RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP37 (Homo sapiens)

Ensembl gene IDs: ENSG00000135913

Ensembl transcript IDs: ENST00000258399.8, ENST00000338465.5, ENST00000415516.5, ENST00000418019.5, ENST00000454775.5, ENST00000473554.5, ENST00000475553.1, ENST00000478329.1, ENST00000484018.1, ENST00000486242.1

Found 643 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAAAGAAAAGCTCAAAGGGAGGGAAACCTGGGGACAAGAGGTGTaGACACCCACATGTGGTCTCACTCTTCACACAGGCCCACTATTT +
Preference number: 1 (lower is better)
Translates to: GKEKLKGRETWGQEV*TPTCGLTLHTGPLF
Trigger: AAATAGTGGGCCTGTGTGAAGAGTGAGACCACATGTGGGTGTGCACACCTCTTGTCCCCAGGTTTCCCTCCCTTTGAGCTTTTCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR CCA 90 bp CAAAGGGAGGGAAACCTGGGGACAAGAGGTGTGCACACCCACATGTaGTCTCACTCTTCACACAGGCCCACTATTTTTGAAGTAGACCAG +
Preference number: 1 (lower is better)
Translates to: QREGNLGTRGVHTHM*SHSSHRPTIFEVDQ
Trigger: CTGGTCTACTTCAAAAATAGTGGGCCTGTGTGAAGAGTGAGACCACATGTGGGTGTGCACACCTCTTGTCCCCAGGTTTCCCTCCCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR CCA 90 bp TTAGTTGACTGTTCTTCTTTGTTCTGGCATCTGACTGGACCAACCTaGAACCTGGTCCAGACCCTCACCCACTCTATTCTTATGCCAATG +
Preference number: 1 (lower is better)
Translates to: LVDCSSLFWHLTGPT*NLVQTLTHSILMPM
Trigger: CATTGGCATAAGAATAGAGTGGGTGAGGGTCTGGACCAGGTTCCAGGTTGGTCCAGTCAGATGCCAGAACAAAGAAGAACAGTCAACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR TCA 90 bp GAAGTGCCACTCATAGGAGAAAAAGAGGATAATCAGCTACGGATGTaGGACCAAAGTTTCCATAAAATAGCATGGAGCATTCTACGTTAC +
Preference number: 1 (lower is better)
Translates to: EVPLIGEKEDNQLRM*DQSFHKIAWSILRY
Trigger: GTAACGTAGAATGCTCCATGCTATTTTATGGAAACTTTGGTCTCACATCCGTAGCTGATTATCCTCTTTTTCTCCTATGAGTGGCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR CCA 90 bp GAGACAGAGATGCTAGCATTCTTCCTTATCCCTAAGTATTCCTGCTaGGGAGTCCCAATTGGAGAAATATTATCTTTCTACTTGTTTAAA +
Preference number: 1 (lower is better)
Translates to: ETEMLAFFLIPKYSC*GVPIGEILSFYLFK
Trigger: TTTAAACAAGTAGAAAGATAATATTTCTCCAATTGGGACTCCCCAGCAGGAATACTTAGGGATAAGGAAGAATGCTAGCATCTCTGTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR TCA 90 bp TTTTCAACAACTCCTGCCCAAGACATGAAGATCAAATCAGGTTTCTaGGGTAAGTGTACTTCTAAACCATACACACATGAAAGCTATGAA +
Preference number: 1 (lower is better)
Translates to: FSTTPAQDMKIKSGF*GKCTSKPYTHESYE
Trigger: TTCATAGCTTTCATGTGTGTATGGTTTAGAAGTACACTTACCTCAGAAACCTGATTTGATCTTCATGTCTTGGGCAGGAGTTGTTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR CCA 90 bp CCATGTGTTCTCATTGTTCAACATCCACTTATGAGTAAGAATATGTaGTGTTTGGTTTTATGTTCCTGTGTCAGTTTGCTGAGAATGATG +
Preference number: 1 (lower is better)
Translates to: PCVLIVQHPLMSKNM*CLVLCSCVSLLRMM
Trigger: CATCATTCTCAGCAAACTGACACAGGAACATAAAACCAAACACCACATATTCTTACTCATAAGTGGATGTTGAACAATGAGAACACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
3UTR TCA 90 bp AACTTACTAATTGTGTGTAAGTATGATACAATGAATGAGACTGCCTaGAGTCTAGTAATCAAAGCATGCCATAAGGTGAATGATTGTGGT +
Preference number: 1 (lower is better)
Translates to: NLLIVCKYDTMNETA*SLVIKACHKVNDCG
Trigger: ACCACAATCATTCACCTTATGGCATGCTTTGATTACTAGACTTCAGGCAGTCTCATTCATTGTATCATACTTACACACAATTAGTAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR-3UTR GCA 90 bp GCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACGTAACAAATATGCAGTaGATGCTGCCAACCCAGGAG +
Preference number: 2 (lower is better)
Translates to: ACNGSTQSLSNLSLPGPNVTNMQ*MLPTQE
Trigger: CTCCTGGGTTGGCAGCATGCACTGCATATTTGTTAC...GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR-3UTR CCA 90 bp GCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACCCTAAGTATTCCTGCTaGGGAGTCCCAATTGGAGAA +
Preference number: 2 (lower is better)
Translates to: ACNGSTQSLSNLSLPGPNPKYSC*GVPIGE
Trigger: TTCTCCAATTGGGACTCCCCAGCAGGAATACTTAGG...GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR-3UTR TCA 90 bp CCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACAAAAAGGTTACAGACTTaGGTGAAACTACTCAAGGAA +
Preference number: 2 (lower is better)
Translates to: PATEALSPYLTCPFLAPTKRLQT*VKLLKE
Trigger: TTCCTTGAGTAGTTTCACTCAAGTCTGTAACCTTTT...TGTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR-3UTR GCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGATATGCAGTGCATGCTaGCAACCCAGGAGTTTGTTC +
Preference number: 2 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEICSAC*QPRSLF
Trigger: GAACAAACTCCTGGGTTGGCAGCATGCACTGCATAT...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
3UTR-3UTR GCA 90 bp CAAATAATGTGGCCACAGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAATCCCTAAGTATTCCTaGTGGGGAGTCCCAATTGGA +
Preference number: 2 (lower is better)
Translates to: QIMWPQLPENLVVAQLGKIPKYS*WGVPIG
Trigger: TCCAATTGGGACTCCCCAGCAGGAATACTTAGGGAT...TTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTGTGGCCACATTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR-3UTR TCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGACTTTTGGTTTGGCCCTaGGCTGTTTGTTGCTCCCGC +
Preference number: 2 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRLLVWP*AVCCSR
Trigger: GCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAG...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCAAATATGCAGTGCATaGTGCCAACCCAGGAGTTTG +
Preference number: 2 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGQICSA*CQPRSL
Trigger: CAAACTCCTGGGTTGGCAGCATGCACTGCATATTTG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
3UTR-3UTR GCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAGTAACAAATATGCAGTaGATGCTGCCAACCCAGGAG +
Preference number: 2 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEVTNMQ*MLPTQE
Trigger: CTCCTGGGTTGGCAGCATGCACTGCATATTTGTTAC...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
3UTR-3UTR GCA 90 bp AACAACAAACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAGTTGCCGCTCTACTTTaGCTCAACTCAGAGCACCTA +
Preference number: 2 (lower is better)
Translates to: NNKPHQHSPAEISTGSQRVAALL*LNSEHL
Trigger: TAGGTGCTCTGAGTTGAGGCAAAGTAGAGCGGCAAC...TCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTTGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR CAA 90 bp ACGTTACTCCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTaGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: TLLQFLSFGLALSCL*LPHQVEFQILLQQR
Trigger: CCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGGAGTAACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR GCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCATATGCAGTGCATGCTaGCAACCCAGGAGTTTGTTC +
Preference number: 2 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSICSAC*QPRSLF
Trigger: GAACAAACTCCTGGGTTGGCAGCATGCACTGCATAT...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR GCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAACAAATATGCAGTGCATaGTGCCAACCCAGGAGTTTG +
Preference number: 2 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKQICSA*CQPRSL
Trigger: CAAACTCCTGGGTTGGCAGCATGCACTGCATATTTG...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
3UTR-3UTR GCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCATCCCTAAGTATTCCTaGTGGGGAGTCCCAATTGGA +
Preference number: 2 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSIPKYS*WGVPIG
Trigger: TCCAATTGGGACTCCCCAGCAGGAATACTTAGGGAT...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR CAA 90 bp TCTACGTTACTCCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTaGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: STLLQFLSFGLALSC*LLPHQVEFQILLQQ
Trigger: CTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGGAGTAACGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR GCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGGTAACAAATATGCAGTaGATGCTGCCAACCCAGGAG +
Preference number: 2 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLVTNMQ*MLPTQE
Trigger: CTCCTGGGTTGGCAGCATGCACTGCATATTTGTTAC...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR CCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGCCTAAGTATTCCTGCTaGGGAGTCCCAATTGGAGAA +
Preference number: 2 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLPKYSC*GVPIGE
Trigger: TTCTCCAATTGGGACTCCCCAGCAGGAATACTTAGG...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR CAA 90 bp AATAGCATGGAGCATTCTACGTTACTCCAATTTTTGTCTTTTGGTTaGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAA +
Preference number: 2 (lower is better)
Translates to: NSMEHSTLLQFLSFG*ALSCLLLPHQVEFQ
Trigger: TTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGGAGTAACGTAGAATGCTCCATGCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR GCA 90 bp CCTCAGACATATAGCACACATGGAGACAACTTACTAATTGTGTGTAAGTATGATATTGTGCAAACTGCCTaGAACGGAAGCACTCAGTCC +
Preference number: 2 (lower is better)
Translates to: PQTYSTHGDNLLIVCKYDIVQTA*NGSTQS
Trigger: GGACTGAGTGCTTCCGTTGCAGGCAGTTTGCACAAT...ATCATACTTACACACAATTAGTAAGTTGTCTCCATGTGTGCTATATGTCTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR-3UTR TCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCGGTTACAGACTTGAGTaGAACTACTCAAGGAACATA +
Preference number: 2 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSGYRLE*NYSRNI
Trigger: TATGTTCCTTGAGTAGTTTCACTCAAGTCTGTAACC...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR TCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAGTCATTAGTGTAACATaGAGAGCTGGCTTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGVISVT*RAGFPV
Trigger: CACTGGAAAGCCAGCTCTTCATGTTACACTAATGAC...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR GCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCATATGCAGTGCATGCTaGCAACCCAGGAGTTTGTTC +
Preference number: 2 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAICSAC*QPRSLF
Trigger: GAACAAACTCCTGGGTTGGCAGCATGCACTGCATAT...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR GCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGGTAATGCCCCTCTCTTaGAAAGAGAACAAACTGTCA +
Preference number: 2 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLVMPLS*KENKLS
Trigger: TGACAGTTTGTTCTCTTTGCAAGAGAGGGGCATTAC...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR TCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGGGTTACAGACTTGAGTaGAACTACTCAAGGAACATA +
Preference number: 2 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLGYRLE*NYSRNI
Trigger: TATGTTCCTTGAGTAGTTTCACTCAAGTCTGTAACC...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR TCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCGAGCTGGCTTTCCAGTaGATTTTACTAATAAGGAAA +
Preference number: 2 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSELAFQ*ILLIRK
Trigger: TTTCCTTATTAGTAAAATTCACTGGAAAGCCAGCTC...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR TCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCGTCATTAGTGTAACATaGAGAGCTGGCTTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAVISVT*RAGFPV
Trigger: CACTGGAAAGCCAGCTCTTCATGTTACACTAATGAC...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR TCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTATCCTCCCTATGTTTaGGAGACAGAGATGCTAGCA +
Preference number: 2 (lower is better)
Translates to: LNFILAIGLLASVVQNFSYPPYV*ETEMLA
Trigger: TGCTAGCATCTCTGTCTCTCAAACATAGGGAGGATA...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR CAA 90 bp ATGAGTAAGAATATGTGGTGTTTGGTTTTATGTTCCTGTGTCAGTTaGCTGAGAATGATGGTTTTCAGCTTCATCCATGTCTCTGCAAAG +
Preference number: 2 (lower is better)
Translates to: MSKNMWCLVLCSCVS*LRMMVFSFIHVSAK
Trigger: CTTTGCAGAGACATGGATGAAGCTGAAAACCATCATTCTCAGCAAACTGACACAGGAACATAAAACCAAACACCACATATTCTTACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338465.5
3UTR-3UTR TCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAGAGCTGGCTTTCCAGTaGATTTTACTAATAAGGAAA +
Preference number: 2 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGELAFQ*ILLIRK
Trigger: TTTCCTTATTAGTAAAATTCACTGGAAAGCCAGCTC...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR CCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGATTCCATAAAATAGCATaGAGCATTCTACGTTACTCC +
Preference number: 2 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGFHKIA*SILRYS
Trigger: GGAGTAACGTAGAATGCTCCATGCTATTTTATGGAA...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR CCA 90 bp CCTCAGACATATAGCACACATGGAGACAACTTACTAATTGTGTGTAAGTATGATAAGCCAGACAGTAAATaGTTAAATGCCCAAGGTTTG +
Preference number: 2 (lower is better)
Translates to: PQTYSTHGDNLLIVCKYDKPDSK*LNAQGL
Trigger: CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTT...ATCATACTTACACACAATTAGTAAGTTGTCTCCATGTGTGCTATATGTCTGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR CAA 90 bp GTTCTCATTGTTCAACATCCACTTATGAGTAAGAATATGTGGTGTTaGGTTTTATGTTCCTGTGTCAGTTTGCTGAGAATGATGGTTTTC +
Preference number: 2 (lower is better)
Translates to: VLIVQHPLMSKNMWC*VLCSCVSLLRMMVF
Trigger: GAAAACCATCATTCTCAGCAAACTGACACAGGAACATAAAACCAAACACCACATATTCTTACTCATAAGTGGATGTTGAACAATGAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338465.5
3UTR-3UTR TCA 90 bp TCCATCCATTTTATTGGAACACTTTTATGTGACTTGAATCTGGTGTTAGGTTGTAATCAGCTACGGATGTaGGACCAAAGTTTCCATAAA +
Preference number: 2 (lower is better)
Translates to: SIHFIGTLLCDLNLVLGCNQLRM*DQSFHK
Trigger: TTTATGGAAACTTTGGTCTCACATCCGTAGCTGATT...ACAACCTAACACCAGATTCAAGTCACATAAAAGTGTTCCAATAAAATGGATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR-3UTR CCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCCTGGGGAGTCCCAATTaGAGAAATATTATCTTTCTA +
Preference number: 2 (lower is better)
Translates to: LNFILAIGLLASVVQNFSLGSPN*RNIIFL
Trigger: TAGAAAGATAATATTTCTCCAATTGGGACTCCCCAG...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR GCA 72 bp AAGCTCAAAGGGAGGGAAACCTGGGGACAAGAGGTGTaGACACCCACATGTGGTCTCACTCTTCACACAGGC +
Preference number: 3 (lower is better)
Translates to: KLKGRETWGQEV*TPTCGLTLHTG
Trigger: GCCTGTGTGAAGAGTGAGACCACATGTGGGTGTGCACACCTCTTGTCCCCAGGTTTCCCTCCCTTTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR CCA 72 bp GGAAACCTGGGGACAAGAGGTGTGCACACCCACATGTaGTCTCACTCTTCACACAGGCCCACTATTTTTGAA +
Preference number: 3 (lower is better)
Translates to: GNLGTRGVHTHM*SHSSHRPTIFE
Trigger: TTCAAAAATAGTGGGCCTGTGTGAAGAGTGAGACCACATGTGGGTGTGCACACCTCTTGTCCCCAGGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR-3UTR CAA 90 bp GCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACGCTGGGGAGTCCCAATaGGAGAAATATTATCTTTCT +
Preference number: 3 (lower is better)
Translates to: ACNGSTQSLSNLSLPGPNAGESQ*EKYYLS
Trigger: AGAAAGATAATATTTCTCCAATTGGGACTCCCCAGC...GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR CCA 72 bp TGTTCTTCTTTGTTCTGGCATCTGACTGGACCAACCTaGAACCTGGTCCAGACCCTCACCCACTCTATTCTT +
Preference number: 3 (lower is better)
Translates to: CSSLFWHLTGPT*NLVQTLTHSIL
Trigger: AAGAATAGAGTGGGTGAGGGTCTGGACCAGGTTCCAGGTTGGTCCAGTCAGATGCCAGAACAAAGAAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR-3UTR CAA 90 bp AACAACAAACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAGCCCTGAGCTGTTTGTaGCTCCCGCATCAAGTAGAA +
Preference number: 3 (lower is better)
Translates to: NNKPHQHSPAEISTGSQRALSCL*LPHQVE
Trigger: TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGC...TCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTTGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR GCA 72 bp GGAACCTGGTCCAGACCCTCACCCACTCTATTCTTATaGCAATGGACATACCTATACTTTGAACCTCTGTAC +
Preference number: 3 (lower is better)
Translates to: GTWSRPSPTLFL*QWTYLYFEPLY
Trigger: GTACAGAGGTTCAAAGTATAGGTATGTCCATTGGCATAAGAATAGAGTGGGTGAGGGTCTGGACCAGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR-3UTR CAA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGATTGGCCCTGAGCTGTTaGTTGCTCCCGCATCAAGTA +
Preference number: 3 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGLALSC*LLPHQV
Trigger: TACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAA...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR GCA 72 bp GCTGAGAATGATGGTTTTCAGCTTCATCCATGTCTCTaGAAAGGACATGAACTCATCCATTTTTATGGCTGC +
Preference number: 3 (lower is better)
Translates to: AENDGFQLHPCL*KGHELIHFYGC
Trigger: GCAGCCATAAAAATGGATGAGTTCATGTCCTTTGCAGAGACATGGATGAAGCTGAAAACCATCATTCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
3UTR-3UTR CAA 90 bp AACAACAAACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGATTTTTGTCTTTTGGTTaGGCCCTGAGCTGTTTGTTG +
Preference number: 3 (lower is better)
Translates to: NNKPHQHSPAEISTGSQRFLSFG*ALSCLL
Trigger: CAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA...TCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTTGTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR TCA 72 bp GAAGACCAGTTCATGGATTTGCTTATTCTATCCTGCTaGGACAAAACTCATGAGTGTGCACACACATGTGAA +
Preference number: 3 (lower is better)
Translates to: EDQFMDLLILSC*DKTHECAHTCE
Trigger: TTCACATGTGTGTGCACACTCATGAGTTTTGTCTCAGCAGGATAGAATAAGCAAATCCATGAACTGGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR GCA 72 bp GAGATGCTAGCATTCTTCCTTATCCCTAAGTATTCCTaGTGGGGAGTCCCAATTGGAGAAATATTATCTTTC +
Preference number: 3 (lower is better)
Translates to: EMLAFFLIPKYS*WGVPIGEILSF
Trigger: GAAAGATAATATTTCTCCAATTGGGACTCCCCAGCAGGAATACTTAGGGATAAGGAAGAATGCTAGCATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR GCA 72 bp GGTTTGTTACATAGGTATACACATGCCATCATGGTTTaGTGCACCCATCAACCCATCATCTACATTAGGTAT +
Preference number: 3 (lower is better)
Translates to: GLLHRYTHAIMV*CTHQPIIYIRY
Trigger: ATACCTAATGTAGATGATGGGTTGATGGGTGCAGCAAACCATGATGGCATGTGTATACCTATGTAACAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338465.5
3UTR-3UTR CAA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAGCTGTGCTATTAATTTaGAGCAGGCATATTCTGGTG +
Preference number: 3 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRAVLLI*SRHILV
Trigger: CACCAGAATATGCCTGCTCAAAATTAATAGCACAGC...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR-3UTR CAA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCTTATCCTCCCTATGTTaGAGAGACAGAGATGCTAGC +
Preference number: 3 (lower is better)
Translates to: FNCNPILRAKPDSKWLNALSSLC*RDRDAS
Trigger: GCTAGCATCTCTGTCTCTCAAACATAGGGAGGATAA...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR GCA 72 bp TTGTTACATAGGTATACACATGCCATCATGGTTTGCTaGACCCATCAACCCATCATCTACATTAGGTATTTC +
Preference number: 3 (lower is better)
Translates to: LLHRYTHAIMVC*THQPIIYIRYF
Trigger: GAAATACCTAATGTAGATGATGGGTTGATGGGTGCAGCAAACCATGATGGCATGTGTATACCTATGTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338465.5
3UTR TCA 72 bp CTCATAGGAGAAAAAGAGGATAATCAGCTACGGATGTaGGACCAAAGTTTCCATAAAATAGCATGGAGCATT +
Preference number: 3 (lower is better)
Translates to: LIGEKEDNQLRM*DQSFHKIAWSI
Trigger: AATGCTCCATGCTATTTTATGGAAACTTTGGTCTCACATCCGTAGCTGATTATCCTCTTTTTCTCCTATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR TCA 72 bp CCAATAACCTATTTTCAACAACTCCTGCCCAAGACATaGAGATCAAATCAGGTTTCTGAGGTAAGTGTACTT +
Preference number: 3 (lower is better)
Translates to: PITYFQQLLPKT*RSNQVSEVSVL
Trigger: AAGTACACTTACCTCAGAAACCTGATTTGATCTTCATGTCTTGGGCAGGAGTTGTTGAAAATAGGTTATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR TCA 72 bp ATTGTGTGTAAGTATGATACAATGAATGAGACTGCCTaGAGTCTAGTAATCAAAGCATGCCATAAGGTGAAT +
Preference number: 3 (lower is better)
Translates to: IVCKYDTMNETA*SLVIKACHKVN
Trigger: ATTCACCTTATGGCATGCTTTGATTACTAGACTTCAGGCAGTCTCATTCATTGTATCATACTTACACACAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGGAGCCCGCGAGGAGTaGGAGGAGCCGAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFGAREE*EEPRVM
Trigger: CATTACCCTCGGCTCCTCCCACTCCTCGCGGGCTCC...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTGGAGCCCGCGAGGAGTaGGAGGAGCCGAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVGAREE*EEPRVM
Trigger: CATTACCCTCGGCTCCTCCCACTCCTCGCGGGCTCC...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACCGATCTCGATCACTCTaGACGGCAGCCTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: ACNGSTQSLSNLSLPGPNRSRSL*TAASWI
Trigger: AATCCAAGAGGCTGCCGTGCAGAGTGATCGAGATCG...GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTCTGACTGGACCAACCTaGAACCTGGTCCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFLTGPT*NLVQTL
