RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VANGL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000173218

Ensembl transcript IDs: ENST00000310260.7, ENST00000355485.7, ENST00000369509.1, ENST00000369510.8, ENST00000474344.1, ENST00000478369.5

Found 731 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGGAGGCAAAGGCAGCCCAGTGCAAGAGGTCCGGATGGGGCTCCTaGAGGAGCTCCCCTGCAGCAGGGCTCCGCCAGGATGGCTCCTCT +
Preference number: 1 (lower is better)
Translates to: MEAKAAQCKRSGWGS*RSSPAAGLRQDGSS
Trigger: AGAGGAGCCATCCTGGCGGAGCCCTGCTGCAGGGGAGCTCCTTCAGGAGCCCCATCCGGACCTCTTGCACTGGGCTGCCTTTGCCTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 90 bp TCAAGGAGGCCAGGCCAGGGACTCCGGCTTGAGATCCCCACAGGATaGGGCTGTGGACAGCCCCTCTCACTCCAACCAGGGAAGAAGTTT +
Preference number: 1 (lower is better)
Translates to: SRRPGQGLRLEIPTG*GCGQPLSLQPGKKF
Trigger: AAACTTCTTCCCTGGTTGGAGTGAGAGGGGCTGTCCACAGCCCCATCCTGTGGGGATCTCAAGCCGGAGTCCCTGGCCTGGCCTCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 90 bp CTGGGCACCCCACACTTCCCTATGGAAACAATGCTGGGACTGACTTaGGGCTTCACACAGAGCCGGAGGGCACACATGGAGAGCCAGGGC +
Preference number: 1 (lower is better)
Translates to: LGTPHFPMETMLGLT*GFTQSRRAHMESQG
Trigger: GCCCTGGCTCTCCATGTGTGCCCTCCGGCTCTGTGTGAAGCCTCAAGTCAGTCCCAGCATTGTTTCCATAGGGAAGTGTGGGGTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 90 bp CACAGTGACGGTGGTCAGAAAACACAGGGACTGGACAGCAGCAGTTaGCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCT +
Preference number: 1 (lower is better)
Translates to: HSDGGQKTQGLDSSS*QRGWHGLVSFGRAA
Trigger: AGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGTCCCTGTGTTTTCTGACCACCGTCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 90 bp CACAGGGACTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTaGTCTCCTTTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACT +
Preference number: 1 (lower is better)
Translates to: HRDWTAAVASVVGMV*SPLAGQLALSLGRT
Trigger: AGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 90 bp GAGGCGATGAGTTGCACAGTGACGGTGGTCAGAAAACACAGGGACTaGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCT +
Preference number: 1 (lower is better)
Translates to: EAMSCTVTVVRKHRD*TAAVASVVGMVWSP
Trigger: AGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGTCCCTGTGTTTTCTGACCACCGTCACTGTGCAACTCATCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 90 bp GGTCAGAAAACACAGGGACTGGACAGCAGCAGTTGCCAGCGTGGTTaGCATGGTTTGGTCTCCTTTGGCAGGGCAGCTTGCTCTAAGCTT +
Preference number: 1 (lower is better)
Translates to: GQKTQGLDSSSCQRG*HGLVSFGRAACSKL
Trigger: AAGCTTAGAGCAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGTCCCTGTGTTTTCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 90 bp GCTCTGTCAAAAGTCTTGGGGGCAAGTGTGAGAAAGACGGTGGGATaGAAACTGCTTGCTGAGAACACCTACGTCAAGGAGGCCAGGCCA +
Preference number: 1 (lower is better)
Translates to: ALSKVLGASVRKTVG*KLLAENTYVKEARP
Trigger: TGGCCTGGCCTCCTTGACGTAGGTGTTCTCAGCAAGCAGTTTGCATCCCACCGTCTTTCTCACACTTGCCCCCAAGACTTTTGACAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 90 bp TGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCTTaGTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAAGTGG +
Preference number: 1 (lower is better)
Translates to: CQRGWHGLVSFGRAA*SKLGKNLRPQEIKW
Trigger: CCACTTAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 90 bp CCCAGATTGGAAGGTAAACCAAGGACTCACTTTTGTTGGTTTCACTaGGTGGCTGGAGCACTCACTCAGTACGTAGGTTGGAGTGGCAAG +
Preference number: 1 (lower is better)
Translates to: PRLEGKPRTHFCWFH*VAGALTQYVGWSGK
Trigger: CTTGCCACTCCAACCTACGTACTGAGTGAGTGCTCCAGCCACTCAGTGAAACCAACAAAAGTGAGTCCTTGGTTTACCTTCCAATCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 90 bp GCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAAGTaGCTCCAAGTTGCACCTGCCAATCCCAGAGTCACAGTGTTAGTC +
Preference number: 1 (lower is better)
Translates to: ACSKLGKNLRPQEIK*LQVAPANPRVTVLV
Trigger: GACTAACACTGTGACTCTGGGATTGGCAGGTGCAACTTGGAGCCACTTAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 90 bp AGCATAGTGGAGAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTaGAAGAAGAGATCCTGCCTCCCAATGAACTCTCACCCCAGGTTC +
Preference number: 1 (lower is better)
Translates to: SIVEKLSKGQGVNPK*KKRSCLPMNSHPRF
Trigger: GAACCTGGGGTGAGAGTTCATTGGGAGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTCTCCACTATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 90 bp GTTTCACTGAGTGGCTGGAGCACTCACTCAGTACGTAGGTTGGAGTaGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGGTAGCATC +
Preference number: 1 (lower is better)
Translates to: VSLSGWSTHSVRRLE*QGNQFLSVQYAGSI
Trigger: GATGCTACCAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTGAGTGAGTGCTCCAGCCACTCAGTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 90 bp ACCAGCTCCACTTTGGTTTACAGCTGTAACAGAAGCTCCAAGGAATaGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGT +
Preference number: 1 (lower is better)
Translates to: TSSTLVYSCNRSSKE*LLEKSHRQKSDVIS
Trigger: ACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTGGAGCTTCTGTTACAGCTGTAAACCAAAGTGGAGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR CCA 90 bp AATATGCATCCCCACTTAGGGATACTTACACAGCAGGACCCAGATTaGAAGGTAAACCAAGGACTCACTTTTGTTGGTTTCACTGAGTGG +
Preference number: 1 (lower is better)
Translates to: NMHPHLGILTQQDPD*KVNQGLTFVGFTEW
Trigger: CCACTCAGTGAAACCAACAAAAGTGAGTCCTTGGTTTACCTTCCAATCTGGGTCCTGCTGTGTAAGTATCCCTAAGTGGGGATGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 90 bp TTTACATGCTTGCAAATGTGTCAAAAGAGCCCACTACCCAGTTTATaGAGGAACTCACTCAGGCCTTGTCATACACATATGGTGACCATG +
Preference number: 1 (lower is better)
Translates to: FTCLQMCQKSPLPSL*RNSLRPCHTHMVTM
Trigger: CATGGTCACCATATGTGTATGACAAGGCCTGAGTGAGTTCCTGCATAAACTGGGTAGTGGGCTCTTTTGACACATTTGCAAGCATGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 90 bp GGACCTGTACAGATGGTTGCTGGTAGTGTCATTCATTCATTTACATaGTTGCAAATGTGTCAAAAGAGCCCACTACCCAGTTTATGCAGG +
Preference number: 1 (lower is better)
Translates to: GPVQMVAGSVIHSFT*LQMCQKSPLPSLCR
Trigger: CCTGCATAAACTGGGTAGTGGGCTCTTTTGACACATTTGCAAGCATGTAAATGAATGAATGACACTACCAGCAACCATCTGTACAGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 90 bp AACAACAGCATCCCTGTCTTGCAGCAGGTGTTAACACTGAAAGGCTaGGTTTTCCAGAAGGGATTCTCAAGTTCTTTCCATCAAATATCC +
Preference number: 1 (lower is better)
Translates to: NNSIPVLQQVLTLKG*VFQKGFSSSFHQIS
Trigger: GGATATTTGATGGAAAGAACTTGAGAATCCCTTCTGGAAAACCCAGCCTTTCAGTGTTAACACCTGCTGCAAGACAGGGATGCTGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 90 bp AACTACAACACAGCAAACACACCAGGTCACCTGCCTCTTACCATTTaGTGTAAAGAACTTGTCTTCCATGTAGATGTCAAAAGGCAAGAA +
Preference number: 1 (lower is better)
Translates to: NYNTANTPGHLPLTI*CKELVFHVDVKRQE
Trigger: TTCTTGCCTTTTGACATCTACATGGAAGACAAGTTCTTTACAGCAAATGGTAAGAGGCAGGTGACCTGGTGTGTTTGCTGTGTTGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 90 bp CTGTACAGATGGTTGCTGGTAGTGTCATTCATTCATTTACATGCTTaGAAATGTGTCAAAAGAGCCCACTACCCAGTTTATGCAGGAACT +
Preference number: 1 (lower is better)
Translates to: LYRWLLVVSFIHLHA*KCVKRAHYPVYAGT
Trigger: AGTTCCTGCATAAACTGGGTAGTGGGCTCTTTTGACACATTTGCAAGCATGTAAATGAATGAATGACACTACCAGCAACCATCTGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 90 bp AAGATGACTCCTATCTTGAAAGAATGTGGGGATAACAAGGCTGGGTaGAACACGGACTGTGACATACATTACCTGATAAATGTGTTAGTA +
Preference number: 1 (lower is better)
Translates to: KMTPILKECGDNKAG*NTDCDIHYLINVLV
Trigger: TACTAACACATTTATCAGGTAATGTATGTCACAGTCCGTGTTCCACCCAGCCTTGTTATCCCCACATTCTTTCAAGATAGGAGTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 90 bp CAGTTATTTCAACAGTGTCTAAACTATCTCATTTCGCTACTGCACTaGATACCAATCAAGAACGGTGGGCAGAAGAGCAATTCTTATTTT +
Preference number: 1 (lower is better)
Translates to: QLFQQCLNYLISLLH*IPIKNGGQKSNSYF
Trigger: AAAATAAGAATTGCTCTTCTGCCCACCGTTCTTGATTGGTATTCAGTGCAGTAGCGAAATGAGATAGTTTAGACACTGTTGAAATAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGCAGGTGGGGGCAGGATaGCATGGAGGCCAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRQVGAG*HGGQVG
Trigger: GCCCACCTGGCCTCCATGCCATCCTGCCCCCACCTG...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 90 bp GCTGGGCACCCCACACTTCCCTATGGAAACAATGCTGGGACTGACTaGAGGCTTCACACAGAGCCGGAGGGCACACATGGAGAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: AGHPTLPYGNNAGTD*RLHTEPEGTHGEPG
Trigger: CCCTGGCTCTCCATGTGTGCCCTCCGGCTCTGTGTGAAGCCTCAAGTCAGTCCCAGCATTGTTTCCATAGGGAAGTGTGGGGTGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGAAGCCAGCAGAGGGGTaGGATCAGAAACAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRKPAEG*DQKQGR
Trigger: CCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGCTT...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAAGCCGGAGGGCACACATaGAGAGCCAGGGCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEAGGHT*RARAAS
Trigger: GCTGGCAGCCCTGGCTCTCCATGTGTGCCCTCCGGC...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAACTGAAGGAGCTCCCCTaGAGCAGGGCTCCGCCAGGA +
Preference number: 2 (lower is better)
Translates to: PSPITNSLSNKSLVPTDELKELP*SRAPPG
Trigger: TCCTGGCGGAGCCCTGCTGCAGGGGAGCTCCTTCAG...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGAGGGCTCCGCCAGGATaGCTCCTCTGCCCACAACCC +
Preference number: 2 (lower is better)
Translates to: AGNAHARANESSLTPSGLRAPPG*LLCPQP
Trigger: GGGTTGTGGGCAGAGGAGCCATCCTGGCGGAGCCCT...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 90 bp TGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTaGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCC +
Preference number: 2 (lower is better)
Translates to: WTAAVASVVGMVWSP*AGQLALSLGRTYVP
Trigger: GGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 90 bp ACACAGGGACTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTaGGTCTCCTTTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: TQGLDSSSCQRGWHG*VSFGRAACSKLGKN
Trigger: GTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGTCCCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 90 bp GCAAAACCAGCCTCTTTCCTGGTCCTAAGTGGCAGAGGCGATGAGTaGCACAGTGACGGTGGTCAGAAAACACAGGGACTGGACAGCAGC +
Preference number: 2 (lower is better)
Translates to: AKPASFLVLSGRGDE*HSDGGQKTQGLDSS
Trigger: GCTGCTGTCCAGTCCCTGTGTTTTCTGACCACCGTCACTGTGCAACTCATCGCCTCTGCCACTTAGGACCAGGAAAGAGGCTGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCATCCCTGTGCTTTACCTaGTGGGCACCCCACACTTCC +
Preference number: 2 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPSLCFT*WAPHTS
Trigger: GGAAGTGTGGGGTGCCCAGCAGGTAAAGCACAGGGA...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGGCAGTGTGGGGCTCCTaGTGCAGCCTAAAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: AGNAHARANESSLTPSGLAVWGS*CSLKVA
Trigger: TGCCACCTTTAGGCTGCAGCAGGAGCCCCACACTGC...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAAAAGCAACGGGGGACTTaGTACTGGACGAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKKQRGT*YWTKGR
Trigger: CCTGCCTTTCGTCCAGTACCAAGTCCCCCGTTGCTT...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAAAGCAACGGGGGACTTaGTACTGGACGAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPKQRGT*YWTKGR
Trigger: CCTGCCTTTCGTCCAGTACCAAGTCCCCCGTTGCTT...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACACAGGTGGGGGCAGGATaGCATGGAGGCCAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATQVGAG*HGGQVG
Trigger: GCCCACCTGGCCTCCATGCCATCCTGCCCCCACCTG...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAAAAGCCCCTTCCTCTCTaGCCTTCCGTTTTTCACCCG +
Preference number: 2 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEKPLPL*PSVFHP
Trigger: CGGGTGAAAAACGGAAGGTCAGAGAGGAAGGGGCTT...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGCACTCTTTTTCAGGGTaGACAGCCCCTGCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGHSFSG*TAPASF
Trigger: GAAGGAAGCAGGGGCTGTCCACCCTGAAAAAGAGTG...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR-3UTR GCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCATTTGGCAGGGCAGCTTaGTCTAAGCTTGGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPFGRAA*SKLGKN
Trigger: GTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAAA...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGCCCCAGGAAATTAAGTaGCTCCAAGTTGCACCTGCC +
Preference number: 2 (lower is better)
Translates to: AGNAHARANESSLTPSGLPQEIK*LQVAPA
Trigger: GGCAGGTGCAACTTGGAGCCACTTAATTTCCTGGGG...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 90 bp GTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCTTGCTCTAAGCTaGGGAAGAACTTACGTCCCCAGGAAATTAAGTGGCTCCAAGTTG +
Preference number: 2 (lower is better)
Translates to: VGMVWSPLAGQLALS*GRTYVPRKLSGSKL
Trigger: CAACTTGGAGCCACTTAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACTACTGGTCAATCATCTaGCAGTTTCAGTCAGCAATG +
Preference number: 2 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYYWSII*QFQSAM
Trigger: CATTGCTGACTGAAACTGGCAGATGATTGACCAGTA...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR-3UTR CCA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACCACTCTTTTTCAGGGTaGACAGCCCCTGCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: GISCKARLPRSTSSTLVYHSFSG*TAPASF
Trigger: GAAGGAAGCAGGGGCTGTCCACCCTGAAAAAGAGTG...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR-3UTR TCA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTAGTCTACAAGTGGGCTaGCCAGAAGCAACGGGGGAC +
Preference number: 2 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPSLQVG*PEATGD
Trigger: GTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACT...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAACAGGGGAAAGCCCACTaGAATCAGCTGTGTTTAACA +
Preference number: 2 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEQGKAH*NQLCLT
Trigger: TGTTAAACACAGCTGATTTCAGTGGGCTTTCCCCTG...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATTCCGGATGGGGCTCCTaGAGGAGCTCCCCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHSGWGS*RSSPAA
Trigger: TGCTGCAGGGGAGCTCCTTCAGGAGCCCCATCCGGA...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAAACATGCCAGAGCAAATaGATCCAGCTTAACCCCTTC +
Preference number: 2 (lower is better)
Translates to: PSPITNSLSNKSLVPTDETCQSK*IQLNPF
Trigger: GAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGT...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAAATGCAAACTGCTTGCTaGGAACACCTACGTCAAGGA +
Preference number: 2 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEMQTAC*EHLRQG
Trigger: TCCTTGACGTAGGTGTTCTCAGCAAGCAGTTTGCAT...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCATATCCAACACACACCTaGACAGCTAGTCTCTCCATT +
Preference number: 2 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPYPTHT*TASLSI
Trigger: AATGGAGAGACTAGCTGTGCAGGTGTGTGTTGGATA...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGGCACCAGCTCCACTTTaGTTTACAGCTGTAACAGAA +
Preference number: 2 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGAPAPL*FTAVTE
Trigger: TTCTGTTACAGCTGTAAACCAAAGTGGAGCTGGTGC...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR-3UTR CCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGGAAAACTGGGCAGTGTaGGGCTCCTGCTGCAGCCTA +
Preference number: 2 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLENWAV*GSCCSL
Trigger: TAGGCTGCAGCAGGAGCCCCACACTGCCCAGTTTTC...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAAGATAACAAGGCTGGGTaGAACACGGACTGTGACATA +
Preference number: 2 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEDNKAG*NTDCDI
Trigger: TATGTCACAGTCCGTGTTCCACCCAGCCTTGTTATC...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTaGGTTTACAGCTGTAACAGAAGCTCCAAGGAATGGCTTCTTGAG +
Preference number: 2 (lower is better)
Translates to: GISCKARLPRSTSST*VYSCNRSSKEWLLE
Trigger: CTCAAGAAGCCATTCCTTGGAGCTTCTGTTACAGCTGTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR CAA 90 bp TCAAAAGAGCCCACTACCCAGTTTATGCAGGAACTCACTCAGGCCTaGTCATACACATATGGTGACCATGAGCAGAGGCTGGTTGGCAAA +
Preference number: 2 (lower is better)
Translates to: SKEPTTQFMQELTQA*SYTYGDHEQRLVGK
Trigger: TTTGCCAACCAGCCTCTGCTCATGGTCACCATATGTGTATGACAAGGCCTGAGTGAGTTCCTGCATAAACTGGGTAGTGGGCTCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCACAGCTATATACACAATaGCACGTATCTGCTGAGCTA +
Preference number: 2 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPQLYTQ*HVSAEL
Trigger: TAGCTCAGCAGATACGTGTCATTGTGTATATAGCTG...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAATACTGGTCAATCATCTaGCAGTTTCAGTCAGCAATG +
Preference number: 2 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKYWSII*QFQSAM
Trigger: CATTGCTGACTGAAACTGGCAGATGATTGACCAGTA...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATAACCCAGTCAGTGTCTaGTCCCCCAGGGCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHNPVSV*SPRARG
Trigger: TCCCCTGGCCCTGGGGGAGCAGACACTGACTGGGTT...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACACTGTGCTTTACCTGCTaGGCACCCCACACTTCCCTA +
Preference number: 2 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATLCFTC*APHTSL
Trigger: TAGGGAAGTGTGGGGTGCCCAGCAGGTAAAGCACAG...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCACTTTCATGGGTGATGTaGTACTGGACATTAACATAC +
Preference number: 2 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPLSWVM*YWTLTY
Trigger: GTATGTTAATGTCCAGTATCACATCACCCATGAAAG...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGCTACAGCAAGATGGCTaGTTACCGAAATACTGGAAA +
Preference number: 2 (lower is better)
Translates to: AGNAHARANESSLTPSGLLQQDG*LPKYWK
Trigger: TTTCCAGTATTTCGGTAATCAGCCATCTTGCTGTAG...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAAACACAAATACATATGTaGACGTGTCGTGACTGGTTT +
Preference number: 2 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKTQIHM*TCRDWF
Trigger: AAACCAGTCACGACACGTCCACATATGTATTTGTGT...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTTCCACGCCACACCTATaGGTTCCCCCTTCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLSTPHL*VPPSFF
Trigger: GAAGAAGGAAGGGGGAACCCATAGGTGTGGCGTGGA...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAATACTTCAAGGTACAGTaGACTGAGGGGTTAGAATCA +
Preference number: 2 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEYFKVQ*TEGLES
Trigger: TGATTCTAACCCCTCAGTCCACTGTACCTTGAAGTA...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAATTAACACTGAAAGGCTaGGTTTTCCAGAAGGGATTC +
Preference number: 2 (lower is better)
Translates to: PSPITNSLSNKSLVPTDELTLKG*VFQKGF
Trigger: GAATCCCTTCTGGAAAACCCAGCCTTTCAGTGTTAA...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTAGTCTACAAGTGGGCTaGCCAGAAGCAACGGGGGAC +
Preference number: 2 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSSLQVG*PEATGD
Trigger: GTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACT...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGAAGGCAGGTATCTCCTaGACTGCCCACGACTTTCAT +
Preference number: 2 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLKAGIS*TAHDFH
Trigger: ATGAAAGTCGTGGGCAGTTCAGGAGATACCTGCCTT...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAAGATTATGAGGCAAAATaGGAGAGAAATCTACCACCA +
Preference number: 2 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEDYEAK*ERNLPP
Trigger: TGGTGGTAGATTTCTCTCTCATTTTGCCTCATAATC...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATCCAGGATGGCTCCTCTaGCCACAACCCAGTCAGTGT +
Preference number: 2 (lower is better)
Translates to: GGFISELSKLVLDLKSGNPGWLL*PQPSQC
Trigger: ACACTGACTGGGTTGTGGGCAGAGGAGCCATCCTGG...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACATCTTTCTGGACAAGATaGGCTCCCTACTCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATSFWTR*APYSPF
Trigger: GAAGGGAGAGTAGGGAGCCCATCTTGTCCAGAAAGA...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTACTTTCATGGGTGATGTaGTACTGGACATTAACATAC +
Preference number: 2 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLLSWVM*YWTLTY
Trigger: GTATGTTAATGTCCAGTATCACATCACCCATGAAAG...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAAACAAAGAACAAAGATaGAGGCAGGTATCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLNKEQR*RQVSPE
Trigger: TTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTT...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGCACTTGTGGAGTGTATaGAGCAGTAAGGGAGTAAGG +
Preference number: 2 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLHLWSV*SSKGVR
Trigger: CCTTACTCCCTTACTGCTTCATACACTCCACAAGTG...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTTTTTGTTGGTTTCACTaGGTGGCTGGAGCACTCACT +
Preference number: 2 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPFCWFH*VAGALT
Trigger: AGTGAGTGCTCCAGCCACTCAGTGAAACCAACAAAA...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTAGGTATCTCCTGAACTaGCCACGACTTTCATGGGTG +
Preference number: 2 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLRYLLN*PRLSWV
Trigger: CACCCATGAAAGTCGTGGGCAGTTCAGGAGATACCT...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATTGGGAAAGGGTTACCTaGTTCAAGCCAGCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: GGFISELSKLVLDLKSGNWERVT*FKPAEG
Trigger: CCCCTCTGCTGGCTTGAAGCAGGTAACCCTTTCCCA...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCATTGGTTAAAGCTCAATaGAGTTATTTCAACAGTGTC +
Preference number: 2 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPLVKAQ*SYFNSV
Trigger: GACACTGTTGAAATAACTGCATTGAGCTTTAACCAA...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATCAGCAGTTGCCAGCGTaGTTGGCATGGTTTGGTCTC +
Preference number: 2 (lower is better)
Translates to: GGFISELSKLVLDLKSGNQQLPA*LAWFGL
Trigger: GAGACCAAACCATGCCAACCACGCTGGCAACTGCTG...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTTCTTTCTGGACAAGATaGGCTCCCTACTCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLSFWTR*APYSPF
Trigger: GAAGGGAGAGTAGGGAGCCCATCTTGTCCAGAAAGA...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAAGTTGGGCAAAAATTTaGTGGTCAAGTATTTTCTCT +
Preference number: 2 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPSWAKI*WSSIFS
Trigger: AGAGAAAATACTTGACCACCAAATTTTTGCCCAACT...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATGGCATAATGTTGCCATaGCACCAGAGAGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GGFISELSKLVLDLKSGNGIMLP*HQREAR
