RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP22 (Homo sapiens)

Ensembl gene IDs: ENSG00000124422

Ensembl transcript IDs: ENST00000261497.9, ENST00000455117.6, ENST00000476111.5, ENST00000478443.1, ENST00000537526.6, ENST00000579645.5, ENST00000584538.1

Found 475 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCTCCCCGTCCGTGTGGTCCATCCCGACCCGATGGGTCCCAGGTaGAGAGGGGCCACATCTGCATGGGAGGTGGTGTCACCAGGCCGG +
Preference number: 1 (lower is better)
Translates to: SLPVRVVHPDPMGPR*RGATSAWEVVSPGR
Trigger: CCGGCCTGGTGACACCACCTCCCATGCAGATGTGGCCCCTCTGCACCTGGGACCCATCGGGTCGGGATGGACCACACGGACGGGGAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 90 bp GGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTaGCAGGCAGCGGTAGCCAGGCAATGGGATAGAAGGCAAAGAAAA +
Preference number: 1 (lower is better)
Translates to: GSTRGHSSFATNTLG*QAAVARQWDRRQRK
Trigger: TTTTCTTTGCCTTCTATCCCATTGCCTGGCTACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR CCA 90 bp AGCTGCCAGAAAGCCTTCTGCACTCCGCAAGACACCCCAGTAAACTaGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGC +
Preference number: 1 (lower is better)
Translates to: SCQKAFCTPQDTPVN*GVPRWQAFMKALPS
Trigger: GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAGAAGGCTTTCTGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR CCA 90 bp TTCTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTaGCAAGCCTTCATGAAGGCACTGCCCAGCTCACAATCCTGTGGG +
Preference number: 1 (lower is better)
Translates to: FCTPQDTPVNWGVPR*QAFMKALPSSQSCG
Trigger: CCCACAGGATTGTGAGCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR TCA 90 bp AACATCTGCCCACCGCTGAGACAGATGATCCTGTTCCTGCAGGACTaGAGAAGCCTCAGTTCAGATGCTGCTGGGGCTCCTGGGACAAGC +
Preference number: 1 (lower is better)
Translates to: NICPPLRQMILFLQD*RSLSSDAAGAPGTS
Trigger: GCTTGTCCCAGGAGCCCCAGCAGCATCTGAACTGAGGCTTCTTCAGTCCTGCAGGAACAGGATCATCTGTCTCAGCGGTGGGCAGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR TCA 90 bp AACCCATCAGACACCGGCAGACACTGCATTTACTCCAGACTGAGATaGCAGACACACCGTATGAGCTGCAGCACAACTCTCCTCCGCTGC +
Preference number: 1 (lower is better)
Translates to: NPSDTGRHCIYSRLR*QTHRMSCSTTLLRC
Trigger: GCAGCGGAGGAGAGTTGTGCTGCAGCTCATACGGTGTGTCTGTCATCTCAGTCTGGAGTAAATGCAGTGTCTGCCGGTGTCTGATGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 90 bp GCAAGGCCCTCTGTCCCGCACACTACACCTCTGTGTCCAGCTTACTaGTTTCATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCA +
Preference number: 1 (lower is better)
Translates to: ARPSVPHTTPLCPAY*FHGPIILQQVGAFP
Trigger: TGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATGAAAGCAGTAAGCTGGACACAGAGGTGTAGTGTGCGGGACAGAGGGCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR CCA 90 bp CTCTGTCCCGCACACTACACCTCTGTGTCCAGCTTACTGCTTTCATaGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGT +
Preference number: 1 (lower is better)
Translates to: LCPAHYTSVSSLLLS*THNLTAGRGLSTPS
Trigger: ACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATGAAAGCAGTAAGCTGGACACAGAGGTGTAGTGTGCGGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR CCA 90 bp CCTGCAGGACTGAAGAAGCCTCAGTTCAGATGCTGCTGGGGCTCCTaGGACAAGCACAGCCCGAGACACACTTGCTTCATAAACTGTATT +
Preference number: 1 (lower is better)
Translates to: PAGLKKPQFRCCWGS*DKHSPRHTCFINCI
Trigger: AATACAGTTTATGAAGCAAGTGTGTCTCGGGCTGTGCTTGTCCCAGGAGCCCCAGCAGCATCTGAACTGAGGCTTCTTCAGTCCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR TCA 90 bp CCATACAGCCCACAGAGCCAACAGTGTTTACTCCCTGGCTGTCTATaGAAACATCTGCCCACCGCTGAGACAGATGATCCTGTTCCTGCA +
Preference number: 1 (lower is better)
Translates to: PYSPQSQQCLLPGCL*KHLPTAETDDPVPA
Trigger: TGCAGGAACAGGATCATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACTGTTGGCTCTGTGGGCTGTATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR TCA 90 bp CGTAGTGTCCGTACTTCCGAAGCTAGGAGGCTGCTTCACAGCCGCTaGGAAAATGGAGGTGAAGAGTTCCATACTCTCCGTATTTTAACA +
Preference number: 1 (lower is better)
Translates to: RSVRTSEARRLLHSR*ENGGEEFHTLRILT
Trigger: TGTTAAAATACGGAGAGTATGGAACTCTTCACCTCCATTTTCTCAGCGGCTGTGAAGCAGCCTCCTAGCTTCGGAAGTACGGACACTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 90 bp TCTCTTTCAGCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTaGCACCACGCCCGAAAGTACACCAAATGTAAAGCAGAGGCAGAC +
Preference number: 1 (lower is better)
Translates to: SLSALLTSSITVSFY*HHARKYTKCKAEAD
Trigger: GTCTGCCTCTGCTTTACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGCTGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 90 bp AGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTaGTTCAGCAGTTCAAGCTCCCGTTTGGTTGGTTCCCAAGTTGAA +
Preference number: 1 (lower is better)
Translates to: RPMVQFEVIFLLFGL*FSSSSSRLVGSQVE
Trigger: TTCAACTTGGGAACCAACCAAACGGGAGCTTGAACTGCTGAAGCACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
3UTR TCA 90 bp TACAAGAAACAATGCACATCCTTCTACTTTCTCTTTCAGCTCTGCTaGCAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAA +
Preference number: 1 (lower is better)
Translates to: YKKQCTSFYFLFQLC*QAQSRCHFTATTPE
Trigger: TTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGCTGAAAGAGAAAGTAGAAGGATGTGCATTGTTTCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR TCA 90 bp GCACTGTCACCCAAACAGCAGAACTTGGTCACATGGGACCATTTCTaGAAATCTCGGCCCATCTCTGTTTCTCTGGTAATTCATTTTATA +
Preference number: 1 (lower is better)
Translates to: ALSPKQQNLVTWDHF*KSRPISVSLVIHFI
Trigger: TATAAAATGAATTACCAGAGAAACAGAGATGGGCCGAGATTTTCAGAAATGGTCCCATGTGACCAAGTTCTGCTGTTTGGGTGACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTGGTCACTCTGTGCTGTaGGGCCCCCGTTGCACCCCC +
Preference number: 2 (lower is better)
Translates to: LHSARHPSKLGRPKVASLGHSVL*GPRCTP
Trigger: GGGGGTGCAACGGGGGCCTCACAGCACAGAGTGACC...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAGCAGCGGTCACTCTGTaGTGTGAGGCCCCCGTTGCA +
Preference number: 2 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVAAVTL*CEAPVA
Trigger: TGCAACGGGGGCCTCACAGCACAGAGTGACCGCTGC...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAACAACTCTCCTCCGCTaGGCCCACTGCCAGCCACCA +
Preference number: 2 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVTTLLR*AHCQPP
Trigger: TGGTGGCTGGCAGTGGGCGCAGCGGAGGAGAGTTGT...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCGCAGCGGTCACTCTGTaGTGTGAGGCCCCCGTTGCA +
Preference number: 2 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSAAVTL*CEAPVA
Trigger: TGCAACGGGGGCCTCACAGCACAGAGTGACCGCTGC...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGGGTCACTCTGTGCTGTaGGGCCCCCGTTGCACCCCC +
Preference number: 2 (lower is better)
Translates to: ALLTSSITVSFYCHHARKGHSVL*GPRCTP
Trigger: GGGGGTGCAACGGGGGCCTCACAGCACAGAGTGACC...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAGACAGACACACCGTATaGGCTGCAGCACAACTCTCC +
Preference number: 2 (lower is better)
Translates to: GRRDKMQAPPEATPASRPDRHTV*AAAQLS
Trigger: GGAGAGTTGTGCTGCAGCTCATACGGTGTGTCTGTC...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTGGCACGAGAACTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LHSARHPSKLGRPKVASLGTRTA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAGTTCTCGTGCC...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTAAGCCTCAGTTCAGATaGTGCTGGGGCTCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: LHSARHPSKLGRPKVASLKPQFR*CWGSWD
Trigger: GTCCCAGGAGCCCCAGCAGCATCTGAACTGAGGCTT...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCGACAGACACACCGTATaGGCTGCAGCACAACTCTCC +
Preference number: 2 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSDRHTV*AAAQLS
Trigger: GGAGAGTTGTGCTGCAGCTCATACGGTGTGTCTGTC...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTACACACCGTATGAGCTaGAGCACAACTCTCCTCCGC +
Preference number: 2 (lower is better)
Translates to: LHSARHPSKLGRPKVASLTHRMS*STTLLR
Trigger: GCGGAGGAGAGTTGTGCTGCAGCTCATACGGTGTGT...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTGCCTCCCCGTCCGTGTaGTCCATCCCGACCCGATGG +
Preference number: 2 (lower is better)
Translates to: LVPTSFSMACELRIGFTFASPSV*SIPTRW
Trigger: CCATCGGGTCGGGATGGACCACACGGACGGGGAGGC...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGCGCGACCAACACCCTTaGCTGCCAGGCAGCGGTAGC +
Preference number: 2 (lower is better)
Translates to: ALLTSSITVSFYCHHARKRDQHP*LPGSGS
Trigger: GCTACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCG...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTGGGAGGATCACTTTGTaGGGCTTGCCAATGCATTGC +
Preference number: 2 (lower is better)
Translates to: LHSARHPSKLGRPKVASLGRITL*GLPMHC
Trigger: GCAATGCATTGGCAAGCCTCACAAAGTGATCCTCCC...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCGGGAGGATCACTTTGTaGGGCTTGCCAATGCATTGC +
Preference number: 2 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSGRITL*GLPMHC
Trigger: GCAATGCATTGGCAAGCCTCACAAAGTGATCCTCCC...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCAGAACAGACACGCTTaGAAACGCGACGTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: LHSARHPSKLGRPKVASLQNRHA*KRDVVS
Trigger: GGACACTACGTCGCGTTTTCAAGCGTGTCTGTTCTG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCACGAGATGCTTCCACGTaGAGCTTGATGCTGTTACCT +
Preference number: 2 (lower is better)
Translates to: GRRDKMQAPPEATPASRPRDAST*SLMLLP
Trigger: AGGTAACAGCATCAAGCTGCACGTGGAAGCATCTCG...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGCATCTGCATGGGAGGTaGTGTCACCAGGCCGGGGAG +
Preference number: 2 (lower is better)
Translates to: ALLTSSITVSFYCHHARKHLHGR*CHQAGE
Trigger: CTCCCCGGCCTGGTGACACCACCTCCCATGCAGATG...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGCAAGAGATGTTCTGGTaGCGGGTGTACGCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGQEMFW*RVYAAP
Trigger: AGGAGCAGCGTACACCCGTCACCAGAACATCTCTTG...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCTGCACCCCCATGTCATaGCACAAGAGATGTTCTGGT +
Preference number: 2 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSCTPMS*HKRCSG
Trigger: ACCAGAACATCTCTTGTGTCATGACATGGGGGTGCA...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAGCATTTACTCCAGACTaGGATGACAGACACACCGTA +
Preference number: 2 (lower is better)
Translates to: GRRDKMQAPPEATPASRPAFTPD*DDRHTV
Trigger: TACGGTGTGTCTGTCATCTCAGTCTGGAGTAAATGC...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCCTCTTTCAGCTCTGCTaGCAAGCTCAATCACGGTGT +
Preference number: 2 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSLFQLC*QAQSRC
Trigger: ACACCGTGATTGAGCTTGTCAGCAGAGCTGAAAGAG...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTACAACTCTCCTCCGCTaGGCCCACTGCCAGCCACCA +
Preference number: 2 (lower is better)
Translates to: LVPTSFSMACELRIGFTFTTLLR*AHCQPP
Trigger: TGGTGGCTGGCAGTGGGCGCAGCGGAGGAGAGTTGT...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCCTGAGAAAATGGAGGTaGAGAGTTCCATACTCTCCG +
Preference number: 2 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSLRKWR*RVPYSP
Trigger: CGGAGAGTATGGAACTCTTCACCTCCATTTTCTCAG...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCCTTTCCACACCGAGTaGTGGGGAACGCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: SVYSLAVYENICPPLRQMPFHTE*WGTPGS
Trigger: GCTGCCTGGCGTTCCCCAGCACTCGGTGTGGAAAGG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCACTGTGTCCAGCTTACTaGTTTCATGGACCCATAATC +
Preference number: 2 (lower is better)
Translates to: GRRDKMQAPPEATPASRPLCPAY*FHGPII
Trigger: GATTATGGGTCCATGAAAGCAGTAAGCTGGACACAG...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGACCAACACCCTTGGCTaGCAGGCAGCGGTAGCCAGG +
Preference number: 2 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGTNTLG*QAAVAR
Trigger: CCTGGCTACCGCTGCCTGGCAGCCAAGGGTGTTGGT...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCGTCTATGAAAACATCTaGCCACCGCTGAGACAGATG +
Preference number: 2 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSVYENI*PPLRQM
Trigger: CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGAC...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCATCTGCATGGGAGGTaGTGTCACCAGGCCGGGGAG +
Preference number: 2 (lower is better)
Translates to: SVYSLAVYENICPPLRQMHLHGR*CHQAGE
Trigger: CTCCCCGGCCTGGTGACACCACCTCCCATGCAGATG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGGGGGCCACATCTGCATaGGAGGTGGTGTCACCAGGC +
Preference number: 2 (lower is better)
Translates to: SVYSLAVYENICPPLRQMGATSA*EVVSPG
Trigger: GCCTGGTGACACCACCTCCCATGCAGATGTGGCCCC...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTGCGGTAGCCAGGCAATaGGATAGAAGGCAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LHSARHPSKLGRPKVASLAVARQ*DRRQRK
Trigger: TTTTCTTTGCCTTCTATCCCATTGCCTGGCTACCGC...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR CAA 90 bp GCTTCCACGTGCAGCTTGATGCTGTTACCTGCAGAACAGACACGCTaGAAAACGCGACGTAGTGTCCGTACTTCCGAAGCTAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: ASTCSLMLLPAEQTR*KTRRSVRTSEARRL
Trigger: CAGCCTCCTAGCTTCGGAAGTACGGACACTACGTCGCGTTTTCAAGCGTGTCTGTTCTGCAGGTAACAGCATCAAGCTGCACGTGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGCAAGAGATGTTCTGGTaGCGGGTGTACGCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: ALLTSSITVSFYCHHARKQEMFW*RVYAAP
Trigger: AGGAGCAGCGTACACCCGTCACCAGAACATCTCTTG...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTACCTTTCCACACCGAGTaGTGGGGAACGCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: AQSRCHFTATTPESTPNVPFHTE*WGTPGS
Trigger: GCTGCCTGGCGTTCCCCAGCACTCGGTGTGGAAAGG...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGATGCTGTTACCTaGAGAACAGACACGCTTGAA +
Preference number: 2 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTLDAVT*RTDTLE
Trigger: TTCAAGCGTGTCTGTTCTGCAGGTAACAGCATCAAG...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGACACACCGTATGAGCTaGAGCACAACTCTCCTCCGC +
Preference number: 2 (lower is better)
Translates to: ALLTSSITVSFYCHHARKTHRMS*STTLLR
Trigger: GCGGAGGAGAGTTGTGCTGCAGCTCATACGGTGTGT...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTAGGGGCCACATCTGCATaGGAGGTGGTGTCACCAGGC +
Preference number: 2 (lower is better)
Translates to: AQSRCHFTATTPESTPNVGATSA*EVVSPG
Trigger: GCCTGGTGACACCACCTCCCATGCAGATGTGGCCCC...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAAGCTTACTGCTTTCATaGACCCATAATCTTACAGCA +
Preference number: 2 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVSLLLS*THNLTA
Trigger: TGCTGTAAGATTATGGGTCCATGAAAGCAGTAAGCT...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCCCAAACAGCAGAACTTaGTCACATGGGACCATTTCT +
Preference number: 2 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSPNSRT*SHGTIS
Trigger: AGAAATGGTCCCATGTGACCAAGTTCTGCTGTTTGG...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCCTCAGTTCAGATGCTaGTGGGGCTCCTGGGACAAG +
