCATTATCACCAGGTaGGAGATCTGCTGTGCCACCGGCTCCAGGATGCTCTCGATCGTG +
Preference number: 5 (lower is better)
Translates to: MALPSTSPSSCIITR*EICCATGSRMLSIV
Trigger: CACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGTGATAATGCACGAGGAGGGCGAGGTGGACGGCAAAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS-3UTR CAA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAGGTCAGGAATGGCTTaGCCGTCCACCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFRSGMA*PSTSPS
Trigger: GGAGGGCGAGGTGGACGGCAAAGCCATTCCTGACCT...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTGGCCACAGCCCGGTaGGTTTTGGTCTGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PQGVQLLWPVCCWPQPGWLATAR*VLVCRF
Trigger: GAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAA...CCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAAGGTGTACAGCTGCTTaGGCCGGTCTGCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSRCTAA*AGLLLA
Trigger: GGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGGCTGGGATGCCCGGCTaGCTGGACCATTTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: SLTELGILGILHLPLSHQAGMPG*LDHLRA
Trigger: AGCTCGCAAATGGTCCAGCAAGCCGGGCATCCCAGC...CTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS CCA 90 bp CTGAGTAAGGGTCTGACTGAAGCATCTGAGCTGCCTGGACAAGCTTaGTGCAAGCATTCTCAACCCCGGACGAGGTTGCTGACGGCCGCC +
Preference number: 5 (lower is better)
Translates to: LSKGLTEASELPGQA*CKHSQPRTRLLTAA
Trigger: GGCGGCCGTCAGCAACCTCGTCCGGGGTTGAGAATGCTTGCACCAAGCTTGTCCAGGCAGCTCAGATGCTTCAGTCAGACCCTTACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp ACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGCAGGATTTGGCCGGTCTGCTGTaGGCCACAGCCCGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: TELGILGILHLPLSHQQDLAGLL*ATARLV
Trigger: AACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAA...ATCCTGCTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AAGCCCCCGGATGGCAGCCTGACCGACTCCACGGTCATCCACTGTGGGATTATCGGCTTGCTGGACCATTaGCGAGCTTCATCATGGAGC +
Preference number: 5 (lower is better)
Translates to: KPPDGSLTDSTVIHCGIIGLLDH*RASSWS
Trigger: GCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCC...GATAATCCCACAGTGGATGACCGTGGAGTCGGTCAGGCTGCCATCCGGGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCACCTCATCTGAGGCCTaGGCGATGTCCTTGGCACAC +
Preference number: 5 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFTSSEA*AMSLAH
Trigger: GTGTGCCAAGGACATCGCCAAGGCCTCAGATGAGGT...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCGAGCAAGTCTCTGTCTaGCAGCAGGGGGAAGGACCT +
Preference number: 5 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFEQVSV*QQGEGP
Trigger: AGGTCCTTCCCCCTGCTGCAAGACAGAGACTTGCTC...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCGCTGCCTGGACAAGCTaGGTGCAAGCATTCTCAACC +
Preference number: 5 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFAAWTS*VQAFST
Trigger: GGTTGAGAATGCTTGCACCAAGCTTGTCCAGGCAGC...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAATGGCTTCAGTGTCCTaGCTGGCCCAGGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSMASVS*LAQASS
Trigger: TGAAGATGCCTGGGCCAGCAAGGACACTGAAGCCAT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCAGGTGTACAGCTGCTTaGGCCGGTCTGCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: RGSFHSLTELGILGILHLRCTAA*AGLLLA
Trigger: GGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCT...GAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTGTGCTTGCTCAATCTaGCCCTCAAGGTGTACAGCT +
Preference number: 5 (lower is better)
Translates to: PQGVQLLWPVCCWPQPGWCACSI*PSRCTA
Trigger: AGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACA...CCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CTCATCAAATACCTCTTCCCTGTTAGGCGCATCAGGAGGCGCCGTGGCTGCCACGACGAGCAATACTGGTaGCCCCAGCAACCAGCATCT +
Preference number: 5 (lower is better)
Translates to: LIKYLFPVRRIRRRRGCHDEQYW*PQQPAS
Trigger: AGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTC...GTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGGGAAGAGGTATTTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAGCTGGGATGCCCGGCTaGCTGGACCATTTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRAGMPG*LDHLRA
Trigger: AGCTCGCAAATGGTCCAGCAAGCCGGGCATCCCAGC...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR CAA 90 bp GGCCCGACGAGCAATACTGGTTGCCCCAGCAACCAGCATCTGAGGCTGAATGTTACCTCATCTGAGGCCTaGGCGATGTCCTTGGCACAC +
Preference number: 5 (lower is better)
Translates to: GPTSNTGCPSNQHLRLNVTSSEA*AMSLAH
Trigger: GTGTGCCAAGGACATCGCCAAGGCCTCAGATGAGGT...AACATTCAGCCTCAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp TCAATCCACCGCTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGAGGTCAGGAATGGCTTaGCCGTCCACCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SIHRCACSILPSRCTAALRSGMA*PSTSPS
Trigger: GGAGGGCGAGGTGGACGGCAAAGCCATTCCTGACCT...CAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATCCAACCCGGACGAGGTaGCTGACGGCCGCCTGCACG +
Preference number: 5 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDPTRTR*LTAACT
Trigger: CGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGTTGG...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACGCTGCCTGGACAAGCTaGGTGCAAGCATTCTCAACC +
Preference number: 5 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYAAWTS*VQAFST
Trigger: GGTTGAGAATGCTTGCACCAAGCTTGTCCAGGCAGC...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTTCACGGAGCCAACCTTaGGCCTGGTTCAGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: KVYSCFGRSAVGHSPVGFSRSQP*AWFSLE
Trigger: CTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGA...AAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAATCTCCCTGCGTTCTTaGCCTGCACAGAGTTCACCA +
Preference number: 5 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSISLRS*PAQSSP
Trigger: TGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGAT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CTCATCAAATACCTCTTCCCTGTTAGGCGCATCAGGAGGCGCCGTGGCTGCCACATCTCCCTGCGTTCTTaGCCTGCACAGAGTTCACCA +
Preference number: 5 (lower is better)
Translates to: LIKYLFPVRRIRRRRGCHISLRS*PAQSSP
Trigger: TGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGAT...GTGGCAGCCACGGCGCCTCCTGATGCGCCTAACAGGGAAGAGGTATTTGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CCTCAAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGATCTGCCCTAGCATTTaGCAAGTTCCCAGAATCTCC +
Preference number: 5 (lower is better)
Translates to: PQGVQLLWPVCCWPQPGWICPSI*QVPRIS
Trigger: GGAGATTCTGGGAACTTGCAAAATGCTAGGGCAGAT...CCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCGTCATGGCTTCCAGCTaGCGAGCTGCATTTTCCACT +
Preference number: 5 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFVMASS*RAAFST
Trigger: AGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGAC...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAACCAGCAGGATCCGGTaGGCCCGACGAGCAATACTG +
Preference number: 5 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLTSRIR*ARRAIL
Trigger: CAGTATTGCTCGTCGGGCCAACCGGATCCTGCTGGT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp GATGTCCTTGGCACACTGAATGAGTGCCCGCTTGGTACCACTGCCCCCTCTTACAGCAGAGCCATGCGCTaGGCTGCTGCAATGATGTCA +
Preference number: 5 (lower is better)
Translates to: DVLGTLNECPLGTTAPSYSRAMR*AAAMMS
Trigger: TGACATCATTGCAGCAGCCAAGCGCATGGCTCTGCT...GTAAGAGGGGGCAGTGGTACCAAGCGGGCACTCATTCAGTGTGCCAAGGACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CGGCTTGCTGGACCATTTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATTGCTTGGCAACCTCCTaGGCCAACCGAGTCACCTCA +
