RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000176542

Ensembl transcript IDs: ENST00000316407.9, ENST00000478658.1, ENST00000491165.5, ENST00000496826.1

Found 967 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTaGAAAGATCTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTC +
Preference number: 1 (lower is better)
Translates to: GTVSGKVQEQGRGYR*KDLEALCPTRSSRF
Trigger: GAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAGATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR TCA 90 bp GTACCATCCCAGCTGGCCCTTTGCTATAACAGAGGAGTGGGTGAGTaGTATGTTCCAACAGCTGGTCTAAAGACCAGAGGCACAGTTTCA +
Preference number: 1 (lower is better)
Translates to: VPSQLALCYNRGVGE*YVPTAGLKTRGTVS
Trigger: TGAAACTGTGCCTCTGGTCTTTAGACCAGCTGTTGGAACATATCACTCACCCACTCCTCTGTTATAGCAAAGGGCCAGCTGGGATGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR GCA 90 bp CACAGATTAACTTCACTAGTTTGTCTGGTTGTTGGCTATTACTGTTaGCCTCTGGATGTACACAGCCACAGGCGCACTACCTCCAGGCAA +
Preference number: 1 (lower is better)
Translates to: HRLTSLVCLVVGYYC*PLDVHSHRRTTSRQ
Trigger: TTGCCTGGAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACAACCAGACAAACTAGTGAAGTTAATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR CCA 90 bp CAATTATGTCTAGCAGTCCCCAGTCCTTCAGAACTTAACAGCCACTaGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: QLCLAVPSPSELNSH*RERERERECVCVCV
Trigger: CACACACACACACACACACTCTCTCTCTCTCTCTCTCTCTCTCCAGTGGCTGTTAAGTTCTGAAGGACTGGGGACTGCTAGACATAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR TCA 90 bp AAGGCAACAGTGAGAAACATCAGCTGTACTTGTCGAGAAGGTGTCTaGTTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACA +
Preference number: 1 (lower is better)
Translates to: KATVRNISCTCREGV*LHSVYHPSWPFAIT
Trigger: TGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTGATGTTTCTCACTGTTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR TCA 90 bp TACAAATCAACATCAAAGATGGCTCAGAGAATGGTAAGGCAACAGTaGGAAACATCAGCTGTACTTGTCGAGAAGGTGTCTGATTACACA +
Preference number: 1 (lower is better)
Translates to: YKSTSKMAQRMVRQQ*ETSAVLVEKVSDYT
Trigger: TGTGTAATCAGACACCTTCTCGACAAGTACAGCTGATGTTTCTCACTGTTGCCTTACCATTCTCTGAGCCATCTTTGATGTTGATTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR GCA 90 bp AACCCAAGTTGGCTCACGTTTATGAAGCATCTGACCACATACGCGTaGCAGAAAAAGATTACAGTTGGTACAGTTTGTGTAAATCTAGAA +
Preference number: 1 (lower is better)
Translates to: NPSWLTFMKHLTTYA*QKKITVGTVCVNLE
Trigger: TTCTAGATTTACACAAACTGTACCAACTGTAATCTTTTTCTGGCACGCGTATGTGGTCAGATGCTTCATAAACGTGAGCCAACTTGGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR TCA 90 bp CCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTaGAAACTGATTATACAGACACACACACACAATCCTTCTCTTCAT +
Preference number: 1 (lower is better)
Translates to: PVSASDMASLHSEDN*KLIIQTHTHNPSLH
Trigger: ATGAAGAGAAGGATTGTGTGTGTGTGTCTGTATAATCAGTTTTCAGTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
3UTR CCA 90 bp GTAACACAACTGCAGCATCTTAACACTATCTGGTCCCTTTCTTCTTaGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTATAGT +
Preference number: 1 (lower is better)
Translates to: VTQLQHLNTIWSLSS*KINSSTPLNCYHYS
Trigger: ACTATAGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTTAAGATGCTGCAGTTGTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR CCA 90 bp AAAGTAATGAGAGCTACACGTAAGCAGGAGCCAATTATTCACAGATaGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGACT +
Preference number: 1 (lower is better)
Translates to: KVMRATRKQEPIIHR*SHFSSDGQIRLIET
Trigger: AGTCTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAATTGGCTCCTGCTTACGTGTAGCTCTCATTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR CCA 90 bp AATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCTaGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAAC +
Preference number: 1 (lower is better)
Translates to: NLFFTVTQLQHLNTI*SLSSWKINSSTPLN
Trigger: GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR TCA 90 bp GGCTTATTGAGACTCTTTCAAGATCAAAATGTTAGACTGTTGGAATaGAAGCTCCAAGAAATGCAAATACTATGTCTGAACACAGCTAAG +
Preference number: 1 (lower is better)
Translates to: GLLRLFQDQNVRLLE*KLQEMQILCLNTAK
Trigger: CTTAGCTGTGTTCAGACATAGTATTTGCATTTCTTGGAGCTTTCATTCCAACAGTCTAACATTTTGATCTTGAAAGAGTCTCAATAAGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR TCA 90 bp TCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTaGGACTCTTTCAAGATCAAAATGTTAGACTGTTGGAATGAAAGC +
Preference number: 1 (lower is better)
Translates to: SQMVTFFLRWSNKAY*DSFKIKMLDCWNES
Trigger: GCTTTCATTCCAACAGTCTAACATTTTGATCTTGAAAGAGTCTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR TCA 90 bp TACAGTTGGTACAGTTTGTGTAAATCTAGAAATAAGGATGTTGAATaGCCACCACATACAAGCTCTGAGTTTAACAGGAGTTTTGCTACT +
Preference number: 1 (lower is better)
Translates to: YSWYSLCKSRNKDVE*PPHTSSEFNRSFAT
Trigger: AGTAGCAAAACTCCTGTTAAACTCAGAGCTTGTATGTGGTGGTCATTCAACATCCTTATTTCTAGATTTACACAAACTGTACCAACTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTaGACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCT +
Preference number: 1 (lower is better)
Translates to: ENTKLNSADETSIVN*THAKLHNTTNCFYP
Trigger: AGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
3UTR CAA 90 bp TCACAGATTAACTTCACTAGTTTGTCTGGTTGTTGGCTATTACTGTaGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SQINFTSLSGCWLLL*PSGCTQPQAHYLQA
Trigger: TGCCTGGAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACAACCAGACAAACTAGTGAAGTTAATCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR-3UTR TCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCAGAAAAGCTGGTCCTTaGGTTCACTTTGTTAACAAG +
Preference number: 2 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLRKAGP*VHFVNK
Trigger: CTTGTTAACAAAGTGAACTCAAGGACCAGCTTTTCT...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR-3UTR CCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCACCCCATCCCATTTTTaGCAGAATATAACAAGAACA +
Preference number: 2 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLTPSHF*QNITRT
Trigger: TGTTCTTGTTATATTCTGCCAAAAATGGGATGGGGT...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR-3UTR CCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATGAGCCCTATTTCACATaGAGCAGGCCAAGAATAAGG +
Preference number: 2 (lower is better)
Translates to: QGILVPKAKTWESLIWEYEPYFT*SRPRIR
Trigger: CCTTATTCTTGGCCTGCTCCATGTGAAATAGGGCTC...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCTACTACCCAGTACATaGCAAGATGATCTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: EAVLDADISQHLIMSHCVLLPST*QDDLPQ
Trigger: TTGGGGGAGATCATCTTGTCATGTACTGGGTAGTAG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
3UTR-3UTR TCA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCCTTATCAGCATGGACTaGCTCAATCTAAATTTGGTG +
Preference number: 2 (lower is better)
Translates to: AQFQVKCRNRVEATGGKILISMD*LNLNLV
Trigger: CACCAAATTTAGATTGAGTCAGTCCATGCTGATAAG...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCAGTACATGACAAGATaGTCTCCCCCAATTTCCAGC +
Preference number: 2 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMQYMTR*SPPISS
Trigger: GCTGGAAATTGGGGGAGATCATCTTGTCATGTACTG...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
3UTR-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATCAGTACATGACAAGATaGTCTCCCCCAATTTCCAGC +
Preference number: 2 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYQYMTR*SPPISS
Trigger: GCTGGAAATTGGGGGAGATCATCTTGTCATGTACTG...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
3UTR-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAAGTACACCATGCAGTTaGAAACGAAAGATAACTTGT +
Preference number: 2 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRSTPCS*KRKITC
Trigger: ACAAGTTATCTTTCGTTTTCAACTGCATGGTGTACT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
3UTR-3UTR TCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCTGCTTTTACCCTTATaGCCCGATGCAAAATGCAAG +
Preference number: 2 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLLLLPL*PDAKCK
Trigger: CTTGCATTTTGCATCGGGTCATAAGGGTAAAAGCAG...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR-3UTR TCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATAGAGGAGTGGGTGAGTaGTATGTTCCAACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHRGVGE*YVPTAG
Trigger: ACCAGCTGTTGGAACATATCACTCACCCACTCCTCT...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR-3UTR TCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGAGACTCCAGCCTGGGTaGCAAAGTGACCTTGAATAT +
Preference number: 2 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIERLQPG*QSDLEY
Trigger: ATATTCAAGGTCACTTTGTCACCCAGGCTGGAGTCT...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR-3UTR GCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATACATGTCTGTGCACATaGACGCACAAATACATTTGT +
Preference number: 2 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNTCLCT*THKYIC
Trigger: ACAAATGTATTTGTGCGTGCATGTGCACAGACATGT...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR-3UTR GCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATCAGTTTCAGGTAAAGTaGAGGAACAGGGTAGAGGCT +
Preference number: 2 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHQFQVK*RNRVEA
Trigger: AGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTG...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTATCTGCATCTGACATaGCTTCCCTACATTCAGAAG +
Preference number: 2 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYYLHLT*LPYIQK
Trigger: CTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
3UTR-3UTR TCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATAGACTTGGGAATCACTaGTTTGGGAGTATGACTCAC +
Preference number: 2 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHRLGNH*FGSMTH
Trigger: GTGAGTCATACTCCCAAATCAGTGATTCCCAAGTCT...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR-3UTR CCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGTATCTGCATCTGACATaGCTTCCCTACATTCAGAAG +
Preference number: 2 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLYLHLT*LPYIQK
Trigger: CTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATA...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTACATGTCTGTGCACATaGACGCACAAATACATTTGT +
Preference number: 2 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSTCLCT*THKYIC
Trigger: ACAAATGTATTTGTGCGTGCATGTGCACAGACATGT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
3UTR-3UTR GCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATATGGAAGAGCATAAGTaGCTACCTATCAAAGGGAAG +
Preference number: 2 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHMEEHK*LPIKGK
Trigger: CTTCCCTTTGATAGGTAGGCACTTATGCTCTTCCAT...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR-3UTR GCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGCACAATACAACTAACTaGTTTTACCCTTATGACCCG +
Preference number: 2 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIEHNTTN*FYPYDP
Trigger: CGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTG...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR-3UTR GCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATCTAATGACAGGATTATaGAGTCATCCAAAATTCCCC +
Preference number: 2 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHLMTGL*SHPKFP
Trigger: GGGGAATTTTGGATGACTGCATAATCCTGTCATTAG...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR CAA 90 bp AAGATTACAGTTGGTACAGTTTGTGTAAATCTAGAAATAAGGATGTaGAATGACCACCACATACAAGCTCTGAGTTTAACAGGAGTTTTG +
Preference number: 2 (lower is better)
Translates to: KITVGTVCVNLEIRM*NDHHIQALSLTGVL
Trigger: CAAAACTCCTGTTAAACTCAGAGCTTGTATGTGGTGGTCATTCAACATCCTTATTTCTAGATTTACACAAACTGTACCAACTGTAATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR TCA 72 bp CAGCTGGCCCTTTGCTATAACAGAGGAGTGGGTGAGTaGTATGTTCCAACAGCTGGTCTAAAGACCAGAGGC +
Preference number: 3 (lower is better)
Translates to: QLALCYNRGVGE*YVPTAGLKTRG
Trigger: GCCTCTGGTCTTTAGACCAGCTGTTGGAACATATCACTCACCCACTCCTCTGTTATAGCAAAGGGCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR CCA 72 bp CTAGCAGTCCCCAGTCCTTCAGAACTTAACAGCCACTaGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LAVPSPSELNSH*RERERERECVC
Trigger: ACACACACACTCTCTCTCTCTCTCTCTCTCTCTCCAGTGGCTGTTAAGTTCTGAAGGACTGGGGACTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR TCA 72 bp GTGAGAAACATCAGCTGTACTTGTCGAGAAGGTGTCTaGTTACACAGCGTGTACCATCCCAGCTGGCCCTTT +
Preference number: 3 (lower is better)
Translates to: VRNISCTCREGV*LHSVYHPSWPF
Trigger: AAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTGATGTTTCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR GCA 72 bp ACTTCACTAGTTTGTCTGGTTGTTGGCTATTACTGTTaGCCTCTGGATGTACACAGCCACAGGCGCACTACC +
Preference number: 3 (lower is better)
Translates to: TSLVCLVVGYYC*PLDVHSHRRTT
Trigger: GGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACAACCAGACAAACTAGTGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR CCA 72 bp TCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTaGAAAGATCTAGAAGCTCTGTGTCCAACAAGGTCC +
Preference number: 3 (lower is better)
Translates to: SGKVQEQGRGYR*KDLEALCPTRS
Trigger: GGACCTTGTTGGACACAGAGCTTCTAGATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR-3UTR CAA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCGACATTAGCCAGCACTaGATTATGAGCCACTGTGTT +
Preference number: 3 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIDISQH*IMSHCV
Trigger: AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTC...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR CCA 72 bp AGAATACGAGGCATACTGGTTCCCAAAGCCAAGACTTaGGAATCACTGATTTGGGAGTATGACTTACCACCA +
Preference number: 3 (lower is better)
Translates to: RIRGILVPKAKT*ESLIWEYDLPP
Trigger: TGGTGGTAAGTCATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTCGTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR GCA 72 bp GCCCTATTTGACATGGAGCAGATGGAAGAGCATAAGTaGCTACCTATCAAAGGGAAGATAAAGCTAAGAAGA +
Preference number: 3 (lower is better)
Translates to: ALFDMEQMEEHK*LPIKGKIKLRR