Preference number: 2 (lower is better)
Translates to: SVYSLAVYENICPPLRQMPQFRC*WGSWDK
Trigger: CTTGTCCCAGGAGCCCCAGCAGCATCTGAACTGAGG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATGCAGTGAGTAGCAGCTaGCACTGTCACTACCCCCTC +
Preference number: 2 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDAVSSS*HCHYPL
Trigger: GAGGGGGTAGTGACAGTGGCAGCTGCTACTCACTGC...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGGTAGTCCCAGCTACTTaGGAGGCTGCGGCACGAGAA +
Preference number: 2 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGVVPAT*EAAARE
Trigger: TTCTCGTGCCGCAGCCTCCCAAGTAGCTGGGACTAC...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATCTCCCTGGCTGTCTATaGAAACATCTGCCCACCGCT +
Preference number: 2 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDLPGCL*KHLPTA
Trigger: AGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAG...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGCCGAAGCTAGGAGGCTaGTTCACAGCCGCTGAGAAA +
Preference number: 2 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGPKLGG*FTAAEK
Trigger: TTTCTCAGCGGCTGTGAAGCAGCCTCCTAGCTTCGG...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTAGCAGACGAGACAAGATaGAGGCTCCACCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: AQSRCHFTATTPESTPNVADETR*RLHQRP
Trigger: TGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGC...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATTTCCACACCGAGTGCTaGGGAACGCCAGGCAGCGGT +
Preference number: 2 (lower is better)
Translates to: PTSFSMACELRIGFTFLNFHTEC*GTPGSG
Trigger: ACCGCTGCCTGGCGTTCCCCAGCACTCGGTGTGGAA...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTAGCTTACTGCTTTCATaGACCCATAATCTTACAGCA +
Preference number: 2 (lower is better)
Translates to: LHSARHPSKLGRPKVASLSLLLS*THNLTA
Trigger: TGCTGTAAGATTATGGGTCCATGAAAGCAGTAAGCT...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR CAA 90 bp CGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTaGTGCTTCAGCAGTTCAAGCTCCCGTTTGGTTGGTTCCCAAGTT +
Preference number: 2 (lower is better)
Translates to: RRPMVQFEVIFLLFG*CFSSSSSRLVGSQV
Trigger: AACTTGGGAACCAACCAAACGGGAGCTTGAACTGCTGAAGCACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
3UTR-3UTR TCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCAGAACAGACACGCTTaGAAACGCGACGTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: SVYSLAVYENICPPLRQMQNRHA*KRDVVS
Trigger: GGACACTACGTCGCGTTTTCAAGCGTGTCTGTTCTG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTACTCCAGACTGAGATaGCAGACACACCGTATGAGC +
Preference number: 2 (lower is better)
Translates to: LVPTSFSMACELRIGFTFYSRLR*QTHRMS
Trigger: GCTCATACGGTGTGTCTGTCATCTCAGTCTGGAGTA...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTCTCTTTCAGCTCTGCTaGCAAGCTCAATCACGGTGT +
Preference number: 2 (lower is better)
Translates to: LVPTSFSMACELRIGFTFLFQLC*QAQSRC
Trigger: ACACCGTGATTGAGCTTGTCAGCAGAGCTGAAAGAG...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAATGTGAGGCTTGCCAATaGATTGCCTTTGTTTTTCTG +
Preference number: 2 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKCEACQ*IAFVFL
Trigger: CAGAAAAACAAAGGCAATGCATTGGCAAGCCTCACA...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTACGGTGTCATTTTACTaGCACCACGCCCGAAAGTAC +
Preference number: 2 (lower is better)
Translates to: LVPTSFSMACELRIGFTFTVSFY*HHARKY
Trigger: GTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGT...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTACTGCTTCACAGCCGCTaGGAAAATGGAGGTGAAGAG +
Preference number: 2 (lower is better)
Translates to: AQSRCHFTATTPESTPNVLLHSR*ENGGEE
Trigger: CTCTTCACCTCCATTTTCTCAGCGGCTGTGAAGCAG...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATCTGAGGTCAGGAGTTTaGGACATGGTGAAACCCCAT +
Preference number: 2 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDLRSGV*DMVKPH
Trigger: ATGGGGTTTCACCATGTCTCAAACTCCTGACCTCAG...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGGACACCGGCAGACACTaGATTTACTCCAGACTGAGA +
Preference number: 2 (lower is better)
Translates to: SVYSLAVYENICPPLRQMDTGRH*IYSRLR
Trigger: TCTCAGTCTGGAGTAAATGCAGTGTCTGCCGGTGTC...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATAAGCCTCAGTTCAGATaGTGCTGGGGCTCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: PTSFSMACELRIGFTFLNKPQFR*CWGSWD
Trigger: GTCCCAGGAGCCCCAGCAGCATCTGAACTGAGGCTT...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp ATCAGCCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTCCAAGCTTTTCGCTaGTCCTCCTTGGCGATTATT +
Preference number: 2 (lower is better)
Translates to: ISPRRPMVQFEVIFLLFGFQAFR*SSLAII
Trigger: AATAATCGCCAAGGAGGAGCAGCGAAAAGCTTGGAA...CCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
3UTR-3UTR CCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATAATGAACAGAGCACGTaGGCAAGAAACCGCATCCCT +
Preference number: 2 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDNEQST*ARNRIP
Trigger: AGGGATGCGGTTTCTTGCCCACGTGCTCTGTTCATT...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTATACTCCAGACTGAGATaGCAGACACACCGTATGAGC +
Preference number: 2 (lower is better)
Translates to: AQSRCHFTATTPESTPNVYSRLR*QTHRMS
Trigger: GCTCATACGGTGTGTCTGTCATCTCAGTCTGGAGTA...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp ATCAGCCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTGTGAGGCTTGCCAATaGATTGCCTTTGTTTTTCTG +
Preference number: 2 (lower is better)
Translates to: ISPRRPMVQFEVIFLLFGCEACQ*IAFVFL
Trigger: CAGAAAAACAAAGGCAATGCATTGGCAAGCCTCACA...CCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579645.5
3UTR-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATCCGAAGCTAGGAGGCTaGTTCACAGCCGCTGAGAAA +
Preference number: 2 (lower is better)
Translates to: PTSFSMACELRIGFTFLNPKLGG*FTAAEK
Trigger: TTTCTCAGCGGCTGTGAAGCAGCCTCCTAGCTTCGG...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTACGAGATGCTTCCACGTaGAGCTTGATGCTGTTACCT +
Preference number: 2 (lower is better)
Translates to: AQSRCHFTATTPESTPNVRDAST*SLMLLP
Trigger: AGGTAACAGCATCAAGCTGCACGTGGAAGCATCTCG...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTACTGAGAAAATGGAGGTaGAGAGTTCCATACTCTCCG +
Preference number: 2 (lower is better)
Translates to: AQSRCHFTATTPESTPNVLRKWR*RVPYSP
Trigger: CGGAGAGTATGGAACTCTTCACCTCCATTTTCTCAG...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATCTGCTTCACAGCCGCTaGGAAAATGGAGGTGAAGAG +
Preference number: 2 (lower is better)
Translates to: PTSFSMACELRIGFTFLNLLHSR*ENGGEE
Trigger: CTCTTCACCTCCATTTTCTCAGCGGCTGTGAAGCAG...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATCTTCCACGTGCAGCTTaGTGCTGTTACCTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: PTSFSMACELRIGFTFLNLPRAA*CCYLQN
Trigger: GTTCTGCAGGTAACAGCATCAAGCTGCACGTGGAAG...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATCTGTGTCCAGCTTACTaGTTTCATGGACCCATAATC +
Preference number: 2 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDLCPAY*FHGPII
Trigger: GATTATGGGTCCATGAAAGCAGTAAGCTGGACACAG...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATCTTGATGCTGTTACCTaGAGAACAGACACGCTTGAA +
Preference number: 2 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDLDAVT*RTDTLE
Trigger: TTCAAGCGTGTCTGTTCTGCAGGTAACAGCATCAAG...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATCTGTTCCTGCAGGACTaGAGAAGCCTCAGTTCAGAT +
Preference number: 2 (lower is better)
Translates to: PTSFSMACELRIGFTFLNLFLQD*RSLSSD
Trigger: ATCTGAACTGAGGCTTCTTCAGTCCTGCAGGAACAG...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR TCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGAAAAACAACAGAAAATaGACAGAGCACGTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGKNNRK*TEHVGK
Trigger: CTTGCCCACGTGCTCTGTTCATTTTCTGTTGTTTTT...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATTGTGAGGCTTGCCAATaGATTGCCTTTGTTTTTCTG +
Preference number: 2 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDCEACQ*IAFVFL
Trigger: CAGAAAAACAAAGGCAATGCATTGGCAAGCCTCACA...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATTCACTTTGTGAGGCTTaGCAATGCATTGCCTTTGTT +
Preference number: 2 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDSLCEA*QCIAFV
Trigger: AACAAAGGCAATGCATTGGCAAGCCTCACAAAGTGA...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGCCCTTAGTGGTCAGATaGACTTTGTCACAATGTACA +
Preference number: 2 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGPLVVR*TLSQCT
Trigger: TGTACATTGTGACAAAGTGCATCTGACCACTAAGGG...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATTCTCTGTACTATTTATaGCAGAGACCATACAGCCCA +
Preference number: 2 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDSLYYL*QRPYSP
Trigger: TGGGCTGTATGGTCTCTGCCATAAATAGTACAGAGA...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTATCACTTTGTGAGGCTTaGCAATGCATTGCCTTTGTT +
Preference number: 2 (lower is better)
Translates to: AQSRCHFTATTPESTPNVSLCEA*QCIAFV
Trigger: AACAAAGGCAATGCATTGGCAAGCCTCACAAAGTGA...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATGTCTATGAAAACATCTaGCCACCGCTGAGACAGATG +
Preference number: 2 (lower is better)
Translates to: PTSFSMACELRIGFTFLNVYENI*PPLRQM
Trigger: CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGAC...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTAAGAGGGATAAGAAAATaGCTGTTTCTAGAAAACCGC +
Preference number: 2 (lower is better)
Translates to: AQSRCHFTATTPESTPNVRGIRK*LFLENR
Trigger: GCGGTTTTCTAGAAACAGGCATTTTCTTATCCCTCT...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATAGAGGGATAAGAAAATaGCTGTTTCTAGAAAACCGC +
Preference number: 2 (lower is better)
Translates to: PTSFSMACELRIGFTFLNRGIRK*LFLENR
Trigger: GCGGTTTTCTAGAAACAGGCATTTTCTTATCCCTCT...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 72 bp GTCCGTGTGGTCCATCCCGACCCGATGGGTCCCAGGTaGAGAGGGGCCACATCTGCATGGGAGGTGGTGTCA +
Preference number: 3 (lower is better)
Translates to: VRVVHPDPMGPR*RGATSAWEVVS
Trigger: TGACACCACCTCCCATGCAGATGTGGCCCCTCTGCACCTGGGACCCATCGGGTCGGGATGGACCACACGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCGCTGTGAGGCCCCCGTaGCACCCCCATGTCATGACA +
Preference number: 3 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSAVRPP*HPHVMT
Trigger: TGTCATGACATGGGGGTGCAACGGGGGCCTCACAGC...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCGCTGTGAGGCCCCCGTaGCACCCCCATGTCATGACA +
Preference number: 3 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTAVRPP*HPHVMT
Trigger: TGTCATGACATGGGGGTGCAACGGGGGCCTCACAGC...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 72 bp AGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTaGCAGGCAGCGGTAGCCAGGCAATGGGATAGAAGG +
Preference number: 3 (lower is better)
Translates to: RGHSSFATNTLG*QAAVARQWDRR
Trigger: CCTTCTATCCCATTGCCTGGCTACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAGCAGAACAGACACGCTaGAAAACGCGACGTAGTGTC +
Preference number: 3 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVAEQTR*KTRRSV
Trigger: GACACTACGTCGCGTTTTCAAGCGTGTCTGTTCTGC...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 72 bp GTTCCTGCAGGACTGAAGAAGCCTCAGTTCAGATGCTaGTGGGGCTCCTGGGACAAGCACAGCCCGAGACAC +
Preference number: 3 (lower is better)
Translates to: VPAGLKKPQFRC*WGSWDKHSPRH
Trigger: GTGTCTCGGGCTGTGCTTGTCCCAGGAGCCCCAGCAGCATCTGAACTGAGGCTTCTTCAGTCCTGCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 72 bp CCTGTTCCTGCAGGACTGAAGAAGCCTCAGTTCAGATaGTGCTGGGGCTCCTGGGACAAGCACAGCCCGAGA +
Preference number: 3 (lower is better)
Translates to: PVPAGLKKPQFR*CWGSWDKHSPR
Trigger: TCTCGGGCTGTGCTTGTCCCAGGAGCCCCAGCAGCATCTGAACTGAGGCTTCTTCAGTCCTGCAGGAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR CCA 72 bp CCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTaGCAAGCCTTCATGAAGGCACTGCCCAGCTCACAA +
Preference number: 3 (lower is better)
Translates to: PQDTPVNWGVPR*QAFMKALPSSQ
Trigger: TTGTGAGCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCGCTTCCACGTGCAGCTaGATGCTGTTACCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTASTCS*MLLPAE
Trigger: TTCTGCAGGTAACAGCATCAAGCTGCACGTGGAAGC...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCCCTGAGGTCAGGAGTTaGAGACATGGTGAAACCCCA +
Preference number: 3 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSPEVRS*RHGETP
Trigger: TGGGGTTTCACCATGTCTCAAACTCCTGACCTCAGG...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCCCAAACAGCAGAACTaGGTCACATGGGACCATTTC +
Preference number: 3 (lower is better)
Translates to: LHSARHPSKLGRPKVASLPKQQN*VTWDHF
Trigger: GAAATGGTCCCATGTGACCAAGTTCTGCTGTTTGGG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR TCA 72 bp TTGCACCCCCATGTCATGACACAAGAGATGTTCTGGTaGCGGGTGTACGCTGCTCCTCCCACCCAGAGCACA +
Preference number: 3 (lower is better)
Translates to: LHPHVMTQEMFW*RVYAAPPTQST
Trigger: TGTGCTCTGGGTGGGAGGAGCAGCGTACACCCGTCACCAGAACATCTCTTGTGTCATGACATGGGGGTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR TCA 72 bp CCACCGCTGAGACAGATGATCCTGTTCCTGCAGGACTaGAGAAGCCTCAGTTCAGATGCTGCTGGGGCTCCT +
Preference number: 3 (lower is better)
Translates to: PPLRQMILFLQD*RSLSSDAAGAP
Trigger: AGGAGCCCCAGCAGCATCTGAACTGAGGCTTCTTCAGTCCTGCAGGAACAGGATCATCTGTCTCAGCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR CCA 72 bp AAAGCCTTCTGCACTCCGCAAGACACCCCAGTAAACTaGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCA +
Preference number: 3 (lower is better)
Translates to: KAFCTPQDTPVN*GVPRWQAFMKA
Trigger: TGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAGAAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 72 bp CGCGACGTAGTGTCCGTACTTCCGAAGCTAGGAGGCTaGTTCACAGCCGCTGAGAAAATGGAGGTGAAGAGT +
Preference number: 3 (lower is better)
Translates to: RDVVSVLPKLGG*FTAAEKMEVKS
Trigger: ACTCTTCACCTCCATTTTCTCAGCGGCTGTGAAGCAGCCTCCTAGCTTCGGAAGTACGGACACTACGTCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGCGGCACGAGAACTGCTaGAACCCAGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGRHENC*NPGGGG
Trigger: ACCTCCACCTCCTGGGTTCAAGCAGTTCTCGTGCCG...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCAAGCAAGACTCGCTCTaGAGACTAAAGGAGAAGTTA +
Preference number: 3 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSKQDSL*RLKEKL
Trigger: TAACTTCTCCTTTAGTCTCAAGAGCGAGTCTTGCTT...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCTACTTTTCCTCCCCCTaGTCCCTAGTTTCTAATTTC +
Preference number: 3 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSYFSSP*SLVSNF
Trigger: GAAATTAGAAACTAGGGACAAGGGGGAGGAAAAGTA...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR TCA 72 bp CGTACTTCCGAAGCTAGGAGGCTGCTTCACAGCCGCTaGGAAAATGGAGGTGAAGAGTTCCATACTCTCCGT +