Trigger: CCTGGCCTCTCTCTGGTGCCATGGCAACATTATGCC...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 90 bp CCACTTTGGTTTACAGCTGTAACAGAAGCTCCAAGGAATGGCTTCTaGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTT +
Preference number: 2 (lower is better)
Translates to: PLWFTAVTEAPRNGF*RSPIDKSQMSSVTL
Trigger: AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTGGAGCTTCTGTTACAGCTGTAAACCAAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR-3UTR TCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACACAAGGAATGGCTTCTTaGGAAGTCCCATCGACAAAA +
Preference number: 2 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATQGMAS*EVPSTK
Trigger: TTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTG...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTCTGGAAGTCTACAAGTaGGCTGACCAGAAGCAACGG +
Preference number: 2 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSLEVYK*ADQKQR
Trigger: CCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAG...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATCTGGAAGTCTACAAGTaGGCTGACCAGAAGCAACGG +
Preference number: 2 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDLEVYK*ADQKQR
Trigger: CCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAG...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR-3UTR CCA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGAACACAAATACATATGTaGACGTGTCGTGACTGGTTT +
Preference number: 2 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRTQIHM*TCRDWF
Trigger: AAACCAGTCACGACACGTCCACATATGTATTTGTGT...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTCTTTCTTCACCCTGCTaGGAATGCACATGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSLSSPC*ECTCQS
Trigger: GCTCTGGCATGTGCATTCCCAGCAGGGTGAAGAAAG...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTACCAATCAAGAACGGTaGGCAGAAGAGCAATTCTTA +
Preference number: 2 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPTNQER*AEEQFL
Trigger: TAAGAATTGCTCTTCTGCCCACCGTTCTTGATTGGT...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR TCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGGATTATGAGGCAAAATaGGAGAGAAATCTACCACCA +
Preference number: 2 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLDYEAK*ERNLPP
Trigger: TGGTGGTAGATTTCTCTCTCATTTTGCCTCATAATC...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACACTGCCTCTTACCATTTaGTGTAAAGAACTTGTCTTC +
Preference number: 2 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATLPLTI*CKELVF
Trigger: GAAGACAAGTTCTTTACAGCAAATGGTAAGAGGCAG...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAAAAAGACACCCCTCTaGCATAGATATATATCTCTC +
Preference number: 2 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDKKTPL*HRYISL
Trigger: GAGAGATATATATCTATGCCAGAGGGGTGTCTTTTT...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR-3UTR CCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTATGGTCAAAGGATACTaGTCAATCATCTGCCAGTTT +
Preference number: 2 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSMVKGY*SIICQF
Trigger: AAACTGGCAGATGATTGACCAGTATCCTTTGACCAT...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR-3UTR TCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATCAGACAGACCACAGATaGATCTTTCTGGACAAGATG +
Preference number: 2 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHQTDHR*IFLDKM
Trigger: CATCTTGTCCAGAAAGATTCATCTGTGGTCTGTCTG...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTAAAAAGACACCCCTCTaGCATAGATATATATCTCTC +
Preference number: 2 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSKKTPL*HRYISL
Trigger: GAGAGATATATATCTATGCCAGAGGGGTGTCTTTTT...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR-3UTR CCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTACAGATGAATCTTTCTaGACAAGATGGGCTCCCTAC +
Preference number: 2 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSTDESF*TRWAPY
Trigger: GTAGGGAGCCCATCTTGTCCAGAAAGATTCATCTGT...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTTTGAATAGTACATCTTaGCTCCACGCCACACCTATG +
Preference number: 2 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSLNSTS*LHATPM
Trigger: CATAGGTGTGGCGTGGAGCCAAGATGTACTATTCAA...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTAGAACAAAAGCACCATaGTTCCATGGTATGTGTTTT +
Preference number: 2 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPRTKAP*FHGMCF
Trigger: AAAACACATACCATGGAACCATGGTGCTTTTGTTCT...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTATGTACATACACTTATaGCACTTGGAACTGCACTGT +
Preference number: 2 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLMYIHL*HLELHC
Trigger: ACAGTGCAGTTCCAAGTGCCATAAGTGTATGTACAT...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR GCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATTACTGGTCAATCATCTaGCAGTTTCAGTCAGCAATG +
Preference number: 2 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHYWSII*QFQSAM
Trigger: CATTGCTGACTGAAACTGGCAGATGATTGACCAGTA...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAAAAAAGACACCCCTCTaGCATAGATATATATCTCTC +
Preference number: 2 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEKKTPL*HRYISL
Trigger: GAGAGATATATATCTATGCCAGAGGGGTGTCTTTTT...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR-3UTR CCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATAAAAAGACACCCCTCTaGCATAGATATATATCTCTC +
Preference number: 2 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDKKTPL*HRYISL
Trigger: GAGAGATATATATCTATGCCAGAGGGGTGTCTTTTT...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR GCA 72 bp CTCCCCTGCAGCAGGGCTCCGCCAGGATGGCTCCTCTaGCCACAACCCAGTCAGTGTCTGCTCCCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: LPCSRAPPGWLL*PQPSQCLLPQG
Trigger: GCCCTGGGGGAGCAGACACTGACTGGGTTGTGGGCAGAGGAGCCATCCTGGCGGAGCCCTGCTGCAGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 72 bp AAGGCAGCCCAGTGCAAGAGGTCCGGATGGGGCTCCTaGAGGAGCTCCCCTGCAGCAGGGCTCCGCCAGGAT +
Preference number: 3 (lower is better)
Translates to: KAAQCKRSGWGS*RSSPAAGLRQD
Trigger: ATCCTGGCGGAGCCCTGCTGCAGGGGAGCTCCTTCAGGAGCCCCATCCGGACCTCTTGCACTGGGCTGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 72 bp CCAGGCCAGGGACTCCGGCTTGAGATCCCCACAGGATaGGGCTGTGGACAGCCCCTCTCACTCCAACCAGGG +
Preference number: 3 (lower is better)
Translates to: PGQGLRLEIPTG*GCGQPLSLQPG
Trigger: CCCTGGTTGGAGTGAGAGGGGCTGTCCACAGCCCCATCCTGTGGGGATCTCAAGCCGGAGTCCCTGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 72 bp ACACAGGGACTGGACAGCAGCAGTTGCCAGCGTGGTTaGCATGGTTTGGTCTCCTTTGGCAGGGCAGCTTGC +
Preference number: 3 (lower is better)
Translates to: TQGLDSSSCQRG*HGLVSFGRAAC
Trigger: GCAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGTCCCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 72 bp GAAAACACAGGGACTGGACAGCAGCAGTTGCCAGCGTaGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGC +
Preference number: 3 (lower is better)
Translates to: ENTGTGQQQLPA*LAWFGLLWQGS
Trigger: GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGTCCCTGTGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAACTGGACAGCAGCAGTaGCCAGCGTGGTTGGCATGG +
Preference number: 3 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPTGQQQ*PAWLAW
Trigger: CCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGT...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 72 bp TGGCATTCCCACTGCCCTCTCTCCCTGTGCTTTACCTaGTGGGCACCCCACACTTCCCTATGGAAACAATGC +
Preference number: 3 (lower is better)
Translates to: WHSHCPLSLCFT*WAPHTSLWKQC
Trigger: GCATTGTTTCCATAGGGAAGTGTGGGGTGCCCAGCAGGTAAAGCACAGGGAGAGAGGGCAGTGGGAATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 72 bp GGTGGTCAGAAAACACAGGGACTGGACAGCAGCAGTTaGCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGC +
Preference number: 3 (lower is better)
Translates to: GGQKTQGLDSSS*QRGWHGLVSFG
Trigger: GCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGTCCCTGTGTTTTCTGACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 72 bp TGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTaGTCTCCTTTGGCAGGGCAGCTTGCTCTAAGCTTG +
Preference number: 3 (lower is better)
Translates to: WTAAVASVVGMV*SPLAGQLALSL
Trigger: CAAGCTTAGAGCAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 72 bp TGGACAGCCCCTCTCACTCCAACCAGGGAAGAAGTTTaGGGCATAATGTTGCCATGGCACCAGAGAGAGGCC +
Preference number: 3 (lower is better)
Translates to: WTAPLTPTREEV*GIMLPWHQREA
Trigger: GGCCTCTCTCTGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGGGCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 72 bp CCACACTTCCCTATGGAAACAATGCTGGGACTGACTTaGGGCTTCACACAGAGCCGGAGGGCACACATGGAG +
Preference number: 3 (lower is better)
Translates to: PHFPMETMLGLT*GFTQSRRAHME
Trigger: CTCCATGTGTGCCCTCCGGCTCTGTGTGAAGCCTCAAGTCAGTCCCAGCATTGTTTCCATAGGGAAGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 72 bp AAGTGTGAGAAAGACGGTGGGATGCAAACTGCTTGCTaGGAACACCTACGTCAAGGAGGCCAGGCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: KCEKDGGMQTAC*EHLRQGGQARD
Trigger: GTCCCTGGCCTGGCCTCCTTGACGTAGGTGTTCTCAGCAAGCAGTTTGCATCCCACCGTCTTTCTCACACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 72 bp AGTTGCACAGTGACGGTGGTCAGAAAACACAGGGACTaGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTT +
Preference number: 3 (lower is better)
Translates to: SCTVTVVRKHRD*TAAVASVVGMV
Trigger: AACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGTCCCTGTGTTTTCTGACCACCGTCACTGTGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 72 bp GGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCTTaGTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAA +
Preference number: 3 (lower is better)
Translates to: GWHGLVSFGRAA*SKLGKNLRPQE
Trigger: TTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGCAGTTGCCAGCGTGGTaGGCATGGTTTGGTCTCCTT +
Preference number: 3 (lower is better)
Translates to: AGNAHARANESSLTPSGLQLPAW*AWFGLL
Trigger: AAGGAGACCAAACCATGCCAACCACGCTGGCAACTG...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGCCAAGGAATGGCTTCTaGAGAAGTCCCATCGACAAA +
Preference number: 3 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGPRNGF*RSPIDK
Trigger: TTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTGG...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR TCA 72 bp TGCAGATCAGATGCCCAAGTCCCATCACTAACTCCCTaGGCAACAAGTCTCTGGTCCCCACAGATGAAGCTT +
Preference number: 3 (lower is better)
Translates to: CRSDAQVPSLTP*ATSLWSPQMKL
Trigger: AAGCTTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGGGCATCTGATCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 72 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTaGGCTGACCAGAAGCAACGGGGGACTTGGTACTGG +
Preference number: 3 (lower is better)
Translates to: NRIKMCPLEVYK*ADQKQRGTWYW
Trigger: CCAGTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR CCA 72 bp AAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAAGTaGCTCCAAGTTGCACCTGCCAATCCCAGAGTCACA +
Preference number: 3 (lower is better)
Translates to: KLGKNLRPQEIK*LQVAPANPRVT
Trigger: TGTGACTCTGGGATTGGCAGGTGCAACTTGGAGCCACTTAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 72 bp ACCAAGGACTCACTTTTGTTGGTTTCACTGAGTGGCTaGAGCACTCACTCAGTACGTAGGTTGGAGTGGCAA +
Preference number: 3 (lower is better)
Translates to: TKDSLLLVSLSG*STHSVRRLEWQ
Trigger: TTGCCACTCCAACCTACGTACTGAGTGAGTGCTCCAGCCACTCAGTGAAACCAACAAAAGTGAGTCCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACCCAAGGAATGGCTTCTaGAGAAGTCCCATCGACAAA +
Preference number: 3 (lower is better)
Translates to: GISCKARLPRSTSSTLVYPRNGF*RSPIDK
Trigger: TTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTGG...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR-3UTR CAA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTCGTGGTTGGCATGGTTaGGTCTCCTTTGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLRGWHG*VSFGRA
Trigger: TGCCCTGCCAAAGGAGACCAAACCATGCCAACCACG...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTCAGCTTGCTCTAAGCTaGGGAAGAACTTACGTCCCC +
Preference number: 3 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPQLALS*GRTYVP
Trigger: GGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTG...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAAAGATGACTCCTATCTaGAAAGAATGTGGGGATAAC +
Preference number: 3 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPKMTPI*KECGDN
Trigger: GTTATCCCCACATTCTTTCAAGATAGGAGTCATCTT...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATGAAGCAACGGGGGACTaGGTACTGGACGAAAGGCAG +
Preference number: 3 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHEATGD*VLDERQ
Trigger: CTGCCTTTCGTCCAGTACCAAGTCCCCCGTTGCTTC...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTAAGAGTTTAATGGACTaGCCTGCAGGACAGCAGGCT +
Preference number: 3 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPKSLMD*PAGQQA
Trigger: AGCCTGCTGTCCTGCAGGCAAGTCCATTAAACTCTT...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 72 bp AGTGGCTGGAGCACTCACTCAGTACGTAGGTTGGAGTaGCAAGGTAATCAATTTCTGTCAGTCCAATATGCT +
Preference number: 3 (lower is better)
Translates to: SGWSTHSVRRLE*QGNQFLSVQYA
Trigger: AGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTGAGTGAGTGCTCCAGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGCCAAGGAATGGCTTCTaGAGAAGTCCCATCGACAAA +
Preference number: 3 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLPRNGF*RSPIDK
Trigger: TTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTGG...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 72 bp GAGAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTaGAAGAAGAGATCCTGCCTCCCAATGAACTCTCAC +
Preference number: 3 (lower is better)
Translates to: EKLSKGQGVNPK*KKRSCLPMNSH
Trigger: GTGAGAGTTCATTGGGAGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 72 bp ATCCCTGTCTTGCAGCAGGTGTTAACACTGAAAGGCTaGGTTTTCCAGAAGGGATTCTCAAGTTCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: IPVLQQVLTLKG*VFQKGFSSSFH
Trigger: ATGGAAAGAACTTGAGAATCCCTTCTGGAAAACCCAGCCTTTCAGTGTTAACACCTGCTGCAAGACAGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGCTTCTGGACTGGTCATaGAAGATAGGGTTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLLLDWS*KIGLEE
Trigger: TTCTTCCAACCCTATCTTCAATGACCAGTCCAGAAG...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTACCAAGGACTCACTTTaGTTGGTTTCACTGAGTGGC +
Preference number: 3 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLTKDSL*LVSLSG
Trigger: GCCACTCAGTGAAACCAACAAAAGTGAGTCCTTGGT...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 72 bp TTGCAAATGTGTCAAAAGAGCCCACTACCCAGTTTATaGAGGAACTCACTCAGGCCTTGTCATACACATATG +
Preference number: 3 (lower is better)
Translates to: LQMCQKSPLPSL*RNSLRPCHTHM
Trigger: CATATGTGTATGACAAGGCCTGAGTGAGTTCCTGCATAAACTGGGTAGTGGGCTCTTTTGACACATTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 72 bp CAACAGTGTCTAAACTATCTCATTTCGCTACTGCACTaGATACCAATCAAGAACGGTGGGCAGAAGAGCAAT +
Preference number: 3 (lower is better)
Translates to: QQCLNYLISLLH*IPIKNGGQKSN
Trigger: ATTGCTCTTCTGCCCACCGTTCTTGATTGGTATTCAGTGCAGTAGCGAAATGAGATAGTTTAGACACTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR GCA 72 bp CAGATGGTTGCTGGTAGTGTCATTCATTCATTTACATaGTTGCAAATGTGTCAAAAGAGCCCACTACCCAGT +
Preference number: 3 (lower is better)
Translates to: QMVAGSVIHSFT*LQMCQKSPLPS
Trigger: ACTGGGTAGTGGGCTCTTTTGACACATTTGCAAGCATGTAAATGAATGAATGACACTACCAGCAACCATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CCA 72 bp ACTTTGGTTTACAGCTGTAACAGAAGCTCCAAGGAATaGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGAT +
Preference number: 3 (lower is better)
Translates to: TLVYSCNRSSKE*LLEKSHRQKSD
Trigger: ATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTGGAGCTTCTGTTACAGCTGTAAACCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR CCA 72 bp CCTATCTTGAAAGAATGTGGGGATAACAAGGCTGGGTaGAACACGGACTGTGACATACATTACCTGATAAAT +
Preference number: 3 (lower is better)
Translates to: PILKECGDNKAG*NTDCDIHYLIN
Trigger: ATTTATCAGGTAATGTATGTCACAGTCCGTGTTCCACCCAGCCTTGTTATCCCCACATTCTTTCAAGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATCCAAGGAATGGCTTCTaGAGAAGTCCCATCGACAAA +
Preference number: 3 (lower is better)
Translates to: GGFISELSKLVLDLKSGNPRNGF*RSPIDK
Trigger: TTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTGG...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 72 bp ACACACTCAGCTATATACACAATGACACGTATCTGCTaGGCTACACACCTGCTACAGATAACACAGATGTTA +
Preference number: 3 (lower is better)
Translates to: THSAIYTMTRIC*ATHLLQITQML
Trigger: TAACATCTGTGTTATCTGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR-3UTR CAA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTATACACTTATGGCACTaGGAACTGCACTGTATCCAT +
Preference number: 3 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSIHLWH*ELHCIH
Trigger: ATGGATACAGTGCAGTTCCAAGTGCCATAAGTGTAT...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 72 bp TCCCCAAAGCTTAAAGTAAGTGTCTTTCTTCCACTATaGCAAGGACAAAACGCTGATGTTTGTAAGCTGAGA +
Preference number: 3 (lower is better)
Translates to: SPKLKVSVFLPL*QGQNADVCKLR
Trigger: TCTCAGCTTACAAACATCAGCGTTTTGTCCTTGTCATAGTGGAAGAAAGACACTTACTTTAAGCTTTGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 72 bp TCCCCCTTCCTTCTTCTCCAGCATGTCTTTTCAAGCTaGAGGCTAGTAATTGAAGAATGTTGTTTACTTTTT +
Preference number: 3 (lower is better)
Translates to: SPFLLLQHVFSS*RLVIEECCLLF
Trigger: AAAAAGTAAACAACATTCTTCAATTACTAGCCTTCAGCTTGAAAAGACATGCTGGAGAAGAAGGAAGGGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR TCA 72 bp ACATATAAGGCAAATGAAATCCTGTCTACTATAATGTaGACATACATTCTACCAGCCTTAGGGCGAAGTTTA +
Preference number: 3 (lower is better)
Translates to: TYKANEILSTIM*TYILPALGRSL
Trigger: TAAACTTCGCCCTAAGGCTGGTAGAATGTATGTTCACATTATAGTAGACAGGATTTCATTTGCCTTATATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACCCCGGCTCTGCGGCCTaGGCTGGGCTCCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYPGSAA*AGLLER
Trigger: CCTCTCCAGGAGCCCAGCGCAGGCCGCAGAGCCGGG...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCTCCGGATGGGGCTCCTaGAGGAGCTCCCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSSGWGS*RSSPAA
Trigger: TGCTGCAGGGGAGCTCCTTCAGGAGCCCCATCCGGA...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCCCAGGGACTCCGGCTTaGGATCCCCACAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSPGTPA*DPHRMG
Trigger: CCCCATCCTGTGGGGATCTCAAGCCGGAGTCCCTGG...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCCGGAGGGCACACATaGAGAGCCAGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRAGGHT*RARAAS
Trigger: GCTGGCAGCCCTGGCTCTCCATGTGTGCCCTCCGGC...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCCAACTCGTTGTGGCTTaGGTCCCTGCGCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSQLVVA*VPAPSS
Trigger: GCTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTG...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCGCAAAGGCAGCCCAGTaGAAGAGGTCCGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSAKAAQ*KRSGWG
Trigger: GCCCCATCCGGACCTCTTGCACTGGGCTGCCTTTGC...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACGGGACTCGCCATCGGTaGAGCGGACCACCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYGTRHR*SGPPAA
Trigger: CGCTGCAGGTGGTCCGCTCCACCGATGGCGAGTCCC...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACGCTCCGAGGTGCCTGTaGTGGCCGTGGTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYAPRCL*WPWWSL
Trigger: GAGAGACCACCACGGCCATCACAGGCACCTCGGAGC...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACTGGGCTGCAGCTGCCTaGGCTCCAGCAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYWAAAA*APAGRW
Trigger: CCATCGTCCTGCTGGAGCTCAGGCAGCTGCAGCCCA...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGCCCGGCTCTGCGGCCTaGGCTGGGCTCCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AGNAHARANESSLTPSGLPGSAA*AGLLER
Trigger: CCTCTCCAGGAGCCCAGCGCAGGCCGCAGAGCCGGG...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACAGGGCTCCGCCAGGATaGCTCCTCTGCCCACAACCC +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYRAPPG*LLCPQP
Trigger: GGGTTGTGGGCAGAGGAGCCATCCTGGCGGAGCCCT...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCTCAGCCTGGAGACGCTaGATGTGGATGAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSSAWRR*MWMKAS
Trigger: AGAGGCCTTCATCCACATTCAGCGTCTCCAGGCTGA...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAACCAGGGACTCCGGCTTaGGATCCCCACAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKPGTPA*DPHRMG
Trigger: CCCCATCCTGTGGGGATCTCAAGCCGGAGTCCCTGG...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCCTGAAGGAGCTCCCCTaGAGCAGGGCTCCGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NGGLGTGRKAGISCKARLLKELP*SRAPPG
Trigger: TCCTGGCGGAGCCCTGCTGCAGGGGAGCTCCTTCAG...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGGGACTCGCCATCGGTaGAGCGGACCACCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLGTRHR*SGPPAA
Trigger: CGCTGCAGGTGGTCCGCTCCACCGATGGCGAGTCCC...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGGCCGGAGGGCACACATaGAGAGCCAGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGNAHARANESSLTPSGLAGGHT*RARAAS
Trigger: GCTGGCAGCCCTGGCTCTCCATGTGTGCCCTCCGGC...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAAGGACCACCTGCAGCGTaGACATGGGCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEGPPAA*TWAAAA
Trigger: GGCAGCTGCAGCCCATGTTCACGCTGCAGGTGGTCC...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGCAACTCGTTGTGGCTTaGGTCCCTGCGCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGQLVVA*VPAPSS
Trigger: GCTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTG...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGGGGTGGGGCCCGCACTaGGGTACCGTTCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGNAHARANESSLTPSGLGWGPH*GTVLGR
Trigger: CCTTCCTAGAACGGTACCTCAGTGCGGGCCCCACCC...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACAGTCTACAAGTGGGCTaGCCAGAAGCAACGGGGGAC +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYSLQVG*PEATGD