Trigger: TCTTCTTAGCTTTATCTTCCCTTTGATAGGTAGGCACTTATGCTCTTCCATCTGCTCCATGTCAAATAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR GCA 72 bp TGGCTCACGTTTATGAAGCATCTGACCACATACGCGTaGCAGAAAAAGATTACAGTTGGTACAGTTTGTGTA +
Preference number: 3 (lower is better)
Translates to: WLTFMKHLTTYA*QKKITVGTVCV
Trigger: TACACAAACTGTACCAACTGTAATCTTTTTCTGGCACGCGTATGTGGTCAGATGCTTCATAAACGTGAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR GCA 72 bp GCTGAGTCTTTAGAAGAGGTATTCACTGGAGTTAACTaGTCTGACCAACCCTTAGGAAGCTTTTTAGGATTA +
Preference number: 3 (lower is better)
Translates to: AESLEEVFTGVN*SDQPLGSFLGL
Trigger: TAATCCTAAAAAGCTTCCTAAGGGTTGGTCAGAGCAGTTAACTCCAGTGAATACCTCTTCTAAAGACTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR CCA 72 bp AGAGCTACACGTAAGCAGGAGCCAATTATTCACAGATaGTCACATTTTTCCTCAGATGGTCAAATAAGGCTT +
Preference number: 3 (lower is better)
Translates to: RATRKQEPIIHR*SHFSSDGQIRL
Trigger: AAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAATTGGCTCCTGCTTACGTGTAGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR CCA 72 bp CTGCAGCATCTTAACACTATCTGGTCCCTTTCTTCTTaGAAGATCAATAGTTCAACTCCCCTTAACTGTTAC +
Preference number: 3 (lower is better)
Translates to: LQHLNTIWSLSS*KINSSTPLNCY
Trigger: GTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTTAAGATGCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTAAGTACACCATGCAGTaGAAAACGAAAGATAACTTG +
Preference number: 3 (lower is better)
Translates to: EAVLDADISQHLIMSHCVKYTMQ*KTKDNL
Trigger: CAAGTTATCTTTCGTTTTCAACTGCATGGTGTACTT...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
3UTR TCA 72 bp GCATCTGACATGGCTTCCCTACATTCAGAAGATAACTaGAAACTGATTATACAGACACACACACACAATCCT +
Preference number: 3 (lower is better)
Translates to: ASDMASLHSEDN*KLIIQTHTHNP
Trigger: AGGATTGTGTGTGTGTGTCTGTATAATCAGTTTTCAGTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
3UTR TCA 72 bp CTTCAGGGGTGGGAGCACAGAGAAGTCTTAGAAAAGTaGAGGGATTTAGATACATCTAACTTTAAGTTCCTA +
Preference number: 3 (lower is better)
Translates to: LQGWEHREVLEK*RDLDTSNFKFL
Trigger: TAGGAACTTAAAGTTAGATGTATCTAAATCCCTTCACTTTTCTAAGACTTCTCTGTGCTCCCACCCCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR CCA 72 bp TTCACAGTAACACAACTGCAGCATCTTAACACTATCTaGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACT +
Preference number: 3 (lower is better)
Translates to: FTVTQLQHLNTI*SLSSWKINSST
Trigger: AGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR GCA 72 bp AAATTAAACTCAGCTGATGAAACATCCATTGTTAACTaGACCCATGCAAAACTCCACAATACAACTAACTGC +
Preference number: 3 (lower is better)
Translates to: KLNSADETSIVN*THAKLHNTTNC
Trigger: GCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
3UTR CCA 72 bp TCTGACCACATACGCGTGCCAGAAAAAGATTACAGTTaGTACAGTTTGTGTAAATCTAGAAATAAGGATGTT +
Preference number: 3 (lower is better)
Translates to: SDHIRVPEKDYS*YSLCKSRNKDV
Trigger: AACATCCTTATTTCTAGATTTACACAAACTGTACCAACTGTAATCTTTTTCTGGCACGCGTATGTGGTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR-3UTR CAA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATGTCCTTGAGTTCACTTaGTTAACAAGGCAGATAAAA +
Preference number: 3 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHVLEFT*LTRQIK
Trigger: TTTTATCTGCCTTGTTAACAAAGTGAACTCAAGGAC...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR TCA 72 bp TGGAATGAAAGCTCCAAGAAATGCAAATACTATGTCTaGACACAGCTAAGCAGGAAAATACAATTAATGCAA +
Preference number: 3 (lower is better)
Translates to: WNESSKKCKYYV*TQLSRKIQLMQ
Trigger: TTGCATTAATTGTATTTTCCTGCTTAGCTGTGTTCAGACATAGTATTTGCATTTCTTGGAGCTTTCATTCCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR TCA 72 bp AGACTCTTTCAAGATCAAAATGTTAGACTGTTGGAATaGAAGCTCCAAGAAATGCAAATACTATGTCTGAAC +
Preference number: 3 (lower is better)
Translates to: RLFQDQNVRLLE*KLQEMQILCLN
Trigger: GTTCAGACATAGTATTTGCATTTCTTGGAGCTTTCATTCCAACAGTCTAACATTTTGATCTTGAAAGAGTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR TCA 72 bp CAGGACCTATTCTTATTTACAACTGTAGGACAATCCTaGTCATATTATACATATCTGCTCTGGATTCCATTA +
Preference number: 3 (lower is better)
Translates to: QDLFLFTTVGQS*SYYTYLLWIPL
Trigger: TAATGGAATCCAGAGCAGATATGTATAATATGATCAGGATTGTCCTACAGTTGTAAATAAGAATAGGTCCTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAACCCCCGCCTGGGTCATaGTCCCAGGAGGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKPPPGS*SQEGKA
Trigger: TGCCTTCCCCTCCTGGGATCATGACCCAGGCGGGGG...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATGCGGCGACCCCCGCCTaGGTCATGATCCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYAATPA*VMIPGG
Trigger: CCCTCCTGGGATCATGACCCAGGCGGGGGTCGCCGC...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTGGCCACCGCAGCCGCTaGGAGCCCGAGCCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTGHRSR*EPEPSR
Trigger: CCTTGAGGGCTCGGGCTCGCAGCGGCTGCGGTGGCC...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACACTGCCAGAGCTGGTTaGCATGGGAGAGTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDTARAG*HGRVGL
Trigger: CAGGCCGACTCTCCCATGTCAACCAGCTCTGGCAGT...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTCCCGCCGCCTCTTTTTaGGGCCACCGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTPAASF*GHRSRC
Trigger: GCAGCGGCTGCGGTGGCCGCAAAAAGAGGCGGCGGG...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTCTTCTTACCGCCGGCTaGGCGGTCTCGGCCGCGGTG +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFLLTAG*AVSAAV
Trigger: CACCGCGGCCGAGACCGCGCAGCCGGCGGTAAGAAG...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCGAAGGCAGGAGTGTCTaGCCGTCTGGGCGAATCTCT +
Preference number: 4 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIEGRSV*PSGRIS
Trigger: AGAGATTCGCCCAGACGGTCAGACACTCCTGCCTTC...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCCTGCTGTTCAGCAACTaGAGGCTGAGAACCACACTG +
Preference number: 4 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLLLFSN*RLRTTL
Trigger: CAGTGTGGTTCTCAGCCTTCAGTTGCTGAACAGCAG...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCCATGCATGTTGGTTGTaGCTGGAGGGTTCATGTGGC +
Preference number: 4 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLHACWL*LEGSCG
Trigger: GCCACATGAACCCTCCAGTCACAACCAACATGCATG...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCCCCGCCGCCTCTTTTTaGGGCCACCGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVPAASF*GHRSRC
Trigger: GCAGCGGCTGCGGTGGCCGCAAAAAGAGGCGGCGGG...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCGAGGGCAGAGTATTTTaGGGATCTACCGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLEGRVF*GSTGMR
Trigger: CCTCATCCCGGTAGATCCGCAAAATACTCTGCCCTC...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCAAGTCCTCTGTACTaGCACCACATTGGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLASPLY*HHIGGL
Trigger: CAGACCGCCAATGTGGTGCCAGTACAGAGGACTTGC...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTGCCCTCATCACTGTTaGGCATGGGGTGGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDCPHHC*AWGGAR
Trigger: CCTAGCACCACCCCATGCCCAACAGTGATGAGGGCA...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGCAGAGCTGGTTGACATaGGAGAGTCGGCCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLQSWLT*ESRPVY
Trigger: GTAGACAGGCCGACTCTCCCATGTCAACCAGCTCTG...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGATACCGGGATGAGGGCTaGAGTTCGAGTGGCACTAGG +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRYRDEG*SSSGTR
Trigger: CCTAGTGCCACTCGAACTCCAGCCCTCATCCCGGTA...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATCCCCCGCCTGGGTCATaGTCCCAGGAGGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNPPPGS*SQEGKA
Trigger: TGCCTTCCCCTCCTGGGATCATGACCCAGGCGGGGG...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCTACTCCAGGGGCAGATaGTGCCACCACTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIYSRGR*CHHCSC
Trigger: ACAGCTACAGTGGTGGCATCATCTGCCCCTGGAGTA...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTGCGGATCTACCGGGATaGGGGCTGGAGTTCGAGTGG +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVADLPG*GLEFEW
Trigger: CCACTCGAACTCCAGCCCTCATCCCGGTAGATCCGC...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCAGAGGAGTGGGTGAGTaGTATGTTCCAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLRGVGE*YVPTAG
Trigger: ACCAGCTGTTGGAACATATCACTCACCCACTCCTCT...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCGAAACCCCTGAACCTTaGTGTCTGCTTCCAACATCC +
Preference number: 4 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLETPEP*CLLPTS
Trigger: GGATGTTGGAAGCAGACAGCAAGGTTCAGGGGTTTC...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGATGGCAACGCTGGCCTTaGAACCCCATGCATGTTGGT +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRWQRWP*NPMHVG
Trigger: ACCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCA...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCCCAATGCAGGAACTGTaGTCTGATGCCATGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLPMQEL*SDAMAC
Trigger: ACAAGCCATGGCATCAGACCACAGTTCCTGCATTGG...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCGCCACATATCTACTGTaGTTGCTTGTGGTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLATYLL*LLVVGL
Trigger: TAGCCCCACCACAAGCAACCACAGTAGATATGTGGC...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCAGGAACTGTGGTCTaGTGCCATGGCTTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLAGTVV*CHGLFS
Trigger: TGAAAACAAGCCATGGCATCAGACCACAGTTCCTGC...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAACAGGGTGGCTCTGCTaGGCCTTCAGTGTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRTGWLC*AFSVGA
Trigger: TGCCCCAACACTGAAGGCTCAGCAGAGCCACCCTGT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACACTGCCAGAGCTGGTTaGCATGGGAGAGTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNTARAG*HGRVGL
Trigger: CAGGCCGACTCTCCCATGTCAACCAGCTCTGGCAGT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGATGGCCCTTGGTGGCATaGCTCTCAGTAATCCTCATG +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRWPLVA*LSVILM
Trigger: CATGAGGATTACTGAGAGTCATGCCACCAAGGGCCA...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCAGAAACTACGACTACTaGCAGAGCTGGTTGACATGG +
Preference number: 4 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLRNYDY*QSWLTW
Trigger: CCATGTCAACCAGCTCTGGCAGTAGTCGTAGTTTCT...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCCATTTCCTGTTGGGATaGTCTGAACTGGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLHFLLG*SELVGK
Trigger: CTTACCCACCAGTTCAGAGCATCCCAACAGGAAATG...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGGCGGCGACCCCCGCCTaGGTCATGATCCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLAATPA*VMIPGG
Trigger: CCCTCCTGGGATCATGACCCAGGCGGGGGTCGCCGC...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGGTCATGTGCATTGGTaGCATATCTGGGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLGHVHW*HIWEKR
Trigger: CCTCTTCTCCCAGATATGCCACCAATGCACATGACC...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACAGGGCCTGTAGATGCTaGCTTGCCTGGGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNRACRC*LAWVCC
Trigger: GCAGCAAACCCAGGCAAGTCAGCATCTACAGGCCCT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATCTTCTTACCGCCGGCTaGGCGGTCTCGGCCGCGGTG +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHLLTAG*AVSAAV
Trigger: CACCGCGGCCGAGACCGCGCAGCCGGCGGTAAGAAG...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGTGTTTCCTGCCAGTTaGAAAGTAGTCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLVFPAS*KVVHVV
Trigger: GACAACGTGGACTACTTTGCAACTGGCAGGAAACAC...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGCAGTTTCAGGTAAAGTaGAGGAACAGGGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLQFQVK*RNRVEA
Trigger: AGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTG...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGACATCACTGTTGGGCATaGGGTGGTGCTAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRHHCWA*GGARWL
Trigger: CAGCCACCTAGCACCACCCCATGCCCAACAGTGATG...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGGCAACATTGGTATTTaGATCTTCGCTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKGNIGI*IFAGGG
Trigger: CCCACCACCAGCGAAGATCCAAATACCAATGTTGCC...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTGGTGGGGATGTGGCTaGCCAGTCTTGGATCGGGAT +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVWWGCG*PVLDRD
Trigger: ATCCCGATCCAAGACTGGCCAGCCACATCCCCACCA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGACATGTTGGTTGTGACTaGAGGGTTCATGTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRHVGCD*RVHVAL
Trigger: AAGGGCCACATGAACCCTCCAGTCACAACCAACATG...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTACCGGGATGAGGGCTaGAGTTCGAGTGGCACTAGG +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNYRDEG*SSSGTR
Trigger: CCTAGTGCCACTCGAACTCCAGCCCTCATCCCGGTA...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACGTGTACCATCCCAGCTaGCCCTTTGCTATAACAGAG +
Preference number: 4 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDVYHPS*PFAITE
Trigger: CTCTGTTATAGCAAAGGGCCAGCTGGGATGGTACAC...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGTTTGAAAATCACCTCTaGAGTCCTGTATGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLFENHL*SPVCSG
Trigger: GCCTGAGCATACAGGACTTCAGAGGTGATTTTCAAA...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCAAGCATGGATGCAACTaGGAAACTACGACTACTGCC +
Preference number: 4 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIKHGCN*ETTTTA
Trigger: GGCAGTAGTCGTAGTTTCTCAGTTGCATCCATGCTT...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCGCCATAGGAGCTAGATaGAACGGTCAGATTAACCGT +
Preference number: 4 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIAIGAR*NGQINR
Trigger: ACGGTTAATCTGACCGTTTCATCTAGCTCCTATGGC...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACGTAAGGCCATCTCCATaGGCTGGGTTGCTAACAGGC +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNVRPSP*AGLLTG
Trigger: GCCTGTTAGCAACCCAGCTCATGGAGATGGCCTTAC...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTTGTTGCTGCATCTGCTaGTGGTGGGGATGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTCCCIC*WWGCGW
Trigger: CCAGCCACATCCCCACCATCAGCAGATGCAGCAACA...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGACACTGTGTATTCCTCTaGTGTTCTGAGAGTGACCTC +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRHCVFL*CSESDL