Trigger: GAGGGTCTGGACCAGGTTCCAGGTTGGTCCAGTCAG...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR CAA 72 bp ACTGCCTGCAACGGAAGCACTCAGTCCTTATCTAACTaGTCCCTTCCTGGCCCCAACATGCTAACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TACNGSTQSLSN*SLPGPNMLTAP
Trigger: TGGGGCAGTTAGCATGTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGCTGGTTTCCTTCTGTaGGGTCCTGCTGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFAGFLL*GPAAQN
Trigger: ATTCTGGGCAGCAGGACCTCACAGAAGGAAACCAGC...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTGTTCCTCACAAGGCCTaGCGGGTAGTCTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVVPHKA*RVVFPT
Trigger: AGTGGGGAAGACTACCCGTCAGGCCTTGTGAGGAAC...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAGGAGCCCGCGAGGAGTaGGAGGAGCCGAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEGAREE*EEPRVM
Trigger: CATTACCCTCGGCTCCTCCCACTCCTCGCGGGCTCC...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACAAAAGGGAGGGAAACCTaGGGACAAGAGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: PATEALSPYLTCPFLAPTKGRET*GQEVCT
Trigger: TGTGCACACCTCTTGTCCCCAGGTTTCCCTCCCTTT...TGTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTAAACTACCAGACCCCTaGGACGGTTTCATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCKLPDP*DGFMAA
Trigger: TGCAGCCATGAAACCGTCTCAGGGGTCTGGTAGTTT...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTAAGGCTCTGAGCCAGTaGCTGCTGAAGCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVKALSQ*LLKLLL
Trigger: GAGCAAGAGCTTCAGCAGGCACTGGCTCAGAGCCTT...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACAGGTATTGTGCAAACTaGCTGCAACGGAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: ACNGSTQSLSNLSLPGPNRYCAN*LQRKHS
Trigger: TGAGTGCTTCCGTTGCAGGCAGTTTGCACAATACCT...GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTAGTTGCTGCTGTTGGTaGGAGGAAAGGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVSCCCW*EERGTL
Trigger: AAGAGTGCCCCTTTCCTCTCACCAACAGCAGCAACT...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACATTCAGTGCAATGAGATaGCAGGGTCAGGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: PATEALSPYLTCPFLAPTFSAMR*QGQVSW
Trigger: CCAAGATACCTGACCCTGTCATCTCATTGCACTGAA...TGTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTCAGGATCCAGCTCTGTaGTTGTTTTGGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFQDPAL*LFWASQ
Trigger: CTGAGAAGCCCAAAACAATCACAGAGCTGGATCCTG...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTCAGGATCCAGCTCTGTaGTTGTTTTGGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCQDPAL*LFWASQ
Trigger: CTGAGAAGCCCAAAACAATCACAGAGCTGGATCCTG...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTGCCGCTCTACTTTaGCTCAACTCAGAGCACCTA +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFVAALL*LNSEHL
Trigger: TAGGTGCTCTGAGTTGAGGCAAAGTAGAGCGGCAAC...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTCCTGCTGCCCAGAATaGCTCCAAAACTACCAGACC +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVSCCPE*LQNYQT
Trigger: GGTCTGGTAGTTTTGGAGCCATTCTGGGCAGCAGGA...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACACCTAAGTATTCCTGCTaGGGAGTCCCAATTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PATEALSPYLTCPFLAPTPKYSC*GVPIGE
Trigger: TTCTCCAATTGGGACTCCCCAGCAGGAATACTTAGG...TGTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp GCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACAGATCAAGAGAATCTTaGATTGAACGAGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: ACNGSTQSLSNLSLPGPNRSRES*IERGGS
Trigger: ACTCCCTCCTCGTTCAATTCAAGATTCTCTTGATCT...GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTTCAGTGCAATGAGATaGCAGGGTCAGGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFFSAMR*QGQVSW
Trigger: CCAAGATACCTGACCCTGTCATCTCATTGCACTGAA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTCAGTGCAATGAGATaGCAGGGTCAGGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCFSAMR*QGQVSW
Trigger: CCAAGATACCTGACCCTGTCATCTCATTGCACTGAA...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGGTTCCTCACAAGGCCTaGCGGGTAGTCTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERVPHKA*RVVFPT
Trigger: AGTGGGGAAGACTACCCGTCAGGCCTTGTGAGGAAC...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGCTTTTGGTTTGGCCCTaGGCTGTTTGTTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAELLVWP*AVCCSR
Trigger: GCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAG...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCTTTTGGTTTGGCCCTaGGCTGTTTGTTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGELLVWP*AVCCSR
Trigger: GCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTCCAGGTCTTCCTGCTaGTGTTCGTTGCCTAACATT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFSRSSC*CSLPNI
Trigger: AATGTTAGGCAACGAACAGCAGCAGGAAGACCTGGA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTATCCCTAAGTATTCCTaGTGGGGAGTCCCAATTGGA +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCIPKYS*WGVPIG
Trigger: TCCAATTGGGACTCCCCAGCAGGAATACTTAGGGAT...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTCTCTGTCACTCAGACTaGAGTGCAATGATGCGATCT +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCLCHSD*SAMMRS
Trigger: AGATCGCATCATTGCACTGCAGTCTGAGTGACAGAG...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR GCA 90 bp GCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACTGGAGATCCAGCTGTTaGCCCCTGTTTAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: ACNGSTQSLSNLSLPGPNWRSSC*PLFKTK
Trigger: TTTTGTTTTAAACAGGGGGCAACAGCTGGATCTCCA...GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp CACATTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTGGAGCCCGCGAGGAGTaGGAGGAGCCGAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: HIFFILSIIDGHLPLPSLGAREE*EEPRVM
Trigger: CATTACCCTCGGCTCCTCCCACTCCTCGCGGGCTCC...AAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAGGAGCCCGCGAGGAGTaGGAGGAGCCGAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGGAREE*EEPRVM
Trigger: CATTACCCTCGGCTCCTCCCACTCCTCGCGGGCTCC...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTGGAGGGATCTGTCATaGCCTTGTTGTTCGATGATG +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCWRDLS*PCCSMM
Trigger: CATCATCGAACAACAAGGCCATGACAGATCCCTCCA...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTTGGCAGAGGGAGTCTaGCTTGAAACATTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFLAEGV*LETLVL
Trigger: CAGGACTAATGTTTCAAGCCAGACTCCCTCTGCCAA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTGGAAAGGGGCACTCTTaGTTTATTCCAGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCGKGHS*FIPASV
Trigger: TACACTGGCTGGAATAAACCAAGAGTGCCCCTTTCC...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTATTTCACAAAGTCTCTaGCTGAGGGCCACAGAACGT +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCISQSL*LRATER
Trigger: ACGTTCTGTGGCCCTCAGCCAGAGACTTTGTGAAAT...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTATTTCACAAAGTCTCTaGCTGAGGGCCACAGAACGT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFISQSL*LRATER
Trigger: ACGTTCTGTGGCCCTCAGCCAGAGACTTTGTGAAAT...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTGCAAATCCGGTATCTaGGCTGCTAGTTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFCKSGI*AASWLI
Trigger: GATAAGCCAACTAGCAGCCCAGATACCGGATTTGCA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACAATTCACCTTTATTCTaGTCCTTGTGCCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ACNGSTQSLSNLSLPGPNNSPLF*SLCQRQ
Trigger: TTGCCTTTGGCACAAGGATCAGAATAAAGGTGAATT...GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAGCTGGTTTCCTTCTGTaGGGTCCTGCTGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEAGFLL*GPAAQN
Trigger: ATTCTGGGCAGCAGGACCTCACAGAAGGAAACCAGC...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTGAAAGAGGAACTGGCTaGGGAAGAAATCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCERGTG*GRNPKL
Trigger: AAGTTTGGGATTTCTTCCTCAGCCAGTTCCTCTTTC...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTATCCTCCCTATGTTTaGGAGACAGAGATGCTAGCA +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCYPPYV*ETEMLA
Trigger: TGCTAGCATCTCTGTCTCTCAAACATAGGGAGGATA...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTTCCTTCTGAAAACCTaGTGTGGTTTTGTCCCTACC +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFFLLKT*CGFVPT
Trigger: GGTAGGGACAAAACCACATCAGGTTTTCAGAAGGAA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCAGACTGCAGTGCAATaGTGCGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEQTAVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCATCATTGCACTGCAGTCTG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTAATGAGGCTGCTTCATaGGGCAATCTAGACTTATGG +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFNEAAS*GNLDLW
Trigger: CCATAAGTCTAGATTGCCTCATGAAGCAGCCTCATT...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGCTTTGTTCTGGCATCTaGCTGGACCAACCTGGAACC +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAELCSGI*LDQPGT
Trigger: GGTTCCAGGTTGGTCCAGTCAGATGCCAGAACAAAG...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp TGGTTTGCTGCACCCATCAACCCATCATCTACATTAGGTATTTCTCTTAATGCTACAGACCCCGGTGAGTaGTGTTCCCCTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: WFAAPINPSSTLGISLNATDPGE*CSPPCV
Trigger: GACACAGGGAGGGGAACATCACTCACCGGGGTCTGT...AGCATTAAGAGAAATACCTAATGTAGATGATGGGTTGATGGGTGCAGCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGCCTTCTGTGAGGTCCTaGTGCCCAGAATGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERPSVRS*CPEWLQ
Trigger: TTGGAGCCATTCTGGGCAGCAGGACCTCACAGAAGG...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCCTTCTGTGAGGTCCTaGTGCCCAGAATGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGPSVRS*CPEWLQ
Trigger: TTGGAGCCATTCTGGGCAGCAGGACCTCACAGAAGG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAACCTTCTGTGAGGTCCTaGTGCCCAGAATGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEPSVRS*CPEWLQ
Trigger: TTGGAGCCATTCTGGGCAGCAGGACCTCACAGAAGG...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTCCTGCTGCTGTTCGTTaGCTAACATTTCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFPAAVR*LTFHKV
Trigger: GACTTTGTGAAATGTTAGGCAACGAACAGCAGCAGG...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTCGCTCCATATCATACTaGTGGAGCCAATCAACTTCT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFRSISY*WSQSTS
Trigger: AGAAGTTGATTGGCTCCAGCAGTATGATATGGAGCG...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTAAGGCTCTGAGCCAGTaGCTGCTGAAGCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGKALSQ*LLKLLL
Trigger: GAGCAAGAGCTTCAGCAGGCACTGGCTCAGAGCCTT...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCAAATATGCAGTGCATaGTGCCAACCCAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVQICSA*CQPRSL
Trigger: CAAACTCCTGGGTTGGCAGCATGCACTGCATATTTG...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACATTTGAGTCCCAAACATaGAAGTACATGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PATEALSPYLTCPFLAPTFESQT*KYMSSE
Trigger: CTCACTGCTCATGTACTTGCATGTTTGGGACTCAAA...TGTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTTGGCAGAGGGAGTCTaGCTTGAAACATTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVLAEGV*LETLVL
Trigger: CAGGACTAATGTTTCAAGCCAGACTCCCTCTGCCAA...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTGTCCTATTCTCTTCTaGCTGTTTCAAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFCPILF*LFQTQL
Trigger: CAGCTGAGTTTGAAACAGTCAGAAGAGAATAGGACA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGAGTTGCTGCTGTTGGTaGGAGGAAAGGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERSCCCW*EERGTL
Trigger: AAGAGTGCCCCTTTCCTCTCACCAACAGCAGCAACT...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAAGTTGCTGCTGTTGGTaGGAGGAAAGGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVESCCCW*EERGTL
Trigger: AAGAGTGCCCCTTTCCTCTCACCAACAGCAGCAACT...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTAAGAGAATCTTGAATTaGACGAGGAGGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFKRILN*TRREWF
Trigger: AAACCACTCCCTCCTCGTTCAATTCAAGATTCTCTT...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGCGAGAGAGCCACATTaGAGCTATATCGTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFAREPH*SYIVSN
Trigger: ATTTGAAACGATATAGCTTCAATGTGGCTCTCTCGC...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTGTATTTTCAGTGCAATaGGATGACAGGGTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCVFSVQ*DDRVRY
Trigger: ATACCTGACCCTGTCATCTCATTGCACTGAAAATAC...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGCACAAAGTCTCTGGCTaGGGGCCACAGAACGTTTTA +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEHKVSG*GPQNVL
Trigger: TAAAACGTTCTGTGGCCCTCAGCCAGAGACTTTGTG...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCACAAAGTCTCTGGCTaGGGGCCACAGAACGTTTTA +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEHKVSG*GPQNVL
Trigger: TAAAACGTTCTGTGGCCCTCAGCCAGAGACTTTGTG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGCAGGATCCAGCTCTGTaGTTGTTTTGGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEQDPAL*LFWASQ
Trigger: CTGAGAAGCCCAAAACAATCACAGAGCTGGATCCTG...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGATGAGCCGGTACGAATaGGGCAGATTTCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEMSRYE*GRFPVS
Trigger: TGAGACAGGAAATCTGCCTCATTCGTACCGGCTCAT...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTAGCCTCTTGGATTTTTaGTACCTCCAGGTCATTGTA +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCSLLDF*YLQVIV
Trigger: TACAATGACCTGGAGGTATCAAAAATCCAAGAGGCT...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTCCGTGCTAAGTGACTaGGAGTTCTTTTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVSVLSD*EFFSVS
Trigger: GGAAACAGAAAAGAACTCTCAGTCACTTAGCACGGA...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCACTTCCGTGCTAAGTaGCTGAGAGTTCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVHFRAK*LRVLFC
Trigger: ACAGAAAAGAACTCTCAGTCACTTAGCACGGAAGTG...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAATCTGTGAGGTCCTGCTaGCCAGAATGGCTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVESVRSC*PEWLQN
Trigger: GTTTTGGAGCCATTCTGGGCAGCAGGACCTCACAGA...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATCTGTGAGGTCCTGCTaGCCAGAATGGCTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEESVRSC*PEWLQN
Trigger: GTTTTGGAGCCATTCTGGGCAGCAGGACCTCACAGA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTTCTGTGAGGTCCTGCTaGCCAGAATGGCTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGSVRSC*PEWLQN
Trigger: GTTTTGGAGCCATTCTGGGCAGCAGGACCTCACAGA...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCCTTGGATCCAGCTCTaGTACCATAAAAGGATGATG +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVPWIQL*YHKRMM
Trigger: CATCATCCTTTTATGGTAGCAGAGCTGGATCCAAGG...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCCTGCTGCTGTTCGTTaGCTAACATTTCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVPAAVR*LTFHKV
Trigger: GACTTTGTGAAATGTTAGGCAACGAACAGCAGCAGG...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTCTCATCAGAACCCAATaGATCCACAAAGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFLIRTQ*IHKGVV
Trigger: AACAACTCCTTTGTGGATGCATTGGGTTCTGATGAG...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGCGATCTCGATCACTCTaGACGGCAGCCTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERRSRSL*TAASWI
Trigger: AATCCAAGAGGCTGCCGTGCAGAGTGATCGAGATCG...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCGATCTCGATCACTCTaGACGGCAGCCTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGRSRSL*TAASWI
Trigger: AATCCAAGAGGCTGCCGTGCAGAGTGATCGAGATCG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGTTGCCGCTCTACTTTaGCTCAACTCAGAGCACCTA +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEVAALL*LNSEHL
Trigger: TAGGTGCTCTGAGTTGAGGCAAAGTAGAGCGGCAAC...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTTTGTTTCGCTCCACTaGGTCGAAGCACCACATTTT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVFVSLH*VEAPHF
Trigger: AAAATGTGGTGCTTCGACCCAGTGGAGCGAAACAAA...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TATACACATGCCATCATGGTTTGCTGCACCCATCAACCCATCATCTACATTAGGTCCTGCTGCCCAGAATaGCTCCAAAACTACCAGACC +
Preference number: 4 (lower is better)
Translates to: YTHAIMVCCTHQPIIYIRSCCPE*LQNYQT
Trigger: GGTCTGGTAGTTTTGGAGCCATTCTGGGCAGCAGGA...CCTAATGTAGATGATGGGTTGATGGGTGCAGCAAACCATGATGGCATGTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCCTGCTGCCCAGAATaGCTCCAAAACTACCAGACC +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERSCCPE*LQNYQT
Trigger: GGTCTGGTAGTTTTGGAGCCATTCTGGGCAGCAGGA...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGAAGAAAGCTGCCTGCTaGTTTCCTTCTGTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEKKAAC*FPSVRS
Trigger: GGACCTCACAGAAGGAAACCAGCAGGCAGCTTTCTT...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTCAGGGTCAGGTATCTTaGAATGATGACTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSQGQVS*NDDLLP
Trigger: GGGCAGCAAGTCATCATTCCAAGATACCTGACCCTG...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCAGGGTCAGGTATCTTaGAATGATGACTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEQGQVS*NDDLLP
Trigger: GGGCAGCAAGTCATCATTCCAAGATACCTGACCCTG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACTTCCATAAAATAGCATaGAGCATTCTACGTTACTCC +
Preference number: 4 (lower is better)
Translates to: ACNGSTQSLSNLSLPGPNFHKIA*SILRYS
Trigger: GGAGTAACGTAGAATGCTCCATGCTATTTTATGGAA...GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTAAATCCATATGTACTTaGAGATCCAGCTGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVKSICT*RSSCCP
Trigger: GGGGCAACAGCTGGATCTCCAAGTACATATGGATTT...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTATCTCACAAATAATGTaGCCACAGCTGCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFISQIM*PQLPEN
Trigger: GTTTTCTGGCAGCTGTGGCCACATTATTTGTGAGAT...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp GGTTTTATGTTCCTGTGTCAGTTTGCTGAGAATGATGGTTTTCAGCTTCATCCAGCTGGTTTCCTTCTGTaGGGTCCTGCTGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GFMFLCQFAENDGFQLHPAGFLL*GPAAQN
Trigger: ATTCTGGGCAGCAGGACCTCACAGAAGGAAACCAGC...TGGATGAAGCTGAAAACCATCATTCTCAGCAAACTGACACAGGAACATAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR TCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGAGAAGCCTGATTGTCTaGGTAAGAAAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAERSLIV*VRKLPA
Trigger: AGCAGGCAGCTTTCTTACTCAGACAATCAGGCTTCT...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTCTCTCTGCTGTAGCTaGAATGGCATTTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFSLCCS*NGIFNL
Trigger: AAGGTTAAAAATGCCATTTCAGCTACAGCAGAGAGA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTCAAATGATGGAGTGCTaGACCTCAAACTCCAAATTA +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCQMMEC*TSNSKL
Trigger: TAATTTGGAGTTTGAGGTTCAGCACTCCATCATTTG...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCACATGCTTTACAAATaGTGGAGTGCTGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVHMLYK*WSAEPQ
Trigger: TTGAGGTTCAGCACTCCATCATTTGTAAAGCATGTG...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTAAGAGAATCTTGAATTaGACGAGGAGGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVKRILN*TRREWF
Trigger: AAACCACTCCCTCCTCGTTCAATTCAAGATTCTCTT...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTGCGAGAGAGCCACATTaGAGCTATATCGTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVAREPH*SYIVSN
Trigger: ATTTGAAACGATATAGCTTCAATGTGGCTCTCTCGC...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTTCAGTGCAATGAGATaGCAGGGTCAGGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEFSAMR*QGQVSW
Trigger: CCAAGATACCTGACCCTGTCATCTCATTGCACTGAA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTGTATTTTCAGTGCAATaGGATGACAGGGTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVVFSVQ*DDRVRY
Trigger: ATACCTGACCCTGTCATCTCATTGCACTGAAAATAC...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAACACAAAGTCTCTGGCTaGGGGCCACAGAACGTTTTA +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEHKVSG*GPQNVL