Preference number: 3 (lower is better)
Translates to: RTSEARRLLHSR*ENGGEEFHTLR
Trigger: ACGGAGAGTATGGAACTCTTCACCTCCATTTTCTCAGCGGCTGTGAAGCAGCCTCCTAGCTTCGGAAGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR TCA 72 bp GACACCGGCAGACACTGCATTTACTCCAGACTGAGATaGCAGACACACCGTATGAGCTGCAGCACAACTCTC +
Preference number: 3 (lower is better)
Translates to: DTGRHCIYSRLR*QTHRMSCSTTL
Trigger: GAGAGTTGTGCTGCAGCTCATACGGTGTGTCTGTCATCTCAGTCTGGAGTAAATGCAGTGTCTGCCGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATCCTGAGGTCAGGAGTTaGAGACATGGTGAAACCCCA +
Preference number: 3 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDPEVRS*RHGETP
Trigger: TGGGGTTTCACCATGTCTCAAACTCCTGACCTCAGG...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGTTTCGCTGCTCCTCCTaGGCGATTATTTCCATGTCT +
Preference number: 3 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVFRCSS*AIISMS
Trigger: AGACATGGAAATAATCGCCAAGGAGGAGCAGCGAAA...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
3UTR-3UTR CAA 90 bp ATCAGCCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGCAAGCTCCCGTTTGGTaGGTTCCCAAGTTGAAAACT +
Preference number: 3 (lower is better)
Translates to: ISPRRPMVQFEVIFLLFGQAPVW*VPKLKT
Trigger: AGTTTTCAACTTGGGAACCAACCAAACGGGAGCTTG...CCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
3UTR TCA 72 bp CCACAGAGCCAACAGTGTTTACTCCCTGGCTGTCTATaGAAACATCTGCCCACCGCTGAGACAGATGATCCT +
Preference number: 3 (lower is better)
Translates to: PQSQQCLLPGCL*KHLPTAETDDP
Trigger: AGGATCATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACTGTTGGCTCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 72 bp TCTGTCCCGCACACTACACCTCTGTGTCCAGCTTACTaGTTTCATGGACCCATAATCTTACAGCAGGTAGGG +
Preference number: 3 (lower is better)
Translates to: SVPHTTPLCPAY*FHGPIILQQVG
Trigger: CCCTACCTGCTGTAAGATTATGGGTCCATGAAAGCAGTAAGCTGGACACAGAGGTGTAGTGTGCGGGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 72 bp GTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTaGTTCAGCAGTTCAAGCTCCCGTTTGGTTGGTTCC +
Preference number: 3 (lower is better)
Translates to: VQFEVIFLLFGL*FSSSSSRLVGS
Trigger: GGAACCAACCAAACGGGAGCTTGAACTGCTGAAGCACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
3UTR CCA 72 bp GCACACTACACCTCTGTGTCCAGCTTACTGCTTTCATaGACCCATAATCTTACAGCAGGTAGGGGCCTTTCC +
Preference number: 3 (lower is better)
Translates to: AHYTSVSSLLLS*THNLTAGRGLS
Trigger: GGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATGAAAGCAGTAAGCTGGACACAGAGGTGTAGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTAGCAGAACAGACACGCTaGAAAACGCGACGTAGTGTC +
Preference number: 3 (lower is better)
Translates to: AQSRCHFTATTPESTPNVAEQTR*KTRRSV
Trigger: GACACTACGTCGCGTTTTCAAGCGTGTCTGTTCTGC...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 72 bp AACAGTGTTTACTCCCTGGCTGTCTATGAAAACATCTaGCCACCGCTGAGACAGATGATCCTGTTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: NSVYSLAVYENI*PPLRQMILFLQ
Trigger: CTGCAGGAACAGGATCATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTCAGCCCGAGACACACTaGCTTCATAAACTGTATTTC +
Preference number: 3 (lower is better)
Translates to: LVPTSFSMACELRIGFTFQPETH*LHKLYF
Trigger: GAAATACAGTTTATGAAGCAAGTGTGTCTCGGGCTG...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR GCA 72 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTaGCACCACGCCCGAAAGTACACCAAATGTAAAGCA +
Preference number: 3 (lower is better)
Translates to: ALLTSSITVSFY*HHARKYTKCKA
Trigger: TGCTTTACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGGTGGTCAGATGCACTTaGTCACAATGTACACCTACA +
Preference number: 3 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGVVRCT*SQCTPT
Trigger: TGTAGGTGTACATTGTGACAAAGTGCATCTGACCAC...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR-3UTR CAA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATAAGCAAGACTCGCTCTaGAGACTAAAGGAGAAGTTA +
Preference number: 3 (lower is better)
Translates to: PTSFSMACELRIGFTFLNKQDSL*RLKEKL
Trigger: TAACTTCTCCTTTAGTCTCAAGAGCGAGTCTTGCTT...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTACGTCCAGGGCCGCGATaGGGAACTCGTGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVRPGPR*GTRGRP
Trigger: AGGACGCCCACGAGTTCCTCATCGCGGCCCTGGACG...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCGGCCCTGCAGTGCCGTaGCCCGGGGCTGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSGPAVP*PGAGTA
Trigger: GGCAGTTCCAGCCCCGGGCCACGGCACTGCAGGGCC...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537526.6
CDS-3UTR TCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAGGTCACTCTGTGCTGTaGGGCCCCCGTTGCACCCCC +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPGHSVL*GPRCTP
Trigger: GGGGGTGCAACGGGGGCCTCACAGCACAGAGTGACC...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAGGACAAAGATGGGGCTaGGCGATCGCCGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVGQRWG*AIAEGR
Trigger: CCTCCCCTCGGCGATCGCGCAGCCCCATCTTTGTCC...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR CCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTACGCGACCAACACCCTTaGCTGCCAGGCAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVRDQHP*LPGSGS
Trigger: GCTACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCG...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAGGCAACCGCTGCACTTaGTCTTGGCGCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVGNRCT*SWRCCP
Trigger: TGGGCAGCAGCGCCAAGATCAAGTGCAGCGGTTGCC...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCGCCGCCGCCTCCTGTaGGCAGCTCTTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLRRRLL*AALQQQ
Trigger: CTGCTGCTGAAGAGCTGCTCACAGGAGGCGGCGGCG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAAGCTCGGGCCCTGCAGTaGCGTGGCCCGGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKARALQ*RGPGLE
Trigger: TTCCAGCCCCGGGCCACGGCACTGCAGGGCCCGAGC...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537526.6
CDS-3UTR CCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCACGCAGAAGTGGCGTGTaGGTCAGGGCCTGCACGATG +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPRRSGV*VRACTM
Trigger: CATCGTGCAGGCCCTGACCCACACGCCACTTCTGCG...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCACATCTGCATGGGAGGTaGTGTCACCAGGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPHLHGR*CHQAGE
Trigger: CTCCCCGGCCTGGTGACACCACCTCCCATGCAGATG...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCATTCCACACCGAGTGCTaGGGAACGCCAGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPFHTEC*GTPGSG
Trigger: ACCGCTGCCTGGCGTTCCCCAGCACTCGGTGTGGAA...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCGCGACCAACACCCTTaGCTGCCAGGCAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLRDQHP*LPGSGS
Trigger: GCTACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCATCCAGTTGTCCACCTTaGAGCTGCCCAGGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPSSCPP*SCPGAS
Trigger: GCTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGA...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR TCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGGGTCACTCTGTGCTGTaGGGCCCCCGTTGCACCCCC +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGGHSVL*GPRCTP
Trigger: GGGGGTGCAACGGGGGCCTCACAGCACAGAGTGACC...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAAACTTGGCCTTGCGCTTaGGGGCCTCAGCCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKTWPCA*GPQPCR
Trigger: GCGGCACGGCTGAGGCCCGCAAGCGCAAGGCCAAGT...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR GCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCCCCCGTTTACCACGTTaGCCTCGCTCCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSPRLPR*PRSLGS
Trigger: TGAGCCCAGGGAGCGAGGGCAACGTGGTAAACGGGG...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCCCCGTTTACCACGTTaGCCTCGCTCCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLPRLPR*PRSLGS
Trigger: TGAGCCCAGGGAGCGAGGGCAACGTGGTAAACGGGG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCCCTTTCCACACCGAGTaGTGGGGAACGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSPFHTE*WGTPGS
Trigger: GCTGCCTGGCGTTCCCCAGCACTCGGTGTGGAAAGG...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTACAACTCTCCTCCGCTaGGCCCACTGCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLTTLLR*AHCQPP
Trigger: TGGTGGCTGGCAGTGGGCGCAGCGGAGGAGAGTTGT...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAGCAGACGAGACAAGATaGAGGCTCCACCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVADETR*RLHQRP
Trigger: TGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGC...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGGCCTCCCCGTCCGTGTaGTCCATCCCGACCCGATGG +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGASPSV*SIPTRW
Trigger: CCATCGGGTCGGGATGGACCACACGGACGGGGAGGC...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAGTAGTCCCAGCTACTTaGGAGGCTGCGGCACGAGAA +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVVVPAT*EAAARE
Trigger: TTCTCGTGCCGCAGCCTCCCAAGTAGCTGGGACTAC...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTGGCAGATACAGGACTTaGCCTGGCTCGGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLGRYRT*PGSGPA
Trigger: TGCAGGGCCCGAGCCAGGCCAAGTCCTGTATCTGCC...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537526.6
CDS-3UTR TCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAAGGACACATACGTGGTaGTCTTCCGCCGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPRTHTW*SSAAAW
Trigger: CCAAGCTGCGGCGGAAGATCACCACGTATGTGTCCT...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAGACAGACACACCGTATaGGCTGCAGCACAACTCTCC +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVDRHTV*AAAQLS
Trigger: GGAGAGTTGTGCTGCAGCTCATACGGTGTGTCTGTC...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAGCAGACGAGACAAGATaGAGGCTCCACCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPADETR*RLHQRP
Trigger: TGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGC...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTCTGCCTGGTAGGCGCTaGCCCCGGCCGCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LVPTSFSMACELRIGFTFLPGRR*PRPQAG
Trigger: CCCAGCTTGCGGCCGGGGGCAGCGCCTACCAGGCAG...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537526.6
CDS-3UTR GCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGGCTCGGGCCCTGCAGTaGCGTGGCCCGGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLAARALQ*RGPGLE
Trigger: TTCCAGCCCCGGGCCACGGCACTGCAGGGCCCGAGC...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGTGCAGGGCCCCCGGTTaGCGTAACCTGGCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVCRAPG*RNLARA
Trigger: GGCCCGAGCCAGGTTACGGCAACCGGGGGCCCTGCA...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGCCAGCTCGGCGTCCATaGCCTCGCCCTCGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKPARRP*PRPRAL
Trigger: CAGAGCCCGAGGGCGAGGCCATGGACGCCGAGCTGG...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR CCA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGGCCGTGGCCCGGGGCTaGAACTGCCTGCCAACTGCC +
Preference number: 4 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVAVARG*NCLPTA
Trigger: GGCAGTTGGCAGGCAGTTCCAGCCCCGGGCCACGGC...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
3UTR CAA 72 bp GCCAGGCAGCGGTCACTCTGTGCTGTGAGGCCCCCGTaGCACCCCCATGTCATGACACAAGAGATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ARQRSLCAVRPP*HPHVMTQEMFW
Trigger: CCAGAACATCTCTTGTGTCATGACATGGGGGTGCAACGGGGGCCTCACAGCACAGAGTGACCGCTGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAATGTGTTCCCAAGGTTaGTCAGCCCACGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVMCSQG*SAHADL
Trigger: TAGGTCTGCGTGGGCTGATCAACCTTGGGAACACAT...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGCGTCCAGGGCCGCGATaGGGAACTCGTGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKRPGPR*GTRGRP
Trigger: AGGACGCCCACGAGTTCCTCATCGCGGCCCTGGACG...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCGGCACGAGAACTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSGTRTA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAGTTCTCGTGCC...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCGGCACGAGAACTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTGTRTA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAGTTCTCGTGCC...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCGGTGGGTGGATCGCCTaGGGTCAGGAGTTTGAGACA +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSGGWIA*GQEFET
Trigger: TGTCTCAAACTCCTGACCTCAGGCGATCCACCCACC...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGCGCCGCCGCCTCCTGTaGGCAGCTCTTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKRRRLL*AALQQQ
Trigger: CTGCTGCTGAAGAGCTGCTCACAGGAGGCGGCGGCG...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAATGGCCCGCAGGTTCTaGTTCCAGTTGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPMARRF*FQLSTL
Trigger: CAAGGTGGACAACTGGAAGCAGAACCTGCGGGCCAT...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR GCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAAGCAGCGGTCACTCTGTaGTGTGAGGCCCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKAAVTL*CEAPVA
Trigger: TGCAACGGGGGCCTCACAGCACAGAGTGACCGCTGC...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTGCAGTGAGTAGCAGCTaGCACTGTCACTACCCCCTC +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLAVSSS*HCHYPL
Trigger: GAGGGGGTAGTGACAGTGGCAGCTGCTACTCACTGC...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGCGCCGGCCTGAGCTCTaGCGCAAAGAGGCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLARRPEL*RKEAGR
Trigger: TCGCCCCGCCTCTTTGCGGCAGAGCTCAGGCCGGCG...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTACGTACATCAGATCAATaGCCAGGTTGTGCCGCTTCG +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVRTSDQ*PGCAAS
Trigger: CGAAGCGGCACAACCTGGCCATTGATCTGATGTACG...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAAGAAGTCCCGCAGAAGTaGCGTGTGGGTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKEVPQK*RVGQGL
Trigger: CAGGCCCTGACCCACACGCCACTTCTGCGGGACTTC...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCAGACCAGACAGGAGCTaGGGCTCTGCATCTCACAGC +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTRPDRS*GSASHS
Trigger: GCTGTGAGATGCAGAGCCCCAGCTCCTGTCTGGTCT...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCGTGGTTCCCGACACGTaGCTTTCCCCGTTTACCACG +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSVVPDT*LSPFTT
Trigger: CGTGGTAAACGGGGAAAGCCACGTGTCGGGAACCAC...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGGGGGCCACATCTGCATaGGAGGTGGTGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGGATSA*EVVSPG
