Pregenerated sensors for VARS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000096171, ENSG00000204394, ENSG00000224264, ENSG00000226589Ensembl transcript IDs: ENST00000211402.10, ENST00000375663.8, ENST00000417430.1, ENST00000419375.1, ENST00000420919.1, ENST00000422694.6, ENST00000424974.1, ENST00000424984.1, ENST00000425144.5, ENST00000425864.1, ENST00000428445.1, ENST00000428505.1, ENST00000428796.1, ENST00000435299.1, ENST00000435657.6, ENST00000440048.1, ENST00000445152.1, ENST00000446350.1, ENST00000455956.1, ENST00000457796.6, ENST00000459667.1, ENST00000459794.1, ENST00000459886.1, ENST00000460877.1, ENST00000461227.1, ENST00000461265.5, ENST00000461328.1, ENST00000461732.5, ENST00000461874.1, ENST00000462575.1, ENST00000462946.5, ENST00000463184.1, ENST00000463326.1, ENST00000465840.1, ENST00000466721.1, ENST00000466837.1, ENST00000467893.5, ENST00000469502.1, ENST00000469542.5, ENST00000470081.1, ENST00000470738.1, ENST00000470953.1, ENST00000471313.1, ENST00000472262.1, ENST00000473229.1, ENST00000473547.1, ENST00000473650.1, ENST00000473729.5, ENST00000474299.5, ENST00000474643.5, ENST00000475799.1, ENST00000476714.1, ENST00000476915.1, ENST00000478549.1, ENST00000478826.5, ENST00000478838.1, ENST00000479051.1, ENST00000479323.1, ENST00000481159.1, ENST00000481216.1, ENST00000482057.5, ENST00000482263.1, ENST00000482300.1, ENST00000482996.5, ENST00000483266.1, ENST00000483275.1, ENST00000485047.1, ENST00000486768.1, ENST00000486789.1, ENST00000487025.1, ENST00000487524.5, ENST00000488037.1, ENST00000488448.5, ENST00000489089.1, ENST00000489382.5, ENST00000489979.1, ENST00000490548.1, ENST00000491232.5, ENST00000491744.1, ENST00000491745.1, ENST00000494362.5, ENST00000495010.5, ENST00000495637.5, ENST00000495738.1, ENST00000496018.5, ENST00000497172.1
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACAGGGAGCGTTTCCGGGCCTGCGGGTCCTGGCGGGGGCGGCCGTaGCCCGCCTGCGAGTGCGCGCCCGCCGTGTCCGACACTGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: DRERFRACGSWRGRP*PACECAPAVSDTAP Trigger: CGGGGCAGTGTCGGACACGGCGGGCGCGCACTCGCAGGCGGGGCACGGCCGCCCCCGCCAGGACCCGCAGGCCCGGAAACGCTCCCTGTC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000211402.10 ENST00000422694.6 ENST00000424974.1 ENST00000435657.6 ENST00000457796.6 |
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| CDS CCA 90 bp | GGGCCTCAGGCAGGATGCGGAGGTCACCCCGAGTCACAGCGGCGCTaGCAGCCTGGGCCATCTCCCCGCAGCGAACGTACCACTGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: GPQAGCGGHPESQRR*QPGPSPRSERTTAA Trigger: GGCCGCAGTGGTACGTTCGCTGCGGGGAGATGGCCCAGGCTGCCAGCGCCGCTGTGACTCGGGGTGACCTCCGCATCCTGCCTGAGGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 24 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000459886.1 ENST00000461265.5 ENST00000461874.1 ENST00000462575.1 ENST00000470738.1 ENST00000473650.1 ENST00000473729.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000483266.1 ENST00000483275.1 ENST00000486789.1 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 ENST00000497172.1 |
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| CDS CCA 90 bp | GGCAGGATGCGGAGGTCACCCCGAGTCACAGCGGCGCTGGCAGCCTaGGCCATCTCCCCGCAGCGAACGTACCACTGCGGCCGCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GRMRRSPRVTAALAA*AISPQRTYHCGRSR Trigger: TCTGCTGCGGCCGCAGTGGTACGTTCGCTGCGGGGAGATGGCCCAGGCTGCCAGCGCCGCTGTGACTCGGGGTGACCTCCGCATCCTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 24 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000459886.1 ENST00000461265.5 ENST00000461874.1 ENST00000462575.1 ENST00000470738.1 ENST00000473650.1 ENST00000473729.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000483266.1 ENST00000483275.1 ENST00000486789.1 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 ENST00000497172.1 |
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| CDS CCA 90 bp | CCAGGGCCTGCACGTAGCCCGACACCGCCGATGCCAGGGCGCCCGTaGCCTCATCCGCCACTTCCAGGAAACAGTCAGGCCGGATCCGGG | + |
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Preference number: 5 (lower is better) Translates to: PGPARSPTPPMPGRP*PHPPLPGNSQAGSG Trigger: CCCGGATCCGGCCTGACTGTTTCCTGGAAGTGGCGGATGAGGCCACGGGCGCCCTGGCATCGGCGGTGTCGGGCTACGTGCAGGCCCTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS CCA 90 bp | GGCGTTCCCGCAGACGCTGGGCCTGCCGCTGGGCCTCAACTCGCTTaGCTTGCAGCTTGCCCAGCTCCCGTGCAGGGTCCACCAGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: GVPADAGPAAGPQLA*LAACPAPVQGPPAP Trigger: AGGGGCTGGTGGACCCTGCACGGGAGCTGGGCAAGCTGCAAGCCAAGCGAGTTGAGGCCCAGCGGCAGGCCCAGCGTCTGCGGGAACGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS GCA 90 bp | GCGGCGCTGGCAGCCTGGGCCATCTCCCCGCAGCGAACGTACCACTaGGGCCGCAGCAGAGGCTCTACCACGTCCTTCGACCGGTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: AALAAWAISPQRTYH*GRSRGSTTSFDRLQ Trigger: TTGCAACCGGTCGAAGGACGTGGTAGAGCCTCTGCTGCGGCCGCAGTGGTACGTTCGCTGCGGGGAGATGGCCCAGGCTGCCAGCGCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000473729.5 ENST00000474643.5 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS GCA 90 bp | GACGCTGGGCCTGCCGCTGGGCCTCAACTCGCTTGGCTTGCAGCTTaGCCAGCTCCCGTGCAGGGTCCACCAGCCCCTGAAGCTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: DAGPAAGPQLAWLAA*PAPVQGPPAPEAAG Trigger: ACCTGCAGCTTCAGGGGCTGGTGGACCCTGCACGGGAGCTGGGCAAGCTGCAAGCCAAGCGAGTTGAGGCCCAGCGGCAGGCCCAGCGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS CCA 90 bp | AGGTGGATGGAGCAGCGATCAGAAGCCAGAGCCACAGCGCAACCCTaGGGGGCGGGAGCCCCCAGGGCCAGAACAGCCACCACACCTGCG | + |
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Preference number: 5 (lower is better) Translates to: RWMEQRSEARATAQP*GAGAPRARTATTPA Trigger: CGCAGGTGTGGTGGCTGTTCTGGCCCTGGGGGCTCCCGCCCCCCAGGGTTGCGCTGTGGCTCTGGCTTCTGATCGCTGCTCCATCCACCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS TCA 90 bp | TCGGGGAGGAGAAATCAGGGAGGGCCTGATGGAGCCTGGCCCGAGTaGGCCCTGCTCAGCCCTCGGCAAGCCCCTCCCACACTGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: SGRRNQGGPDGAWPE*ALLSPRQAPPTLRT Trigger: GGTCCTCAGTGTGGGAGGGGCTTGCCGAGGGCTGAGCAGGGCTCACTCGGGCCAGGCTCCATCAGGCCCTCCCTGATTTCTCCTCCCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000459886.1 ENST00000461874.1 ENST00000462575.1 ENST00000473650.1 ENST00000486789.1 ENST00000497172.1 |
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| CDS GCA 90 bp | TGTCCATCCAGGCATGCCATGTGCGCTGATGGGCCTCAGGCAGGATaGGGAGGTCACCCCGAGTCACAGCGGCGCTGGCAGCCTGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: CPSRHAMCADGPQAG*GGHPESQRRWQPGP Trigger: TGGCCCAGGCTGCCAGCGCCGCTGTGACTCGGGGTGACCTCCGCATCCTGCCTGAGGCCCATCAGCGCACATGGCATGCCTGGATGGACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000459886.1 ENST00000461265.5 ENST00000461874.1 ENST00000462575.1 ENST00000470738.1 ENST00000473650.1 ENST00000473729.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000483266.1 ENST00000483275.1 ENST00000486789.1 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 ENST00000497172.1 |
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| CDS GCA 90 bp | CCGCTGGGCCTCAACTCGCTTGGCTTGCAGCTTGCCCAGCTCCCGTaGAGGGTCCACCAGCCCCTGAAGCTGCAGGTGGATGGAGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: PLGLNSLGLQLAQLP*RVHQPLKLQVDGAA Trigger: CGCTGCTCCATCCACCTGCAGCTTCAGGGGCTGGTGGACCCTGCACGGGAGCTGGGCAAGCTGCAAGCCAAGCGAGTTGAGGCCCAGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS TCA 90 bp | GGGCAGGTGGGTCTAGGACGTATCGGAAAGGCAGCAGCAAGGCTGTaGCAGCCGCCAGGTCAGCCAGAGTGGGGGCCTCCCCGGCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: GQVGLGRIGKAAARL*QPPGQPEWGPPRPS Trigger: ACTTGGCCGGGGAGGCCCCCACTCTGGCTGACCTGGCGGCTGTCACAGCCTTGCTGCTGCCTTTCCGATACGTCCTAGACCCACCTGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000424974.1 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS CCA 90 bp | TGGGGGAGAGGAAGGGAGGGCTCAGTGCCGTGGCTGGGAGCACTCTaGGAAGGAGACGTGCTGGCAGAGAGGGATCGGGATCTCCGTCAC | + |
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Preference number: 5 (lower is better) Translates to: WGRGREGSVPWLGAL*EGDVLAERDRDLRH Trigger: GTGACGGAGATCCCGATCCCTCTCTGCCAGCACGTCTCCTTCCCAGAGTGCTCCCAGCCACGGCACTGAGCCCTCCCTTCCTCTCCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000460877.1 ENST00000465840.1 ENST00000467893.5 ENST00000470081.1 ENST00000473547.1 ENST00000489979.1 ENST00000495738.1 |
