RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USP10 (Homo sapiens)

Ensembl gene IDs: ENSG00000103194

Ensembl transcript IDs: ENST00000219473.12, ENST00000562092.1, ENST00000563048.5, ENST00000563892.5, ENST00000564566.1, ENST00000566378.1, ENST00000569038.5, ENST00000569511.5, ENST00000570191.5

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp AGCATTAATGTAGCACCAGTTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACCGCGATCCTCCGGCTaGTCACGCTGCTTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: SINVAPVPFIDQPTGLQRPRSSG*SRCFPR
Trigger: GCGGGGGAAGCAGCGTGAGCAGCCGGAGGATCGCGG...TCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATTAATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS-3UTR CCA 90 bp AATGTAGCACCAGTTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACACTGGGGCTGCCCGTTTCATTaGGACTCCGCGATCCTCCGG +
Preference number: 4 (lower is better)
Translates to: NVAPVPFIDQPTGLQRHWGCPFH*DSAILR
Trigger: CCGGAGGATCGCGGAGTCCCAATGAAACGGGCAGCC...CCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS-3UTR GCA 90 bp AATGTAGCACCAGTTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACACTGGATCAGCCCACGGGGTTaGAACGACACTGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: NVAPVPFIDQPTGLQRHWISPRG*NDTGLW
Trigger: CCATAAACCAGTGTCGTTGCAACCCCGTGGGCTGAT...CCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS-3UTR GCA 90 bp AGCATTAATGTAGCACCAGTTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACGGGCAAGCAACCAATaGCTGCAGTGTAGCATTAAT +
Preference number: 4 (lower is better)
Translates to: SINVAPVPFIDQPTGLQRRASNQ*LQCSIN
Trigger: ATTAATGCTACACTGCAGGCATTGGTTGCTTGCCCG...TCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATTAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS-3UTR CCA 90 bp AATGTAGCACCAGTTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACACTGGAACGACACTGGTTTATaGATTAGGGTTACATTCTCC +
Preference number: 4 (lower is better)
Translates to: NVAPVPFIDQPTGLQRHWNDTGL*IRVTFS
Trigger: GGAGAATGTAACCCTAATCCATAAACCAGTGTCGTT...CCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS-3UTR CAA 90 bp AATGTAGCACCAGTTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACACTGGTGGCTGCCCGTTTCATaGGGACTCCGCGATCCTCCG +
Preference number: 5 (lower is better)
Translates to: NVAPVPFIDQPTGLQRHWWLPVS*GLRDPP
Trigger: CGGAGGATCGCGGAGTCCCAATGAAACGGGCAGCCA...CCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS TCA 90 bp GGAACTGGCATATCTGCCCTATTCCAGGAGAGGGCAACCAGGGCATaGTGTTTCAAGACGGGACAGAATGGCAGTGCTGGTAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GTGISALFQERATRA*CFKTGQNGSAGRAS
Trigger: AGAAGCTCTACCAGCACTGCCATTCTGTCCCGTCTTGAAACATCATGCCCTGGTTGCCCTCTCCTGGAATAGGGCAGATATGCCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569511.5
CDS-3UTR CAA 90 bp AATGTAGCACCAGTTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACACTGGGATCAGCCCACGGGGTaGCAACGACACTGGTTTATG +
Preference number: 5 (lower is better)
Translates to: NVAPVPFIDQPTGLQRHWDQPTG*QRHWFM
Trigger: CATAAACCAGTGTCGTTGCAACCCCGTGGGCTGATC...CCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS-3UTR CAA 90 bp AATGTAGCACCAGTTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACACTGGCACCAGTTCCCTTTATaGATCAGCCCACGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: NVAPVPFIDQPTGLQRHWHQFPL*ISPRGC
Trigger: GCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTG...CCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS TCA 90 bp CTCCAAAAATATACTGCCCTATTCCAGGAGAGGGCAACCAGGGCATaGTGTTTCAAGACGGGACAGAATGGCAGTGCTGGTAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LQKYTALFQERATRA*CFKTGQNGSAGRAS