Trigger: GCCTGGTGACACCACCTCCCATGCAGATGTGGCCCC...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCAGGAATGCAGCCTGTTaGGGTGGACGCCACAGACAT +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSRNAAC*GGRHRH
Trigger: ATGTCTGTGGCGTCCACCTCAACAGGCTGCATTCCT...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTAACTTATACGGGATGTaGGGGGACCGGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLNLYGM*GDRCPE
Trigger: CTCTGGACACCGGTCCCCTCACATCCCGTATAAGTT...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGCGTCCAGGGCCGCGATaGGGAACTCGTGGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLARPGPR*GTRGRP
Trigger: AGGACGCCCACGAGTTCCTCATCGCGGCCCTGGACG...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAACTTGTTGTCATTGTTaGGACTGTCCGTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVTCCHC*DCPWAA
Trigger: AGCAGCCCACGGACAGTCTCAACAATGACAACAAGT...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCAAGAGATGTTCTGGTaGCGGGTGTACGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLQEMFW*RVYAAP
Trigger: AGGAGCAGCGTACACCCGTCACCAGAACATCTCTTG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCACTTCCACGTGCAGCTTaGTGCTGTTACCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPLPRAA*CCYLQN
Trigger: GTTCTGCAGGTAACAGCATCAAGCTGCACGTGGAAG...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCGACAGACACACCGTATaGGCTGCAGCACAACTCTCC +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTDRHTV*AAAQLS
Trigger: GGAGAGTTGTGCTGCAGCTCATACGGTGTGTCTGTC...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTCCCTGGCTGTCTATaGAAACATCTGCCCACCGCT +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTLPGCL*KHLPTA
Trigger: AGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAG...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCTTCCACACTGAGCAGTaGGTAGCAGCTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTFHTEQ*VAAATV
Trigger: GACAGTGGCAGCTGCTACTCACTGCTCAGTGTGGAA...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTACTGAGGTCAGGAGTTTaGGACATGGTGAAACCCCAT +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVLRSGV*DMVKPH
Trigger: ATGGGGTTTCACCATGTCTCAAACTCCTGACCTCAG...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGCTTCCTGGGAGGCACTaGAAGGCCAGCCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGLPGRH*KASQHL
Trigger: GAGATGCTGGCTGGCCTTTCAGTGCCTCCCAGGAAG...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCCAGGTGACGTCTGACTaGAACCCGCCTGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSQVTSD*NPPVKI
Trigger: GATCTTCACAGGCGGGTTGCAGTCAGACGTCACCTG...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCAGGTGACGTCTGACTaGAACCCGCCTGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLQVTSD*NPPVKI
Trigger: GATCTTCACAGGCGGGTTGCAGTCAGACGTCACCTG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCCGAAGCTAGGAGGCTaGTTCACAGCCGCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLPKLGG*FTAAEK
Trigger: TTTCTCAGCGGCTGTGAAGCAGCCTCCTAGCTTCGG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTACAGGCATCAGGTAACTaGTTAGAACGGCAATGCCAC +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVQASGN*LERQCH
Trigger: GTGGCATTGCCGTTCTAAGCAGTTACCTGATGCCTG...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp ATCAGCCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGGAACTGCCTGCCAACTaGCTGGTAGGCGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: ISPRRPMVQFEVIFLLFGELPAN*LVGAAP
Trigger: GGGGGCAGCGCCTACCAGGCAGTTGGCAGGCAGTTC...CCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGCCTTTGCAGTGTCGGTaGAGCACGTCCAGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVPLQCR*STSRAA
Trigger: CGCGGCCCTGGACGTGCTCCACCGACACTGCAAAGG...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGCCGGTTGCCGTAACCTaGCTCGGGCCCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLAPVAVT*LGPCSA
Trigger: GGCACTGCAGGGCCCGAGCCAGGTTACGGCAACCGG...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGCGCCTCCCGGGACCCTaGCGGCTAGACGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLARLPGP*RLDVPC
Trigger: ACAGGGAACGTCTAGCCGCCAGGGTCCCGGGAGGCG...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAAAGGACACATACGTGGTaGTCTTCCGCCGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKRTHTW*SSAAAW
Trigger: CCAAGCTGCGGCGGAAGATCACCACGTATGTGTCCT...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCATGGCATCGTCACACTTaGACCACTGGTCTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPWHRHT*TTGLCA
Trigger: AGCACAAAGACCAGTGGTTCAAGTGTGACGATGCCA...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTGCTTCACAGCCGCTaGGAAAATGGAGGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTLLHSR*ENGGEE
Trigger: CTCTTCACCTCCATTTTCTCAGCGGCTGTGAAGCAG...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAATCAATGGCCAGGTTGTaGCGCTTCGCCTTCGCATGC +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKSMARL*RFAFAC
Trigger: GCATGCGAAGGCGAAGCGGCACAACCTGGCCATTGA...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAGACACCGGCAGACACTaGATTTACTCCAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPDTGRH*IYSRLR
Trigger: TCTCAGTCTGGAGTAAATGCAGTGTCTGCCGGTGTC...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACGGTGTCATTTTACTaGCACCACGCCCGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPTVSFY*HHARKY
Trigger: GTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGT...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCATCTGCGGGCTGTGATTaGCAAGTCCTGTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPSAGCD*QVLCFP
Trigger: TGGAAAACACAGGACTTGGCAATCACAGCCCGCAGA...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTGAACTGCCTGCCAACTaGCTGGTAGGCGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LVPTSFSMACELRIGFTFELPAN*LVGAAP
Trigger: GGGGGCAGCGCCTACCAGGCAGTTGGCAGGCAGTTC...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537526.6
CDS-3UTR CCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTGAGGCCGGACAAAGATaGGGCTGCGCGATCGCCGAG +
Preference number: 4 (lower is better)
Translates to: LVPTSFSMACELRIGFTFEAGQR*GCAIAE
Trigger: CTCGGCGATCGCGCAGCCCCATCTTTGTCCGGCCTC...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR CCA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGCGCAGAAGTGGCGTGTaGGTCAGGGCCTGCACGATG +
Preference number: 4 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVRRSGV*VRACTM
Trigger: CATCGTGCAGGCCCTGACCCACACGCCACTTCTGCG...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGGAAGTCCCGCAGAAGTaGCGTGTGGGTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKEVPQK*RVGQGL
Trigger: CAGGCCCTGACCCACACGCCACTTCTGCGGGACTTC...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAAAGACCAGACAGGAGCTaGGGCTCTGCATCTCACAGC +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKRPDRS*GSASHS
Trigger: GCTGTGAGATGCAGAGCCCCAGCTCCTGTCTGGTCT...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGGCTAGGTGCCTCGCGTaGGTCCACACCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLAARCLA*VHTRCS
Trigger: GCTGCACCTGGTGTGGACCCACGCGAGGCACCTAGC...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCTGCAGTTGCAGTGGTTaGGGTTGTTGGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTCSCSG*GCWPSS
Trigger: GGAAGAAGGCCAACAACCCCAACCACTGCAACTGCA...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAATACAAAAATTAGCCTaGCGTGGTGGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVIQKLA*RGGACL
Trigger: CAGGCATGCACCACCACGCCAGGCTAATTTTTGTAT...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAATGGGGCGTCCCAAGGTaGCAAGCCTTCATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKWGVPR*QAFMKA
Trigger: TGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCA...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGTCTCTTCCAGAGGACTaGGGAGGCGGGGGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLASLPED*GGGGVL
Trigger: CAGCACGCCCCCGCCTCCCCAGTCCTCTGGAAGAGA...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCGGTTGGTTCCCAAGTTaGAAACTTCTCTCCAACGCC +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTGWFPS*KLLSNA
Trigger: GGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACC...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGGGCAACCGCTGCACTTaGTCTTGGCGCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLAGNRCT*SWRCCP
Trigger: TGGGCAGCAGCGCCAAGATCAAGTGCAGCGGTTGCC...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCTACTCCAGACTGAGATaGCAGACACACCGTATGAGC +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSYSRLR*QTHRMS
Trigger: GCTCATACGGTGTGTCTGTCATCTCAGTCTGGAGTA...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTGTTCCTGCAGGACTaGAGAAGCCTCAGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTLFLQD*RSLSSD
Trigger: ATCTGAACTGAGGCTTCTTCAGTCCTGCAGGAACAG...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGCTCCCTGGCTGTCTATaGAAACATCTGCCCACCGCT +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGLPGCL*KHLPTA
Trigger: AGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAG...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGTTCCACACTGAGCAGTaGGTAGCAGCTGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGFHTEQ*VAAATV
Trigger: GACAGTGGCAGCTGCTACTCACTGCTCAGTGTGGAA...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTATTGAAGCTGCCCAGGTaGGAGCAGCCCGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: AQSRCHFTATTPESTPNVLKLPR*EQPGGA
Trigger: AGCGCCGCCGGGCTGCTCGCACCTGGGCAGCTTCAA...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR GCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCCTCCTTTTCGGGTTGTaGTTCAGCAGTTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSLLFGL*FSSSSS
Trigger: GGAGCTTGAACTGCTGAAGCACAACCCGAAAAGGAG...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAACCGAAGCTAGGAGGCTaGTTCACAGCCGCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKPKLGG*FTAAEK
Trigger: TTTCTCAGCGGCTGTGAAGCAGCCTCCTAGCTTCGG...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTACTTGATGCTGTTACCTaGAGAACAGACACGCTTGAA +
Preference number: 4 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVLDAVT*RTDTLE
Trigger: TTCAAGCGTGTCTGTTCTGCAGGTAACAGCATCAAG...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCCGAGATGCTTCCACGTaGAGCTTGATGCTGTTACCT +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSRDAST*SLMLLP
Trigger: AGGTAACAGCATCAAGCTGCACGTGGAAGCATCTCG...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCGAGATGCTTCCACGTaGAGCTTGATGCTGTTACCT +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLRDAST*SLMLLP
Trigger: AGGTAACAGCATCAAGCTGCACGTGGAAGCATCTCG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTACGGTGTCATTTTACTaGCACCACGCCCGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLTVSFY*HHARKY
Trigger: GTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGT...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCTCTGCGGGCTGTGATTaGCAAGTCCTGTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTSAGCD*QVLCFP
Trigger: TGGAAAACACAGGACTTGGCAATCACAGCCCGCAGA...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCTGCTTAGAACGGCAATaGCACAGTGGAATAAGGGGG +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTCLERQ*HSGIRG
Trigger: CCCCCTTATTCCACTGTGGCATTGCCGTTCTAAGCA...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGCTGCCTGGTAGGCGCTaGCCCCGGCCGCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKLPGRR*PRPQAG
Trigger: CCCAGCTTGCGGCCGGGGGCAGCGCCTACCAGGCAG...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGGAAGTCCCGCAGAAGTaGCGTGTGGGTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLAEVPQK*RVGQGL
Trigger: CAGGCCCTGACCCACACGCCACTTCTGCGGGACTTC...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATGCTAGGTGCCTCGCGTaGGTCCACACCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDARCLA*VHTRCS
Trigger: GCTGCACCTGGTGTGGACCCACGCGAGGCACCTAGC...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCCTTTGCAGTGTCGGTaGAGCACGTCCAGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMPLQCR*STSRAA
Trigger: CGCGGCCCTGGACGTGCTCCACCGACACTGCAAAGG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAGCGGTAGCCAGGCAATaGGATAGAAGGCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPAVARQ*DRRQRK
Trigger: TTTTCTTTGCCTTCTATCCCATTGCCTGGCTACCGC...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCAATGAACAGAGCACGTaGGCAAGAAACCGCATCCCT +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSNEQST*ARNRIP
Trigger: AGGGATGCGGTTTCTTGCCCACGTGCTCTGTTCATT...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCAGCTCACAATCCTGTaGGCCAACTTCAGTCAACTC +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLQLTIL*ANFSQL
Trigger: GAGTTGACTGAAGTTGGCCCACAGGATTGTGAGCTG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGGGCCCTGCAGTGCCGTaGCCCGGGGCTGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKGPAVP*PGAGTA
Trigger: GGCAGTTCCAGCCCCGGGCCACGGCACTGCAGGGCC...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGGGCAACCGCTGCACTTaGTCTTGGCGCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMGNRCT*SWRCCP
Trigger: TGGGCAGCAGCGCCAAGATCAAGTGCAGCGGTTGCC...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAAGGGAGGATCACTTTGTaGGGCTTGCCAATGCATTGC +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKGRITL*GLPMHC
Trigger: GCAATGCATTGGCAAGCCTCACAAAGTGATCCTCCC...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCTGAGAAAATGGAGGTaGAGAGTTCCATACTCTCCG +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLLRKWR*RVPYSP
Trigger: CGGAGAGTATGGAACTCTTCACCTCCATTTTCTCAG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAACTTCCACGTGCAGCTTaGTGCTGTTACCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKLPRAA*CCYLQN
Trigger: GTTCTGCAGGTAACAGCATCAAGCTGCACGTGGAAG...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTGCATTTACTCCAGACTaGGATGACAGACACACCGTA +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLAFTPD*DDRHTV
Trigger: TACGGTGTGTCTGTCATCTCAGTCTGGAGTAAATGC...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAATGGTTCTGCGGGCTGTaGTTGCCAAGTCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKWFCGL*LPSPVF
Trigger: AAACACAGGACTTGGCAATCACAGCCCGCAGAACCA...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTACATGGGACCATTTCTaGAAATCTCGGCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLTWDHF*KSRPIS
Trigger: AGAGATGGGCCGAGATTTTCAGAAATGGTCCCATGT...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTGGTGGCAAGCCTTCATaGAGGCACTGCCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LVPTSFSMACELRIGFTFGGKPS*RHCPAH
Trigger: GTGAGCTGGGCAGTGCCTTCATGAAGGCTTGCCACC...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGCAACGGGAGGTTTCCTaGATTTCACAGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGQREVS*ISQPDG