Preference number: 5 (lower is better)
Translates to: RLAGPFASFIMELSGSHHCLATS*ANRVTS
Trigger: TGAGGTGACTCGGTTGGCCAAGGAGGTTGCCAAGCA...ATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACACCAACCCGGACGAGGTaGCTGACGGCCGCCTGCACG +
Preference number: 5 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTPTRTR*LTAACT
Trigger: CGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGTTGG...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AAGGTGTACAGCTGCTTTGGCCGGTCTGCTGTTGGCCACAGCCCGGTTGGTTTTCTTCCGGTCCACCATTaGGATCTGCAAGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: KVYSCFGRSAVGHSPVGFLPVHH*DLQASS
Trigger: AGAACTGGCTTGCAGATCCAAATGGTGGACCGGAAG...AAAACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCATGTGCTTGCTCAATCTaGCCCTCAAGGTGTACAGCT +
Preference number: 5 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSCACSI*PSRCTA
Trigger: AGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACA...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTATCCTCATCACTGATGTaGGTCCGGCCCAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLSSSLM*VRPSMV
Trigger: CACCATGCTGGGCCGGACCAACATCAGTGATGAGGA...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCGTAGATGCAGAGAGCTaGGTTGTAGTTGGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFVDAES*VVVGCR
Trigger: CCTGCAACCAACTACAACCAAGCTCTCTGCATCTAC...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS TCA 90 bp TTGAAGCAGCTTCAGCTTCCCGCACAGTCTCCTTCACAGACTGCATaGGGTTCTGGGCATTGTGAACCAGCATCTCTGTGGCCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LKQLQLPAQSPSQTA*GSGHCEPASLWPAQ
Trigger: CTGAGCAGGCCACAGAGATGCTGGTTCACAATGCCCAGAACCTCATGCAGTCTGTGAAGGAGACTGTGCGGGAAGCTGAAGCTGCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000623461.3
CDS-3UTR CAA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTGCCGTGGCCACCTGTTaGGCCAAGGCTCGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: STRILVCKYHSPLGRKCPAVATC*AKARAS
Trigger: AGAGGCTCGAGCCTTGGCCAAACAGGTGGCCACGGC...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTTTGGCCGGTCTGCTGTaGGCCACAGCCCGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVLAGLL*ATARLV
Trigger: AACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAA...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGACCAGCAGGATCCGGTaGGCCCGACGAGCAATACTG +
Preference number: 5 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRTSRIR*ARRAIL
Trigger: CAGTATTGCTCGTCGGGCCAACCGGATCCTGCTGGT...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTATTCCAGCCACAGCTTTaGCATCCATCACCATCGGGG +
Preference number: 5 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLFQPQL*HPSPSG
Trigger: CCCCGATGGTGATGGATGCAAAAGCTGTGGCTGGAA...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAGTCAGGCTCCTGAGGTaGGAAGGCTTCTCTGACCTT +
Preference number: 5 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLVRLLR*EGFSDL
Trigger: AAGGTCAGAGAAGCCTTCCAACCTCAGGAGCCTGAC...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ACCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCGCTGCAATGATGTCATaGCCCTTACTAGACCACTTG +
Preference number: 5 (lower is better)
Translates to: TLATLPFQWQRAPGHSVFAAMMS*PLLDHL
Trigger: CAAGTGGTCTAGTAAGGGCAATGACATCATTGCAGC...GAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR CAA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAAGCAGAGCCATGCGCTaGGCTGCTGCAATGATGTCA +
Preference number: 5 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRSRAMR*AAAMMS
Trigger: TGACATCATTGCAGCAGCCAAGCGCATGGCTCTGCT...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CAGGCAGAGGTGGTTTGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAATCCTCATCACTGATGTaGGTCCGGCCCAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: QAEVVWEEQAHLLVGVVQSSSLM*VRPSMV
Trigger: CACCATGCTGGGCCGGACCAACATCAGTGATGAGGA...TTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGCCCTTGCTGGACCATTaGCGAGCTTCATCATGGAGC +
Preference number: 5 (lower is better)
Translates to: RKEKQREVSPREQGQSRVPLLDH*RASSWS
Trigger: GCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGGG...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGGTCACGGAGCCAACCTTTGGCCTGGTTCAGTTTGGAGTCTATGGAGGCCAAATGCTCTGCTTTGAGTaGGTCATGGCTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RVTEPTFGLVQFGVYGGQMLCFE*VMASSL
Trigger: CAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCAT...TTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCACAGCATCGATCTTCTTaGCAATGCTCTGCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSQHRSS*QCSALS
Trigger: ACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTG...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGCTTCCGGTCCACCATTaGGATCTGCAAGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: RKEKQREVSPREQGQSRVLPVHH*DLQASS
Trigger: AGAACTGGCTTGCAGATCCAAATGGTGGACCGGAAG...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGACTTCCGGTCCACCATTaGGATCTGCAAGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRLPVHH*DLQASS
Trigger: AGAACTGGCTTGCAGATCCAAATGGTGGACCGGAAG...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATTTGGCCGGTCTGCTGTaGGCCACAGCCCGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDLAGLL*ATARLV
Trigger: AACCAACCGGGCTGTGGCCAACAGCAGACCGGCCAA...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGAGGTGTACAGCTGCTTaGGCCGGTCTGCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRRCTAA*AGLLLA
Trigger: GGCCAACAGCAGACCGGCCAAAGCAGCTGTACACCT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGCTTGGCGAGAAGATCTaGCCGATAAGGCCCCATCAT +
Preference number: 5 (lower is better)
Translates to: RKEKQREVSPREQGQSRVLGEKI*PIRPHH
Trigger: ATGATGGGGCCTTATCGGCAAGATCTTCTCGCCAAG...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGCCTCACGGAACTTGGGATCCTCGGAATTCTCCACCTCCCTCTTAGCCACCAGGCATCCAACAGAGATTaGGTATCAATGGCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: SLTELGILGILHLPLSHQASNRD*VSMASS
Trigger: GGACGAAGCCATTGATACCAAATCTCTGTTGGATGC...CTGGTGGCTAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCACAGCCTCACGGAACTaGGGATCCTCGGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLTASRN*GSSEFS
Trigger: GGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGT...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TCAATCCACCGCTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGACAGCCTCACGGAACTaGGGATCCTCGGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: SIHRCACSILPSRCTAALTASRN*GSSEFS
Trigger: GGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGT...CAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp GGCCCGACGAGCAATACTGGTTGCCCCAGCAACCAGCATCTGAGGCTGAATGTTACTGTGGACAGGATTTaGAGCTGGGTGCTTATGGTT +
Preference number: 5 (lower is better)
Translates to: GPTSNTGCPSNQHLRLNVTVDRI*SWVLMV
Trigger: AACCATAAGCACCCAGCTCAAAATCCTGTCCACAGT...AACATTCAGCCTCAGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTCGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAAAACCCATTACTCTCTaGAACCCCATACTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSKPITL*NPILGS
Trigger: ACTCCCAAGTATGGGGTTCAAGAGAGTAATGGGTTT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAAATTCAGTAGCAGCCTaGGCCTTTCCCTTAACTCAA +
Preference number: 5 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSNSVAA*AFPLTQ