Trigger: AGAAGCTCTACCAGCACTGCCATTCTGTCCCGTCTTGAAACATCATGCCCTGGTTGCCCTCTCCTGGAATAGGGCAGTATATTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570191.5
CDS GCA 90 bp TACAGGAATTACCACCCTAAAACTGGATGCACCCAGCCATTAGCCTaGTTCTCTCCCTCACTACCCAGCGAACCTCTAAAGCACAGGAAT +
Preference number: 5 (lower is better)
Translates to: YRNYHPKTGCTQPLA*FSPSLPSEPLKHRN
Trigger: ATTCCTGTGCTTTAGAGGTTCGCTGGGTAGTGAGGGAGAGAAGCAGGCTAATGGCTGGGTGCATCCAGTTTTAGGGTGGTAATTCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564566.1
CDS-3UTR CAA 90 bp AATGTAGCACCAGTTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACACTGGTGTCTATCATGGGTGTaGACGTACAAGGCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: NVAPVPFIDQPTGLQRHWCLSWV*TYKAFA
Trigger: TGCAAAGGCCTTGTACGTCAACACCCATGATAGACA...CCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS GCA 90 bp TGTTGTTCACACTTGTGTTACAGGAATTACCACCCTAAAACTGGATaGACCCAGCCATTAGCCTGCTTCTCTCCCTCACTACCCAGCGAA +
Preference number: 5 (lower is better)
Translates to: CCSHLCYRNYHPKTG*TQPLACFSPSLPSE
Trigger: TTCGCTGGGTAGTGAGGGAGAGAAGCAGGCTAATGGCTGGGTGCATCCAGTTTTAGGGTGGTAATTCCTGTAACACAAGTGTGAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564566.1
CDS-3UTR CAA 90 bp AGCATTAATGTAGCACCAGTTCCCTTTATTGATCAGCCCACGGGGTTGCAACGATTGACCGAGTGGTTTTaGGGGCCGTTGGAAATCGTA +
Preference number: 5 (lower is better)
Translates to: SINVAPVPFIDQPTGLQRLTEWF*GPLEIV
Trigger: TACGATTTCCAACGGCCCCAAAAACCACTCGGTCAA...TCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATTAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS TCA 90 bp GATAGTACAGATGATTTGCCAAGGAGAAAGGACAATCTTCCAGTCTaGGGAGTCCAGGAGGAACTGGCATATCTGCCCTATTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: DSTDDLPRRKDNLPV*GVQEELAYLPYSRR
Trigger: TCTCCTGGAATAGGGCAGATATGCCAGTTCCTCCTGGACTCCTCAGACTGGAAGATTGTCCTTTCTCCTTGGCAAATCATCTGTACTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569511.5
CDS TCA 90 bp AAGCAACATCATCAAAACTCCCCCACCTCCCACCTGGCTGAATGTTaGGAATGGCATAGGTGTAAAGACACTATCTTCCCAACAAGACTG +
Preference number: 5 (lower is better)
Translates to: KQHHQNSPTSHLAEC*EWHRCKDTIFPTRL
Trigger: CAGTCTTGTTGGGAAGATAGTGTCTTTACACCTATGCCATTCTCAACATTCAGCCAGGTGGGAGGTGGGGGAGTTTTGATGATGTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566378.1
CDS CCA 90 bp TTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACACTGGTTTATaGATTAGGGTTACATTCTCCAGCAACTCTCAACTGAAGATCGAG +
Preference number: 5 (lower is better)
Translates to: FPLLISPRGCNDTGL*IRVTFSSNSQLKIE
Trigger: CTCGATCTTCAGTTGAGAGTTGCTGGAGAATGTAACCCTAATCCATAAACCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS CCA 90 bp TTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACACTGGTTTATaGATTAGGGTTACATTCTCCAGCAACTCTGCAATCTTTATGGCT +
Preference number: 5 (lower is better)
Translates to: FPLLISPRGCNDTGL*IRVTFSSNSAIFMA
Trigger: AGCCATAAAGATTGCAGAGTTGCTGGAGAATGTAACCCTAATCCATAAACCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219473.12
ENST00000569038.5
ENST00000570191.5
CDS CCA 90 bp TTCCCTTTATTGATCAGCCCACGGGGTTGCAACGACACTGGTTTATaGATTAGGGTTACATTCTCCAGCAACTCATCAGGTAGTTTATCC +
Preference number: 5 (lower is better)
Translates to: FPLLISPRGCNDTGL*IRVTFSSNSSGSLS
Trigger: GGATAAACTACCTGATGAGTTGCTGGAGAATGTAACCCTAATCCATAAACCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563892.5