Trigger: CCCATCTGGCTGTGAAATTCAGGAAACCTCCCGTTG...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAATTTTAACACTGCTGTaGATGTGCTGGGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPILTLL*MCWGHQ
Trigger: TTGGTGACCCCAGCACATTCACAGCAGTGTTAAAAT...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTCTTCCTGGGAGGCACTaGAAGGCCAGCCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LVPTSFSMACELRIGFTFLPGRH*KASQHL
Trigger: GAGATGCTGGCTGGCCTTTCAGTGCCTCCCAGGAAG...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCAAAGAGGCGGGGCGATaGGCTGGAGCGCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFKEAGR*AGAPQV
Trigger: GACCTGCGGCGCTCCAGCTCATCGCCCCGCCTCTTT...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTCAATGGCCAGGTTGTaGCGCTTCGCCTTCGCATGC +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKSMARL*RFAFAC
Trigger: GCATGCGAAGGCGAAGCGGCACAACCTGGCCATTGA...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATGCAGCGGTCACTCTGTaGTGTGAGGCCCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDAAVTL*CEAPVA
Trigger: TGCAACGGGGGCCTCACAGCACAGAGTGACCGCTGC...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGACAACTCTCCTCCGCTaGGCCCACTGCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMTTLLR*AHCQPP
Trigger: TGGTGGCTGGCAGTGGGCGCAGCGGAGGAGAGTTGT...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATACCAACACCCTTGGCTaGCAGGCAGCGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDTNTLG*QAAVAR
Trigger: CCTGGCTACCGCTGCCTGGCAGCCAAGGGTGTTGGT...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGCCTCAGTTCAGATGCTaGTGGGGCTCCTGGGACAAG +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKPQFRC*WGSWDK
Trigger: CTTGTCCCAGGAGCCCCAGCAGCATCTGAACTGAGG...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGCCAGGGAGGCTGCAGTaGTCACCACGAAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGPGRLQ*SPRSPG
Trigger: ACCTGGGCTTCGTGGTGAGCACTGCAGCCTCCCTGG...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCCAGGGAGGCTGCAGTaGTCACCACGAAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMPGRLQ*SPRSPG
Trigger: ACCTGGGCTTCGTGGTGAGCACTGCAGCCTCCCTGG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp ATCAGCCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTGCAGCCTGTTGAGGTaGACGCCACAGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: ISPRRPMVQFEVIFLLFGCSLLR*TPQTWQ
Trigger: CTGCCATGTCTGTGGCGTCCACCTCAACAGGCTGCA...CCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGCGTACATCAGATCAATaGCCAGGTTGTGCCGCTTCG +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGRTSDQ*PGCAAS
Trigger: CGAAGCGGCACAACCTGGCCATTGATCTGATGTACG...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCATTCGCTGCTCCTCCTTaGCGATTATTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPFAAPP*RLFPCL
Trigger: AAGACATGGAAATAATCGCCAAGGAGGAGCAGCGAA...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGCGCAGAAGTGGCGTGTaGGTCAGGGCCTGCACGATG +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGRRSGV*VRACTM
Trigger: CATCGTGCAGGCCCTGACCCACACGCCACTTCTGCG...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp ATCAGCCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGAGACCAGACAGGAGCTaGGGCTCTGCATCTCACAGC +
Preference number: 4 (lower is better)
Translates to: ISPRRPMVQFEVIFLLFGRPDRS*GSASHS
Trigger: GCTGTGAGATGCAGAGCCCCAGCTCCTGTCTGGTCT...CCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGGTGGTTCCCGACACGTaGCTTTCCCCGTTTACCACG +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKVVPDT*LSPFTT
Trigger: CGTGGTAAACGGGGAAAGCCACGTGTCGGGAACCAC...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp ATCAGCCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGGTGGTTCCCGACACGTaGCTTTCCCCGTTTACCACG +
Preference number: 4 (lower is better)
Translates to: ISPRRPMVQFEVIFLLFGVVPDT*LSPFTT
Trigger: CGTGGTAAACGGGGAAAGCCACGTGTCGGGAACCAC...CCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGTTCCACACCGAGTGCTaGGGAACGCCAGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMFHTEC*GTPGSG
Trigger: ACCGCTGCCTGGCGTTCCCCAGCACTCGGTGTGGAA...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCGCGGTAGCCAGGCAATaGGATAGAAGGCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTAVARQ*DRRQRK
Trigger: TTTTCTTTGCCTTCTATCCCATTGCCTGGCTACCGC...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAACCACTCACTCCAGCCTaGGCAACAAACTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKPLTPA*ATNSIS
Trigger: TGAGATGGAGTTTGTTGCCCAGGCTGGAGTGAGTGG...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCATACAAAAATTAGCCTaGCGTGGTGGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSIQKLA*RGGACL
Trigger: CAGGCATGCACCACCACGCCAGGCTAATTTTTGTAT...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTGGGGCGTCCCAAGGTaGCAAGCCTTCATGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKWGVPR*QAFMKA
Trigger: TGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCA...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATGCCGTGGCCCGGGGCTaGAACTGCCTGCCAACTGCC +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNAVARG*NCLPTA
Trigger: GGCAGTTGGCAGGCAGTTCCAGCCCCGGGCCACGGC...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537526.6
CDS-3UTR CCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATATACAGGACTTGGCCTaGCTCGGGCCCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDIQDLA*LGPCSA
Trigger: GGCACTGCAGGGCCCGAGCCAGGCCAAGTCCTGTAT...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537526.6
CDS-3UTR CCA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGGGGGCGTGCTGCGGTTaGGCGGCGCGAGACGTCAGT +
Preference number: 4 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKGACCG*AARDVS
Trigger: ACTGACGTCTCGCGCCGCCCAACCGCAGCACGCCCC...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGAGGAATGCAGCCTGTTaGGGTGGACGCCACAGACAT +
Preference number: 4 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVRNAAC*GGRHRH
Trigger: ATGTCTGTGGCGTCCACCTCAACAGGCTGCATTCCT...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp ATCAGCCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGAACTTATACGGGATGTaGGGGGACCGGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ISPRRPMVQFEVIFLLFGNLYGM*GDRCPE
Trigger: CTCTGGACACCGGTCCCCTCACATCCCGTATAAGTT...CCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTTCAAATCGTTTGAGATaGAAACAGGCTACGATGGGC +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLSNRLR*KQATMG
Trigger: GCCCATCGTAGCCTGTTTTCATCTCAAACGATTTGA...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGAGGACACATACGTGGTaGTCTTCCGCCGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLARTHTW*SSAAAW
Trigger: CCAAGCTGCGGCGGAAGATCACCACGTATGTGTCCT...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGCTCTTTCAGCTCTGCTaGCAAGCTCAATCACGGTGT +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGLFQLC*QAQSRC
Trigger: ACACCGTGATTGAGCTTGTCAGCAGAGCTGAAAGAG...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGCGGTTTGCGCCGGCCTaGGCTCTGCCGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKRFAPA*ALPQRG
Trigger: GCCTCTTTGCGGCAGAGCTCAGGCCGGCGCAAACCG...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGTCAATGGCCAGGTTGTaGCGCTTCGCCTTCGCATGC +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLASMARL*RFAFAC
Trigger: GCATGCGAAGGCGAAGCGGCACAACCTGGCCATTGA...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCTTCCAAGCTTTTCGCTaGTCCTCCTTGGCGATTATT +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSFQAFR*SSLAII
Trigger: AATAATCGCCAAGGAGGAGCAGCGAAAAGCTTGGAA...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCCTGTGTCCAGCTTACTaGTTTCATGGACCCATAATC +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSLCPAY*FHGPII
Trigger: GATTATGGGTCCATGAAAGCAGTAAGCTGGACACAG...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTGCAGTGAGTAGCAGCTaGCACTGTCACTACCCCCTC +
Preference number: 4 (lower is better)
Translates to: LVPTSFSMACELRIGFTFAVSSS*HCHYPL
Trigger: GAGGGGGTAGTGACAGTGGCAGCTGCTACTCACTGC...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTGCCAGAAAGCCTTCTaGACTCCGCAAGACACCCCA +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKCQKAF*TPQDTP
Trigger: TGGGGTGTCTTGCGGAGTGCAGAAGGCTTTCTGGCA...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTTTCGCTGCTCCTCCTTaGCGATTATTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLFAAPP*RLFPCL
Trigger: AAGACATGGAAATAATCGCCAAGGAGGAGCAGCGAA...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCGTTCAAGCTCCCGTTTaGTTGGTTCCCAAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSVQAPV*LVPKLK
Trigger: TTTCAACTTGGGAACCAACCAAACGGGAGCTTGAAC...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGATGTGTTCCCAAGGTTaGTCAGCCCACGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKMCSQG*SAHADL
Trigger: TAGGTCTGCGTGGGCTGATCAACCTTGGGAACACAT...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGATGTGTTCCCAAGGTTaGTCAGCCCACGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVMCSQG*SAHADL
Trigger: TAGGTCTGCGTGGGCTGATCAACCTTGGGAACACAT...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGCAGAACAGACACGCTTaGAAACGCGACGTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKQNRHA*KRDVVS
Trigger: GGACACTACGTCGCGTTTTCAAGCGTGTCTGTTCTG...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTAGGTGGCAAGCCTTCATaGAGGCACTGCCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: AQSRCHFTATTPESTPNVGGKPS*RHCPAH
Trigger: GTGAGCTGGGCAGTGCCTTCATGAAGGCTTGCCACC...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATTGCGGGCCTCAGCCGTaGCGCTCCACACGAAGCACT +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNCGPQP*RSTRST
Trigger: AGTGCTTCGTGTGGAGCGGCACGGCTGAGGCCCGCA...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR GCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCTGTGAGGCTTGCCAATaGATTGCCTTTGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSCEACQ*IAFVFL
Trigger: CAGAAAAACAAAGGCAATGCATTGGCAAGCCTCACA...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCTCACTTTGTGAGGCTTaGCAATGCATTGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSSLCEA*QCIAFV
Trigger: AACAAAGGCAATGCATTGGCAAGCCTCACAAAGTGA...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTACACACCGTATGAGCTaGAGCACAACTCTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LVPTSFSMACELRIGFTFTHRMS*STTLLR
Trigger: GCGGAGGAGAGTTGTGCTGCAGCTCATACGGTGTGT...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGAAGCCTCAGTTCAGATaGTGCTGGGGCTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMKPQFR*CWGSWD
Trigger: GTCCCAGGAGCCCCAGCAGCATCTGAACTGAGGCTT...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGGTCTATGAAAACATCTaGCCACCGCTGAGACAGATG +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGVYENI*PPLRQM
Trigger: CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGAC...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATGGGGCTGGAACTGCCTaGCAACTGCCTGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNGAGTA*QLPGRR
Trigger: GCGCCTACCAGGCAGTTGGCAGGCAGTTCCAGCCCC...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537526.6
CDS-3UTR GCA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGGGGGCTGGAACTGCCTaGCAACTGCCTGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKGAGTA*QLPGRR
Trigger: GCGCCTACCAGGCAGTTGGCAGGCAGTTCCAGCCCC...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGTGCAGCCTGTTGAGGTaGACGCCACAGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMCSLLR*TPQTWQ
Trigger: CTGCCATGTCTGTGGCGTCCACCTCAACAGGCTGCA...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGTGCAGCCTGTTGAGGTaGACGCCACAGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGCSLLR*TPQTWQ
Trigger: CTGCCATGTCTGTGGCGTCCACCTCAACAGGCTGCA...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATGCTAGGTGCCTCGCGTaGGTCCACACCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNARCLA*VHTRCS
Trigger: GCTGCACCTGGTGTGGACCCACGCGAGGCACCTAGC...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATCCTTTGCAGTGTCGGTaGAGCACGTCCAGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNPLQCR*STSRAA
Trigger: CGCGGCCCTGGACGTGCTCCACCGACACTGCAAAGG...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTTCTCTGTACTATTTATaGCAGAGACCATACAGCCCA +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLSLYYL*QRPYSP
Trigger: TGGGCTGTATGGTCTCTGCCATAAATAGTACAGAGA...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGGACACCCCAGTAAACTaGGGCGTCCCAAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGDTPVN*GVPRWQ
Trigger: TTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTC...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGGACACCCCAGTAAACTaGGGCGTCCCAAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMDTPVN*GVPRWQ
Trigger: TTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTC...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAAATTTCACAGCCAGATaGGGAGCTAAAAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: GRRDKMQAPPEATPASRPNFTAR*GAKRNS
Trigger: GGAATTTCTTTTAGCTCCCCATCTGGCTGTGAAATT...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGATGTTGCAGTGGTGCTaGCGCTGGAGGGAATGCCCA +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMMLQWC*RWRECP
Trigger: TGGGCATTCCCTCCAGCGCCAGCACCACTGCAACAT...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGATGTTGCAGTGGTGCTaGCGCTGGAGGGAATGCCCA +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGMLQWC*RWRECP
Trigger: TGGGCATTCCCTCCAGCGCCAGCACCACTGCAACAT...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGAGGAATGCAGCCTGTTaGGGTGGACGCCACAGACAT +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMRNAAC*GGRHRH
Trigger: ATGTCTGTGGCGTCCACCTCAACAGGCTGCATTCCT...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAAGCCTTCGCATGCTCGTaGATATGCTTCTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKAFACS*ICFFVK
Trigger: TTTCACAAAGAAGCATATTCACGAGCATGCGAAGGC...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGGGTTGGTTCCCAAGTTaGAAACTTCTCTCCAACGCC +
Preference number: 4 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVGWFPS*KLLSNA
Trigger: GGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACC...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGTGGTGCAGTTCGAGGTaGTCTTTCTCCTTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVWCSSR*SFSFSG
Trigger: ACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCA...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGAACTTATACGGGATGTaGGGGGACCGGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGNLYGM*GDRCPE