Trigger: TTGAGTTAAGGGAAAGGCCAAGGCTGCTACTGAATT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACAGGTCAGGAATGGCTTaGCCGTCCACCTCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHRSGMA*PSTSPS
Trigger: GGAGGGCGAGGTGGACGGCAAAGCCATTCCTGACCT...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTATTGGCCTGGTTCAGTTaGGAGTCTATGGAGGCCAAT +
Preference number: 5 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLLAWFS*ESMEAN
Trigger: ATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAA...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACATCACGGAGCCAACCTTaGGCCTGGTTCAGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTSRSQP*AWFSLE
Trigger: CTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGA...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGGCCGTGGCCACCTGTTaGGCCAAGGCTCGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKAVATC*AKARAS
Trigger: AGAGGCTCGAGCCTTGGCCAAACAGGTGGCCACGGC...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CACGGTCATCCACTGTGGGATTATCAATCCACCGCTGTGCTTGCTCAATCTTGCAATCCACCGCTGTGCTaGCTCAATCTTGCCCTCAAG +
Preference number: 5 (lower is better)
Translates to: HGHPLWDYQSTAVLAQSCNPPLC*LNLALK
Trigger: CTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATT...GCAAGATTGAGCAAGCACAGCGGTGGATTGATAATCCCACAGTGGATGACCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACATCCACTCGGTCACACTaGGCGAGAAGATCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTSTRSH*ARRSCR
Trigger: TCGGCAAGATCTTCTCGCCAAGTGTGACCGAGTGGA...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp TTCTCGGCCGTAGCACCAAGCTTTCCTGAATGGTTTTCAAAGTTAGCTGCCCTCTCCACTCGGTCACACTaGGCGAGAAGATCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: FSAVAPSFPEWFSKLAALSTRSH*ARRSCR
Trigger: TCGGCAAGATCTTCTCGCCAAGTGTGACCGAGTGGA...GAGGGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCTACGGCCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACAGACGAGCAATACTGGTaGCCCCAGCAACCAGCATCT +
Preference number: 5 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTDEQYW*PQQPAS
Trigger: AGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTC...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp TTCTCGGCCGTAGCACCAAGCTTTCCTGAATGGTTTTCAAAGTTAGCTGCCCTCGTCAGGCTCCTGAGGTaGGAAGGCTTCTCTGACCTT +
Preference number: 5 (lower is better)
Translates to: FSAVAPSFPEWFSKLAALVRLLR*EGFSDL
Trigger: AAGGTCAGAGAAGCCTTCCAACCTCAGGAGCCTGAC...GAGGGCAGCTAACTTTGAAAACCATTCAGGAAAGCTTGGTGCTACGGCCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCCCCTTACTAGACCACTaGGTAGCTTCCCGATGCAAG +
Preference number: 5 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLPLLDH*VASRCK
Trigger: CTTGCATCGGGAAGCTACCAAGTGGTCTAGTAAGGG...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR CAA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTTGCTTGGCAACCTCCTaGGCCAACCGAGTCACCTCA +
Preference number: 5 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVCLATS*ANRVTS
Trigger: TGAGGTGACTCGGTTGGCCAAGGAGGTTGCCAAGCA...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGTCCTCATCACTGATGTaGGTCCGGCCCAGCATGGTG +
Preference number: 5 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRSSSLM*VRPSMV
Trigger: CACCATGCTGGGCCGGACCAACATCAGTGATGAGGA...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CCCTGGCTACTCTGCCCTTCCAGTGGCAGAGAGCACCAGGACACAGTGTGTTCAAAGGACCAACTTAAGTaGTACACATTCGATGTTGGG +
Preference number: 5 (lower is better)
Translates to: PWLLCPSSGREHQDTVCSKDQLK*YTFDVG
Trigger: CCCAACATCGAATGTGTACAACTTAAGTTGGTCCTT...TGAACACACTGTGTCCTGGTGCTCTCTGCCACTGGAAGGGCAGAGTAGCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGATGATGTCATTGCCCTaGCTGGACCATTTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: RKEKQREVSPREQGQSRVMMSLP*LDHLRA
Trigger: AGCTCGCAAATGGTCCAGCAAGGGCAATGACATCAT...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS CCA 90 bp GCAATGATGTCATTGCCCTTGCTGGACCATTTGCGAGCTTCATCATaGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: AMMSLPLLDHLRASS*SCLAAIIIGWLITS
Trigger: GGAGGTGATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGGGCAATGACATCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372755.7
ENST00000623461.3
CDS-3UTR CAA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGGCTGCCTGGACAAGCTaGGTGCAAGCATTCTCAACC +
Preference number: 5 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRAAWTS*VQAFST
Trigger: GGTTGAGAATGCTTGCACCAAGCTTGTCCAGGCAGC...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTGTCATGGCTTCCAGCTaGCGAGCTGCATTTTCCACT +
Preference number: 5 (lower is better)
Translates to: MVAFTVDRILSWVLMVGIVMASS*RAAFST
Trigger: AGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGAC...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCATGCTCTGCTTTGAGTaGGTCATGGCTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLMLCFE*VMASSL
Trigger: CAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCAT...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTACAGCCCGGTTGGTTTaGGTCTGCAGGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: STRILVCKYHSPLGRKCPTARLV*VCRFCR
Trigger: CCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGTCCACTCGGTCACACTaGGCGAGAAGATCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRSTRSH*ARRSCR
Trigger: TCGGCAAGATCTTCTCGCCAAGTGTGACCGAGTGGA...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTGGCTTGCTGGACCATTaGCGAGCTTCATCATGGAGC +
Preference number: 5 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVGLLDH*RASSWS
Trigger: GCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGCC...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000211998.10
CDS-3UTR CAA 90 bp GAGTCATGGCCTCCTGCATCCGAGCTTTTAGATCCTTTAAGGAGTCTTGGAGCTCCCTTACTAGACCACTaGGTAGCTTCCCGATGCAAG +
Preference number: 5 (lower is better)
Translates to: ESWPPASELLDPLRSLGAPLLDH*VASRCK
Trigger: CTTGCATCGGGAAGCTACCAAGTGGTCTAGTAAGGG...AGCTCCAAGACTCCTTAAAGGATCTAAAAGCTCGGATGCAGGAGGCCATGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGTTATCTGTGCACTGCTaGGCAACCTCCTTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRLSVHC*ATSLAN
Trigger: GTTGGCCAAGGAGGTTGCCAAGCAGTGCACAGATAA...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAACTGTGGACAGGATTTaGAGCTGGGTGCTTATGGTT +
Preference number: 5 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLTVDRI*SWVLMV
Trigger: AACCATAAGCACCCAGCTCAAAATCCTGTCCACAGT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTCCTGGGCCCTGGGTCTaGGGATTCTGGAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: STRILVCKYHSPLGRKCPPGPWV*GFWKSE
Trigger: TTCACTCTTCCAGAATCCCAAGACCCAGGGCCCAGG...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TTCCAAAATTCCTTTGCAAACTCTAATAATTTTACGGACCTCAGCCTCATCGAACAACCCCGGACGAGGTaGCTGACGGCCGCCTGCACG +
Preference number: 5 (lower is better)
Translates to: FQNSFANSNNFTDLSLIEQPRTR*LTAACT
Trigger: CGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGGTTG...TTCGATGAGGCTGAGGTCCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS TCA 90 bp ACTGAGCACCCAATGGAAGTCATACAACAAAATCCCTTCTTTAGTTaGCTACCAGCCTTCTGGCTGGCCCTGGAGACATTGGGGTCACAC +
Preference number: 5 (lower is better)
Translates to: TEHPMEVIQQNPFFS*LPAFWLALETLGSH
Trigger: GTGTGACCCCAATGTCTCCAGGGCCAGCCAGAAGGCTGGTAGTCAACTAAAGAAGGGATTTTGTTGTATGACTTCCATTGGGTGCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS-3UTR CAA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGACTGATCCTCAGTGGTTaGAACAGTCTCTTTTCCAAC +