Trigger: TAAAACGTTCTGTGGCCCTCAGCCAGAGACTTTGTG...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACACAAAGTCTCTGGCTaGGGGCCACAGAACGTTTTA +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEHKVSG*GPQNVL
Trigger: TAAAACGTTCTGTGGCCCTCAGCCAGAGACTTTGTG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTATGACTCAGAGATGGTaGAGCATCTCTCTTACTTAT +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCMTQRW*SISLTY
Trigger: ATAAGTAAGAGAGATGCTTCACCATCTCTGAGTCAT...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTATGACTCAGAGATGGTaGAGCATCTCTCTTACTTAT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFMTQRW*SISLTY
Trigger: ATAAGTAAGAGAGATGCTTCACCATCTCTGAGTCAT...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTATCATCATCTTCATaGCTCAGAGATGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCLSSSS*LRDGEA
Trigger: TGCTTCACCATCTCTGAGTCATGAAGATGATGATAA...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACAGGATCCAGCTCTGTaGTTGTTTTGGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEQDPAL*LFWASQ
Trigger: CTGAGAAGCCCAAAACAATCACAGAGCTGGATCCTG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAATGAGCCGGTACGAATaGGGCAGATTTCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEMSRYE*GRFPVS
Trigger: TGAGACAGGAAATCTGCCTCATTCGTACCGGCTCAT...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTAGCCTCTTGGATTTTTaGTACCTCCAGGTCATTGTA +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVSLLDF*YLQVIV
Trigger: TACAATGACCTGGAGGTATCAAAAATCCAAGAGGCT...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGCTTTTGGTTTGGCCCTaGGCTGTTTGTTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLLLVWP*AVCCSR
Trigger: GCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAG...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTAATCAGCTACGGATGTaGGACCAAAGTTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCNQLRM*DQSFHK
Trigger: TTTATGGAAACTTTGGTCTCACATCCGTAGCTGATT...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAACAGACTGCAGTGCAATaGTGCGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKQTAVQ*CDLSSL
Trigger: CAGTGAGCTGAGATCGCATCATTGCACTGCAGTCTG...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTCTTATTCTATCCTGCTaGGACAAAACTCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFLILSC*DKTHEC
Trigger: ACACTCATGAGTTTTGTCTCAGCAGGATAGAATAAG...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTAAGAAGCTGTTATCTTaGAGAGTTAACATTAGGCGG +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFKKLLS*RVNIRR
Trigger: CCGCCTAATGTTAACTCTGCAAGATAACAGCTTCTT...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CATTACCCTCACTTTTTACATTTAAAACCATCAACCCTTCTGTGCTGCACTGCACCTTCTGTGAGGTCCTaGTGCCCAGAATGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: HYPHFLHLKPSTLLCCTAPSVRS*CPEWLQ
Trigger: TTGGAGCCATTCTGGGCAGCAGGACCTCACAGAAGG...TGCAGTGCAGCACAGAAGGGTTGATGGTTTTAAATGTAAAAAGTGAGGGTAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGAGTAAGAAAGCTGCCTaGTGGTTTCCTTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAESKKAA*WFPSVR
Trigger: CCTCACAGAAGGAAACCAGCAGGCAGCTTTCTTACT...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGAGTAAGAAAGCTGCCTaGTGGTTTCCTTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGESKKAA*WFPSVR
Trigger: CCTCACAGAAGGAAACCAGCAGGCAGCTTTCTTACT...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTAGCTATTCCACTTCCTaGTACAGTCTTAATCGATCC +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVSYSTS*YSLNRS
Trigger: GGATCGATTAAGACTGTAGCAGGAAGTGGAATAGCT...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTGTTTCAAACTCAGCTaGTTTTCTCTACTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFCFKLS*FSLLLV
Trigger: AACCAGCAGTAGAGAAAAGCAGCTGAGTTTGAAACA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTTAACAAGCAAGTGTaGAAAGCGTCTGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCFNKQV*KASDKC
Trigger: GCACTTATCAGACGCTTTGCACACTTGCTTGTTAAA...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTAGAAATTGCCATATGTaGACTCCAACCAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFRNCHM*TPTKGK
Trigger: TTTACCCTTGGTTGGAGTGCACATATGGCAATTTCT...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTTTTTCCAGGTCTTCCTaGTGCTGTTCGTTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSFSRSS*CCSLPN
Trigger: GTTAGGCAACGAACAGCAGCAGGAAGACCTGGAAAA...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTGAATATCATCTTCTaGAAATCCGGTATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCLNIIF*KSGIWA
Trigger: AGCCCAGATACCGGATTTGCAGAAGATGATATTCAA...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCTCATCAGAACCCAATaGATCCACAAAGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVLIRTQ*IHKGVV
Trigger: AACAACTCCTTTGTGGATGCATTGGGTTCTGATGAG...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTGTAACAAATATGCAGTaGATGCTGCCAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSVTNMQ*MLPTQE
Trigger: CTCCTGGGTTGGCAGCATGCACTGCATATTTGTTAC...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGGTAACAAATATGCAGTaGATGCTGCCAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEVTNMQ*MLPTQE
Trigger: CTCCTGGGTTGGCAGCATGCACTGCATATTTGTTAC...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGATCCCTAAGTATTCCTaGTGGGGAGTCCCAATTGGA +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEIPKYS*WGVPIG
Trigger: TCCAATTGGGACTCCCCAGCAGGAATACTTAGGGAT...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTCAGCATCCAGCCACATaGAACTTTCCAACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSQHPAT*NFPTFS
Trigger: ACTGAAGGTTGGAAAGTTGCATGTGGCTGGATGCTG...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTGCAAAGCACTCTTCTTaGGACACTACTCATATTCTG +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVAKHSS*DTTHIL
Trigger: CAGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGC...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAATCCTGCTGCCCAGAATaGCTCCAAAACTACCAGACC +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKSCCPE*LQNYQT
Trigger: GGTCTGGTAGTTTTGGAGCCATTCTGGGCAGCAGGA...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAAGAAAGCTGCCTGCTaGTTTCCTTCTGTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEKKAAC*FPSVRS
Trigger: GGACCTCACAGAAGGAAACCAGCAGGCAGCTTTCTT...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TATACACATGCCATCATGGTTTGCTGCACCCATCAACCCATCATCTACATTAGGAAGAAAGCTGCCTGCTaGTTTCCTTCTGTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: YTHAIMVCCTHQPIIYIRKKAAC*FPSVRS
Trigger: GGACCTCACAGAAGGAAACCAGCAGGCAGCTTTCTT...CCTAATGTAGATGATGGGTTGATGGGTGCAGCAAACCATGATGGCATGTGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTAAGAAAGCTGCCTGCTaGTTTCCTTCTGTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGKKAAC*FPSVRS
Trigger: GGACCTCACAGAAGGAAACCAGCAGGCAGCTTTCTT...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGTGGAGGGATCTGTCATaGCCTTGTTGTTCGATGATG +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEWRDLS*PCCSMM
Trigger: CATCATCGAACAACAAGGCCATGACAGATCCCTCCA...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTGGTTAAATACTTTCTaGAGGGATCTGTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVWLNTF*RDLSWP
Trigger: AGGCCATGACAGATCCCTCCAGAAAGTATTTAACCA...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTCAGAAGAGTGTTCCTTaGATCCAGCTCTGCTACCAT +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSQKSVP*IQLCYH
Trigger: ATGGTAGCAGAGCTGGATCCAAGGAACACTCTTCTG...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CAAATAATGTGGCCACAGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAATCCCAAACTTCTTTTaGCAGAGGGAGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QIMWPQLPENLVVAQLGKIPNFF*QRESGL
Trigger: CAAGCCAGACTCCCTCTGCCAAAAGAAGTTTGGGAT...TTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTGTGGCCACATTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGGGAAAGGGGCACTCTTaGTTTATTCCAGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEGKGHS*FIPASV
Trigger: TACACTGGCTGGAATAAACCAAGAGTGCCCCTTTCC...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGGAAAGGGGCACTCTTaGTTTATTCCAGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEGKGHS*FIPASV
Trigger: TACACTGGCTGGAATAAACCAAGAGTGCCCCTTTCC...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACAGGGTCAGGTATCTTaGAATGATGACTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEQGQVS*NDDLLP
Trigger: GGGCAGCAAGTCATCATTCCAAGATACCTGACCCTG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCAGGGTCAGGTATCTTaGAATGATGACTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGQGQVS*NDDLLP
Trigger: GGGCAGCAAGTCATCATTCCAAGATACCTGACCCTG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCCTAAGTATTCCTGCTaGGGAGTCCCAATTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEPKYSC*GVPIGE
Trigger: TTCTCCAATTGGGACTCCCCAGCAGGAATACTTAGG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCGTTCTGGCATCTGACTaGACCAACCTGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSVLASD*TNLEPG
Trigger: ACCAGGTTCCAGGTTGGTCCAGTCAGATGCCAGAAC...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGTGCACACCCACATGTaGTCTCACTCTTCACACAGG +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKVHTHM*SHSSHR
Trigger: CCTGTGTGAAGAGTGAGACCACATGTGGGTGTGCAC...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGAGAAGCCTGATTGTCTaGGTAAGAAAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERRSLIV*VRKLPA
Trigger: AGCAGGCAGCTTTCTTACTCAGACAATCAGGCTTCT...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTGAAAGAGGAACTGGCTaGGGAAGAAATCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSERGTG*GRNPKL
Trigger: AAGTTTGGGATTTCTTCCTCAGCCAGTTCCTCTTTC...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGAGTTGCTGCTGTTGGTaGGAGGAAAGGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLSCCCW*EERGTL
Trigger: AAGAGTGCCCCTTTCCTCTCACCAACAGCAGCAACT...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTCTCTCTGCTGTAGCTaGAATGGCATTTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVSLCCS*NGIFNL
Trigger: AAGGTTAAAAATGCCATTTCAGCTACAGCAGAGAGA...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCAAATGATGGAGTGCTaGACCTCAAACTCCAAATTA +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVQMMEC*TSNSKL
Trigger: TAATTTGGAGTTTGAGGTTCAGCACTCCATCATTTG...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTTATCATCATCTTCATaGCTCAGAGATGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVLSSSS*LRDGEA
Trigger: TGCTTCACCATCTCTGAGTCATGAAGATGATGATAA...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGCAATCAACTTCTCCCTaGGATCCTTCTGGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEQSTSP*DPSGVL
Trigger: CAAAACTCCAGAAGGATCTCAGGGAGAAGTTGATTG...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCATGAGCCGGTACGAATaGGGCAGATTTCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSMSRYE*GRFPVS
Trigger: TGAGACAGGAAATCTGCCTCATTCGTACCGGCTCAT...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTACTAATGTAATGACCTaGAGAAGAAGTGCTACCAAT +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFTNVMT*RRSATN
Trigger: ATTGGTAGCACTTCTTCTTCAGGTCATTACATTAGT...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTACTAATGTAATGACCTaGAGAAGAAGTGCTACCAAT +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCTNVMT*RRSATN
Trigger: ATTGGTAGCACTTCTTCTTCAGGTCATTACATTAGT...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGTCCGTGCTAAGTGACTaGGAGTTCTTTTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAESVLSD*EFFSVS
Trigger: GGAAACAGAAAAGAACTCTCAGTCACTTAGCACGGA...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCACTTCCGTGCTAAGTaGCTGAGAGTTCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEHFRAK*LRVLFC
Trigger: ACAGAAAAGAACTCTCAGTCACTTAGCACGGAAGTG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCGTTCCTCACAAGGCCTaGCGGGTAGTCTTCCCCACT +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAVPHKA*RVVFPT
Trigger: AGTGGGGAAGACTACCCGTCAGGCCTTGTGAGGAAC...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTCACACATTTCTCAGGTaGATGGACTCTTTGACACCT +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSHTFLR*MDSLTP
Trigger: AGGTGTCAAAGAGTCCATTCACCTGAGAAATGTGTG...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGTCATTAGTGTAACATaGAGAGCTGGCTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEVISVT*RAGFPV
Trigger: CACTGGAAAGCCAGCTCTTCATGTTACACTAATGAC...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTGTCATTAGTGTAACATaGAGAGCTGGCTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSVISVT*RAGFPV
Trigger: CACTGGAAAGCCAGCTCTTCATGTTACACTAATGAC...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTTATCCTCCCTATGTTTaGGAGACAGAGATGCTAGCA +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSYPPYV*ETEMLA
Trigger: TGCTAGCATCTCTGTCTCTCAAACATAGGGAGGATA...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTTCCTTCTGAAAACCTaGTGTGGTTTTGTCCCTACC +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEFLLKT*CGFVPT
Trigger: GGTAGGGACAAAACCACATCAGGTTTTCAGAAGGAA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR TCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAACCTCCTGGGTTCAAGTaGTTCTCTCATGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKPPGFK*FSHVMV
Trigger: CACCATCACATGAGAGAATCACTTGAACCCAGGAGG...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTATGAATGAGACTGCCTaGAGTCTAGTAATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVMNETA*SLVIKA
Trigger: TGCTTTGATTACTAGACTTCAGGCAGTCTCATTCAT...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCATATTCTGCAGCTATaGCAGTTCTCCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGHILQL*QFSGSH
Trigger: ATGGCTTCCGGAGAACTGGCATAGCTGCAGAATATG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TATACACATGCCATCATGGTTTGCTGCACCCATCAACCCATCATCTACATTAGGCATATTCTGCAGCTATaGCAGTTCTCCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: YTHAIMVCCTHQPIIYIRHILQL*QFSGSH
Trigger: ATGGCTTCCGGAGAACTGGCATAGCTGCAGAATATG...CCTAATGTAGATGATGGGTTGATGGGTGCAGCAAACCATGATGGCATGTGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAACATATTCTGCAGCTATaGCAGTTCTCCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEHILQL*QFSGSH
Trigger: ATGGCTTCCGGAGAACTGGCATAGCTGCAGAATATG...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGCATATTCTGCAGCTATaGCAGTTCTCCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERHILQL*QFSGSH
Trigger: ATGGCTTCCGGAGAACTGGCATAGCTGCAGAATATG...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTAGTAAGAAAGCTGCCTaGTGGTTTCCTTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGSKKAA*WFPSVR
Trigger: CCTCACAGAAGGAAACCAGCAGGCAGCTTTCTTACT...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTGCTGCTTTTCTCTACTaGTGGTTAAATACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVAAFLY*WLNTFW
Trigger: CCAGAAAGTATTTAACCAGCAGTAGAGAAAAGCAGC...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTGTTTCAAACTCAGCTaGTTTTCTCTACTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVCFKLS*FSLLLV
Trigger: AACCAGCAGTAGAGAAAAGCAGCTGAGTTTGAAACA...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGCCTGCTGCTGTTCGTTaGCTAACATTTCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEPAAVR*LTFHKV
Trigger: GACTTTGTGAAATGTTAGGCAACGAACAGCAGCAGG...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATCCAGGTCTTCCTGCTaGTGTTCGTTGCCTAACATT +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEESRSSC*CSLPNI
Trigger: AATGTTAGGCAACGAACAGCAGCAGGAAGACCTGGA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATTTTCCAGGTCTTCCTaGTGCTGTTCGTTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEFSRSS*CCSLPN
Trigger: GTTAGGCAACGAACAGCAGCAGGAAGACCTGGAAAA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCGCTCCATATCATACTaGTGGAGCCAATCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGERSISY*WSQSTS
Trigger: AGAAGTTGATTGGCTCCAGCAGTATGATATGGAGCG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAAAGGCTCTGAGCCAGTaGCTGCTGAAGCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGKALSQ*LLKLLL
Trigger: GAGCAAGAGCTTCAGCAGGCACTGGCTCAGAGCCTT...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAATATGCAGTGCATGCTaGCAACCCAGGAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEICSAC*QPRSLF
Trigger: GAACAAACTCCTGGGTTGGCAGCATGCACTGCATAT...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACAAATATGCAGTGCATaGTGCCAACCCAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEQICSA*CQPRSL
Trigger: CAAACTCCTGGGTTGGCAGCATGCACTGCATATTTG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGCAAATATGCAGTGCATaGTGCCAACCCAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERQICSA*CQPRSL
Trigger: CAAACTCCTGGGTTGGCAGCATGCACTGCATATTTG...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGTAACAAATATGCAGTaGATGCTGCCAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGVTNMQ*MLPTQE
Trigger: CTCCTGGGTTGGCAGCATGCACTGCATATTTGTTAC...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGATCCCTAAGTATTCCTaGTGGGGAGTCCCAATTGGA +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERIPKYS*WGVPIG
Trigger: TCCAATTGGGACTCCCCAGCAGGAATACTTAGGGAT...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTACAAATATTTTCCTCTaGTCTAAACTACTCTGGCGT +
Preference number: 4 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCTNIFL*SKLLWR
Trigger: ACGCCAGAGTAGTTTAGAGCAGAGGAAAATATTTGT...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp AACAACAAACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAATTGTGCAAACTGCCTaGAACGGAAGCACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: NNKPHQHSPAEISTGSQRIVQTA*NGSTQS
Trigger: GGACTGAGTGCTTCCGTTGCAGGCAGTTTGCACAAT...TCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTTGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTTTGTTTCGCTCCACTaGGTCGAAGCACCACATTTT +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEFVSLH*VEAPHF
Trigger: AAAATGTGGTGCTTCGACCCAGTGGAGCGAAACAAA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATGGAGGGATCTGTCATaGCCTTGTTGTTCGATGATG +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEWRDLS*PCCSMM
Trigger: CATCATCGAACAACAAGGCCATGACAGATCCCTCCA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACAGAAGAGTGTTCCTTaGATCCAGCTCTGCTACCAT +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEQKSVP*IQLCYH
Trigger: ATGGTAGCAGAGCTGGATCCAAGGAACACTCTTCTG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATTGGCAGAGGGAGTCTaGCTTGAAACATTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEELAEGV*LETLVL
Trigger: CAGGACTAATGTTTCAAGCCAGACTCCCTCTGCCAA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGATCCCAAACTTCTTTTaGCAGAGGGAGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERIPNFF*QRESGL
Trigger: CAAGCCAGACTCCCTCTGCCAAAAGAAGTTTGGGAT...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTTGAGAGGCTTTCAATaGTCTAGAAATTGCCATATG +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFLRGFQ*SRNCHM
Trigger: CATATGGCAATTTCTAGACCATTGAAAGCCTCTCAA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAATTTCACAAAGTCTCTaGCTGAGGGCCACAGAACGT +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEISQSL*LRATER
Trigger: ACGTTCTGTGGCCCTCAGCCAGAGACTTTGTGAAAT...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTATTTCACAAAGTCTCTaGCTGAGGGCCACAGAACGT +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGISQSL*LRATER
Trigger: ACGTTCTGTGGCCCTCAGCCAGAGACTTTGTGAAAT...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTTGCAAATCCGGTATCTaGGCTGCTAGTTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGCKSGI*AASWLI
Trigger: GATAAGCCAACTAGCAGCCCAGATACCGGATTTGCA...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATGCAAATCCGGTATCTaGGCTGCTAGTTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEECKSGI*AASWLI
Trigger: GATAAGCCAACTAGCAGCCCAGATACCGGATTTGCA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTCCATATCATACTGCTaGAGCCAATCAACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGESISYC*SQSTSP
Trigger: GGGAGAAGTTGATTGGCTCCAGCAGTATGATATGGA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGCCTAAGTATTCCTGCTaGGGAGTCCCAATTGGAGAA +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERPKYSC*GVPIGE