Trigger: GTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACT...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGAAGCCCCTTCCTCTCTaGCCTTCCGTTTTTCACCCG +
Preference number: 4 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRKPLPL*PSVFHP
Trigger: CGGGTGAAAAACGGAAGGTCAGAGAGGAAGGGGCTT...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGATCCTGCCTCCCAATaGACTCTCACCCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRDPASQ*TLTPGS
Trigger: AGAACCTGGGGTGAGAGTTCATTGGGAGGCAGGATC...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCGGGACTCGCCATCGGTaGAGCGGACCACCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPGTRHR*SGPPAA
Trigger: CGCTGCAGGTGGTCCGCTCCACCGATGGCGAGTCCC...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACGCCCGGCCATATGCTTaGCTGCTCGGAATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYARPYA*LLGIWR
Trigger: CCTCCAAATTCCGAGCAGCCAAGCATATGGCCGGGC...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGCAGCAGTTGCCAGCGTaGTTGGCATGGTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRQQLPA*LAWFGL
Trigger: GAGACCAAACCATGCCAACCACGCTGGCAACTGCTG...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCCTTTCTTCACCCTGCTaGGAATGCACATGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSLSSPC*ECTCQS
Trigger: GCTCTGGCATGTGCATTCCCAGCAGGGTGAAGAAAG...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAAGAGATCCCCACAGGATaGGGCTGTGGACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKEIPTG*GCGQPL
Trigger: GAGGGGCTGTCCACAGCCCCATCCTGTGGGGATCTC...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 72 bp AACACAGGGACTGGACAGCAGCAGTTGCCAGCGTGGTaGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: NTGTGQQQLPAW*AWFGLLWQGSL
Trigger: CAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGTCCCTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGGAAAAGAGGCGACGGTaGGGCCCAGGTAGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGEKRRR*GPGSVC
Trigger: GCAAACGCTACCTGGGCCTCACCGTCGCCTCTTTTC...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACTGTCCTCTTGGGATATaGTGTGCTCCGAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYCPLGI*CAPRCL
Trigger: CAGGCACCTCGGAGCACAGCATATCCCAAGAGGACA...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGGGCCCAGGTAGCGTTTaGAATCCAGCCCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGGPGSV*NPAPRC
Trigger: ACAGCGTGGGGCTGGATTGCAAACGCTACCTGGGCC...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTGGAGCGGACCACCTaGAGCGTGAACATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLVERTT*SVNMGC
Trigger: GCAGCCCATGTTCACGCTGCAGGTGGTCCGCTCCAC...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGTGTGGCTTGAGTCCCTaGGCCGAGCAGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGCGLSP*AEQLQQ
Trigger: TTGCTGCAGCTGCTCGGCGCAGGGACTCAAGCCACA...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGAGGTCAAGCCCCTGCCTaGCTCCCTGCACCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRGQAPA*LPAPKA
Trigger: GGCCTTGGGTGCAGGGAGGCAGGCAGGGGCTTGACC...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACACCAATGCTGCTCGCTaGATACTCAGGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYTNAAR*ILRCPR
Trigger: CCTGGGACACCTGAGTATCCAGCGAGCAGCATTGGT...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACACTTCTGGAGAGCCCTaGCCATGGAGGGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYTSGEP*PWRGKW
Trigger: CCATTTTCCCCTCCATGGCCAGGGCTCTCCAGAAGT...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCGTTTCACTGAGTGGCTaGAGCACTCACTCAGTACGT +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSVSLSG*STHSVR
Trigger: ACGTACTGAGTGAGTGCTCCAGCCACTCAGTGAAAC...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 72 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTaGGTCTCCTTTGGCAGGGCAGCTTGCTCTAAGCTT +
Preference number: 4 (lower is better)
Translates to: LDSSSCQRGWHG*VSFGRAACSKL
Trigger: AAGCTTAGAGCAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 72 bp CGGTGGTCAGAAAACACAGGGACTGGACAGCAGCAGTaGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: RWSENTGTGQQQ*PAWLAWFGLLW
Trigger: CCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGTCCCTGTGTTTTCTGACCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 72 bp CTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTaGCCATGGCACCAGAGAGAGGCCAGGTCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: LTPTREEVWGIM*PWHQREARSSP
Trigger: GGGGCTTGACCTGGCCTCTCTCTGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACGACGCTGAATGTGGATaGAGGCCTCTTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYDAECG*RPLPLQ
Trigger: TTGCAGTGGAAGAGGCCTTCATCCACATTCAGCGTC...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCAGTTCTGCTGCCGGGTaGTGCGCAGGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NGGLGTGRKAGISCKARLSSAAG*CAGTSG
Trigger: TCCAGAAGTACCTGCGCATCACCCGGCAGCAGAACT...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACTCTTGGGATATGCTGTaGTCCGAGGTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYSWDML*SEVPVM
Trigger: CATCACAGGCACCTCGGAGCACAGCATATCCCAAGA...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGAGGTATCTCCTGAACTaGCCACGACTTTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRRYLLN*PRLSWV
Trigger: CACCCATGAAAGTCGTGGGCAGTTCAGGAGATACCT...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGCACCTGCAGATCAGATaGCCAAGTCCCATCACTAAC +
Preference number: 4 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRHLQIR*PSPITN
Trigger: GTTAGTGATGGGACTTGGGCATCTGATCTGCAGGTG...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACCCCCACCCTCATCTTTaGTGGCATCCTGCACTCTAT +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYPHPHL*WHPALY
Trigger: ATAGAGTGCAGGATGCCAGCAAAGATGAGGGTGGGG...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGGCCCGGCCATATGCTTaGCTGCTCGGAATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGARPYA*LLGIWR
Trigger: CCTCCAAATTCCGAGCAGCCAAGCATATGGCCGGGC...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGATGCGCAGGTACTTCTaGAGAGCCCTGGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGMRRYF*RALAME
Trigger: CTCCATGGCCAGGGCTCTCCAGAAGTACCTGCGCAT...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAGAAAACTGGGCAGTGTaGGGCTCCTGCTGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPENWAV*GSCCSL
Trigger: TAGGCTGCAGCAGGAGCCCCACACTGCCCAGTTTTC...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 72 bp GCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTaGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: AVASVVGMVWSP*AGQLALSLGRT
Trigger: AGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 72 bp GCCTCTTTCCTGGTCCTAAGTGGCAGAGGCGATGAGTaGCACAGTGACGGTGGTCAGAAAACACAGGGACTG +
Preference number: 4 (lower is better)
Translates to: ASFLVLSGRGDE*HSDGGQKTQGL
Trigger: CAGTCCCTGTGTTTTCTGACCACCGTCACTGTGCAACTCATCGCCTCTGCCACTTAGGACCAGGAAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACTGGGAGGTTGAATGGTaGCAGACTTTTCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYWEVEW*QTFLTL
Trigger: GAGGGTCAGAAAAGTCTGTCACCATTCAACCTCCCA...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACTGGGCTGCAGCTGCCTaGGCTCCAGCAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDWAAAA*APAGRW
Trigger: CCATCGTCCTGCTGGAGCTCAGGCAGCTGCAGCCCA...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGTCAGCCTGGAGACGCTaGATGTGGATGAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGSAWRR*MWMKAS
Trigger: AGAGGCCTTCATCCACATTCAGCGTCTCCAGGCTGA...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAAAGTTCTGCTGCCGGGTaGTGCGCAGGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PSPITNSLSNKSLVPTDESSAAG*CAGTSG
Trigger: TCCAGAAGTACCTGCGCATCACCCGGCAGCAGAACT...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGAGTCTACAAGTGGGCTaGCCAGAAGCAACGGGGGAC +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLSLQVG*PEATGD
Trigger: GTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACT...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGTGTCCTCTTGGGATATaGTGTGCTCCGAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGCPLGI*CAPRCL
Trigger: CAGGCACCTCGGAGCACAGCATATCCCAAGAGGACA...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCATGTCCTCTTGGGATATaGTGTGCTCCGAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPCPLGI*CAPRCL
Trigger: CAGGCACCTCGGAGCACAGCATATCCCAAGAGGACA...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACCGGTCCTTGTCATATTaGAGGGTGGGGCCCGCACTG +
Preference number: 4 (lower is better)
Translates to: GISCKARLPRSTSSTLVYRSLSY*RVGPAL
Trigger: CAGTGCGGGCCCCACCCTGCAATATGACAAGGACCG...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGAAACCCAGTCAGTGTCTaGTCCCCCAGGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRNPVSV*SPRARG
Trigger: TCCCCTGGCCCTGGGGGAGCAGACACTGACTGGGTT...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACAGCCCGTCTCACACTTaGCATCTCTTACCCCATTTC +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYSPSHT*HLLPHF
Trigger: GAAATGGGGTAAGAGATGGCAAGTGTGAGACGGGCT...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCACTAAACTTGTCACCTaGAGATCAGATGCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSTKLVT*RSDAQV
Trigger: GACTTGGGCATCTGATCTGCAGGTGACAAGTTTAGT...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGCTCTCAAATAAGACCTaGCTGGCCCAGGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGLSNKT*LAQASL
Trigger: CAGAGAGGCCTGGGCCAGGCAGGTCTTATTTGAGAG...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACCAATGCTGCTCGCTaGATACTCAGGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGTNAAR*ILRCPR
Trigger: CCTGGGACACCTGAGTATCCAGCGAGCAGCATTGGT...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCCAGTGGCATTGTTACTaGGGCCATCTACATTGTAGA +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSQWHCY*GHLHCR
Trigger: TCTACAATGTAGATGGCCCCAGTAACAATGCCACTG...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCCCCGGGACTGGCCAGTaGCATTGTTACTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPPGTGQ*HCYWGH
Trigger: ATGGCCCCAGTAACAATGCCACTGGCCAGTCCCGGG...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACGAGGGGAAAATGGCCTaGGCGGCCTCCCTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDEGKMA*AASLGS
Trigger: GGACCCTAGGGAGGCCGCCCAGGCCATTTTCCCCTC...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCGTGGTTGGCATGGTTTaGTCTCCTTTGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NGGLGTGRKAGISCKARLVVGMV*SPLAGQ
Trigger: CTGCCCTGCCAAAGGAGACCAAACCATGCCAACCAC...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAAGGCATAATGTTGCCATaGCACCAGAGAGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKGIMLP*HQREAR
Trigger: CCTGGCCTCTCTCTGGTGCCATGGCAACATTATGCC...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCTCCATGTCCTTGCTaGTCCTGGCAATGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: NGGLGTGRKAGISCKARLPPCPC*SWQCPL
Trigger: AAGAGGACATTGCCAGGATCAGCAAGGACATGGAGG...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTTGGGCTGCAGCTGCCTaGGCTCCAGCAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTWAAAA*APAGRW
Trigger: CCATCGTCCTGCTGGAGCTCAGGCAGCTGCAGCCCA...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACAACTCGTTGTGGCTTaGGTCCCTGCGCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQQLVVA*VPAPSS
Trigger: GCTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTG...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCCGAAGGACAAATTTGTaGGATTTGGGGTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSRRTNL*DLGSMN
Trigger: GTTCATAGACCCCAAATCTCACAAATTTGTCCTTCG...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTCCGGATGGGGCTCCTaGAGGAGCTCCCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSSGWGS*RSSPAA
Trigger: TGCTGCAGGGGAGCTCCTTCAGGAGCCCCATCCGGA...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGAAGCCCCTTCCTCTCTaGCCTTCCGTTTTTCACCCG +
Preference number: 4 (lower is better)
Translates to: AGNAHARANESSLTPSGLKPLPL*PSVFHP
Trigger: CGGGTGAAAAACGGAAGGTCAGAGAGGAAGGGGCTT...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAGCCCCTCACAAATTGTaGCACAAGGCTCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPAPHKL*HKAPAH
Trigger: ATGAGCTGGAGCCTTGTGGCACAATTTGTGAGGGGC...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACATCCACAAGGGAGACTaGATATTGCACAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYIHKGD*ILHNAL
Trigger: CAGGGCATTGTGCAATATGCAGTCTCCCTTGTGGAT...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAGGCCATATGCTTGGCTaGTCGGAATTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPGHMLG*SEFGGC
Trigger: ACAGCCTCCAAATTCCGAGCAGCCAAGCATATGGCC...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCTTCAGCCCGGCCATATaGTTGGCTGCTCGGAATTTG +
Preference number: 4 (lower is better)
Translates to: NGGLGTGRKAGISCKARLFSPAI*LAARNL
Trigger: CAAATTCCGAGCAGCCAAGCATATGGCCGGGCTGAA...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGTTCAGCCCGGCCATATaGTTGGCTGCTCGGAATTTG +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGFSPAI*LAARNL
Trigger: CAAATTCCGAGCAGCCAAGCATATGGCCGGGCTGAA...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTCCTGCGCCGAGCAGCTaGAGCAATCATGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSPAPSS*SNHGPG
Trigger: TCCCGGGCCATGATTGCTGCAGCTGCTCGGCGCAGG...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCCCAGGATGGCTCCTCTaGCCACAACCCAGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPPGWLL*PQPSQC
Trigger: ACACTGACTGGGTTGTGGGCAGAGGAGCCATCCTGG...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCACTGAAGGAGCTCCCCTaGAGCAGGGCTCCGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSALKELP*SRAPPG
Trigger: TCCTGGCGGAGCCCTGCTGCAGGGGAGCTCCTTCAG...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACACACACCAGGTCACCTaGCTCTTACCATTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYTHQVT*LLPFAV
Trigger: TACAGCAAATGGTAAGAGGCAGGTGACCTGGTGTGT...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTGGGACTCGCCATCGGTaGAGCGGACCACCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLGTRHR*SGPPAA
Trigger: CGCTGCAGGTGGTCCGCTCCACCGATGGCGAGTCCC...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGACCAATGCTGCTCGCTaGATACTCAGGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGNAHARANESSLTPSGLTNAAR*ILRCPR
Trigger: CCTGGGACACCTGAGTATCCAGCGAGCAGCATTGGT...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGACCCGGGACTGGCCAGTaGCATTGTTACTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRPGTGQ*HCYWGH
Trigger: ATGGCCCCAGTAACAATGCCACTGGCCAGTCCCGGG...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAGAGGGGAAAATGGCCTaGGCGGCCTCCCTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAEGKMA*AASLGS
Trigger: GGACCCTAGGGAGGCCGCCCAGGCCATTTTCCCCTC...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCCACTCTTTTTCAGGGTaGACAGCCCCTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: NGGLGTGRKAGISCKARLHSFSG*TAPASF
Trigger: GAAGGAAGCAGGGGCTGTCCACCCTGAAAAAGAGTG...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGCTGGAAGTCTACAAGTaGGCTGACCAGAAGCAACGG +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGLEVYK*ADQKQR
Trigger: CCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAG...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTCAGGTGGGGGCAGGATaGCATGGAGGCCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLQVGAG*HGGQVG
Trigger: GCCCACCTGGCCTCCATGCCATCCTGCCCCCACCTG...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGCTGTGCTTTACCTGCTaGGCACCCCACACTTCCCTA +
Preference number: 4 (lower is better)
Translates to: AGNAHARANESSLTPSGLLCFTC*APHTSL
Trigger: TAGGGAAGTGTGGGGTGCCCAGCAGGTAAAGCACAG...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACAGGGCTCCGCCAGGATaGCTCCTCTGCCCACAACCC +
Preference number: 4 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHRAPPG*LLCPQP
Trigger: GGGTTGTGGGCAGAGGAGCCATCCTGGCGGAGCCCT...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAATCCACGCCACACCTATaGGTTCCCCCTTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PSPITNSLSNKSLVPTDESTPHL*VPPSFF
Trigger: GAAGAAGGAAGGGGGAACCCATAGGTGTGGCGTGGA...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCACTTTCTTCACCCTGCTaGGAATGCACATGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPLSSPC*ECTCQS
Trigger: GCTCTGGCATGTGCATTCCCAGCAGGGTGAAGAAAG...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCTACTTCAAGGTACAGTaGACTGAGGGGTTAGAATCA +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSYFKVQ*TEGLES
Trigger: TGATTCTAACCCCTCAGTCCACTGTACCTTGAAGTA...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGACACAGGATGGGGCTGTaGACAGCCCCTCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRHRMGL*TAPLTP
Trigger: TGGAGTGAGAGGGGCTGTCCACAGCCCCATCCTGTG...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGCAAATAAGACCTGCCTaGCCCAGGCCTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AGNAHARANESSLTPSGLQIRPA*PRPLWF
Trigger: GAACCAGAGAGGCCTGGGCCAGGCAGGTCTTATTTG...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGCTCCGAGGTGCCTGTaGTGGCCGTGGTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEAPRCL*WPWWSL
Trigger: GAGAGACCACCACGGCCATCACAGGCACCTCGGAGC...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTGGACCACCTGCAGCGTaGACATGGGCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLGPPAA*TWAAAA
Trigger: GGCAGCTGCAGCCCATGTTCACGCTGCAGGTGGTCC...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGCAACTCGTTGTGGCTTaGGTCCCTGCGCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLQLVVA*VPAPSS
Trigger: GCTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTG...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACTCAGCCTGGAGACGCTaGATGTGGATGAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GISCKARLPRSTSSTLVYSAWRR*MWMKAS
Trigger: AGAGGCCTTCATCCACATTCAGCGTCTCCAGGCTGA...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGGGTGGGGCCCGCACTaGGGTACCGTTCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEGWGPH*GTVLGR
Trigger: CCTTCCTAGAACGGTACCTCAGTGCGGGCCCCACCC...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGAAGGCAGGTATCTCCTaGACTGCCCACGACTTTCAT +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGKAGIS*TAHDFH
Trigger: ATGAAAGTCGTGGGCAGTTCAGGAGATACCTGCCTT...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGCCAAGCCCCAGGCAATaGACTACAACACAGCAAACA +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGPSPRQ*TTTQQT
Trigger: TGTTTGCTGTGTTGTAGTTCATTGCCTGGGGCTTGG...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCGATTATGAGGCAAAATaGGAGAGAAATCTACCACCA +
Preference number: 4 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSDYEAK*ERNLPP
Trigger: TGGTGGTAGATTTCTCTCTCATTTTGCCTCATAATC...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAATCTGGTCCCCACAGATaGAGCTTTCTTAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKSGPHR*SFLRLK
Trigger: CTTCAGCCTAAGAAAGCTTCATCTGTGGGGACCAGA...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACACAAATTCTGCCTGTTaGGCTCTCCGAGGCGCAACC +
Preference number: 4 (lower is better)
Translates to: GISCKARLPRSTSSTLVYTNSAC*ALRGAT
Trigger: GGTTGCGCCTCGGAGAGCGCAACAGGCAGAATTTGT...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310260.7
CDS-3UTR GCA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCCTGCATATTGCACAATaGCCTGGTAATTCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: NGGLGTGRKAGISCKARLLHIAQ*PGNSGP
Trigger: GGGACCGGAATTACCAGGGCATTGTGCAATATGCAG...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGGCCATATGCTTGGCTaGTCGGAATTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLGHMLG*SEFGGC
Trigger: ACAGCCTCCAAATTCCGAGCAGCCAAGCATATGGCC...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGTTCAGCCCGGCCATATaGTTGGCTGCTCGGAATTTG +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLFSPAI*LAARNL
Trigger: CAAATTCCGAGCAGCCAAGCATATGGCCGGGCTGAA...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTCCTGCGCCGAGCAGCTaGAGCAATCATGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLPAPSS*SNHGPG
Trigger: TCCCGGGCCATGATTGCTGCAGCTGCTCGGCGCAGG...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAACCTGCGCCGAGCAGCTaGAGCAATCATGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEPAPSS*SNHGPG
Trigger: TCCCGGGCCATGATTGCTGCAGCTGCTCGGCGCAGG...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTCCTGCGCCGAGCAGCTaGAGCAATCATGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLPAPSS*SNHGPG
Trigger: TCCCGGGCCATGATTGCTGCAGCTGCTCGGCGCAGG...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCCTGGGGCTTTCTGCTaGTCCTCAGCCTGGAGACGC +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTPGAFC*SSAWRR
Trigger: GCGTCTCCAGGCTGAGGAGCAGCAGAAAGCCCCAGG...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGTCCTTGTCATATTaGAGGGTGGGGCCCGCACTG +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQRSLSY*RVGPAL
Trigger: CAGTGCGGGCCCCACCCTGCAATATGACAAGGACCG...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTGCAAAGGCAGCCCAGTaGAAGAGGTCCGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTAKAAQ*KRSGWG
Trigger: GCCCCATCCGGACCTCTTGCACTGGGCTGCCTTTGC...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGAGCCCGTCTCACACTTaGCATCTCTTACCCCATTTC +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGSPSHT*HLLPHF
Trigger: GAAATGGGGTAAGAGATGGCAAGTGTGAGACGGGCT...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAAAACCTTTCTTCACCCTaGTGGGAATGCACATGCCAG +
Preference number: 4 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKNLSSP*WECTCQ
Trigger: CTGGCATGTGCATTCCCAGCAGGGTGAAGAAAGGTT...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGGTCAAGCCCCTGCCTaGCTCCCTGCACCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSGQAPA*LPAPKA
Trigger: GGCCTTGGGTGCAGGGAGGCAGGCAGGGGCTTGACC...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCACACCTGCAGATCAGATaGCCAAGTCCCATCACTAAC +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPHLQIR*PSPITN