Preference number: 5 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRLILSG*NSLFSN
Trigger: GTTGGAAAAGAGACTGTTCAAACCACTGAGGATCAG...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGCTCTCGTCAATCATCTaGGCCATCTTAGTCATTCCT +
Preference number: 5 (lower is better)
Translates to: RKEKQREVSPREQGQSRVLSSII*AILVIP
Trigger: AGGAATGACTAAGATGGCCAAGATGATTGACGAGAG...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATTCACGGAGCCAACCTTaGGCCTGGTTCAGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDSRSQP*AWFSLE
Trigger: CTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGA...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCATCTGCCCTAGCATTTaGCAAGTTCCCAGAATCTCC +
Preference number: 5 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLICPSI*QVPRIS
Trigger: GGAGATTCTGGGAACTTGCAAAATGCTAGGGCAGAT...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGACAGCCCGGTTGGTTTaGGTCTGCAGGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWTARLV*VCRFCR
Trigger: CCTGCAGAACCTGCAGACCAAAACCAACCGGGCTGT...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACATTGGCCACAGCCCGGTaGGTTTTGGTCTGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTLATAR*VLVCRF
Trigger: GAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAA...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGTTGGCCACAGCCCGGTaGGTTTTGGTCTGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVLATAR*VLVCRF
Trigger: GAACCTGCAGACCAAAACCAACCGGGCTGTGGCCAA...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCTTGGCCATAGCTACCTaGCACTTGTCCAGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLLAIAT*HLSRSF
Trigger: AAAAGACCTGGACAAGTGCAAGGTAGCTATGGCCAA...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CAGGCAGAGGTGGTTTGGGAGGAGCAAGCTCATCTGTTAGTCGGAGTTGTTCAATTGGCCATAGCTACCTaGCACTTGTCCAGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: QAEVVWEEQAHLLVGVVQLAIAT*HLSRSF
Trigger: AAAAGACCTGGACAAGTGCAAGGTAGCTATGGCCAA...TTGAACAACTCCGACTAACAGATGAGCTTGCTCCTCCCAAACCACCTCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCATCGGGGAGATGGTTTaGCTCAATTCATCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLIGEMV*LNSSEA
Trigger: TGCCTCTGATGAATTGAGCAAAACCATCTCCCCGAT...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTTGGTCATGGCTTTTCCAGCCACAGCTTTaGCATCCATCACCATCGGGG +
Preference number: 5 (lower is better)
Translates to: SEQHRSSLQCSALSWSWLFQPQL*HPSPSG
Trigger: CCCCGATGGTGATGGATGCAAAAGCTGTGGCTGGAA...AAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp TCAATCCACCGCTGTGCTTGCTCAATCTTGCCCTCAAGGTGTACAGCTGCTTTGGCTGCAATGATGTCATaGCCCTTACTAGACCACTTG +
Preference number: 5 (lower is better)
Translates to: SIHRCACSILPSRCTAALAAMMS*PLLDHL
Trigger: CAAGTGGTCTAGTAAGGGCAATGACATCATTGCAGC...CAAAGCAGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGTGCTTGGCAACCTCCTaGGCCAACCGAGTCACCTCA +
Preference number: 5 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVCLATS*ANRVTS
Trigger: TGAGGTGACTCGGTTGGCCAAGGAGGTTGCCAAGCA...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAATCCCCAGGGTTGTCTaGTATTACACACATCCTTGT +
Preference number: 5 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLIPRVV*YYTHPC
Trigger: ACAAGGATGTGTGTAATACAAGACAACCCTGGGGAT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp TCAGTGTCCTTGCTGGCCCAGGCATCTTCATCCCAAGAGGTGAGTTGTAACACACTCTCGTCAATCATCTaGGCCATCTTAGTCATTCCT +
Preference number: 5 (lower is better)
Translates to: SVSLLAQASSSQEVSCNTLSSII*AILVIP
Trigger: AGGAATGACTAAGATGGCCAAGATGATTGACGAGAG...TGTGTTACAACTCACCTCTTGGGATGAAGATGCCTGGGCCAGCAAGGACACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTATGCTCTGCTTTGAGTaGGTCATGGCTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVMLCFE*VMASSL
Trigger: CAAGCTGGAAGCCATGACCAACTCAAAGCAGAGCAT...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TTCCAAAATTCCTTTGCAAACTCTAATAATTTTACGGACCTCAGCCTCATCGAAGCCGTGGCCACCTGTTaGGCCAAGGCTCGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: FQNSFANSNNFTDLSLIEAVATC*AKARAS
Trigger: AGAGGCTCGAGCCTTGGCCAAACAGGTGGCCACGGC...TTCGATGAGGCTGAGGTCCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp TGTAAGAGGTTGGTTCTAATCCGTTTATCTGTGCACTGCTTGGCAACCTCCTTGCTTGGCGAGAAGATCTaGCCGATAAGGCCCCATCAT +
Preference number: 5 (lower is better)
Translates to: CKRLVLIRLSVHCLATSLLGEKI*PIRPHH
Trigger: ATGATGGGGCCTTATCGGCAAGATCTTCTCGCCAAG...CAAGGAGGTTGCCAAGCAGTGCACAGATAAACGGATTAGAACCAACCTCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AGGAAAGAGAAACAGAGGGAAGTGTCCCCTAGGGAACAAGGGCAGAGCAGAGTGATGTTCATAAGCAGCTaGATTTCCAGGGTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: RKEKQREVSPREQGQSRVMFISS*ISRVPK
Trigger: CTTAGGAACCCTGGAAATCAAGCTGCTTATGAACAT...CACTCTGCTCTGCCCTTGTTCCCTAGGGGACACTTCCCTCTGTTTCTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGGCATCCAACAGAGATTaGGTATCAATGGCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRASNRD*VSMASS
Trigger: GGACGAAGCCATTGATACCAAATCTCTGTTGGATGC...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACAGCATCCAACAGAGATTaGGTATCAATGGCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTASNRD*VSMASS
Trigger: GGACGAAGCCATTGATACCAAATCTCTGTTGGATGC...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGGACGAGCAATACTGGTaGCCCCAGCAACCAGCATCT +
Preference number: 5 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWDEQYW*PQQPAS
Trigger: AGATGCTGGTTGCTGGGGCAACCAGTATTGCTCGTC...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACACAGCCTCACGGAACTaGGGATCCTCGGAATTCTCC +
Preference number: 5 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHTASRN*GSSEFS
Trigger: GGAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGT...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp TTGCGAGCTTCATCATGGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTAATCATCGGGGAGATGGTTTaGCTCAATTCATCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: LRASSWSCLAAIIIGWLIIGEMV*LNSSEA
Trigger: TGCCTCTGATGAATTGAGCAAAACCATCTCCCCGAT...GATTAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTGTCCAGGAAGCTCTTTaGCAGTCCAGGGTCGGAAAT +
Preference number: 5 (lower is better)
Translates to: STRILVCKYHSPLGRKCPVQEAL*QSRVGN
Trigger: ATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGAC...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTTGGTCATGGCTTGCTGGGTGCTTATGGTaGGGATTCGCTCACATACCT +
Preference number: 5 (lower is better)
Translates to: SEQHRSSLQCSALSWSWLAGCLW*GFAHIP
Trigger: AGGTATGTGAGCGAATCCCAACCATAAGCACCCAGC...AAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGCCTGGGCCCTGGGTCTaGGGATTCTGGAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKPGPWV*GFWKSE
Trigger: TTCACTCTTCCAGAATCCCAAGACCCAGGGCCCAGG...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTTCAGACAGGGCTGCCTaGCCATTAAACACTCTTAGG +
Preference number: 5 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVSDRAA*PLNTLR
Trigger: CCTAAGAGTGTTTAATGGCAAGGCAGCCCTGTCTGA...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGCTTGGTTGTAGTTGGTaGCAGGGAGGTAGGAATTAC +
Preference number: 5 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRLGCSW*QGGRNY
Trigger: GTAATTCCTACCTCCCTGCAACCAACTACAACCAAG...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCAAACCCATTACTCTCTaGAACCCCATACTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLKPITL*NPILGS
Trigger: ACTCCCAAGTATGGGGTTCAAGAGAGTAATGGGTTT...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACACACTGCCCTCTCATTTaGCCTAGTAGGAACTTACTG +