Trigger: GAGGTCACTCTCAGAACATCAGAGGAATACACAGTG...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCCGATTCCTTTCAGGCTaGCGAATTTTGGAACCACTG +
Preference number: 4 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIRFLSG*RILEPL
Trigger: CAGTGGTTCCAAAATTCGTCAGCCTGAAAGGAATCG...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCGGATCTACCGGGATaGGGGCTGGAGTTCGAGTGG +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYADLPG*GLEFEW
Trigger: CCACTCGAACTCCAGCCCTCATCCCGGTAGATCCGC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCTGCAACAGAAATACTTaGAAGTCACAGGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLCNRNT*KSQALR
Trigger: CCTCAAAGCCTGTGACTTTCAAGTATTTCTGTTGCA...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAATTCCTGGCTTCCAATaGCTCCCGTTTCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKIPGFQ*LPFLIQ
Trigger: TTGGATCAGAAACGGGAGGCATTGGAAGCCAGGAAT...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCCTGAACCTTGCTGTCTaGTTCCAACATCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: AQFQVKCRNRVEATGGKILNLAV*FQHPAV
Trigger: AACAGCAGGATGTTGGAAGCAGACAGCAAGGTTCAG...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATGGCAACGCTGGCCTTaGAACCCCATGCATGTTGGT +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRWQRWP*NPMHVG
Trigger: ACCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACGAGTGTCTGACCGTCTaGGCGAATCTCTCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNECLTV*ANLSVR
Trigger: GCGGACGGAGAGATTCGCCCAGACGGTCAGACACTC...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATTCCCTTATATCAGCCTaGAGGCCAACTCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYSLISA*RPTLPF
Trigger: GAAGGGGAGAGTTGGCCTCCAGGCTGATATAAGGGA...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGATCCTTACGGCTTTCATaGCTTGGCTTTAAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRSLRLS*LGFKSG
Trigger: GCCACTCTTAAAGCCAAGCCATGAAAGCCGTAAGGA...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACGTGGCTGGCCAGTCTTaGATCGGGATTGGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNVAGQS*IGIGQF
Trigger: GAACTGACCAATCCCGATCCAAGACTGGCCAGCCAC...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGAATACCATTTCCTGTTaGGATGCTCTGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLNTISC*DALNWW
Trigger: CCACCAGTTCAGAGCATCCCAACAGGAAATGGTATT...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTGGATGTGGCAACGCTaGCCTTGCAACCCCATGCAT +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVWMWQR*PCNPMH
Trigger: ATGCATGGGGTTGCAAGGCCAGCGTTGCCACATCCA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATTCCATGAGACACAGATaGATGTGGCAACGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYSMRHR*MWQRWP
Trigger: AGGCCAGCGTTGCCACATCCATCTGTGTCTCATGGA...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACAACGACACTCCAGCCTaGGTGACAGAGTCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDNDTPA*VTESQK
Trigger: TTTTTGAGACTCTGTCACCCAGGCTGGAGTGTCGTT...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGAGAACTTAACAGCCACTaGAGAGAGAGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRELNSH*RERERE
Trigger: CTCTCTCTCTCTCTCTCTCCAGTGGCTGTTAAGTTC...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGAAAAGGTGCCATCTCTaGTACCGCAAAAGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLKRCHL*YRKRSY
Trigger: GTAAGACCTTTTGCGGTACCAGAGATGGCACCTTTT...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
3UTR CAA 72 bp AACTTCACTAGTTTGTCTGGTTGTTGGCTATTACTGTaGCCCTCTGGATGTACACAGCCACAGGCGCACTAC +
Preference number: 4 (lower is better)
Translates to: NFTSLSGCWLLL*PSGCTQPQAHY
Trigger: GTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACAACCAGACAAACTAGTGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGGCACCAAGCACATTTaGTTCGCTTTCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRGTKHI*FAFRGG
Trigger: CCCACCTCTGAAAGCGAATCAAATGTGCTTGGTGCC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACCTGCTGTTCAGCAACTaGAGGCTGAGAACCACACTG +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNLLFSN*RLRTTL
Trigger: CAGTGTGGTTCTCAGCCTTCAGTTGCTGAACAGCAG...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCAGGGCCTGTAGATGCTaGCTTGCCTGGGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVRACRC*LAWVCC
Trigger: GCAGCAAACCCAGGCAAGTCAGCATCTACAGGCCCT...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATGAGGTCTGGGTGCCCTaGACAAGATTCCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYEVWVP*TRFLFF
Trigger: GAAAAAGAGGAATCTTGTTCAGGGCACCCAGACCTC...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGACCCCATTCTCTGCTCTaGATTAGAAGATGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRPHSLL*IRRCLS
Trigger: GGAAAGACATCTTCTAATTCAGAGCAGAGAATGGGG...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAATGGGCAGGTCTGTTTaGGGACTGCTTGGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRMGRSV*GLLGRV
Trigger: GACTCTTCCAAGCAGTCCTCAAACAGACCTGCCCAT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACGGCAGGAGAATCACTTaGACCCGGGAGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNGRRIT*TREVEL
Trigger: AAGCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCC...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTGGAGAAGAATCACCTaGAGTTCTGGGAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNWRRIT*SSGRLR
Trigger: TCGCAGCCTCCCAGAACTGCAGGTGATTCTTCTCCA...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGCTGAGAGGTCTGGGTaGCCTGAACAAGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRAERSG*PEQDSS
Trigger: AGAGGAATCTTGTTCAGGGCACCCAGACCTCTCAGC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTTGTCCCTAGGAAGCTaGTTAGTTGGCAGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDLSLGS*LVGSRK
Trigger: TTTTCTGCTGCCAACTAAGCAGCTTCCTAGGGACAA...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGATTTAACTTGTGGCTaGGCAATTAGTGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLDLTCG*AISGCI
Trigger: TATGCAGCCACTAATTGCCCAGCCACAAGTTAAATC...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGAATGGAATCAATACATTaGCTGAAGCGCAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRMESIH*LKRRVW
Trigger: CCAAACCCTGCGCTTCAGCCAATGTATTGATTCCAT...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATTTCAGTCATCAGAGATaGTCCAGGAGGTTGACTGCC +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYFSHQR*SRRLTA
Trigger: GGCAGTCAACCTCCTGGACCATCTCTGATGACTGAA...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTGCCATCTCCATGAGCTaGGTTGCTAACAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVAISMS*VANRHN
Trigger: GTTGTGCCTGTTAGCAACCCAGCTCATGGAGATGGC...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGCCATCTCCATGAGCTaGGTTGCTAACAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRAISMS*VANRHN
Trigger: GTTGTGCCTGTTAGCAACCCAGCTCATGGAGATGGC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTCTGAGGCCACAGTATaGTCCACACGACCCTGCATA +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNSEATV*STRPCI
Trigger: TATGCAGGGTCGTGTGGACCATACTGTGGCCTCAGA...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATTTGACGGTCAATTGGTaGGGGGCCAGTGTTTTGACT +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYLTVNW*GASVLT
Trigger: AGTCAAAACACTGGCCCCCCACCAATTGACCGTCAA...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTAGACACAGATGGATGTaGCAACGCTGGCCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVRHRWM*QRWPCN
Trigger: GTTGCAAGGCCAGCGTTGCCACATCCATCTGTGTCT...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTCCATGAGACACAGATaGATGTGGCAACGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVSMRHR*MWQRWP
Trigger: AGGCCAGCGTTGCCACATCCATCTGTGTCTCATGGA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACATATGTTCCAACAGCTaGTCTAAAGACCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDICSNS*SKDQRH
Trigger: GTGCCTCTGGTCTTTAGACCAGCTGTTGGAACATAT...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACATATTTTTGGGAGGCTaGGATTTAACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDIFLGG*DLTCGW
Trigger: CCAGCCACAAGTTAAATCTCAGCCTCCCAAAAATAT...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGACAGTATTGGCTCCATTaGTGGGGAGTCGAACAGAAC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRQYWLH*WGVEQN
Trigger: GTTCTGTTCGACTCCCCATCAATGGAGCCAATACTG...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTACAGGGTGGCTCTGCTaGGCCTTCAGTGTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSTGWLC*AFSVGA
Trigger: TGCCCCAACACTGAAGGCTCAGCAGAGCCACCCTGT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGAGGTCTGGGTGCCCTaGACAAGATTCCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTREVWVP*TRFLFF
Trigger: GAAAAAGAGGAATCTTGTTCAGGGCACCCAGACCTC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTGTTGCTGCATCTGCTaGTGGTGGGGATGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYCCCIC*WWGCGW
Trigger: CCAGCCACATCCCCACCATCAGCAGATGCAGCAACA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGAGTACAGGTCATGTCTaGAGATCTAGTCACAATACT +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLSTGHV*RSSHNT
Trigger: AGTATTGTGACTAGATCTTCAGACATGACCTGTACT...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAATGCTGGTCAGGACCTaGATTATCATTAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKMLVRT*IIIRYL
Trigger: CAAGTACCTAATGATAATTCAGGTCCTGACCAGCAT...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGAAGACTTGGGAATCACTaGTTTGGGAGTATGACTTAC +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRRLGNH*FGSMTY
Trigger: GTAAGTCATACTCCCAAATCAGTGATTCCCAAGTCT...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATCTATGCCTCTCCACTaGATTGTGTGTCTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRSMPLH*IVCLPV
Trigger: AACCGGGAGACACACAATGCAGTGGAGAGGCATAGA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGACCAGGATCATATTCTTaGTCTGCTTCAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRPGSYS*SASGQE
Trigger: CTCCTGCCCTGAAGCAGAGCAAGAATATGATCCTGG...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGACTGGTTGGTAGCCAATaGAGGAACTGTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRLVGSQ*RNCGLM
Trigger: CATCAGACCACAGTTCCTGCATTGGCTACCAACCAG...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCAGTTCTGGGAGGCTaGGAGCAGACTGTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYAVLGG*EQTVVV
Trigger: TACCACCACAGTCTGCTCGCAGCCTCCCAGAACTGC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAACTTGCTCAACTGGCTaGCCATCTGCTGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRTCSTG*PSAGKE
Trigger: TTCCTTTCCAGCAGATGGGCAGCCAGTTGAGCAAGT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACATTTGGTGTTGCTTCTaGCTGTCCTGTGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNIWCCF*LSCATL
Trigger: GAGAGTGGCACAGGACAGGCAGAAGCAACACCAAAT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGAAACCCCTGAACCTTaGTGTCTGCTTCCAACATCC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRETPEP*CLLPTS
Trigger: GGATGTTGGAAGCAGACAGCAAGGTTCAGGGGTTTC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTGAATTTTGGAACCACTaGTGTCTTGCAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVEFWNH*CLAGDA
Trigger: GGCATCCCCTGCAAGACAGCAGTGGTTCCAAAATTC...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAATCTTCTGCCAGAAGATaGTCTATGGGTTATGCTTTC +
Preference number: 4 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKSSARR*SMGYAF
Trigger: GAAAGCATAACCCATAGACCATCTTCTGGCAGAAGA...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCAGGGCAGGAGAACATaGGATCAGCTCTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVQGRRT*DQLSYS
Trigger: AGAATAGGAGAGCTGATCCCATGTTCTCCTGCCCTG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATCATCACTGTTGGGCATaGGGTGGTGCTAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYHHCWA*GGARWL
Trigger: CAGCCACCTAGCACCACCCCATGCCCAACAGTGATG...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTGCCCTCATCACTGTTaGGCATGGGGTGGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMCPHHC*AWGGAR
Trigger: CCTAGCACCACCCCATGCCCAACAGTGATGAGGGCA...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATGGAGCAGGGAGGAGTaGCAAAGGATTCTGATTAGC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRWSREE*QRILIS
Trigger: GCTAATCAGAATCCTTTGCCACTCCTCCCTGCTCCA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGGCAACATTGGTATTTaGATCTTCGCTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRGNIGI*IFAGGG
Trigger: CCCACCACCAGCGAAGATCCAAATACCAATGTTGCC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGATATTCAGGGCAACATTaGTATTTGGATCTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRYSGQH*YLDLRW
Trigger: CCAGCGAAGATCCAAATACCAATGTTGCCCTGAATA...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGAGTGTTTCCTGCCACCTaGCTTCTTATTCAACCTTTT +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRVFPAT*LLIQPF
Trigger: AAAAGGTTGAATAAGAAGCCAGGTGGCAGGAAACAC...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGTTCTCAAGGTTCTCCTaGTCAAAAATAGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLFSRFS*SKIALA
Trigger: AGCAAGAGCTATTTTTGACCAGGAGAACCTTGAGAA...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATGTGGCTGGCCAGTCTTaGATCGGGATTGGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNVAGQS*IGIGQF
Trigger: GAACTGACCAATCCCGATCCAAGACTGGCCAGCCAC...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGATCTAGTCACAATACTTaGTTGGGACACCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRSSHNT*LGHHLL
Trigger: CAGCAAATGGTGTCCCAACCAAGTATTGTGACTAGA...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAAGCATTAGCATTTATTaGTGGATTCATGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKSISIY*WIHATL
Trigger: GAGGGTGGCATGAATCCACCAATAAATGCTAATGCT...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGGTCATGTGCATTGGTaGCATATCTGGGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRGHVHW*HIWEKR
Trigger: CCTCTTCTCCCAGATATGCCACCAATGCACATGACC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGATGGGAATCACTGATTTaGGAGTATGACTTACCACCA +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRWESLI*EYDLPP