Trigger: CTCTGGACACCGGTCCCCTCACATCCCGTATAAGTT...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGACTTGTTGTCATTGTTaGGACTGTCCGTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKTCCHC*DCPWAA
Trigger: AGCAGCCCACGGACAGTCTCAACAATGACAACAAGT...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTCAGAACAGACACGCTTaGAAACGCGACGTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LVPTSFSMACELRIGFTFQNRHA*KRDVVS
Trigger: GGACACTACGTCGCGTTTTCAAGCGTGTCTGTTCTG...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCACAGAAAACAGTAGATaGCTCCGTACATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTTENSR*LRTSDQ
Trigger: TTGATCTGATGTACGGAGGCATCTACTGTTTTCTGT...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp ATCAGCCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGCATTGTCATCACCTTTaGAGTGTCGGTGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: ISPRRPMVQFEVIFLLFGHCHHL*SVGGAR
Trigger: ACGTGCTCCACCGACACTGCAAAGGTGATGACAATG...CCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGCCCCGTTTACCACGTTaGCCTCGCTCCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKPRLPR*PRSLGS
Trigger: TGAGCCCAGGGAGCGAGGGCAACGTGGTAAACGGGG...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATACCAACACCCTTGGCTaGCAGGCAGCGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNTNTLG*QAAVAR
Trigger: CCTGGCTACCGCTGCCTGGCAGCCAAGGGTGTTGGT...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTAAAGCCTCAGTTCAGATaGTGCTGGGGCTCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AQSRCHFTATTPESTPNVKPQFR*CWGSWD
Trigger: GTCCCAGGAGCCCCAGCAGCATCTGAACTGAGGCTT...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGTGCCAGAAAGCCTTCTaGACTCCGCAAGACACCCCA +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGCQKAF*TPQDTP
Trigger: TGGGGTGTCTTGCGGAGTGCAGAAGGCTTTCTGGCA...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGAGCACTGAACCGGTTTaGGCCGGCCTGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKSTEPV*AGLSSA
Trigger: GGCAGAGCTCAGGCCGGCGCAAACCGGTTCAGTGCT...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATGGGGCCACATCTGCATaGGAGGTGGTGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNGATSA*EVVSPG
Trigger: GCCTGGTGACACCACCTCCCATGCAGATGTGGCCCC...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTACAGTGTTTACTCCCTaGCTGTCTATGAAAACATCT +
Preference number: 4 (lower is better)
Translates to: LHSARHPSKLGRPKVASLTVFTP*LSMKTS
Trigger: AGATGTTTTCATAGACAGCCAGGGAGTAAACACTGT...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAACCAAACAGCAGAACTTaGTCACATGGGACCATTTCT +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKPNSRT*SHGTIS
Trigger: AGAAATGGTCCCATGTGACCAAGTTCTGCTGTTTGG...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTGGTGCAGTTCGAGGTaGTCTTTCTCCTTTTCGGGT +
Preference number: 4 (lower is better)
Translates to: LVPTSFSMACELRIGFTFWCSSR*SFSFSG
Trigger: ACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCA...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGTGGCATCGTCACACTTaGACCACTGGTCTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLAWHRHT*TTGLCA
Trigger: AGCACAAAGACCAGTGGTTCAAGTGTGACGATGCCA...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGGGGAGGATCACTTTGTaGGGCTTGCCAATGCATTGC +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGGRITL*GLPMHC
Trigger: GCAATGCATTGGCAAGCCTCACAAAGTGATCCTCCC...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGCTGAGAAAATGGAGGTaGAGAGTTCCATACTCTCCG +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKLRKWR*RVPYSP
Trigger: CGGAGAGTATGGAACTCTTCACCTCCATTTTCTCAG...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCAACGGGAGGTTTCCTaGATTTCACAGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMQREVS*ISQPDG
Trigger: CCCATCTGGCTGTGAAATTCAGGAAACCTCCCGTTG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATTGGGTCCACACCAGGTaGAGCAACTTATACGGGATG +
Preference number: 4 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDWVHTR*SNLYGM
Trigger: CATCCCGTATAAGTTGCTGCACCTGGTGTGGACCCA...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR CAA 72 bp TGCAGCTTGATGCTGTTACCTGCAGAACAGACACGCTaGAAAACGCGACGTAGTGTCCGTACTTCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: CSLMLLPAEQTR*KTRRSVRTSEA
Trigger: AGCTTCGGAAGTACGGACACTACGTCGCGTTTTCAAGCGTGTCTGTTCTGCAGGTAACAGCATCAAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGAGTGTTCAAATCGTTTaGGATGAAAACAGGCTACGA +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGSVQIV*DENRLR
Trigger: TCGTAGCCTGTTTTCATCTCAAACGATTTGAACACT...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGTGGCATCGTCACACTTaGACCACTGGTCTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMWHRHT*TTGLCA
Trigger: AGCACAAAGACCAGTGGTTCAAGTGTGACGATGCCA...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCTCTTTCAGCTCTGCTaGCAAGCTCAATCACGGTGT +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMLFQLC*QAQSRC
Trigger: ACACCGTGATTGAGCTTGTCAGCAGAGCTGAAAGAG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCTGAGGTCAGGAGTTTaGGACATGGTGAAACCCCAT +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMLRSGV*DMVKPH
Trigger: ATGGGGTTTCACCATGTCTCAAACTCCTGACCTCAG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATGGTGGGTGGATCGCCTaGGGTCAGGAGTTTGAGACA +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNGGWIA*GQEFET
Trigger: TGTCTCAAACTCCTGACCTCAGGCGATCCACCCACC...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGACAGAAAACAGTAGATaGCTCCGTACATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGTENSR*LRTSDQ
Trigger: TTGATCTGATGTACGGAGGCATCTACTGTTTTCTGT...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCTCCTTTTCGGGTTGTaGTTCAGCAGTTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMLLFGL*FSSSSS
Trigger: GGAGCTTGAACTGCTGAAGCACAACCCGAAAAGGAG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTATGGGTCCACACCAGGTaGAGCAACTTATACGGGATG +
Preference number: 4 (lower is better)
Translates to: AQSRCHFTATTPESTPNVWVHTR*SNLYGM
Trigger: CATCCCGTATAAGTTGCTGCACCTGGTGTGGACCCA...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGCATTGTCATCACCTTTaGAGTGTCGGTGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGHCHHL*SVGGAR
Trigger: ACGTGCTCCACCGACACTGCAAAGGTGATGACAATG...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCATTGTCATCACCTTTaGAGTGTCGGTGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMHCHHL*SVGGAR
Trigger: ACGTGCTCCACCGACACTGCAAAGGTGATGACAATG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAGGTGACGTCTGACTaGAACCCGCCTGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFQVTSD*NPPVKI
Trigger: GATCTTCACAGGCGGGTTGCAGTCAGACGTCACCTG...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATGACACCGGCAGACACTaGATTTACTCCAGACTGAGA +
Preference number: 4 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDDTGRH*IYSRLR
Trigger: TCTCAGTCTGGAGTAAATGCAGTGTCTGCCGGTGTC...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAAAGCTTACTGCTTTCATaGACCCATAATCTTACAGCA +
Preference number: 4 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKSLLLS*THNLTA
Trigger: TGCTGTAAGATTATGGGTCCATGAAAGCAGTAAGCT...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGCAGCTCACAATCCTGTaGGCCAACTTCAGTCAACTC +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGQLTIL*ANFSQL
Trigger: GAGTTGACTGAAGTTGGCCCACAGGATTGTGAGCTG...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
3UTR CAA 72 bp ATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTaGTGCTTCAGCAGTTCAAGCTCCCGTTTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: MVQFEVIFLLFG*CFSSSSSRLVG
Trigger: ACCAACCAAACGGGAGCTTGAACTGCTGAAGCACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTAGGTTGGTTCCCAAGTTaGAAACTTCTCTCCAACGCC +
Preference number: 4 (lower is better)
Translates to: AQSRCHFTATTPESTPNVGWFPS*KLLSNA
Trigger: GGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACC...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTATGCACCCCCATGTCATaGCACAAGAGATGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: AQSRCHFTATTPESTPNVCTPMS*HKRCSG
Trigger: ACCAGAACATCTCTTGTGTCATGACATGGGGGTGCA...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATGCATTTACTCCAGACTaGGATGACAGACACACCGTA +
Preference number: 4 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDAFTPD*DDRHTV
Trigger: TACGGTGTGTCTGTCATCTCAGTCTGGAGTAAATGC...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTACTGTTCCTGCAGGACTaGAGAAGCCTCAGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: AQSRCHFTATTPESTPNVLFLQD*RSLSSD
Trigger: ATCTGAACTGAGGCTTCTTCAGTCCTGCAGGAACAG...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGAAAAACAACAGAAAATaGACAGAGCACGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKKNNRK*TEHVGK
Trigger: CTTGCCCACGTGCTCTGTTCATTTTCTGTTGTTTTT...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGGCTAAAAGAAATTCCTaGACCCAACGCGTAAATATT +
Preference number: 4 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGAKRNS*TQRVNI
Trigger: AATATTTACGCGTTGGGTTCAGGAATTTCTTTTAGC...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGTTCCAAGCTTTTCGCTaGTCCTCCTTGGCGATTATT +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLAFQAFR*SSLAII
Trigger: AATAATCGCCAAGGAGGAGCAGCGAAAAGCTTGGAA...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCTGGGTCCACACCAGGTaGAGCAACTTATACGGGATG +
Preference number: 4 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFWVHTR*SNLYGM
Trigger: CATCCCGTATAAGTTGCTGCACCTGGTGTGGACCCA...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp ATCAGCCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTCACTTTGTGAGGCTTaGCAATGCATTGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ISPRRPMVQFEVIFLLFGSLCEA*QCIAFV
Trigger: AACAAAGGCAATGCATTGGCAAGCCTCACAAAGTGA...CCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGGTTCAAGCTCCCGTTTaGTTGGTTCCCAAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLAVQAPV*LVPKLK
Trigger: TTTCAACTTGGGAACCAACCAAACGGGAGCTTGAAC...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
3UTR CAA 72 bp GTTTCTAGAAAACCGCGAGATGCTTCCACGTGCAGCTaGATGCTGTTACCTGCAGAACAGACACGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: VSRKPRDASTCS*MLLPAEQTRLK
Trigger: TTTCAAGCGTGTCTGTTCTGCAGGTAACAGCATCAAGCTGCACGTGGAAGCATCTCGCGGTTTTCTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGTCAAATCGTTTGAGATaGAAACAGGCTACGATGGGC +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGSNRLR*KQATMG
Trigger: GCCCATCGTAGCCTGTTTTCATCTCAAACGATTTGA...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCACTTGTTGTCATTGTTaGGACTGTCCGTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFTCCHC*DCPWAA
Trigger: AGCAGCCCACGGACAGTCTCAACAATGACAACAAGT...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATTGGTTCTGCGGGCTGTaGTTGCCAAGTCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNWFCGL*LPSPVF
Trigger: AAACACAGGACTTGGCAATCACAGCCCGCAGAACCA...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGACAGAAAACAGTAGATaGCTCCGTACATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVTENSR*LRTSDQ
Trigger: TTGATCTGATGTACGGAGGCATCTACTGTTTTCTGT...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGTTCCAAGCTTTTCGCTaGTCCTCCTTGGCGATTATT +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGFQAFR*SSLAII
Trigger: AATAATCGCCAAGGAGGAGCAGCGAAAAGCTTGGAA...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTAGTCTATGAAAACATCTaGCCACCGCTGAGACAGATG +
Preference number: 4 (lower is better)
Translates to: AQSRCHFTATTPESTPNVVYENI*PPLRQM
Trigger: CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGAC...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGCGTACATCAGATCAATaGCCAGGTTGTGCCGCTTCG +
Preference number: 4 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKRTSDQ*PGCAAS
Trigger: CGAAGCGGCACAACCTGGCCATTGATCTGATGTACG...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATTGCAGTTGCAGTGGTTaGGGTTGTTGGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNCSCSG*GCWPSS
Trigger: GGAAGAAGGCCAACAACCCCAACCACTGCAACTGCA...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGTGCAGTTGCAGTGGTTaGGGTTGTTGGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKCSCSG*GCWPSS
Trigger: GGAAGAAGGCCAACAACCCCAACCACTGCAACTGCA...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTTCTCAGTGGACAAATaGACAAACCATCTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKFSVDK*TNHLCL
Trigger: CAAACAGAGATGGTTTGTCCATTTGTCCACTGAGAA...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGACAGTGTTTACTCCCTaGCTGTCTATGAAAACATCT +
Preference number: 4 (lower is better)
Translates to: ALLTSSITVSFYCHHARKTVFTP*LSMKTS
Trigger: AGATGTTTTCATAGACAGCCAGGGAGTAAACACTGT...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATTACTCCAGACTGAGATaGCAGACACACCGTATGAGC +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNYSRLR*QTHRMS
Trigger: GCTCATACGGTGTGTCTGTCATCTCAGTCTGGAGTA...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGAAAAACAACAGAAAATaGACAGAGCACGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMKNNRK*TEHVGK
Trigger: CTTGCCCACGTGCTCTGTTCATTTTCTGTTGTTTTT...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTATTCTCTCCAACGCCTTaGATTTTCCAAGCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: AQSRCHFTATTPESTPNVFSPTP*IFQAFR
Trigger: GCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAA...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGCTCCTTTTCGGGTTGTaGTTCAGCAGTTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKLLFGL*FSSSSS
Trigger: GGAGCTTGAACTGCTGAAGCACAACCCGAAAAGGAG...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATTGCTTAGAACGGCAATaGCACAGTGGAATAAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNCLERQ*HSGIRG
Trigger: CCCCCTTATTCCACTGTGGCATTGCCGTTCTAAGCA...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATCAGGCATCAGGTAACTaGTTAGAACGGCAATGCCAC +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNQASGN*LERQCH
Trigger: GTGGCATTGCCGTTCTAAGCAGTTACCTGATGCCTG...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGCCCTTAGTGGTCAGATaGACTTTGTCACAATGTACA +
Preference number: 4 (lower is better)
Translates to: SVYSLAVYENICPPLRQMPLVVR*TLSQCT
Trigger: TGTACATTGTGACAAAGTGCATCTGACCACTAAGGG...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATACATGGGACCATTTCTaGAAATCTCGGCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNTWDHF*KSRPIS
Trigger: AGAGATGGGCCGAGATTTTCAGAAATGGTCCCATGT...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCTTCTCTCCAACGCCTTaGATTTTCCAAGCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFFSPTP*IFQAFR