Preference number: 5 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTHCPLI*PSRNLL
Trigger: CAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTG...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp AAGAGGCCCCCATTCCTTTCTGATGTGCCAGGCCAGGATGTGATTTTTCAGCTCTGTACACATTCGATGTaGGGAACTAACACACAGCGA +
Preference number: 5 (lower is better)
Translates to: KRPPFLSDVPGQDVIFQLCTHSM*GTNTQR
Trigger: TCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACA...GAGCTGAAAAATCACATCCTGGCCTGGCACATCAGAAAGGAATGGGGGCCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp GGGACGGGAAGTTTCCCTAGCACAGACATTGCTCAGGGGCATGGTAAAAGCAGAAAGGACCAACTTAAGTaGTACACATTCGATGTTGGG +
Preference number: 5 (lower is better)
Translates to: GTGSFPSTDIAQGHGKSRKDQLK*YTFDVG
Trigger: CCCAACATCGAATGTGTACAACTTAAGTTGGTCCTT...TCTGCTTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGAAACTTCCCGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS TCA 90 bp TCTAACCCAGCGCAGTGTAAATCCAGCATCTGTTCGAATTTTGATTaGAGCAGCTTCAGCTTCCCGCACAGTCTCCTTCACAGACTGCAT +
Preference number: 5 (lower is better)
Translates to: SNPAQCKSSICSNFD*SSFSFPHSLLHRLH
Trigger: ATGCAGTCTGTGAAGGAGACTGTGCGGGAAGCTGAAGCTGCTTCAATCAAAATTCGAACAGATGCTGGATTTACACTGCGCTGGGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000623461.3
CDS-3UTR CAA 90 bp TCTGAGCAGCATCGATCTTCTTTGCAATGCTCTGCTTTGAGTTGGTCATGGCTTTTGGCCTGGTTCAGTTaGGAGTCTATGGAGGCCAAT +
Preference number: 5 (lower is better)
Translates to: SEQHRSSLQCSALSWSWLLAWFS*ESMEAN
Trigger: ATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAA...AAGCCATGACCAACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACATCTCCCTGCGTTCTTaGCCTGCACAGAGTTCACCA +
Preference number: 5 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHISLRS*PAQSSP
Trigger: TGGTGAACTCTGTGCAGGCAAAGAACGCAGGGAGAT...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGTCATGGCTTCCAGCTaGCGAGCTGCATTTTCCACT +
Preference number: 5 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTVMASS*RAAFST
Trigger: AGTGGAAAATGCAGCTCGCAAGCTGGAAGCCATGAC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ATGGTGGCCTTCACTGTGGACAGGATTTTGAGCTGGGTGCTTATGGTTGGGATTCAGCATCGATCTTCTTaGCAATGCTCTGCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: MVAFTVDRILSWVLMVGIQHRSS*QCSALS
Trigger: ACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTG...AATCCCAACCATAAGCACCCAGCTCAAAATCCTGTCCACAGTGAAGGCCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATTGTGCTTGCTCAATCTaGCCCTCAAGGTGTACAGCT +
Preference number: 5 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDCACSI*PSRCTA
Trigger: AGCTGTACACCTTGAGGGCAAGATTGAGCAAGCACA...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAAATCCACCGCTGTGCTaGCTCAATCTTGCCCTCAAG +
Preference number: 5 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTNPPLC*LNLALK
Trigger: CTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATT...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGAATCCACCGCTGTGCTaGCTCAATCTTGCCCTCAAG +
Preference number: 5 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVNPPLC*LNLALK
Trigger: CTTGAGGGCAAGATTGAGCAAGCACAGCGGTGGATT...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp TTCATCAGAGGCAGCTTTCACAGCCTCACGGAACTTGGGATCCTCGGAATTCTCATGTTCATAAGCAGCTaGATTTCCAGGGTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: FIRGSFHSLTELGILGILMFISS*ISRVPK
Trigger: CTTAGGAACCCTGGAAATCAAGCTGCTTATGAACAT...GAGAATTCCGAGGATCCCAAGTTCCGTGAGGCTGTGAAAGCTGCCTCTGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTTTGGCCATAGCTACCTaGCACTTGTCCAGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVLAIAT*HLSRSF
Trigger: AAAAGACCTGGACAAGTGCAAGGTAGCTATGGCCAA...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTATCGGGGAGATGGTTTaGCTCAATTCATCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVIGEMV*LNSSEA
Trigger: TGCCTCTGATGAATTGAGCAAAACCATCTCCCCGAT...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGTCCAGGAAGCTCTTTaGCAGTCCAGGGTCGGAAAT +
Preference number: 5 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTVQEAL*QSRVGN
Trigger: ATTTCCGACCCTGGACTGCAAAAGAGCTTCCTGGAC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGTTATCTGTGCACTGCTaGGCAACCTCCTTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWLSVHC*ATSLAN
Trigger: GTTGGCCAAGGAGGTTGCCAAGCAGTGCACAGATAA...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGCTGGGTGCTTATGGTaGGGATTCGCTCACATACCT +
Preference number: 5 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTAGCLW*GFAHIP
Trigger: AGGTATGTGAGCGAATCCCAACCATAAGCACCCAGC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATTCAGACAGGGCTGCCTaGCCATTAAACACTCTTAGG +
Preference number: 5 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDSDRAA*PLNTLR
Trigger: CCTAAGAGTGTTTAATGGCAAGGCAGCCCTGTCTGA...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTCAGGTGTACACATTCGATGTaGGGAACTAACACACAGCGA +
Preference number: 5 (lower is better)
Translates to: IRCWELTHSDGWEGRMFRCTHSM*GTNTQR
Trigger: TCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACA...CCTGAACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS GCA 90 bp CCAAAGAAATCACTCAATATGAGCCACAGTCAGTCTCCCCAGCACTaGCTAGAGTCCCGTATTAAATCACATTCTGACGCACATTCAAGC +
Preference number: 5 (lower is better)
Translates to: PKKSLNMSHSQSPQH*LESRIKSHSDAHSS
Trigger: GCTTGAATGTGCGTCAGAATGTGATTTAATACGGGACTCTAGGCAGTGCTGGGGAGACTGACTGTGGCTCATATTGAGTGATTTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS-3UTR CAA 90 bp TCAGTGTCCTTGCTGGCCCAGGCATCTTCATCCCAAGAGGTGAGTTGTAACACACATACCTGTAAGAGGTaGGTTCTAATCCGTTTATCT +
Preference number: 5 (lower is better)
Translates to: SVSLLAQASSSQEVSCNTHTCKR*VLIRLS
Trigger: AGATAAACGGATTAGAACCAACCTCTTACAGGTATG...TGTGTTACAACTCACCTCTTGGGATGAAGATGCCTGGGCCAGCAAGGACACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTACTGTGGACAGGATTTaGAGCTGGGTGCTTATGGTT +
Preference number: 5 (lower is better)
Translates to: STRILVCKYHSPLGRKCPTVDRI*SWVLMV
Trigger: AACCATAAGCACCCAGCTCAAAATCCTGTCCACAGT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGGGAAGGAAGGTATGGTaGGCAGCAACATGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWGRKVW*AATWKA
Trigger: AGCTTTCCATGTTGCTGCCAACCATACCTTCCTTCC...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGGGAAGGAAGGTATGGTaGGCAGCAACATGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVGRKVW*AATWKA
Trigger: AGCTTTCCATGTTGCTGCCAACCATACCTTCCTTCC...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGACCAACTTAAGTTGTACACATTCGATGTTGGGAACTAACACACAGCGATGGTCCCTAGCACAGACATaGCTCAGGGGCATGGTAAAA +
Preference number: 5 (lower is better)
Translates to: RTNLSCTHSMLGTNTQRWSLAQT*LRGMVK
Trigger: TTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGA...CCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGTACAACTTAAGTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TTGCCACTTCCATTCCTTCAAGTGTGTAATCCCCAGGGTTGTCTTGTATTACACTCCCTAGCACAGACATaGCTCAGGGGCATGGTAAAA +
Preference number: 5 (lower is better)
Translates to: LPLPFLQVCNPQGCLVLHSLAQT*LRGMVK
Trigger: TTTTACCATGCCCCTGAGCAATGTCTGTGCTAGGGA...GTGTAATACAAGACAACCCTGGGGATTACACACTTGAAGGAATGGAAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGTAGATGCAGAGAGCTaGGTTGTAGTTGGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTVDAES*VVVGCR