Trigger: TTCTCCAATTGGGACTCCCCAGCAGGAATACTTAGG...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CCTCAGACATATAGCACACATGGAGACAACTTACTAATTGTGTGTAAGTATGATGACCAACCTGGAACCTaGTCCAGACCCTCACCCACT +
Preference number: 4 (lower is better)
Translates to: PQTYSTHGDNLLIVCKYDDQPGT*SRPSPT
Trigger: AGTGGGTGAGGGTCTGGACCAGGTTCCAGGTTGGTC...ATCATACTTACACACAATTAGTAAGTTGTCTCCATGTGTGCTATATGTCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp CAAATAATGTGGCCACAGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAATGTTCTTCTTTGTTCTaGCATCTGACTGGACCAACC +
Preference number: 4 (lower is better)
Translates to: QIMWPQLPENLVVAQLGKCSSLF*HLTGPT
Trigger: GGTTGGTCCAGTCAGATGCCAGAACAAAGAAGAACA...TTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTGTGGCCACATTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp ATCAACCCATCATCTACATTAGGTATTTCTCTTAATGCTATCCCTCCCCTAGCCAGAAGCCTGATTGTCTaGGTAAGAAAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: INPSSTLGISLNAIPPLARSLIV*VRKLPA
Trigger: AGCAGGCAGCTTTCTTACTCAGACAATCAGGCTTCT...GGCTAGGGGAGGGATAGCATTAAGAGAAATACCTAATGTAGATGATGGGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR TCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAAGAAGCCTGATTGTCTaGGTAAGAAAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKRSLIV*VRKLPA
Trigger: AGCAGGCAGCTTTCTTACTCAGACAATCAGGCTTCT...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCAGAAGCCTGATTGTCTaGGTAAGAAAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSRSLIV*VRKLPA
Trigger: AGCAGGCAGCTTTCTTACTCAGACAATCAGGCTTCT...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CAAATAATGTGGCCACAGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAATGTCCTATTCTCTTCTaGCTGTTTCAAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QIMWPQLPENLVVAQLGKCPILF*LFQTQL
Trigger: CAGCTGAGTTTGAAACAGTCAGAAGAGAATAGGACA...TTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTGTGGCCACATTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGAGATCAAGAGAATCTTaGATTGAACGAGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGERSRES*IERGGS
Trigger: ACTCCCTCCTCGTTCAATTCAAGATTCTCTTGATCT...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAAGGTGAATTTCTTTaGAGGTGTAGAAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGEGEFL*RCRRAG
Trigger: ACCAGCCCTTCTACACCTTCAAAGAAATTCACCTTC...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGCAATCAACTTCTCCCTaGGATCCTTCTGGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERQSTSP*DPSGVL
Trigger: CAAAACTCCAGAAGGATCTCAGGGAGAAGTTGATTG...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTTCCGTGCTAAGTGACTaGGAGTTCTTTTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGSVLSD*EFFSVS
Trigger: GGAAACAGAAAAGAACTCTCAGTCACTTAGCACGGA...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACACTTCCGTGCTAAGTaGCTGAGAGTTCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEHFRAK*LRVLFC
Trigger: ACAGAAAAGAACTCTCAGTCACTTAGCACGGAAGTG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAACACTTCCGTGCTAAGTaGCTGAGAGTTCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEHFRAK*LRVLFC
Trigger: ACAGAAAAGAACTCTCAGTCACTTAGCACGGAAGTG...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACACACATTTCTCAGGTaGATGGACTCTTTGACACCT +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEHTFLR*MDSLTP
Trigger: AGGTGTCAAAGAGTCCATTCACCTGAGAAATGTGTG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTGAGCTGGCTTTCCAGTaGATTTTACTAATAAGGAAA +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVELAFQ*ILLIRK
Trigger: TTTCCTTATTAGTAAAATTCACTGGAAAGCCAGCTC...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTAGTGATTCTCTCATGTaGTGGTGGGTTTTTAAATGT +
Preference number: 4 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVSDSLM*WWVFKC
Trigger: ACATTTAAAAACCCACCATCACATGAGAGAATCACT...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACTCCTGCCCAAGACATaGAGATCAAATCAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVELLPKT*RSNQVS
Trigger: AGAAACCTGATTTGATCTTCATGTCTTGGGCAGGAG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGATCTGTGAGGTCCTGCTaGCCAGAATGGCTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGSVRSC*PEWLQN
Trigger: GTTTTGGAGCCATTCTGGGCAGCAGGACCTCACAGA...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TGTGTCAGTTTGCTGAGAATGATGGTTTTCAGCTTCATCCATGTCTCTGCAAAGAGTAAGAAAGCTGCCTaGTGGTTTCCTTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: CVSLLRMMVFSFIHVSAKSKKAA*WFPSVR
Trigger: CCTCACAGAAGGAAACCAGCAGGCAGCTTTCTTACT...CTTTGCAGAGACATGGATGAAGCTGAAAACCATCATTCTCAGCAAACTGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAACCTTGGATCCAGCTCTaGTACCATAAAAGGATGATG +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEPWIQL*YHKRMM
Trigger: CATCATCCTTTTATGGTAGCAGAGCTGGATCCAAGG...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCCTTGGATCCAGCTCTaGTACCATAAAAGGATGATG +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGPWIQL*YHKRMM
Trigger: CATCATCCTTTTATGGTAGCAGAGCTGGATCCAAGG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGAGCCTGTTAAATTTGTaGCTGACAAGAGCACACTTC +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAESLLNL*LTRAHF
Trigger: GAAGTGTGCTCTTGTCAGGCACAAATTTAACAGGCT...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCAATGGTCTAGAAATTaGCATATGTGCACTCCAACC +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEQWSRN*HMCTPT
Trigger: GGTTGGAGTGCACATATGGCAATTTCTAGACCATTG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAACCTGCTGCTGTTCGTTaGCTAACATTTCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEPAAVR*LTFHKV
Trigger: GACTTTGTGAAATGTTAGGCAACGAACAGCAGCAGG...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCTTTTCCAGGTCTTCCTaGTGCTGTTCGTTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSFSRSS*CCSLPN
Trigger: GTTAGGCAACGAACAGCAGCAGGAAGACCTGGAAAA...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAATATGCAGTGCATGCTaGCAACCCAGGAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKICSAC*QPRSLF
Trigger: GAACAAACTCCTGGGTTGGCAGCATGCACTGCATAT...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CCTCAGACATATAGCACACATGGAGACAACTTACTAATTGTGTGTAAGTATGATCCCCAACATGCTAACTaGCCCATCCCCAATTCTGGG +
Preference number: 4 (lower is better)
Translates to: PQTYSTHGDNLLIVCKYDPQHAN*PIPNSG
Trigger: CCCAGAATTGGGGATGGGGCAGTTAGCATGTTGGGG...ATCATACTTACACACAATTAGTAAGTTGTCTCCATGTGTGCTATATGTCTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp CAAATAATGTGGCCACAGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAGCAAAGCACTCTTCTTaGGACACTACTCATATTCTG +
Preference number: 4 (lower is better)
Translates to: QIMWPQLPENLVVAQLGKAKHSS*DTTHIL
Trigger: CAGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGC...TTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTGTGGCCACATTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAACAGAAGAGTGTTCCTTaGATCCAGCTCTGCTACCAT +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKQKSVP*IQLCYH
Trigger: ATGGTAGCAGAGCTGGATCCAAGGAACACTCTTCTG...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAATCCCAAACTTCTTTTaGCAGAGGGAGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKIPNFF*QRESGL
Trigger: CAAGCCAGACTCCCTCTGCCAAAAGAAGTTTGGGAT...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTGGAATTTTCTTCCATaGGATACCTTGTTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFWNFLP*DTLFKQ
Trigger: TTGCTTAAACAAGGTATCCCATGGAAGAAAATTCCA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATCCATATCATACTGCTaGAGCCAATCAACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEESISYC*SQSTSP
Trigger: GGGAGAAGTTGATTGGCTCCAGCAGTATGATATGGA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCCATATCATACTGCTaGAGCCAATCAACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERSISYC*SQSTSP
Trigger: GGGAGAAGTTGATTGGCTCCAGCAGTATGATATGGA...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TCCATCCATTTTATTGGAACACTTTTATGTGACTTGAATCTGGTGTTAGGTTGTGCTGGTTTCCTTCTGTaGGGTCCTGCTGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SIHFIGTLLCDLNLVLGCAGFLL*GPAAQN
Trigger: ATTCTGGGCAGCAGGACCTCACAGAAGGAAACCAGC...ACAACCTAACACCAGATTCAAGTCACATAAAAGTGTTCCAATAAAATGGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp TATACACATGCCATCATGGTTTGCTGCACCCATCAACCCATCATCTACATTAGGTGTCCTATTCTCTTCTaGCTGTTTCAAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: YTHAIMVCCTHQPIIYIRCPILF*LFQTQL
Trigger: CAGCTGAGTTTGAAACAGTCAGAAGAGAATAGGACA...CCTAATGTAGATGATGGGTTGATGGGTGCAGCAAACCATGATGGCATGTGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR TCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAATGTCCTATTCTCTTCTaGCTGTTTCAAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVECPILF*LFQTQL
Trigger: CAGCTGAGTTTGAAACAGTCAGAAGAGAATAGGACA...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGAAAGAGGAACTGGCTaGGGAAGAAATCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKERGTG*GRNPKL
Trigger: AAGTTTGGGATTTCTTCCTCAGCCAGTTCCTCTTTC...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGTCTCTCTGCTGTAGCTaGAATGGCATTTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAESLCCS*NGIFNL
Trigger: AAGGTTAAAAATGCCATTTCAGCTACAGCAGAGAGA...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAACACATGCTTTACAAATaGTGGAGTGCTGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEHMLYK*WSAEPQ
Trigger: TTGAGGTTCAGCACTCCATCATTTGTAAAGCATGTG...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACACATGCTTTACAAATaGTGGAGTGCTGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEHMLYK*WSAEPQ
Trigger: TTGAGGTTCAGCACTCCATCATTTGTAAAGCATGTG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAAAGAGAATCTTGAATTaGACGAGGAGGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEKRILN*TRREWF
Trigger: AAACCACTCCCTCCTCGTTCAATTCAAGATTCTCTT...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGTATTTTCAGTGCAATaGGATGACAGGGTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGVFSVQ*DDRVRY
Trigger: ATACCTGACCCTGTCATCTCATTGCACTGAAAATAC...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAGTATTTTCAGTGCAATaGGATGACAGGGTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEVFSVQ*DDRVRY
Trigger: ATACCTGACCCTGTCATCTCATTGCACTGAAAATAC...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGAAGGTGAATTTCTTTaGAGGTGTAGAAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKEGEFL*RCRRAG
Trigger: ACCAGCCCTTCTACACCTTCAAAGAAATTCACCTTC...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGGAGTTGTTAAACTCTTaGAGACTTAACTCGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEELLNS*RLNSVA
Trigger: AGCTACCGAGTTAAGTCTTCAAGAGTTTAACAACTC...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGAGCCTCTTGGATTTTTaGTACCTCCAGGTCATTGTA +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERSLLDF*YLQVIV
Trigger: TACAATGACCTGGAGGTATCAAAAATCCAAGAGGCT...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGGTTACAGACTTGAGTaGAACTACTCAAGGAACATA +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEGYRLE*NYSRNI
Trigger: TATGTTCCTTGAGTAGTTTCACTCAAGTCTGTAACC...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGTCATTAGTGTAACATaGAGAGCTGGCTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKVISVT*RAGFPV
Trigger: CACTGGAAAGCCAGCTCTTCATGTTACACTAATGAC...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCTATCCTCCCTATGTTTaGGAGACAGAGATGCTAGCA +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSYPPYV*ETEMLA
Trigger: TGCTAGCATCTCTGTCTCTCAAACATAGGGAGGATA...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTCAACCTCATTTCCTCTaGATCCTTACTTGGTACTTT +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSQPHFL*ILTWYF
Trigger: AAAGTACCAAGTAAGGATGCAGAGGAAATGAGGTTG...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCAACCTCATTTCCTCTaGATCCTTACTTGGTACTTT +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEQPHFL*ILTWYF
Trigger: AAAGTACCAAGTAAGGATGCAGAGGAAATGAGGTTG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAAGCTATTCCACTTCCTaGTACAGTCTTAATCGATCC +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVESYSTS*YSLNRS
Trigger: GGATCGATTAAGACTGTAGCAGGAAGTGGAATAGCT...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTAGCTATTCCACTTCCTaGTACAGTCTTAATCGATCC +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGSYSTS*YSLNRS
Trigger: GGATCGATTAAGACTGTAGCAGGAAGTGGAATAGCT...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGCTGCTTTTCTCTACTaGTGGTTAAATACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEAAFLY*WLNTFW
Trigger: CCAGAAAGTATTTAACCAGCAGTAGAGAAAAGCAGC...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTGTTTCAAACTCAGCTaGTTTTCTCTACTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGECFKLS*FSLLLV
Trigger: AACCAGCAGTAGAGAAAAGCAGCTGAGTTTGAAACA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTTTAACAAGCAAGTGTaGAAAGCGTCTGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEFNKQV*KASDKC
Trigger: GCACTTATCAGACGCTTTGCACACTTGCTTGTTAAA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTTTTAACAAGCAAGTGTaGAAAGCGTCTGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSFNKQV*KASDKC
Trigger: GCACTTATCAGACGCTTTGCACACTTGCTTGTTAAA...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGAGCCTGTTAAATTTGTaGCTGACAAGAGCACACTTC +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERSLLNL*LTRAHF
Trigger: GAAGTGTGCTCTTGTCAGGCACAAATTTAACAGGCT...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTAGCCTGTTAAATTTGTaGCTGACAAGAGCACACTTC +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGSLLNL*LTRAHF
Trigger: GAAGTGTGCTCTTGTCAGGCACAAATTTAACAGGCT...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAAGCCTGTTAAATTTGTaGCTGACAAGAGCACACTTC +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVESLLNL*LTRAHF
Trigger: GAAGTGTGCTCTTGTCAGGCACAAATTTAACAGGCT...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTGGAATGATGACTTGCTaGCCAATCTTATTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSGMMTC*PILLLS
Trigger: GCTTAACAATAAGATTGGGCAGCAAGTCATCATTCC...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGAGAAATTGCCATATGTaGACTCCAACCAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAERNCHM*TPTKGK
Trigger: TTTACCCTTGGTTGGAGTGCACATATGGCAATTTCT...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR GCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGTTGAATATCATCTTCTaGAAATCCGGTATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAELNIIF*KSGIWA
Trigger: AGCCCAGATACCGGATTTGCAGAAGATGATATTCAA...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCTCATCAGAACCCAATaGATCCACAAAGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGLIRTQ*IHKGVV
Trigger: AACAACTCCTTTGTGGATGCATTGGGTTCTGATGAG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACTCATCAGAACCCAATaGATCCACAAAGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVELIRTQ*IHKGVV
Trigger: AACAACTCCTTTGTGGATGCATTGGGTTCTGATGAG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCCGATCTCGATCACTCTaGACGGCAGCCTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSRSRSL*TAASWI
Trigger: AATCCAAGAGGCTGCCGTGCAGAGTGATCGAGATCG...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGATATGCAGTGCATGCTaGCAACCCAGGAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLICSAC*QPRSLF
Trigger: GAACAAACTCCTGGGTTGGCAGCATGCACTGCATAT...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TCCATCCATTTTATTGGAACACTTTTATGTGACTTGAATCTGGTGTTAGGTTGTTGGGGACAAGAGGTGTaGACACCCACATGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SIHFIGTLLCDLNLVLGCWGQEV*TPTCGL
Trigger: GAGACCACATGTGGGTGTGCACACCTCTTGTCCCCA...ACAACCTAACACCAGATTCAAGTCACATAAAAGTGTTCCAATAAAATGGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp TGTGTCAGTTTGCTGAGAATGATGGTTTTCAGCTTCATCCATGTCTCTGCAAAGCCTTCTGTGCTGCACTaGATGATCACATGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: CVSLLRMMVFSFIHVSAKPSVLH*MITCSQ
Trigger: TTGAGAACATGTGATCATGCAGTGCAGCACAGAAGG...CTTTGCAGAGACATGGATGAAGCTGAAAACCATCATTCTCAGCAAACTGACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAAGAAAGCTGCCTGCTaGTTTCCTTCTGTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRKKAAC*FPSVRS
Trigger: GGACCTCACAGAAGGAAACCAGCAGGCAGCTTTCTT...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATGGTTAAATACTTTCTaGAGGGATCTGTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEWLNTF*RDLSWP
Trigger: AGGCCATGACAGATCCCTCCAGAAAGTATTTAACCA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CATTACCCTCACTTTTTACATTTAAAACCATCAACCCTTCTGTGCTGCACTGCACAGAAGAGTGTTCCTTaGATCCAGCTCTGCTACCAT +
Preference number: 4 (lower is better)
Translates to: HYPHFLHLKPSTLLCCTAQKSVP*IQLCYH
Trigger: ATGGTAGCAGAGCTGGATCCAAGGAACACTCTTCTG...TGCAGTGCAGCACAGAAGGGTTGATGGTTTTAAATGTAAAAAGTGAGGGTAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGATCCCAAACTTCTTTTaGCAGAGGGAGTCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLIPNFF*QRESGL
Trigger: CAAGCCAGACTCCCTCTGCCAAAAGAAGTTTGGGAT...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCTCCATATCATACTGCTaGAGCCAATCAACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSSISYC*SQSTSP
Trigger: GGGAGAAGTTGATTGGCTCCAGCAGTATGATATGGA...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR CAA 72 bp CTCCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTaGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTC +
Preference number: 4 (lower is better)
Translates to: LQFLSFGLALSC*LLPHQVEFQIL
Trigger: GAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAATGTCCTATTCTCTTCTaGCTGTTTCAAACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKCPILF*LFQTQL
Trigger: CAGCTGAGTTTGAAACAGTCAGAAGAGAATAGGACA...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGGAAAGAGGAACTGGCTaGGGAAGAAATCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLERGTG*GRNPKL
Trigger: AAGTTTGGGATTTCTTCCTCAGCCAGTTCCTCTTTC...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGCAAATGATGGAGTGCTaGACCTCAAACTCCAAATTA +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERQMMEC*TSNSKL
Trigger: TAATTTGGAGTTTGAGGTTCAGCACTCCATCATTTG...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCAAGAGAATCTTGAATTaGACGAGGAGGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSKRILN*TRREWF
Trigger: AAACCACTCCCTCCTCGTTCAATTCAAGATTCTCTT...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCGCGAGAGAGCCACATTaGAGCTATATCGTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSAREPH*SYIVSN
Trigger: ATTTGAAACGATATAGCTTCAATGTGGCTCTCTCGC...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGATGACTCAGAGATGGTaGAGCATCTCTCTTACTTAT +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERMTQRW*SISLTY
Trigger: ATAAGTAAGAGAGATGCTTCACCATCTCTGAGTCAT...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATTATCATCATCTTCATaGCTCAGAGATGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEELSSSS*LRDGEA
Trigger: TGCTTCACCATCTCTGAGTCATGAAGATGATGATAA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAGAGTTGTTAAACTCTTaGAGACTTAACTCGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEELLNS*RLNSVA
Trigger: AGCTACCGAGTTAAGTCTTCAAGAGTTTAACAACTC...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCATGAGCCGGTACGAATaGGGCAGATTTCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAMSRYE*GRFPVS
Trigger: TGAGACAGGAAATCTGCCTCATTCGTACCGGCTCAT...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGAAAAGGTTACAGACTTaGGTGAAACTACTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEKRLQT*VKLLKE
Trigger: TTCCTTGAGTAGTTTCACTCAAGTCTGTAACCTTTT...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATTTTGTCCCTACCTCTaGGAACTAAAGAATAATCCC +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEFCPYL*ELKNNP
Trigger: GGGATTATTCTTTAGTTCTCAGAGGTAGGGACAAAA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR TCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCCCTCCTGGGTTCAAGTaGTTCTCTCATGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSPPGFK*FSHVMV