Trigger: GCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAA...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR GCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGAGAGGGATAAGAAAATaGCTGTTTCTAGAAAACCGC +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGRGIRK*LFLENR
Trigger: GCGGTTTTCTAGAAACAGGCATTTTCTTATCCCTCT...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCTTCGCTGCTCCTCCTTaGCGATTATTTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFFAAPP*RLFPCL
Trigger: AAGACATGGAAATAATCGCCAAGGAGGAGCAGCGAA...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CCA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGAGCTTACTGCTTTCATaGACCCATAATCTTACAGCA +
Preference number: 4 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGSLLLS*THNLTA
Trigger: TGCTGTAAGATTATGGGTCCATGAAAGCAGTAAGCT...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATTTCTCAGTGGACAAATaGACAAACCATCTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDFSVDK*TNHLCL
Trigger: CAAACAGAGATGGTTTGTCCATTTGTCCACTGAGAA...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATAATTTCACAGCCAGATaGGGAGCTAAAAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDNFTAR*GAKRNS
Trigger: GGAATTTCTTTTAGCTCCCCATCTGGCTGTGAAATT...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGTCAAATCGTTTGAGATaGAAACAGGCTACGATGGGC +
Preference number: 4 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKSNRLR*KQATMG
Trigger: GCCCATCGTAGCCTGTTTTCATCTCAAACGATTTGA...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATATTTTAACACTGCTGTaGATGTGCTGGGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNILTLL*MCWGHQ
Trigger: TTGGTGACCCCAGCACATTCACAGCAGTGTTAAAAT...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATTTCTCTCCAACGCCTTaGATTTTCCAAGCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNFSPTP*IFQAFR
Trigger: GCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAA...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATGTTCAAGCTCCCGTTTaGTTGGTTCCCAAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNVQAPV*LVPKLK
Trigger: TTTCAACTTGGGAACCAACCAAACGGGAGCTTGAAC...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCAGTGTTCAAATCGTTTaGGATGAAAACAGGCTACGA +
Preference number: 4 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFSVQIV*DENRLR
Trigger: TCGTAGCCTGTTTTCATCTCAAACGATTTGAACACT...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR TCA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTAGCTAAAAGAAATTCCTaGACCCAACGCGTAAATATT +
Preference number: 4 (lower is better)
Translates to: AQSRCHFTATTPESTPNVAKRNS*TQRVNI
Trigger: AATATTTACGCGTTGGGTTCAGGAATTTCTTTTAGC...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATTGTGAGGCTTGCCAATaGATTGCCTTTGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNCEACQ*IAFVFL
Trigger: CAGAAAAACAAAGGCAATGCATTGGCAAGCCTCACA...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR GCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATCCCTTAGTGGTCAGATaGACTTTGTCACAATGTACA +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNPLVVR*TLSQCT
Trigger: TGTACATTGTGACAAAGTGCATCTGACCACTAAGGG...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR TCA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATAGTGTTCAAATCGTTTaGGATGAAAACAGGCTACGA +
Preference number: 4 (lower is better)
Translates to: PTSFSMACELRIGFTFLNSVQIV*DENRLR
Trigger: TCGTAGCCTGTTTTCATCTCAAACGATTTGAACACT...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS TCA 90 bp ACCGGTTTGCGCCGGCCTGAGCTCTGCCGCAAAGAGGCGGGGCGATaGGCTGGAGCGCCGCAGGTCGGGCCTCCATCCAGGGCCTGCGCT +
Preference number: 5 (lower is better)
Translates to: TGLRRPELCRKEAGR*AGAPQVGPPSRACA
Trigger: AGCGCAGGCCCTGGATGGAGGCCCGACCTGCGGCGCTCCAGCTCATCGCCCCGCCTCTTTGCGGCAGAGCTCAGGCCGGCGCAAACCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS CCA 90 bp CCCGGGACCCTGGCGGCTAGACGTTCCCTGTCTCTTCCAGAGGACTaGGGAGGCGGGGGCGTGCTGCGGTTGGGCGGCGCGAGACGTCAG +
Preference number: 5 (lower is better)
Translates to: PGTLAARRSLSLPED*GGGGVLRLGGARRQ
Trigger: CTGACGTCTCGCGCCGCCCAACCGCAGCACGCCCCCGCCTCCCCAGTCCTCTGGAAGAGACAGGGAACGTCTAGCCGCCAGGGTCCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS GCA 90 bp GAGCTGTTTGCAGGGCCCCCGGTTGCCGTAACCTGGCTCGGGCCCTaGAGTGCCGTGGCCCGGGGCTGGAACTGCCTGCCAACTGCCTGG +
Preference number: 5 (lower is better)
Translates to: ELFAGPPVAVTWLGP*SAVARGWNCLPTAW
Trigger: CCAGGCAGTTGGCAGGCAGTTCCAGCCCCGGGCCACGGCACTGCAGGGCCCGAGCCAGGTTACGGCAACCGGGGGCCCTGCAAACAGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS GCA 90 bp GCCCGCAGGTTCTGCTTCCAGTTGTCCACCTTGAAGCTGCCCAGGTaGGAGCAGCCCGGCGGCGCTACCGCCAGCTCGGCGTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: ARRFCFQLSTLKLPR*EQPGGATASSASMA
Trigger: GGCCATGGACGCCGAGCTGGCGGTAGCGCCGCCGGGCTGCTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAAGCAGAACCTGCGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS TCA 90 bp CGGCGCGAGACGTCAGTCCTAGCACTGAACCGGTTTGCGCCGGCCTaGGCTCTGCCGCAAAGAGGCGGGGCGATGAGCTGGAGCGCCGCA +
Preference number: 5 (lower is better)
Translates to: RRETSVLALNRFAPA*ALPQRGGAMSWSAA
Trigger: TGCGGCGCTCCAGCTCATCGCCCCGCCTCTTTGCGGCAGAGCTCAGGCCGGCGCAAACCGGTTCAGTGCTAGGACTGACGTCTCGCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS GCA 90 bp TGCGGTTGGGCGGCGCGAGACGTCAGTCCTAGCACTGAACCGGTTTaGGCCGGCCTGAGCTCTGCCGCAAAGAGGCGGGGCGATGAGCTG +
Preference number: 5 (lower is better)
Translates to: CGWAARDVSPSTEPV*AGLSSAAKRRGDEL
Trigger: CAGCTCATCGCCCCGCCTCTTTGCGGCAGAGCTCAGGCCGGCGCAAACCGGTTCAGTGCTAGGACTGACGTCTCGCGCCGCCCAACCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAGCTGTGAGGCCCCCGTaGCACCCCCATGTCATGACA +
Preference number: 5 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVAVRPP*HPHVMT
Trigger: TGTCATGACATGGGGGTGCAACGGGGGCCTCACAGC...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTTGGCAGATACAGGACTaGGCCTTGCGCTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: LHSARHPSKLGRPKVASLWQIQD*ALRLRA
Trigger: GGCCCGCAAGCGCAAGGCCAAGTCCTGTATCTGCCA...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR CAA 90 bp ACCAGAGGCCACTCCAGCTTCGCGACCAACACCCTTGGCTGCCAGGCAGCGGTAAGATCAATGGCCAGGTaGTGCCGCTTCGCCTTCGCA +
Preference number: 5 (lower is better)
Translates to: TRGHSSFATNTLGCQAAVRSMAR*CRFAFA
Trigger: TGCGAAGGCGAAGCGGCACAACCTGGCCATTGATCT...TACCGCTGCCTGGCAGCCAAGGGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTTGGCAACCGCTGCACTaGATCTTGGCGCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LHSARHPSKLGRPKVASLWQPLH*ILALLP
Trigger: GGGCAGCAGCGCCAAGATCAAGTGCAGCGGTTGCCA...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCGGCACGAGAACTGCTaGAACCCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LHSARHPSKLGRPKVASLRHENC*NPGGGG
Trigger: ACCTCCACCTCCTGGGTTCAAGCAGTTCTCGTGCCG...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTGACTTGGCCTTGCGCTaGCGGGCCTCAGCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: LVPTSFSMACELRIGFTFDLALR*RASAVP
Trigger: CGGCACGGCTGAGGCCCGCAAGCGCAAGGCCAAGTC...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR CAA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGCCGCTGCACTTGATCTaGGCGCTGCTGCCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGPLHLI*ALLPKC
Trigger: GCACTTGGGCAGCAGCGCCAAGATCAAGTGCAGCGG...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCCCATTGTCATCACCTTaGCAGTGTCGGTGGAGCACG +
Preference number: 5 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSPLSSP*QCRWST
Trigger: CGTGCTCCACCGACACTGCAAAGGTGATGACAATGG...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAACGGCACGAGAACTGCTaGAACCCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKRHENC*NPGGGG
Trigger: ACCTCCACCTCCTGGGTTCAAGCAGTTCTCGTGCCG...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp ATCAGCCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGCTAATCGGGAGCTGTTaGCAGGGCCCCCGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: ISPRRPMVQFEVIFLLFGLIGSC*QGPRLP
Trigger: CGGCAACCGGGGGCCCTGCAAACAGCTCCCGATTAG...CCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGGCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCGGGGGCGTGCTGCGGTaGGGCGGCGCGAGACGTCAG +
Preference number: 5 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFGGVLR*GGARRQ
Trigger: CTGACGTCTCGCGCCGCCCAACCGCAGCACGCCCCC...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGATACAGGACTTGGCCTaGCGCTTGCGGGCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ALLTSSITVSFYCHHARKIQDLA*RLRASA
Trigger: GGCTGAGGCCCGCAAGCGCAAGGCCAAGTCCTGTAT...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR CAA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCATGCAGTTGCAGTGGTaGGGGTTGTTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTMQLQW*GLLAFF
Trigger: GAAGAAGGCCAACAACCCCAACCACTGCAACTGCAT...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGCCGCTGCACTTGATCTaGGCGCTGCTGCCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVPLHLI*ALLPKC
Trigger: GCACTTGGGCAGCAGCGCCAAGATCAAGTGCAGCGG...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp CTGCACTCCGCAAGACACCCCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTGCTTCCACGTGCAGCTaGATGCTGTTACCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: LHSARHPSKLGRPKVASLASTCS*MLLPAE
Trigger: TTCTGCAGGTAACAGCATCAAGCTGCACGTGGAAGC...AAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGGGGTGTCTTGCGGAGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCACCCAAACAGCAGAACTaGGTCACATGGGACCATTTC +
Preference number: 5 (lower is better)
Translates to: GRRDKMQAPPEATPASRPPKQQN*VTWDHF
Trigger: GAAATGGTCCCATGTGACCAAGTTCTGCTGTTTGGG...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCACTTCTCTCCAACGCCTaGCATTTTCCAAGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: GRRDKMQAPPEATPASRPLLSNA*HFPSFS
Trigger: CGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAG...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAAGTTCAAGCTCCCGTTaGGTTGGTTCCCAAGTTGAA +
Preference number: 5 (lower is better)
Translates to: GRRDKMQAPPEATPASRPSSSSR*VGSQVE
Trigger: TTCAACTTGGGAACCAACCAAACGGGAGCTTGAACT...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGCCATTGTCATCACCTTaGCAGTGTCGGTGGAGCACG +
Preference number: 5 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGPLSSP*QCRWST
Trigger: CGTGCTCCACCGACACTGCAAAGGTGATGACAATGG...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGTGGCAGATACAGGACTaGGCCTGGCTCGGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGWQIQD*AWLGPC
Trigger: GCAGGGCCCGAGCCAGGCCAAGTCCTGTATCTGCCA...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537526.6
CDS-3UTR CAA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTTCCAGTTGTCCACCTaGAAGCTGCCCAGGTGCGAG +
Preference number: 5 (lower is better)
Translates to: ALLTSSITVSFYCHHARKFQLST*KLPRCE
Trigger: CTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAA...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS-3UTR CAA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCCAAGCTCCCGTTTGGTaGGTTCCCAAGTTGAAAACT +
Preference number: 5 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTQAPVW*VPKLKT
Trigger: AGTTTTCAACTTGGGAACCAACCAAACGGGAGCTTG...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp ACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCAACACCTTTCTCCTTTTCGGGTaGTGCTTCAGCAGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: TRQDAGSTRGHSSFATNTFLLFG*CFSSSS
Trigger: GCTTGAACTGCTGAAGCACAACCCGAAAAGGAGAAA...GGTGTTGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGATGCAGTTGCAGTGGTaGGGGTTGTTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGMQLQW*GLLAFF
Trigger: GAAGAAGGCCAACAACCCCAACCACTGCAACTGCAT...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATCCGCTGCACTTGATCTaGGCGCTGCTGCCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDPLHLI*ALLPKC
Trigger: GCACTTGGGCAGCAGCGCCAAGATCAAGTGCAGCGG...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGTGGCAACCGCTGCACTaGATCTTGGCGCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGWQPLH*ILALLP
Trigger: GGGCAGCAGCGCCAAGATCAAGTGCAGCGGTTGCCA...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAATACTTGTTGTCATTGTaGAGACTGTCCGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKYLLSL*RLSVGC
Trigger: GCAGCCCACGGACAGTCTCAACAATGACAACAAGTA...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGCTGTCCAGGACGTCCTaGATGCTGGCCTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLALSRTS*MLALVM
Trigger: CATCACCAAGGCCAGCATCAAGGACGTCCTGGACAG...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp GGCAGACGAGACAAGATGCAGGCTCCACCAGAGGCCACTCCAGCTTCGCGACCATACTTTTCCTCCCCCTaGTCCCTAGTTTCTAATTTC +
Preference number: 5 (lower is better)
Translates to: GRRDKMQAPPEATPASRPYFSSP*SLVSNF
Trigger: GAAATTAGAAACTAGGGACAAGGGGGAGGAAAAGTA...TGGTCGCGAAGCTGGAGTGGCCTCTGGTGGAGCCTGCATCTTGTCTCGTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAATTTCGCTGCTCCTCCTaGGCGATTATTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKFRCSS*AIISMS
Trigger: AGACATGGAAATAATCGCCAAGGAGGAGCAGCGAAA...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGCAAGCTCCCGTTTGGTaGGTTCCCAAGTTGAAAACT +
Preference number: 5 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGQAPVW*VPKLKT
Trigger: AGTTTTCAACTTGGGAACCAACCAAACGGGAGCTTG...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CCAGAGGAGCCAGGCACACAGGGCGGGCAGCAACATAAACGGCACCCATTAAAAAGTTCAAGCTCCCGTTaGGTTGGTTCCCAAGTTGAA +
Preference number: 5 (lower is better)
Translates to: PEEPGTQGGQQHKRHPLKSSSSR*VGSQVE
Trigger: TTCAACTTGGGAACCAACCAAACGGGAGCTTGAACT...TTTTAATGGGTGCCGTTTATGTTGCTGCCCGCCCTGTGTGCCTGGCTCCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGCATGTGTTCCCAAGGTaGATCAGCCCACGCAGACCT +
Preference number: 5 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLAHVFPR*ISPRRP
Trigger: AGGTCTGCGTGGGCTGATCAACCTTGGGAACACATG...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGATGCAGTTGCAGTGGTaGGGGTTGTTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVMQLQW*GLLAFF
Trigger: GAAGAAGGCCAACAACCCCAACCACTGCAACTGCAT...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp CCAGTAAACTGGGGCGTCCCAAGGTGGCAAGCCTTCATGAAGGCACTGCCCAGCAACAGGGAATACTTGTaGTCATTGTTGAGACTGTCC +
Preference number: 5 (lower is better)
Translates to: PVNWGVPRWQAFMKALPSNREYL*SLLRLS
Trigger: GGACAGTCTCAACAATGACAACAAGTATTCCCTGTT...GCTGGGCAGTGCCTTCATGAAGGCTTGCCACCTTGGGACGCCCCAGTTTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GGCCCCTTAGTGGTCAGATGCACTTTGTCACAATGTACACCTACATGGGGTGATCTGTCCAGGACGTCCTaGATGCTGGCCTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: GPLVVRCTLSQCTPTWGDLSRTS*MLALVM