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| CDS CCA 90 bp | CCACTGACATCTGGGGGAGAGGAAGGGAGGGCTCAGTGCCGTGGCTaGGAGCACTCTGGGAAGGAGACGTGCTGGCAGAGAGGGATCGGG | + |
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Preference number: 5 (lower is better) Translates to: PLTSGGEEGRAQCRG*EHSGKETCWQRGIG Trigger: CCCGATCCCTCTCTGCCAGCACGTCTCCTTCCCAGAGTGCTCCCAGCCACGGCACTGAGCCCTCCCTTCCTCTCCCCCAGATGTCAGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000460877.1 ENST00000465840.1 ENST00000467893.5 ENST00000470081.1 ENST00000473547.1 ENST00000489979.1 ENST00000495738.1 |
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| CDS CCA 90 bp | GGGGCCACTGACATCTGGGGGAGAGGAAGGGAGGGCTCAGTGCCGTaGCTGGGAGCACTCTGGGAAGGAGACGTGCTGGCAGAGAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: GATDIWGRGREGSVP*LGALWEGDVLAERD Trigger: ATCCCTCTCTGCCAGCACGTCTCCTTCCCAGAGTGCTCCCAGCCACGGCACTGAGCCCTCCCTTCCTCTCCCCCAGATGTCAGTGGCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000460877.1 ENST00000465840.1 ENST00000467893.5 ENST00000470081.1 ENST00000473547.1 ENST00000489979.1 ENST00000495738.1 |
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| CDS TCA 90 bp | GTTGGAGCTTGGCTTCATCTGCCTCCTGGACTTCGAGCGGCACCTTaGCAGGATAGCCCGAGGCAGCACGGCGTTCCCGCAGACGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: VGAWLHLPPGLRAAP*QDSPRQHGVPADAG Trigger: CCCAGCGTCTGCGGGAACGCCGTGCTGCCTCGGGCTATCCTGTCAAGGTGCCGCTCGAAGTCCAGGAGGCAGATGAAGCCAAGCTCCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS CCA 90 bp | ACACAGAGGCTAGGGGGAGCTTGCGGCATCCTCCGGGGCAGCCTCTaGAACAGCTCCTCCGTCACGAAGGGCATGAAGGGTGAGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TQRLGGACGILRGSL*NSSSVTKGMKGESS Trigger: GCTGCTCTCACCCTTCATGCCCTTCGTGACGGAGGAGCTGTTCCAGAGGCTGCCCCGGAGGATGCCGCAAGCTCCCCCTAGCCTCTGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS CCA 90 bp | AGCGCCACCAGCACCGCTTTCCTGGCCTCAAACCTGGGCAGGCCCTaGGTAGGAATGAGGCCTCATCATGGCGATGCCCAGCCATCCCTC | + |
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Preference number: 5 (lower is better) Translates to: SATSTAFLASNLGRP*VGMRPHHGDAQPSL Trigger: GAGGGATGGCTGGGCATCGCCATGATGAGGCCTCATTCCTACCCAGGGCCTGCCCAGGTTTGAGGCCAGGAAAGCGGTGCTGGTGGCGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000461265.5 ENST00000461328.1 ENST00000463326.1 ENST00000473729.5 ENST00000474643.5 ENST00000476915.1 ENST00000486768.1 ENST00000488448.5 ENST00000489089.1 ENST00000490548.1 ENST00000494362.5 ENST00000495637.5 |
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| CDS CCA 90 bp | CTCCCGTCCCAGGCCCCCACCCTCACTTGCAAAGTGGCACCACCATaGGGTTGTCCTCAATGCCACGGAACAGTCCCCGCTCCTTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: LPSQAPTLTCKVAPP*GCPQCHGTVPAPSA Trigger: CGCTGAAGGAGCGGGGACTGTTCCGTGGCATTGAGGACAACCCCATGGTGGTGCCACTTTGCAAGTGAGGGTGGGGGCCTGGGACGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000461328.1 ENST00000463326.1 ENST00000476915.1 ENST00000486768.1 ENST00000489089.1 ENST00000490548.1 |
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| CDS TCA 90 bp | ATGCACCACTCCCGGATGTTGTCCATCCAGGCATGCCATGTGCGCTaGTGGGCCTCAGGCAGGATGCGGAGGTCACCCCGAGTCACAGCG | + |
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Preference number: 5 (lower is better) Translates to: MHHSRMLSIQACHVR*WASGRMRRSPRVTA Trigger: CGCTGTGACTCGGGGTGACCTCCGCATCCTGCCTGAGGCCCATCAGCGCACATGGCATGCCTGGATGGACAACATCCGGGAGTGGTGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000470738.1 ENST00000473729.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000483266.1 ENST00000483275.1 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS TCA 90 bp | GACCCTACACACCGGATGTTGTCCATCCAGGCATGCCATGTGCGCTaGTGGGCCTCAGGCAGGATGCGGAGGTCACCCCGAGTCACAGCG | + |
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Preference number: 5 (lower is better) Translates to: DPTHRMLSIQACHVR*WASGRMRRSPRVTA Trigger: CGCTGTGACTCGGGGTGACCTCCGCATCCTGCCTGAGGCCCATCAGCGCACATGGCATGCCTGGATGGACAACATCCGGTGTGTAGGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000459886.1 ENST00000461874.1 ENST00000462575.1 ENST00000473650.1 ENST00000486789.1 ENST00000497172.1 |
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| CDS TCA 90 bp | AATGAGGCCTCATCATGGCGATGCCCAGCCATCCCTCCATCTCCCTaGCCCGGGCACTCTTGCCTCAGGCAGCCTCACCAGGAAAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: NEASSWRCPAIPPSP*PGHSCLRQPHQERR Trigger: CCGCCTTTCCTGGTGAGGCTGCCTGAGGCAAGAGTGCCCGGGTCAGGGAGATGGAGGGATGGCTGGGCATCGCCATGATGAGGCCTCATT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000461265.5 ENST00000461328.1 ENST00000463326.1 ENST00000473729.5 ENST00000474643.5 ENST00000476915.1 ENST00000486768.1 ENST00000488448.5 ENST00000489089.1 ENST00000490548.1 ENST00000494362.5 ENST00000495637.5 |
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| CDS CCA 90 bp | GGTGAGAGCAGCCGCAGGCCAACGTCCAGGCAAGTGTACAGGGTCTaGCGGGCACACTCAGCTGCCACCTGGTCCACCCCATTCAGTACA | + |
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Preference number: 5 (lower is better) Translates to: GESSRRPTSRQVYRV*RAHSAATWSTPFST Trigger: TGTACTGAATGGGGTGGACCAGGTGGCAGCTGAGTGTGCCCGCCAGACCCTGTACACTTGCCTGGACGTTGGCCTGCGGCTGCTCTCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS CCA 90 bp | GAAGATGAAGCCCTGGGCACAGGAATCACTGAGCAGGGCCCAGGCTaGATTTCAACCCCACACCAGCCCCCAGGTCAGGCCTGCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: EDEALGTGITEQGPG*ISTPHQPPGQACPQ Trigger: CTGTGGGCAGGCCTGACCTGGGGGCTGGTGTGGGGTTGAAATCCAGCCTGGGCCCTGCTCAGTGATTCCTGTGCCCAGGGCTTCATCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478549.1 |
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| CDS TCA 90 bp | AGGGCTCACGGCTGGAGGTCTAGCCTTGAGCCCTCGCTGTGCCTGTaGGGACTGGGAAGGGGATGGGTTGGCTTAGGTCTCAAGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: RAHGWRSSLEPSLCL*GLGRGWVGLGLKAN Trigger: GTTGGCCTTGAGACCTAAGCCAACCCATCCCCTTCCCAGTCCTCACAGGCACAGCGAGGGCTCAAGGCTAGACCTCCAGCCGTGAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS GCA 90 bp | CCTTCGACCGGTTGCAAAGTGGCACCACCATGGGGTTGTCCTCAATaGCACGGAACAGTCCCCGCTCCTTCAGCGCCACCAGCACCGCTT | + |
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Preference number: 5 (lower is better) Translates to: PSTGCKVAPPWGCPQ*HGTVPAPSAPPAPL Trigger: AAGCGGTGCTGGTGGCGCTGAAGGAGCGGGGACTGTTCCGTGGCATTGAGGACAACCCCATGGTGGTGCCACTTTGCAACCGGTCGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000473729.5 ENST00000474643.5 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS GCA 90 bp | CTGAGGACCCTACACACCGGATGTTGTCCATCCAGGCATGCCATGTaGGCTGATGGGCCTCAGGCAGGATGCGGAGGTCACCCCGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: LRTLHTGCCPSRHAM*ADGPQAGCGGHPES Trigger: TGACTCGGGGTGACCTCCGCATCCTGCCTGAGGCCCATCAGCGCACATGGCATGCCTGGATGGACAACATCCGGTGTGTAGGGTCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000459886.1 ENST00000461874.1 ENST00000462575.1 ENST00000473650.1 ENST00000486789.1 ENST00000497172.1 |
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| CDS GCA 90 bp | GGGAGGGCTCAGTGCCGTGGCTGGGAGCACTCTGGGAAGGAGACGTaGTGGCAGAGAGGGATCGGGATCTCCGTCACTCACATCATAGGA | + |
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Preference number: 5 (lower is better) Translates to: GRAQCRGWEHSGKET*WQRGIGISVTHIIG Trigger: TCCTATGATGTGAGTGACGGAGATCCCGATCCCTCTCTGCCAGCACGTCTCCTTCCCAGAGTGCTCCCAGCCACGGCACTGAGCCCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000460877.1 ENST00000465840.1 ENST00000467893.5 ENST00000470081.1 ENST00000473547.1 ENST00000489979.1 ENST00000495738.1 |
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| CDS CCA 90 bp | CGCCATAGCTTCTTCTCCACCACCACCTGGGTGGCAATACCTGCATaGTCACAGCCAGGGTTCCACAGGGTGGTCTCCCCACGCATGCGG | + |
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Preference number: 5 (lower is better) Translates to: RHSFFSTTTWVAIPA*SQPGFHRVVSPRMR Trigger: CCGCATGCGTGGGGAGACCACCCTGTGGAACCCTGGCTGTGACCATGCAGGTATTGCCACCCAGGTGGTGGTGGAGAAGAAGCTATGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000460877.1 ENST00000461732.5 ENST00000465840.1 ENST00000470081.1 ENST00000473547.1 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000489979.1 ENST00000495010.5 ENST00000495738.1 ENST00000496018.5 |