CDS TCA 90 bp AAACATCTCTCAGTTTGGAGTGACGTGTACGTAACTGTGATTATCTaGTTAGCAAGCTGTCTTCCTCAATGGACCCATAAACTCCTCCGC +
Preference number: 5 (lower is better)
Translates to: KHLSVWSDVYVTVII*LASCLPQWTHKLLR
Trigger: GCGGAGGAGTTTATGGGTCCATTGAGGAAGACAGCTTGCTAATCAGATAATCACAGTTACGTACACGTCACTCCAAACTGAGAGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564566.1
CDS TCA 72 bp ATATCTGCCCTATTCCAGGAGAGGGCAACCAGGGCATaGTGTTTCAAGACGGGACAGAATGGCAGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: ISALFQERATRA*CFKTGQNGSAG
Trigger: ACCAGCACTGCCATTCTGTCCCGTCTTGAAACATCATGCCCTGGTTGCCCTCTCCTGGAATAGGGCAGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569511.5
CDS TCA 72 bp TATACTGCCCTATTCCAGGAGAGGGCAACCAGGGCATaGTGTTTCAAGACGGGACAGAATGGCAGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: YTALFQERATRA*CFKTGQNGSAG
Trigger: ACCAGCACTGCCATTCTGTCCCGTCTTGAAACATCATGCCCTGGTTGCCCTCTCCTGGAATAGGGCAGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570191.5
CDS TCA 72 bp GATGATTTGCCAAGGAGAAAGGACAATCTTCCAGTCTaGGGAGTCCAGGAGGAACTGGCATATCTGCGGGCT +
Preference number: 6 (lower is better)
Translates to: DDLPRRKDNLPV*GVQEELAYLRA
Trigger: AGCCCGCAGATATGCCAGTTCCTCCTGGACTCCTCAGACTGGAAGATTGTCCTTTCTCCTTGGCAAATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562092.1
CDS TCA 72 bp GATGATTTGCCAAGGAGAAAGGACAATCTTCCAGTCTaGGGAGTCCAGGAGGAACTGGCATATCTGCCCTAT +
Preference number: 6 (lower is better)
Translates to: DDLPRRKDNLPV*GVQEELAYLPY
Trigger: ATAGGGCAGATATGCCAGTTCCTCCTGGACTCCTCAGACTGGAAGATTGTCCTTTCTCCTTGGCAAATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569511.5
CDS TCA 72 bp CATCAAAACTCCCCCACCTCCCACCTGGCTGAATGTTaGGAATGGCATAGGTGTAAAGACACTATCTTCCCA +
Preference number: 6 (lower is better)
Translates to: HQNSPTSHLAEC*EWHRCKDTIFP
Trigger: TGGGAAGATAGTGTCTTTACACCTATGCCATTCTCAACATTCAGCCAGGTGGGAGGTGGGGGAGTTTTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566378.1
CDS CCA 72 bp TTGATCAGCCCACGGGGTTGCAACGACACTGGTTTATaGATTAGGGTTACATTCTCCAGCAACTCTGCAATC +
Preference number: 6 (lower is better)
Translates to: LISPRGCNDTGL*IRVTFSSNSAI
Trigger: GATTGCAGAGTTGCTGGAGAATGTAACCCTAATCCATAAACCAGTGTCGTTGCAACCCCGTGGGCTGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219473.12
ENST00000569038.5
ENST00000570191.5
CDS CCA 72 bp TTGATCAGCCCACGGGGTTGCAACGACACTGGTTTATaGATTAGGGTTACATTCTCCAGCAACTCTCAACTG +
Preference number: 6 (lower is better)
Translates to: LISPRGCNDTGL*IRVTFSSNSQL
Trigger: CAGTTGAGAGTTGCTGGAGAATGTAACCCTAATCCATAAACCAGTGTCGTTGCAACCCCGTGGGCTGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563048.5
CDS CCA 72 bp TTGATCAGCCCACGGGGTTGCAACGACACTGGTTTATaGATTAGGGTTACATTCTCCAGCAACTCATCAGGT +
Preference number: 6 (lower is better)
Translates to: LISPRGCNDTGL*IRVTFSSNSSG
Trigger: ACCTGATGAGTTGCTGGAGAATGTAACCCTAATCCATAAACCAGTGTCGTTGCAACCCCGTGGGCTGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563892.5
CDS CAA 72 bp CCTTGCCTGAGATTCCACAAACAAAATGGAACAGGATaGGAACCTGAGGCTGACCTCAAGGCACAGACACAT +
Preference number: 6 (lower is better)
Translates to: PCLRFHKQNGTG*EPEADLKAQTH
Trigger: ATGTGTCTGTGCCTTGAGGTCAGCCTCAGGTTCCAATCCTGTTCCATTTTGTTTGTGGAATCTCAGGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569511.5
CDS CAA 72 bp GAACGGTTCTCTGACTTCAGATTGTGTTCCCTTCCTTaGGGAAACATCTCTCAGTTTGGAGTGACGTGTACG +
Preference number: 6 (lower is better)
Translates to: ERFSDFRLCSLP*GNISQFGVTCT
Trigger: CGTACACGTCACTCCAAACTGAGAGATGTTTCCCAAAGGAAGGGAACACAATCTGAAGTCAGAGAACCGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564566.1