Trigger: CACCATCACATGAGAGAATCACTTGAACCCAGGAGG...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR TCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCTGGAGTTAATTAACTaGTCTGTAAGAACCACTGCA +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGLELIN*SVRTTA
Trigger: TGCAGTGGTTCTTACAGATCAGTTAATTAACTCCAG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAGTAGACCAGTTTAGTTaGCTGTTCTTCTTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEVDQFS*LFFFVL
Trigger: CAGAACAAAGAAGAACAGTCAACTAAACTGGTCTAC...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGACATATTCTGCAGCTATaGCAGTTCTCCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRHILQL*QFSGSH
Trigger: ATGGCTTCCGGAGAACTGGCATAGCTGCAGAATATG...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAAAGAAGCTGTTATCTTaGAGAGTTAACATTAGGCGG +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEKKLLS*RVNIRR
Trigger: CCGCCTAATGTTAACTCTGCAAGATAACAGCTTCTT...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTAAGAAGCTGTTATCTTaGAGAGTTAACATTAGGCGG +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGKKLLS*RVNIRR
Trigger: CCGCCTAATGTTAACTCTGCAAGATAACAGCTTCTT...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCAACCTCATTTCCTCTaGATCCTTACTTGGTACTTT +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGQPHFL*ILTWYF
Trigger: AAAGTACCAAGTAAGGATGCAGAGGAAATGAGGTTG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTTCTGTGAGGTCCTGCTaGCCAGAATGGCTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: IFFILSIIDGHLPLPSLFSVRSC*PEWLQN
Trigger: GTTTTGGAGCCATTCTGGGCAGCAGGACCTCACAGA...AAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGCTGCTTTTCTCTACTaGTGGTTAAATACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGAAFLY*WLNTFW
Trigger: CCAGAAAGTATTTAACCAGCAGTAGAGAAAAGCAGC...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATTTAACAAGCAAGTGTaGAAAGCGTCTGATAAGTGC +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEFNKQV*KASDKC
Trigger: GCACTTATCAGACGCTTTGCACACTTGCTTGTTAAA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAGGAATGATGACTTGCTaGCCAATCTTATTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEGMMTC*PILLLS
Trigger: GCTTAACAATAAGATTGGGCAGCAAGTCATCATTCC...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGGGAATGATGACTTGCTaGCCAATCTTATTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERGMMTC*PILLLS
Trigger: GCTTAACAATAAGATTGGGCAGCAAGTCATCATTCC...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGATCCAGGTCTTCCTGCTaGTGTTCGTTGCCTAACATT +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGSRSSC*CSLPNI
Trigger: AATGTTAGGCAACGAACAGCAGCAGGAAGACCTGGA...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAGTAACAAATATGCAGTaGATGCTGCCAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRVTNMQ*MLPTQE
Trigger: CTCCTGGGTTGGCAGCATGCACTGCATATTTGTTAC...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCGTAATGCCCCTCTCTTaGAAAGAGAACAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSVMPLS*KENKLS
Trigger: TGACAGTTTGTTCTCTTTGCAAGAGAGGGGCATTAC...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCGTTGCCGCTCTACTTTaGCTCAACTCAGAGCACCTA +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSVAALL*LNSEHL
Trigger: TAGGTGCTCTGAGTTGAGGCAAAGTAGAGCGGCAAC...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGACTCTGTCACTCAGACTaGAGTGCAATGATGCGATCT +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRLCHSD*SAMMRS
Trigger: AGATCGCATCATTGCACTGCAGTCTGAGTGACAGAG...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACCCACTCTATTCTTATaGCAATGGACATACCTATAC +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEPTLFL*QWTYLY
Trigger: GTATAGGTATGTCCATTGGCATAAGAATAGAGTGGG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTTCATTGCCATATGTaGACTCCAACCAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEFHCHM*TPTKGK
Trigger: TTTACCCTTGGTTGGAGTGCACATATGGCAATGAAA...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415516.5
CDS-3UTR CCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGCAAAGCACTCTTCTTaGGACACTACTCATATTCTG +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKAKHSS*DTTHIL
Trigger: CAGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGC...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp AACAACAAACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGATGGTTAAATACTTTCTaGAGGGATCTGTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: NNKPHQHSPAEISTGSQRWLNTF*RDLSWP
Trigger: AGGCCATGACAGATCCCTCCAGAAAGTATTTAACCA...TCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTTGTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAGGAAAGGGGCACTCTTaGTTTATTCCAGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRGKGHS*FIPASV
Trigger: TACACTGGCTGGAATAAACCAAGAGTGCCCCTTTCC...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTTTGAGAGGCTTTCAATaGTCTAGAAATTGCCATATG +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSLRGFQ*SRNCHM
Trigger: CATATGGCAATTTCTAGACCATTGAAAGCCTCTCAA...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR CCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGCTGGGGAGTCCCAATTaGAGAAATATTATCTTTCTA +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAELGSPN*RNIIFL
Trigger: TAGAAAGATAATATTTCTCCAATTGGGACTCCCCAG...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTAAGCCAGACAGTAAATaGTTAAATGCCCAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGKPDSK*LNAQGL
Trigger: CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTT...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGAAGCCAGACAGTAAATaGTTAAATGCCCAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERKPDSK*LNAQGL
Trigger: CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTT...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCTGCTCTAAACTACTCTaGCGTTTTCTACCACTCTAC +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSCSKLL*RFLPLY
Trigger: GTAGAGTGGTAGAAAACGCCAGAGTAGTTTAGAGCA...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR CAA 72 bp CAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTaGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: QFLSFGLALSCL*LPHQVEFQILL
Trigger: AAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
3UTR CAA 72 bp TTTACCAGAAGAACACTCTTCTTATCCTCCCTATGTTaGAGAGACAGAGATGCTAGCATTCTTCCTTATCCC +
Preference number: 4 (lower is better)
Translates to: FTRRTLFLSSLC*RDRDASILPYP
Trigger: GGGATAAGGAAGAATGCTAGCATCTCTGTCTCTCAAACATAGGGAGGATAAGAAGAGTGTTCTTCTGGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCAATTCACCTTTATTCTaGTCCTTGTGCCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSNSPLF*SLCQRQ
Trigger: TTGCCTTTGGCACAAGGATCAGAATAAAGGTGAATT...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAATCTCTCTGCTGTAGCTaGAATGGCATTTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKSLCCS*NGIFNL
Trigger: AAGGTTAAAAATGCCATTTCAGCTACAGCAGAGAGA...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGGTGTGCACACACATGTaGATATATCCCTACGAAACA +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLVCTHM*IYPYET
Trigger: TGTTTCGTAGGGATATATTCACATGTGTGTGCACAC...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCAAGCATGCCATAAGGTaGATGATTGTGGTTAAACAC +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSKHAIR*MIVVKH
Trigger: GTGTTTAACCACAATCATTCACCTTATGGCATGCTT...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGTAAGTATGATACAATaGATGAGACTGCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKVSMIQ*MRLPEV
Trigger: GACTTCAGGCAGTCTCATTCATTGTATCATACTTAC...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTTTTGTAATCCCAGTCTaGATACTTCGAATTCTGATA +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSFVIPV*ILRILI
Trigger: TATCAGAATTCGAAGTATGCAGACTGGGATTACAAA...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR GCA 90 bp ATCAACCCATCATCTACATTAGGTATTTCTCTTAATGCTATCCCTCCCCTAGCCAAGAAGCTGTTATCTTaGAGAGTTAACATTAGGCGG +
Preference number: 4 (lower is better)
Translates to: INPSSTLGISLNAIPPLAKKLLS*RVNIRR
Trigger: CCGCCTAATGTTAACTCTGCAAGATAACAGCTTCTT...GGCTAGGGGAGGGATAGCATTAAGAGAAATACCTAATGTAGATGATGGGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp CATTACCCTCACTTTTTACATTTAAAACCATCAACCCTTCTGTGCTGCACTGCAAGCTATTCCACTTCCTaGTACAGTCTTAATCGATCC +
Preference number: 4 (lower is better)
Translates to: HYPHFLHLKPSTLLCCTASYSTS*YSLNRS
Trigger: GGATCGATTAAGACTGTAGCAGGAAGTGGAATAGCT...TGCAGTGCAGCACAGAAGGGTTGATGGTTTTAAATGTAAAAAGTGAGGGTAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCGCTGCTTTTCTCTACTaGTGGTTAAATACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSAAFLY*WLNTFW
Trigger: CCAGAAAGTATTTAACCAGCAGTAGAGAAAAGCAGC...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CATTTGCCATTACCCTCACTTTTTACATTTAAAACCATCAACCCTTCTGTGCTGCCTTGGATCCAGCTCTaGTACCATAAAAGGATGATG +
Preference number: 4 (lower is better)
Translates to: HLPLPSLFTFKTINPSVLPWIQL*YHKRMM
Trigger: CATCATCCTTTTATGGTAGCAGAGCTGGATCCAAGG...CAGCACAGAAGGGTTGATGGTTTTAAATGTAAAAAGTGAGGGTAATGGCAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGAAAGCGTCTGATAAGTaGATTGAGTGGAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEKASDK*IEWNFL
Trigger: AAGAAAATTCCACTCAATGCACTTATCAGACGCTTT...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGAAAGCGTCTGATAAGTaGATTGAGTGGAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEKASDK*IEWNFL
Trigger: AAGAAAATTCCACTCAATGCACTTATCAGACGCTTT...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCGGAATGATGACTTGCTaGCCAATCTTATTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSGMMTC*PILLLS
Trigger: GCTTAACAATAAGATTGGGCAGCAAGTCATCATTCC...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCTTGGAATGATGACTTaGTGCCCAATCTTATTGTTA +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGLGMMT*CPILLL
Trigger: TAACAATAAGATTGGGCAGCAAGTCATCATTCCAAG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGCTTGGAATGATGACTTaGTGCCCAATCTTATTGTTA +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERLGMMT*CPILLL
Trigger: TAACAATAAGATTGGGCAGCAAGTCATCATTCCAAG...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAAGAAATTGCCATATGTaGACTCCAACCAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKRNCHM*TPTKGK
Trigger: TTTACCCTTGGTTGGAGTGCACATATGGCAATTTCT...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCTCCAGGTCTTCCTGCTaGTGTTCGTTGCCTAACATT +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNASRSSC*CSLPNI
Trigger: AATGTTAGGCAACGAACAGCAGCAGGAAGACCTGGA...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTTCCAGGTCTTCCTaGTGCTGTTCGTTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSFSRSS*CCSLPN
Trigger: GTTAGGCAACGAACAGCAGCAGGAAGACCTGGAAAA...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGACGCTCCATATCATACTaGTGGAGCCAATCAACTTCT +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRRSISY*WSQSTS
Trigger: AGAAGTTGATTGGCTCCAGCAGTATGATATGGAGCG...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCATATGCAGTGCATGCTaGCAACCCAGGAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSICSAC*QPRSLF
Trigger: GAACAAACTCCTGGGTTGGCAGCATGCACTGCATAT...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAATATGCAGTGCATaGTGCCAACCCAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAQICSA*CQPRSL
Trigger: CAAACTCCTGGGTTGGCAGCATGCACTGCATATTTG...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAATATGGTTTCATAAGCTaGTTAACCAAGCTGGTTACG +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKYGFIS*LTKLVT
Trigger: CGTAACCAGCTTGGTTAAGCAGCTTATGAAACCATA...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTGCCATCATGGTTTGCTaGACCCATCAACCCATCATC +
Preference number: 4 (lower is better)
Translates to: IFFILSIIDGHLPLPSLFAIMVC*THQPII
Trigger: GATGATGGGTTGATGGGTGCAGCAAACCATGATGGC...AAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CCA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTTCTCTGGTTACTGTATaGCAAATAATTTTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PIFVFWFGPELFVAPASSSLVTV*QIIFSD
Trigger: GTCACTGAAAATTATTTGCCATACAGTAACCAGAGA...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGATTTGTTTCGCTCCACTaGGTCGAAGCACCACATTTT +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRFVSLH*VEAPHF
Trigger: AAAATGTGGTGCTTCGACCCAGTGGAGCGAAACAAA...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp ACATTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTTGGAGGGATCTGTCATaGCCTTGTTGTTCGATGATG +
Preference number: 4 (lower is better)
Translates to: TFSLSCLSLMGICHYPHFWRDLS*PCCSMM
Trigger: CATCATCGAACAACAAGGCCATGACAGATCCCTCCA...AAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CCA 90 bp CCTCAGACATATAGCACACATGGAGACAACTTACTAATTGTGTGTAAGTATGATTTGGCAGAGGGAGTCTaGCTTGAAACATTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PQTYSTHGDNLLIVCKYDLAEGV*LETLVL
Trigger: CAGGACTAATGTTTCAAGCCAGACTCCCTCTGCCAA...ATCATACTTACACACAATTAGTAAGTTGTCTCCATGTGTGCTATATGTCTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTGGAATTTTCTTCCATaGGATACCTTGTTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEWNFLP*DTLFKQ
Trigger: TTGCTTAAACAAGGTATCCCATGGAAGAAAATTCCA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTTGAGAGGCTTTCAATaGTCTAGAAATTGCCATATG +
Preference number: 4 (lower is better)
Translates to: FVAPASSRIPNSPSAEERLRGFQ*SRNCHM
Trigger: CATATGGCAATTTCTAGACCATTGAAAGCCTCTCAA...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTGCAAATCCGGTATCTaGGCTGCTAGTTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSCKSGI*AASWLI
Trigger: GATAAGCCAACTAGCAGCCCAGATACCGGATTTGCA...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCTGGGGAGTCCCAATTaGAGAAATATTATCTTTCTA +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGLGSPN*RNIIFL
Trigger: TAGAAAGATAATATTTCTCCAATTGGGACTCCCCAG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAAAGCCAGACAGTAAATaGTTAAATGCCCAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKKPDSK*LNAQGL
Trigger: CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTT...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CACATTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTATACACATGCCATCATaGTTTGCTGCACCCATCAAC +
Preference number: 4 (lower is better)
Translates to: HIFFILSIIDGHLPLPSLIHMPS*FAAPIN
Trigger: GTTGATGGGTGCAGCAAACCATGATGGCATGTGTAT...AAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR TCA 90 bp TGGTTTGCTGCACCCATCAACCCATCATCTACATTAGGTATTTCTCTTAATGCTAATTCACCTTTATTCTaGTCCTTGTGCCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: WFAAPINPSSTLGISLNANSPLF*SLCQRQ
Trigger: TTGCCTTTGGCACAAGGATCAGAATAAAGGTGAATT...AGCATTAAGAGAAATACCTAATGTAGATGATGGGTTGATGGGTGCAGCAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR TCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCGAAGGTGAATTTCTTTaGAGGTGTAGAAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAEGEFL*RCRRAG
Trigger: ACCAGCCCTTCTACACCTTCAAAGAAATTCACCTTC...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR TCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGTTATCATCATCTTCATaGCTCAGAGATGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLLSSSS*LRDGEA
Trigger: TGCTTCACCATCTCTGAGTCATGAAGATGATGATAA...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAAGCCTCTTGGATTTTTaGTACCTCCAGGTCATTGTA +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGSLLDF*YLQVIV
Trigger: TACAATGACCTGGAGGTATCAAAAATCCAAGAGGCT...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCTCCGTGCTAAGTGACTaGGAGTTCTTTTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNASVLSD*EFFSVS
Trigger: GGAAACAGAAAAGAACTCTCAGTCACTTAGCACGGA...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGAATCAGCTACGGATGTaGGACCAAAGTTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLNQLRM*DQSFHK
Trigger: TTTATGGAAACTTTGGTCTCACATCCGTAGCTGATT...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCCACACATTTCTCAGGTaGATGGACTCTTTGACACCT +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSHTFLR*MDSLTP
Trigger: AGGTGTCAAAGAGTCCATTCACCTGAGAAATGTGTG...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAAAAAGGTTACAGACTTaGGTGAAACTACTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKKRLQT*VKLLKE
Trigger: TTCCTTGAGTAGTTTCACTCAAGTCTGTAACCTTTT...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AACAACAAACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAGAGCTGGCTTTCCAGTaGATTTTACTAATAAGGAAA +
Preference number: 4 (lower is better)
Translates to: NNKPHQHSPAEISTGSQRELAFQ*ILLIRK
Trigger: TTTCCTTATTAGTAAAATTCACTGGAAAGCCAGCTC...TCTTTGACTACCAGTGGAGATTTCAGCTGGACTATGTTGATGGGGTTTGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGTTTTGTCCCTACCTCTaGGAACTAAAGAATAATCCC +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLFCPYL*ELKNNP
Trigger: GGGATTATTCTTTAGTTCTCAGAGGTAGGGACAAAA...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCGCATTTATCAGTAGTTaGGCAAAACTGCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAAFISS*AKLLRP
Trigger: TGGCCTCAGCAGTTTTGCTCAACTACTGATAAATGC...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp CTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTACATTTAAAACCATCACTGTGCTGCACTGCATaGTCACATGTTCTCAACAAG +
Preference number: 4 (lower is better)
Translates to: LSLMGICHYPHFLHLKPSLCCTA*SHVLNK
Trigger: CTTGTTGAGAACATGTGATCATGCAGTGCAGCACAG...TGATGGTTTTAAATGTAAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR TCA 90 bp CACATTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTATCCTGTCTATCATTaGTGGGCATTTGCCATTACC +
Preference number: 4 (lower is better)
Translates to: HIFFILSIIDGHLPLPSLYPVYH*WAFAIT
Trigger: GGTAATGGCAAATGCCCATCAATGATAGACAGGATA...AAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATTTGTAATCCCAGTCTaGATACTTCGAATTCTGATA +
Preference number: 4 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEFVIPV*ILRILI
Trigger: TATCAGAATTCGAAGTATGCAGACTGGGATTACAAA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAAGCTATTCCACTTCCTaGTACAGTCTTAATCGATCC +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGSYSTS*YSLNRS
Trigger: GGATCGATTAAGACTGTAGCAGGAAGTGGAATAGCT...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp GGTTTTATGTTCCTGTGTCAGTTTGCTGAGAATGATGGTTTTCAGCTTCATCCAGCTGCTTTTCTCTACTaGTGGTTAAATACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GFMFLCQFAENDGFQLHPAAFLY*WLNTFW
Trigger: CCAGAAAGTATTTAACCAGCAGTAGAGAAAAGCAGC...TGGATGAAGCTGAAAACCATCATTCTCAGCAAACTGACACAGGAACATAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAAAAGCGTCTGATAAGTaGATTGAGTGGAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEKASDK*IEWNFL
Trigger: AAGAAAATTCCACTCAATGCACTTATCAGACGCTTT...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTAAAGCGTCTGATAAGTaGATTGAGTGGAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGKASDK*IEWNFL
Trigger: AAGAAAATTCCACTCAATGCACTTATCAGACGCTTT...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCGCTCCATATCATACTaGTGGAGCCAATCAACTTCT +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNARSISY*WSQSTS
Trigger: AGAAGTTGATTGGCTCCAGCAGTATGATATGGAGCG...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAGTAATGCCCCTCTCTTaGAAAGAGAACAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRVMPLS*KENKLS
Trigger: TGACAGTTTGTTCTCTTTGCAAGAGAGGGGCATTAC...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAGTAATGCCCCTCTCTTaGAAAGAGAACAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGVMPLS*KENKLS
Trigger: TGACAGTTTGTTCTCTTTGCAAGAGAGGGGCATTAC...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CATTTGCCATTACCCTCACTTTTTACATTTAAAACCATCAACCCTTCTGTGCTGGCAAAGCACTCTTCTTaGGACACTACTCATATTCTG +
Preference number: 4 (lower is better)
Translates to: HLPLPSLFTFKTINPSVLAKHSS*DTTHIL
Trigger: CAGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGC...CAGCACAGAAGGGTTGATGGTTTTAAATGTAAAAAGTGAGGGTAATGGCAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CCA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAATCTCTGGTTACTGTATaGCAAATAATTTTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: FLSFGLALSCLLLPHQVESLVTV*QIIFSD