Trigger: CATCACCAAGGCCAGCATCAAGGACGTCCTGGACAG...ATCACCCCATGTAGGTGTACATTGTGACAAAGTGCATCTGACCACTAAGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGCATGTGTTCCCAAGGTaGATCAGCCCACGCAGACCT +
Preference number: 5 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGHVFPR*ISPRRP
Trigger: AGGTCTGCGTGGGCTGATCAACCTTGGGAACACATG...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGTGGCAACCGCTGCACTaGATCTTGGCGCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKWQPLH*ILALLP
Trigger: GGGCAGCAGCGCCAAGATCAAGTGCAGCGGTTGCCA...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGTTCATCCTGCTCTCTTaGCTGGAGGCCATGAAAGGG +
Preference number: 5 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLAFILLS*LEAMKG
Trigger: CCCTTTCATGGCCTCCAGCAAAGAGAGCAGGATGAA...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTCCTGAGGTCAGGAGTTaGAGACATGGTGAAACCCCA +
Preference number: 5 (lower is better)
Translates to: LVPTSFSMACELRIGFTFPEVRS*RHGETP
Trigger: TGGGGTTTCACCATGTCTCAAACTCCTGACCTCAGG...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CCCACGCAGACCTATGGTGCAGTTCGAGGTGATCTTTCTCCTTTTCGGGTTGTGTGGCAGATACAGGACTaGGCCTTCGGCTATTGTCAT +
Preference number: 5 (lower is better)
Translates to: PTQTYGAVRGDLSPFRVVWQIQD*AFGYCH
Trigger: ATGACAATAGCCGAAGGCCAAGTCCTGTATCTGCCA...CACAACCCGAAAAGGAGAAAGATCACCTCGAACTGCACCATAGGTCTGCGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGGCAGAACAGACACGCTaGAAAACGCGACGTAGTGTC +
Preference number: 5 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGAEQTR*KTRRSV
Trigger: GACACTACGTCGCGTTTTCAAGCGTGTCTGTTCTGC...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CATGGACCCATAATCTTACAGCAGGTAGGGGCCTTTCCACACCGAGTGCTGGGGTACTTTTCCTCCCCCTaGTCCCTAGTTTCTAATTTC +
Preference number: 5 (lower is better)
Translates to: HGPIILQQVGAFPHRVLGYFSSP*SLVSNF
Trigger: GAAATTAGAAACTAGGGACAAGGGGGAGGAAAAGTA...CCCCAGCACTCGGTGTGGAAAGGCCCCTACCTGCTGTAAGATTATGGGTCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGTTTCGCTGCTCCTCCTaGGCGATTATTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLAFRCSS*AIISMS
Trigger: AGACATGGAAATAATCGCCAAGGAGGAGCAGCGAAA...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTTCTCCTTTTCGGGTaGTGCTTCAGCAGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: LVPTSFSMACELRIGFTFFLLFG*CFSSSS
Trigger: GCTTGAACTGCTGAAGCACAACCCGAAAAGGAGAAA...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCCATTGTCATCACCTTaGCAGTGTCGGTGGAGCACG +
Preference number: 5 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFPLSSP*QCRWST
Trigger: CGTGCTCCACCGACACTGCAAAGGTGATGACAATGG...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGTACTTGTTGTCATTGTaGAGACTGTCCGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGYLLSL*RLSVGC
Trigger: GCAGCCCACGGACAGTCTCAACAATGACAACAAGTA...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTAGCTTCCACGTGCAGCTaGATGCTGTTACCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: AQSRCHFTATTPESTPNVASTCS*MLLPAE
Trigger: TTCTGCAGGTAACAGCATCAAGCTGCACGTGGAAGC...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTACCTGAGGTCAGGAGTTaGAGACATGGTGAAACCCCA +
Preference number: 5 (lower is better)
Translates to: AQSRCHFTATTPESTPNVPEVRS*RHGETP
Trigger: TGGGGTTTCACCATGTCTCAAACTCCTGACCTCAGG...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGGTGGTCAGATGCACTTaGTCACAATGTACACCTACA +
Preference number: 5 (lower is better)
Translates to: ALLTSSITVSFYCHHARKVVRCT*SQCTPT
Trigger: TGTAGGTGTACATTGTGACAAAGTGCATCTGACCAC...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp AGTGTTTACTCCCTGGCTGTCTATGAAAACATCTGCCCACCGCTGAGACAGATGTTTCGCTGCTCCTCCTaGGCGATTATTTCCATGTCT +
Preference number: 5 (lower is better)
Translates to: SVYSLAVYENICPPLRQMFRCSS*AIISMS
Trigger: AGACATGGAAATAATCGCCAAGGAGGAGCAGCGAAA...CATCTGTCTCAGCGGTGGGCAGATGTTTTCATAGACAGCCAGGGAGTAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp AGCCAGCATCTCCAAAATGCAGGCCATTTTAACACTGCTGTGAATGTGCTGGGGCTTCTCTCCAACGCCTaGCATTTTCCAAGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: SQHLQNAGHFNTAVNVLGLLSNA*HFPSFS
Trigger: CGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAG...CCCCAGCACATTCACAGCAGTGTTAAAATGGCCTGCATTTTGGAGATGCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGAACAGGGAATACTTGTaGTCATTGTTGAGACTGTCC +
Preference number: 5 (lower is better)
Translates to: ALLTSSITVSFYCHHARKNREYL*SLLRLS
Trigger: GGACAGTCTCAACAATGACAACAAGTATTCCCTGTT...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GCTCTGCTGACAAGCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGGCAAACAGGGAATACTaGTTGTCATTGTTGAGACTG +
Preference number: 5 (lower is better)
Translates to: ALLTSSITVSFYCHHARKANREY*LSLLRL
Trigger: CAGTCTCAACAATGACAACAAGTATTCCCTGTTTGC...CTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGCTTGTCAGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTACCCAAACAGCAGAACTaGGTCACATGGGACCATTTC +
Preference number: 5 (lower is better)
Translates to: AQSRCHFTATTPESTPNVPKQQN*VTWDHF
Trigger: GAAATGGTCCCATGTGACCAAGTTCTGCTGTTTGGG...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATTTCATCCTGCTCTCTTaGCTGGAGGCCATGAAAGGG +
Preference number: 5 (lower is better)
Translates to: PTSFSMACELRIGFTFLNFILLS*LEAMKG
Trigger: CCCTTTCATGGCCTCCAGCAAAGAGAGCAGGATGAA...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp AACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTTTCGCTGCTCCTCCTTGGCGAACAGGGAATACTTGTaGTCATTGTTGAGACTGTCC +
Preference number: 5 (lower is better)
Translates to: NFSPTPCIFQAFRCSSLANREYL*SLLRLS
Trigger: GGACAGTCTCAACAATGACAACAAGTATTCCCTGTT...CGCCAAGGAGGAGCAGCGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTGCAAACAGGGAATACTaGTTGTCATTGTTGAGACTG +
Preference number: 5 (lower is better)
Translates to: LVPTSFSMACELRIGFTFANREY*LSLLRL
Trigger: CAGTCTCAACAATGACAACAAGTATTCCCTGTTTGC...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp CTGGTCCCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTAAGCAAGACTCGCTCTaGAGACTAAAGGAGAAGTTA +
Preference number: 5 (lower is better)
Translates to: LVPTSFSMACELRIGFTFKQDSL*RLKEKL
Trigger: TAACTTCTCCTTTAGTCTCAAGAGCGAGTCTTGCTT...AAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGGGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGCTCCCGTTTGGTaGGTTCCCAAGTTGAAAACT +
Preference number: 5 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFQAPVW*VPKLKT
Trigger: AGTTTTCAACTTGGGAACCAACCAAACGGGAGCTTG...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCAGTTCAAGCTCCCGTTaGGTTGGTTCCCAAGTTGAA +
Preference number: 5 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFSSSSR*VGSQVE
Trigger: TTCAACTTGGGAACCAACCAAACGGGAGCTTGAACT...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGTACTTGTTGTCATTGTaGAGACTGTCCGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKYLLSL*RLSVGC
Trigger: GCAGCCCACGGACAGTCTCAACAATGACAACAAGTA...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp GCTCAATCACGGTGTCATTTTACTGCCACCACGCCCGAAAGTACACCAAATGTAGTGGTCAGATGCACTTaGTCACAATGTACACCTACA +
Preference number: 5 (lower is better)
Translates to: AQSRCHFTATTPESTPNVVVRCT*SQCTPT
Trigger: TGTAGGTGTACATTGTGACAAAGTGCATCTGACCAC...TACATTTGGTGTACTTTCGGGCGTGGTGGCAGTAAAATGACACCGTGATTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS-3UTR CAA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGCTTCTCTCCAACGCCTaGCATTTTCCAAGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKLLSNA*HFPSFS
Trigger: CGAAAAGCTTGGAAAATGCAAGGCGTTGGAGAGAAG...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp GTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCCAAGTTTCTCCTTTTCGGGTaGTGCTTCAGCAGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: VWLVPKLKTSLQRLAFSKFLLFG*CFSSSS
Trigger: GCTTGAACTGCTGAAGCACAACCCGAAAAGGAGAAA...CTTGGAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp TCCCGTTTGGTTGGTTCCCAAGTTGAAAACTTCTCTCCAACGCCTTGCATTTTCGCAAACAGGGAATACTaGTTGTCATTGTTGAGACTG +
Preference number: 5 (lower is better)
Translates to: SRLVGSQVENFSPTPCIFANREY*LSLLRL
Trigger: CAGTCTCAACAATGACAACAAGTATTCCCTGTTTGC...GAAAATGCAAGGCGTTGGAGAGAAGTTTTCAACTTGGGAACCAACCAAACGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS-3UTR CAA 90 bp CCCACCAGCTTCTCCATGGCCTGTGAGCTAAGAATAGGTTTCACGTTTTTAAATCAGCCCGAGACACACTaGCTTCATAAACTGTATTTC +
Preference number: 5 (lower is better)
Translates to: PTSFSMACELRIGFTFLNQPETH*LHKLYF
Trigger: GAAATACAGTTTATGAAGCAAGTGTGTCTCGGGCTG...ATTTAAAAACGTGAAACCTATTCTTAGCTCACAGGCCATGGAGAAGCTGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261497.9
ENST00000537526.6
CDS CCA 72 bp GACGACGCCAGCGCGGCGTGGGGGCTGCTCGGCGGCTaGCCAGGCTGGCCAAGGCCCGGGCGCCGAGAACAA +
Preference number: 6 (lower is better)
Translates to: DDASAAWGLLGG*PGWPRPGRREQ
Trigger: TTGTTCTCGGCGCCCGGGCCTTGGCCAGCCTGGCCAGCCGCCGAGCAGCCCCCACGCCGCGCTGGCGTCGTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS CCA 72 bp AGCAGCCCGGCGGCGCTACCGCCAGCTCGGCGTCCATaGCCTCGCCCTCGGGCTCTGGCCGGGACACCATGG +
Preference number: 6 (lower is better)
Translates to: SSPAALPPARRP*PRPRALAGTPW
Trigger: CCATGGTGTCCCGGCCAGAGCCCGAGGGCGAGGCCATGGACGCCGAGCTGGCGGTAGCGCCGCCGGGCTGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS GCA 72 bp CAGTGCCGTGGCCCGGGGCTGGAACTGCCTGCCAACTaGCTGGTAGGCGCTGCCCCCGGCCGCAAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: QCRGPGLELPAN*LVGAAPGRKLG
Trigger: CCCCAGCTTGCGGCCGGGGGCAGCGCCTACCAGGCAGTTGGCAGGCAGTTCCAGCCCCGGGCCACGGCACTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537526.6
ENST00000579645.5
CDS GCA 72 bp GGCCCTGCAGTGCCGTGGCCCGGGGCTGGAACTGCCTaGCAACTGCCTGGTAGGCGCTGCCCCCGGCCGCAA +
Preference number: 6 (lower is better)
Translates to: GPAVPWPGAGTA*QLPGRRCPRPQ
Trigger: TTGCGGCCGGGGGCAGCGCCTACCAGGCAGTTGGCAGGCAGTTCCAGCCCCGGGCCACGGCACTGCAGGGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537526.6
ENST00000579645.5
CDS GCA 72 bp GCAGGGCCCCCGGTTGCCGTAACCTGGCTCGGGCCCTaGAGTGCCGTGGCCCGGGGCTGGAACTGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: AGPPVAVTWLGP*SAVARGWNCLP
Trigger: TGGCAGGCAGTTCCAGCCCCGGGCCACGGCACTGCAGGGCCCGAGCCAGGTTACGGCAACCGGGGGCCCTGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS CCA 72 bp CGGGAGCTGTTTGCAGGGCCCCCGGTTGCCGTAACCTaGCTCGGGCCCTGCAGTGCCGTGGCCCGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: RELFAGPPVAVT*LGPCSAVARGW
Trigger: CCAGCCCCGGGCCACGGCACTGCAGGGCCCGAGCCAGGTTACGGCAACCGGGGGCCCTGCAAACAGCTCCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS TCA 72 bp CGCCGGCCTGAGCTCTGCCGCAAAGAGGCGGGGCGATaGGCTGGAGCGCCGCAGGTCGGGCCTCCATCCAGG +
Preference number: 6 (lower is better)
Translates to: RRPELCRKEAGR*AGAPQVGPPSR
Trigger: CCTGGATGGAGGCCCGACCTGCGGCGCTCCAGCTCATCGCCCCGCCTCTTTGCGGCAGAGCTCAGGCCGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS GCA 72 bp GCGGCGCGAGACGTCAGTCCTAGCACTGAACCGGTTTaGGCCGGCCTGAGCTCTGCCGCAAAGAGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: AARDVSPSTEPV*AGLSSAAKRRG
Trigger: GCCCCGCCTCTTTGCGGCAGAGCTCAGGCCGGCGCAAACCGGTTCAGTGCTAGGACTGACGTCTCGCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS CCA 72 bp TACAGGACTTGGCCTGGCTCGGGCCCTGCAGTGCCGTaGCCCGGGGCTGGAACTGCCTGCCAACTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: YRTWPGSGPAVP*PGAGTACQLPG
Trigger: ACCAGGCAGTTGGCAGGCAGTTCCAGCCCCGGGCCACGGCACTGCAGGGCCCGAGCCAGGCCAAGTCCTGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537526.6
CDS CCA 72 bp TTCCAGAGGACTGGGGAGGCGGGGGCGTGCTGCGGTTaGGCGGCGCGAGACGTCAGTCCTAGCACTGAACCG +
Preference number: 6 (lower is better)
Translates to: FQRTGEAGACCG*AARDVSPSTEP
Trigger: CGGTTCAGTGCTAGGACTGACGTCTCGCGCCGCCCAACCGCAGCACGCCCCCGCCTCCCCAGTCCTCTGGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS GCA 72 bp TTCTGCTTCCAGTTGTCCACCTTGAAGCTGCCCAGGTaGGAGCAGCCCGGCGGCGCTACCGCCAGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: FCFQLSTLKLPR*EQPGGATASSA
Trigger: CGCCGAGCTGGCGGTAGCGCCGCCGGGCTGCTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAAGCAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS TCA 72 bp AGATGGCCCGCAGGTTCTGCTTCCAGTTGTCCACCTTaGAGCTGCCCAGGTGCGAGCAGCCCGGCGGCGCTA +
Preference number: 6 (lower is better)
Translates to: RWPAGSASSCPP*SCPGASSPAAL
Trigger: TAGCGCCGCCGGGCTGCTCGCACCTGGGCAGCTTCAAGGTGGACAACTGGAAGCAGAACCTGCGGGCCATCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261497.9
CDS TCA 72 bp ACGTCAGTCCTAGCACTGAACCGGTTTGCGCCGGCCTaGGCTCTGCCGCAAAGAGGCGGGGCGATGAGCTGG +
Preference number: 6 (lower is better)
Translates to: TSVLALNRFAPA*ALPQRGGAMSW
Trigger: CCAGCTCATCGCCCCGCCTCTTTGCGGCAGAGCTCAGGCCGGCGCAAACCGGTTCAGTGCTAGGACTGACGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS CCA 72 bp ATAGTCCGTCTGGTACAGAGCCGCCTCCCGGGACCCTaGCGGCTAGACGTTCCCTGTCTCTTCCAGAGGACT +
Preference number: 6 (lower is better)
Translates to: IVRLVQSRLPGP*RLDVPCLFQRT
Trigger: AGTCCTCTGGAAGAGACAGGGAACGTCTAGCCGCCAGGGTCCCGGGAGGCGGCTCTGTACCAGACGGACTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579645.5
CDS CCA 72 bp CAAAGCAGCTCCAGGAGCCTCCGTACATCAGATCAATaGCCAGGTTGTGCCGCTTCGCCTTCGCATGCTCGT +
Preference number: 6 (lower is better)
Translates to: QSSSRSLRTSDQ*PGCAASPSHAR
Trigger: ACGAGCATGCGAAGGCGAAGCGGCACAACCTGGCCATTGATCTGATGTACGGAGGCTCCTGGAGCTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455117.6
CDS TCA 72 bp CATGTTGGCCATGATGGTCTCAATCTGTTGACCTCATaGTCTGCCCGCTTCGACCTCCTGAAGTGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: HVGHDGLNLLTS*SARFDLLKCWD
Trigger: ATCCCAGCACTTCAGGAGGTCGAAGCGGGCAGATCATGAGGTCAACAGATTGAGACCATCATGGCCAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478443.1
CDS TCA 72 bp ATGGCCAGGTTGTGCCGCTTCGCCTTCGCATGCTCGTaGATATGCTTCTTTGTGAAACAGCCGAAGAAGACA +
Preference number: 6 (lower is better)
Translates to: MARLCRFAFACS*ICFFVKQPKKT
Trigger: TGTCTTCTTCGGCTGTTTCACAAAGAAGCATATTCACGAGCATGCGAAGGCGAAGCGGCACAACCTGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261497.9
ENST00000455117.6
ENST00000476111.5
ENST00000537526.6
ENST00000579645.5
ENST00000584538.1
CDS GCA 72 bp TGTCATAGATGTAGTCCTGGCACAGAAAACAGTAGATaGCTCCGTACATCAGATCAATGGCCAGGTTGTGCC +
Preference number: 6 (lower is better)
Translates to: CHRCSPGTENSR*LRTSDQWPGCA
Trigger: GGCACAACCTGGCCATTGATCTGATGTACGGAGGCATCTACTGTTTTCTGTGCCAGGACTACATCTATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261497.9
ENST00000476111.5
ENST00000537526.6
ENST00000579645.5
ENST00000584538.1