Trigger: CCTGCAACCAACTACAACCAAGCTCTCTGCATCTAC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAGCTGCAATGATGTCATaGCCCTTGCTGGACCATTTG +
Preference number: 5 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTAAMMS*PLLDHL
Trigger: CAAATGGTCCAGCAAGGGCAATGACATCATTGCAGC...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp TACCACTCTCCCTTAGGCAGGAAGTGTCCTTCAGACAGGGCTGCCTTGCCATTAATTCTATACTGGGCTTaGGAATATGAAAAATGGACC +
Preference number: 5 (lower is better)
Translates to: YHSPLGRKCPSDRAALPLILYWA*EYEKWT
Trigger: GGTCCATTTTTCATATTCCAAAGCCCAGTATAGAAT...TAATGGCAAGGCAGCCCTGTCTGAAGGACACTTCCTGCCTAAGGGAGAGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS GCA 90 bp AGTCAAATTCACAGAGACAGAAAGAATGGTGGTTGCTGGGCCCTGTaGTGTGCATCTGTGTATTTATCTAGCGCAAATGCCTATTGTGGT +
Preference number: 5 (lower is better)
Translates to: SQIHRDRKNGGCWAL*CASVYLSSANAYCG
Trigger: ACCACAATAGGCATTTGCGCTAGATAAATACACAGATGCACAGCACAGGGCCCAGCAACCACCATTCTTTCTGTCTCTGTGAATTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS-3UTR CAA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATCTGATCCTCAGTGGTTaGAACAGTCTCTTTTCCAAC +
Preference number: 5 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDLILSG*NSLFSN
Trigger: GTTGGAAAAGAGACTGTTCAAACCACTGAGGATCAG...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ATTCTGAGCTTATGTGAAGTCCATGGGCTAGAAACCCAGTCTGCCTATTGGGATCAGAGAGGATGCCCCTaGACCCATCAATTAGATAAT +
Preference number: 5 (lower is better)
Translates to: ILSLCEVHGLETQSAYWDQRGCP*THQLDN
Trigger: ATTATCTAATTGATGGGTCAAGGGGCATCCTCTCTG...ATCCCAATAGGCAGACTGGGTTTCTAGCCCATGGACTTCACATAAGCTCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATATGGCTTCAGTGTCCTaGCTGGCCCAGGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDMASVS*LAQASS
Trigger: TGAAGATGCCTGGGCCAGCAAGGACACTGAAGCCAT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGTAGATGCAGAGAGCTTGGTTGTAGTTGGTTGCAGGGAGGTAGGAATTACAGGATGTTCATAAGCAGCTaGATTTCCAGGGTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: SRCRELGCSWLQGGRNYRMFISS*ISRVPK
Trigger: CTTAGGAACCCTGGAAATCAAGCTGCTTATGAACAT...CCTGTAATTCCTACCTCCCTGCAACCAACTACAACCAAGCTCTCTGCATCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATGTCAGGCTCCTGAGGTaGGAAGGCTTCTCTGACCTT +
Preference number: 5 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDVRLLR*EGFSDL
Trigger: AAGGTCAGAGAAGCCTTCCAACCTCAGGAGCCTGAC...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGTCTCTGTCTTGCAGCAGGGGGAAGGACCTGTGGTACTCCTACAAACTTAACACATACCTGTAAGAGGTaGGTTCTAATCCGTTTATCT +
Preference number: 5 (lower is better)
Translates to: SLCLAAGGRTCGTPTNLTHTCKR*VLIRLS
Trigger: AGATAAACGGATTAGAACCAACCTCTTACAGGTATG...TGTTAAGTTTGTAGGAGTACCACAGGTCCTTCCCCCTGCTGCAAGACAGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS CCA 90 bp ATAAAGTTCAGAATTACAGGCATATCTGTATCTTACTTAGTCAGCTaGGAAGAACCACCCATATACAAGGCAGAGCTCCCATCCACGGGA +
Preference number: 5 (lower is better)
Translates to: IKFRITGISVSYLVS*EEPPIYKAELPSTG
Trigger: TCCCGTGGATGGGAGCTCTGCCTTGTATATGGGTGGTTCTTCCCAGCTGACTAAGTAAGATACAGATATGCCTGTAATTCTGAACTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS CCA 90 bp TACCTTACAGATCCCGGAGAACATACCGTTCTACTGAGCACCCAATaGAAGTCATACAACAAAATCCCTTCTTTAGTTGACTACCAGCCT +
Preference number: 5 (lower is better)
Translates to: YLTDPGEHTVLLSTQ*KSYNKIPSLVDYQP
Trigger: AGGCTGGTAGTCAACTAAAGAAGGGATTTTGTTGTATGACTTCCATTGGGTGCTCAGTAGAACGGTATGTTCTCCGGGATCTGTAAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS-3UTR CAA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACACAGAGAGGATGCCCCTaGACCCATCAATTAGATAAT +
Preference number: 5 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTQRGCP*THQLDN
Trigger: ATTATCTAATTGATGGGTCAAGGGGCATCCTCTCTG...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TTCCAAAATTCCTTTGCAAACTCTAATAATTTTACGGACCTCAGCCTCATCGAAATGGCTTCAGTGTCCTaGCTGGCCCAGGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: FQNSFANSNNFTDLSLIEMASVS*LAQASS
Trigger: TGAAGATGCCTGGGCCAGCAAGGACACTGAAGCCAT...TTCGATGAGGCTGAGGTCCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CAGGCATCTTCATCCCAAGAGGTGAGTTGTAACACACGAATTATCTCATTAATTTTATCTGTGCACTGCTaGGCAACCTCCTTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: QASSSQEVSCNTRIISLILSVHC*ATSLAN
Trigger: GTTGGCCAAGGAGGTTGCCAAGCAGTGCACAGATAA...AATTAATGAGATAATTCGTGTGTTACAACTCACCTCTTGGGATGAAGATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS-3UTR CAA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAGCTGGGTGCTTATGGTaGGGATTCGCTCACATACCT +
Preference number: 5 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKAGCLW*GFAHIP
Trigger: AGGTATGTGAGCGAATCCCAACCATAAGCACCCAGC...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATTTGGCCTGGTTCAGTTaGGAGTCTATGGAGGCCAAT +
Preference number: 5 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDLAWFS*ESMEAN
Trigger: ATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAA...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGGACCTGTGGTACTCCTACAAACTTAACAACTTTAGCTTTTCGGGGAACAGTGGCATCTGTTCGAATTTaGATTGAAGCAGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: RTCGTPTNLTTLAFRGTVASVRI*IEAASA
Trigger: AGCTGAAGCTGCTTCAATCAAAATTCGAACAGATGC...CACTGTTCCCCGAAAAGCTAAAGTTGTTAAGTTTGTAGGAGTACCACAGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS-3UTR CAA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTAAGCTCAAAACAATTTaGGGAGGCACAGCAATTTTC +
Preference number: 5 (lower is better)
Translates to: STRILVCKYHSPLGRKCPKLKTI*GGTAIF
Trigger: GAAAATTGCTGTGCCTCCCAAAATTGTTTTGAGCTT...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp ACACATTCGATGTTGGGAACTAACACACAGCGATGGGTGGGAAGGAAGGATGTTAATATGCTGAGGGCCTaGAAAATAATCATCCTCATT +
Preference number: 5 (lower is better)
Translates to: THSMLGTNTQRWVGRKDVNMLRA*KIIILI
Trigger: AATGAGGATGATTATTTTCAAGGCCCTCAGCATATT...AACATCCTTCCTTCCCACCCATCGCTGTGTGTTAGTTCCCAACATCGAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATATCTGCCCTAGCATTTaGCAAGTTCCCAGAATCTCC +
Preference number: 5 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDICPSI*QVPRIS
Trigger: GGAGATTCTGGGAACTTGCAAAATGCTAGGGCAGAT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACACATACCTGTAAGAGGTaGGTTCTAATCCGTTTATCT +
Preference number: 5 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTHTCKR*VLIRLS
Trigger: AGATAAACGGATTAGAACCAACCTCTTACAGGTATG...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AAAGGAAACACTGCCCTCTCATTTTGCCTAGTAGGAACTTACTGTGGTGATAAGGCATCTGTTCGAATTTaGATTGAAGCAGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: KGNTALSFCLVGTYCGDKASVRI*IEAASA
Trigger: AGCTGAAGCTGCTTCAATCAAAATTCGAACAGATGC...CTTATCACCACAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTGTTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATCACTGCCCTCTCATTTaGCCTAGTAGGAACTTACTG +
Preference number: 5 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDHCPLI*PSRNLL
Trigger: CAGTAAGTTCCTACTAGGCAAAATGAGAGGGCAGTG...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp AGCACTAGAATTCTAGTCTGCAAATACCACTCTCCCTTAGGCAGGAAGTGTCCTGTAAATATACCACTGTaGATTTCTTCTTCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: STRILVCKYHSPLGRKCPVNIPL*ISSSSA
Trigger: TGCACTGGAAGAAGAAATCAACAGTGGTATATTTAC...AGGACACTTCCTGCCTAAGGGAGAGTGGTATTTGCAGACTAGAATTCTAGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372755.7
CDS TCA 90 bp ATTAAACAGAATGGGAACCCAGCAGTCACAGTCAGACAAAAGGTCTaGTTAATTCACTGCTTACAGTGGAGCAATGAAAGATGCGTAATG +