Trigger: GTCACTGAAAATTATTTGCCATACAGTAACCAGAGA...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTTGGAATTTTCTTCCATaGGATACCTTGTTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGWNFLP*DTLFKQ
Trigger: TTGCTTAAACAAGGTATCCCATGGAAGAAAATTCCA...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCGCGAGAGAGCCACATTaGAGCTATATCGTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAAREPH*SYIVSN
Trigger: ATTTGAAACGATATAGCTTCAATGTGGCTCTCTCGC...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAATGACTCAGAGATGGTaGAGCATCTCTCTTACTTAT +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGMTQRW*SISLTY
Trigger: ATAAGTAAGAGAGATGCTTCACCATCTCTGAGTCAT...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAGGTTACAGACTTGAGTaGAACTACTCAAGGAACATA +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGGYRLE*NYSRNI
Trigger: TATGTTCCTTGAGTAGTTTCACTCAAGTCTGTAACC...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGAAAAGGTTACAGACTTaGGTGAAACTACTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLKRLQT*VKLLKE
Trigger: TTCCTTGAGTAGTTTCACTCAAGTCTGTAACCTTTT...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGATGGAACACTTTTATGTaGCTTGAATCTGGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRWNTFM*LESGVR
Trigger: CCTAACACCAGATTCAAGTCACATAAAAGTGTTCCA...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAAAGAAGCTGTTATCTTaGAGAGTTAACATTAGGCGG +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGKKLLS*RVNIRR
Trigger: CCGCCTAATGTTAACTCTGCAAGATAACAGCTTCTT...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGATGTTTCAAACTCAGCTaGTTTTCTCTACTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGCFKLS*FSLLLV
Trigger: AACCAGCAGTAGAGAAAAGCAGCTGAGTTTGAAACA...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCCAATGGTCTAGAAATTaGCATATGTGCACTCCAACC +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSQWSRN*HMCTPT
Trigger: GGTTGGAGTGCACATATGGCAATTTCTAGACCATTG...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAATGGTCTAGAAATTaGCATATGTGCACTCCAACC +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAQWSRN*HMCTPT
Trigger: GGTTGGAGTGCACATATGGCAATTTCTAGACCATTG...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR GCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGATTGAATATCATCTTCTaGAAATCCGGTATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGLNIIF*KSGIWA
Trigger: AGCCCAGATACCGGATTTGCAGAAGATGATATTCAA...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGATTTTCAACAACTCCTaGCCAAGACATGAAGATCAA +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLIFNNS*PRHEDQ
Trigger: TTGATCTTCATGTCTTGGGCAGGAGTTGTTGAAAAT...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAACCAGTTCATGGATTTaGTTATTCTATCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRTSSWI*LFYPAE
Trigger: CTCAGCAGGATAGAATAAGCAAATCCATGAACTGGT...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp TTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTATTTGTTTCGCTCCACTaGGTCGAAGCACCACATTTT +
Preference number: 4 (lower is better)
Translates to: FSLSCLSLMGICHYPHFLFVSLH*VEAPHF
Trigger: AAAATGTGGTGCTTCGACCCAGTGGAGCGAAACAAA...TAAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCAAATATACCTTTACCTaGCAGGTTCTACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSKYTFT*QVLQAG
Trigger: TCCTGCCTGTAGAACCTGCCAGGTAAAGGTATATTT...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454775.5
3UTR CAA 72 bp AATATGTGGTGTTTGGTTTTATGTTCCTGTGTCAGTTaGCTGAGAATGATGGTTTTCAGCTTCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: NMWCLVLCSCVS*LRMMVFSFIHV
Trigger: GACATGGATGAAGCTGAAAACCATCATTCTCAGCAAACTGACACAGGAACATAAAACCAAACACCACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR TCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCAATTCACCTTTATTCTaGTCCTTGTGCCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSNSPLF*SLCQRQ
Trigger: TTGCCTTTGGCACAAGGATCAGAATAAAGGTGAATT...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAATGATGGAGTGCTaGACCTCAAACTCCAAATTA +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAQMMEC*TSNSKL
Trigger: TAATTTGGAGTTTGAGGTTCAGCACTCCATCATTTG...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCGAGTTGTTAAACTCTTaGAGACTTAACTCGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAELLNS*RLNSVA
Trigger: AGCTACCGAGTTAAGTCTTCAAGAGTTTAACAACTC...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAACTAATGTAATGACCTaGAGAAGAAGTGCTACCAAT +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGTNVMT*RRSATN
Trigger: ATTGGTAGCACTTCTTCTTCAGGTCATTACATTAGT...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR TCA 90 bp CCTCAGACATATAGCACACATGGAGACAACTTACTAATTGTGTGTAAGTATGATAATCAGCTACGGATGTaGGACCAAAGTTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: PQTYSTHGDNLLIVCKYDNQLRM*DQSFHK
Trigger: TTTATGGAAACTTTGGTCTCACATCCGTAGCTGATT...ATCATACTTACACACAATTAGTAAGTTGTCTCCATGTGTGCTATATGTCTGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR TCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCGGTTACAGACTTGAGTaGAACTACTCAAGGAACATA +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAGYRLE*NYSRNI
Trigger: TATGTTCCTTGAGTAGTTTCACTCAAGTCTGTAACC...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGACTTGGAATGATGACTTaGTGCCCAATCTTATTGTTA +
Preference number: 4 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGLGMMT*CPILLL
Trigger: TAACAATAAGATTGGGCAGCAAGTCATCATTCCAAG...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTGAATATCATCTTCTaGAAATCCGGTATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSLNIIF*KSGIWA
Trigger: AGCCCAGATACCGGATTTGCAGAAGATGATATTCAA...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCTATGGTTTCATAAGCTaGTTAACCAAGCTGGTTACG +
Preference number: 4 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAYGFIS*LTKLVT
Trigger: CGTAACCAGCTTGGTTAAGCAGCTTATGAAACCATA...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTATGGTTTCATAAGCTaGTTAACCAAGCTGGTTACG +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSYGFIS*LTKLVT
Trigger: CGTAACCAGCTTGGTTAAGCAGCTTATGAAACCATA...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR GCA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGTCTCCATGTTTTAATTaGAGCCTGCACTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLSPCFN*SLHFKS
Trigger: AGATTTAAAGTGCAGGCTGCAATTAAAACATGGAGA...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp ATTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTCTTCATCCATGTCTCTaGAAAGGACATGAACTCATC +
Preference number: 4 (lower is better)
Translates to: IFFILSIIDGHLPLPSLFLHPCL*KGHELI
Trigger: GATGAGTTCATGTCCTTTGCAGAGACATGGATGAAG...AAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CCA 90 bp TTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTATGGTTAAATACTTTCTaGAGGGATCTGTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: FSLSCLSLMGICHYPHFLWLNTF*RDLSWP
Trigger: AGGCCATGACAGATCCCTCCAGAAAGTATTTAACCA...TAAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
3UTR CAA 72 bp GTTCAACATCCACTTATGAGTAAGAATATGTGGTGTTaGGTTTTATGTTCCTGTGTCAGTTTGCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: VQHPLMSKNMWC*VLCSCVSLLRM
Trigger: CATTCTCAGCAAACTGACACAGGAACATAAAACCAAACACCACATATTCTTACTCATAAGTGGATGTTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR TCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCAGTGATTCTCTCATGTaGTGGTGGGTTTTTAAATGT +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSSDSLM*WWVFKC
Trigger: ACATTTAAAAACCCACCATCACATGAGAGAATCACT...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR TCA 90 bp TCCATCCATTTTATTGGAACACTTTTATGTGACTTGAATCTGGTGTTAGGTTGTTGTTGTATTTGTTATTaGGCCTTTAAGGTTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SIHFIGTLLCDLNLVLGCCCICY*AFKVRP
Trigger: GGGCCTAACCTTAAAGGCTCAATAACAAATACAACA...ACAACCTAACACCAGATTCAAGTCACATAAAAGTGTTCCAATAAAATGGATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp CTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTACATTTAAAACCATCACAACCTCATTTCCTCTaGATCCTTACTTGGTACTTT +
Preference number: 4 (lower is better)
Translates to: LSLMGICHYPHFLHLKPSQPHFL*ILTWYF
Trigger: AAAGTACCAAGTAAGGATGCAGAGGAAATGAGGTTG...TGATGGTTTTAAATGTAAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp ATTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTTGTTTCAAACTCAGCTaGTTTTCTCTACTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: IFFILSIIDGHLPLPSLFCFKLS*FSLLLV
Trigger: AACCAGCAGTAGAGAAAAGCAGCTGAGTTTGAAACA...AAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR GCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCCTTGGAATGATGACTTaGTGCCCAATCTTATTGTTA +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSLGMMT*CPILLL
Trigger: TAACAATAAGATTGGGCAGCAAGTCATCATTCCAAG...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGATGGAATTTTCTTCCATaGGATACCTTGTTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRWNFLP*DTLFKQ
Trigger: TTGCTTAAACAAGGTATCCCATGGAAGAAAATTCCA...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTCCATAAAATAGCATaGAGCATTCTACGTTACTCC +
Preference number: 4 (lower is better)
Translates to: LNFILAIGLLASVVQNFSFHKIA*SILRYS
Trigger: GGAGTAACGTAGAATGCTCCATGCTATTTTATGGAA...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CCA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAGCAATAAAAAGATGTTaGAGGGCAGAAGTCTATTTA +
Preference number: 4 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRAIKRC*RAEVYL
Trigger: TAAATAGACTTCTGCCCTCCAACATCTTTTTATTGC...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258399.8
3UTR CAA 72 bp TTGGAGGGCAGAAGTCTATTTAGTTTTTGTATACACTaGCAAGAGTGCATTACTCAGTATAAAGCAAAATGG +
Preference number: 4 (lower is better)
Translates to: LEGRSLFSFCIH*QECITQYKAKW
Trigger: CCATTTTGCTTTATACTGAGTAATGCACTCTTGCAAGTGTATACAAAAACTAAATAGACTTCTGCCCTCCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR GCA 90 bp TTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTACATTTATTTGTAATCCCAGTCTaGATACTTCGAATTCTGATA +
Preference number: 4 (lower is better)
Translates to: LSCLSLMGICHYPHFLHLFVIPV*ILRILI
Trigger: TATCAGAATTCGAAGTATGCAGACTGGGATTACAAA...TAAATGTAAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CCA 90 bp TCCATCCATTTTATTGGAACACTTTTATGTGACTTGAATCTGGTGTTAGGTTGTTCTCTGGTTACTGTATaGCAAATAATTTTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SIHFIGTLLCDLNLVLGCSLVTV*QIIFSD
Trigger: GTCACTGAAAATTATTTGCCATACAGTAACCAGAGA...ACAACCTAACACCAGATTCAAGTCACATAAAAGTGTTCCAATAAAATGGATGGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CCA 90 bp ATTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTTCTCTGGTTACTGTATaGCAAATAATTTTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: IFFILSIIDGHLPLPSLFSLVTV*QIIFSD
Trigger: GTCACTGAAAATTATTTGCCATACAGTAACCAGAGA...AAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAAT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS CCA 90 bp GGAGCCCCCGGACAGACCCGCGGAAAGCACGGAGCCCGCGAGGAGTaGGAGGAGCCGAGGGTAATGGAAGTAGGGATACCGAACCCAAAG +
Preference number: 5 (lower is better)
Translates to: GAPGQTRGKHGAREE*EEPRVMEVGIPNPK
Trigger: CTTTGGGTTCGGTATCCCTACTTCCATTACCCTCGGCTCCTCCCACTCCTCGCGGGCTCCGTGCTTTCCGCGGGTCTGTCCGGGGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000338465.5
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACCTGTTCCCAAGCCTCTaGCTCTTGAAGGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: ACNGSTQSLSNLSLPGPNLFPSL*LLKALS
Trigger: GCTCAGAGCCTTCAAGAGCAAGAGGCTTGGGAACAG...GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS GCA 90 bp AAGGCAAAGCACTCTTCTTGGGACACTACTCATATTCTGCAGCTATaGCAGTTCTCCGGAAGCCATCAACTCAGCTGCGCCGAGGGTCCG +
Preference number: 5 (lower is better)
Translates to: KAKHSSWDTTHILQL*QFSGSHQLSCAEGP
Trigger: CGGACCCTCGGCGCAGCTGAGTTGATGGCTTCCGGAGAACTGGCATAGCTGCAGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000338465.5
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTCCAAGCCTCTTGCTCTaGAAGGCTCTGAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCPSLLL*KALSQC
Trigger: GCACTGGCTCAGAGCCTTCAAGAGCAAGAGGCTTGG...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCTGCAGTTGCTGCTGTaGGTGAGAGGAAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVLQLLL*VRGKGH
Trigger: GTGCCCCTTTCCTCTCACCAACAGCAGCAACTGCAG...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTGCCAACCCAGGAGTTaGTTCCTCACAAGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCCQPRS*FLTRPD
Trigger: GTCAGGCCTTGTGAGGAACAAACTCCTGGGTTGGCA...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTGCCTGCTGAAGCTCTaGCTCTTCCCTTTCACGCTC +
Preference number: 5 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVCLLKL*LFPFTL
Trigger: GAGCGTGAAAGGGAAGAGCAAGAGCTTCAGCAGGCA...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCTGTTCCCAAGCCTCTaGCTCTTGAAGGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVLFPSL*LLKALS
Trigger: GCTCAGAGCCTTCAAGAGCAAGAGGCTTGGGAACAG...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGCCCTGAGCTGTTTGTaGCTCCCGCATCAAGTAGAA +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFALSCL*LPHQVE
Trigger: TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGC...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTTGGCCCTGAGCTGTTaGTTGCTCCCGCATCAAGTA +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFLALSC*LLPHQV
Trigger: TACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTCAGTCCTTATCTAACTaGTCCCTTCCTGGCCCCAAC +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFQSLSN*SLPGPN
Trigger: GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTG...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CAA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCCAGAAGAGTGTTCCTaGGATCCAGCTCTGCTACCA +
Preference number: 5 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVPEECS*DPALLP
Trigger: TGGTAGCAGAGCTGGATCCAAGGAACACTCTTCTGG...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGCTGCAGTTGCTGCTGTaGGTGAGAGGAAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: ELFVAPASSRIPNSPSAELQLLL*VRGKGH
Trigger: GTGCCCCTTTCCTCTCACCAACAGCAGCAACTGCAG...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGGGAGAAGCCCTGCAGTaGCTGCTGTTGGTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEGEALQ*LLLVRG
Trigger: TCCTCTCACCAACAGCAGCAACTGCAGGGCTTCTCC...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCCAAGCCTCTTGCTCTaGAAGGCTCTGAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEPSLLL*KALSQC
Trigger: GCACTGGCTCAGAGCCTTCAAGAGCAAGAGGCTTGG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGCTGCAGTTGCTGCTGTaGGTGAGAGGAAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: FVAPASSRIPNSPSAEERLQLLL*VRGKGH
Trigger: GTGCCCCTTTCCTCTCACCAACAGCAGCAACTGCAG...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAGGAGAAGCCCTGCAGTaGCTGCTGTTGGTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEGEALQ*LLLVRG
Trigger: TCCTCTCACCAACAGCAGCAACTGCAGGGCTTCTCC...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCAGGTATTTCCCAAATaGGAGAAGCCCTGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVQVFPK*EKPCSC
Trigger: GCAACTGCAGGGCTTCTCCAATTTGGGAAATACCTG...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCCAAGCCTCTTGCTCTaGAAGGCTCTGAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGPSLLL*KALSQC
Trigger: GCACTGGCTCAGAGCCTTCAAGAGCAAGAGGCTTGG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACGCTGTGCTATTAATTTaGAGCAGGCATATTCTGGTG +
Preference number: 5 (lower is better)
Translates to: ACNGSTQSLSNLSLPGPNAVLLI*SRHILV
Trigger: CACCAGAATATGCCTGCTCAAAATTAATAGCACAGC...GTTGGGGCCAGGAAGGGACAAGTTAGATAAGGACTGAGTGCTTCCGTTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS CCA 90 bp AGGTCTTCCTGCTGCTGTTCGTTGCCTAACATTTCACAAAGTCTCTaGCTGAGGGCCACAGAACGTTTTAGCTCATCCTCACTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: RSSCCCSLPNISQSL*LRATERFSSSSLSE
Trigger: TTCAGACAGTGAGGATGAGCTAAAACGTTCTGTGGCCCTCAGCCAGAGACTTTGTGAAATGTTAGGCAACGAACAGCAGCAGGAAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
ENST00000473554.5
ENST00000484018.1
CDS-3UTR CAA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTGGCAAAGCACTCTTCTaGGGACACTACTCATATTCT +
Preference number: 5 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCGKALF*GHYSYS
Trigger: AGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGCC...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGGCAAAGCACTCTTCTaGGGACACTACTCATATTCT +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFGKALF*GHYSYS
Trigger: AGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGCC...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTGCTGCCCAATCTTATaGTTAAGCGAGAGAGCCACA +
Preference number: 5 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVCCPIL*LSERAT
Trigger: TGTGGCTCTCTCGCTTAACAATAAGATTGGGCAGCA...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGCAGGAATTCACCATTaGAGAGGCTTTCAATGGTCT +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFAGIHH*RGFQWS
Trigger: AGACCATTGAAAGCCTCTCAAATGGTGAATTCCTGC...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAACTGTTCCCAAGCCTCTaGCTCTTGAAGGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: LFVAPASSRIPNSPSAEELFPSL*LLKALS
Trigger: GCTCAGAGCCTTCAAGAGCAAGAGGCTTGGGAACAG...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTCAGCCTCTTGGATTTTaGATACCTCCAGGTCATTGT +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFQPLGF*IPPGHC
Trigger: ACAATGACCTGGAGGTATCAAAAATCCAAGAGGCTG...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAATGCCAACCCAGGAGTTaGTTCCTCACAAGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: FLSFGLALSCLLLPHQVECQPRS*FLTRPD
Trigger: GTCAGGCCTTGTGAGGAACAAACTCCTGGGTTGGCA...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTGCCCTGAGCTGTTTGTaGCTCCCGCATCAAGTAGAA +
Preference number: 5 (lower is better)
Translates to: PIFVFWFGPELFVAPASSALSCL*LPHQVE
Trigger: TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGC...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS TCA 90 bp CTTCCTGCTGCTGTTCGTTGCCTAACATTTCACAAAGTCTCTGGCTaGGGGCCACAGAACGTTTTAGCTCATCCTCACTGTCTGAATCAA +
Preference number: 5 (lower is better)
Translates to: LPAAVRCLTFHKVSG*GPQNVLAHPHCLNQ
Trigger: TTGATTCAGACAGTGAGGATGAGCTAAAACGTTCTGTGGCCCTCAGCCAGAGACTTTGTGAAATGTTAGGCAACGAACAGCAGCAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
ENST00000473554.5
ENST00000484018.1
CDS TCA 90 bp GCCACTCCGATCTCGATCACTCTGCACGGCAGCCTCTTGGATTTTTaGTACCTCCAGGTCATTGTAAGTAAACCACGCTTGCTTCTTAAT +
Preference number: 5 (lower is better)
Translates to: ATPISITLHGSLLDF*YLQVIVSKPRLLLN
Trigger: ATTAAGAAGCAAGCGTGGTTTACTTACAATGACCTGGAGGTATCAAAAATCCAAGAGGCTGCCGTGCAGAGTGATCGAGATCGGAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTGGATCTGTCATGGCCTaGTTGTTCGATGATGAATCA +
Preference number: 5 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVGSVMA*LFDDES
Trigger: TGATTCATCATCGAACAACAAGGCCATGACAGATCC...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCCAGAAGAGTGTTCCTaGGATCCAGCTCTGCTACCA +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGPEECS*DPALLP
Trigger: TGGTAGCAGAGCTGGATCCAAGGAACACTCTTCTGG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGGGAGAAGCCCTGCAGTaGCTGCTGTTGGTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLGEALQ*LLLVRG
Trigger: TCCTCTCACCAACAGCAGCAACTGCAGGGCTTCTCC...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGCAGGTATTTCCCAAATaGGAGAAGCCCTGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEQVFPK*EKPCSC
Trigger: GCAACTGCAGGGCTTCTCCAATTTGGGAAATACCTG...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTAGCGAGAGAGCCACATaGAAGCTATATCGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFSERAT*KLYRFK
Trigger: TTTGAAACGATATAGCTTCAATGTGGCTCTCTCGCT...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTTTTCCAATTCAGACTaGTCAGGCTCTATTGGGCAT +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFFSNSD*SGSIGH
Trigger: ATGCCCAATAGAGCCTGACAAGTCTGAATTGGAAAA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTAGCTCTGTGATTGTTTaGGGCTTCTCAGTTTCCATA +
Preference number: 5 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCSSVIV*GFSVSI