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| CDS GCA 90 bp | TGGAAATGCACCACTCCCGGATGTTGTCCATCCAGGCATGCCATGTaGGCTGATGGGCCTCAGGCAGGATGCGGAGGTCACCCCGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: WKCTTPGCCPSRHAM*ADGPQAGCGGHPES Trigger: TGACTCGGGGTGACCTCCGCATCCTGCCTGAGGCCCATCAGCGCACATGGCATGCCTGGATGGACAACATCCGGGAGTGGTGCATTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000470738.1 ENST00000473729.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000483266.1 ENST00000483275.1 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS CCA 90 bp | CGGCTCAGTCCCTGCTCACGCCATAGCTTCTTCTCCACCACCACCTaGGTGGCAATACCTGCATGGTCACAGCCAGGGTTCCACAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: RLSPCSRHSFFSTTT*VAIPAWSQPGFHRV Trigger: CACCCTGTGGAACCCTGGCTGTGACCATGCAGGTATTGCCACCCAGGTGGTGGTGGAGAAGAAGCTATGGCGTGAGCAGGGACTGAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000460877.1 ENST00000461732.5 ENST00000465840.1 ENST00000470081.1 ENST00000473547.1 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000489979.1 ENST00000495010.5 ENST00000495738.1 ENST00000496018.5 |
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| CDS CCA 90 bp | TCCTTCCACTTCCAGACTTCCTGTAGAAAGGCCTCGCGGCCCAGCTaGTGCCGGCTCAGTCCCTGCTCACGCCATAGCTTCTTCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: SFHFQTSCRKASRPS*CRLSPCSRHSFFST Trigger: GGTGGAGAAGAAGCTATGGCGTGAGCAGGGACTGAGCCGGCACCAGCTGGGCCGCGAGGCCTTTCTACAGGAAGTCTGGAAGTGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000460877.1 ENST00000461732.5 ENST00000465840.1 ENST00000470081.1 ENST00000473547.1 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000489979.1 ENST00000495010.5 ENST00000495738.1 ENST00000496018.5 |
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| CDS CCA 90 bp | AGGGCTCAGTGCCGTGGCTGGGAGCACTCTGGGAAGGAGACGTGCTaGCAGAGAGGGATCGGGATCTCCGTCACTCACATCATAGGACAG | + |
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Preference number: 5 (lower is better) Translates to: RAQCRGWEHSGKETC*QRGIGISVTHIIGQ Trigger: CTGTCCTATGATGTGAGTGACGGAGATCCCGATCCCTCTCTGCCAGCACGTCTCCTTCCCAGAGTGCTCCCAGCCACGGCACTGAGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000460877.1 ENST00000465840.1 ENST00000467893.5 ENST00000470081.1 ENST00000473547.1 ENST00000489979.1 ENST00000495738.1 |
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| CDS TCA 90 bp | AAGAGAGACAGGGGAAGACTGCGGGATCGAGGTGGGTCCTATGTTTaGGTAGAGAGGGGACCCTCACGGGAGCTCCTTCGCCGCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: KRDRGRLRDRGGSYV*VERGPSRELLRRRH Trigger: GTGTCTGCGGCGAAGGAGCTCCCGTGAGGGTCCCCTCTCTACTCAAACATAGGACCCACCTCGATCCCGCAGTCTTCCCCTGTCTCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000417430.1 ENST00000419375.1 ENST00000424984.1 ENST00000425864.1 ENST00000428505.1 ENST00000440048.1 |
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| CDS GCA 90 bp | TTGCTGGAGACTGATCTTGTCAGGGGACACTCCGAACTCCTTGGCTaGCTTCTCCCGGGCCTCCGCCTCATTGCGTCCACTCACCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LLETDLVRGHSELLG*LLPGLRLIASTHPV Trigger: TACTGGGTGAGTGGACGCAATGAGGCGGAGGCCCGGGAGAAGGCAGCCAAGGAGTTCGGAGTGTCCCCTGACAAGATCAGTCTCCAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 36 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000420919.1 ENST00000422694.6 ENST00000425144.5 ENST00000428445.1 ENST00000428796.1 ENST00000435299.1 ENST00000435657.6 ENST00000445152.1 ENST00000446350.1 ENST00000457796.6 ENST00000459886.1 ENST00000461265.5 ENST00000461874.1 ENST00000462575.1 ENST00000462946.5 ENST00000469542.5 ENST00000470738.1 ENST00000473650.1 ENST00000473729.5 ENST00000474299.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000482996.5 ENST00000483266.1 ENST00000483275.1 ENST00000486789.1 ENST00000487524.5 ENST00000488448.5 ENST00000491232.5 ENST00000494362.5 ENST00000495637.5 ENST00000497172.1 |
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| CDS GCA 90 bp | GCCAACGTCCAGGCAAGTGTACAGGGTCTGGCGGGCACACTCAGCTaGCACCTGGTCCACCCCATTCAGTACAGGTTTCAGGCACTCCAA | + |
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Preference number: 5 (lower is better) Translates to: ANVQASVQGLAGTLS*HLVHPIQYRFQALQ Trigger: TTGGAGTGCCTGAAACCTGTACTGAATGGGGTGGACCAGGTGGCAGCTGAGTGTGCCCGCCAGACCCTGTACACTTGCCTGGACGTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS GCA 90 bp | GCCAACGTCCAGGCAAGTGTACAGGGTCTGGCGGGCACACTCAGCTaGCACCTGGTCCACCCCATTCAGTACAGGTTTCAGGCACTCCTA | + |
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Preference number: 5 (lower is better) Translates to: ANVQASVQGLAGTLS*HLVHPIQYRFQALL Trigger: TAGGAGTGCCTGAAACCTGTACTGAATGGGGTGGACCAGGTGGCAGCTGAGTGTGCCCGCCAGACCCTGTACACTTGCCTGGACGTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS CCA 90 bp | CCCATAGCGAGCGGCTATGAGGGCTCGGAGGCTGGGGAAGGCATCTaGGTGAGGGGAGACGTAGAGGGTGGACATAGTTATGAGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PIASGYEGSEAGEGI*VRGDVEGGHSYEKV Trigger: GACCTTCTCATAACTATGTCCACCCTCTACGTCTCCCCTCACCCAGATGCCTTCCCCAGCCTCCGAGCCCTCATAGCCGCTCGCTATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000417430.1 ENST00000419375.1 ENST00000422694.6 ENST00000424974.1 ENST00000424984.1 ENST00000425864.1 ENST00000428505.1 ENST00000435657.6 ENST00000440048.1 ENST00000457796.6 |
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| CDS TCA 90 bp | CCACTTCTCCTAGCACGGCTCGGAATTCTGGCTGCCGGACACACGTaGCAAACCAGCGAGTCACATTATTCCAGATCCGGCGGGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLLARLGILAAGHT*QTSESHYSRSGGQV Trigger: CACCTGCCCGCCGGATCTGGAATAATGTGACTCGCTGGTTTGTCACGTGTGTCCGGCAGCCAGAATTCCGAGCCGTGCTAGGAGAAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000424974.1 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461732.5 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000491744.1 ENST00000495010.5 ENST00000496018.5 |
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| CDS CCA 90 bp | TCAGTCCCTGCTCACGCCATAGCTTCTTCTCCACCACCACCTGGGTaGCAATACCTGCATGGTCACAGCCAGGGTTCCACAGGGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVPAHAIASSPPPPG*QYLHGHSQGSTGWS Trigger: AGACCACCCTGTGGAACCCTGGCTGTGACCATGCAGGTATTGCCACCCAGGTGGTGGTGGAGAAGAAGCTATGGCGTGAGCAGGGACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000460877.1 ENST00000461732.5 ENST00000465840.1 ENST00000470081.1 ENST00000473547.1 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000489979.1 ENST00000495010.5 ENST00000495738.1 ENST00000496018.5 |
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| CDS GCA 90 bp | CTTTCTGCCCTTCTTTGGCCTTCTCCACCTCGCTGGGATCCAGGTTaGTGTTCAGCAGCTGGTTGTGGAGGCCCTGCAGGGAGATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSALLWPSPPRWDPG*CSAAGCGGPAGRFH Trigger: ATGGAATCTCCCTGCAGGGCCTCCACAACCAGCTGCTGAACAGCAACCTGGATCCCAGCGAGGTGGAGAAGGCCAAAGAAGGGCAGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000420919.1 ENST00000422694.6 ENST00000425144.5 ENST00000428445.1 ENST00000428796.1 ENST00000435299.1 ENST00000435657.6 ENST00000445152.1 ENST00000446350.1 ENST00000457796.6 ENST00000462946.5 ENST00000469542.5 ENST00000474299.5 ENST00000482996.5 ENST00000487524.5 ENST00000491232.5 |
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| CDS TCA 90 bp | CAGGTCCCACTGAGTGTCCCCAAGAGCTCGTTGAGCGCCTTTATGTaGATCAGAAGCACTCCTTCCTCTGGGAAGATGAAGCCCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: QVPLSVPKSSLSAFM*IRSTPSSGKMKPWA Trigger: TGCCCAGGGCTTCATCTTCCCAGAGGAAGGAGTGCTTCTGATTCACATAAAGGCGCTCAACGAGCTCTTGGGGACACTCAGTGGGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000459667.1 ENST00000471313.1 ENST00000476714.1 ENST00000478549.1 ENST00000485047.1 ENST00000487025.1 |
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| CDS CCA 90 bp | AAACCTAAGGAGAAAGAGAGACAGGGGAAGACTGCGGGATCGAGGTaGGTCCTATGTTTGAGTAGAGAGGGGACCCTCACGGGAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: KPKEKERQGKTAGSR*VLCLSREGTLTGAP Trigger: AGGAGCTCCCGTGAGGGTCCCCTCTCTACTCAAACATAGGACCCACCTCGATCCCGCAGTCTTCCCCTGTCTCTCTTTCTCCTTAGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000417430.1 ENST00000419375.1 ENST00000424984.1 ENST00000425864.1 ENST00000428505.1 ENST00000440048.1 |
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| CDS CCA 90 bp | GAGCTCGTTGAGCGCCTTTATGTGAATCAGAAGCACTCCTTCCTCTaGGAAGATGAAGCCCTGGGCACAGGAATCACTGAGCAGGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: ELVERLYVNQKHSFL*EDEALGTGITEQGP Trigger: TGGGCCCTGCTCAGTGATTCCTGTGCCCAGGGCTTCATCTTCCCAGAGGAAGGAGTGCTTCTGATTCACATAAAGGCGCTCAACGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000459667.1 ENST00000471313.1 ENST00000476714.1 ENST00000478549.1 ENST00000485047.1 ENST00000487025.1 |