Trigger: TGGTGGTAAGTCATACTCCCAAATCAGTGATTCCCA...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGGAAGGCAGGAGTGTCTaGCCGTCTGGGCGAATCTCT +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLEGRSV*PSGRIS
Trigger: AGAGATTCGCCCAGACGGTCAGACACTCCTGCCTTC...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATTAAAAGTTATCCCCTaGACAGCTGTTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRLKVIP*TAVPWL
Trigger: CAGCCAGGGAACAGCTGTTCAGGGGATAACTTTTAA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCTGTGTGTTTCCAGCTaGAGAGATTCGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVLCVSS*RDSCKA
Trigger: AGCCTTACACGAATCTCTTCAGCTGGAAACACACAG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGATGATTACTATCTGTTaGCCTACTGTTTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLMITIC*PTVWLE
Trigger: TTCCAACCAAACAGTAGGTCAACAGATAGTAATCAT...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTCAGTATTGGCTCCATTaGTGGGGAGTCGAACAGAAC +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFQYWLH*WGVEQN
Trigger: GTTCTGTTCGACTCCCCATCAATGGAGCCAATACTG...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGATTTGCATAGGGGTTTaGTTTGTAGTTCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLICIGV*FVVPDE
Trigger: TTCATCAGGAACTACAAATCAAACCCCTATGCAAAT...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTGTGATATGCTTTGATTaGGGCTGGCCAAAGCACCAA +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVVICFD*GWPKHQ
Trigger: TTGGTGCTTTGGCCAGCCTCAATCAAAGCATATCAC...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGTGATATGCTTTGATTaGGGCTGGCCAAAGCACCAA +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRVICFD*GWPKHQ
Trigger: TTGGTGCTTTGGCCAGCCTCAATCAAAGCATATCAC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCTATTTGCAGCAGTTTaGGAATTGGCAGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVLFAAV*ELAGWL
Trigger: TAGCCAGCCTGCCAATTCTCAAACTGCTGCAAATAG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATCACACTTAAACTGGTaGTGCTTGGTGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRSHLNW*CLVAEK
Trigger: CTTCTCAGCCACCAAGCATCACCAGTTTAAGTGTGA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTGGCTCTTGAATCTGTaGATTTGGTATGGTACTAGT +
Preference number: 4 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDWLLNL*IWYGTS
Trigger: ACTAGTACCATACCAAATTCACAGATTCAAGAGCCA...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAATTTTCACTGTCCCTTaGTGGAATACCATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKIFTVP*WNTISC
Trigger: ACAGGAAATGGTATTCCATCAAGGGACAGTGAAAAT...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCTGCATGAAACTTTGGTaGCAAGTATTTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: AQFQVKCRNRVEATGGKICMKLW*QVFSLS
Trigger: GGACAGTGAAAATACTTGTCACCAAAGTTTCATGCA...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACCACTGTGTATTCCTCTaGTGTTCTGAGAGTGACCTC +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNHCVFL*CSESDL
Trigger: GAGGTCACTCTCAGAACATCAGAGGAATACACAGTG...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCGATTCCTTTCAGGCTaGCGAATTTTGGAACCACTG +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVRFLSG*RILEPL
Trigger: CAGTGGTTCCAAAATTCGTCAGCCTGAAAGGAATCG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGTGGGCTATCAGGCATaGAACGAACAATACTTCCTC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRVGYQA*NEQYFL
Trigger: GAGGAAGTATTGTTCGTTTCATGCCTGATAGCCCAC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACCAGTACATGACAAGATaGTCTCCCCCAATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNQYMTR*SPPISS
Trigger: GCTGGAAATTGGGGGAGATCATCTTGTCATGTACTG...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGGCAGGAGAATCACTTaGACCCGGGAGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSGRRIT*TREVEL
Trigger: AAGCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGAGGCAGAGGCTGCAGTaGGCCAAGATCCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLRQRLQ*AKILPL
Trigger: CAATGGCAGGATCTTGGCTCACTGCAGCCTCTGCCT...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATGAAAACTGTCCTTCTTaGAATTGGCACACTGGACCT +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYENCPS*NWHTGP
Trigger: AGGTCCAGTGTGCCAATTTCAAGAAGGACAGTTTTC...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTAGAGGAGTGGGTGAGTaGTATGTTCCAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFRGVGE*YVPTAG
Trigger: ACCAGCTGTTGGAACATATCACTCACCCACTCCTCT...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCAAATGTATCATCTTCTaGCAGAAGATGGTCTATGGG +
Preference number: 4 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIKCIIF*QKMVYG
Trigger: CCCATAGACCATCTTCTGGCAGAAGATGATACATTT...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTTCTATGCCTCTCCACTaGATTGTGTGTCTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFSMPLH*IVCLPV
Trigger: AACCGGGAGACACACAATGCAGTGGAGAGGCATAGA...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGCAGTTCTGGGAGGCTaGGAGCAGACTGTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSAVLGG*EQTVVV
Trigger: TACCACCACAGTCTGCTCGCAGCCTCCCAGAACTGC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGGAGAAGAATCACCTaGAGTTCTGGGAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNWRRIT*SSGRLR
Trigger: TCGCAGCCTCCCAGAACTGCAGGTGATTCTTCTCCA...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACATCTTTGGATTTTGCTaGGGCCATTGCAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDIFGFC*GHCKMF
Trigger: GAACATTTTGCAATGGCCGCAGCAAAATCCAAAGAT...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACGGTCAGATTAACCGTTaGAGGCACAGTTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNGQINR*RHSCLL
Trigger: GAGCAAACAACTGTGCCTGCAACGGTTAATCTGACC...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAATTCAGTTTGCCTCAATaGAGGAGTCACAAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKFSLPQ*RSHKVV
Trigger: AACAACTTTGTGACTCCTGCATTGAGGCAAACTGAA...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACCTTGCCTGGGTTTGCTaGTGTTCAGCAACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNLAWVC*CSATEG
Trigger: GCCTTCAGTTGCTGAACAGCAGCAAACCCAGGCAAG...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTGCCTCTCTCTTAACTaGCCTGCTTGTTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNCLSLN*PACCCC
Trigger: GCAACAACAACAAGCAGGGCAGTTAAGAGAGAGGCA...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTGTGGACAGAGCTCTCTaGATGAGGTACATGATGCTG +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFVDRAL*MRYMML
Trigger: CAGCATCATGTACCTCATGCAGAGAGCTCTGTCCAC...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATTCCCAGCTGGCCCTTTaGTATAACAGAGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNSQLAL*YNRGVG
Trigger: ACCCACTCCTCTGTTATAGCAAAGGGCCAGCTGGGA...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCCTAATGACAGGATTATaGAGTCATCCAAAATTCCCC +
Preference number: 4 (lower is better)
Translates to: AQFQVKCRNRVEATGGKILMTGL*SHPKFP
Trigger: GGGGAATTTTGGATGACTGCATAATCCTGTCATTAG...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATGAGTGTCTGACCGTCTaGGCGAATCTCTCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHECLTV*ANLSVR
Trigger: GCGGACGGAGAGATTCGCCCAGACGGTCAGACACTC...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCAAGTCCTCTGTACTaGCACCACATTGGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYASPLY*HHIGGL
Trigger: CAGACCGCCAATGTGGTGCCAGTACAGAGGACTTGC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATAATCACCTGCAGTTCTaGGAGGCTGCGAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYNHLQF*EAASRL
Trigger: CAGTCTGCTCGCAGCCTCCCAGAACTGCAGGTGATT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCAGAGCTGGTTGACATaGGAGAGTCGGCCTGTCTAC +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMQSWLT*ESRPVY
Trigger: GTAGACAGGCCGACTCTCCCATGTCAACCAGCTCTG...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACTACTGCCAGAGCTaGTTGACATGGGAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYDYCQS*LTWESR
Trigger: CCGACTCTCCCATGTCAACCAGCTCTGGCAGTAGTC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGTCAGAAATGGTGTCTaGAGTTCTGCTCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRVRNGV*SSAHQG
Trigger: TCCCTGATGAGCAGAACTCCAGACACCATTTCTGAC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTGGATGTGGCAACGCTaGCCTTGCAACCCCATGCAT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMWMWQR*PCNPMH
Trigger: ATGCATGGGGTTGCAAGGCCAGCGTTGCCACATCCA...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACCAGGCTGACGAATTTTaGAACCACTGCTGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNQADEF*NHCCLA
Trigger: TGCAAGACAGCAGTGGTTCCAAAATTCGTCAGCCTG...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATGAGAAGAGGAAAACTTaGTTGAGCAAACCCAACAGG +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYEKRKT*LSKPNR
Trigger: CCTGTTGGGTTTGCTCAACCAAGTTTTCCTCTTCTC...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGAGTTTACAACCCAAGTTaGCTCACGTTTATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRVYNPS*LTFMKH
Trigger: ATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAAC...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
3UTR CAA 72 bp CCCAGTACCTCAGTGACTTCACAGATGAAAAATGATTaGAAGACTTCAGGGGTGGGAGCACAGAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: PSTSVTSQMKND*KTSGVGAQRSL
Trigger: AAGACTTCTCTGTGCTCCCACCCCTGAAGTCTTCAAATCATTTTTCATCTGTGAAGTCACTGAGGTACTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCAGCTCGAGAATACTCTaGGCAGAAATGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVSSRIL*AEMAAG
Trigger: TCCTGCTGCCATTTCTGCTCAGAGTATTCTCGAGCT...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAATTTAAAGAAATGGTTTaGGGCTGTTGGTTTGACATG +
Preference number: 4 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKFKEMV*GCWFDM
Trigger: CATGTCAAACCAACAGCCTCAAACCATTTCTTTAAA...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACATCTGTGATATGCTTTaGTTGAGGCTGGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNICDML*LRLAKA
Trigger: TGCTTTGGCCAGCCTCAATCAAAGCATATCACAGAT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTGGACATTATGGGGCTaGGAGTGGACAGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYWTLWG*EWTELS
Trigger: AGAGAGCTCTGTCCACTCTCAGCCCCATAATGTCCA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTGGACATTATGGGGCTaGGAGTGGACAGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMWTLWG*EWTELS
Trigger: AGAGAGCTCTGTCCACTCTCAGCCCCATAATGTCCA...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCTCTTTTTCTGCATCTaGACTTCCTGTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVLFFCI*TSCCRV
Trigger: GACTCTGCAACAGGAAGTTCAGATGCAGAAAAAGAG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCCCCATTCTCTGCTCTaGATTAGAAGATGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVPHSLL*IRRCLS
Trigger: GGAAAGACATCTTCTAATTCAGAGCAGAGAATGGGG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATCATTTCAAGCTGATCTaGAACTCTGGAACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYHFKLI*NSGTLN
Trigger: ATTCAGGGTTCCAGAGTTTCAGATCAGCTTGAAATG...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATAGAAAGGCGGATATCTaGGGCCACAGTATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYRKADI*GHSMVH
Trigger: GTGGACCATACTGTGGCCTCAGATATCCGCCTTTCT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGACTTGTGTTTCGACCTTaGATATCTCCTGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRLVFRP*ISPEEE
Trigger: CTCTTCCTCAGGAGATATTCAAGGTCGAAACACAAG...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATCATGCATGTTGGTTGTaGCTGGAGGGTTCATGTGGC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYHACWL*LEGSCG
Trigger: GCCACATGAACCCTCCAGTCACAACCAACATGCATG...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTTCTGTGGCAGGTTGTTaGCGTCCAAGAATCATACTG +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTSVAGC*RPRIIL
Trigger: CAGTATGATTCTTGGACGTCAACAACCTGCCACAGA...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGAAGGAAAATAGGGGATTaGAATATCATTGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRRKIGD*NIIGQC
Trigger: ACACTGTCCAATGATATTTCAATCCCCTATTTTCCT...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATGCTGAACTGCAATCATaGCCTAGAATATGGCTTATG +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYAELQS*PRIWLM
Trigger: CATAAGCCATATTCTAGGTCATGATTGCAGTTCAGC...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCTGCTTTTACCCTTATaGCCCGATGCAAAATGCAAG +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVLLLPL*PDAKCK
Trigger: CTTGCATTTTGCATCGGGTCATAAGGGTAAAAGCAG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAAGACTTGGGAATCACTaGTTTGGGAGTATGACTCAC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRRLGNH*FGSMTH
Trigger: GTGAGTCATACTCCCAAATCAGTGATTCCCAAGTCT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACCTGGTTGGTAGCCAATaGAGGAACTGTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNLVGSQ*RNCGLM
Trigger: CATCAGACCACAGTTCCTGCATTGGCTACCAACCAG...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGACTGCTAAGTGTTTCCTaGCACCTGGCTTCTTATTCA +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRLLSVS*HLASYS
Trigger: TGAATAAGAAGCCAGGTGGCAGGAAACACTTAGCAG...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATCTTGCCTGGGTTTGCTaGTGTTCAGCAACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYLAWVC*CSATEG
Trigger: GCCTTCAGTTGCTGAACAGCAGCAAACCCAGGCAAG...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCTGAGAGGTCTGGGTaGCCTGAACAAGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYAERSG*PEQDSS
Trigger: AGAGGAATCTTGTTCAGGGCACCCAGACCTCTCAGC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGAGCTTCCAAAGTGTTaGTGCATTTGTTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRELPKC*CICCCI
Trigger: GATGCAGCAACAAATGCAGCAACACTTTGGAAGCTC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGCCTTGCAACCCCATaGATGTTGGTTGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYGLATP*MLVVTG