Trigger: GTTAGTGATGGGACTTGGGCATCTGATCTGCAGGTG...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAGCTGGTTGGCAAAACTaGCCCTCCTGGTTACAATGT +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPAGWQN*PSWLQC
Trigger: ACATTGTAACCAGGAGGGGCAGTTTTGCCAACCAGC...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCACTACCCAGTTTATaGAGGAACTCACTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: NGGLGTGRKAGISCKARLPLPSL*RNSLRP
Trigger: AGGCCTGAGTGAGTTCCTGCATAAACTGGGTAGTGG...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGAAACCTCAAGGAGTCTaGAAATTAGAAGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRKPQGV*KLEEEP
Trigger: TGGCTCCTCTTCTAATTTCCAGACTCCTTGAGGTTT...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCACCAATGCTGCTCGCTaGATACTCAGGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPTNAAR*ILRCPR
Trigger: CCTGGGACACCTGAGTATCCAGCGAGCAGCATTGGT...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAGGGGAAAATGGCCTaGGCGGCCTCCCTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEEGKMA*AASLGS
Trigger: GGACCCTAGGGAGGCCGCCCAGGCCATTTTCCCCTC...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCACTTCTGGAGAGCCCTaGCCATGGAGGGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPTSGEP*PWRGKW
Trigger: CCATTTTCCCCTCCATGGCCAGGGCTCTCCAGAAGT...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAACTTCTGGAGAGCCCTaGCCATGGAGGGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLTSGEP*PWRGKW
Trigger: CCATTTTCCCCTCCATGGCCAGGGCTCTCCAGAAGT...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCAAGCAACGGGGGACTTaGTACTGGACGAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPKQRGT*YWTKGR
Trigger: CCTGCCTTTCGTCCAGTACCAAGTCCCCCGTTGCTT...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACAAACGGAACAGGACCTaGGAAAACGGGACTTATAGA +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYKRNRT*ENGTYR
Trigger: TCTATAAGTCCCGTTTTCCCAGGTCCTGTTCCGTTT...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGGTCTTTATTCCGGGGTaGCTTGTGTCTCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGVFIPG*LVSLSS
Trigger: ACTAGAGAGAGACACAAGTCACCCCGGAATAAAGAC...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAGAAAAGAGGCGACGGTaGGGCCCAGGTAGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAEKRRR*GPGSVC
Trigger: GCAAACGCTACCTGGGCCTCACCGTCGCCTCTTTTC...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATGGACCACCTGCAGCGTaGACATGGGCTGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNGPPAA*TWAAAA
Trigger: GGCAGCTGCAGCCCATGTTCACGCTGCAGGTGGTCC...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAAAGTTCTGCTGCCGGGTaGTGCGCAGGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQSSAAG*CAGTSG
Trigger: TCCAGAAGTACCTGCGCATCACCCGGCAGCAGAACT...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGGGTGGGGCCCGCACTaGGGTACCGTTCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSGWGPH*GTVLGR
Trigger: CCTTCCTAGAACGGTACCTCAGTGCGGGCCCCACCC...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCACAGGGGAAAGCCCACTaGAATCAGCTGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPQGKAH*NQLCLT
Trigger: TGTTAAACACAGCTGATTTCAGTGGGCTTTCCCCTG...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGCACTTGTGGAGTGTATaGAGCAGTAAGGGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGHLWSV*SSKGVR
Trigger: CCTTACTCCCTTACTGCTTCATACACTCCACAAGTG...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGTCTGTTAACCAGACATaGGACCTTGGACAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: AGNAHARANESSLTPSGLSVNQT*DLGQAP
Trigger: AGGGGCTTGTCCAAGGTCTCATGTCTGGTTAACAGA...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAATCTGGTCCCCACAGATaGAGCTTTCTTAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PSPITNSLSNKSLVPTDESGPHR*SFLRLK
Trigger: CTTCAGCCTAAGAAAGCTTCATCTGTGGGGACCAGA...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTACCATCACTAACTCCCTaGGCAACAAGTCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLPSLTP*ATSLWS
Trigger: GGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGG...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGAACAGGAACAAATTCTaGCTGTTGCGCTCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLNRNKF*LLRSPR
Trigger: CCTCGGAGAGCGCAACAGGCAGAATTTGTTCCTGTT...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310260.7
CDS-3UTR GCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTGGCCCAGGTAGCGTTTaGAATCCAGCCCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSGPGSV*NPAPRC
Trigger: ACAGCGTGGGGCTGGATTGCAAACGCTACCTGGGCC...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGCTGCATATTGCACAATaGCCTGGTAATTCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: AGNAHARANESSLTPSGLLHIAQ*PGNSGP
Trigger: GGGACCGGAATTACCAGGGCATTGTGCAATATGCAG...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGATCCACAAGGGAGACTaGATATTGCACAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGIHKGD*ILHNAL
Trigger: CAGGGCATTGTGCAATATGCAGTCTCCCTTGTGGAT...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAGTGGAGCGGACCACCTaGAGCGTGAACATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEVERTT*SVNMGC
Trigger: GCAGCCCATGTTCACGCTGCAGGTGGTCCGCTCCAC...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGTGTGGCTTGAGTCCCTaGGCCGAGCAGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLCGLSP*AEQLQQ
Trigger: TTGCTGCAGCTGCTCGGCGCAGGGACTCAAGCCACA...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAATCCCTGTGCTTTACCTaGTGGGCACCCCACACTTCC +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQSLCFT*WAPHTS
Trigger: GGAAGTGTGGGGTGCCCAGCAGGTAAAGCACAGGGA...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAAACCCAGTCAGTGTCTaGTCCCCCAGGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEENPVSV*SPRARG
Trigger: TCCCCTGGCCCTGGGGGAGCAGACACTGACTGGGTT...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAGGGAGTAAGGGGGTGTaGACACATACAAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPGSKGV*THTKSI
Trigger: AATGCTCTTTGTATGTGTGCACACCCCCTTACTCCC...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGCTGCCTCTTACCATTTaGTGTAAAGAACTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRLPLTI*CKELVF
Trigger: GAAGACAAGTTCTTTACAGCAAATGGTAAGAGGCAG...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAAGAAAGACGGTGGGATaGAAACTGCTTGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPRKTVG*KLLAEN
Trigger: GTTCTCAGCAAGCAGTTTGCATCCCACCGTCTTTCT...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACGGTCCCAGAGGAGTTTaGCATTTAATTAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYGPRGV*HLIKAY
Trigger: GTAGGCTTTAATTAAATGGCAAACTCCTCTGGGACC...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTACCCCACCCTCATCTTTaGTGGCATCCTGCACTCTAT +
Preference number: 4 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLPHPHL*WHPALY
Trigger: ATAGAGTGCAGGATGCCAGCAAAGATGAGGGTGGGG...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAACCACTACCCAGTTTATaGAGGAACTCACTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEPLPSL*RNSLRP
Trigger: AGGCCTGAGTGAGTTCCTGCATAAACTGGGTAGTGG...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCCCGGGACTGGCCAGTaGCATTGTTACTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTPGTGQ*HCYWGH
Trigger: ATGGCCCCAGTAACAATGCCACTGGCCAGTCCCGGG...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCACCCGGGACTGGCCAGTaGCATTGTTACTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAPGTGQ*HCYWGH
Trigger: ATGGCCCCAGTAACAATGCCACTGGCCAGTCCCGGG...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCCACTCTTTTTCAGGGTaGACAGCCCCTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPHSFSG*TAPASF
Trigger: GAAGGAAGCAGGGGCTGTCCACCCTGAAAAAGAGTG...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAAGAAAACACAGGGACTaGACAGCAGCAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLRKHRD*TAAVAS
Trigger: GCTGGCAACTGCTGCTGTCCAGTCCCTGTGTTTTCT...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAACAGCAGGACCCAGATTaGAAGGTAAACCAAGGACTC +
Preference number: 4 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEQQDPD*KVNQGL
Trigger: GAGTCCTTGGTTTACCTTCCAATCTGGGTCCTGCTG...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGGGAGGGAAAAGTCACTaGTTTAGAGCGACCTCTCAA +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGGGKSH*FRATSQ
Trigger: TTGAGAGGTCGCTCTAAACCAGTGACTTTTCCCTCC...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTGAGATCCCCACAGGATaGGGCTGTGGACAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLEIPTG*GCGQPL
Trigger: GAGGGGCTGTCCACAGCCCCATCCTGTGGGGATCTC...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 72 bp TGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTaGGTTTACAGCTGTAACAGAAGCTCCAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: CKARLPRSTSST*VYSCNRSSKEW
Trigger: CCATTCCTTGGAGCTTCTGTTACAGCTGTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
3UTR CAA 72 bp GTTTGGTCTCCTTTGGCAGGGCAGCTTGCTCTAAGCTaGGGAAGAACTTACGTCCCCAGGAAATTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: VWSPLAGQLALS*GRTYVPRKLSG
Trigger: GCCACTTAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAAAGGAGACCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 72 bp CCCACTACCCAGTTTATGCAGGAACTCACTCAGGCCTaGTCATACACATATGGTGACCATGAGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PTTQFMQELTQA*SYTYGDHEQRL
Trigger: CAGCCTCTGCTCATGGTCACCATATGTGTATGACAAGGCCTGAGTGAGTTCCTGCATAAACTGGGTAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAGAAAAGAGGCGACGGTaGGGCCCAGGTAGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEEKRRR*GPGSVC
Trigger: GCAAACGCTACCTGGGCCTCACCGTCGCCTCTTTTC...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTAGTTCTGCTGCCGGGTaGTGCGCAGGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPSSAAG*CAGTSG
Trigger: TCCAGAAGTACCTGCGCATCACCCGGCAGCAGAACT...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATGGGTGGGGCCCGCACTaGGGTACCGTTCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDGWGPH*GTVLGR
Trigger: CCTTCCTAGAACGGTACCTCAGTGCGGGCCCCACCC...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAAGTCTACAAGTGGGCTaGCCAGAAGCAACGGGGGAC +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSASLQVG*PEATGD
Trigger: GTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACT...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCCCAAGCCCCAGGCAATaGACTACAACACAGCAAACA +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPPSPRQ*TTTQQT
Trigger: TGTTTGCTGTGTTGTAGTTCATTGCCTGGGGCTTGG...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAATGACACGTATCTGCTaGGCTACACACCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLMTRIC*ATHLLQ
Trigger: CTGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCAT...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACTCTGTTAACCAGACATaGGACCTTGGACAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GISCKARLPRSTSSTLVYSVNQT*DLGQAP
Trigger: AGGGGCTTGTCCAAGGTCTCATGTCTGGTTAACAGA...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAGGTGTAAATCCAAAGTaGAAGAAGAGATCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPGVNPK*KKRSCL
Trigger: GAGGCAGGATCTCTTCTTTCACTTTGGATTTACACC...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCTGTGAGTTAAATCACTaGGCCAGTATCTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPCELNH*ASICPH
Trigger: GTGGGGGCAGATACTGGCTCAGTGATTTAACTCACA...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGATCTTGGGATATGCTGTaGTCCGAGGTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRSWDML*SEVPVM
Trigger: CATCACAGGCACCTCGGAGCACAGCATATCCCAAGA...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTGGCCCAGGTAGCGTTTaGAATCCAGCCCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLGPGSV*NPAPRC
Trigger: ACAGCGTGGGGCTGGATTGCAAACGCTACCTGGGCC...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGATCCACAAGGGAGACTaGATATTGCACAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLIHKGD*ILHNAL
Trigger: CAGGGCATTGTGCAATATGCAGTCTCCCTTGTGGAT...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATGTGGAGCGGACCACCTaGAGCGTGAACATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNVERTT*SVNMGC
Trigger: GCAGCCCATGTTCACGCTGCAGGTGGTCCGCTCCAC...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTTGTGGCTTGAGTCCCTaGGCCGAGCAGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLCGLSP*AEQLQQ
Trigger: TTGCTGCAGCTGCTCGGCGCAGGGACTCAAGCCACA...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCTGCAACCACCAGCCTTaGTTTCCGCTTCTTTACTCG +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPCNHQP*FPLLYS
Trigger: CGAGTAAAGAAGCGGAAAGCAAGGCTGGTGGTTGCA...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCACCTGGGGCTTTCTGCTaGTCCTCAGCCTGGAGACGC +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSPGAFC*SSAWRR
Trigger: GCGTCTCCAGGCTGAGGAGCAGCAGAAAGCCCCAGG...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAACGGTCCTTGTCATATTaGAGGGTGGGGCCCGCACTG +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEERSLSY*RVGPAL
Trigger: CAGTGCGGGCCCCACCCTGCAATATGACAAGGACCG...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTTCCCTGTGCTTTACCTaGTGGGCACCCCACACTTCC +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTSLCFT*WAPHTS
Trigger: GGAAGTGTGGGGTGCCCAGCAGGTAAAGCACAGGGA...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTGCAGTGTGGGGCTCCTaGTGCAGCCTAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLAVWGS*CSLKVA
Trigger: TGCCACCTTTAGGCTGCAGCAGGAGCCCCACACTGC...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAGCAGTGTGGGGCTCCTaGTGCAGCCTAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEAVWGS*CSLKVA
Trigger: TGCCACCTTTAGGCTGCAGCAGGAGCCCCACACTGC...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAATATCCAACACACACCTaGACAGCTAGTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKYPTHT*TASLSI
Trigger: AATGGAGAGACTAGCTGTGCAGGTGTGTGTTGGATA...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGTATCCAACACACACCTaGACAGCTAGTCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGYPTHT*TASLSI
Trigger: AATGGAGAGACTAGCTGTGCAGGTGTGTGTTGGATA...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGACTGGCAATGTCCTCTTaGGATATGCTGTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRLAMSS*DMLCSE
Trigger: CTCGGAGCACAGCATATCCCAAGAGGACATTGCCAG...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCAAACACAAACACCCGTaGCATGTCAGCTCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPKHKHP*HVSSPL
Trigger: AAGCGGAGAGCTGACATGCCACGGGTGTTTGTGTTT...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACAGCCCGGCCATATGCTTaGCTGCTCGGAATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATARPYA*LLGIWR
Trigger: CCTCCAAATTCCGAGCAGCCAAGCATATGGCCGGGC...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGCGCAGGTACTTCTaGAGAGCCCTGGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAMRRYF*RALAME
Trigger: CTCCATGGCCAGGGCTCTCCAGAAGTACCTGCGCAT...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACATGCGCAGGTACTTCTaGAGAGCCCTGGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHMRRYF*RALAME
Trigger: CTCCATGGCCAGGGCTCTCCAGAAGTACCTGCGCAT...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAAGCACCAGCTCCACTTTaGTTTACAGCTGTAACAGAA +
Preference number: 4 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKAPAPL*FTAVTE
Trigger: TTCTGTTACAGCTGTAAACCAAAGTGGAGCTGGTGC...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAAAAGCAACGGGGGACTTaGTACTGGACGAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQKQRGT*YWTKGR
Trigger: CCTGCCTTTCGTCCAGTACCAAGTCCCCCGTTGCTT...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGAAGCCAGCAGAGGGGTaGGATCAGAAACAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLKPAEG*DQKQGR
Trigger: CCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGCTT...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTGAAAACTGGGCAGTGTaGGGCTCCTGCTGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTENWAV*GSCCSL
Trigger: TAGGCTGCAGCAGGAGCCCCACACTGCCCAGTTTTC...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGAAGAAAACACAGGGACTaGACAGCAGCAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRRKHRD*TAAVAS
Trigger: GCTGGCAACTGCTGCTGTCCAGTCCCTGTGTTTTCT...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCACAGATGAATCTTTCTaGACAAGATGGGCTCCCTAC +
Preference number: 4 (lower is better)
Translates to: NGGLGTGRKAGISCKARLTDESF*TRWAPY
Trigger: GTAGGGAGCCCATCTTGTCCAGAAAGATTCATCTGT...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGAGAACAAAAGCACCATaGTTCCATGGTATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRRTKAP*FHGMCF
Trigger: AAAACACATACCATGGAACCATGGTGCTTTTGTTCT...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACGGCATAATGTTGCCATaGCACCAGAGAGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDGIMLP*HQREAR
Trigger: CCTGGCCTCTCTCTGGTGCCATGGCAACATTATGCC...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACCAAAACTGCCCCTCCTaGTTACAATGTACAGTATTA +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYQNCPS*LQCTVL
Trigger: TAATACTGTACATTGTAACCAGGAGGGGCAGTTTTG...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGAAAAGAGGCGACGGTaGGGCCCAGGTAGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSEKRRR*GPGSVC
Trigger: GCAAACGCTACCTGGGCCTCACCGTCGCCTCTTTTC...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCATCAGCCTGGAGACGCTaGATGTGGATGAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSASAWRR*MWMKAS
Trigger: AGAGGCCTTCATCCACATTCAGCGTCTCCAGGCTGA...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAAGTCTACAAGTGGGCTaGCCAGAAGCAACGGGGGAC +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEESLQVG*PEATGD
Trigger: GTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACT...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAATGCTGGGACTGACTTaGGGCTTCACACAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEMLGLT*GFTQSR
Trigger: CCGGCTCTGTGTGAAGCCTCAAGTCAGTCCCAGCAT...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTATGCTGGGACTGACTTaGGGCTTCACACAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLMLGLT*GFTQSR
Trigger: CCGGCTCTGTGTGAAGCCTCAAGTCAGTCCCAGCAT...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCCTACAGCAAGATGGCTaGTTACCGAAATACTGGAAA +
Preference number: 4 (lower is better)
Translates to: NGGLGTGRKAGISCKARLLQQDG*LPKYWK
Trigger: TTTCCAGTATTTCGGTAATCAGCCATCTTGCTGTAG...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGCTACAGCAAGATGGCTaGTTACCGAAATACTGGAAA +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGLQQDG*LPKYWK
Trigger: TTTCCAGTATTTCGGTAATCAGCCATCTTGCTGTAG...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCTTTTGTTGGTTTCACTaGGTGGCTGGAGCACTCACT +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPFCWFH*VAGALT
Trigger: AGTGAGTGCTCCAGCCACTCAGTGAAACCAACAAAA...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCCAGCTATATACACAATaGCACGTATCTGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: NGGLGTGRKAGISCKARLQLYTQ*HVSAEL
Trigger: TAGCTCAGCAGATACGTGTCATTGTGTATATAGCTG...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGGATCCTGCCTCCCAATaGACTCTCACCCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLDPASQ*TLTPGS
Trigger: AGAACCTGGGGTGAGAGTTCATTGGGAGGCAGGATC...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACTCTTGGGATATGCTGTaGTCCGAGGTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDSWDML*SEVPVM
Trigger: CATCACAGGCACCTCGGAGCACAGCATATCCCAAGA...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGGCCCAGGTAGCGTTTaGAATCCAGCCCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSGPGSV*NPAPRC
Trigger: ACAGCGTGGGGCTGGATTGCAAACGCTACCTGGGCC...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACATCCACAAGGGAGACTaGATATTGCACAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: GISCKARLPRSTSSTLVYIHKGD*ILHNAL
Trigger: CAGGGCATTGTGCAATATGCAGTCTCCCTTGTGGAT...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTGTGGAGCGGACCACCTaGAGCGTGAACATGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSVERTT*SVNMGC
Trigger: GCAGCCCATGTTCACGCTGCAGGTGGTCCGCTCCAC...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATCCTGGGGCTTTCTGCTaGTCCTCAGCCTGGAGACGC +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDPGAFC*SSAWRR
Trigger: GCGTCTCCAGGCTGAGGAGCAGCAGAAAGCCCCAGG...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACATGGGAAAGGGTTACCTaGTTCAAGCCAGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATWERVT*FKPAEG
Trigger: CCCCTCTGCTGGCTTGAAGCAGGTAACCCTTTCCCA...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACCTCTCAAATAAGACCTaGCTGGCCCAGGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHLSNKT*LAQASL
Trigger: CAGAGAGGCCTGGGCCAGGCAGGTCTTATTTGAGAG...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCAAAACCTCAAGGAGTCTaGAAATTAGAAGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPKPQGV*KLEEEP
Trigger: TGGCTCCTCTTCTAATTTCCAGACTCCTTGAGGTTT...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGCACCAGCTCCACTTTaGTTTACAGCTGTAACAGAA +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLAPAPL*FTAVTE
Trigger: TTCTGTTACAGCTGTAAACCAAAGTGGAGCTGGTGC...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTAAGCAACGGGGGACTTaGTACTGGACGAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSKQRGT*YWTKGR
Trigger: CCTGCCTTTCGTCCAGTACCAAGTCCCCCGTTGCTT...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTAAGCAACGGGGGACTTaGTACTGGACGAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTKQRGT*YWTKGR
Trigger: CCTGCCTTTCGTCCAGTACCAAGTCCCCCGTTGCTT...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACCCAGCGTGGTTGGCATaGTTTGGTCTCCTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHPAWLA*FGLLWQ
Trigger: CTGCCAAAGGAGACCAAACCATGCCAACCACGCTGG...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTCCACGCCACACCTATaGGTTCCCCCTTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSSTPHL*VPPSFF