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| CDS CCA 90 bp | ACTGGTTTTCTCTGTGTCTGTGCAGTTTACTCCACTGCTTCTCTCTaGCGGAACCCAGGAGGCAGGGGACAAACAAGACTGGCCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: TGFLCVCAVYSTASL*RNPGGRGQTRLAFQ Trigger: CTGGAAGGCCAGTCTTGTTTGTCCCCTGCCTCCTGGGTTCCGCCAGAGAGAAGCAGTGGAGTAAACTGCACAGACACAGAGAAAACCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000469502.1 ENST00000470953.1 ENST00000472262.1 ENST00000473229.1 ENST00000488037.1 |
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| CDS CCA 90 bp | GTCCACAAATTCATCGAAGACAATGGGAAGGCTCCGAGACAGGAATaGGTGGATCACGTTCTTCCCCTTCAGGTGCTGGGGGCGGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: VHKFIEDNGKAPRQE*VDHVLPLQVLGAER Trigger: TCTTTCCGCCCCCAGCACCTGAAGGGGAAGAACGTGATCCACCCATTCCTGTCTCGGAGCCTTCCCATTGTCTTCGATGAATTTGTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000461265.5 ENST00000473729.5 ENST00000474643.5 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS TCA 90 bp | ATCACAGCATCTTCTGGAATAGGGCGATGGCCTCATCCACCTTCCTaGGCTCTGCTTCTGTCTGTTGGAGCTTGGCTTCATCTGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: ITASSGIGRWPHPPS*ALLLSVGAWLHLPP Trigger: AGGAGGCAGATGAAGCCAAGCTCCAACAGACAGAAGCAGAGCTCAGGAAGGTGGATGAGGCCATCGCCCTATTCCAGAAGATGCTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS TCA 90 bp | ATCACAGCATCTTCTGGAATAGGGCGATGGCCTCATCCACCTTCCTaGGCTCTGCTTCTGTCTGTTGGAGCTAAGCAGGAGAGCACAGTC | + |
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Preference number: 5 (lower is better) Translates to: ITASSGIGRWPHPPS*ALLLSVGAKQESTV Trigger: GACTGTGCTCTCCTGCTTAGCTCCAACAGACAGAAGCAGAGCTCAGGAAGGTGGATGAGGCCATCGCCCTATTCCAGAAGATGCTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000469502.1 ENST00000470953.1 ENST00000472262.1 ENST00000473229.1 ENST00000488037.1 |
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| CDS CCA 90 bp | ACAAATTCATCGAAGACAATGGGAAGGCTCCGAGACAGGAATGGGTaGATCACGTTCTTCCCCTTCAGGTGCTGGGGGCGGAAAGATACC | + |
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Preference number: 5 (lower is better) Translates to: TNSSKTMGRLRDRNG*ITFFPFRCWGRKDT Trigger: GGTATCTTTCCGCCCCCAGCACCTGAAGGGGAAGAACGTGATCCACCCATTCCTGTCTCGGAGCCTTCCCATTGTCTTCGATGAATTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000461265.5 ENST00000473729.5 ENST00000474643.5 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS GCA 90 bp | CCTGAGTATAGAACCACTTCTCCTAGCACGGCTCGGAATTCTGGCTaGCGGACACACGTGACAAACCAGCGAGTCACATTATTCCAGATC | + |
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Preference number: 5 (lower is better) Translates to: PEYRTTSPSTARNSG*RTHVTNQRVTLFQI Trigger: GATCTGGAATAATGTGACTCGCTGGTTTGTCACGTGTGTCCGGCAGCCAGAATTCCGAGCCGTGCTAGGAGAAGTGGTTCTATACTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000424974.1 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461732.5 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000491744.1 ENST00000495010.5 ENST00000496018.5 |
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| CDS CCA 90 bp | CAGCACCTGTGCCAAAGTCCATGTCCACAAATTCATCGAAGACAATaGGAAGGCTCCGAGACAGGAATGGGTGGATCACGTTCTTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: QHLCQSPCPQIHRRQ*EGSETGMGGSRSSP Trigger: AGGGGAAGAACGTGATCCACCCATTCCTGTCTCGGAGCCTTCCCATTGTCTTCGATGAATTTGTGGACATGGACTTTGGCACAGGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000461328.1 ENST00000463326.1 ENST00000473729.5 ENST00000474643.5 ENST00000476915.1 ENST00000486768.1 ENST00000488448.5 ENST00000489089.1 ENST00000490548.1 ENST00000494362.5 ENST00000495637.5 |
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| CDS CCA 90 bp | GTCCACAAATTCATCGAAGACAATGGGAAGGCTCCGAGACAGGAATaGGTGGATCACGTTCTTCCCCTTCAGGTGCTGGTATCTGGTATC | + |
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Preference number: 5 (lower is better) Translates to: VHKFIEDNGKAPRQE*VDHVLPLQVLVSGI Trigger: GATACCAGATACCAGCACCTGAAGGGGAAGAACGTGATCCACCCATTCCTGTCTCGGAGCCTTCCCATTGTCTTCGATGAATTTGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461328.1 ENST00000463326.1 ENST00000476915.1 ENST00000486768.1 ENST00000489089.1 ENST00000490548.1 |
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| CDS CCA 90 bp | TTAACCACGTCCACTCAAGGCTCTCTAGCTCTTGGCCTCCATGACTaGTTTTCTCTGTGTCTGTGCAGTTTACTCCACTGCTTCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LTTSTQGSLALGLHD*FSLCLCSLLHCFSL Trigger: CAGAGAGAAGCAGTGGAGTAAACTGCACAGACACAGAGAAAACCAGTCATGGAGGCCAAGAGCTAGAGAGCCTTGAGTGGACGTGGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000469502.1 ENST00000470953.1 ENST00000472262.1 ENST00000473229.1 ENST00000488037.1 |
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| CDS CCA 90 bp | TTCTCTGGTTTTGGTTTCTTCTCCCCTGGAGGTGGCTGCTGCTGTTaGATCTTCTGCTTCTGTTGGAATTTCTCTAGCTTCTCCCGTTTC | + |
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Preference number: 5 (lower is better) Translates to: FSGFGFFSPGGGCCC*IFCFCWNFSSFSRF Trigger: GAAACGGGAGAAGCTAGAGAAATTCCAACAGAAGCAGAAGATCCAACAGCAGCAGCCACCTCCAGGGGAGAAGAAACCAAAACCAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000424974.1 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461732.5 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000491744.1 ENST00000495010.5 ENST00000496018.5 |
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| CDS CCA 90 bp | ACAAATTCATCGAAGACAATGGGAAGGCTCCGAGACAGGAATGGGTaGATCACGTTCTTCCCCTTCAGGTGCTGGTATCTGGTATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: TNSSKTMGRLRDRNG*ITFFPFRCWYLVSL Trigger: CAAAGATACCAGATACCAGCACCTGAAGGGGAAGAACGTGATCCACCCATTCCTGTCTCGGAGCCTTCCCATTGTCTTCGATGAATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461328.1 ENST00000463326.1 ENST00000476915.1 ENST00000486768.1 ENST00000489089.1 ENST00000490548.1 |
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| CDS CCA 72 bp | CTTTGTGACAGGGAGCGTTTCCGGGCCTGCGGGTCCTaGCGGGGGCGGCCGTGCCCCGCCTGCGAGTGCGCG | + |
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Preference number: 6 (lower is better) Translates to: LCDRERFRACGS*RGRPCPACECA Trigger: CGCGCACTCGCAGGCGGGGCACGGCCGCCCCCGCCAGGACCCGCAGGCCCGGAAACGCTCCCTGTCACAAAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000211402.10 ENST00000422694.6 ENST00000424974.1 ENST00000435657.6 ENST00000457796.6 |
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| CDS GCA 72 bp | GGCGGGAGCCCCCAGGGCCAGAACAGCCACCACACCTaGGCTGGCCAGGGCCTGCACGTAGCCCGACACCGC | + |
|
Preference number: 6 (lower is better) Translates to: GGSPQGQNSHHT*AGQGLHVARHR Trigger: GCGGTGTCGGGCTACGTGCAGGCCCTGGCCAGCGCAGGTGTGGTGGCTGTTCTGGCCCTGGGGGCTCCCGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS CCA 72 bp | CGGAGGTCACCCCGAGTCACAGCGGCGCTGGCAGCCTaGGCCATCTCCCCGCAGCGAACGTACCACTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RRSPRVTAALAA*AISPQRTYHCG Trigger: GCCGCAGTGGTACGTTCGCTGCGGGGAGATGGCCCAGGCTGCCAGCGCCGCTGTGACTCGGGGTGACCTCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 24 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000459886.1 ENST00000461265.5 ENST00000461874.1 ENST00000462575.1 ENST00000470738.1 ENST00000473650.1 ENST00000473729.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000483266.1 ENST00000483275.1 ENST00000486789.1 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 ENST00000497172.1 |
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| CDS CCA 72 bp | GAGCCCCCAGGGCCAGAACAGCCACCACACCTGCGCTaGCCAGGGCCTGCACGTAGCCCGACACCGCCGATG | + |
|
Preference number: 6 (lower is better) Translates to: EPPGPEQPPHLR*PGPARSPTPPM Trigger: CATCGGCGGTGTCGGGCTACGTGCAGGCCCTGGCCAGCGCAGGTGTGGTGGCTGTTCTGGCCCTGGGGGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS GCA 72 bp | CCCGAGGCAGCACGGCGTTCCCGCAGACGCTGGGCCTaGCGCTGGGCCTCAACTCGCTTGGCTTGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PEAARRSRRRWA*RWASTRLACSL Trigger: CAAGCTGCAAGCCAAGCGAGTTGAGGCCCAGCGGCAGGCCCAGCGTCTGCGGGAACGCCGTGCTGCCTCGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS CCA 72 bp | GCAGGATGCGGAGGTCACCCCGAGTCACAGCGGCGCTaGCAGCCTGGGCCATCTCCCCGCAGCGAACGTACC | + |
|
Preference number: 6 (lower is better) Translates to: AGCGGHPESQRR*QPGPSPRSERT Trigger: GGTACGTTCGCTGCGGGGAGATGGCCCAGGCTGCCAGCGCCGCTGTGACTCGGGGTGACCTCCGCATCCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 24 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000459886.1 ENST00000461265.5 ENST00000461874.1 ENST00000462575.1 ENST00000470738.1 ENST00000473650.1 ENST00000473729.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000483266.1 ENST00000483275.1 ENST00000486789.1 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 ENST00000497172.1 |