Trigger: TCCAGTCACAACCAACATGCATGGGGTTGCAAGGCC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCTGTCTTGCAGGGGATaGCTTGATCTCTGGGGAACT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMLSCRG*LDLWGT
Trigger: AGTTCCCCAGAGATCAAGGCATCCCCTGCAAGACAG...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTCAGTTTCAGGTAAAGTaGAGGAACAGGGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTQFQVK*RNRVEA
Trigger: AGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTG...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTGTGTGCAGCAGACACTaGTGCCATGGTAATAGATAC +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFVCSRH*CHGNRY
Trigger: GTATCTATTACCATGGCAGCAGTGTCTGCTGCACAC...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGAATTCTCTGTCATTTCTaGCATGGTTACAGTAATAGG +
Preference number: 4 (lower is better)
Translates to: RCLITQRVPSQLALCYNRILCHF*HGYSNR
Trigger: CCTATTACTGTAACCATGCCAGAAATGACAGAGAAT...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCCAGGGCAGGAGAACATaGGATCAGCTCTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: VEANLFFTVTQLQHLNTIQGRRT*DQLSYS
Trigger: AGAATAGGAGAGCTGATCCCATGTTCTCCTGCCCTG...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTAATCACCTGCAGTTCTaGGAGGCTGCGAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSNHLQF*EAASRL
Trigger: CAGTCTGCTCGCAGCCTCCCAGAACTGCAGGTGATT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCTGGAGCAGGGAGGAGTaGCAAAGGATTCTGATTAGC +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVWSREE*QRILIS
Trigger: GCTAATCAGAATCCTTTGCCACTCCTCCCTGCTCCA...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCCTGAGCCTTCAGTGTTaGGGCAGTCTAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: VEANLFFTVTQLQHLNTILSLQC*GSLTCS
Trigger: TGAGCAAGTTAGACTGCCCCAACACTGAAGGCTCAG...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACAGAATTAAATTCATTTaGTGTTGCTTCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDRIKFI*CCFCLS
Trigger: GGACAGGCAGAAGCAACACCAAATGAATTTAATTCT...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATTGGTGGGGATGTGGCTaGCCAGTCTTGGATCGGGAT +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHWWGCG*PVLDRD
Trigger: ATCCCGATCCAAGACTGGCCAGCCACATCCCCACCA...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCTGATGGTGGGGATGTaGCTGGCCAGTCTTGGATCG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLMVGM*LASLGS
Trigger: CGATCCAAGACTGGCCAGCCACATCCCCACCATCAG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTGGATGCCTTGATCTCTaGGGAACTGAAGAATTAGCT +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVGCLDL*GTEELA
Trigger: AGCTAATTCTTCAGTTCCCCAGAGATCAAGGCATCC...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTCCCAAAGCCAAGACTTaGGAATCACTGATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFPKAKT*ESLIWE
Trigger: CTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGG...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATGTGTACCATCCCAGCTaGCCCTTTGCTATAACAGAG +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNVYHPS*PFAITE
Trigger: CTCTGTTATAGCAAAGGGCCAGCTGGGATGGTACAC...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGCAGGAACTGTGGTCTaGTGCCATGGCTTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMAGTVV*CHGLFS
Trigger: TGAAAACAAGCCATGGCATCAGACCACAGTTCCTGC...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGGCACCAAGCACATTTaGTTCGCTTTCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSGTKHI*FAFRGG
Trigger: CCCACCTCTGAAAGCGAATCAAATGTGCTTGGTGCC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTACTCCAGGGGCAGATaGTGCCACCACTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHYSRGR*CHHCSC
Trigger: ACAGCTACAGTGGTGGCATCATCTGCCCCTGGAGTA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTCTGGCTTAAGGGCTaGATAGTGTTTCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYVWLKG*IVFPAS
Trigger: ACTGGCAGGAAACACTATTCAGCCCTTAAGCCAGAC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATACTTGCTCACATCTCTaGCTGAATTCAGGGGACACG +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYTCSHL*LNSGDT
Trigger: CGTGTCCCCTGAATTCAGTCAGAGATGTGAGCAAGT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAAACACCCAAAGAATGTaGAGCAGAAACACTCACACT +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRNTQRM*SRNTHT
Trigger: AGTGTGAGTGTTTCTGCTTCACATTCTTTGGGTGTT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTGCTGGACTTTTCTGCTaGCTTAGATTTCGATACAGA +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVAGLFC*LRFRYR
Trigger: TCTGTATCGAAATCTAAGTCAGCAGAAAAGTCCAGC...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGAATCAATACATTGGCTaGAGCGCAGGGTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLNQYIG*SAGFGS
Trigger: GCTGCCAAACCCTGCGCTTCAGCCAATGTATTGATT...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAATCAATACATTGGCTaGAGCGCAGGGTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMNQYIG*SAGFGS
Trigger: GCTGCCAAACCCTGCGCTTCAGCCAATGTATTGATT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATGCAAGGTTCAGCAATaGTTTCTACCTCAGAAACAC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRCKVQQ*FLPQKH
Trigger: GTGTTTCTGAGGTAGAAATCATTGCTGAACCTTGCA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATGTAAGGCCATCTCCATaGGCTGGGTTGCTAACAGGC +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHVRPSP*AGLLTG
Trigger: GCCTGTTAGCAACCCAGCTCATGGAGATGGCCTTAC...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTGGTGCATAATATCTTaGTTGAGATGGTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVWCIIS*LRWFWG
Trigger: TCCCCAGAACCATCTCAATCAAGATATTATGCACCA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCTTGGTTTAAACGTCTaGCAATCAGAAAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVLGLNV*QSERRI
Trigger: TATCCGCCTTTCTGATTGTCAGACGTTTAAACCAAG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATCAAGTAAGCTCTGCATaGAACTTTGGTGACAAGTAT +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYQVSSA*NFGDKY
Trigger: ATACTTGTCACCAAAGTTTCATGCAGAGCTTACTTG...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTATGCTGGTCAGGACCTaGATTATCATTAGGTACTTG +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVMLVRT*IIIRYL
Trigger: CAAGTACCTAATGATAATTCAGGTCCTGACCAGCAT...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGATGGGCAGGTCTGTTTaGGGACTGCTTGGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLMGRSV*GLLGRV
Trigger: GACTCTTCCAAGCAGTCCTCAAACAGACCTGCCCAT...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGCTGAACTGCAATCATaGCCTAGAATATGGCTTATG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRAELQS*PRIWLM
Trigger: CATAAGCCATATTCTAGGTCATGATTGCAGTTCAGC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTACGAAGCAAGACCATTaGGGAATTCCTACACCTTAC +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTTKQDH*GIPTPY
Trigger: GTAAGGTGTAGGAATTCCTCAATGGTCTTGCTTCGT...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGAATGACTGGCTTCCCTaGGCCCTATTTGACATGGAG +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLNDWLP*ALFDME
Trigger: CTCCATGTCAAATAGGGCTCAGGGAAGCCAGTCATT...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCTGTCGAGAAGGTGTCTaGTTACACAGCGTGTACCAT +
Preference number: 4 (lower is better)
Translates to: VEANLFFTVTQLQHLNTICREGV*LHSVYH
Trigger: ATGGTACACGCTGTGTAATCAGACACCTTCTCGACA...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACATGGTAAGGCAACAGTaGGAAACATCAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNMVRQQ*ETSAVL
Trigger: AAGTACAGCTGATGTTTCTCACTGTTGCCTTACCAT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCATGGTCTATGGGTTATaGTTTCTTCTTACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: VEANLFFTVTQLQHLNTIMVYGL*FLLTAG
Trigger: GCCGGCGGTAAGAAGAAAGCATAACCCATAGACCAT...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTCTATGCCTCTCCACTaGATTGTGTGTCTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMSMPLH*IVCLPV
Trigger: AACCGGGAGACACACAATGCAGTGGAGAGGCATAGA...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCTGAATAGTGTTTCCTaGCAGTTGCAAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVLNSVS*QLQSSP
Trigger: TGGACTACTTTGCAACTGGCAGGAAACACTATTCAG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGACTGAATAGTGTTTCCTaGCAGTTGCAAAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRLNSVS*QLQSSP
Trigger: TGGACTACTTTGCAACTGGCAGGAAACACTATTCAG...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTGGGCAATTAGTGGCTaGATAGGTAAAGATGGACAA +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNWAISG*IGKDGQ
Trigger: TTGTCCATCTTTACCTATGCAGCCACTAATTGCCCA...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAAATTGTACACAGCTTTaGCCAGCCATCTGTGATATG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRNCTQL*PAICDM
Trigger: CATATCACAGATGGCTGGGCAAAGCTGTGTACAATT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACAACACTCACACTATTTaGCTGAGACACAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNNTHTI*LRHRDR
Trigger: TCTGTCTCTGTGTCTCAGGCAAATAGTGTGAGTGTT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGTGGACAGAGCTCTCTaGATGAGGTACATGATGCTG +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMVDRAL*MRYMML
Trigger: CAGCATCATGTACCTCATGCAGAGAGCTCTGTCCAC...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTCTTCCAAAGTGTTGCTaGATTTGTTGCTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTLPKCC*ICCCIC
Trigger: GCAGATGCAGCAACAAATGCAGCAACACTTTGGAAG...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGGCCTTGCAACCCCATaGATGTTGGTTGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSGLATP*MLVVTG
Trigger: TCCAGTCACAACCAACATGCATGGGGTTGCAAGGCC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGAGGGCAGAGTATTTTaGGGATCTACCGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSEGRVF*GSTGMR
Trigger: CCTCATCCCGGTAGATCCGCAAAATACTCTGCCCTC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACACCCTTATGACCCGATaGAAAATGCAAGCACAAAAC +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNTLMTR*KMQAQN
Trigger: GTTTTGTGCTTGCATTTTGCATCGGGTCATAAGGGT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCCAATGCAGGAACTGTaGTCTGATGCCATGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMPMQEL*SDAMAC
Trigger: ACAAGCCATGGCATCAGACCACAGTTCCTGCATTGG...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCCACATATCTACTGTaGTTGCTTGTGGTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYATYLL*LLVVGL
Trigger: TAGCCCCACCACAAGCAACCACAGTAGATATGTGGC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATGGGGTGGTGCTAGGTaGCTGAAGAATTATAACATT +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRWGGAR*LKNYNI
Trigger: AATGTTATAATTCTTCAGCCACCTAGCACCACCCCA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTCCTCCAAAAGTCTGTaGTGTTGGAACATTTTGCAC +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVSSKSL*CWNILH
Trigger: GTGCAAAATGTTCCAACACCACAGACTTTTGGAGGA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGGTCTTGGTAATATGTaGACAAGATGCTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRGLGNM*TRCFPP
Trigger: TGGAGGAAAGCATCTTGTCCACATATTACCAAGACC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTATTCAGGGCAACATTaGTATTTGGATCTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVYSGQH*YLDLRW
Trigger: CCAGCGAAGATCCAAATACCAATGTTGCCCTGAATA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTGTGTTTCCTGCCACCTaGCTTCTTATTCAACCTTTT +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVVFPAT*LLIQPF
Trigger: AAAAGGTTGAATAAGAAGCCAGGTGGCAGGAAACAC...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATCTGAGCCTTCAGTGTTaGGGCAGTCTAACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYLSLQC*GSLTCS
Trigger: TGAGCAAGTTAGACTGCCCCAACACTGAAGGCTCAG...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACCTGAAGCGCAGGGTTTaGCAGCATCTGATAATGCTA +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNLKRRV*QHLIML
Trigger: TAGCATTATCAGATGCTGCCAAACCCTGCGCTTCAG...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACGTAATAGTTCCTGTTTaGGATGTAAATTCACACTTG +
Preference number: 4 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDVIVPV*DVNSHL
Trigger: CAAGTGTGAATTTACATCCCAAACAGGAACTATTAC...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACGCAGGAATGATGCTGTaGAGGATCTCTATCATCATT +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNAGMML*RISIII
Trigger: AATGATGATAGAGATCCTCCACAGCATCATTCCTGC...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGGACTACTGCCAGAGCTaGTTGACATGGGAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIEDYCQS*LTWESR
Trigger: CCGACTCTCCCATGTCAACCAGCTCTGGCAGTAGTC...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTAGATACACCTTGAGCTaGAACATGCTGCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSRYTLS*NMLLQG
Trigger: GCCCTGCAGCAGCATGTTCCAGCTCAAGGTGTATCT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTGATTGGTCAGTTCCATaGTGCTTTGGTTGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVDWSVP*CFGCKE
Trigger: TTCCTTACAACCAAAGCACCATGGAACTGACCAATC...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATCAGCTCTTCTCTGTCTaGGAGCTTCCAAAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYQLFSV*ELPKCC
Trigger: GCAACACTTTGGAAGCTCCCAGACAGAGAAGAGCTG...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACCAAAAGCCTCTGCATTaGATTATGGCCAGATACATG +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNQKPLH*IMARYM
Trigger: CATGTATCTGGCCATAATCCAATGCAGAGGCTTTTG...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTCTAGTCACAATACTTaGTTGGGACACCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNSSHNT*LGHHLL
Trigger: CAGCAAATGGTGTCCCAACCAAGTATTGTGACTAGA...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTAACTCTATTTCTCTCTaGCCTGTGTGGAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFNSISL*PVWSTG
Trigger: ACCTGTACTCCACACAGGCCAGAGAGAAATAGAGTT...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGCTGATCTGAAACTCTaGAACCCTGAATTGATATCC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRADLKL*NPELIS
Trigger: GGATATCAATTCAGGGTTCCAGAGTTTCAGATCAGC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGTCTGAGGCCACAGTATaGTCCACACGACCCTGCATA +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLSEATV*STRPCI