Trigger: GAAGAAGGAAGGGGGAACCCATAGGTGTGGCGTGGA...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGTTGAATAGTACATCTTaGCTCCACGCCACACCTATG +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLLNSTS*LHATPM
Trigger: CATAGGTGTGGCGTGGAGCCAAGATGTACTATTCAA...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGAGTTGGGCAAAAATTTaGTGGTCAAGTATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRSWAKI*WSSIFS
Trigger: AGAGAAAATACTTGACCACCAAATTTTTGCCCAACT...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAAGTACGTAGGTTGGAGTaGCAAGGTAATCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKVRRLE*QGNQFL
Trigger: CAGAAATTGATTACCTTGCCACTCCAACCTACGTAC...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGATGGACCTGTACAGATaGTTGCTGGTAGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLMDLYR*LLVVSF
Trigger: GAATGACACTACCAGCAACCATCTGTACAGGTCCAT...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTCCTCCATGTCCTTGCTaGTCCTGGCAATGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSPPCPC*SWQCPL
Trigger: AAGAGGACATTGCCAGGATCAGCAAGGACATGGAGG...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGCCTCCATGTCCTTGCTaGTCCTGGCAATGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLPPCPC*SWQCPL
Trigger: AAGAGGACATTGCCAGGATCAGCAAGGACATGGAGG...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTGACGCTGAATGTGGATaGAGGCCTCTTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTDAECG*RPLPLQ
Trigger: TTGCAGTGGAAGAGGCCTTCATCCACATTCAGCGTC...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGCGAAGGACAAATTTGTaGGATTTGGGGTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLRRTNL*DLGSMN
Trigger: GTTCATAGACCCCAAATCTCACAAATTTGTCCTTCG...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCCAGACAGACCACAGATaGATCTTTCTGGACAAGATG +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPQTDHR*IFLDKM
Trigger: CATCTTGTCCAGAAAGATTCATCTGTGGTCTGTCTG...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAACATTACCTCTATAACTaGGAGGTGCTGGTAAATGAA +
Preference number: 4 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKHYLYN*EVLVNE
Trigger: TTCATTTACCAGCACCTCTCAGTTATAGAGGTAATG...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAAGGGTCATCTATAATGTaGGTTAAATCACTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEGSSIM*VKSLSQ
Trigger: CTGGCTCAGTGATTTAACTCACATTATAGATGACCC...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTGCCCCTCACAAATTGTaGCACAAGGCTCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSAPHKL*HKAPAH
Trigger: ATGAGCTGGAGCCTTGTGGCACAATTTGTGAGGGGC...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGGCCCCTCACAAATTGTaGCACAAGGCTCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLAPHKL*HKAPAH
Trigger: ATGAGCTGGAGCCTTGTGGCACAATTTGTGAGGGGC...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTGGCCATATGCTTGGCTaGTCGGAATTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTGHMLG*SEFGGC
Trigger: ACAGCCTCCAAATTCCGAGCAGCCAAGCATATGGCC...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACATTCAGCCCGGCCATATaGTTGGCTGCTCGGAATTTG +
Preference number: 4 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATFSPAI*LAARNL
Trigger: CAAATTCCGAGCAGCCAAGCATATGGCCGGGCTGAA...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAATGCAACCACCAGCCTTaGTTTCCGCTTCTTTACTCG +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQCNHQP*FPLLYS
Trigger: CGAGTAAAGAAGCGGAAAGCAAGGCTGGTGGTTGCA...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAGCTCCAAGTTGCACCTaGCAATCCCAGAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAAPSCT*QSQSHS
Trigger: ACTGTGACTCTGGGATTGGCAGGTGCAACTTGGAGC...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACTTGGTTAAAGCTCAATaGAGTTATTTCAACAGTGTC +
Preference number: 4 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYLVKAQ*SYFNSV
Trigger: GACACTGTTGAAATAACTGCATTGAGCTTTAACCAA...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTCGGTGGGATGCAAACTaGTTGCTGAGAACACCTACG +
Preference number: 4 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPRWDAN*LLRTPT
Trigger: CGTAGGTGTTCTCAGCAAGCAGTTTGCATCCCACCG...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCACGGTGGGATGCAAACTaGTTGCTGAGAACACCTACG +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSARWDAN*LLRTPT
Trigger: CGTAGGTGTTCTCAGCAAGCAGTTTGCATCCCACCG...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCACTAAACTTGTCACCTaGAGATCAGATGCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPTKLVT*RSDAQV
Trigger: GACTTGGGCATCTGATCTGCAGGTGACAAGTTTAGT...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACTGGCTGCTCGGAATTTaGAGGCTGTTAGGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDWLLGI*RLLGGL
Trigger: CAAACCTCCTAACAGCCTCCAAATTCCGAGCAGCCA...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCACACTCTTTTTCAGGGTaGACAGCCCCTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAHSFSG*TAPASF
Trigger: GAAGGAAGCAGGGGCTGTCCACCCTGAAAAAGAGTG...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTCACTCTTTTTCAGGGTaGACAGCCCCTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSHSFSG*TAPASF
Trigger: GAAGGAAGCAGGGGCTGTCCACCCTGAAAAAGAGTG...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTGGAAGTCTACAAGTaGGCTGACCAGAAGCAACGG +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTLEVYK*ADQKQR
Trigger: CCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAG...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTCTGGAAGTCTACAAGTaGGCTGACCAGAAGCAACGG +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSLEVYK*ADQKQR
Trigger: CCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAG...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAAAGCCAGCAGAGGGGTaGGATCAGAAACAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSKPAEG*DQKQGR
Trigger: CCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGCTT...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACATTAGTCTCCCCTGGTTaGTGTAGAACAGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATLVSPG*CRTVGR
Trigger: CCTCCCCACTGTTCTACACCAACCAGGGGAGACTAA...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTCCCCAGGAAATTAAGTaGCTCCAAGTTGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSPQEIK*LQVAPA
Trigger: GGCAGGTGCAACTTGGAGCCACTTAATTTCCTGGGG...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTCCAGCGTGGTTGGCATaGTTTGGTCTCCTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLPAWLA*FGLLWQ
Trigger: CTGCCAAAGGAGACCAAACCATGCCAACCACGCTGG...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACTCTTTCTGGACAAGATaGGCTCCCTACTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDSFWTR*APYSPF
Trigger: GAAGGGAGAGTAGGGAGCCCATCTTGTCCAGAAAGA...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGTTAACACTGAAAGGCTaGGTTTTCCAGAAGGGATTC +
Preference number: 4 (lower is better)
Translates to: KAGISCKARLPRSTSSTLLTLKG*VFQKGF
Trigger: GAATCCCTTCTGGAAAACCCAGCCTTTCAGTGTTAA...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATCACAGGATGGGGCTGTaGACAGCCCCTCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: GGFISELSKLVLDLKSGNHRMGL*TAPLTP
Trigger: TGGAGTGAGAGGGGCTGTCCACAGCCCCATCCTGTG...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAACAAATAAGACCTGCCTaGCCCAGGCCTCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEQIRPA*PRPLWF
Trigger: GAACCAGAGAGGCCTGGGCCAGGCAGGTCTTATTTG...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAACCATGAGCAGAGGCTaGTTGGCAAAACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEETMSRG*LAKLPL
Trigger: GAGGGGCAGTTTTGCCAACCAGCCTCTGCTCATGGT...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAACCATGAGCAGAGGCTaGTTGGCAAAACTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEETMSRG*LAKLPL
Trigger: GAGGGGCAGTTTTGCCAACCAGCCTCTGCTCATGGT...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAATGGACCTGTACAGATaGTTGCTGGTAGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLMDLYR*LLVVSF
Trigger: GAATGACACTACCAGCAACCATCTGTACAGGTCCAT...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAAGTCTTTATTCCGGGGTaGCTTGTGTCTCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQVFIPG*LVSLSS
Trigger: ACTAGAGAGAGACACAAGTCACCCCGGAATAAAGAC...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGTGGGAGGTTGAATGGTaGCAGACTTTTCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLWEVEW*QTFLTL
Trigger: GAGGGTCAGAAAAGTCTGTCACCATTCAACCTCCCA...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACTCTCCAGTGGGAGGTTaGATGGTGACAGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDSPVGG*MVTDFS
Trigger: AGAAAAGTCTGTCACCATTCAACCTCCCACTGGAGA...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAGACGCTGAATGTGGATaGAGGCCTCTTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEDAECG*RPLPLQ
Trigger: TTGCAGTGGAAGAGGCCTTCATCCACATTCAGCGTC...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAAAACAAAGAACAAAGATaGAGGCAGGTATCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PSPITNSLSNKSLVPTDENKEQR*RQVSPE
Trigger: TTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTT...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACAGGGGAAAGCCCACTaGAATCAGCTGTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQQGKAH*NQLCLT
Trigger: TGTTAAACACAGCTGATTTCAGTGGGCTTTCCCCTG...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAATTTCGCTACTGCACTaGATACCAATCAAGAACGGT +
Preference number: 4 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLISLLH*IPIKNG
Trigger: ACCGTTCTTGATTGGTATTCAGTGCAGTAGCGAAAT...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACATTTCGCTACTGCACTaGATACCAATCAAGAACGGT +
Preference number: 4 (lower is better)
Translates to: GISCKARLPRSTSSTLVYISLLH*IPIKNG
Trigger: ACCGTTCTTGATTGGTATTCAGTGCAGTAGCGAAAT...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGACCCTACAACTTCAGTTaGACTAAACTTGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRPYNFS*TKLVTC
Trigger: GCAGGTGACAAGTTTAGTTCAACTGAAGTTGTAGGG...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAACTTTTCTGACCCTCTaGCGTCTTTATTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSATFLTL*RLYSGV
Trigger: CACCCCGGAATAAAGACGGCAGAGGGTCAGAAAAGT...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTCTTGGGATATGCTGTaGTCCGAGGTGCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLSWDML*SEVPVM
Trigger: CATCACAGGCACCTCGGAGCACAGCATATCCCAAGA...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACAATGAGGAGTTTGAATaGCATGGAGATAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GISCKARLPRSTSSTLVYNEEFE*HGDKEP
Trigger: GGGCTCTTTATCTCCATGGCATTCAAACTCCTCATT...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAGGCCATATGCTTGGCTaGTCGGAATTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEGHMLG*SEFGGC
Trigger: ACAGCCTCCAAATTCCGAGCAGCCAAGCATATGGCC...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTTGCAACCACCAGCCTTaGTTTCCGCTTCTTTACTCG +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTCNHQP*FPLLYS
Trigger: CGAGTAAAGAAGCGGAAAGCAAGGCTGGTGGTTGCA...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACTACTGGTCAATCATCTaGCAGTTTCAGTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: GISCKARLPRSTSSTLVYYWSII*QFQSAM
Trigger: CATTGCTGACTGAAACTGGCAGATGATTGACCAGTA...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAAGGTATCTCCTGAACTaGCCACGACTTTCATGGGTG +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSARYLLN*PRLSWV
Trigger: CACCCATGAAAGTCGTGGGCAGTTCAGGAGATACCT...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGCTCCAAGTTGCACCTaGCAATCCCAGAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEAPSCT*QSQSHS
Trigger: ACTGTGACTCTGGGATTGGCAGGTGCAACTTGGAGC...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTTTGGCAGGGCAGCTTaGTCTAAGCTTGGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHFGRAA*SKLGKN
Trigger: GTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAAA...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAGAGGCGATGAGTTaGACAGTGACGGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSAEAMS*TVTVVR
Trigger: TCTGACCACCGTCACTGTGCAACTCATCGCCTCTGC...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATCCAGGATGGCTCCTCTaGCCACAACCCAGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDPGWLL*PQPSQC
Trigger: ACACTGACTGGGTTGTGGGCAGAGGAGCCATCCTGG...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACGGGAGTAAGGGGGTGTaGACACATACAAAGAGCATT +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDGSKGV*THTKSI
Trigger: AATGCTCTTTGTATGTGTGCACACCCCCTTACTCCC...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGATCTCATTTCGCTACTaGACTGAATACCAATCAAGA +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGISFRY*TEYQSR
Trigger: TCTTGATTGGTATTCAGTGCAGTAGCGAAATGAGAT...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACAAACACAAACACCCGTaGCATGTCAGCTCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHKHKHP*HVSSPL
Trigger: AAGCGGAGAGCTGACATGCCACGGGTGTTTGTGTTT...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCATGGCTGCTCGGAATTTaGAGGCTGTTAGGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAWLLGI*RLLGGL
Trigger: CAAACCTCCTAACAGCCTCCAAATTCCGAGCAGCCA...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAACTTCTGGAGAGCCCTaGCCATGGAGGGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSTSGEP*PWRGKW
Trigger: CCATTTTCCCCTCCATGGCCAGGGCTCTCCAGAAGT...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTCTGGAAGTCTACAAGTaGGCTGACCAGAAGCAACGG +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLLEVYK*ADQKQR
Trigger: CCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAG...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGTGGTTGGCATGGTTTaGTCTCCTTTGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSVVGMV*SPLAGQ
Trigger: CTGCCCTGCCAAAGGAGACCAAACCATGCCAACCAC...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAGTACGTAGGTTGGAGTaGCAAGGTAATCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLVRRLE*QGNQFL
Trigger: CAGAAATTGATTACCTTGCCACTCCAACCTACGTAC...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAATTTAAGATAAAAGCCTaGGGTTTGTCACCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEFKIKA*GLSPLS
Trigger: GGACAAAGGTGACAAACCCCAGGCTTTTATCTTAAA...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCACCCTCATCTTTGCTaGCATCCTGCACTCTATGCA +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTHPHLC*HPALYA
Trigger: TGCATAGAGTGCAGGATGCCAGCAAAGATGAGGGTG...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGATGAATGTAAGTAAATaGACCTGTACAGATGGTTGC +
Preference number: 4 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGMNVSK*TCTDGC
Trigger: GCAACCATCTGTACAGGTCCATTTACTTACATTCAT...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAGTCTTTATTCCGGGGTaGCTTGTGTCTCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAVFIPG*LVSLSS
Trigger: ACTAGAGAGAGACACAAGTCACCCCGGAATAAAGAC...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTGGTGACAGACTTTTCTaGCCCTCTGCCGTCTTTATT +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTGDRLF*PSAVFI
Trigger: AATAAAGACGGCAGAGGGTCAGAAAAGTCTGTCACC...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAGGTGACAGACTTTTCTaGCCCTCTGCCGTCTTTATT +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAGDRLF*PSAVFI
Trigger: AATAAAGACGGCAGAGGGTCAGAAAAGTCTGTCACC...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAATGGGAGGTTGAATGGTaGCAGACTTTTCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEWEVEW*QTFLTL
Trigger: GAGGGTCAGAAAAGTCTGTCACCATTCAACCTCCCA...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTGGGAGGTTGAATGGTaGCAGACTTTTCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLWEVEW*QTFLTL
Trigger: GAGGGTCAGAAAAGTCTGTCACCATTCAACCTCCCA...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTTCTCCAGTGGGAGGTTaGATGGTGACAGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTSPVGG*MVTDFS
Trigger: AGAAAAGTCTGTCACCATTCAACCTCCCACTGGAGA...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCACACTTGTGGAGTGTATaGAGCAGTAAGGGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAHLWSV*SSKGVR
Trigger: CCTTACTCCCTTACTGCTTCATACACTCCACAAGTG...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGCATGTCTTTTCAAGCTaGAGGCTAGTAATTGAAGAA +
Preference number: 4 (lower is better)
Translates to: AGNAHARANESSLTPSGLHVFSS*RLVIEE
Trigger: TTCTTCAATTACTAGCCTTCAGCTTGAAAAGACATG...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTACAGGGTAGTGAAGTTTaGGCAGTAATTTTCTTAGAG +
Preference number: 4 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLQGSEV*AVIFLE
Trigger: CTCTAAGAAAATTACTGCTCAAACTTCACTACCCTG...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGCAAACTGCTTGCTaGGAACACCTACGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAMQTAC*EHLRQG
Trigger: TCCTTGACGTAGGTGTTCTCAGCAAGCAGTTTGCAT...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATGTGAGTTAAATCACTaGGCCAGTATCTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEECELNH*ASICPH
Trigger: GTGGGGGCAGATACTGGCTCAGTGATTTAACTCACA...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAACTTTTCTGACCCTCTaGCGTCTTTATTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEETFLTL*RLYSGV
Trigger: CACCCCGGAATAAAGACGGCAGAGGGTCAGAAAAGT...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATTGTCCTCTTGGGATATaGTGTGCTCCGAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GGFISELSKLVLDLKSGNCPLGI*CAPRCL
Trigger: CAGGCACCTCGGAGCACAGCATATCCCAAGAGGACA...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCCCCTCACAAATTGTaGCACAAGGCTCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSAPHKL*HKAPAH
Trigger: ATGAGCTGGAGCCTTGTGGCACAATTTGTGAGGGGC...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTCTGCATATTGCACAATaGCCTGGTAATTCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLLHIAQ*PGNSGP
Trigger: GGGACCGGAATTACCAGGGCATTGTGCAATATGCAG...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTTGGGAAAGGGTTACCTaGTTCAAGCCAGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSWERVT*FKPAEG
Trigger: CCCCTCTGCTGGCTTGAAGCAGGTAACCCTTTCCCA...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATGCAGAGGCGATGAGTTaGACAGTGACGGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHAEAMS*TVTVVR
Trigger: TCTGACCACCGTCACTGTGCAACTCATCGCCTCTGC...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCAGAACGGCAATGATGTaGAACTGTCTAAATTCCCTA +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPRTAMM*NCLNSL
Trigger: TAGGGAATTTAGACAGTTGCACATCATTGCCGTTCT...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATGGCTGCTCGGAATTTaGAGGCTGTTAGGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEWLLGI*RLLGGL
Trigger: CAAACCTCCTAACAGCCTCCAAATTCCGAGCAGCCA...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCATGGTCAAAGGATACTaGTCAATCATCTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPMVKGY*SIICQF
Trigger: AAACTGGCAGATGATTGACCAGTATCCTTTGACCAT...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAAAGAAGCTCCAAGGAATaGCTTCTTGAGAAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQRSSKE*LLEKSH
Trigger: ATGGGACTTCTCAAGAAGCCATTCCTTGGAGCTTCT...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATCTGTGCTTTACCTGCTaGGCACCCCACACTTCCCTA +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDLCFTC*APHTSL
Trigger: TAGGGAAGTGTGGGGTGCCCAGCAGGTAAAGCACAG...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCATTAGTCTCCCCTGGTTaGTGTAGAACAGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSLVSPG*CRTVGR
Trigger: CCTCCCCACTGTTCTACACCAACCAGGGGAGACTAA...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATCAGCAGTTGCCAGCGTaGTTGGCATGGTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDQQLPA*LAWFGL
Trigger: GAGACCAAACCATGCCAACCACGCTGGCAACTGCTG...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAACAGCAGGACCCAGATTaGAAGGTAAACCAAGGACTC +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEQQDPD*KVNQGL
Trigger: GAGTCCTTGGTTTACCTTCCAATCTGGGTCCTGCTG...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGAACCAATCAAGAACGGTaGGCAGAAGAGCAATTCTTA +
Preference number: 4 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRTNQER*AEEQFL
Trigger: TAAGAATTGCTCTTCTGCCCACCGTTCTTGATTGGT...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTGATAACAAGGCTGGGTaGAACACGGACTGTGACATA +
Preference number: 4 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPDNKAG*NTDCDI
Trigger: TATGTCACAGTCCGTGTTCCACCCAGCCTTGTTATC...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTCACCCTCATCTTTGCTaGCATCCTGCACTCTATGCA +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLHPHLC*HPALYA
Trigger: TGCATAGAGTGCAGGATGCCAGCAAAGATGAGGGTG...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 72 bp TCCCCACTTAGGGATACTTACACAGCAGGACCCAGATaGGAAGGTAAACCAAGGACTCACTTTTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SPLRDTYTAGPR*EGKPRTHFCWF
Trigger: AAACCAACAAAAGTGAGTCCTTGGTTTACCTTCCAATCTGGGTCCTGCTGTGTAAGTATCCCTAAGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATCTCCAGTGGGAGGTTaGATGGTGACAGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEESPVGG*MVTDFS
Trigger: AGAAAAGTCTGTCACCATTCAACCTCCCACTGGAGA...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACCGAAGGACAAATTTGTaGGATTTGGGGTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDRRTNL*DLGSMN
Trigger: GTTCATAGACCCCAAATCTCACAAATTTGTCCTTCG...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACCAAGGAATGGCTTCTTaGGAAGTCCCATCGACAAAA +
Preference number: 4 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHQGMAS*EVPSTK
Trigger: TTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTG...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTCAAGGAATGGCTTCTTaGGAAGTCCCATCGACAAAA +
Preference number: 4 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPQGMAS*EVPSTK
Trigger: TTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTG...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTCAAGGAATGGCTTCTTaGGAAGTCCCATCGACAAAA +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSQGMAS*EVPSTK