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| CDS CCA 72 bp | GAGCAGCGATCAGAAGCCAGAGCCACAGCGCAACCCTaGGGGGCGGGAGCCCCCAGGGCCAGAACAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: EQRSEARATAQP*GAGAPRARTAT Trigger: GGTGGCTGTTCTGGCCCTGGGGGCTCCCGCCCCCCAGGGTTGCGCTGTGGCTCTGGCTTCTGATCGCTGCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS CCA 72 bp | GCAGCACGGCGTTCCCGCAGACGCTGGGCCTGCCGCTaGGCCTCAACTCGCTTGGCTTGCAGCTTGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AARRSRRRWACR*ASTRLACSLPS Trigger: GCTGGGCAAGCTGCAAGCCAAGCGAGTTGAGGCCCAGCGGCAGGCCCAGCGTCTGCGGGAACGCCGTGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS CCA 72 bp | GCACGTAGCCCGACACCGCCGATGCCAGGGCGCCCGTaGCCTCATCCGCCACTTCCAGGAAACAGTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARSPTPPMPGRP*PHPPLPGNSQA Trigger: GGCCTGACTGTTTCCTGGAAGTGGCGGATGAGGCCACGGGCGCCCTGGCATCGGCGGTGTCGGGCTACGTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
||
| CDS TCA 72 bp | GGTTGTAGTCGGCCCGCAGGGAGCGCACGGCTCGCGTaGTGCTTAGCGCCAGCTCAAGGGCGGCTTCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GCSRPAGSARLA*CLAPAQGRLLP Trigger: AGGCAGAAGCCGCCCTTGAGCTGGCGCTAAGCATCACGCGAGCCGTGCGCTCCCTGCGGGCCGACTACAACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
||
| CDS TCA 72 bp | CCGCCACTTCCAGGAAACAGTCAGGCCGGATCCGGGTaGGGTTGTAGTCGGCCCGCAGGGAGCGCACGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PPLPGNSQAGSG*GCSRPAGSARL Trigger: GAGCCGTGCGCTCCCTGCGGGCCGACTACAACCTCACCCGGATCCGGCCTGACTGTTTCCTGGAAGTGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS GCA 72 bp | GCAGCCTGGGCCATCTCCCCGCAGCGAACGTACCACTaGGGCCGCAGCAGAGGCTCTACCACGTCCTTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: AAWAISPQRTYH*GRSRGSTTSFD Trigger: GTCGAAGGACGTGGTAGAGCCTCTGCTGCGGCCGCAGTGGTACGTTCGCTGCGGGGAGATGGCCCAGGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000473729.5 ENST00000474643.5 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS GCA 72 bp | AGGCATGCCATGTGCGCTGATGGGCCTCAGGCAGGATaGGGAGGTCACCCCGAGTCACAGCGGCGCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RHAMCADGPQAG*GGHPESQRRWQ Trigger: CTGCCAGCGCCGCTGTGACTCGGGGTGACCTCCGCATCCTGCCTGAGGCCCATCAGCGCACATGGCATGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000459886.1 ENST00000461265.5 ENST00000461874.1 ENST00000462575.1 ENST00000470738.1 ENST00000473650.1 ENST00000473729.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000483266.1 ENST00000483275.1 ENST00000486789.1 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 ENST00000497172.1 |
||
| CDS TCA 72 bp | AGAAATCAGGGAGGGCCTGATGGAGCCTGGCCCGAGTaGGCCCTGCTCAGCCCTCGGCAAGCCCCTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RNQGGPDGAWPE*ALLSPRQAPPT Trigger: TGTGGGAGGGGCTTGCCGAGGGCTGAGCAGGGCTCACTCGGGCCAGGCTCCATCAGGCCCTCCCTGATTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000459886.1 ENST00000461874.1 ENST00000462575.1 ENST00000473650.1 ENST00000486789.1 ENST00000497172.1 |
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| CDS CCA 72 bp | AGCCGCAGGCCAACGTCCAGGCAAGTGTACAGGGTCTaGCGGGCACACTCAGCTGCCACCTGGTCCACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRRPTSRQVYRV*RAHSAATWSTP Trigger: TGGGGTGGACCAGGTGGCAGCTGAGTGTGCCCGCCAGACCCTGTACACTTGCCTGGACGTTGGCCTGCGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS CCA 72 bp | GCCCTGGGCACAGGAATCACTGAGCAGGGCCCAGGCTaGATTTCAACCCCACACCAGCCCCCAGGTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALGTGITEQGPG*ISTPHQPPGQA Trigger: GGCCTGACCTGGGGGCTGGTGTGGGGTTGAAATCCAGCCTGGGCCCTGCTCAGTGATTCCTGTGCCCAGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478549.1 |
||
| CDS CAA 72 bp | CCTGGGCCGAGCTTCGGAGTCCCAGGGCCGGCAGCGTaGCTCCACAGGCAGCTGGTATTAACTCCGTGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: PGPSFGVPGPAA*LHRQLVLTPCR Trigger: CCGACACGGAGTTAATACCAGCTGCCTGTGGAGCAACGCTGCCGGCCCTGGGACTCCGAAGCTCGGCCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000417430.1 ENST00000419375.1 ENST00000422694.6 ENST00000424974.1 ENST00000424984.1 ENST00000425144.5 ENST00000425864.1 ENST00000428505.1 ENST00000435657.6 ENST00000440048.1 ENST00000455956.1 ENST00000457796.6 |
||
| CDS TCA 72 bp | GGTCTAGGACGTATCGGAAAGGCAGCAGCAAGGCTGTaGCAGCCGCCAGGTCAGCCAGAGTGGGGGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GLGRIGKAAARL*QPPGQPEWGPP Trigger: GGGAGGCCCCCACTCTGGCTGACCTGGCGGCTGTCACAGCCTTGCTGCTGCCTTTCCGATACGTCCTAGACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000424974.1 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
||
| CDS TCA 72 bp | GCAGCCTCTGGAACAGCTCCTCCGTCACGAAGGGCATaGAGGGTGAGAGCAGCCGCAGGCCAACGTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AASGTAPPSRRA*RVRAAAGQRPG Trigger: GCCTGGACGTTGGCCTGCGGCTGCTCTCACCCTTCATGCCCTTCGTGACGGAGGAGCTGTTCCAGAGGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS CCA 72 bp | TCCCCACGCATGCGGTGCCATCGAGTCAGGGAGTCCTaGATGGCGTTGGTGAGTGCATGGCCCAGGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SPRMRCHRVRES*MALVSAWPRCR Trigger: CCTGCACCTGGGCCATGCACTCACCAACGCCATCCAGGACTCCCTGACTCGATGGCACCGCATGCGTGGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000460877.1 ENST00000461732.5 ENST00000465840.1 ENST00000470081.1 ENST00000473547.1 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000489979.1 ENST00000495010.5 ENST00000495738.1 ENST00000496018.5 |
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| CDS TCA 72 bp | TCCCGGATGTTGTCCATCCAGGCATGCCATGTGCGCTaGTGGGCCTCAGGCAGGATGCGGAGGTCACCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SRMLSIQACHVR*WASGRMRRSPR Trigger: TCGGGGTGACCTCCGCATCCTGCCTGAGGCCCATCAGCGCACATGGCATGCCTGGATGGACAACATCCGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000470738.1 ENST00000473729.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000483266.1 ENST00000483275.1 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS TCA 72 bp | TGGCTTCATCTGCCTCCTGGACTTCGAGCGGCACCTTaGCAGGATAGCCCGAGGCAGCACGGCGTTCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: WLHLPPGLRAAP*QDSPRQHGVPA Trigger: TGCGGGAACGCCGTGCTGCCTCGGGCTATCCTGTCAAGGTGCCGCTCGAAGTCCAGGAGGCAGATGAAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS TCA 72 bp | CACCGGATGTTGTCCATCCAGGCATGCCATGTGCGCTaGTGGGCCTCAGGCAGGATGCGGAGGTCACCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: HRMLSIQACHVR*WASGRMRRSPR Trigger: TCGGGGTGACCTCCGCATCCTGCCTGAGGCCCATCAGCGCACATGGCATGCCTGGATGGACAACATCCGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000459886.1 ENST00000461874.1 ENST00000462575.1 ENST00000473650.1 ENST00000486789.1 ENST00000497172.1 |
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| CDS TCA 72 bp | ATGGAGGTAGACCTGCAGAGCAGGTGGGGAGGCCCATaGGACTCAGTCCTCTCCTTCCCCGGCCTCAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: MEVDLQSRWGGP*DSVLSFPGLSA Trigger: GGCACTGAGGCCGGGGAAGGAGAGGACTGAGTCTCATGGGCCTCCCCACCTGCTCTGCAGGTCTACCTCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000459667.1 ENST00000471313.1 ENST00000476714.1 ENST00000478549.1 ENST00000485047.1 ENST00000487025.1 |
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| CDS GCA 72 bp | CTCAACTCGCTTGGCTTGCAGCTTGCCCAGCTCCCGTaGAGGGTCCACCAGCCCCTGAAGCTGCAGGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LNSLGLQLAQLP*RVHQPLKLQVD Trigger: ATCCACCTGCAGCTTCAGGGGCTGGTGGACCCTGCACGGGAGCTGGGCAAGCTGCAAGCCAAGCGAGTTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 |
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| CDS GCA 72 bp | CAGTGCCGTGGCTGGGAGCACTCTGGGAAGGAGACGTaGTGGCAGAGAGGGATCGGGATCTCCGTCACTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QCRGWEHSGKET*WQRGIGISVTH Trigger: GTGAGTGACGGAGATCCCGATCCCTCTCTGCCAGCACGTCTCCTTCCCAGAGTGCTCCCAGCCACGGCACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000460877.1 ENST00000465840.1 ENST00000467893.5 ENST00000470081.1 ENST00000473547.1 ENST00000489979.1 ENST00000495738.1 |