Trigger: TATGCAGGGTCGTGTGGACCATACTGTGGCCTCAGA...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATTTGACTAGCTCCACTTaGTTTAAACGTCTGACAATC +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYLTSST*FKRLTI
Trigger: GATTGTCAGACGTTTAAACCAAGTGGAGCTAGTCAA...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTCTAATTCGAAAAGCCTaGGACTGCATACTCCGCAAT +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTLIRKA*DCILRN
Trigger: ATTGCGGAGTATGCAGTCCCAGGCTTTTCGAATTAG...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTTGACGGTCAATTGGTaGGGGGCCAGTGTTTTGACT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMLTVNW*GASVLT
Trigger: AGTCAAAACACTGGCCCCCCACCAATTGACCGTCAA...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATTCAATTGCAGAGGATaGACCACACTGTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRFNCRG*TTLCIP
Trigger: AGGAATACACAGTGTGGTCCATCCTCTGCAATTGAA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCATGTTGGTTGTGACTaGAGGGTTCATGTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMHVGCD*RVHVAL
Trigger: AAGGGCCACATGAACCCTCCAGTCACAACCAACATG...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATCAGGCTGACGAATTTTaGAACCACTGCTGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNQADEF*NHCCLA
Trigger: TGCAAGACAGCAGTGGTTCCAAAATTCGTCAGCCTG...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAAGGCTGAGTAACCTGTaGAATGAAAGAAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRRLSNL*NERSIS
Trigger: GCTAATGCTTCTTTCATTCCACAGGTTACTCAGCCT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGACAAACCCAACAGGTCTaGGAGGAGATAAAATTGATC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRQTQQV*EEIKLI
Trigger: GATCAATTTTATCTCCTCCCAGACCTGTTGGGTTTG...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTTTGACATGGAGCAGATaGAAGAGCATAAGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFLTWSR*KSISAY
Trigger: GTAGGCACTTATGCTCTTCCATCTGCTCCATGTCAA...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATATTACTGTTGCCCTCTaGATGTACACAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYITVAL*MYTATG
Trigger: GCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAAT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTATATGTTCCAACAGCTaGTCTAAAGACCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFICSNS*SKDQRH
Trigger: GTGCCTCTGGTCTTTAGACCAGCTGTTGGAACATAT...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATGAGTTTCTTCACTTTTaGTTCCTGGCTTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNEFLHF*FLASNA
Trigger: GGCATTGGAAGCCAGGAATCAAAAGTGAAGAAACTC...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACGAGTTTCTTCACTTTTaGTTCCTGGCTTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNEFLHF*FLASNA
Trigger: GGCATTGGAAGCCAGGAATCAAAAGTGAAGAAACTC...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTAGATTTCCTTTCCAGTaGATTGTCGGGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVRFPFQ*IVGSSY
Trigger: ATATGATGACCCGACAATTCACTGGAAAGGAAATCT...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACGACTGTGGTGGTAACTaGAACAACAAAAGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNDCGGN*NNKSVL
Trigger: CAAAACACTTTTGTTGTTTCAGTTACCACCACAGTC...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGTCTGGCTTAAGGGCTaGATAGTGTTTCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSVWLKG*IVFPAS
Trigger: ACTGGCAGGAAACACTATTCAGCCCTTAAGCCAGAC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTAGTGGCAAAGGATTCTaGTTAGCAGCCTGTATGATT +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTSGKGF*LAACMI
Trigger: AATCATACAGGCTGCTAATCAGAATCCTTTGCCACT...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTTGCCCAGCCATCTGTaGTATGCTTTGATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYLPSHL*YALIEA
Trigger: AGCCTCAATCAAAGCATATCACAGATGGCTGGGCAA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGACTTGCTCACATCTCTaGCTGAATTCAGGGGACACG +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLTCSHL*LNSGDT
Trigger: CGTGTCCCCTGAATTCAGTCAGAGATGTGAGCAAGT...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAAGCATGGATGCAACTaGGAAACTACGACTACTGCC +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMKHGCN*ETTTTA
Trigger: GGCAGTAGTCGTAGTTTCTCAGTTGCATCCATGCTT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATGTGATGCTTGGTGGCTaGGAAGTTGAATCCTGTAAA +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNVMLGG*EVESCK
Trigger: TTTACAGGATTCAACTTCTCAGCCACCAAGCATCAC...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTCACACTTAAACTGGTaGTGCTTGGTGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYSHLNW*CLVAEK
Trigger: CTTCTCAGCCACCAAGCATCACCAGTTTAAGTGTGA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGCCATAGGAGCTAGATaGAACGGTCAGATTAACCGT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMAIGAR*NGQINR
Trigger: ACGGTTAATCTGACCGTTTCATCTAGCTCCTATGGC...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATGGCTCTTGAATCTGTaGATTTGGTATGGTACTAGT +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRWLLNL*IWYGTS
Trigger: ACTAGTACCATACCAAATTCACAGATTCAAGAGCCA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCCTCTTTTTCTGCATCTaGACTTCCTGTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VEANLFFTVTQLQHLNTILFFCI*TSCCRV
Trigger: GACTCTGCAACAGGAAGTTCAGATGCAGAAAAAGAG...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATAGAAAGGCGGATATCTaGGGCCACAGTATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHRKADI*GHSMVH
Trigger: GTGGACCATACTGTGGCCTCAGATATCCGCCTTTCT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGTTACTCTGGGGCTGTTaGCTAGCTCCACTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLLLWGC*LAPLGL
Trigger: TAAACCAAGTGGAGCTAGTCAACAGCCCCAGAGTAA...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACCAAGTAAGCTCTGCATaGAACTTTGGTGACAAGTAT +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNQVSSA*NFGDKY
Trigger: ATACTTGTCACCAAAGTTTCATGCAGAGCTTACTTG...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTGGCCCTTGGTGGCATaGCTCTCAGTAATCCTCATG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHWPLVA*LSVILM
Trigger: CATGAGGATTACTGAGAGTCATGCCACCAAGGGCCA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCGAGTGGCACTAGGCTaGGTAACCTGTGGAATGAAA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSRVALG*VTCGMK
Trigger: TTTCATTCCACAGGTTACTCAGCCTAGTGCCACTCG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGTTGGACAGTGTAGGATaGGCAGGAGAGTATGGAGGA +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLLDSVG*AGEYGG
Trigger: TCCTCCATACTCTCCTGCTCATCCTACACTGTCCAA...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTTGGACAGTGTAGGATaGGCAGGAGAGTATGGAGGA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSLDSVG*AGEYGG
Trigger: TCCTCCATACTCTCCTGCTCATCCTACACTGTCCAA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGACTCTGTGCTAGGATTTaGGAACATCTGATTAGGAAA +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRLCARI*EHLIRK
Trigger: TTTCCTAATCAGATGTTCTCAAATCCTAGCACAGAG...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAAGAAAAGCTGGTCCTTaGGTTCACTTTGTTAACAAG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRRKAGP*VHFVNK
Trigger: CTTGTTAACAAAGTGAACTCAAGGACCAGCTTTTCT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAGACTCCAGCCTGGGTaGCAAAGTGACCTTGAATAT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMRLQPG*QSDLEY
Trigger: ATATTCAAGGTCACTTTGTCACCCAGGCTGGAGTCT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTAAAGACCAGCTTCCCTaGGCCCTATTTCACATGGAG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSKDQLP*ALFHME
Trigger: CTCCATGTGAAATAGGGCTCAGGGAAGCTGGTCTTT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATTTCACAGATGAAAAATaGTTTGAAGACTTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYFTDEK*FEDFRG
Trigger: ACCCCTGAAGTCTTCAAATCATTTTTCATCTGTGAA...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGATGGTCTATGGGTTATaGTTTCTTCTTACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMMVYGL*FLLTAG
Trigger: GCCGGCGGTAAGAAGAAAGCATAACCCATAGACCAT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTAGGAACCTAAGGGCTTaGAGAGTTTCTTCACTTTTG +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTRNLRA*RVSSLL
Trigger: CAAAAGTGAAGAAACTCTGCAAGCCCTTAGGTTCCT...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCCAGGATCATATTCTTaGTCTGCTTCAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSPGSYS*SASGQE
Trigger: CTCCTGCCCTGAAGCAGAGCAAGAATATGATCCTGG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCAGGAGTCACAAGATTaGAAGTCCTCTGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMQESQD*KSSVLA
Trigger: TGCCAGTACAGAGGACTTGCAATCTTGTGACTCCTG...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATGACTTGTTTCCATGGTaGACTTTAGTGGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNDLFPW*TLVAVA
Trigger: AGCAACTGCCACTAAAGTGCACCATGGAAACAAGTC...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGTGTTTCCTGCCAGTTaGAAAGTAGTCCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMVFPAS*KVVHVV
Trigger: GACAACGTGGACTACTTTGCAACTGGCAGGAAACAC...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGTATCTGATGAATCTTaGTCAACTCTGCAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRVSDES*STLQGS
Trigger: TGAACCTTGCAGAGTTGAGCAAGATTCATCAGATAC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTAATGTAGTTAAACCTTaGCCCTTTAAGAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVNVVKP*PFKRPV
Trigger: CACAGGTCTCTTAAAGGGGCAAGGTTTAACTACATT...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTGGGACACCATTTGCTaGTCTAAGCCTCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYWDTIC*SKPLDV
Trigger: GACATCAAGAGGCTTAGAGCAGCAAATGGTGTCCCA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACGATATCCCCATTCTCTaGTCTGAATTAGAAGATGTC +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNDIPIL*SELEDV
Trigger: GACATCTTCTAATTCAGAGCAGAGAATGGGGATATC...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCTGTCTTGCAGGGGATaGCTTGATCTCTGGGGAACT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLSCRG*LDLWGT
Trigger: AGTTCCCCAGAGATCAAGGCATCCCCTGCAAGACAG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACACATGTCTGTGCACATaGACGCACAAATACATTTGT +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNTCLCT*THKYIC
Trigger: ACAAATGTATTTGTGCGTGCATGTGCACAGACATGT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTACATCCATTGTTAACTaGACCCATGCAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFTSIVN*THAKLH
Trigger: GTGGAGTTTTGCATGGGTGCAGTTAACAATGGATGT...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTTCACTGGAGTTAACTaGTCTGACCAACCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNFTGVN*SDQPLG
Trigger: TCCTAAGGGTTGGTCAGAGCAGTTAACTCCAGTGAA...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTTGGCTATTACTGTTaGCCTCTGGATGTACACAGC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYVGYYC*PLDVHS
Trigger: GCTGTGTACATCCAGAGGGCAACAGTAATAGCCAAC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCTCCCAGCTGGCCCTTTaGTATAACAGAGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCSQLAL*YNRGVG
Trigger: ACCCACTCCTCTGTTATAGCAAAGGGCCAGCTGGGA...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTCTGACCACATACGCGTaGCAGAAAAAGATTACAGTT +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTLTTYA*QKKITV
Trigger: AACTGTAATCTTTTTCTGGCACGCGTATGTGGTCAG...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCCAGAAGATGGTCTATaGGTTATGCTTTCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVPEDGL*VMLSSY
Trigger: GTAAGAAGAAAGCATAACCCATAGACCATCTTCTGG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTGGTCTGATGCCATaGCTTGTTTTCAGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNCGLMP*LVFRRV
Trigger: TACCCTTCTGAAAACAAGCCATGGCATCAGACCACA...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCAAAGAGGAACAGGCTaGTTGGTAGCCAATGCAGGA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSQRGTG*LVANAG
Trigger: TCCTGCATTGGCTACCAACCAGCCTGTTCCTCTTTG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTTGCTGAGGAGCTGTaGGGGATGTTTGTAACACAA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYVAEEL*GMFVTQ
Trigger: TTGTGTTACAAACATCCCCCACAGCTCCTCAGCAAC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATAACTACTTGCTCAACTaGCTGCCCATCTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYNYLLN*LPICWK
Trigger: TTTCCAGCAGATGGGCAGCCAGTTGAGCAAGTAGTT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTTCCTCCAAAAGTCTGTaGTGTTGGAACATTTTGCAC +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFSSKSL*CWNILH
Trigger: GTGCAAAATGTTCCAACACCACAGACTTTTGGAGGA...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATCTGAAGCGCAGGGTTTaGCAGCATCTGATAATGCTA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYLKRRV*QHLIML
Trigger: TAGCATTATCAGATGCTGCCAAACCCTGCGCTTCAG...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTTCTCAAGGTTCTCCTaGTCAAAAATAGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVFSRFS*SKIALA
Trigger: AGCAAGAGCTATTTTTGACCAGGAGAACCTTGAGAA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTCCCTTATATCAGCCTaGAGGCCAACTCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHSLISA*RPTLPF
Trigger: GAAGGGGAGAGTTGGCCTCCAGGCTGATATAAGGGA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTCCTTACGGCTTTCATaGCTTGGCTTTAAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYSLRLS*LGFKSG
Trigger: GCCACTCTTAAAGCCAAGCCATGAAAGCCGTAAGGA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATAGATACACCTTGAGCTaGAACATGCTGCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHRYTLS*NMLLQG
Trigger: GCCCTGCAGCAGCATGTTCCAGCTCAAGGTGTATCT...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACCTCTGCATTGGATTATaGCCAGATACATGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNLCIGL*PDTCSD
Trigger: ATCTGAACATGTATCTGGCCATAATCCAATGCAGAG...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATAGACACAGATGGATGTaGCAACGCTGGCCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHRHRWM*QRWPCN