Trigger: TTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTG...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAAAAGGAACTTCCAGTTTaGAGGGATCTAACGGCAAAA +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQKELPV*RDLTAK
Trigger: TTTTGCCGTTAGATCCCTTCAAACTGGAAGTTCCTT...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACCAGCTATATACACAATaGCACGTATCTGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDQLYTQ*HVSAEL
Trigger: TAGCTCAGCAGATACGTGTCATTGTGTATATAGCTG...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTATGCAAACTGCTTGCTaGGAACACCTACGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLMQTAC*EHLRQG
Trigger: TCCTTGACGTAGGTGTTCTCAGCAAGCAGTTTGCAT...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATCCATCACTAACTCCCTaGGCAACAAGTCTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHPSLTP*ATSLWS
Trigger: GGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGG...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTCCCTACAACTTCAGTTaGACTAAACTTGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSPYNFS*TKLVTC
Trigger: GCAGGTGACAAGTTTAGTTCAACTGAAGTTGTAGGG...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAAAATGAGGAGTTTGAATaGCATGGAGATAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQNEEFE*HGDKEP
Trigger: GGGCTCTTTATCTCCATGGCATTCAAACTCCTCATT...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCACTGCATATTGCACAATaGCCTGGTAATTCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSLHIAQ*PGNSGP
Trigger: GGGACCGGAATTACCAGGGCATTGTGCAATATGCAG...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCATGCAACCACCAGCCTTaGTTTCCGCTTCTTTACTCG +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSCNHQP*FPLLYS
Trigger: CGAGTAAAGAAGCGGAAAGCAAGGCTGGTGGTTGCA...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTAGAAAGACGGTGGGATaGAAACTGCTTGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLRKTVG*KLLAEN
Trigger: GTTCTCAGCAAGCAGTTTGCATCCCACCGTCTTTCT...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAGTCCTGTTTTACGTCTaGTCTGTCAAAAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAVLFYV*SVKSLG
Trigger: CCCAAGACTTTTGACAGAGCAGACGTAAAACAGGAC...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACTGGCTTTAGGAATCTaGTCTTTTGTTGGAGAGACT +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQLALGI*SFVGET
Trigger: AGTCTCTCCAACAAAAGAGCAGATTCCTAAAGCCAG...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGAGCATCCTGCACTCTATaGAATAGTTATGGCCATAAA +
Preference number: 4 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRASCTL*NSYGHK
Trigger: TTTATGGCCATAACTATTGCATAGAGTGCAGGATGC...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATGCTGGTTGGCAAAACTaGCCCTCCTGGTTACAATGT +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNAGWQN*PSWLQC
Trigger: ACATTGTAACCAGGAGGGGCAGTTTTGCCAACCAGC...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATCTGGCAATGTCCTCTTaGGATATGCTGTGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDLAMSS*DMLCSE
Trigger: CTCGGAGCACAGCATATCCCAAGAGGACATTGCCAG...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCACAGTGGCATTGTTACTaGGGCCATCTACATTGTAGA +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAQWHCY*GHLHCR
Trigger: TCTACAATGTAGATGGCCCCAGTAACAATGCCACTG...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTAGAAGCTCCAAGGAATaGCTTCTTGAGAAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSRSSKE*LLEKSH
Trigger: ATGGGACTTCTCAAGAAGCCATTCCTTGGAGCTTCT...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTAGAAGCTCCAAGGAATaGCTTCTTGAGAAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTRSSKE*LLEKSH
Trigger: ATGGGACTTCTCAAGAAGCCATTCCTTGGAGCTTCT...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATCCCCAGGAAATTAAGTaGCTCCAAGTTGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: GGFISELSKLVLDLKSGNPQEIK*LQVAPA
Trigger: GGCAGGTGCAACTTGGAGCCACTTAATTTCCTGGGG...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTACAGATGAATCTTTCTaGACAAGATGGGCTCCCTAC +
Preference number: 4 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPTDESF*TRWAPY
Trigger: GTAGGGAGCCCATCTTGTCCAGAAAGATTCATCTGT...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAGGAGGGAAAAGTCACTaGTTTAGAGCGACCTCTCAA +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEGGKSH*FRATSQ
Trigger: TTGAGAGGTCGCTCTAAACCAGTGACTTTTCCCTCC...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAATACTTCAAGGTACAGTaGACTGAGGGGTTAGAATCA +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQYFKVQ*TEGLES
Trigger: TGATTCTAACCCCTCAGTCCACTGTACCTTGAAGTA...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAAAACGGAACAGGACCTaGGAAAACGGGACTTATAGA +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAKRNRT*ENGTYR
Trigger: TCTATAAGTCCCGTTTTCCCAGGTCCTGTTCCGTTT...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
3UTR CAA 72 bp CTGTCTAAATTCCCTACAACTTCAGTTGAACTAAACTaGTCACCTGCAGATCAGATGCCCAAGTCCCATCAC +
Preference number: 4 (lower is better)
Translates to: LSKFPTTSVELN*SPADQMPKSHH
Trigger: GTGATGGGACTTGGGCATCTGATCTGCAGGTGACAAGTTTAGTTCAACTGAAGTTGTAGGGAATTTAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATAAGGCAGGTATCTCCTaGACTGCCCACGACTTTCAT +
Preference number: 4 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHKAGIS*TAHDFH
Trigger: ATGAAAGTCGTGGGCAGTTCAGGAGATACCTGCCTT...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAACATGCCAGAGCAAATaGATCCAGCTTAACCCCTTC +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSTCQSK*IQLNPF
Trigger: GAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGT...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATATGACACGTATCTGCTaGGCTACACACCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDMTRIC*ATHLLQ
Trigger: CTGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCAT...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGGTGGAACACGGACTGTaGCATACATTACCTGATAAA +
Preference number: 4 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLVEHGL*HTLPDK
Trigger: TTTATCAGGTAATGTATGTCACAGTCCGTGTTCCAC...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTGGGTCATCTATAATGTaGGTTAAATCACTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPGSSIM*VKSLSQ
Trigger: CTGGCTCAGTGATTTAACTCACATTATAGATGACCC...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATACTTTTCTGACCCTCTaGCGTCTTTATTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDTFLTL*RLYSGV
Trigger: CACCCCGGAATAAAGACGGCAGAGGGTCAGAAAAGT...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCATACTGGTCAATCATCTaGCAGTTTCAGTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAYWSII*QFQSAM
Trigger: CATTGCTGACTGAAACTGGCAGATGATTGACCAGTA...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATAACCTTTCTTCACCCTaGTGGGAATGCACATGCCAG +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDNLSSP*WECTCQ
Trigger: CTGGCATGTGCATTCCCAGCAGGGTGAAGAAAGGTT...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATACACACCAGGTCACCTaGCTCTTACCATTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNTHQVT*LLPFAV
Trigger: TACAGCAAATGGTAAGAGGCAGGTGACCTGGTGTGT...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTGGCTTTAGGAATCTaGTCTTTTGTTGGAGAGACT +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTLALGI*SFVGET
Trigger: AGTCTCTCCAACAAAAGAGCAGATTCCTAAAGCCAG...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTAAACACAAACACCCGTaGCATGTCAGCTCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSKHKHP*HVSSPL
Trigger: AAGCGGAGAGCTGACATGCCACGGGTGTTTGTGTTT...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATAAACACAAACACCCGTaGCATGTCAGCTCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDKHKHP*HVSSPL
Trigger: AAGCGGAGAGCTGACATGCCACGGGTGTTTGTGTTT...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAACAGTGGCATTGTTACTaGGGCCATCTACATTGTAGA +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEQWHCY*GHLHCR
Trigger: TCTACAATGTAGATGGCCCCAGTAACAATGCCACTG...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAACAGTGGCATTGTTACTaGGGCCATCTACATTGTAGA +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEQWHCY*GHLHCR
Trigger: TCTACAATGTAGATGGCCCCAGTAACAATGCCACTG...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAAGAAGCTCCAAGGAATaGCTTCTTGAGAAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEERSSKE*LLEKSH
Trigger: ATGGGACTTCTCAAGAAGCCATTCCTTGGAGCTTCT...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTGCACCAGCTCCACTTTaGTTTACAGCTGTAACAGAA +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLAPAPL*FTAVTE
Trigger: TTCTGTTACAGCTGTAAACCAAAGTGGAGCTGGTGC...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACACACAAATACATATGTaGACGTGTCGTGACTGGTTT +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDTQIHM*TCRDWF
Trigger: AAACCAGTCACGACACGTCCACATATGTATTTGTGT...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTTTGAATAGTACATCTTaGCTCCACGCCACACCTATG +
Preference number: 4 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLLNSTS*LHATPM
Trigger: CATAGGTGTGGCGTGGAGCCAAGATGTACTATTCAA...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACATACACTTATGGCACTTaGAACTGCACTGTATCCATG +
Preference number: 4 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATYTYGT*NCTVSM
Trigger: CATGGATACAGTGCAGTTCCAAGTGCCATAAGTGTA...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATGTTTCACTGAGTGGCTaGAGCACTCACTCAGTACGT +
Preference number: 4 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHVSLSG*STHSVR
Trigger: ACGTACTGAGTGAGTGCTCCAGCCACTCAGTGAAAC...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTACCAATCAAGAACGGTaGGCAGAAGAGCAATTCTTA +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTTNQER*AEEQFL
Trigger: TAAGAATTGCTCTTCTGCCCACCGTTCTTGATTGGT...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATGATAACAAGGCTGGGTaGAACACGGACTGTGACATA +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNDNKAG*NTDCDI
Trigger: TATGTCACAGTCCGTGTTCCACCCAGCCTTGTTATC...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATACCAGGGAAGAAGTTTaGGGCATAATGTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNTREEV*GIMLPW
Trigger: CCATGGCAACATTATGCCCCAAACTTCTTCCCTGGT...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATTCTCCAGTGGGAGGTTaGATGGTGACAGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDSPVGG*MVTDFS
Trigger: AGAAAAGTCTGTCACCATTCAACCTCCCACTGGAGA...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTCTTTCATGGGTGATGTaGTACTGGACATTAACATAC +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSLSWVM*YWTLTY
Trigger: GTATGTTAATGTCCAGTATCACATCACCCATGAAAG...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTCATGGGTGATGTaGTACTGGACATTAACATAC +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTLSWVM*YWTLTY
Trigger: GTATGTTAATGTCCAGTATCACATCACCCATGAAAG...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR TCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCACAGACAGACCACAGATaGATCTTTCTGGACAAGATG +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSQTDHR*IFLDKM
Trigger: CATCTTGTCCAGAAAGATTCATCTGTGGTCTGTCTG...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACCATGTCTTTTCAAGCTaGAGGCTAGTAATTGAAGAA +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDHVFSS*RLVIEE
Trigger: TTCTTCAATTACTAGCCTTCAGCTTGAAAAGACATG...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATACATGCCAGAGCAAATaGATCCAGCTTAACCCCTTC +
Preference number: 4 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHTCQSK*IQLNPF
Trigger: GAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGT...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACCTGTCTACTATAATGTaGACATACATTCTACCAGCC +
Preference number: 4 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHLSTIM*TYILPA
Trigger: GGCTGGTAGAATGTATGTTCACATTATAGTAGACAG...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACACAGGGTAGTGAAGTTTaGGCAGTAATTTTCTTAGAG +
Preference number: 4 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATQGSEV*AVIFLE
Trigger: CTCTAAGAAAATTACTGCTCAAACTTCACTACCCTG...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGGTGTAAATCCAAAGTaGAAGAAGAGATCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSGVNPK*KKRSCL
Trigger: GAGGCAGGATCTCTTCTTTCACTTTGGATTTACACC...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAGTCTTTCTTCCACTATaGCAAGGACAAAACGCTGAT +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEVFLPL*QGQNAD
Trigger: ATCAGCGTTTTGTCCTTGTCATAGTGGAAGAAAGAC...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTGTCTTTCTTCCACTATaGCAAGGACAAAACGCTGAT +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLVFLPL*QGQNAD
Trigger: ATCAGCGTTTTGTCCTTGTCATAGTGGAAGAAAGAC...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCATTACCTCTATAACTaGGAGGTGCTGGTAAATGAA +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTHYLYN*EVLVNE
Trigger: TTCATTTACCAGCACCTCTCAGTTATAGAGGTAATG...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTAATGAGGAGTTTGAATaGCATGGAGATAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLNEEFE*HGDKEP
Trigger: GGGCTCTTTATCTCCATGGCATTCAAACTCCTCATT...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACCTGCCTCTTACCATTTaGTGTAAAGAACTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHLPLTI*CKELVF
Trigger: GAAGACAAGTTCTTTACAGCAAATGGTAAGAGGCAG...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACATCTCATTTCGCTACTaGACTGAATACCAATCAAGA +
Preference number: 4 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDISFRY*TEYQSR
Trigger: TCTTGATTGGTATTCAGTGCAGTAGCGAAATGAGAT...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACAAGAACGGCAATGATGTaGAACTGTCTAAATTCCCTA +
Preference number: 4 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATRTAMM*NCLNSL
Trigger: TAGGGAATTTAGACAGTTGCACATCATTGCCGTTCT...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAAAACCTCAAGGAGTCTaGAAATTAGAAGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEKPQGV*KLEEEP
Trigger: TGGCTCCTCTTCTAATTTCCAGACTCCTTGAGGTTT...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAAAAAAAGACACCCCTCTaGCATAGATATATATCTCTC +
Preference number: 4 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQKKTPL*HRYISL
Trigger: GAGAGATATATATCTATGCCAGAGGGGTGTCTTTTT...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAACACAAATACATATGTaGACGTGTCGTGACTGGTTT +
Preference number: 4 (lower is better)
Translates to: KVQMVKGYWSIICQFQSATQIHM*TCRDWF
Trigger: AAACCAGTCACGACACGTCCACATATGTATTTGTGT...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTATGTACATACACTTATaGCACTTGGAACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTMYIHL*HLELHC
Trigger: ACAGTGCAGTTCCAAGTGCCATAAGTGTATGTACAT...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATACCAGGGAAGAAGTTTaGGGCATAATGTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDTREEV*GIMLPW
Trigger: CCATGGCAACATTATGCCCCAAACTTCTTCCCTGGT...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACACAAAACTGCCCCTCCTaGTTACAATGTACAGTATTA +
Preference number: 4 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATQNCPS*LQCTVL
Trigger: TAATACTGTACATTGTAACCAGGAGGGGCAGTTTTG...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTGATTATGAGGCAAAATaGGAGAGAAATCTACCACCA +
Preference number: 4 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLDYEAK*ERNLPP
Trigger: TGGTGGTAGATTTCTCTCTCATTTTGCCTCATAATC...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACAAGAGGTGCTGGTAAATaGAAAACAACTGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATRGAGK*KTTVSS
Trigger: AGATGAAACAGTTGTTTTTCATTTACCAGCACCTCT...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATAATGAGGAGTTTGAATaGCATGGAGATAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNNEEFE*HGDKEP
Trigger: GGGCTCTTTATCTCCATGGCATTCAAACTCCTCATT...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTGTCCTGTTTTACGTCTaGTCTGTCAAAAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSVLFYV*SVKSLG
Trigger: CCCAAGACTTTTGACAGAGCAGACGTAAAACAGGAC...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAATGGTCAAAGGATACTaGTCAATCATCTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEMVKGY*SIICQF
Trigger: AAACTGGCAGATGATTGACCAGTATCCTTTGACCAT...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATGCACCAGCTCCACTTTaGTTTACAGCTGTAACAGAA +
Preference number: 4 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHAPAPL*FTAVTE
Trigger: TTCTGTTACAGCTGTAAACCAAAGTGGAGCTGGTGC...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAACACAAATACATATGTaGACGTGTCGTGACTGGTTT +
Preference number: 4 (lower is better)
Translates to: DGQRILVNHLPVSVSNEETQIHM*TCRDWF
Trigger: AAACCAGTCACGACACGTCCACATATGTATTTGTGT...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGAGAACAAAAGCACCATaGTTCCATGGTATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLRTKAP*FHGMCF
Trigger: AAAACACATACCATGGAACCATGGTGCTTTTGTTCT...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATTACACTTATGGCACTTaGAACTGCACTGTATCCATG +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNYTYGT*NCTVSM
Trigger: CATGGATACAGTGCAGTTCCAAGTGCCATAAGTGTA...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATACTCAGTACGTAGGTTaGAGTGGCAAGGTAATCAAT +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNTQYVG*SGKVIN
Trigger: ATTGATTACCTTGCCACTCCAACCTACGTACTGAGT...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATTTAACACTGAAAGGCTaGGTTTTCCAGAAGGGATTC +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNLTLKG*VFQKGF
Trigger: GAATCCCTTCTGGAAAACCCAGCCTTTCAGTGTTAA...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTAGGAACAAAATAACTTaGGTGACAGGTACACTATTC +
Preference number: 4 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTRNKIT*VTGTLF
Trigger: GAATAGTGTACCTGTCACCCAAGTTATTTTGTTCCT...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTAGGAACAAAATAACTTaGGTGACAGGTACACTATTC +
Preference number: 4 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSRNKIT*VTGTLF
Trigger: GAATAGTGTACCTGTCACCCAAGTTATTTTGTTCCT...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATCGAAGGACAAATTTGTaGGATTTGGGGTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: GGFISELSKLVLDLKSGNRRTNL*DLGSMN
Trigger: GTTCATAGACCCCAAATCTCACAAATTTGTCCTTCG...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTAAGGAACTTCCAGTTTaGAGGGATCTAACGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSKELPV*RDLTAK
Trigger: TTTTGCCGTTAGATCCCTTCAAACTGGAAGTTCCTT...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATGTGGAACACGGACTGTaGCATACATTACCTGATAAA +
Preference number: 4 (lower is better)
Translates to: GGFISELSKLVLDLKSGNVEHGL*HTLPDK
Trigger: TTTATCAGGTAATGTATGTCACAGTCCGTGTTCCAC...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATTACTGGTCAATCATCTaGCAGTTTCAGTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDYWSII*QFQSAM
Trigger: CATTGCTGACTGAAACTGGCAGATGATTGACCAGTA...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR GCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTGGTCCCAGAGGAGTTTaGCATTTAATTAAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSGPRGV*HLIKAY
Trigger: GTAGGCTTTAATTAAATGGCAAACTCCTCTGGGACC...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAAAAAAGACACCCCTCTaGCATAGATATATATCTCTC +
Preference number: 4 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEKKTPL*HRYISL
Trigger: GAGAGATATATATCTATGCCAGAGGGGTGTCTTTTT...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAATGGTCAAAGGATACTaGTCAATCATCTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSMVKGY*SIICQF
Trigger: AAACTGGCAGATGATTGACCAGTATCCTTTGACCAT...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATACACAAATACATATGTaGACGTGTCGTGACTGGTTT +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNTQIHM*TCRDWF
Trigger: AAACCAGTCACGACACGTCCACATATGTATTTGTGT...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATACTCAGTACGTAGGTTaGAGTGGCAAGGTAATCAAT +
Preference number: 4 (lower is better)
Translates to: GGFISELSKLVLDLKSGNTQYVG*SGKVIN
Trigger: ATTGATTACCTTGCCACTCCAACCTACGTACTGAGT...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATAACAAAGAACAAAGATaGAGGCAGGTATCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHNKEQR*RQVSPE
Trigger: TTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTT...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATCTGTCTACTATAATGTaGACATACATTCTACCAGCC +
Preference number: 4 (lower is better)
Translates to: GGFISELSKLVLDLKSGNLSTIM*TYILPA
Trigger: GGCTGGTAGAATGTATGTTCACATTATAGTAGACAG...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATAGAGGTGCTGGTAAATaGAAAACAACTGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNRGAGK*KTTVSS
Trigger: AGATGAAACAGTTGTTTTTCATTTACCAGCACCTCT...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATTTACACAAACCGTTATaGCTCTGTCAGGTAAAGACA +
Preference number: 4 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHLHKPL*LCQVKT
Trigger: TGTCTTTACCTGACAGAGTCATAACGGTTTGTGTAA...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR TCA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATTTACACAAACCGTTATaGCTCTGTCAGGTAAAGACA +
Preference number: 4 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDLHKPL*LCQVKT
Trigger: TGTCTTTACCTGACAGAGTCATAACGGTTTGTGTAA...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTGGTTAAAGCTCAATaGAGTTATTTCAACAGTGTC +
Preference number: 4 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLLVKAQ*SYFNSV
Trigger: GACACTGTTGAAATAACTGCATTGAGCTTTAACCAA...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATTCTTTGCTGGCATCCTaGACTCTATGCAATAGTTAT +
Preference number: 4 (lower is better)
Translates to: GGFISELSKLVLDLKSGNSLLAS*TLCNSY
Trigger: ATAACTATTGCATAGAGTGCAGGATGCCAGCAAAGA...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR GCA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATTCTTTGCTGGCATCCTaGACTCTATGCAATAGTTAT +