Preference number: 5 (lower is better)
Translates to: IKQNGNPAVTVRQKV*LIHCLQWSNERCVM
Trigger: CATTACGCATCTTTCATTGCTCCACTGTAAGCAGTGAATTAATCAGACCTTTTGTCTGACTGTGACTGCTGGGTTCCCATTCTGTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS-3UTR CAA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATCTCTCGTCAATCATCTaGGCCATCTTAGTCATTCCT +
Preference number: 5 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDLSSII*AILVIP
Trigger: AGGAATGACTAAGATGGCCAAGATGATTGACGAGAG...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CCATTAAACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAACAGCATCGATCTTCTTaGCAATGCTCTGCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: PLNTLRGQALLFLRTEFKQHRSS*QCSALS
Trigger: ACTCAAAGCAGAGCATTGCAAAGAAGATCGATGCTG...TTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTTTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp CAGTCTGCCTATTGGGATAGAGGGTGCACAAGTGTAACTGTGTTTGAGAATACAAATATGCTGAGGGCCTaGAAAATAATCATCCTCATT +
Preference number: 5 (lower is better)
Translates to: QSAYWDRGCTSVTVFENTNMLRA*KIIILI
Trigger: AATGAGGATGATTATTTTCAAGGCCCTCAGCATATT...TGTATTCTCAAACACAGTTACACTTGTGCACCCTCTATCCCAATAGGCAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS-3UTR CAA 90 bp TTCCAAAATTCCTTTGCAAACTCTAATAATTTTACGGACCTCAGCCTCATCGAACAGAGAGGATGCCCCTaGACCCATCAATTAGATAAT +
Preference number: 5 (lower is better)
Translates to: FQNSFANSNNFTDLSLIEQRGCP*THQLDN
Trigger: ATTATCTAATTGATGGGTCAAGGGGCATCCTCTCTG...TTCGATGAGGCTGAGGTCCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS CCA 90 bp TACATCAACACTTATCTACATTTACCAACAAACTGTCCAGTATCTTaGCTCATCATTCCCTCTTGTATTTCAGGCTTACATCTGGGATCA +
Preference number: 5 (lower is better)
Translates to: YINTYLHLPTNCPVS*LIIPSCISGLHLGS
Trigger: TGATCCCAGATGTAAGCCTGAAATACAAGAGGGAATGATGAGCCAAGATACTGGACAGTTTGTTGGTAAATGTAGATAAGTGTTGATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461383.1
CDS-3UTR CAA 90 bp AACACTCTTAGGGGACAAGCACTCCTCTTTCTTAGGACTGAATTTAAAAAGGATAAGCTCAAAACAATTTaGGGAGGCACAGCAATTTTC +
Preference number: 5 (lower is better)
Translates to: NTLRGQALLFLRTEFKKDKLKTI*GGTAIF
Trigger: GAAAATTGCTGTGCCTCCCAAAATTGTTTTGAGCTT...ATCCTTTTTAAATTCAGTCCTAAGAAAGAGGAGTGCTTGTCCCCTAAGAGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000211998.10
ENST00000372755.7
CDS TCA 72 bp GCCACCGGCTCCAGGATGCTCTCGATCGTGCGCGTATaGAACACTGGCATCGCGGCGGCGAGCGGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: ATGSRMLSIVRV*NTGIAAASGAA
Trigger: CGCCGCCCCGCTCGCCGCCGCGATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS CAA 90 bp GCCGCCTGCACGGCGGCCACGGGCGCGGTGAGGTCAGGAATGGCTTaGCCGTCCACCTCGCCCTCCTCGTGCATTATCACCAGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: AACTAATGAVRSGMA*PSTSPSSCIITRWE
Trigger: CTCCCACCTGGTGATAATGCACGAGGAGGGCGAGGTGGACGGCAAAGCCATTCCTGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS GCA 72 bp CATTCTCAACCCCGGACGAGGTTGCTGACGGCCGCCTaGACGGCGGCCACGGGCGCGGTGAGGTCAGGAATG +
Preference number: 6 (lower is better)
Translates to: HSQPRTRLLTAA*TAATGAVRSGM
Trigger: CATTCCTGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGGTTGAGAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS CCA 72 bp CTCCAGGATGCTCTCGATCGTGCGCGTATGAAACACTaGCATCGCGGCGGCGAGCGGGGCGGCGAACCGCGG +
Preference number: 6 (lower is better)
Translates to: LQDALDRARMKH*HRGGERGGEPR
Trigger: CCGCGGTTCGCCGCCCCGCTCGCCGCCGCGATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS GCA 72 bp TCTTTTCCAACCCGGACGAGGTTGCTGACGGCCGCCTaGACGGCGGCCACGGGCGCGGTGAGGTCAGGAATG +
Preference number: 6 (lower is better)
Translates to: SFPTRTRLLTAA*TAATGAVRSGM
Trigger: CATTCCTGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGTTGGAAAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
CDS CAA 72 bp ACGGCGGCCACGGGCGCGGTGAGGTCAGGAATGGCTTaGCCGTCCACCTCGCCCTCCTCGTGCATTATCACC +
Preference number: 6 (lower is better)
Translates to: TAATGAVRSGMA*PSTSPSSCIIT
Trigger: GGTGATAATGCACGAGGAGGGCGAGGTGGACGGCAAAGCCATTCCTGACCTCACCGCGCCCGTGGCCGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS GCA 72 bp TCTGCTGTGCCACCGGCTCCAGGATGCTCTCGATCGTaGGCGTATGAAACACTGGCATCGCGGCGGCGAGCG +
Preference number: 6 (lower is better)
Translates to: SAVPPAPGCSRS*AYETLASRRRA
Trigger: CGCTCGCCGCCGCGATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS CCA 72 bp CCGTCCACCTCGCCCTCCTCGTGCATTATCACCAGGTaGGAGATCTGCTGTGCCACCGGCTCCAGGATGCTC +
Preference number: 6 (lower is better)
Translates to: PSTSPSSCIITR*EICCATGSRML
Trigger: GAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGTGATAATGCACGAGGAGGGCGAGGTGGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS GCA 72 bp CCAGGTGGGAGATCTGCTGTGCCACCGGCTCCAGGATaGTCTCGATCGTGCGCGTATGAAACACTGGCATCG +
Preference number: 6 (lower is better)
Translates to: PGGRSAVPPAPG*SRSCAYETLAS
Trigger: CGATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS GCA 72 bp TCGCCCTCCTCGTGCATTATCACCAGGTGGGAGATCTaGTGTGCCACCGGCTCCAGGATGCTCTCGATCGTG +
Preference number: 6 (lower is better)
Translates to: SPSSCIITRWEI*CATGSRMLSIV
Trigger: CACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGTGATAATGCACGAGGAGGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS GCA 72 bp TCAGGAATGGCTTTGCCGTCCACCTCGCCCTCCTCGTaGATTATCACCAGGTGGGAGATCTGCTGTGCCACC +
Preference number: 6 (lower is better)
Translates to: SGMALPSTSPSS*IITRWEICCAT
Trigger: GGTGGCACAGCAGATCTCCCACCTGGTGATAATGCACGAGGAGGGCGAGGTGGACGGCAAAGCCATTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000478896.2
ENST00000624354.3
CDS GCA 72 bp CTGACTGAAGCATCTGAGCTGCCTGGACAAGCTTGGTaGAAGCATTCTCAACCCCGGACGAGGTTGCTGACG +
Preference number: 6 (lower is better)
Translates to: LTEASELPGQAW*KHSQPRTRLLT
Trigger: CGTCAGCAACCTCGTCCGGGGTTGAGAATGCTTGCACCAAGCTTGTCCAGGCAGCTCAGATGCTTCAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS CCA 72 bp GGTCTGACTGAAGCATCTGAGCTGCCTGGACAAGCTTaGTGCAAGCATTCTCAACCCCGGACGAGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: GLTEASELPGQA*CKHSQPRTRLL
Trigger: CAGCAACCTCGTCCGGGGTTGAGAATGCTTGCACCAAGCTTGTCCAGGCAGCTCAGATGCTTCAGTCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624354.3
CDS CAA 90 bp GGGGAGGCACTAGGGTCACGGAGCCAACCTTTGGCCTGGTTCAGTTaGGAGTCTATGGAGGCCAATGCTCTCTTCATGGCTTCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: GEALGSRSQPLAWFS*ESMEANALFMASVS
Trigger: AGACACTGAAGCCATGAAGAGAGCATTGGCCTCCATAGACTCCAAACTGAACCAGGCCAAAGGTTGGCTCCGTGACCCTAGTGCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS TCA 72 bp CTTCAGCTTCCCGCACAGTCTCCTTCACAGACTGCATaGGGTTCTGGGCATTGTGAACCAGCATCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: LQLPAQSPSQTA*GSGHCEPASLW
Trigger: CCACAGAGATGCTGGTTCACAATGCCCAGAACCTCATGCAGTCTGTGAAGGAGACTGTGCGGGAAGCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000623461.3
CDS CCA 72 bp TCATTGCCCTTGCTGGACCATTTGCGAGCTTCATCATaGAGCTGTCTGGCAGCCATCATCATTGGCTGGTTA +
Preference number: 6 (lower is better)
Translates to: SLPLLDHLRASS*SCLAAIIIGWL
Trigger: TAACCAGCCAATGATGATGGCTGCCAGACAGCTCCATGATGAAGCTCGCAAATGGTCCAGCAAGGGCAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372755.7
ENST00000623461.3
CDS CCA 72 bp AAAATCCCTTCTTTAGTTGACTACCAGCCTTCTGGCTaGCCCTGGAGACATTGGGGTCACACATGGGAAAGC +
Preference number: 6 (lower is better)
Translates to: KIPSLVDYQPSG*PWRHWGHTWES