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| CDS CAA 72 bp | ACGAGAGGTACAGGGCTCACGGCTGGAGGTCTAGCCTaGAGCCCTCGCTGTGCCTGTGAGGACTGGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TRGTGLTAGGLA*SPRCACEDWEG Trigger: CCCTTCCCAGTCCTCACAGGCACAGCGAGGGCTCAAGGCTAGACCTCCAGCCGTGAGCCCTGTACCTCTCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS CAA 90 bp | CCTCCAGACCCTCAAAGCCCCGCCTTGCCTTGCTGGAGACTGATCTaGTCAGGGGACACTCCGAACTCCTTGGCTGCCTTCTCCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPDPQSPALPCWRLI*SGDTPNSLAAFSRA Trigger: GGCCCGGGAGAAGGCAGCCAAGGAGTTCGGAGTGTCCCCTGACAAGATCAGTCTCCAGCAAGGCAAGGCGGGGCTTTGAGGGTCTGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000459794.1 ENST00000459886.1 ENST00000461874.1 ENST00000462575.1 ENST00000466721.1 ENST00000466837.1 ENST00000473650.1 ENST00000479051.1 ENST00000482300.1 ENST00000486789.1 ENST00000491745.1 ENST00000497172.1 |
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| CDS TCA 72 bp | GGCTGGAGGTCTAGCCTTGAGCCCTCGCTGTGCCTGTaGGGACTGGGAAGGGGATGGGTTGGCTTAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GWRSSLEPSLCL*GLGRGWVGLGL Trigger: GAGACCTAAGCCAACCCATCCCCTTCCCAGTCCTCACAGGCACAGCGAGGGCTCAAGGCTAGACCTCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS GCA 72 bp | CAGACTTCCTGTAGAAAGGCCTCGCGGCCCAGCTGGTaGCGGCTCAGTCCCTGCTCACGCCATAGCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QTSCRKASRPSW*RLSPCSRHSFF Trigger: GAAGAAGCTATGGCGTGAGCAGGGACTGAGCCGGCACCAGCTGGGCCGCGAGGCCTTTCTACAGGAAGTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000460877.1 ENST00000461732.5 ENST00000465840.1 ENST00000470081.1 ENST00000473547.1 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000489979.1 ENST00000495010.5 ENST00000495738.1 ENST00000496018.5 |
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| CDS CCA 72 bp | GAACGAAGTGGAAAAACTGGAGGGAGATGGTCAGACTaGGCCGGGAATCCACCTCACAGCCAGGCGCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ERSGKTGGRWSD*AGNPPHSQAPA Trigger: GGCCGGCGCCTGGCTGTGAGGTGGATTCCCGGCCCAGTCTGACCATCTCCCTCCAGTTTTTCCACTTCGTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000424974.1 ENST00000435657.6 ENST00000457796.6 |
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| CDS CCA 72 bp | TTCCAGACTTCCTGTAGAAAGGCCTCGCGGCCCAGCTaGTGCCGGCTCAGTCCCTGCTCACGCCATAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FQTSCRKASRPS*CRLSPCSRHSF Trigger: GAAGCTATGGCGTGAGCAGGGACTGAGCCGGCACCAGCTGGGCCGCGAGGCCTTTCTACAGGAAGTCTGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000460877.1 ENST00000461732.5 ENST00000465840.1 ENST00000470081.1 ENST00000473547.1 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000489979.1 ENST00000495010.5 ENST00000495738.1 ENST00000496018.5 |
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| CDS CCA 72 bp | TGCCGTGGCTGGGAGCACTCTGGGAAGGAGACGTGCTaGCAGAGAGGGATCGGGATCTCCGTCACTCACATC | + |
|
Preference number: 6 (lower is better) Translates to: CRGWEHSGKETC*QRGIGISVTHI Trigger: GATGTGAGTGACGGAGATCCCGATCCCTCTCTGCCAGCACGTCTCCTTCCCAGAGTGCTCCCAGCCACGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000460877.1 ENST00000465840.1 ENST00000467893.5 ENST00000470081.1 ENST00000473547.1 ENST00000489979.1 ENST00000495738.1 |
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| CDS CCA 72 bp | CAGGCCCCCACCCTCACTTGCAAAGTGGCACCACCATaGGGTTGTCCTCAATGCCACGGAACAGTCCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: QAPTLTCKVAPP*GCPQCHGTVPA Trigger: AGCGGGGACTGTTCCGTGGCATTGAGGACAACCCCATGGTGGTGCCACTTTGCAAGTGAGGGTGGGGGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000461328.1 ENST00000463326.1 ENST00000476915.1 ENST00000486768.1 ENST00000489089.1 ENST00000490548.1 |
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| CDS CAA 90 bp | TCTACCACGTCCTTCGACCGGTTGCAAAGTGGCACCACCATGGGGTaGTCCTCAATGCCACGGAACAGTCCCCGCTCCTTCAGCGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: STTSFDRLQSGTTMG*SSMPRNSPRSFSAT Trigger: GGTGGCGCTGAAGGAGCGGGGACTGTTCCGTGGCATTGAGGACAACCCCATGGTGGTGCCACTTTGCAACCGGTCGAAGGACGTGGTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000473729.5 ENST00000474643.5 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS CAA 90 bp | TTGCCTTGCTGGAGACTGATCTTGTCAGGGGACACTCCGAACTCCTaGGCTGCCTTCTCCCGGGCCTCCGCCTCATTGCGTCCACTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LPCWRLILSGDTPNS*AAFSRASASLRPLT Trigger: GGTGAGTGGACGCAATGAGGCGGAGGCCCGGGAGAAGGCAGCCAAGGAGTTCGGAGTGTCCCCTGACAAGATCAGTCTCCAGCAAGGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000459886.1 ENST00000461874.1 ENST00000462575.1 ENST00000473650.1 ENST00000486789.1 ENST00000497172.1 |
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| CDS TCA 72 bp | CACAGGCAGCTGGTATTAACTCCGTGTCGGCGTAACTaGCCCACTGTTGGACAAGGACAGCCGCCCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HRQLVLTPCRRN*PTVGQGQPPGC Trigger: GCAGCCGGGCGGCTGTCCTTGTCCAACAGTGGGTCAGTTACGCCGACACGGAGTTAATACCAGCTGCCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000417430.1 ENST00000419375.1 ENST00000422694.6 ENST00000424974.1 ENST00000424984.1 ENST00000425144.5 ENST00000425864.1 ENST00000428505.1 ENST00000435657.6 ENST00000440048.1 ENST00000455956.1 ENST00000457796.6 |
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| CDS TCA 72 bp | CTGGAACAGCTCCTCCGTCACGAAGGGCATGAAGGGTaGGAGCAGCCGCAGGCCAACGTCCAGGCAAGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LEQLLRHEGHEG*EQPQANVQASV Trigger: TACACTTGCCTGGACGTTGGCCTGCGGCTGCTCTCACCCTTCATGCCCTTCGTGACGGAGGAGCTGTTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS TCA 72 bp | AGGGGAAGACTGCGGGATCGAGGTGGGTCCTATGTTTaGGTAGAGAGGGGACCCTCACGGGAGCTCCTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: RGRLRDRGGSYV*VERGPSRELLR Trigger: GCGAAGGAGCTCCCGTGAGGGTCCCCTCTCTACTCAAACATAGGACCCACCTCGATCCCGCAGTCTTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000417430.1 ENST00000419375.1 ENST00000424984.1 ENST00000425864.1 ENST00000428505.1 ENST00000440048.1 |
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| CDS GCA 72 bp | GGTTGCAAAGTGGCACCACCATGGGGTTGTCCTCAATaGCACGGAACAGTCCCCGCTCCTTCAGCGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GCKVAPPWGCPQ*HGTVPAPSAPP Trigger: TGGTGGCGCTGAAGGAGCGGGGACTGTTCCGTGGCATTGAGGACAACCCCATGGTGGTGCCACTTTGCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000473729.5 ENST00000474643.5 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS GCA 72 bp | ACTGATCTTGTCAGGGGACACTCCGAACTCCTTGGCTaGCTTCTCCCGGGCCTCCGCCTCATTGCGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: TDLVRGHSELLG*LLPGLRLIAST Trigger: AGTGGACGCAATGAGGCGGAGGCCCGGGAGAAGGCAGCCAAGGAGTTCGGAGTGTCCCCTGACAAGATCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 36 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000420919.1 ENST00000422694.6 ENST00000425144.5 ENST00000428445.1 ENST00000428796.1 ENST00000435299.1 ENST00000435657.6 ENST00000445152.1 ENST00000446350.1 ENST00000457796.6 ENST00000459886.1 ENST00000461265.5 ENST00000461874.1 ENST00000462575.1 ENST00000462946.5 ENST00000469542.5 ENST00000470738.1 ENST00000473650.1 ENST00000473729.5 ENST00000474299.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000482996.5 ENST00000483266.1 ENST00000483275.1 ENST00000486789.1 ENST00000487524.5 ENST00000488448.5 ENST00000491232.5 ENST00000494362.5 ENST00000495637.5 ENST00000497172.1 |
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| CDS CCA 72 bp | CCACGTCCTTCGACCGGTTGCAAAGTGGCACCACCATaGGGTTGTCCTCAATGCCACGGAACAGTCCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRPSTGCKVAPP*GCPQCHGTVPA Trigger: AGCGGGGACTGTTCCGTGGCATTGAGGACAACCCCATGGTGGTGCCACTTTGCAACCGGTCGAAGGACGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000420919.1 ENST00000422694.6 ENST00000425144.5 ENST00000428445.1 ENST00000428796.1 ENST00000435299.1 ENST00000435657.6 ENST00000445152.1 ENST00000446350.1 ENST00000457796.6 ENST00000461265.5 ENST00000473729.5 ENST00000474643.5 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS CCA 72 bp | GTGTACAGGGTCTGGCGGGCACACTCAGCTGCCACCTaGTCCACCCCATTCAGTACAGGTTTCAGGCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: VYRVWRAHSAAT*STPFSTGFRHS Trigger: GGAGTGCCTGAAACCTGTACTGAATGGGGTGGACCAGGTGGCAGCTGAGTGTGCCCGCCAGACCCTGTACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS CCA 72 bp | GAGCCGAGGACCTGGCTCTCAGAGGGGCAGTGTCAGTaGGGAGTTCCTGGGGAAGAGGAACTATCCACCATC | + |
|
Preference number: 6 (lower is better) Translates to: EPRTWLSEGQCQ*GVPGEEELSTI Trigger: GATGGTGGATAGTTCCTCTTCCCCAGGAACTCCCCACTGACACTGCCCCTCTGAGAGCCAGGTCCTCGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000417430.1 ENST00000419375.1 ENST00000424984.1 ENST00000425864.1 ENST00000428505.1 ENST00000440048.1 |