Preference number: 4 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHSLLAS*TLCNSY
Trigger: ATAACTATTGCATAGAGTGCAGGATGCCAGCAAAGA...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATATGGTCAAAGGATACTaGTCAATCATCTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GGFISELSKLVLDLKSGNMVKGY*SIICQF
Trigger: AAACTGGCAGATGATTGACCAGTATCCTTTGACCAT...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATATGTACATACACTTATaGCACTTGGAACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: GGFISELSKLVLDLKSGNMYIHL*HLELHC
Trigger: ACAGTGCAGTTCCAAGTGCCATAAGTGTATGTACAT...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTTTTAAGATAAAAGCCTaGGGTTTGTCACCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSFKIKA*GLSPLS
Trigger: GGACAAAGGTGACAAACCCCAGGCTTTTATCTTAAA...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAAGTTGGGCAAAAATTTaGTGGTCAAGTATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSSWAKI*WSSIFS
Trigger: AGAGAAAATACTTGACCACCAAATTTTTGCCCAACT...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CCA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTATGAATGTAAGTAAATaGACCTGTACAGATGGTTGC +
Preference number: 4 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSMNVSK*TCTDGC
Trigger: GCAACCATCTGTACAGGTCCATTTACTTACATTCAT...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS GCA 90 bp CTGACAAGCCTCCACTGTGTAGAGAGCCAGCGGTCCTTGTCATATTaGAGGGTGGGGCCCGCACTGAGGTACCGTTCTAGGAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LTSLHCVESQRSLSY*RVGPALRYRSRKAL
Trigger: CAAGGCCTTCCTAGAACGGTACCTCAGTGCGGGCCCCACCCTGCAATATGACAAGGACCGCTGGCTCTCTACACAGTGGAGGCTTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACTTGGGGGTCATGCCGTaGGTGATGCAGAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYLGVMP*VMQKAR
Trigger: CCTGGCCTTCTGCATCACCAACGGCATGACCCCCAA...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCACCAGACATGAGACCTaGGACAAGCCCCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSTRHET*DKPLPL
Trigger: GAGAGGAAGGGGCTTGTCCAAGGTCTCATGTCTGGT...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS TCA 90 bp TCGCCGTTCATGTTCGGCCTCTTCATAATACAACTCGTTGTGGCTTaGGTCCCTGCGCCGAGCAGCTGCAGCAATCATGGCCCGGGACTG +
Preference number: 5 (lower is better)
Translates to: SPFMFGLFIIQLVVA*VPAPSSCSNHGPGL
Trigger: CAGTCCCGGGCCATGATTGCTGCAGCTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTGTATTATGAAGAGGCCGAACATGAACGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
ENST00000474344.1
ENST00000478369.5
CDS TCA 90 bp CTGGGGCTTTCTGCTGCTCCTCAGCCTGGAGACGCTGAATGTGGATaGAGGCCTCTTCCACTGCAACCACCAGCCTTGCTTTCCGCTTCT +
Preference number: 5 (lower is better)
Translates to: LGLSAAPQPGDAECG*RPLPLQPPALLSAS
Trigger: AGAAGCGGAAAGCAAGGCTGGTGGTTGCAGTGGAAGAGGCCTTCATCCACATTCAGCGTCTCCAGGCTGAGGAGCAGCAGAAAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACATGGAGGGCTTGCGCTaGAGGAAGGAGCAGGTACTG +
Preference number: 5 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYMEGLR*RKEQVL
Trigger: CAGTACCTGCTCCTTCCTCAAGCGCAAGCCCTCCAT...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACGAAGCAACGGGGGACTaGGTACTGGACGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYEATGD*VLDERQ
Trigger: CTGCCTTTCGTCCAGTACCAAGTCCCCCGTTGCTTC...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGCAGTTGCCAGCGTGGTaGGCATGGTTTGGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRQLPAW*AWFGLL
Trigger: AAGGAGACCAAACCATGCCAACCACGCTGGCAACTG...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAACCCAAGGCACGCATCTaGCCCAAGCCAGCAGAGTGG +
Preference number: 5 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKPKARI*PKPAEW
Trigger: CCACTCTGCTGGCTTGGGCAAGATGCGTGCCTTGGG...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACCCCCCACCCTCATCTTaGCTGGCATCCTGCACTCTA +
Preference number: 5 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYPPPSS*LASCTL
Trigger: TAGAGTGCAGGATGCCAGCAAAGATGAGGGTGGGGG...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS TCA 90 bp CCCTCCACTTTCACACCGTGTCAAGTCACACCCAGCCACTTGTGGTaGGTGTGGAGAATACGGGACCTGGCCTGCAGCAAGAATCCTCCA +
Preference number: 5 (lower is better)
Translates to: PSTFTPCQVTPSHLW*VWRIRDLACSKNPP
Trigger: TGGAGGATTCTTGCTGCAGGCCAGGTCCCGTATTCTCCACACTCACCACAAGTGGCTGGGTGTGACTTGACACGGTGTGAAAGTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474344.1
CDS-3UTR CAA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACAGAGCCCCTCACAAATaGTGCCACAAGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYRAPHK*CHKAPA
Trigger: AGCTGGAGCCTTGTGGCACAATTTGTGAGGGGCTCT...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACGACTGGCCAGTGGCATaGTTACTGGGGCCATCTACA +
Preference number: 5 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYDWPVA*LLGPST
Trigger: TGTAGATGGCCCCAGTAACAATGCCACTGGCCAGTC...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCGAGAGCCAGCGGTCCTaGTCATATTGCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: NGGLGTGRKAGISCKARLESQRS*SYCRVG
Trigger: CCCCACCCTGCAATATGACAAGGACCGCTGGCTCTC...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGCAGCCCGTCTCACACTaGCCATCTCTTACCCCATTT +
Preference number: 5 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRQPVSH*PSLTPF
Trigger: AAATGGGGTAAGAGATGGCAAGTGTGAGACGGGCTG...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAACCCAAGGCACGCATCTaGCCCAAGCCAGCAGAGTGG +
Preference number: 5 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEPKARI*PKPAEW
Trigger: CCACTCTGCTGGCTTGGGCAAGATGCGTGCCTTGGG...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCTGGCAATGTCCTCTaGGGATATGCTGTGCTCCGA +
Preference number: 5 (lower is better)
Translates to: NGGLGTGRKAGISCKARLPGNVL*GYAVLR
Trigger: TCGGAGCACAGCATATCCCAAGAGGACATTGCCAGG...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCACAACTCGTTGTGGCTaGAGTCCCTGCGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPTTRCG*SPCAEQ
Trigger: CTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTGT...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCGGCAGAGGCGATGAGTaGCACAGTGACGGTGGTCAG +
Preference number: 5 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPGRGDE*HSDGGQ
Trigger: CTGACCACCGTCACTGTGCAACTCATCGCCTCTGCC...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGGCAGCCTTCTGGACTGGTCATaGAAGATAGGGTTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: QQQLPAWLAWFGLLWQGSLLDWS*KIGLEE
Trigger: TTCTTCCAACCCTATCTTCAATGACCAGTCCAGAAG...GCTGCCCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS GCA 90 bp GATGGCCAGGTAATGGATGAAGAGGAGGGCATCCACAAGGGAGACTaGATATTGCACAATGCCCTGGTAATTCCGGTCCCGAGAGTCCAA +
Preference number: 5 (lower is better)
Translates to: DGQVMDEEEGIHKGD*ILHNALVIPVPRVQ
Trigger: TTGGACTCTCGGGACCGGAATTACCAGGGCATTGTGCAATATGCAGTCTCCCTTGTGGATGCCCTCCTCTTCATCCATTACCTGGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACATGGAGGGCTTGCGCTaGAGGAAGGAGCAGGTACTG +
Preference number: 5 (lower is better)
Translates to: GISCKARLPRSTSSTLVYMEGLR*RKEQVL
Trigger: CAGTACCTGCTCCTTCCTCAAGCGCAAGCCCTCCAT...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGCCTGGCAATGTCCTCTaGGGATATGCTGTGCTCCGA +
Preference number: 5 (lower is better)
Translates to: AGNAHARANESSLTPSGLPGNVL*GYAVLR
Trigger: TCGGAGCACAGCATATCCCAAGAGGACATTGCCAGG...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGCTGTCCTCCATGTCCTaGCTGATCCTGGCAATGTCC +
Preference number: 5 (lower is better)
Translates to: AGNAHARANESSLTPSGLLSSMS*LILAMS
Trigger: GGACATTGCCAGGATCAGCAAGGACATGGAGGACAG...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCAGCCCGGCCATATGCTaGGCTGCTCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPSPAIC*AARNLE
Trigger: CTCCAAATTCCGAGCAGCCAAGCATATGGCCGGGCT...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAAGCCCGGCCATATGCTaGGCTGCTCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLSPAIC*AARNLE
Trigger: CTCCAAATTCCGAGCAGCCAAGCATATGGCCGGGCT...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGACGTTCTAGGAAGGCCTaGGGGGTCATGCCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRRSRKA*GVMPLV
Trigger: CACCAACGGCATGACCCCCAAGGCCTTCCTAGAACG...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACGAAGCAACGGGGGACTaGGTACTGGACGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: GISCKARLPRSTSSTLVYEATGD*VLDERQ
Trigger: CTGCCTTTCGTCCAGTACCAAGTCCCCCGTTGCTTC...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGAATGCTGGGACTGACTaGAGGCTTCACACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: KAGISCKARLPRSTSSTLNAGTD*RLHTEP
Trigger: CGGCTCTGTGTGAAGCCTCAAGTCAGTCCCAGCATT...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS TCA 90 bp GTCCGAGTAGAATCATTTCCCAACAGGGGCTCTCCAGTGGGAGGTTaGATGGTGACAGACTTTTCTGACCCTCTGCCGTCTTTATTCCGG +
Preference number: 5 (lower is better)
Translates to: VRVESFPNRGSPVGG*MVTDFSDPLPSLFR
Trigger: CCGGAATAAAGACGGCAGAGGGTCAGAAAAGTCTGTCACCATTCAACCTCCCACTGGAGAGCCCCTGTTGGGAAATGATTCTACTCGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAACTCTCCAGTGGGAGGTaGAATGGTGACAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKLSSGR*NGDRLF
Trigger: GAAAAGTCTGTCACCATTCAACCTCCCACTGGAGAG...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCCTGTCCTCCATGTCCTaGCTGATCCTGGCAATGTCC +
Preference number: 5 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPLSSMS*LILAMS
Trigger: GGACATTGCCAGGATCAGCAAGGACATGGAGGACAG...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp TGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGACTTGGTACAAGGGAGACTGCATATaGCACAATGCCCTGGTAATT +
Preference number: 5 (lower is better)
Translates to: CPLEVYKWADQKQRGTWYKGDCI*HNALVI
Trigger: AATTACCAGGGCATTGTGCAATATGCAGTCTCCCTT...GTACCAAGTCCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACACAACTCGTTGTGGCTaGAGTCCCTGCGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDTTRCG*SPCAEQ
Trigger: CTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTGT...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAACAGCTTGCTCTAAGCTaGGGAAGAACTTACGTCCCC +
Preference number: 5 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEQLALS*GRTYVP
Trigger: GGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTG...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CTGGACAGCAGCAGTTGCCAGCGTGGTTGGCATGGTTTGGTCTCCTTTGGCAGGATACACTTATGGCACTaGGAACTGCACTGTATCCAT +
Preference number: 5 (lower is better)
Translates to: LDSSSCQRGWHGLVSFGRIHLWH*ELHCIH
Trigger: ATGGATACAGTGCAGTTCCAAGTGCCATAAGTGTAT...CCTGCCAAAGGAGACCAAACCATGCCAACCACGCTGGCAACTGCTGCTGTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGTTGGCTGCTCGGAATTaGGAGGCTGTTAGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: KAGISCKARLPRSTSSTLLAARN*EAVRRF
Trigger: AAACCTCCTAACAGCCTCCAAATTCCGAGCAGCCAA...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGTTGGCTGCTCGGAATTaGGAGGCTGTTAGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: AGNAHARANESSLTPSGLLAARN*EAVRRF
Trigger: AAACCTCCTAACAGCCTCCAAATTCCGAGCAGCCAA...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGAGACTGGCCAGTGGCATaGTTACTGGGGCCATCTACA +
Preference number: 5 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRDWPVA*LLGPST
Trigger: TGTAGATGGCCCCAGTAACAATGCCACTGGCCAGTC...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTTTGGGGGTCATGCCGTaGGTGATGCAGAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTLGVMP*VMQKAR
Trigger: CCTGGCCTTCTGCATCACCAACGGCATGACCCCCAA...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCGTTCTAGGAAGGCCTaGGGGGTCATGCCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTRSRKA*GVMPLV
Trigger: CACCAACGGCATGACCCCCAAGGCCTTCCTAGAACG...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTCGTTCTAGGAAGGCCTaGGGGGTCATGCCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPRSRKA*GVMPLV
Trigger: CACCAACGGCATGACCCCCAAGGCCTTCCTAGAACG...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCACGTTCTAGGAAGGCCTaGGGGGTCATGCCGTTGGTG +
Preference number: 5 (lower is better)
Translates to: KVQMVKGYWSIICQFQSARSRKA*GVMPLV
Trigger: CACCAACGGCATGACCCCCAAGGCCTTCCTAGAACG...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTGAGAGCCAGCGGTCCTaGTCATATTGCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTESQRS*SYCRVG
Trigger: CCCCACCCTGCAATATGACAAGGACCGCTGGCTCTC...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGGAATGGCTTCTaGAGAAGTCCCATCGACAAA +
Preference number: 5 (lower is better)
Translates to: NGGLGTGRKAGISCKARLPRNGF*RSPIDK
Trigger: TTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTGG...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCAGCACCAGCTCCACTTaGGTTTACAGCTGTAACAGA +
Preference number: 5 (lower is better)
Translates to: NGGLGTGRKAGISCKARLSTSST*VYSCNR
Trigger: TCTGTTACAGCTGTAAACCAAAGTGGAGCTGGTGCT...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACCGTGGTTGGCATGGTTaGGTCTCCTTTGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDRGWHG*VSFGRA
Trigger: TGCCCTGCCAAAGGAGACCAAACCATGCCAACCACG...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CAGTACGTAGGTTGGAGTGGCAAGGTAATCAATTTCTGTCAGTCCAATATGCTGACTGGACAGCAGCAGTaGCCAGCGTGGTTGGCATGG +
Preference number: 5 (lower is better)
Translates to: QYVGWSGKVINFCQSNMLTGQQQ*PAWLAW
Trigger: CCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGT...CAGCATATTGGACTGACAGAAATTGATTACCTTGCCACTCCAACCTACGTACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAAACCAAGGACTCACTTTaGTTGGTTTCACTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKTKDSL*LVSLSG
Trigger: GCCACTCAGTGAAACCAACAAAAGTGAGTCCTTGGT...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CCAAGTCCCATCACTAACTCCCTGAGCAACAAGTCTCTGGTCCCCACAGATGAAAAGAGTTTAATGGACTaGCCTGCAGGACAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: PSPITNSLSNKSLVPTDEKSLMD*PAGQQA
Trigger: AGCCTGCTGTCCTGCAGGCAAGTCCATTAAACTCTT...TTCATCTGTGGGGACCAGAGACTTGTTGCTCAGGGAGTTAGTGATGGGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCGTTTGGGGCATAATGTaGCCATGGCACCAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPVWGIM*PWHQRE
Trigger: CTCTCTCTGGTGCCATGGCAACATTATGCCCCAAAC...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCAACCAGGGAAGAAGTTaGGGGCATAATGTTGCCATG +
Preference number: 5 (lower is better)
Translates to: NGGLGTGRKAGISCKARLNQGRS*GHNVAM
Trigger: CATGGCAACATTATGCCCCAAACTTCTTCCCTGGTT...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCTTGGCTGCTCGGAATTaGGAGGCTGTTAGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPLAARN*EAVRRF
Trigger: AAACCTCCTAACAGCCTCCAAATTCCGAGCAGCCAA...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAAGCCCGGCCATATGCTaGGCTGCTCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: KVQMVKGYWSIICQFQSASPAIC*AARNLE
Trigger: CTCCAAATTCCGAGCAGCCAAGCATATGGCCGGGCT...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAACAACTCGTTGTGGCTaGAGTCCCTGCGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: DGQRILVNHLPVSVSNEETTRCG*SPCAEQ
Trigger: CTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTGT...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAAACAACTCGTTGTGGCTaGAGTCCCTGCGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: GQRILVNHLPVSVSNEEETTRCG*SPCAEQ
Trigger: CTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTGT...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGACTGCAACCACCAGCCTaGCTTTCCGCTTCTTTACTC +
Preference number: 5 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRLQPPA*LSASLL
Trigger: GAGTAAAGAAGCGGAAAGCAAGGCTGGTGGTTGCAG...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAGAGCCAGCGGTCCTaGTCATATTGCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEESQRS*SYCRVG
Trigger: CCCCACCCTGCAATATGACAAGGACCGCTGGCTCTC...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCGGAATTTTCTTCACATaGACTACGAGGCTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: NGGLGTGRKAGISCKARLGIFFT*TTRLKS
Trigger: GGACTTCAGCCTCGTAGTCAATGTGAAGAAAATTCC...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAGAAGCAACGGGGGACTaGGTACTGGACGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAEATGD*VLDERQ
Trigger: CTGCCTTTCGTCCAGTACCAAGTCCCCCGTTGCTTC...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACGAAGCAACGGGGGACTaGGTACTGGACGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHEATGD*VLDERQ
Trigger: CTGCCTTTCGTCCAGTACCAAGTCCCCCGTTGCTTC...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTACTGGACAGCAGCAGTaGCCAGCGTGGTTGGCATGG +
Preference number: 5 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLTGQQQ*PAWLAW
Trigger: CCATGCCAACCACGCTGGCAACTGCTGCTGTCCAGT...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTGGCAGAGGCGATGAGTaGCACAGTGACGGTGGTCAG +
Preference number: 5 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLGRGDE*HSDGGQ
Trigger: CTGACCACCGTCACTGTGCAACTCATCGCCTCTGCC...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CCCTCTCACTCCAACCAGGGAAGAAGTTTGGGGCATAATGTTGCCATGGCACCATGGGGTTTGTCACCTTaGTCCCCAAAGCTTAAAGTA +
Preference number: 5 (lower is better)
Translates to: PSHSNQGRSLGHNVAMAPWGLSP*SPKLKV
Trigger: TACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCA...TGGTGCCATGGCAACATTATGCCCCAAACTTCTTCCCTGGTTGGAGTGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTCCCCCACCCTCATCTTaGCTGGCATCCTGCACTCTA +
Preference number: 5 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSPPPSS*LASCTL
Trigger: TAGAGTGCAGGATGCCAGCAAAGATGAGGGTGGGGG...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAAACAAATTCTGCCTGTaGCGCTCTCCGAGGCGCAAC +
Preference number: 5 (lower is better)
Translates to: KVQMVKGYWSIICQFQSANKFCL*RSPRRN
Trigger: GTTGCGCCTCGGAGAGCGCAACAGGCAGAATTTGTT...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310260.7
CDS-3UTR CAA 90 bp AATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTATGGAGGGCTTGCGCTaGAGGAAGGAGCAGGTACTG +
Preference number: 5 (lower is better)
Translates to: NGFLRSPIDKSQMSSVTLMEGLR*RKEQVL
Trigger: CAGTACCTGCTCCTTCCTCAAGCGCAAGCCCTCCAT...AAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTCCTGGCAATGTCCTCTaGGGATATGCTGTGCTCCGA +
Preference number: 5 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSPGNVL*GYAVLR
Trigger: TCGGAGCACAGCATATCCCAAGAGGACATTGCCAGG...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACAGAGCCCCTCACAAATaGTGCCACAAGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHRAPHK*CHKAPA
Trigger: AGCTGGAGCCTTGTGGCACAATTTGTGAGGGGCTCT...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAAGAGCCCCTCACAAATaGTGCCACAAGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: KVQMVKGYWSIICQFQSARAPHK*CHKAPA
Trigger: AGCTGGAGCCTTGTGGCACAATTTGTGAGGGGCTCT...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GCCAGCAGAGGGGTGGGATCAGAAACAGGGCAGGTAGGTTTTCTCTTTGGGAAAAGCAGAATGAGGAGTTaGAATGCCATGGAGATAAAG +
Preference number: 5 (lower is better)
Translates to: ASRGVGSETGQVGFLFGKSRMRS*NAMEIK
Trigger: CTTTATCTCCATGGCATTCAAACTCCTCATTCTGCT...TTTCCCAAAGAGAAAACCTACCTGCCCTGTTTCTGATCCCACCCCTCTGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACCTGCAACCACCAGCCTaGCTTTCCGCTTCTTTACTC +
Preference number: 5 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDLQPPA*LSASLL
Trigger: GAGTAAAGAAGCGGAAAGCAAGGCTGGTGGTTGCAG...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCATTGGGGGTCATGCCGTaGGTGATGCAGAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSLGVMP*VMQKAR
Trigger: CCTGGCCTTCTGCATCACCAACGGCATGACCCCCAA...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTAAGCACCAGCTCCACTTaGGTTTACAGCTGTAACAGA +
Preference number: 5 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLSTSST*VYSCNR
Trigger: TCTGTTACAGCTGTAAACCAAAGTGGAGCTGGTGCT...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAACGTGGTTGGCATGGTTaGGTCTCCTTTGGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: DGQRILVNHLPVSVSNEERGWHG*VSFGRA
Trigger: TGCCCTGCCAAAGGAGACCAAACCATGCCAACCACG...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AAGGCAGGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGCTTCTGGACTGGTCATaGAAGATAGGGTTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: KAGISCKARLPRSTSSTLLLDWS*KIGLEE
Trigger: TTCTTCCAACCCTATCTTCAATGACCAGTCCAGAAG...CAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp TTGGCAGGGCAGCTTGCTCTAAGCTTGGGAAGAACTTACGTCCCCAGGAAATTACACTCAGTACGTAGGTaGGAGTGGCAAGGTAATCAA +
Preference number: 5 (lower is better)
Translates to: LAGQLALSLGRTYVPRKLHSVRR*EWQGNQ
Trigger: TTGATTACCTTGCCACTCCAACCTACGTACTGAGTG...TAATTTCCTGGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTGCCCTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CCTAAGGCAACAAAGAACAAAGATGAAGGCAGGTATCTCCTGAACTGCCCACGAACAGCAGGACCCAGATaGGAAGGTAAACCAAGGACT +
Preference number: 5 (lower is better)
Translates to: PKATKNKDEGRYLLNCPRTAGPR*EGKPRT
Trigger: AGTCCTTGGTTTACCTTCCAATCTGGGTCCTGCTGT...TCGTGGGCAGTTCAGGAGATACCTGCCTTCATCTTTGTTCTTTGTTGCCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTACCAGACATGAGACCTaGGACAAGCCCCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPTRHET*DKPLPL
Trigger: GAGAGGAAGGGGCTTGTCCAAGGTCTCATGTCTGGT...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACGTTTGGGGCATAATGTaGCCATGGCACCAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDVWGIM*PWHQRE
Trigger: CTCTCTCTGGTGCCATGGCAACATTATGCCCCAAAC...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACGAACTCACTCAGGCCTaGTCATACACATATGGTGAC +
Preference number: 5 (lower is better)
Translates to: GISCKARLPRSTSSTLVYELTQA*SYTYGD
Trigger: GTCACCATATGTGTATGACAAGGCCTGAGTGAGTTC...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGGACCTGTACAGATGGTaGCTGGTAGTGTCATTCATT +
Preference number: 5 (lower is better)
Translates to: AGNAHARANESSLTPSGLDLYRW*LVVSFI
Trigger: AATGAATGACACTACCAGCAACCATCTGTACAGGTC...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTGTGGTCTCTCCCCAGTaGTCATCTTCCTCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTVVSPQ*SSSSVR
Trigger: TCGGACAGAGGAAGATGACAACTGGGGAGAGACCAC...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369510.8
