Pregenerated sensors for USP27X-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000234390

Ensembl transcript IDs: ENST00000437322.2

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GCCACCTTGTGGTCAGAGTTGGATTTATCACCCAGGTGCATCTACTaGGAAGGAGAGCTGTCTCTCCTAAGGATAGCCCCAACTGCCTGC	+
Preference number: 5 (lower is better) Translates to: ATLWSELDLSPRCIY*EGELSLLRIAPTAC Trigger: GCAGGCAGTTGGGGCTATCCTTAGGAGAGACAGCTCTCCTTCGCAGTAGATGCACCTGGGTGATAAATCCAACTCTGACCACAAGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS CCA 90 bp	CCTTTTGGGGAAGCCATCCCTGATTTCAGTAGCCCTGGAGTAAGTTaGAGTGCTGTGTCCACAGCTCTTGGTACATCTGGCCCTCGGTCA	+
Preference number: 5 (lower is better) Translates to: PFGEAIPDFSSPGVS*SAVSTALGTSGPRS Trigger: TGACCGAGGGCCAGATGTACCAAGAGCTGTGGACACAGCACTCCAACTTACTCCAGGGCTACTGAAATCAGGGATGGCTTCCCCAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS TCA 90 bp	CTCTTGGTACATCTGGCCCTCGGTCAGTGCAGAATAAACATTTGTTaGGTGAATGGTGACAGAGCCCTCCATTTTCAGAACACGCTGGCC	+
Preference number: 5 (lower is better) Translates to: LLVHLALGQCRINIC*VNGDRALHFQNTLA Trigger: GGCCAGCGTGTTCTGAAAATGGAGGGCTCTGTCACCATTCACTCAACAAATGTTTATTCTGCACTGACCGAGGGCCAGATGTACCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS GCA 90 bp	TACTCTTTTGCCACCTTGTGGTCAGAGTTGGATTTATCACCCAGGTaGATCTACTGCGAAGGAGAGCTGTCTCTCCTAAGGATAGCCCCA	+
Preference number: 5 (lower is better) Translates to: YSFATLWSELDLSPR*IYCEGELSLLRIAP Trigger: TGGGGCTATCCTTAGGAGAGACAGCTCTCCTTCGCAGTAGATGCACCTGGGTGATAAATCCAACTCTGACCACAAGGTGGCAAAAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS CCA 90 bp	CTGTCAGATCTTTGTGAGGCAGAGATGGTAACATTTGCTAGGATCTaGGTCCAGATCCACATAAGGACAAAGCATCTAAAGATTTTGGTG	+
Preference number: 5 (lower is better) Translates to: LSDLCEAEMVTFARI*VQIHIRTKHLKILV Trigger: CACCAAAATCTTTAGATGCTTTGTCCTTATGTGGATCTGGACCCAGATCCTAGCAAATGTTACCATCTCTGCCTCACAAAGATCTGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS CCA 72 bp	GCCAGGAGGCCGGCTGTCAAGCCATTAACCCACCCGTaGCCTTGGGAGCCCAGGAGGACGCGAGCAGCAGGC	+
Preference number: 6 (lower is better) Translates to: ARRPAVKPLTHP*PWEPRRTRAAG Trigger: GCCTGCTGCTCGCGTCCTCCTGGGCTCCCAAGGCCACGGGTGGGTTAATGGCTTGACAGCCGGCCTCCTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS CAA 72 bp	GAGGCCGGCTGTCAAGCCATTAACCCACCCGTGGCCTaGGGAGCCCAGGAGGACGCGAGCAGCAGGCCCAGA	+
Preference number: 6 (lower is better) Translates to: EAGCQAINPPVA*GAQEDASSRPR Trigger: TCTGGGCCTGCTGCTCGCGTCCTCCTGGGCTCCCAAGGCCACGGGTGGGTTAATGGCTTGACAGCCGGCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS CCA 72 bp	GGTGACAGAGCCCTCCATTTTCAGAACACGCTGGCCTaGGCAGAGTCCAGGTGGACCTATGGGCTTCTGCAG	+
Preference number: 6 (lower is better) Translates to: GDRALHFQNTLA*AESRWTYGLLQ Trigger: CTGCAGAAGCCCATAGGTCCACCTGGACTCTGCCCAGGCCAGCGTGTTCTGAAAATGGAGGGCTCTGTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS GCA 72 bp	GCCACCTTGTGGTCAGAGTTGGATTTATCACCCAGGTaGATCTACTGCGAAGGAGAGCTGTCTCTCCTAAGG	+
Preference number: 6 (lower is better) Translates to: ATLWSELDLSPR*IYCEGELSLLR Trigger: CCTTAGGAGAGACAGCTCTCCTTCGCAGTAGATGCACCTGGGTGATAAATCCAACTCTGACCACAAGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS CCA 72 bp	GAAGCCATCCCTGATTTCAGTAGCCCTGGAGTAAGTTaGAGTGCTGTGTCCACAGCTCTTGGTACATCTGGC	+
Preference number: 6 (lower is better) Translates to: EAIPDFSSPGVS*SAVSTALGTSG Trigger: GCCAGATGTACCAAGAGCTGTGGACACAGCACTCCAACTTACTCCAGGGCTACTGAAATCAGGGATGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS GCA 72 bp	TGGTCAGAGTTGGATTTATCACCCAGGTGCATCTACTaGGAAGGAGAGCTGTCTCTCCTAAGGATAGCCCCA	+
Preference number: 6 (lower is better) Translates to: WSELDLSPRCIY*EGELSLLRIAP Trigger: TGGGGCTATCCTTAGGAGAGACAGCTCTCCTTCGCAGTAGATGCACCTGGGTGATAAATCCAACTCTGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS TCA 72 bp	AGAGTCCAGGTGGACCTATGGGCTTCTGCAGGAAGTTaGTCACTAAGTCAACAAGTTACCATGGCTAATCTT	+
Preference number: 6 (lower is better) Translates to: RVQVDLWASAGS*SLSQQVTMANL Trigger: AAGATTAGCCATGGTAACTTGTTGACTTAGTGATCAACTTCCTGCAGAAGCCCATAGGTCCACCTGGACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS CAA 72 bp	ATTGTCATTTACTCTTTTGCCACCTTGTGGTCAGAGTaGGATTTATCACCCAGGTGCATCTACTGCGAAGGA	+
Preference number: 6 (lower is better) Translates to: IVIYSFATLWSE*DLSPRCIYCEG Trigger: TCCTTCGCAGTAGATGCACCTGGGTGATAAATCCAACTCTGACCACAAGGTGGCAAAAGAGTAAATGACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS CAA 90 bp	AGGATCTGGGTCCAGATCCACATAAGGACAAAGCATCTAAAGATTTaGGTGACACCCTCCACACGTGATTCAAAACAAAAGCATCATGTA	+
Preference number: 6 (lower is better) Translates to: RIWVQIHIRTKHLKI*VTPSTRDSKQKHHV Trigger: TACATGATGCTTTTGTTTTGAATCACGTGTGGAGGGTGTCACCAAAATCTTTAGATGCTTTGTCCTTATGTGGATCTGGACCCAGATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437322.2
CDS CAA 72 bp	GTCCAGATCCACATAAGGACAAAGCATCTAAAGATTTaGGTGACACCCTCCACACGTGATTCAAAACAAAAG	+
Preference number: 6 (lower is better) Translates to: VQIHIRTKHLKI*VTPSTRDSKQK Trigger: CTTTTGTTTTGAATCACGTGTGGAGGGTGTCACCAAAATCTTTAGATGCTTTGTCCTTATGTGGATCTGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437322.2