Trigger: GTTGCAAGGCCAGCGTTGCCACATCCATCTGTGTCT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAAAGATGGGGAAGACTTaGATCAAAGACAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRKMGKT*IKDSTL
Trigger: CAAAGTACTGTCTTTGATCCAAGTCTTCCCCATCTT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCTGGATAAGTGAGAGTTaGTCATGTGCATTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVWISES*SCALVA
Trigger: TGCCACCAATGCACATGACCAACTCTCACTTATCCA...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATAGGAAGCTGCTTAGTTaGCAGCAGAAAAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYRKLLS*QQKRDR
Trigger: CCTGTCTCTTTTCTGCTGCCAACTAAGCAGCTTCCT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTGAATACAAGGCATACTaGTTCCCAAAGCCAAGACTT +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFEYKAY*FPKPRL
Trigger: AAGTCTTGGCTTTGGGAACCAGTATGCCTTGTATTC...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGGGTAGAGGCTACAGGTaGAAAGATCTAGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLGRGYR*KDLEAL
Trigger: CAGAGCTTCTAGATCTTTCCACCTGTAGCCTCTACC...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGTTAAAAGTTATCCCCTaGACAGCTGTTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLLKVIP*TAVPWL
Trigger: CAGCCAGGGAACAGCTGTTCAGGGGATAACTTTTAA...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATAGCTCGAGAATACTCTaGGCAGAAATGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHSSRIL*AEMAAG
Trigger: TCCTGCTGCCATTTCTGCTCAGAGTATTCTCGAGCT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTTTGAAAATCACCTCTaGAGTCCTGTATGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMFENHL*SPVCSG
Trigger: GCCTGAGCATACAGGACTTCAGAGGTGATTTTCAAA...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCTGTGTGTTTCCAGCTaGAGAGATTCGTGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSLCVSS*RDSCKA
Trigger: AGCCTTACACGAATCTCTTCAGCTGGAAACACACAG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACAATCACTTGCATTGCTaGATTCAGTGGAAGGATATT +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNNHLHC*IQWKDI
Trigger: AATATCCTTCCACTGAATTCAGCAATGCAAGTGATT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACATTTGCATAGGGGTTTaGTTTGTAGTTCCTGATGAA +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNICIGV*FVVPDE
Trigger: TTCATCAGGAACTACAAATCAAACCCCTATGCAAAT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTCGCTGGTGGTGGGTTaGATAATTTGCATAGGGGTT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSSLVVG*IICIGV
Trigger: AACCCCTATGCAAATTATTCAACCCACCACCAGCGA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATAGTGCTTGTTGTAGATaGCAAACCAGGAACCTGAGA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYSACCR*QTRNLR
Trigger: TCTCAGGTTCCTGGTTTGTCATCTACAACAAGCACT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAGTGCTTGTTGTAGATaGCAAACCAGGAACCTGAGA +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMSACCR*QTRNLR
Trigger: TCTCAGGTTCCTGGTTTGTCATCTACAACAAGCACT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAAACTCTGGAACCCTaGATTGATATCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYETLEP*IDIPIL
Trigger: GAGAATGGGGATATCAATTCAGGGTTCCAGAGTTTC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCTTGTGTTTCGACCTTaGATATCTCCTGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMLVFRP*ISPEEE
Trigger: CTCTTCCTCAGGAGATATTCAAGGTCGAAACACAAG...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTCTGTGGCAGGTTGTTaGCGTCCAAGAATCATACTG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSSVAGC*RPRIIL
Trigger: CAGTATGATTCTTGGACGTCAACAACCTGCCACAGA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCGAGTGGCACTAGGCTaGGTAACCTGTGGAATGAAA +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHRVALG*VTCGMK
Trigger: TTTCATTCCACAGGTTACTCAGCCTAGTGCCACTCG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTAGGAAAATAGGGGATTaGAATATCATTGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVRKIGD*NIIGQC
Trigger: ACACTGTCCAATGATATTTCAATCCCCTATTTTCCT...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCTACTACCCAGTACATaGCAAGATGATCTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSLLPST*QDDLPQ
Trigger: TTGGGGGAGATCATCTTGTCATGTACTGGGTAGTAG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATATGGTAAGGCAACAGTaGGAAACATCAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNMVRQQ*ETSAVL
Trigger: AAGTACAGCTGATGTTTCTCACTGTTGCCTTACCAT...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTAAATGTATCATCTTCTaGCAGAAGATGGTCTATGGG +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFKCIIF*QKMVYG
Trigger: CCCATAGACCATCTTCTGGCAGAAGATGATACATTT...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAATTTTCTTCTTTCTATaGCTCTCCACTGCATTGTGT +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRIFFFL*LSTALC
Trigger: ACACAATGCAGTGGAGAGGCATAGAAAGAAGAAAAT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCATCATATTCTTGCTCTaGTTCAGGGCAGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVIIFLL*FRAGEH
Trigger: ATGTTCTCCTGCCCTGAAGCAGAGCAAGAATATGAT...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCCCAGGATCATATTCTTaGTCTGCTTCAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCPGSYS*SASGQE
Trigger: CTCCTGCCCTGAAGCAGAGCAAGAATATGATCCTGG...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGACTTGTTTCCATGGTaGACTTTAGTGGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMDLFPW*TLVAVA
Trigger: AGCAACTGCCACTAAAGTGCACCATGGAAACAAGTC...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGACTTGCTCAACTGGCTaGCCATCTGCTGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIETCSTG*PSAGKE
Trigger: TTCCTTTCCAGCAGATGGGCAGCCAGTTGAGCAAGT...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTTGGTTGGAAACTTCTaGCCTCATCACTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSLVGNF*PHHCWA
Trigger: TGCCCAACAGTGATGAGGGCAGAAGTTTCCAACCAA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAAATATGTGGACAAGATaGTTTCCTCCAAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRNMWTR*FPPKVC
Trigger: ACAGACTTTTGGAGGAAAGCATCTTGTCCACATATT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGAAGACATCACAGGCTaGAAAGCAAAGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSEDITG*KAKSCP
Trigger: TGGACAGCTCTTTGCTTTGCAGCCTGTGATGTCTTC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTAGAAACTACGACTACTaGCAGAGCTGGTTGACATGG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSRNYDY*QSWLTW
Trigger: CCATGTCAACCAGCTCTGGCAGTAGTCGTAGTTTCT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACGTCAAAAATAGCTCTTaGTGCAAGAGCTACTATATC +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNVKNSS*CKSYYI
Trigger: GATATAGTAGCTCTTGCAGCAAGAGCTATTTTTGAC...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGATTTGGTGTTGCTTCTaGCTGTCCTGTGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIEIWCCF*LSCATL
Trigger: GAGAGTGGCACAGGACAGGCAGAAGCAACACCAAAT...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTGCCTCTCTCTTAACTaGCCTGCTTGTTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSCLSLN*PACCCC
Trigger: GCAACAACAACAAGCAGGGCAGTTAAGAGAGAGGCA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTGGTCAGTTCCATGGTaGTTTGGTTGTAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYWSVPW*FGCKES
Trigger: GCTTTCCTTACAACCAAAGCACCATGGAACTGACCA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATCTGCTTCCAACATCCTaGTGTTGGTGCATAATATCT +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNLLPTS*CWCIIS
Trigger: AGATATTATGCACCAACAGCAGGATGTTGGAAGCAG...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCGATGTCAAAAGCCTCTaGATTGGATTATGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: VEANLFFTVTQLQHLNTIDVKSL*IGLWPD
Trigger: ATCTGGCCATAATCCAATGCAGAGGCTTTTGACATC...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTGGGACACCATTTGCTaGTCTAAGCCTCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSWDTIC*SKPLDV
Trigger: GACATCAAGAGGCTTAGAGCAGCAAATGGTGTCCCA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGAATTTTGGAACCACTaGTGTCTTGCAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCEFWNH*CLAGDA
Trigger: GGCATCCCCTGCAAGACAGCAGTGGTTCCAAAATTC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATTTTGTGATAGTGTATaGTGGTCAGGACCTGAATTA +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRFCDSV*WSGPEL
Trigger: TAATTCAGGTCCTGACCAGCATACACTATCACAAAA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACATGGAAGAGCATAAGTaGCTACCTATCAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNMEEHK*LPIKGK
Trigger: CTTCCCTTTGATAGGTAGGCACTTATGCTCTTCCAT...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTCTTCTGCCAGAAGATaGTCTATGGGTTATGCTTTC +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNSSARR*SMGYAF
Trigger: GAAAGCATAACCCATAGACCATCTTCTGGCAGAAGA...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTATTCTCTGTCATTTCTaGCATGGTTACAGTAATAGG +
Preference number: 4 (lower is better)
Translates to: EAVLDADISQHLIMSHCVILCHF*HGYSNR
Trigger: CCTATTACTGTAACCATGCCAGAAATGACAGAGAAT...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATCAGGGCAGGAGAACATaGGATCAGCTCTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHQGRRT*DQLSYS
Trigger: AGAATAGGAGAGCTGATCCCATGTTCTCCTGCCCTG...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTGTGGTCTGATGCCATaGCTTGTTTTCAGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYCGLMP*LVFRRV
Trigger: TACCCTTCTGAAAACAAGCCATGGCATCAGACCACA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATCAAAGAGGAACAGGCTaGTTGGTAGCCAATGCAGGA +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHQRGTG*LVANAG
Trigger: TCCTGCATTGGCTACCAACCAGCCTGTTCCTCTTTG...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGTTGCTGAGGAGCTGTaGGGGATGTTTGTAACACAA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSVAEEL*GMFVTQ
Trigger: TTGTGTTACAAACATCCCCCACAGCTCCTCAGCAAC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCAGGACTTGTTTCCATaGTGCACTTTAGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMQDLFP*CTLVAV
Trigger: AACTGCCACTAAAGTGCACCATGGAAACAAGTCCTG...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATCAGGACTTGTTTCCATaGTGCACTTTAGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYQDLFP*CTLVAV
Trigger: AACTGCCACTAAAGTGCACCATGGAAACAAGTCCTG...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGAACTACTTGCTCAACTaGCTGCCCATCTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLNYLLN*LPICWK
Trigger: TTTCCAGCAGATGGGCAGCCAGTTGAGCAAGTAGTT...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCTGGGGTGGTGCTAGGTaGCTGAAGAATTATAACATT +
Preference number: 4 (lower is better)
Translates to: VEANLFFTVTQLQHLNTIWGGAR*LKNYNI
Trigger: AATGTTATAATTCTTCAGCCACCTAGCACCACCCCA...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCGCAGGAATGATGCTGTaGAGGATCTCTATCATCATT +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVAGMML*RISIII
Trigger: AATGATGATAGAGATCCTCCACAGCATCATTCCTGC...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAAGAATTAAATTCATTTaGTGTTGCTTCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRRIKFI*CCFCLS
Trigger: GGACAGGCAGAAGCAACACCAAATGAATTTAATTCT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTTCAGTCATCAGAGATaGTCCAGGAGGTTGACTGCC +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHFSHQR*SRRLTA
Trigger: GGCAGTCAACCTCCTGGACCATCTCTGATGACTGAA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAGTTTGGTCAGAAATaGTGTCTGGAGTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYEFGQK*CLEFCS
Trigger: TGAGCAGAACTCCAGACACCATTTCTGACCAAACTC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCGATTGGTCAGTTCCATaGTGCTTTGGTTGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVDWSVP*CFGCKE
Trigger: TTCCTTACAACCAAAGCACCATGGAACTGACCAATC...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCAGCTCTTCTCTGTCTaGGAGCTTCCAAAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHQLFSV*ELPKCC
Trigger: GCAACACTTTGGAAGCTCCCAGACAGAGAAGAGCTG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGGTCACAATACTTGGTTaGGACACCATTTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLVTILG*DTICCS
Trigger: AGAGCAGCAAATGGTGTCCCAACCAAGTATTGTGAC...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAACTCTATTTCTCTCTaGCCTGTGTGGAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMNSISL*PVWSTG
Trigger: ACCTGTACTCCACACAGGCCAGAGAGAAATAGAGTT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATGCTGATCTGAAACTCTaGAACCCTGAATTGATATCC +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNADLKL*NPELIS
Trigger: GGATATCAATTCAGGGTTCCAGAGTTTCAGATCAGC...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAATACCATTTCCTGTTaGGATGCTCTGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMNTISC*DALNWW
Trigger: CCACCAGTTCAGAGCATCCCAACAGGAAATGGTATT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTGGATAAGTGAGAGTTaGTCATGTGCATTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYWISES*SCALVA
Trigger: TGCCACCAATGCACATGACCAACTCTCACTTATCCA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACATATGGCTTATGTTATaGGCAGGTCTGTTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNIWLML*AGLFED
Trigger: GTCCTCAAACAGACCTGCCCATAACATAAGCCATAT...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATCAAATAAGGGTACTATaGTCTGAACACTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: QGILVPKAKTWESLIWEYQIRVL*SEHFQN
Trigger: ATTCTGAAAGTGTTCAGACCATAGTACCCTTATTTG...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGGAGCCCTATTTGACATaGAGCAGATGGAAGAGCATA +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLEPYLT*SRWKSI
Trigger: TATGCTCTTCCATCTGCTCCATGTCAAATAGGGCTC...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTGTTTACAACCCAAGTTaGCTCACGTTTATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTVYNPS*LTFMKH
Trigger: ATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAAC...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACAGTACGGTGTTAGTATaGTGTATAGCTGTATACACA +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNSTVLV*CIAVYT