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| CDS CCA 72 bp | CTCCCTCCAGACCCTCAAAGCCCCGCCTTGCCTTGCTaGAGACTGATCTTGTCAGGGGACACTCCGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPPDPQSPALPC*RLILSGDTPNS Trigger: GGAGTTCGGAGTGTCCCCTGACAAGATCAGTCTCCAGCAAGGCAAGGCGGGGCTTTGAGGGTCTGGAGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000459794.1 ENST00000459886.1 ENST00000461874.1 ENST00000462575.1 ENST00000466721.1 ENST00000466837.1 ENST00000473650.1 ENST00000479051.1 ENST00000482300.1 ENST00000486789.1 ENST00000491745.1 ENST00000497172.1 |
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| CDS CCA 72 bp | ACTTGCTCATCTTCCGGCCGTGAGCATCTCGCACGATaGCATGGAGGTAGACCTGCAGAGCAGGTGGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TCSSSGREHLAR*HGGRPAEQVGR Trigger: CCTCCCCACCTGCTCTGCAGGTCTACCTCCATGCCATCGTGCGAGATGCTCACGGCCGGAAGATGAGCAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000459667.1 ENST00000471313.1 ENST00000476714.1 ENST00000478549.1 ENST00000485047.1 ENST00000487025.1 |
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| CDS CAA 72 bp | TGGAGACTGATCTTGTCAGGGGACACTCCGAACTCCTaGGCTGCCTTCTCCCGGGCCTCCGCCTCATTGCGT | + |
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Preference number: 6 (lower is better) Translates to: WRLILSGDTPNS*AAFSRASASLR Trigger: ACGCAATGAGGCGGAGGCCCGGGAGAAGGCAGCCAAGGAGTTCGGAGTGTCCCCTGACAAGATCAGTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 42 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000420919.1 ENST00000422694.6 ENST00000425144.5 ENST00000428445.1 ENST00000428796.1 ENST00000435299.1 ENST00000435657.6 ENST00000445152.1 ENST00000446350.1 ENST00000457796.6 ENST00000459794.1 ENST00000459886.1 ENST00000461265.5 ENST00000461874.1 ENST00000462575.1 ENST00000462946.5 ENST00000466721.1 ENST00000466837.1 ENST00000469542.5 ENST00000470738.1 ENST00000473650.1 ENST00000473729.5 ENST00000474299.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000479051.1 ENST00000481216.1 ENST00000482300.1 ENST00000482996.5 ENST00000483266.1 ENST00000483275.1 ENST00000486789.1 ENST00000487524.5 ENST00000488448.5 ENST00000491232.5 ENST00000491745.1 ENST00000494362.5 ENST00000495637.5 ENST00000497172.1 |
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| CDS CAA 72 bp | CAGGGGAAGACTGCGGGATCGAGGTGGGTCCTATGTTaGAGTAGAGAGGGGACCCTCACGGGAGCTCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: QGKTAGSRWVLC*SREGTLTGAPS Trigger: CGAAGGAGCTCCCGTGAGGGTCCCCTCTCTACTCAAACATAGGACCCACCTCGATCCCGCAGTCTTCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000417430.1 ENST00000419375.1 ENST00000424984.1 ENST00000425864.1 ENST00000428505.1 ENST00000440048.1 |
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| CDS CAA 90 bp | TCATCTTGCTGGAGACTGATCTTGTCAGGGGACACTCCGAACTCCTaGGCTGCCTTCTCCCGGGCCTCCGCCTCATTGCGTCCACTCACC | + |
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Preference number: 6 (lower is better) Translates to: SSCWRLILSGDTPNS*AAFSRASASLRPLT Trigger: GGTGAGTGGACGCAATGAGGCGGAGGCCCGGGAGAAGGCAGCCAAGGAGTTCGGAGTGTCCCCTGACAAGATCAGTCTCCAGCAAGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 30 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000420919.1 ENST00000422694.6 ENST00000425144.5 ENST00000428445.1 ENST00000428796.1 ENST00000435299.1 ENST00000435657.6 ENST00000445152.1 ENST00000446350.1 ENST00000457796.6 ENST00000461265.5 ENST00000462946.5 ENST00000469542.5 ENST00000470738.1 ENST00000473729.5 ENST00000474299.5 ENST00000474643.5 ENST00000475799.1 ENST00000478838.1 ENST00000481216.1 ENST00000482996.5 ENST00000483266.1 ENST00000483275.1 ENST00000487524.5 ENST00000488448.5 ENST00000491232.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS TCA 72 bp | CAGACCCTCAAAGCCCCGCCTTGCCTTGCTGGAGACTaGTCTTGTCAGGGGACACTCCGAACTCCTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: QTLKAPPCLAGD*SCQGTLRTPWL Trigger: CAGCCAAGGAGTTCGGAGTGTCCCCTGACAAGATCAGTCTCCAGCAAGGCAAGGCGGGGCTTTGAGGGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000459794.1 ENST00000459886.1 ENST00000461874.1 ENST00000462575.1 ENST00000466721.1 ENST00000466837.1 ENST00000473650.1 ENST00000479051.1 ENST00000482300.1 ENST00000486789.1 ENST00000491745.1 ENST00000497172.1 |
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| CDS GCA 72 bp | CAGGCAAGTGTACAGGGTCTGGCGGGCACACTCAGCTaGCACCTGGTCCACCCCATTCAGTACAGGTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QASVQGLAGTLS*HLVHPIQYRFQ Trigger: CTGAAACCTGTACTGAATGGGGTGGACCAGGTGGCAGCTGAGTGTGCCCGCCAGACCCTGTACACTTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461227.1 ENST00000463184.1 ENST00000479323.1 ENST00000481159.1 ENST00000482263.1 |
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| CDS GCA 72 bp | ACTTGCAAAGTGGCACCACCATGGGGTTGTCCTCAATaGCACGGAACAGTCCCCGCTCCTTCAGCGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: TCKVAPPWGCPQ*HGTVPAPSAPP Trigger: TGGTGGCGCTGAAGGAGCGGGGACTGTTCCGTGGCATTGAGGACAACCCCATGGTGGTGCCACTTTGCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000461328.1 ENST00000463326.1 ENST00000476915.1 ENST00000486768.1 ENST00000489089.1 ENST00000490548.1 |
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| CDS CCA 72 bp | CCCTGCTCACGCCATAGCTTCTTCTCCACCACCACCTaGGTGGCAATACCTGCATGGTCACAGCCAGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: PCSRHSFFSTTT*VAIPAWSQPGF Trigger: GAACCCTGGCTGTGACCATGCAGGTATTGCCACCCAGGTGGTGGTGGAGAAGAAGCTATGGCGTGAGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000460877.1 ENST00000461732.5 ENST00000465840.1 ENST00000470081.1 ENST00000473547.1 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000489979.1 ENST00000495010.5 ENST00000495738.1 ENST00000496018.5 |
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| CDS CCA 72 bp | TCGAAGACAATGGGAAGGCTCCGAGACAGGAATGGGTaGATCACGTTCTTCCCCTTCAGGTGCTGGGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SKTMGRLRDRNG*ITFFPFRCWGR Trigger: CCGCCCCCAGCACCTGAAGGGGAAGAACGTGATCCACCCATTCCTGTCTCGGAGCCTTCCCATTGTCTTCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000461265.5 ENST00000473729.5 ENST00000474643.5 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS CAA 72 bp | TCCTTCGACCGGTTGCAAAGTGGCACCACCATGGGGTaGTCCTCAATGCCACGGAACAGTCCCCGCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SFDRLQSGTTMG*SSMPRNSPRSF Trigger: GAAGGAGCGGGGACTGTTCCGTGGCATTGAGGACAACCCCATGGTGGTGCCACTTTGCAACCGGTCGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000420919.1 ENST00000422694.6 ENST00000425144.5 ENST00000428445.1 ENST00000428796.1 ENST00000435299.1 ENST00000435657.6 ENST00000445152.1 ENST00000446350.1 ENST00000457796.6 ENST00000461265.5 ENST00000473729.5 ENST00000474643.5 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS CAA 72 bp | CCTCAAAGCCCCGCCTTGCCTTGCTGGAGACTGATCTaGTCAGGGGACACTCCGAACTCCTTGGCTGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PQSPALPCWRLI*SGDTPNSLAAF Trigger: GAAGGCAGCCAAGGAGTTCGGAGTGTCCCCTGACAAGATCAGTCTCCAGCAAGGCAAGGCGGGGCTTTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000459794.1 ENST00000459886.1 ENST00000461874.1 ENST00000462575.1 ENST00000466721.1 ENST00000466837.1 ENST00000473650.1 ENST00000479051.1 ENST00000482300.1 ENST00000486789.1 ENST00000491745.1 ENST00000497172.1 |
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| CDS CAA 90 bp | AAAGAGAGACAGGGGAAGACTGCGGGATCGAGGTGGGTCCTATGTTaGAGTAGAGAGGGGACCCTCACGGGAGCTCCTTCGCCGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: KERQGKTAGSRWVLC*SREGTLTGAPSPQT Trigger: TGTCTGCGGCGAAGGAGCTCCCGTGAGGGTCCCCTCTCTACTCAAACATAGGACCCACCTCGATCCCGCAGTCTTCCCCTGTCTCTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000417430.1 ENST00000419375.1 ENST00000424984.1 ENST00000425864.1 ENST00000428505.1 ENST00000440048.1 |
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| CDS CAA 90 bp | GCTGATGGCCTCCAGCCCGTGCCGCTGCCCAACTTCATAGTCATTTaGGTCATGTGCGGGGGTGATCTTCACAGCACCTGTGCCAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ADGLQPVPLPNFIVI*VMCGGDLHSTCAKV Trigger: GACTTTGGCACAGGTGCTGTGAAGATCACCCCCGCACATGACCAAAATGACTATGAAGTTGGGCAGCGGCACGGGCTGGAGGCCATCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000461328.1 ENST00000463326.1 ENST00000473729.5 ENST00000474643.5 ENST00000476915.1 ENST00000486768.1 ENST00000488448.5 ENST00000489089.1 ENST00000490548.1 ENST00000494362.5 ENST00000495637.5 |