CDS-3UTR CAA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAACTGTCCTCCATGTCCTaGCTGATCCTGGCAATGTCC +
Preference number: 5 (lower is better)
Translates to: DGQRILVNHLPVSVSNEELSSMS*LILAMS
Trigger: GGACATTGCCAGGATCAGCAAGGACATGGAGGACAG...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACAAGGGAGACTGCATATaGCACAATGCCCTGGTAATT +
Preference number: 5 (lower is better)
Translates to: GISCKARLPRSTSSTLVYKGDCI*HNALVI
Trigger: AATTACCAGGGCATTGTGCAATATGCAGTCTCCCTT...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATAGCCCGGCCATATGCTaGGCTGCTCGGAATTTGGAG +
Preference number: 5 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNSPAIC*AARNLE
Trigger: CTCCAAATTCCGAGCAGCCAAGCATATGGCCGGGCT...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATTTGGGGGTCATGCCGTaGGTGATGCAGAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDLGVMP*VMQKAR
Trigger: CCTGGCCTTCTGCATCACCAACGGCATGACCCCCAA...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATGAGAGCCAGCGGTCCTaGTCATATTGCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHESQRS*SYCRVG
Trigger: CCCCACCCTGCAATATGACAAGGACCGCTGGCTCTC...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCGGAATTTTCTTCACATaGACTACGAGGCTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPGIFFT*TTRLKS
Trigger: GGACTTCAGCCTCGTAGTCAATGTGAAGAAAATTCC...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAAATGCTGGGACTGACTaGAGGCTTCACACAGAGCCG +
Preference number: 5 (lower is better)
Translates to: DGQRILVNHLPVSVSNEENAGTD*RLHTEP
Trigger: CGGCTCTGTGTGAAGCCTCAAGTCAGTCCCAGCATT...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCACAGCTTGCTCTAAGCTaGGGAAGAACTTACGTCCCC +
Preference number: 5 (lower is better)
Translates to: KVQMVKGYWSIICQFQSAQLALS*GRTYVP
Trigger: GGGGACGTAAGTTCTTCCCAAGCTTAGAGCAAGCTG...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAATGGGATGCAAACTGCTaGCTGAGAACACCTACGTCA +
Preference number: 5 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQWDANC*LRTPTS
Trigger: TGACGTAGGTGTTCTCAGCAAGCAGTTTGCATCCCA...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GGAATTAGTTGTAAGGCGAGGCTCCCAAGAAGCACCAGCTCCACTTTGGTTTACTGGGGTTTGTCACCTTaGTCCCCAAAGCTTAAAGTA +
Preference number: 5 (lower is better)
Translates to: GISCKARLPRSTSSTLVYWGLSP*SPKLKV
Trigger: TACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCA...GTAAACCAAAGTGGAGCTGGTGCTTCTTGGGAGCCTCGCCTTACAACTAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACCTCTCCAGTGGGAGGTaGAATGGTGACAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHLSSGR*NGDRLF
Trigger: GAAAAGTCTGTCACCATTCAACCTCCCACTGGAGAG...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp CCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACAGCCCAGCAGAATGAGGAGTTaGAATGCCATGGAGATAAAG +
Preference number: 5 (lower is better)
Translates to: PIDKSQMSSVTLFQGGQPSRMRS*NAMEIK
Trigger: CTTTATCTCCATGGCATTCAAACTCCTCATTCTGCT...GGGCTGTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATGACTGGCCAGTGGCATaGTTACTGGGGCCATCTACA +
Preference number: 5 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNDWPVA*LLGPST
Trigger: TGTAGATGGCCCCAGTAACAATGCCACTGGCCAGTC...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAACTGCAACCACCAGCCTaGCTTTCCGCTTCTTTACTC +
Preference number: 5 (lower is better)
Translates to: DGQRILVNHLPVSVSNEELQPPA*LSASLL
Trigger: GAGTAAAGAAGCGGAAAGCAAGGCTGGTGGTTGCAG...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACCCAAGGAATGGCTTCTaGAGAAGTCCCATCGACAAA +
Preference number: 5 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDPRNGF*RSPIDK
Trigger: TTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTGG...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTCAGCCCGTCTCACACTaGCCATCTCTTACCCCATTT +
Preference number: 5 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLQPVSH*PSLTPF
Trigger: AAATGGGGTAAGAGATGGCAAGTGTGAGACGGGCTG...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GCTGGGAATGCACATGCCAGAGCAAATGAATCCAGCTTAACCCCTTCTGGACTGCAAGCTATAAAGAGGTaGAAAGTGCAAAGGCTTTAC +
Preference number: 5 (lower is better)
Translates to: AGNAHARANESSLTPSGLQAIKR*KVQRLY
Trigger: GTAAAGCCTTTGCACTTTCAACCTCTTTATAGCTTG...CAGTCCAGAAGGGGTTAAGCTGGATTCATTTGCTCTGGCATGTGCATTCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACACTCAGTACGTAGGTaGGAGTGGCAAGGTAATCAA +
Preference number: 5 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQHSVRR*EWQGNQ
Trigger: TTGATTACCTTGCCACTCCAACCTACGTACTGAGTG...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACATGGGATGCAAACTGCTaGCTGAGAACACCTACGTCA +
Preference number: 5 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATWDANC*LRTPTS
Trigger: TGACGTAGGTGTTCTCAGCAAGCAGTTTGCATCCCA...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AACGGGGGACTTGGTACTGGACGAAAGGCAGGAATTAGTTGTAAGGCGAGGCTCTGTTGGAAATCAAATTaGGCTAATCACGCCATAACT +
Preference number: 5 (lower is better)
Translates to: NGGLGTGRKAGISCKARLCWKSN*ANHAIT
Trigger: AGTTATGGCGTGATTAGCCAAATTTGATTTCCAACA...GAGCCTCGCCTTACAACTAATTCCTGCCTTTCGTCCAGTACCAAGTCCCCCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp ATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAACGGGGGAAGGAACAAAATAACTaGGGTGACAGGTACACTATT +
Preference number: 5 (lower is better)
Translates to: IKMCPLEVYKWADQKQRGKEQNN*GDRYTI
Trigger: AATAGTGTACCTGTCACCCAAGTTATTTTGTTCCTT...CCCCCGTTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTCTGTCCTCCATGTCCTaGCTGATCCTGGCAATGTCC +
Preference number: 5 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSLSSMS*LILAMS
Trigger: GGACATTGCCAGGATCAGCAAGGACATGGAGGACAG...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATAGAGCCCCTCACAAATaGTGCCACAAGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDRAPHK*CHKAPA
Trigger: AGCTGGAGCCTTGTGGCACAATTTGTGAGGGGCTCT...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTCCAAGGAATGGCTTCTaGAGAAGTCCCATCGACAAA +
Preference number: 5 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPPRNGF*RSPIDK
Trigger: TTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTGG...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTAGCACCAGCTCCACTTaGGTTTACAGCTGTAACAGA +
Preference number: 5 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPSTSST*VYSCNR
Trigger: TCTGTTACAGCTGTAAACCAAAGTGGAGCTGGTGCT...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGCCTGGGGTTTGTCACCTTTGTCCCCAAAGCTTAAAGTAAGTGTCTTTCTTACAGCAGGACCCAGATaGGAAGGTAAACCAAGGACT +
Preference number: 5 (lower is better)
Translates to: KAWGLSPLSPKLKVSVFLTAGPR*EGKPRT
Trigger: AGTCCTTGGTTTACCTTCCAATCTGGGTCCTGCTGT...AAGAAAGACACTTACTTTAAGCTTTGGGGACAAAGGTGACAAACCCCAGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GAAGCTTTCCAAGGGACAAGGTGTAAATCCAAAGTGAAAGAAGAGATCCTGCCTAACCAGGGAAGAAGTTaGGGGCATAATGTTGCCATG +
Preference number: 5 (lower is better)
Translates to: EAFQGTRCKSKVKEEILPNQGRS*GHNVAM
Trigger: CATGGCAACATTATGCCCCAAACTTCTTCCCTGGTT...AGGCAGGATCTCTTCTTTCACTTTGGATTTACACCTTGTCCCTTGGAAAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACGAACTCACTCAGGCCTaGTCATACACATATGGTGAC +
Preference number: 5 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHELTQA*SYTYGD
Trigger: GTCACCATATGTGTATGACAAGGCCTGAGTGAGTTC...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTTTTTCAGGGTGGACGACCTGTACAGATGGTaGCTGGTAGTGTCATTCATT +
Preference number: 5 (lower is better)
Translates to: EVPSTKVRCHQSLFFRVDDLYRW*LVVSFI
Trigger: AATGAATGACACTACCAGCAACCATCTGTACAGGTC...GTCCACCCTGAAAAAGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTTTATTCCGGGGTGACTaGTGTCTCTCTCTAGTTCTT +
Preference number: 5 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTLFRGD*CLSLVL
Trigger: AAGAACTAGAGAGAGACACAAGTCACCCCGGAATAA...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AACAGAATAAAGATGTGTCCCCTGGAAGTCTACAAGTGGGCTGACCAGAAGCAAAGCAGAATGAGGAGTTaGAATGCCATGGAGATAAAG +
Preference number: 5 (lower is better)
Translates to: NRIKMCPLEVYKWADQKQSRMRS*NAMEIK
Trigger: CTTTATCTCCATGGCATTCAAACTCCTCATTCTGCT...TTGCTTCTGGTCAGCCCACTTGTAGACTTCCAGGGGACACATCTTTATTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACAGGAATTTTCTTCACATaGACTACGAGGCTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATGIFFT*TTRLKS
Trigger: GGACTTCAGCCTCGTAGTCAATGTGAAGAAAATTCC...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAACCAAGGAATGGCTTCTaGAGAAGTCCCATCGACAAA +
Preference number: 5 (lower is better)
Translates to: GQRILVNHLPVSVSNEEEPRNGF*RSPIDK
Trigger: TTTGTCGATGGGACTTCTCAAGAAGCCATTCCTTGG...TTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATATGGTTTGGTCTCCTTaGGCAGGGCAGCTTGCTCTA +
Preference number: 5 (lower is better)
Translates to: GGFISELSKLVLDLKSGNMVWSP*AGQLAL
Trigger: TAGAGCAAGCTGCCCTGCCAAAGGAGACCAAACCAT...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATAAGAGTTTAATGGACTaGCCTGCAGGACAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNKSLMD*PAGQQA
Trigger: AGCCTGCTGTCCTGCAGGCAAGTCCATTAAACTCTT...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATCTCTCCAGTGGGAGGTaGAATGGTGACAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDLSSGR*NGDRLF
Trigger: GAAAAGTCTGTCACCATTCAACCTCCCACTGGAGAG...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAAGCAGAATGAGGAGTTaGAATGCCATGGAGATAAAG +
Preference number: 5 (lower is better)
Translates to: KVQMVKGYWSIICQFQSASRMRS*NAMEIK
Trigger: CTTTATCTCCATGGCATTCAAACTCCTCATTCTGCT...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAAAGGGAGACTGCATATaGCACAATGCCCTGGTAATT +
Preference number: 5 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEKGDCI*HNALVI
Trigger: AATTACCAGGGCATTGTGCAATATGCAGTCTCCCTT...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAAGAATAGCACCAGCTCCACTTaGGTTTACAGCTGTAACAGA +
Preference number: 5 (lower is better)
Translates to: VKGYWSIICQFQSAMKKNSTSST*VYSCNR
Trigger: TCTGTTACAGCTGTAAACCAAAGTGGAGCTGGTGCT...ATTCTTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp AAGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACATACACTTATGGCACTaGGAACTGCACTGTATCCAT +
Preference number: 5 (lower is better)
Translates to: KEWLLEKSHRQKSDVISHIHLWH*ELHCIH
Trigger: ATGGATACAGTGCAGTTCCAAGTGCCATAAGTGTAT...GTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CACAAATACATATGTGGACGTGTCGTGACTGGTTTCCTGAAACAGAATAAAGATAACAGCATCCCTGTCTaGCAGCAGGTGTTAACACTG +
Preference number: 5 (lower is better)
Translates to: HKYICGRVVTGFLKQNKDNSIPV*QQVLTL
Trigger: CAGTGTTAACACCTGCTGCAAGACAGGGATGCTGTT...ATCTTTATTCTGTTTCAGGAAACCAGTCACGACACGTCCACATATGTATTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTAACAGCATCCCTGTCTaGCAGCAGGTGTTAACACTG +
Preference number: 5 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSNSIPV*QQVLTL
Trigger: CAGTGTTAACACCTGCTGCAAGACAGGGATGCTGTT...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCATCAGTTGAACTAAACTaGTCACCTGCAGATCAGATG +
Preference number: 5 (lower is better)
Translates to: KVQMVKGYWSIICQFQSASVELN*SPADQM
Trigger: CATCTGATCTGCAGGTGACAAGTTTAGTTCAACTGA...TGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACATCAGTAGCATTTCTGTaGAGGAAGGGGTCATCTATA +
Preference number: 5 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATSVAFL*RKGSSI
Trigger: TATAGATGACCCCTTCCTCAACAGAAATGCTACTGA...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGGAATTTTCTTCACATaGACTACGAGGCTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSGIFFT*TTRLKS
Trigger: GGACTTCAGCCTCGTAGTCAATGTGAAGAAAATTCC...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS-3UTR CAA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTCAAGCTATAAAGAGGTaGAAAGTGCAAAGGCTTTAC +
Preference number: 5 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSQAIKR*KVQRLY
Trigger: GTAAAGCCTTTGCACTTTCAACCTCTTTATAGCTTG...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp CTGACATATAAATGTGCTATCCGTCTGGTAATACACTCAGAGAAATGCTCACATACCAAGGACTCACTTTaGTTGGTTTCACTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: LTYKCAIRLVIHSEKCSHTKDSL*LVSLSG
Trigger: GCCACTCAGTGAAACCAACAAAAGTGAGTCCTTGGT...ATGTGAGCATTTCTCTGAGTGTATTACCAGACGGATAGCACATTTATATGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AGGAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTAAGATGACTCCTATCTaGAAAGAATGTGGGGATAAC +
Preference number: 5 (lower is better)
Translates to: RNGFLRSPIDKSQMSSVTKMTPI*KECGDN
Trigger: GTTATCCCCACATTCTTTCAAGATAGGAGTCATCTT...AGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATAAGGGAGACTGCATATaGCACAATGCCCTGGTAATT +
Preference number: 5 (lower is better)
Translates to: GGFISELSKLVLDLKSGNKGDCI*HNALVI
Trigger: AATTACCAGGGCATTGTGCAATATGCAGTCTCCCTT...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCAGCAATGAAGAATTTCTGAGCATACACTaGGTTAAAGCTCAATGCAGT +
Preference number: 5 (lower is better)
Translates to: DGQRILVNHLPVSVSNEEFLSIH*VKAQCS
Trigger: ACTGCATTGAGCTTTAACCAAGTGTATGCTCAGAAA...TTCTTCATTGCTGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GAATGGCTTCTTGAGAAGTCCCATCGACAAAAGTCAGATGTCATCAGTCACTCTAGTCTTGGTGCCATATaGAAAGAAACTTTTCACAGT +
Preference number: 5 (lower is better)
Translates to: EWLLEKSHRQKSDVISHSSLGAI*KETFHS
Trigger: ACTGTGAAAAGTTTCTTTCAATATGGCACCAAGACT...AGAGTGACTGATGACATCTGACTTTTGTCGATGGGACTTCTCAAGAAGCCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCATCAGTTGAACTAAACTaGTCACCTGCAGATCAGATG +
Preference number: 5 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSSVELN*SPADQM
Trigger: CATCTGATCTGCAGGTGACAAGTTTAGTTCAACTGA...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp ACACTCAGCTATATACACAATGACACGTATCTGCTGAGCTACACACCTGCTACAAAGGAACAAAATAACTaGGGTGACAGGTACACTATT +
Preference number: 5 (lower is better)
Translates to: TLSYIHNDTYLLSYTPATKEQNN*GDRYTI
Trigger: AATAGTGTACCTGTCACCCAAGTTATTTTGTTCCTT...TGTAGCAGGTGTGTAGCTCAGCAGATACGTGTCATTGTGTATATAGCTGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATTTTCTGAGCATACACTaGGTTAAAGCTCAATGCAGT +
Preference number: 5 (lower is better)
Translates to: GGFISELSKLVLDLKSGNFLSIH*VKAQCS
Trigger: ACTGCATTGAGCTTTAACCAAGTGTATGCTCAGAAA...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GTTAAAACATCACCAGGGAAGAGAGCAATCTCAGATATAGACTCCTCATTAAGTAAGATGACTCCTATCTaGAAAGAATGTGGGGATAAC +
Preference number: 5 (lower is better)
Translates to: VKTSPGKRAISDIDSSLSKMTPI*KECGDN
Trigger: GTTATCCCCACATTCTTTCAAGATAGGAGTCATCTT...ACTTAATGAGGAGTCTATATCTGAGATTGCTCTCTTCCCTGGTGATGTTTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp AATAAAGTGCAGATGGTCAAAGGATACTGGTCAATCATCTGCCAGTTTCAGTCATGTTGGAAATCAAATTaGGCTAATCACGCCATAACT +
Preference number: 5 (lower is better)
Translates to: NKVQMVKGYWSIICQFQSCWKSN*ANHAIT
Trigger: AGTTATGGCGTGATTAGCCAAATTTGATTTCCAACA...TGACTGAAACTGGCAGATGATTGACCAGTATCCTTTGACCATCTGCACTTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS-3UTR CAA 90 bp GGTGGTTTCATCTCTGAACTTTCTAAATTGGTGCTGGACTTGAAATCAGGAAATAGTCTTGGTGCCATATaGAAAGAAACTTTTCACAGT +
Preference number: 5 (lower is better)
Translates to: GGFISELSKLVLDLKSGNSLGAI*KETFHS
Trigger: ACTGTGAAAAGTTTCTTTCAATATGGCACCAAGACT...ATTTCCTGATTTCAAGTCCAGCACCAATTTAGAAAGTTCAGAGATGAAACCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355485.7
ENST00000369510.8
CDS GCA 72 bp TCTGGGCTCCGGGCGCAAGGCTGTGGGCAGACGCCGTaGGAGGGAAGCCATCCCAGCTGTAGCCGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SGLRAQGCGQTP*EGSHPSCSRWQ
Trigger: CTGCCAGCGGCTACAGCTGGGATGGCTTCCCTCGCACGGCGTCTGCCCACAGCCTTGCGCCCGGAGCCCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478369.5
CDS TCA 72 bp CCTGGGGCTTTCTGCTGCTCCTCAGCCTGGAGACGCTaGATGTGGATGAAGGCCTCTTCCACTGCAACCACC +
Preference number: 6 (lower is better)
Translates to: PGAFCCSSAWRR*MWMKASSTATT
Trigger: GGTGGTTGCAGTGGAAGAGGCCTTCATCCACATTCAGCGTCTCCAGGCTGAGGAGCAGCAGAAAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS GCA 72 bp CTCCACTGTGTAGAGAGCCAGCGGTCCTTGTCATATTaGAGGGTGGGGCCCGCACTGAGGTACCGTTCTAGG +
Preference number: 6 (lower is better)
Translates to: LHCVESQRSLSY*RVGPALRYRSR
Trigger: CCTAGAACGGTACCTCAGTGCGGGCCCCACCCTGCAATATGACAAGGACCGCTGGCTCTCTACACAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS CAA 90 bp GCCTCATCACTGACAAGCCTCCACTGTGTAGAGAGCCAGCGGTCCTaGTCATATTGCAGGGTGGGGCCCGCACTGAGGTACCGTTCTAGG +
Preference number: 6 (lower is better)
Translates to: ASSLTSLHCVESQRS*SYCRVGPALRYRSR
Trigger: CCTAGAACGGTACCTCAGTGCGGGCCCCACCCTGCAATATGACAAGGACCGCTGGCTCTCTACACAGTGGAGGCTTGTCAGTGATGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS CAA 90 bp CTCGCCGTTCATGTTCGGCCTCTTCATAATACAACTCGTTGTGGCTaGAGTCCCTGCGCCGAGCAGCTGCAGCAATCATGGCCCGGGACT +
Preference number: 6 (lower is better)
Translates to: LAVHVRPLHNTTRCG*SPCAEQLQQSWPGT
Trigger: AGTCCCGGGCCATGATTGCTGCAGCTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTGTATTATGAAGAGGCCGAACATGAACGGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
ENST00000474344.1
ENST00000478369.5
CDS TCA 72 bp TTCACACCGTGTCAAGTCACACCCAGCCACTTGTGGTaGGTGTGGAGAATACGGGACCTGGCCTGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: FTPCQVTPSHLW*VWRIRDLACSK
Trigger: CTTGCTGCAGGCCAGGTCCCGTATTCTCCACACTCACCACAAGTGGCTGGGTGTGACTTGACACGGTGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474344.1
CDS GCA 72 bp TTGCTGATCCTGGCAATGTCCTCTTGGGATATGCTGTaGTCCGAGGTGCCTGTGATGGCCGTGGTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: LLILAMSSWDML*SEVPVMAVVVS
Trigger: AGAGACCACCACGGCCATCACAGGCACCTCGGAGCACAGCATATCCCAAGAGGACATTGCCAGGATCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS GCA 72 bp CCTCTTCATAATACAACTCGTTGTGGCTTGAGTCCCTaGGCCGAGCAGCTGCAGCAATCATGGCCCGGGACT +
Preference number: 6 (lower is better)
Translates to: PLHNTTRCGLSP*AEQLQQSWPGT
Trigger: AGTCCCGGGCCATGATTGCTGCAGCTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTGTATTATGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
ENST00000474344.1
ENST00000478369.5
CDS TCA 72 bp ATGTTCGGCCTCTTCATAATACAACTCGTTGTGGCTTaGGTCCCTGCGCCGAGCAGCTGCAGCAATCATGGC +
Preference number: 6 (lower is better)
Translates to: MFGLFIIQLVVA*VPAPSSCSNHG
Trigger: GCCATGATTGCTGCAGCTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTGTATTATGAAGAGGCCGAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
ENST00000474344.1
ENST00000478369.5
CDS GCA 72 bp GGAGGGCATCCACAAGGGAGACTGCATATTGCACAATaGCCTGGTAATTCCGGTCCCGAGAGTCCAAAATGC +
Preference number: 6 (lower is better)
Translates to: GGHPQGRLHIAQ*PGNSGPESPKC
Trigger: GCATTTTGGACTCTCGGGACCGGAATTACCAGGGCATTGTGCAATATGCAGTCTCCCTTGTGGATGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS GCA 72 bp CTGGAGACGCTGAATGTGGATGAAGGCCTCTTCCACTaGAACCACCAGCCTTGCTTTCCGCTTCTTTACTCG +
Preference number: 6 (lower is better)
Translates to: LETLNVDEGLFH*NHQPCFPLLYS
Trigger: CGAGTAAAGAAGCGGAAAGCAAGGCTGGTGGTTGCAGTGGAAGAGGCCTTCATCCACATTCAGCGTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS CAA 72 bp GATGAAGAGGAGGGCATCCACAAGGGAGACTGCATATaGCACAATGCCCTGGTAATTCCGGTCCCGAGAGTC +
Preference number: 6 (lower is better)
Translates to: DEEEGIHKGDCI*HNALVIPVPRV
Trigger: GACTCTCGGGACCGGAATTACCAGGGCATTGTGCAATATGCAGTCTCCCTTGTGGATGCCCTCCTCTTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS CAA 72 bp CATGTTCGGCCTCTTCATAATACAACTCGTTGTGGCTaGAGTCCCTGCGCCGAGCAGCTGCAGCAATCATGG +
Preference number: 6 (lower is better)
Translates to: HVRPLHNTTRCG*SPCAEQLQQSW
Trigger: CCATGATTGCTGCAGCTGCTCGGCGCAGGGACTCAAGCCACAACGAGTTGTATTATGAAGAGGCCGAACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
ENST00000474344.1
ENST00000478369.5
CDS TCA 72 bp TTCCCAACAGGGGCTCTCCAGTGGGAGGTTGAATGGTaGCAGACTTTTCTGACCCTCTGCCGTCTTTATTCC +
Preference number: 6 (lower is better)
Translates to: FPTGALQWEVEW*QTFLTLCRLYS
Trigger: GGAATAAAGACGGCAGAGGGTCAGAAAAGTCTGTCACCATTCAACCTCCCACTGGAGAGCCCCTGTTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS CAA 90 bp CAGGTAATGGATGAAGAGGAGGGCATCCACAAGGGAGACTGCATATaGCACAATGCCCTGGTAATTCCGGTCCCGAGAGTCCAAAATGCG +
Preference number: 6 (lower is better)
Translates to: QVMDEEEGIHKGDCI*HNALVIPVPRVQNA
Trigger: CGCATTTTGGACTCTCGGGACCGGAATTACCAGGGCATTGTGCAATATGCAGTCTCCCTTGTGGATGCCCTCCTCTTCATCCATTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS CAA 72 bp GTGGATTCGGTATCCATAGCAATGGAGGGCTTGCGCTaGAGGAAGGAGCAGGTACTGTTTCTCCTTAGAGGT +
Preference number: 6 (lower is better)
Translates to: VDSVSIAMEGLR*RKEQVLFLLRG
Trigger: ACCTCTAAGGAGAAACAGTACCTGCTCCTTCCTCAAGCGCAAGCCCTCCATTGCTATGGATACCGAATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369510.8
CDS CCA 72 bp CATCTACATTGTAGACTTTCAGCCCGGCCATATGCTTaGCTGCTCGGAATTTGGAGGCTGTTAGGAGGTTTG +
Preference number: 6 (lower is better)
Translates to: HLHCRLSARPYA*LLGIWRLLGGL
Trigger: CAAACCTCCTAACAGCCTCCAAATTCCGAGCAGCCAAGCATATGGCCGGGCTGAAAGTCTACAATGTAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
ENST00000474344.1
ENST00000478369.5
CDS CAA 72 bp AAAAGTGCCCAGGTCCCTATGAGCAGAATGAGGAGTTaGAATGCCATGGAGATAAAGAGCCCCTCACAAATT +
Preference number: 6 (lower is better)
Translates to: KSAQVPMSRMRS*NAMEIKSPSQI
Trigger: AATTTGTGAGGGGCTCTTTATCTCCATGGCATTCAAACTCCTCATTCTGCTCATAGGGACCTGGGCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8
CDS CCA 72 bp ATTTCACCTACCAGACTCCTAAAACCTCAAGGAGTCTaGAAATTAGAAGAGGAGCCACTCTTCAACAGGAAC +
Preference number: 6 (lower is better)
Translates to: ISPTRLLKPQGV*KLEEEPLFNRN
Trigger: GTTCCTGTTGAAGAGTGGCTCCTCTTCTAATTTCCAGACTCCTTGAGGTTTTAGGAGTCTGGTAGGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369510.8
CDS CAA 90 bp TCTATGAACTCTTCAGAGAGTATGATGAATGGAATTTTCTTCACATaGACTACGAGGCTGAAGTCCAAGCACTTAAGGACGAACACAATT +
Preference number: 6 (lower is better)
Translates to: SMNSSESMMNGIFFT*TTRLKSKHLRTNTI
Trigger: AATTGTGTTCGTCCTTAAGTGCTTGGACTTCAGCCTCGTAGTCAATGTGAAGAAAATTCCATTCATCATACTCTCTGAAGAGTTCATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310260.7
ENST00000355485.7
ENST00000369509.1
ENST00000369510.8