Trigger: TATGGAAACTGAGAAGCCCAAAACAATCACAGAGCT...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCTGCCAACCCAGGAGTTaGTTCCTCACAAGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSCQPRS*FLTRPD
Trigger: GTCAGGCCTTGTGAGGAACAAACTCCTGGGTTGGCA...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTTTTTGTCTTTTGGTTaGGCCCTGAGCTGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFFLSFG*ALSCLL
Trigger: CAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGCTGTGCTATTAATTTaGAGCAGGCATATTCTGGTG +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFAVLLI*SRHILV
Trigger: CACCAGAATATGCCTGCTCAAAATTAATAGCACAGC...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAATGTTGCCGCTCTACTTaGCCTCAACTCAGAGCACCT +
Preference number: 5 (lower is better)
Translates to: LFVAPASSRIPNSPSAEECCRST*PQLRAP
Trigger: AGGTGCTCTGAGTTGAGGCAAAGTAGAGCGGCAACA...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTTGTTGCCGCTCTACTTaGCCTCAACTCAGAGCACCT +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGCCRST*PQLRAP
Trigger: AGGTGCTCTGAGTTGAGGCAAAGTAGAGCGGCAACA...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTCTGTCATGGCCTTGTaGTTCGATGATGAATCATTT +
Preference number: 5 (lower is better)
Translates to: EVGSSNKYAVHAANPGVCSVMAL*FDDESF
Trigger: AAATGATTCATCATCGAACAACAAGGCCATGACAGA...ACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCAGGTATTTCCCAAATaGGAGAAGCCCTGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGQVFPK*EKPCSC
Trigger: GCAACTGCAGGGCTTCTCCAATTTGGGAAATACCTG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGGGAAGCCTGTTAAATTaGTGCCTGACAAGAGCACAC +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEGSLLN*CLTRAH
Trigger: GTGTGCTCTTGTCAGGCACAAATTTAACAGGCTTCC...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTCTTGGAATGATGACTaGCTGCCCAATCTTATTGTT +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFSWNDD*LPNLIV
Trigger: AACAATAAGATTGGGCAGCAAGTCATCATTCCAAGA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTAAAGCCAAGGAGCTCTaGGATTTGAAGGTGAATTTC +
Preference number: 5 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVKAKEL*DLKVNF
Trigger: GAAATTCACCTTCAAATCCAAGAGCTCCTTGGCTTT...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTGTTTTTTCCAATTCAGACTaGTCAGGCTCTATTGGGCAT +
Preference number: 5 (lower is better)
Translates to: RWAAVTNMQCMLPTQEFVFSNSD*SGSIGH
Trigger: ATGCCCAATAGAGCCTGACAAGTCTGAATTGGAAAA...AACAAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGTGCCTGCTGAAGCTCTaGCTCTTCCCTTTCACGCTC +
Preference number: 5 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLCLLKL*LFPFTL
Trigger: GAGCGTGAAAGGGAAGAGCAAGAGCTTCAGCAGGCA...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGACCAAGCCTCTTGCTCTaGAAGGCTCTGAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRPSLLL*KALSQC
Trigger: GCACTGGCTCAGAGCCTTCAAGAGCAAGAGGCTTGG...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGGCAAAGCACTCTTCTaGGGACACTACTCATATTCT +
Preference number: 5 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEGKALF*GHYSYS
Trigger: AGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGCC...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GTGAGGTGGGCAGCAGTAACAAATATGCAGTGCATGCTGCCAACCCAGGAGTTTTTAGCTGAAATATCCTaGGAATTCCTCCAGTATTGT +
Preference number: 5 (lower is better)
Translates to: VRWAAVTNMQCMLPTQEFLAEIS*EFLQYC
Trigger: ACAATACTGGAGGAATTCCAAGGATATTTCAGCTAA...AAACTCCTGGGTTGGCAGCATGCACTGCATATTTGTTACTGCTGCCCACCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CAAATAATGTGGCCACAGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAACCAAACTTCCTCTTTTaGCAGAAGCCTGATTGTCTG +
Preference number: 5 (lower is better)
Translates to: QIMWPQLPENLVVAQLGKPNFLF*QKPDCL
Trigger: CAGACAATCAGGCTTCTGCAAAAAGAGGAAGTTTGG...TTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTGTGGCCACATTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CAA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTCCAAACTTCCTCTTTTaGCAGAAGCCTGATTGTCTG +
Preference number: 5 (lower is better)
Translates to: PIFVFWFGPELFVAPASSPNFLF*QKPDCL
Trigger: CAGACAATCAGGCTTCTGCAAAAAGAGGAAGTTTGG...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCCAAACTTCCTCTTTTaGCAGAAGCCTGATTGTCTG +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEPNFLF*QKPDCL
Trigger: CAGACAATCAGGCTTCTGCAAAAAGAGGAAGTTTGG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGGGATCTGTCATGGCCTaGTTGTTCGATGATGAATCA +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGEGSVMA*LFDDES
Trigger: TGATTCATCATCGAACAACAAGGCCATGACAGATCC...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAATCCCAAACTTCTTTaGGCAGAGGGAGTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: LFVAPASSRIPNSPSAEENPKLL*AEGVWL
Trigger: AAGCCAGACTCCCTCTGCCAAAAGAAGTTTGGGATT...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAAATCCCAAACTTCTTTaGGCAGAGGGAGTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: FLSFGLALSCLLLPHQVENPKLL*AEGVWL
Trigger: AAGCCAGACTCCCTCTGCCAAAAGAAGTTTGGGATT...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGCAAGAGAATCTTGAATaGAACGAGGAGGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEQENLE*NEEGVV
Trigger: AACCACTCCCTCCTCGTTCAATTCAAGATTCTCTTG...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGGAAGCCTGTTAAATTaGTGCCTGACAAGAGCACAC +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGGSLLN*CLTRAH
Trigger: GTGTGCTCTTGTCAGGCACAAATTTAACAGGCTTCC...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGCTGCCCAATCTTATaGTTAAGCGAGAGAGCCACA +
Preference number: 5 (lower is better)
Translates to: FVAPASSRIPNSPSAEERCCPIL*LSERAT
Trigger: TGTGGCTCTCTCGCTTAACAATAAGATTGGGCAGCA...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTCCTGCTGCTGTTCGTaGCCTAACATTTCACAAAGT +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGESCCCS*PNISQS
Trigger: ACTTTGTGAAATGTTAGGCAACGAACAGCAGCAGGA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGATGCCTGCTGAAGCTCTaGCTCTTCCCTTTCACGCTC +
Preference number: 5 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGCLLKL*LFPFTL
Trigger: GAGCGTGAAAGGGAAGAGCAAGAGCTTCAGCAGGCA...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGACTGTTCCCAAGCCTCTaGCTCTTGAAGGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRLFPSL*LLKALS
Trigger: GCTCAGAGCCTTCAAGAGCAAGAGGCTTGGGAACAG...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTCAGCCTCTTGGATTTTaGATACCTCCAGGTCATTGT +
Preference number: 5 (lower is better)
Translates to: PIFVFWFGPELFVAPASSQPLGF*IPPGHC
Trigger: ACAATGACCTGGAGGTATCAAAAATCCAAGAGGCTG...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CAAATAATGTGGCCACAGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAAAACCTGATGTGGTTTaGTCCCTACCTCTGAGAACT +
Preference number: 5 (lower is better)
Translates to: QIMWPQLPENLVVAQLGKKPDVV*SLPLRT
Trigger: AGTTCTCAGAGGTAGGGACAAAACCACATCAGGTTT...TTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTGTGGCCACATTATTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS TCA 90 bp CCTAGTTGGAGGTCTCTGGTTACTGTATGGCAAATAACTTTATTCTaGTCCTTGTGCCAAAGGCAAAGCACTCTTCTTGGGACACTACTC +
Preference number: 5 (lower is better)
Translates to: PSWRSLVTVWQITLF*SLCQRQSTLLGTLL
Trigger: GAGTAGTGTCCCAAGAAGAGTGCTTTGCCTTTGGCACAAGGATCAGAATAAAGTTATTTGCCATACAGTAACCAGAGACCTCCAACTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418019.5
CDS-3UTR CAA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGGGATCTGTCATGGCCTaGTTGTTCGATGATGAATCA +
Preference number: 5 (lower is better)
Translates to: FVAPASSRIPNSPSAEERGSVMA*LFDDES
Trigger: TGATTCATCATCGAACAACAAGGCCATGACAGATCC...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAGGATCTGTCATGGCCTaGTTGTTCGATGATGAATCA +
Preference number: 5 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEGSVMA*LFDDES
Trigger: TGATTCATCATCGAACAACAAGGCCATGACAGATCC...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGACCAGAAGAGTGTTCCTaGGATCCAGCTCTGCTACCA +
Preference number: 5 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGPEECS*DPALLP
Trigger: TGGTAGCAGAGCTGGATCCAAGGAACACTCTTCTGG...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAAATCCCAAACTTCTTTaGGCAGAGGGAGTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKNPKLL*AEGVWL
Trigger: AAGCCAGACTCCCTCTGCCAAAAGAAGTTTGGGATT...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGCTTCCATGGGATACCTaGTTTAAGCAAGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGELPWDT*FKQVIC
Trigger: GCAAATGACTTGCTTAAACAAGGTATCCCATGGAAG...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAACAAGAGAATCTTGAATaGAACGAGGAGGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEQENLE*NEEGVV
Trigger: AACCACTCCCTCCTCGTTCAATTCAAGATTCTCTTG...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGAGCGAGAGAGCCACATaGAAGCTATATCGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGESERAT*KLYRFK
Trigger: TTTGAAACGATATAGCTTCAATGTGGCTCTCTCGCT...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAATGCTGCCCAATCTTATaGTTAAGCGAGAGAGCCACA +
Preference number: 5 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKCCPIL*LSERAT
Trigger: TGTGGCTCTCTCGCTTAACAATAAGATTGGGCAGCA...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGCAGGAATTCACCATTaGAGAGGCTTTCAATGGTCT +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGAGIHH*RGFQWS
Trigger: AGACCATTGAAAGCCTCTCAAATGGTGAATTCCTGC...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTTCCTGCTGCTGTTCGTaGCCTAACATTTCACAAAGT +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGSCCCS*PNISQS
Trigger: ACTTTGTGAAATGTTAGGCAACGAACAGCAGCAGGA...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGTTTTCCAATTCAGACTaGTCAGGCTCTATTGGGCAT +
Preference number: 5 (lower is better)
Translates to: ELFVAPASSRIPNSPSAEFSNSD*SGSIGH
Trigger: ATGCCCAATAGAGCCTGACAAGTCTGAATTGGAAAA...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTGCCTGCTGAAGCTCTaGCTCTTCCCTTTCACGCTC +
Preference number: 5 (lower is better)
Translates to: LNFILAIGLLASVVQNFSCLLKL*LFPFTL
Trigger: GAGCGTGAAAGGGAAGAGCAAGAGCTTCAGCAGGCA...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAACAGCCTCTTGGATTTTaGATACCTCCAGGTCATTGT +
Preference number: 5 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEQPLGF*IPPGHC
Trigger: ACAATGACCTGGAGGTATCAAAAATCCAAGAGGCTG...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTCCAACAATCCATTTCTaGGGACTGCATGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGPTIHF*GLHVNS
Trigger: GCTGTTTACATGCAGTCCCAAGAAATGGATTGTTGG...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTGCTGGGGAGTCCCAATaGGAGAAATATTATCTTTCT +
Preference number: 5 (lower is better)
Translates to: PIFVFWFGPELFVAPASSAGESQ*EKYYLS
Trigger: AGAAAGATAATATTTCTCCAATTGGGACTCCCCAGC...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GGTTTTATGTTCCTGTGTCAGTTTGCTGAGAATGATGGTTTTCAGCTTCATCCAACATGCCATCATGGTTaGCTGCACCCATCAACCCAT +
Preference number: 5 (lower is better)
Translates to: GFMFLCQFAENDGFQLHPTCHHG*LHPSTH
Trigger: ATGGGTTGATGGGTGCAGCAAACCATGATGGCATGT...TGGATGAAGCTGAAAACCATCATTCTCAGCAAACTGACACAGGAACATAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGTCCTTACTTGGTACTTaGTCAATAGACAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ELFVAPASSRIPNSPSAESLLGT*SIDKKL
Trigger: CAGCTTCTTGTCTATTGACAAAGTACCAAGTAAGGA...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTCCTTACTTGGTACTTaGTCAATAGACAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGESLLGT*SIDKKL
Trigger: CAGCTTCTTGTCTATTGACAAAGTACCAAGTAAGGA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TGTGTCAGTTTGCTGAGAATGATGGTTTTCAGCTTCATCCATGTCTCTGCAAAGCCAAACTTCCTCTTTTaGCAGAAGCCTGATTGTCTG +
Preference number: 5 (lower is better)
Translates to: CVSLLRMMVFSFIHVSAKPNFLF*QKPDCL
Trigger: CAGACAATCAGGCTTCTGCAAAAAGAGGAAGTTTGG...CTTTGCAGAGACATGGATGAAGCTGAAAACCATCATTCTCAGCAAACTGACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCCCAAACTTCCTCTTTTaGCAGAAGCCTGATTGTCTG +
Preference number: 5 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSPNFLF*QKPDCL
Trigger: CAGACAATCAGGCTTCTGCAAAAAGAGGAAGTTTGG...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CAAATAATGTGGCCACAGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAATCTGTCATGGCCTTGTaGTTCGATGATGAATCATTT +
Preference number: 5 (lower is better)
Translates to: QIMWPQLPENLVVAQLGKSVMAL*FDDESF
Trigger: AAATGATTCATCATCGAACAACAAGGCCATGACAGA...TTTGCCTAATTGAGCCACTACCAGGTTTTCTGGCAGCTGTGGCCACATTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTCTGTCATGGCCTTGTaGTTCGATGATGAATCATTT +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGESVMAL*FDDESF
Trigger: AAATGATTCATCATCGAACAACAAGGCCATGACAGA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGTCTGTCATGGCCTTGTaGTTCGATGATGAATCATTT +
Preference number: 5 (lower is better)
Translates to: ELFVAPASSRIPNSPSAESVMAL*FDDESF
Trigger: AAATGATTCATCATCGAACAACAAGGCCATGACAGA...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCCCAGAAGAGTGTTCCTaGGATCCAGCTCTGCTACCA +
Preference number: 5 (lower is better)
Translates to: LNFILAIGLLASVVQNFSPEECS*DPALLP
Trigger: TGGTAGCAGAGCTGGATCCAAGGAACACTCTTCTGG...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGAATCCCAAACTTCTTTaGGCAGAGGGAGTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLNPKLL*AEGVWL
Trigger: AAGCCAGACTCCCTCTGCCAAAAGAAGTTTGGGATT...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAACTTCCATGGGATACCTaGTTTAAGCAAGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: FLSFGLALSCLLLPHQVELPWDT*FKQVIC
Trigger: GCAAATGACTTGCTTAAACAAGGTATCCCATGGAAG...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTCTTGGAATGATGACTaGCTGCCCAATCTTATTGTT +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGESWNDD*LPNLIV
Trigger: AACAATAAGATTGGGCAGCAAGTCATCATTCCAAGA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGAAAGCCAAGGAGCTCTaGGATTTGAAGGTGAATTTC +
Preference number: 5 (lower is better)
Translates to: FVAPASSRIPNSPSAEERKAKEL*DLKVNF
Trigger: GAAATTCACCTTCAAATCCAAGAGCTCCTTGGCTTT...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCTCCTGCTGCTGTTCGTaGCCTAACATTTCACAAAGT +
Preference number: 5 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSSCCCS*PNISQS
Trigger: ACTTTGTGAAATGTTAGGCAACGAACAGCAGCAGGA...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTTTTCCAATTCAGACTaGTCAGGCTCTATTGGGCAT +
Preference number: 5 (lower is better)
Translates to: FVAPASSRIPNSPSAEERFSNSD*SGSIGH
Trigger: ATGCCCAATAGAGCCTGACAAGTCTGAATTGGAAAA...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGAGCTCTGTGATTGTTTaGGGCTTCTCAGTTTCCATA +
Preference number: 5 (lower is better)
Translates to: FVAPASSRIPNSPSAEERSSVIV*GFSVSI
Trigger: TATGGAAACTGAGAAGCCCAAAACAATCACAGAGCT...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTAGCTCTGTGATTGTTTaGGGCTTCTCAGTTTCCATA +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGSSVIV*GFSVSI
Trigger: TATGGAAACTGAGAAGCCCAAAACAATCACAGAGCT...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCGCCCTGAGCTGTTTGTaGCTCCCGCATCAAGTAGAA +
Preference number: 5 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAALSCL*LPHQVE
Trigger: TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGC...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGCTGTGCTATTAATTTaGAGCAGGCATATTCTGGTG +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGAVLLI*SRHILV
Trigger: CACCAGAATATGCCTGCTCAAAATTAATAGCACAGC...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCTTATCCTCCCTATGTTaGAGAGACAGAGATGCTAGC +
Preference number: 5 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSLSSLC*RDRDAS
Trigger: GCTAGCATCTCTGTCTCTCAAACATAGGGAGGATAA...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAATTATCCTCCCTATGTTaGAGAGACAGAGATGCTAGC +
Preference number: 5 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKLSSLC*RDRDAS
Trigger: GCTAGCATCTCTGTCTCTCAAACATAGGGAGGATAA...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCTGTTGCCGCTCTACTTaGCCTCAACTCAGAGCACCT +
Preference number: 5 (lower is better)
Translates to: FNCNPILRAKPDSKWLNACCRST*PQLRAP
Trigger: AGGTGCTCTGAGTTGAGGCAAAGTAGAGCGGCAACA...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCAAACCTGATGTGGTTTaGTCCCTACCTCTGAGAACT +
Preference number: 5 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSKPDVV*SLPLRT
Trigger: AGTTCTCAGAGGTAGGGACAAAACCACATCAGGTTT...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR CAA 90 bp GAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGTTAGCTGAAATATCCTaGGAATTCCTCCAGTATTGT +
Preference number: 5 (lower is better)
Translates to: ELFVAPASSRIPNSPSAELAEIS*EFLQYC
Trigger: ACAATACTGGAGGAATTCCAAGGATATTTCAGCTAA...CTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTTAGCTGAAATATCCTaGGAATTCCTCCAGTATTGT +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGELAEIS*EFLQYC
Trigger: ACAATACTGGAGGAATTCCAAGGATATTTCAGCTAA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TATACACATGCCATCATGGTTTGCTGCACCCATCAACCCATCATCTACATTAGGTCCTTACTTGGTACTTaGTCAATAGACAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: YTHAIMVCCTHQPIIYIRSLLGT*SIDKKL
Trigger: CAGCTTCTTGTCTATTGACAAAGTACCAAGTAAGGA...CCTAATGTAGATGATGGGTTGATGGGTGCAGCAAACCATGATGGCATGTGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTTCCTTACTTGGTACTTaGTCAATAGACAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGSLLGT*SIDKKL
Trigger: CAGCTTCTTGTCTATTGACAAAGTACCAAGTAAGGA...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAATCCTTACTTGGTACTTaGTCAATAGACAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: FLSFGLALSCLLLPHQVESLLGT*SIDKKL
Trigger: CAGCTTCTTGTCTATTGACAAAGTACCAAGTAAGGA...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTACCAGAAGAGTGTTCCTaGGATCCAGCTCTGCTACCA +
Preference number: 5 (lower is better)
Translates to: FSLSCLSLMGICHYPHFLPEECS*DPALLP
Trigger: TGGTAGCAGAGCTGGATCCAAGGAACACTCTTCTGG...TAAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAGGTATTTCCCAAATaGGAGAAGCCCTGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAQVFPK*EKPCSC
Trigger: GCAACTGCAGGGCTTCTCCAATTTGGGAAATACCTG...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGAGTTAAACTGTTCTCTTTaGGGGATAATCTCTCCACAT +
Preference number: 5 (lower is better)
Translates to: LLPHQVEFQILLQQRKGELNCSL*GIISPH
Trigger: ATGTGGAGAGATTATCCCCAAAAGAGAACAGTTTAA...CTCACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGCAAGAGAATCTTGAATaGAACGAGGAGGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLQENLE*NEEGVV
Trigger: AACCACTCCCTCCTCGTTCAATTCAAGATTCTCTTG...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAAGCGAGAGAGCCACATaGAAGCTATATCGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKSERAT*KLYRFK
Trigger: TTTGAAACGATATAGCTTCAATGTGGCTCTCTCGCT...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CCAATTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAAGGAGCTCTTGGATTaGAAGGTGAATTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: PIFVFWFGPELFVAPASSKELLD*KVNFFE
Trigger: TTCAAAGAAATTCACCTTCAAATCCAAGAGCTCCTT...ACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR CAA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAATTTTTGTCTTTTGGTTaGGCCCTGAGCTGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKFLSFG*ALSCLL
Trigger: CAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGCTGGGGAGTCCCAATaGGAGAAATATTATCTTTCT +
Preference number: 5 (lower is better)
Translates to: CLLLPHQVEFQILLQQRKAGESQ*EKYYLS
Trigger: AGAAAGATAATATTTCTCCAATTGGGACTCCCCAGC...TTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAGGCAAAGCACTCTTCTaGGGACACTACTCATATTCT +
Preference number: 5 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRGKALF*GHYSYS
Trigger: AGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGCC...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAATTAAACTGTTCTCTTTaGGGGATAATCTCTCCACAT +
Preference number: 5 (lower is better)
Translates to: FLSFGLALSCLLLPHQVELNCSL*GIISPH