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| CDS CCA 72 bp | GCTCACGCCATAGCTTCTTCTCCACCACCACCTGGGTaGCAATACCTGCATGGTCACAGCCAGGGTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: AHAIASSPPPPG*QYLHGHSQGST Trigger: TGTGGAACCCTGGCTGTGACCATGCAGGTATTGCCACCCAGGTGGTGGTGGAGAAGAAGCTATGGCGTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000460877.1 ENST00000461732.5 ENST00000465840.1 ENST00000470081.1 ENST00000473547.1 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000489979.1 ENST00000495010.5 ENST00000495738.1 ENST00000496018.5 |
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| CDS CAA 72 bp | ACAACTCCCTCCAGACCCTCAAAGCCCCGCCTTGCCTaGCTGGAGACTGATCTTGTCAGGGGACACTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: TTPSRPSKPRLA*LETDLVRGHSE Trigger: TTCGGAGTGTCCCCTGACAAGATCAGTCTCCAGCAAGGCAAGGCGGGGCTTTGAGGGTCTGGAGGGAGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000459794.1 ENST00000459886.1 ENST00000461874.1 ENST00000462575.1 ENST00000466721.1 ENST00000466837.1 ENST00000473650.1 ENST00000479051.1 ENST00000482300.1 ENST00000486789.1 ENST00000491745.1 ENST00000497172.1 |
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| CDS TCA 72 bp | CTAGCACGGCTCGGAATTCTGGCTGCCGGACACACGTaGCAAACCAGCGAGTCACATTATTCCAGATCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LARLGILAAGHT*QTSESHYSRSG Trigger: GCCGGATCTGGAATAATGTGACTCGCTGGTTTGTCACGTGTGTCCGGCAGCCAGAATTCCGAGCCGTGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000424974.1 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461732.5 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000491744.1 ENST00000495010.5 ENST00000496018.5 |
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| CDS CCA 72 bp | GAGAAAGAGAGACAGGGGAAGACTGCGGGATCGAGGTaGGTCCTATGTTTGAGTAGAGAGGGGACCCTCACG | + |
|
Preference number: 6 (lower is better) Translates to: EKERQGKTAGSR*VLCLSREGTLT Trigger: CGTGAGGGTCCCCTCTCTACTCAAACATAGGACCCACCTCGATCCCGCAGTCTTCCCCTGTCTCTCTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000417430.1 ENST00000419375.1 ENST00000424984.1 ENST00000425864.1 ENST00000428505.1 ENST00000440048.1 |
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| CDS CAA 72 bp | CAGCCACATCTCCCAGCATTGTCTCGATCCGAGTTGTaGCCACCACCACCTCCTCGTCGCTATCTGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QPHLPALSRSEL*PPPPPRRYLSL Trigger: AAGGCTCAGATAGCGACGAGGAGGTGGTGGTGGCAACAACTCGGATCGAGACAATGCTGGGAGATGTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461328.1 ENST00000463326.1 ENST00000476915.1 ENST00000486768.1 ENST00000489089.1 ENST00000490548.1 |
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| CDS CAA 72 bp | CTCCAGCCCGTGCCGCTGCCCAACTTCATAGTCATTTaGGTCATGTGCGGGGGTGATCTTCACAGCACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LQPVPLPNFIVI*VMCGGDLHSTC Trigger: ACAGGTGCTGTGAAGATCACCCCCGCACATGACCAAAATGACTATGAAGTTGGGCAGCGGCACGGGCTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000461328.1 ENST00000463326.1 ENST00000473729.5 ENST00000474643.5 ENST00000476915.1 ENST00000486768.1 ENST00000488448.5 ENST00000489089.1 ENST00000490548.1 ENST00000494362.5 ENST00000495637.5 |
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| CDS GCA 72 bp | GACTGGTTTTCTCTGTGTCTGTGCAGTTTACTCCACTaGTTCTCTCTGGCGGAACCCAGGAGGCAGGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: DWFSLCLCSLLH*FSLAEPRRQGT Trigger: TGTCCCCTGCCTCCTGGGTTCCGCCAGAGAGAAGCAGTGGAGTAAACTGCACAGACACAGAGAAAACCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000469502.1 ENST00000470953.1 ENST00000472262.1 ENST00000473229.1 ENST00000488037.1 |
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| CDS CCA 72 bp | TTCATCGAAGACAATGGGAAGGCTCCGAGACAGGAATaGGTGGATCACGTTCTTCCCCTTCAGGTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FIEDNGKAPRQE*VDHVLPLQVLG Trigger: CCCCAGCACCTGAAGGGGAAGAACGTGATCCACCCATTCCTGTCTCGGAGCCTTCCCATTGTCTTCGATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000461265.5 ENST00000473729.5 ENST00000474643.5 ENST00000488448.5 ENST00000494362.5 ENST00000495637.5 |
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| CDS GCA 72 bp | AGAACCACTTCTCCTAGCACGGCTCGGAATTCTGGCTaGCGGACACACGTGACAAACCAGCGAGTCACATTA | + |
|
Preference number: 6 (lower is better) Translates to: RTTSPSTARNSG*RTHVTNQRVTL Trigger: TAATGTGACTCGCTGGTTTGTCACGTGTGTCCGGCAGCCAGAATTCCGAGCCGTGCTAGGAGAAGTGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000424974.1 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461732.5 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000491744.1 ENST00000495010.5 ENST00000496018.5 |
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| CDS CCA 72 bp | CGTTCTTCCCCTTCAGGTGCTGGTATCTGGTATCTTTaGGGTGCACAGCTACAGCCACATCTCCCAGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: RSSPSGAGIWYL*GAQLQPHLPAL Trigger: CAATGCTGGGAGATGTGGCTGTAGCTGTGCACCCCAAAGATACCAGATACCAGCACCTGAAGGGGAAGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461328.1 ENST00000463326.1 ENST00000476915.1 ENST00000486768.1 ENST00000489089.1 ENST00000490548.1 |
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| CDS CCA 72 bp | TCGAAGACAATGGGAAGGCTCCGAGACAGGAATGGGTaGATCACGTTCTTCCCCTTCAGGTGCTGGTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: SKTMGRLRDRNG*ITFFPFRCWYL Trigger: CAGATACCAGCACCTGAAGGGGAAGAACGTGATCCACCCATTCCTGTCTCGGAGCCTTCCCATTGTCTTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461328.1 ENST00000463326.1 ENST00000476915.1 ENST00000486768.1 ENST00000489089.1 ENST00000490548.1 |
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| CDS CCA 72 bp | TTCATCGAAGACAATGGGAAGGCTCCGAGACAGGAATaGGTGGATCACGTTCTTCCCCTTCAGGTGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FIEDNGKAPRQE*VDHVLPLQVLV Trigger: TACCAGCACCTGAAGGGGAAGAACGTGATCCACCCATTCCTGTCTCGGAGCCTTCCCATTGTCTTCGATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461328.1 ENST00000463326.1 ENST00000476915.1 ENST00000486768.1 ENST00000489089.1 ENST00000490548.1 |
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| CDS CAA 72 bp | ACGTTCTTCCCCTTCAGGTGCTGGTATCTGGTATCTTaGGGGTGCACAGCTACAGCCACATCTCCCAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: TFFPFRCWYLVS*GCTATATSPSI Trigger: AATGCTGGGAGATGTGGCTGTAGCTGTGCACCCCAAAGATACCAGATACCAGCACCTGAAGGGGAAGAACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461328.1 ENST00000463326.1 ENST00000476915.1 ENST00000486768.1 ENST00000489089.1 ENST00000490548.1 |
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| CDS TCA 72 bp | CTGAGTGTCCCCAAGAGCTCGTTGAGCGCCTTTATGTaGATCAGAAGCACTCCTTCCTCTGGGAAGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSVPKSSLSAFM*IRSTPSSGKMK Trigger: CTTCATCTTCCCAGAGGAAGGAGTGCTTCTGATTCACATAAAGGCGCTCAACGAGCTCTTGGGGACACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000459667.1 ENST00000471313.1 ENST00000476714.1 ENST00000478549.1 ENST00000485047.1 ENST00000487025.1 |
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| CDS TCA 72 bp | GATGCACATCATGAAGACACCTCGGGGATTTGCTGCTaGCACATTAGGACGCCCATACTCTGGCTTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DAHHEDTSGICC*HIRTPILWLEE Trigger: TTCTTCAAGCCAGAGTATGGGCGTCCTAATGTGTCAGCAGCAAATCCCCGAGGTGTCTTCATGATGTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000424974.1 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000460877.1 ENST00000461732.5 ENST00000465840.1 ENST00000467893.5 ENST00000470081.1 ENST00000473547.1 ENST00000478826.5 ENST00000482057.5 ENST00000489382.5 ENST00000489979.1 ENST00000491744.1 ENST00000495010.5 ENST00000495738.1 ENST00000496018.5 |
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| CDS CCA 72 bp | TGCCAAAGTCCATGTCCACAAATTCATCGAAGACAATaGGAAGGCTCCGAGACAGGAATGGGTGGATCACGT | + |
|
Preference number: 6 (lower is better) Translates to: CQSPCPQIHRRQ*EGSETGMGGSR Trigger: ACGTGATCCACCCATTCCTGTCTCGGAGCCTTCCCATTGTCTTCGATGAATTTGTGGACATGGACTTTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000211402.10 ENST00000375663.8 ENST00000422694.6 ENST00000425144.5 ENST00000435657.6 ENST00000457796.6 ENST00000461265.5 ENST00000461328.1 ENST00000463326.1 ENST00000473729.5 ENST00000474643.5 ENST00000476915.1 ENST00000486768.1 ENST00000488448.5 ENST00000489089.1 ENST00000490548.1 ENST00000494362.5 ENST00000495637.5 |
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