Trigger: GCTTTCCCATGTGTGACCCCAATGTCTCCAGGGCCAGCCAGAAGGCTGGTAGTCAACTAAAGAAGGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS GCA 72 bp CACAGAGACAGAAAGAATGGTGGTTGCTGGGCCCTGTaGTGTGCATCTGTGTATTTATCTAGCGCAAATGCC +
Preference number: 6 (lower is better)
Translates to: HRDRKNGGCWAL*CASVYLSSANA
Trigger: GGCATTTGCGCTAGATAAATACACAGATGCACAGCACAGGGCCCAGCAACCACCATTCTTTCTGTCTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS CAA 72 bp ACCCAGCGCAGTGTAAATCCAGCATCTGTTCGAATTTaGATTGAAGCAGCTTCAGCTTCCCGCACAGTCTCC +
Preference number: 6 (lower is better)
Translates to: TQRSVNPASVRI*IEAASASRTVS
Trigger: GGAGACTGTGCGGGAAGCTGAAGCTGCTTCAATCAAAATTCGAACAGATGCTGGATTTACACTGCGCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000623461.3
CDS TCA 72 bp GCGCAGTGTAAATCCAGCATCTGTTCGAATTTTGATTaGAGCAGCTTCAGCTTCCCGCACAGTCTCCTTCAC +
Preference number: 6 (lower is better)
Translates to: AQCKSSICSNFD*SSFSFPHSLLH
Trigger: GTGAAGGAGACTGTGCGGGAAGCTGAAGCTGCTTCAATCAAAATTCGAACAGATGCTGGATTTACACTGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000623461.3
CDS GCA 72 bp TCACTCAATATGAGCCACAGTCAGTCTCCCCAGCACTaGCTAGAGTCCCGTATTAAATCACATTCTGACGCA +
Preference number: 6 (lower is better)
Translates to: SLNMSHSQSPQH*LESRIKSHSDA
Trigger: TGCGTCAGAATGTGATTTAATACGGGACTCTAGGCAGTGCTGGGGAGACTGACTGTGGCTCATATTGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS CAA 72 bp GGGATTTTGCTTATTTCTCCACTAAGAACACGTACCTaGCTGGCCCAGGCATCTTCATCCCAAGAGGTGAGT +
Preference number: 6 (lower is better)
Translates to: GILLISPLRTRT*LAQASSSQEVS
Trigger: ACTCACCTCTTGGGATGAAGATGCCTGGGCCAGCAAGGTACGTGTTCTTAGTGGAGAAATAAGCAAAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS CAA 90 bp GTCTTTCTAACCCAGCGCAGTGTAAATCCAGCATCTGTTCGAATTTaGATTGAAGCAGCTTCAGCTTCCCGCACAGTCTCCTTCACAGAC +
Preference number: 6 (lower is better)
Translates to: VFLTQRSVNPASVRI*IEAASASRTVSFTD
Trigger: GTCTGTGAAGGAGACTGTGCGGGAAGCTGAAGCTGCTTCAATCAAAATTCGAACAGATGCTGGATTTACACTGCGCTGGGTTAGAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000211998.10
ENST00000372755.7
ENST00000623461.3
CDS CAA 90 bp GGAGAGTTGGGGATTTTGCTTATTTCTCCACTAAGAACACGTACCTaGCTGGCCCAGGCATCTTCATCCCAAGAGGTGAGTTGTAACACA +
Preference number: 6 (lower is better)
Translates to: GELGILLISPLRTRT*LAQASSSQEVSCNT
Trigger: TGTGTTACAACTCACCTCTTGGGATGAAGATGCCTGGGCCAGCAAGGTACGTGTTCTTAGTGGAGAAATAAGCAAAATCCCCAACTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS TCA 72 bp CCAATGGAAGTCATACAACAAAATCCCTTCTTTAGTTaGCTACCAGCCTTCTGGCTGGCCCTGGAGACATTG +
Preference number: 6 (lower is better)
Translates to: PMEVIQQNPFFS*LPAFWLALETL
Trigger: CAATGTCTCCAGGGCCAGCCAGAAGGCTGGTAGTCAACTAAAGAAGGGATTTTGTTGTATGACTTCCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS GCA 72 bp GGTGAGTACCAGGTCTATTTCACTTGTATCCCCAAGTaGCTAATCCTAGCCCTGAAAACTCAACTGACTACA +
Preference number: 6 (lower is better)
Translates to: GEYQVYFTCIPK*LILALKTQLTT
Trigger: TGTAGTCAGTTGAGTTTTCAGGGCTAGGATTAGGCACTTGGGGATACAAGTGAAATAGACCTGGTACTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS CCA 72 bp AGTCAAATTCACAGAGACAGAAAGAATGGTGGTTGCTaGGCCCTGTGCTGTGCATCTGTGTATTTATCTAGC +
Preference number: 6 (lower is better)
Translates to: SQIHRDRKNGGC*ALCCASVYLSS
Trigger: GCTAGATAAATACACAGATGCACAGCACAGGGCCCAGCAACCACCATTCTTTCTGTCTCTGTGAATTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS CCA 72 bp CTTCTTCTGAAGCATCCAACAGAGATTTGGTATCAATaGCTTCGTCCACCAGCCCTGTTAGGAAAACAGAAA +
Preference number: 6 (lower is better)
Translates to: LLLKHPTEIWYQ*LRPPALLGKQK
Trigger: TTTCTGTTTTCCTAACAGGGCTGGTGGACGAAGCCATTGATACCAAATCTCTGTTGGATGCTTCAGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472585.1
CDS CCA 72 bp AGAATTACAGGCATATCTGTATCTTACTTAGTCAGCTaGGAAGAACCACCCATATACAAGGCAGAGCTCCCA +
Preference number: 6 (lower is better)
Translates to: RITGISVSYLVS*EEPPIYKAELP
Trigger: TGGGAGCTCTGCCTTGTATATGGGTGGTTCTTCCCAGCTGACTAAGTAAGATACAGATATGCCTGTAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS CCA 72 bp GATCCCGGAGAACATACCGTTCTACTGAGCACCCAATaGAAGTCATACAACAAAATCCCTTCTTTAGTTGAC +
Preference number: 6 (lower is better)
Translates to: DPGEHTVLLSTQ*KSYNKIPSLVD
Trigger: GTCAACTAAAGAAGGGATTTTGTTGTATGACTTCCATTGGGTGCTCAGTAGAACGGTATGTTCTCCGGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS CAA 72 bp AACAAACTGTCCAGTATCTTGGCTCATCATTCCCTCTaGTATTTCAGGCTTACATCTGGGATCAGCGGACTT +
Preference number: 6 (lower is better)
Translates to: NKLSSILAHHSL*YFRLTSGISGL
Trigger: AAGTCCGCTGATCCCAGATGTAAGCCTGAAATACAAGAGGGAATGATGAGCCAAGATACTGGACAGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461383.1
CDS TCA 72 bp ATTACCTTACAGATCCCGGAGAACATACCGTTCTACTaGGCACCCAATGGAAGTCATACAACAAAATCCCTT +
Preference number: 6 (lower is better)
Translates to: ITLQIPENIPFY*APNGSHTTKSL
Trigger: AAGGGATTTTGTTGTATGACTTCCATTGGGTGCTCAGTAGAACGGTATGTTCTCCGGGATCTGTAAGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS TCA 72 bp AAAGAGAATAAGCGAAGAGCTTGGGTTAGGGGAACATaGGGTCATGGAGAACTACAGCTAATTCAGTTTGGA +
Preference number: 6 (lower is better)
Translates to: KENKRRAWVRGT*GHGELQLIQFG
Trigger: TCCAAACTGAATTAGCTGTAGTTCTCCATGACCTCATGTTCCCCTAACCCAAGCTCTTCGCTTATTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS CAA 72 bp TCTTGTATTTCAGGCTTACATCTGGGATCAGCGGACTaGTCTGAAGTACATTCTTTAGGATTTCCTCTAGTA +
Preference number: 6 (lower is better)
Translates to: SCISGLHLGSAD*SEVHSLGFPLV
Trigger: TACTAGAGGAAATCCTAAAGAATGTACTTCAGACAAGTCCGCTGATCCCAGATGTAAGCCTGAAATACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461383.1
CDS CAA 90 bp ATACATCAACACTTATCTACATTTACCAACAAACTGTCCAGTATCTaGGCTCATCATTCCCTCTTGTATTTCAGGCTTACATCTGGGATC +
Preference number: 6 (lower is better)
Translates to: IHQHLSTFTNKLSSI*AHHSLLYFRLTSGI
Trigger: GATCCCAGATGTAAGCCTGAAATACAAGAGGGAATGATGAGCCAAGATACTGGACAGTTTGTTGGTAAATGTAGATAAGTGTTGATGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461383.1
CDS TCA 72 bp TATTTCAGGCTTACATCTGGGATCAGCGGACTTGTCTaGAGTACATTCTTTAGGATTTCCTCTAGTAAAAGT +
Preference number: 6 (lower is better)
Translates to: YFRLTSGISGLV*STFFRISSSKS
Trigger: ACTTTTACTAGAGGAAATCCTAAAGAATGTACTTCAGACAAGTCCGCTGATCCCAGATGTAAGCCTGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461383.1
CDS CAA 72 bp CACTTATCTACATTTACCAACAAACTGTCCAGTATCTaGGCTCATCATTCCCTCTTGTATTTCAGGCTTACA +
Preference number: 6 (lower is better)
Translates to: HLSTFTNKLSSI*AHHSLLYFRLT
Trigger: TGTAAGCCTGAAATACAAGAGGGAATGATGAGCCAAGATACTGGACAGTTTGTTGGTAAATGTAGATAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461383.1
CDS TCA 72 bp AAAGGTCTGATTAATTCACTGCTTACAGTGGAGCAATaGAAGATGCGTAATGCTACAAAACTGAAAAAGAGC +
Preference number: 6 (lower is better)
Translates to: KGLINSLLTVEQ*KMRNATKLKKS
Trigger: GCTCTTTTTCAGTTTTGTAGCATTACGCATCTTTCATTGCTCCACTGTAAGCAGTGAATTAATCAGACCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623461.3
CDS CCA 72 bp ACTTATCTACATTTACCAACAAACTGTCCAGTATCTTaGCTCATCATTCCCTCTTGTATTTCAGGCTTACAT +
Preference number: 6 (lower is better)
Translates to: TYLHLPTNCPVS*LIIPSCISGLH
Trigger: ATGTAAGCCTGAAATACAAGAGGGAATGATGAGCCAAGATACTGGACAGTTTGTTGGTAAATGTAGATAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461383.1
CDS TCA 72 bp CACTTTCCAGAAGAATACTGCACCAATGGGGAGGCATaGAACAAGTATGGTAAGACAAAGTTAATTATTTAT +
Preference number: 6 (lower is better)
Translates to: HFPEEYCTNGEA*NKYGKTKLIIY
Trigger: ATAAATAATTAACTTTGTCTTACCATACTTGTTTCATGCCTCCCCATTGGTGCAGTATTCTTCTGGAAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623461.3