Trigger: ATGTGGAGAGATTATCCCCAAAAGAGAACAGTTTAA...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTTAAACTGTTCTCTTTaGGGGATAATCTCTCCACAT +
Preference number: 5 (lower is better)
Translates to: FVAPASSRIPNSPSAEERLNCSL*GIISPH
Trigger: ATGTGGAGAGATTATCCCCAAAAGAGAACAGTTTAA...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CCTCAGACATATAGCACACATGGAGACAACTTACTAATTGTGTGTAAGTATGATGGAAGCCTGTTAAATTaGTGCCTGACAAGAGCACAC +
Preference number: 5 (lower is better)
Translates to: PQTYSTHGDNLLIVCKYDGSLLN*CLTRAH
Trigger: GTGTGCTCTTGTCAGGCACAAATTTAACAGGCTTCC...ATCATACTTACACACAATTAGTAAGTTGTCTCCATGTGTGCTATATGTCTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CAA 90 bp AACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCCAAGGTTTGAGCGAGAGAGCCACATaGAAGCTATATCGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: NPILRAKPDSKWLNAQGLSERAT*KLYRFK
Trigger: TTTGAAACGATATAGCTTCAATGTGGCTCTCTCGCT...CAAACCTTGGGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCTGCTGCCCAATCTTATaGTTAAGCGAGAGAGCCACA +
Preference number: 5 (lower is better)
Translates to: FNCNPILRAKPDSKWLNACCPIL*LSERAT
Trigger: TGTGGCTCTCTCGCTTAACAATAAGATTGGGCAGCA...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CTGTTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAAGGAGCTCTTGGATTaGAAGGTGAATTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: LFVAPASSRIPNSPSAEEKELLD*KVNFFE
Trigger: TTCAAAGAAATTCACCTTCAAATCCAAGAGCTCCTT...TTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAAAGGAGCTCTTGGATTaGAAGGTGAATTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEKELLD*KVNFFE
Trigger: TTCAAAGAAATTCACCTTCAAATCCAAGAGCTCCTT...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR CAA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGATCCTGCTGCTGTTCGTaGCCTAACATTTCACAAAGT +
Preference number: 5 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRSCCCS*PNISQS
Trigger: ACTTTGTGAAATGTTAGGCAACGAACAGCAGCAGGA...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGTGTAAGTAAACCACGCTaGCTTCTTAATGTCATATAC +
Preference number: 5 (lower is better)
Translates to: LLLPHQVEFQILLQQRKGVSKPR*LLNVIY
Trigger: GTATATGACATTAAGAAGCAAGCGTGGTTTACTTAC...ACCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTTTGTCTTTTGGTTTGGCCCTGAGCTGTTTGTTGCTCCCGCATCAAGTAGAAGTAAGTAAACCACGCTaGCTTCTTAATGTCATATAC +
Preference number: 5 (lower is better)
Translates to: FLSFGLALSCLLLPHQVEVSKPR*LLNVIY
Trigger: GTATATGACATTAAGAAGCAAGCGTGGTTTACTTAC...TTCTACTTGATGCGGGAGCAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGACCAACAATCCATTTCTaGGGACTGCATGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGPTIHF*GLHVNS
Trigger: GCTGTTTACATGCAGTCCCAAGAAATGGATTGTTGG...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTGTTGCTCCCGCATCAAGTAGAATTCCAAATTCTCCTTCAGCAGAGGAAAGGAGTTTTTGTATACACTaGCAAGAGTGCATTACTCAG +
Preference number: 5 (lower is better)
Translates to: FVAPASSRIPNSPSAEERSFCIH*QECITQ
Trigger: CTGAGTAATGCACTCTTGCAAGTGTATACAAAAACT...CCTTTCCTCTGCTGAAGGAGAATTTGGAATTCTACTTGATGCGGGAGCAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CAA 90 bp TGTGTCAGTTTGCTGAGAATGATGGTTTTCAGCTTCATCCATGTCTCTGCAAAGTTAGCTGAAATATCCTaGGAATTCCTCCAGTATTGT +
Preference number: 5 (lower is better)
Translates to: CVSLLRMMVFSFIHVSAKLAEIS*EFLQYC
Trigger: ACAATACTGGAGGAATTCCAAGGATATTTCAGCTAA...CTTTGCAGAGACATGGATGAAGCTGAAAACCATCATTCTCAGCAAACTGACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGACTTCCATGGGATACCTaGTTTAAGCAAGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRLPWDT*FKQVIC
Trigger: GCAAATGACTTGCTTAAACAAGGTATCCCATGGAAG...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCGCAGGAATTCACCATTaGAGAGGCTTTCAATGGTCT +
Preference number: 5 (lower is better)
Translates to: LNFILAIGLLASVVQNFSAGIHH*RGFQWS
Trigger: AGACCATTGAAAGCCTCTCAAATGGTGAATTCCTGC...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258399.8
ENST00000454775.5
CDS-3UTR CAA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGAAAAGCCAAGGAGCTCTaGGATTTGAAGGTGAATTTC +
Preference number: 5 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGKAKEL*DLKVNF
Trigger: GAAATTCACCTTCAAATCCAAGAGCTCCTTGGCTTT...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp GCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAGAACACTCTTCTTATCCTCCGTAAGTAAACCACGCTaGCTTCTTAATGTCATATAC +
Preference number: 5 (lower is better)
Translates to: ASVVQNFSFTRRTLFLSSVSKPR*LLNVIY
Trigger: GTATATGACATTAAGAAGCAAGCGTGGTTTACTTAC...GGAGGATAAGAAGAGTGTTCTTCTGGTAAAGCTAAAATTCTGGACCACTGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAGCTGGGGAGTCCCAATaGGAGAAATATTATCTTTCT +
Preference number: 5 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRAGESQ*EKYYLS
Trigger: AGAAAGATAATATTTCTCCAATTGGGACTCCCCAGC...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCAAAATCCATATGTACTaGGAGATCCAGCTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAKIHMY*EIQLLP
Trigger: GGGCAACAGCTGGATCTCCAAGTACATATGGATTTT...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CAA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCGTTGACTGTTCTTCTTaGTTCTGGCATCTGACTGGA +
Preference number: 5 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAVDCSS*FWHLTG
Trigger: TCCAGTCAGATGCCAGAACAAAGAAGAACAGTCAAC...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CAA 90 bp CATTTGCCATTACCCTCACTTTTTACATTTAAAACCATCAACCCTTCTGTGCTGTGTTCCTGTGTCAGTTaGCTGAGAATGATGGTTTTC +
Preference number: 5 (lower is better)
Translates to: HLPLPSLFTFKTINPSVLCSCVS*LRMMVF
Trigger: GAAAACCATCATTCTCAGCAAACTGACACAGGAACA...CAGCACAGAAGGGTTGATGGTTTTAAATGTAAAAAGTGAGGGTAATGGCAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp TGTGTCAGTTTGCTGAGAATGATGGTTTTCAGCTTCATCCATGTCTCTGCAAAGGTACAATGTGCAGGTTaGTTACATAGGTATACACAT +
Preference number: 5 (lower is better)
Translates to: CVSLLRMMVFSFIHVSAKVQCAG*LHRYTH
Trigger: ATGTGTATACCTATGTAACAAACCTGCACATTGTAC...CTTTGCAGAGACATGGATGAAGCTGAAAACCATCATTCTCAGCAAACTGACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp ATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTACCAGAAAGGAGCTCTTGGATTaGAAGGTGAATTTCATTGCC +
Preference number: 5 (lower is better)
Translates to: ILAIGLLASVVQNFSFTRKELLD*KVNFIA
Trigger: GGCAATGAAATTCACCTTCAAATCCAAGAGCTCCTT...TCTGGTAAAGCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415516.5
CDS-3UTR CAA 90 bp CTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTACATTTAAAACCATCAGGCAAAGCACTCTTCTaGGGACACTACTCATATTCT +
Preference number: 5 (lower is better)
Translates to: LSLMGICHYPHFLHLKPSGKALF*GHYSYS
Trigger: AGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGCC...TGATGGTTTTAAATGTAAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp TTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTACATTTAGGATCTGTCATGGCCTaGTTGTTCGATGATGAATCA +
Preference number: 5 (lower is better)
Translates to: LSCLSLMGICHYPHFLHLGSVMA*LFDDES
Trigger: TGATTCATCATCGAACAACAAGGCCATGACAGATCC...TAAATGTAAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCAAAGCCAAGGAGCTCTaGGATTTGAAGGTGAATTTC +
Preference number: 5 (lower is better)
Translates to: FNCNPILRAKPDSKWLNAKAKEL*DLKVNF
Trigger: GAAATTCACCTTCAAATCCAAGAGCTCCTTGGCTTT...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CTTAATTTCATACTTGCAATAGGGCTTTTAGCTTCAGTGGTCCAGAATTTTAGCTTTTTGTCTTTTGGTTaGGCCCTGAGCTGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: LNFILAIGLLASVVQNFSFLSFG*ALSCLL
Trigger: CAACAAACAGCTCAGGGCCAAACCAAAAGACAAAAA...GCTAAAATTCTGGACCACTGAAGCTAAAAGCCCTATTGCAAGTATGAAATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS TCA 90 bp CACTTTTTACATTTAAAACCATCAACCCTTCTGTGCTGCACTGCATaGTCACATGTTCTCAACAAGTGCTTAGCAGGTATCTTATGTATT +
Preference number: 5 (lower is better)
Translates to: HFLHLKPSTLLCCTA*SHVLNKCLAGILCI
Trigger: AATACATAAGATACCTGCTAAGCACTTGTTGAGAACATGTGATCATGCAGTGCAGCACAGAAGGGTTGATGGTTTTAAATGTAAAAAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp TCCATCCATTTTATTGGAACACTTTTATGTGACTTGAATCTGGTGTTAGGTTGTCTTCCATGGGATACCTaGTTTAAGCAAGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: SIHFIGTLLCDLNLVLGCLPWDT*FKQVIC
Trigger: GCAAATGACTTGCTTAAACAAGGTATCCCATGGAAG...ACAACCTAACACCAGATTCAAGTCACATAAAAGTGTTCCAATAAAATGGATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CAA 90 bp ATCAAATGTGGGACTGTAACATATTCCAAAGCACCAACAATCCATTTCTTGGGATTAAACTGTTCTCTTTaGGGGATAATCTCTCCACAT +
Preference number: 5 (lower is better)
Translates to: IKCGTVTYSKAPTIHFLGLNCSL*GIISPH
Trigger: ATGTGGAGAGATTATCCCCAAAAGAGAACAGTTTAA...TCCCAAGAAATGGATTGTTGGTGCTTTGGAATATGTTACAGTCCCACATTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp CCTCAGACATATAGCACACATGGAGACAACTTACTAATTGTGTGTAAGTATGATTCTTGGAATGATGACTaGCTGCCCAATCTTATTGTT +
Preference number: 5 (lower is better)
Translates to: PQTYSTHGDNLLIVCKYDSWNDD*LPNLIV
Trigger: AACAATAAGATTGGGCAGCAAGTCATCATTCCAAGA...ATCATACTTACACACAATTAGTAAGTTGTCTCCATGTGTGCTATATGTCTGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS-3UTR CAA 90 bp TTTAATTGCAACCCTATTTTAAGGGCAAAGCCAGACAGTAAATGGTTAAATGCCTCTTGGAATGATGACTaGCTGCCCAATCTTATTGTT +
Preference number: 5 (lower is better)
Translates to: FNCNPILRAKPDSKWLNASWNDD*LPNLIV
Trigger: AACAATAAGATTGGGCAGCAAGTCATCATTCCAAGA...GGCATTTAACCATTTACTGTCTGGCTTTGCCCTTAAAATAGGGTTGCAATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000454775.5
CDS-3UTR CAA 90 bp ACATTTTCTTTATCCTGTCTATCATTGATGGGCATTTGCCATTACCCTCACTTTATCATTGATGGGCATTaGCCATTACCCTCACTTTTT +
Preference number: 5 (lower is better)
Translates to: TFSLSCLSLMGICHYPHFIIDGH*PLPSLF
Trigger: AAAAAGTGAGGGTAATGGCAAATGCCCATCAATGAT...AAAGTGAGGGTAATGGCAAATGCCCATCAATGATAGACAGGATAAAGAAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp CATTTGCCATTACCCTCACTTTTTACATTTAAAACCATCAACCCTTCTGTGCTGAAGAATATGTGGTGTTaGGTTTTATGTTCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: HLPLPSLFTFKTINPSVLKNMWC*VLCSCV
Trigger: GACACAGGAACATAAAACCAAACACCACATATTCTT...CAGCACAGAAGGGTTGATGGTTTTAAATGTAAAAAGTGAGGGTAATGGCAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp CTATCATTGATGGGCATTTGCCATTACCCTCACTTTTTACATTTAAAACCATCATCTGTCATGGCCTTGTaGTTCGATGATGAATCATTT +
Preference number: 5 (lower is better)
Translates to: LSLMGICHYPHFLHLKPSSVMAL*FDDESF
Trigger: AAATGATTCATCATCGAACAACAAGGCCATGACAGA...TGATGGTTTTAAATGTAAAAAGTGAGGGTAATGGCAAATGCCCATCAATGATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338465.5
CDS-3UTR CAA 90 bp CCTCAGACATATAGCACACATGGAGACAACTTACTAATTGTGTGTAAGTATGATGTAAGTAAACCACGCTaGCTTCTTAATGTCATATAC +
Preference number: 5 (lower is better)
Translates to: PQTYSTHGDNLLIVCKYDVSKPR*LLNVIY
Trigger: GTATATGACATTAAGAAGCAAGCGTGGTTTACTTAC...ATCATACTTACACACAATTAGTAAGTTGTCTCCATGTGTGCTATATGTCTGAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258399.8
CDS CCA 72 bp GGACAGACCCGCGGAAAGCACGGAGCCCGCGAGGAGTaGGAGGAGCCGAGGGTAATGGAAGTAGGGATACCG +
Preference number: 6 (lower is better)
Translates to: GQTRGKHGAREE*EEPRVMEVGIP
Trigger: CGGTATCCCTACTTCCATTACCCTCGGCTCCTCCCACTCCTCGCGGGCTCCGTGCTTTCCGCGGGTCTGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000338465.5
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS TCA 72 bp CCCAAATTGGAGAAGCCCTGCAGTTGCTGCTGTTGGTaGGAGGAAAGGGGCACTCTTGGTTTATTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: PKLEKPCSCCCW*EERGTLGLFQP
Trigger: TGGCTGGAATAAACCAAGAGTGCCCCTTTCCTCTCACCAACAGCAGCAACTGCAGGGCTTCTCCAATTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
ENST00000486242.1
CDS GCA 72 bp CACTCTTCTTGGGACACTACTCATATTCTGCAGCTATaGCAGTTCTCCGGAAGCCATCAACTCAGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: HSSWDTTHILQL*QFSGSHQLSCA
Trigger: GGCGCAGCTGAGTTGATGGCTTCCGGAGAACTGGCATAGCTGCAGAATATGAGTAGTGTCCCAAGAAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000338465.5
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS CCA 72 bp CCTTTACCTGGCAGGTTCTACAGGCAGGATACAGTTTaGGGGCCCCTAGTTGGAGGTCTCTGGTTACTGTAT +
Preference number: 6 (lower is better)
Translates to: PLPGRFYRQDTV*GPLVGGLWLLY
Trigger: ATACAGTAACCAGAGACCTCCAACTAGGGGCCCCCAAACTGTATCCTGCCTGTAGAACCTGCCAGGTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454775.5
CDS CAA 72 bp ACCTTTACCTGGCAGGTTCTACAGGCAGGATACAGTTaGGGGGCCCCTAGTTGGAGGTCTCTGGTTACTGTA +
Preference number: 6 (lower is better)
Translates to: TFTWQVLQAGYS*GAPSWRSLVTV
Trigger: TACAGTAACCAGAGACCTCCAACTAGGGGCCCCCAAACTGTATCCTGCCTGTAGAACCTGCCAGGTAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454775.5
CDS CAA 90 bp AGAAGCCCTGCAGTTGCTGCTGTTGGTGAGAGGAAAGGGGCACTCTaGGTTTATTCCAGCCAGTGTAATCCTGGTTACACCTCAGTTTTT +
Preference number: 6 (lower is better)
Translates to: RSPAVAAVGERKGAL*VYSSQCNPGYTSVF
Trigger: AAAAACTGAGGTGTAACCAGGATTACACTGGCTGGAATAAACCAAGAGTGCCCCTTTCCTCTCACCAACAGCAGCAACTGCAGGGCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
ENST00000486242.1
CDS TCA 72 bp GCTGTTCGTTGCCTAACATTTCACAAAGTCTCTGGCTaGGGGCCACAGAACGTTTTAGCTCATCCTCACTGT +
Preference number: 6 (lower is better)
Translates to: AVRCLTFHKVSG*GPQNVLAHPHC
Trigger: ACAGTGAGGATGAGCTAAAACGTTCTGTGGCCCTCAGCCAGAGACTTTGTGAAATGTTAGGCAACGAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
ENST00000473554.5
ENST00000484018.1
CDS CCA 72 bp TGCTGCTGTTCGTTGCCTAACATTTCACAAAGTCTCTaGCTGAGGGCCACAGAACGTTTTAGCTCATCCTCA +
Preference number: 6 (lower is better)
Translates to: CCCSLPNISQSL*LRATERFSSSS
Trigger: TGAGGATGAGCTAAAACGTTCTGTGGCCCTCAGCCAGAGACTTTGTGAAATGTTAGGCAACGAACAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
ENST00000473554.5
ENST00000484018.1
CDS CCA 72 bp TGGCTACAGGCAGGATACAGTTTGGGGGCCCCTAGTTaGAGGTCTCTGGTTACTGTATGGCAAATAACTTTA +
Preference number: 6 (lower is better)
Translates to: WLQAGYSLGAPS*RSLVTVWQITL
Trigger: TAAAGTTATTTGCCATACAGTAACCAGAGACCTCCAACTAGGGGCCCCCAAACTGTATCCTGCCTGTAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418019.5
CDS TCA 72 bp ATCTCGATCACTCTGCACGGCAGCCTCTTGGATTTTTaGTACCTCCAGGTCATTGTAAGTAAACCACGCTTG +
Preference number: 6 (lower is better)
Translates to: ISITLHGSLLDF*YLQVIVSKPRL
Trigger: CAAGCGTGGTTTACTTACAATGACCTGGAGGTATCAAAAATCCAAGAGGCTGCCGTGCAGAGTGATCGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS GCA 72 bp TGTCAAAGAAGGAATCGTCCGAGCTATTCCACTTCCTaGTACAGTCTTAATCGATCCTCTACCCGGATTACC +
Preference number: 6 (lower is better)
Translates to: CQRRNRPSYSTS*YSLNRSSTRIT
Trigger: GGTAATCCGGGTAGAGGATCGATTAAGACTGTAGCAGGAAGTGGAATAGCTCGGACGATTCCTTCTTTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258399.8
ENST00000338465.5
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
ENST00000478329.1
CDS CCA 72 bp ATTCTGATCCTTGTGCCAAAGGCAAAGCACTCTTCTTaGGACACTACTCATATTCTGCAGCTATGCCAGTTC +
Preference number: 6 (lower is better)
Translates to: ILILVPKAKHSS*DTTHILQLCQF
Trigger: GAACTGGCATAGCTGCAGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGCCTTTGGCACAAGGATCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000338465.5
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS CAA 72 bp TATTCTGATCCTTGTGCCAAAGGCAAAGCACTCTTCTaGGGACACTACTCATATTCTGCAGCTATGCCAGTT +
Preference number: 6 (lower is better)
Translates to: YSDPCAKGKALF*GHYSYSAAMPV
Trigger: AACTGGCATAGCTGCAGAATATGAGTAGTGTCCCAAGAAGAGTGCTTTGCCTTTGGCACAAGGATCAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000338465.5
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS CAA 72 bp AGGTGTAGAAGGGCTGGTGATGCAGGAATTCACCATTaGAGAGGCTTTCAATGGTCTAGAAATTGCCATATG +
Preference number: 6 (lower is better)
Translates to: RCRRAGDAGIHH*RGFQWSRNCHM
Trigger: CATATGGCAATTTCTAGACCATTGAAAGCCTCTCAAATGGTGAATTCCTGCATCACCAGCCCTTCTACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000418019.5
ENST00000454775.5
ENST00000475553.1
CDS TCA 72 bp AGTTGGCTTATCATCATCTTCATGACTCAGAGATGGTaGAGCATCTCTCTTACTTATCTCCAAGACAGCTGC +
Preference number: 6 (lower is better)
Translates to: SWLIIIFMTQRW*SISLTYLQDSC
Trigger: GCAGCTGTCTTGGAGATAAGTAAGAGAGATGCTTCACCATCTCTGAGTCATGAAGATGATGATAAGCCAACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
ENST00000473554.5
CDS TCA 72 bp AGGTCTCTGGTTACTGTATGGCAAATAACTTTATTCTaGTCCTTGTGCCAAAGGCAAAGCACTCTTCTTGGG +
Preference number: 6 (lower is better)
Translates to: RSLVTVWQITLF*SLCQRQSTLLG
Trigger: CCCAAGAAGAGTGCTTTGCCTTTGGCACAAGGATCAGAATAAAGTTATTTGCCATACAGTAACCAGAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418019.5
CDS GCA 72 bp GGGCATAATTTTGAATCTTTTTCCAGGTCTTCCTGCTaGTGTTCGTTGCCTAACATTTCACAAAGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: GHNFESFSRSSC*CSLPNISQSLW
Trigger: CCAGAGACTTTGTGAAATGTTAGGCAACGAACAGCAGCAGGAAGACCTGGAAAAAGATTCAAAATTATGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
ENST00000473554.5
CDS CAA 72 bp TGCTGCCCAATCTTATTGTTAAGCGAGAGAGCCACATaGAAGCTATATCGTTTCAAATGGAGAATGAGGACC +
Preference number: 6 (lower is better)
Translates to: CCPILLLSERAT*KLYRFKWRMRT
Trigger: GGTCCTCATTCTCCATTTGAAACGATATAGCTTCAATGTGGCTCTCTCGCTTAACAATAAGATTGGGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
ENST00000475553.1
CDS CAA 72 bp TCAGTAAAACTGGCAGGATCCAGCTCTGTGATTGTTTaGGGCTTCTCAGTTTCCATAGTGTCTGGATTTTCT +
Preference number: 6 (lower is better)
Translates to: SVKLAGSSSVIV*GFSVSIVSGFS
Trigger: AGAAAATCCAGACACTATGGAAACTGAGAAGCCCAAAACAATCACAGAGCTGGATCCTGCCAGTTTTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS CAA 72 bp TATAGGACTGGGCAAAGAACCAGCTCTGTGATTGTTTaGGGCTTCTCAGTTTCCATAGTGTCTGGATTTTCT +
Preference number: 6 (lower is better)
Translates to: YRTGQRTSSVIV*GFSVSIVSGFS
Trigger: AGAAAATCCAGACACTATGGAAACTGAGAAGCCCAAAACAATCACAGAGCTGGTTCTTTGCCCAGTCCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473554.5
CDS TCA 72 bp CGAAAAACCCTATGTAATAGCAATTCACCTTTATTCTaGTCCTTGTGCCAAAGGCAAAGCACTCTTCTTGGG +
Preference number: 6 (lower is better)
Translates to: RKTLCNSNSPLF*SLCQRQSTLLG
Trigger: CCCAAGAAGAGTGCTTTGCCTTTGGCACAAGGATCAGAATAAAGGTGAATTGCTATTACATAGGGTTTTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000338465.5
ENST00000415516.5
ENST00000454775.5
CDS GCA 72 bp AACATCCTCATTTCCAGAGTCCTCATCAGAACCCAATaGATCCACAAAGGAGTTGTTAAACTCTTGAAGACT +
Preference number: 6 (lower is better)
Translates to: NILISRVLIRTQ*IHKGVVKLLKT
Trigger: AGTCTTCAAGAGTTTAACAACTCCTTTGTGGATGCATTGGGTTCTGATGAGGACTCTGGAAATGAGGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS CAA 72 bp GTAAAACTGGCAGGATCTCTTCCTGTAGCTGTCCCTTaGTTAATTTTAGGAAGTTATAGGACTGGGCAAAGA +
Preference number: 6 (lower is better)
Translates to: VKLAGSLPVAVP*LILGSYRTGQR
Trigger: TCTTTGCCCAGTCCTATAACTTCCTAAAATTAACAAAGGGACAGCTACAGGAAGAGATCCTGCCAGTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473554.5
CDS GCA 72 bp TCAAAGGATCCTTCTTTCCACTTTGTAATCCCAGTCTaGATACTTCGAATTCTGATAGGACCATGTATCTTC +
Preference number: 6 (lower is better)
Translates to: SKDPSFHFVIPV*ILRILIGPCIF
Trigger: GAAGATACATGGTCCTATCAGAATTCGAAGTATGCAGACTGGGATTACAAAGTGGAAAGAAGGATCCTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000338465.5
ENST00000418019.5
ENST00000454775.5
CDS CCA 72 bp CATTTCTTGAATATCATCTTCTGCAAATCCGGTATCTaGGCTGCTAGTTGGCTTATCATCATCTTCATGACT +
Preference number: 6 (lower is better)
Translates to: HFLNIIFCKSGI*AASWLIIIFMT
Trigger: AGTCATGAAGATGATGATAAGCCAACTAGCAGCCCAGATACCGGATTTGCAGAAGATGATATTCAAGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
ENST00000473554.5
CDS CAA 72 bp GGAAGGTCAATAGAGAGGTCATTAAACTGTTCTCTTTaGGGGATAATCTCTCCACATGCTTTACAAATGATG +
Preference number: 6 (lower is better)
Translates to: GRSIERSLNCSL*GIISPHALQMM
Trigger: CATCATTTGTAAAGCATGTGGAGAGATTATCCCCAAAAGAGAACAGTTTAATGACCTCTCTATTGACCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258399.8
ENST00000415516.5
ENST00000418019.5
ENST00000454775.5
CDS TCA 72 bp AAATCCCAAACTTCTTTTGGCAGAGGGAGTCTGGCTTaGAACATTAGTCACATATTATTCAAATTTCATCAG +
Preference number: 6 (lower is better)
Translates to: KSQTSFGRGSLA*NISHILFKFHQ
Trigger: CTGATGAAATTTGAATAATATGTGACTAATGTTTCAAGCCAGACTCCCTCTGCCAAAAGAAGTTTGGGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486242.1