Trigger: TGTGTATACAGCTATACACCATACTAACACCGTACT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAATGCCTCCCGTTTCTaGTCCAAATGTATCATCTTC +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMNASRF*SKCIIF
Trigger: GAAGATGATACATTTGGATCAGAAACGGGAGGCATT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATAGATTTCCTTTCCAGTaGATTGTCGGGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNRFPFQ*IVGSSY
Trigger: ATATGATGACCCGACAATTCACTGGAAAGGAAATCT...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTAATCACTTGCATTGCTaGATTCAGTGGAAGGATATT +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFNHLHC*IQWKDI
Trigger: AATATCCTTCCACTGAATTCAGCAATGCAAGTGATT...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTTGAGGCTGTTGGTTTaGCATGGTAACAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNLRLLV*HGNRKS
Trigger: ACTTTTTCTGTTACCATGTCAAACCAACAGCCTCAA...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTCGCTGGTGGTGGGTTaGATAATTTGCATAGGGGTT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHSLVVG*IICIGV
Trigger: AACCCCTATGCAAATTATTCAACCCACCACCAGCGA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTATCTGTGATATGCTTTaGTTGAGGCTGGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSICDML*LRLAKA
Trigger: TGCTTTGGCCAGCCTCAATCAAAGCATATCACAGAT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCTTGCCCAGCCATCTGTaGTATGCTTTGATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCLPSHL*YALIEA
Trigger: AGCCTCAATCAAAGCATATCACAGATGGCTGGGCAA...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCTATTTGCAGCAGTTTaGGAATTGGCAGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLFAAV*ELAGWL
Trigger: TAGCCAGCCTGCCAATTCTCAAACTGCTGCAAATAG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCTGGACTTTTCTGCTaGCTTAGATTTCGATACAGA +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYAGLFC*LRFRYR
Trigger: TCTGTATCGAAATCTAAGTCAGCAGAAAAGTCCAGC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTGCAAGGTTCAGCAATaGTTTCTACCTCAGAAACAC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYCKVQQ*FLPQKH
Trigger: GTGTTTCTGAGGTAGAAATCATTGCTGAACCTTGCA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGTGATGCTTGGTGGCTaGGAAGTTGAATCCTGTAAA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSVMLGG*EVESCK
Trigger: TTTACAGGATTCAACTTCTCAGCCACCAAGCATCAC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGTTCTGGGGATGGTTATaGTGGTTCCGACTAGTTGAA +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLFWGWL*WFRLVE
Trigger: TTCAACTAGTCGGAACCATCATAACCATCCCCAGAA...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTGGTGCATAATATCTTaGTTGAGATGGTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMWCIIS*LRWFWG
Trigger: TCCCCAGAACCATCTCAATCAAGATATTATGCACCA...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGAAACTCTGGAACCCTaGATTGATATCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSETLEP*IDIPIL
Trigger: GAGAATGGGGATATCAATTCAGGGTTCCAGAGTTTC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATCATTTCAAGCTGATCTaGAACTCTGGAACCCTGAAT +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYHFKLI*NSGTLN
Trigger: ATTCAGGGTTCCAGAGTTTCAGATCAGCTTGAAATG...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTTACTCTGGGGCTGTTaGCTAGCTCCACTTGGTTTA +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLLWGC*LAPLGL
Trigger: TAAACCAAGTGGAGCTAGTCAACAGCCCCAGAGTAA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGTGGGCTATCAGGCATaGAACGAACAATACTTCCTC +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCVGYQA*NEQYFL
Trigger: GAGGAAGTATTGTTCGTTTCATGCCTGATAGCCCAC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCCTCTGTGCTAGGATTTaGGAACATCTGATTAGGAAA +
Preference number: 4 (lower is better)
Translates to: VEANLFFTVTQLQHLNTILCARI*EHLIRK
Trigger: TTTCCTAATCAGATGTTCTCAAATCCTAGCACAGAG...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCTGTCGAGAAGGTGTCTaGTTACACAGCGTGTACCAT +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCCREGV*LHSVYH
Trigger: ATGGTACACGCTGTGTAATCAGACACCTTCTCGACA...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTTTCACAGATGAAAAATaGTTTGAAGACTTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTFTDEK*FEDFRG
Trigger: ACCCCTGAAGTCTTCAAATCATTTTTCATCTGTGAA...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATTCCTGGCTTCCAATaGCTCCCGTTTCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCIPGFQ*LPFLIQ
Trigger: TTGGATCAGAAACGGGAGGCATTGGAAGCCAGGAAT...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTATTTTCTTCTTTCTATaGCTCTCCACTGCATTGTGT +
Preference number: 4 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFIFFFL*LSTALC
Trigger: ACACAATGCAGTGGAGAGGCATAGAAAGAAGAAAAT...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCAGGAGTCACAAGATTaGAAGTCCTCTGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHQESQD*KSSVLA
Trigger: TGCCAGTACAGAGGACTTGCAATCTTGTGACTCCTG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGTGGGCAATTAGTGGCTaGATAGGTAAAGATGGACAA +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLWAISG*IGKDGQ
Trigger: TTGTCCATCTTTACCTATGCAGCCACTAATTGCCCA...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCTTGGTTGGAAACTTCTaGCCTCATCACTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCLVGNF*PHHCWA
Trigger: TGCCCAACAGTGATGAGGGCAGAAGTTTCCAACCAA...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTGGTGTTGGAACATTTTaGACTGAATTATTAGACCCT +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTGVGTF*TELLDP
Trigger: AGGGTCTAATAATTCAGTGCAAAATGTTCCAACACC...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGAAGACATCACAGGCTaGAAAGCAAAGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHEDITG*KAKSCP
Trigger: TGGACAGCTCTTTGCTTTGCAGCCTGTGATGTCTTC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGAACACTCACACTATTTaGCTGAGACACAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLNTHTI*LRHRDR
Trigger: TCTGTCTCTGTGTCTCAGGCAAATAGTGTGAGTGTT...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTACATGTATTAGTTGTTaGATTGCTGGTCACATCTTC +
Preference number: 4 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTTCISC*IAGHIF
Trigger: GAAGATGTGACCAGCAATGCAACAACTAATACATGT...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGGCAGGCACAGTTGTTTaGTCTGAAGTTGGGGATAAA +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLAGTVV*SEVGDK
Trigger: TTTATCCCCAACTTCAGAGCAAACAACTGTGCCTGC...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGCAGGCACAGTTGTTTaGTCTGAAGTTGGGGATAAA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSAGTVV*SEVGDK
Trigger: TTTATCCCCAACTTCAGAGCAAACAACTGTGCCTGC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGGTCAGATTAACCGTTaGAGGCACAGTTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHGQINR*RHSCLL
Trigger: GAGCAAACAACTGTGCCTGCAACGGTTAATCTGACC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTGGTGTCTGGAGTTCTaGTCATCAGGGACATACTTT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSWCLEF*SSGTYF
Trigger: AAAGTATGTCCCTGATGAGCAGAACTCCAGACACCA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTGGTCAGTTCCATGGTaGTTTGGTTGTAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSWSVPW*FGCKES
Trigger: GCTTTCCTTACAACCAAAGCACCATGGAACTGACCA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCTTCCAAAGTGTTGCTaGATTTGTTGCTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSLPKCC*ICCCIC
Trigger: GCAGATGCAGCAACAAATGCAGCAACACTTTGGAAG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCTGAACCTTGCTGTCTaGTTCCAACATCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLNLAV*FQHPAV
Trigger: AACAGCAGGATGTTGGAAGCAGACAGCAAGGTTCAG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGATGTCAAAAGCCTCTaGATTGGATTATGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMDVKSL*IGLWPD
Trigger: ATCTGGCCATAATCCAATGCAGAGGCTTTTGACATC...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCATTTCCTGTTGGGATaGTCTGAACTGGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHHFLLG*SELVGK
Trigger: CTTACCCACCAGTTCAGAGCATCCCAACAGGAAATG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACATCCATTGTTAACTaGACCCATGCAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMTSIVN*THAKLH
Trigger: GTGGAGTTTTGCATGGGTGCAGTTAACAATGGATGT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGTGTGCAGCAGACACTaGTGCCATGGTAATAGATAC +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCVCSRH*CHGNRY
Trigger: GTATCTATTACCATGGCAGCAGTGTCTGCTGCACAC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGTACTGGCACCACATTaGCGGTCTGCTTTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSVLAPH*RSAFVN
Trigger: ATTTACAAAAGCAGACCGCCAATGTGGTGCCAGTAC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTGGCTGCCCATCTGCTaGAAAGGAATTATTCAAGTT +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYWLPIC*KGIIQV
Trigger: AACTTGAATAATTCCTTTCCAGCAGATGGGCAGCCA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTATGGAATCAATACATTaGCTGAAGCGCAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSMESIH*LKRRVW
Trigger: CCAAACCCTGCGCTTCAGCCAATGTATTGATTCCAT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACGTAATAGTTCCTGTTTaGGATGTAAATTCACACTTG +
Preference number: 4 (lower is better)
Translates to: SDNPVSASDMASLHSEDNVIVPV*DVNSHL
Trigger: CAAGTGTGAATTTACATCCCAAACAGGAACTATTAC...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCTTGTTTCAGGAAGCATaGATGCAACTGAGAAACTAC +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVLFQEA*MQLRNY
Trigger: GTAGTTTCTCAGTTGCATCCATGCTTCCTGAAACAA...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGGTCAGAAATGGTGTCTaGAGTTCTGCTCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIEVRNGV*SSAHQG
Trigger: TCCCTGATGAGCAGAACTCCAGACACCATTTCTGAC...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGAGTTTGGTCAGAAATaGTGTCTGGAGTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSEFGQK*CLEFCS
Trigger: TGAGCAGAACTCCAGACACCATTTCTGACCAAACTC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCCTCTGCATTGGATTATaGCCAGATACATGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VEANLFFTVTQLQHLNTILCIGL*PDTCSD
Trigger: ATCTGAACATGTATCTGGCCATAATCCAATGCAGAG...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCTAATTCGAAAAGCCTaGGACTGCATACTCCGCAAT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSLIRKA*DCILRN
Trigger: ATTGCGGAGTATGCAGTCCCAGGCTTTTCGAATTAG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTCTGTACAGAAACATTaGGGCTTGTGTTTCGACCTT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMSVQKH*GLCFDL
Trigger: AAGGTCGAAACACAAGCCCCAATGTTTCTGTACAGA...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATATCATTAGGTACTTGTaGGCTATCAGGCATGAAACG +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYIIRYL*AIRHET
Trigger: CGTTTCATGCCTGATAGCCCACAAGTACCTAATGAT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCTGTGATAGTGTATGCTaGTCAGGACCTGAATTATCA +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVCDSVC*SGPELS
Trigger: TGATAATTCAGGTCCTGACCAGCATACACTATCACA...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATAGCATTAGCATTTATTaGTGGATTCATGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYSISIY*WIHATL
Trigger: GAGGGTGGCATGAATCCACCAATAAATGCTAATGCT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATAGGCTGAGTAACCTGTaGAATGAAAGAAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYRLSNL*NERSIS
Trigger: GCTAATGCTTCTTTCATTCCACAGGTTACTCAGCCT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGAGAAGAGGAAAACTTaGTTGAGCAAACCCAACAGG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSEKRKT*LSKPNR
Trigger: CCTGTTGGGTTTGCTCAACCAAGTTTTCCTCTTCTC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATGTTGGTCATGTGCATTaGTGGCATATCTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHVGHVH*WHIWEK
Trigger: CTTCTCCCAGATATGCCACCAATGCACATGACCAAC...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGTTGGTCATGTGCATTaGTGGCATATCTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHVGHVH*WHIWEK
Trigger: CTTCTCCCAGATATGCCACCAATGCACATGACCAAC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGATATGGCTTATGTTATaGGCAGGTCTGTTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMIWLML*AGLFED
Trigger: GTCCTCAAACAGACCTGCCCATAACATAAGCCATAT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTATCTGCATCTGACATaGCTTCCCTACATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMYLHLT*LPYIQK
Trigger: CTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATA...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGAGCCCTATTTCACATaGAGCAGGCCAAGAATAAGG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHEPYFT*SRPRIR
Trigger: CCTTATTCTTGGCCTGCTCCATGTGAAATAGGGCTC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGAATACGAGGCATACTaGTTCCCAAAGCCAAGACTT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSEYEAY*FPKPRL
Trigger: AAGTCTTGGCTTTGGGAACCAGTATGCCTCGTATTC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGGTAGAGGCTACAGGTaGAAAGATCTAGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCGRGYR*KDLEAL
Trigger: CAGAGCTTCTAGATCTTTCCACCTGTAGCCTCTACC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTAACACCCAAAGAATGTaGAGCAGAAACACTCACACT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSNTQRM*SRNTHT
Trigger: AGTGTGAGTGTTTCTGCTTCACATTCTTTGGGTGTT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGCTTGGTGGTTTATCCTaGGATGTCTCTTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLLGGLS*DVSCCR
Trigger: TCTACAACAAGAGACATCTCAGGATAAACCACCAAG...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCTTGGTGGTTTATCCTaGGATGTCTCTTGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSLGGLS*DVSCCR
Trigger: TCTACAACAAGAGACATCTCAGGATAAACCACCAAG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGATGGTTCCGACTAGTTaGAGGGTTTTCACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIEMVPTS*RVFTAL
Trigger: AAGAGCTGTGAAAACCCTTCAACTAGTCGGAACCAT...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATATGGTTCCGACTAGTTaGAGGGTTTTCACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHMVPTS*RVFTAL
Trigger: AAGAGCTGTGAAAACCCTTCAACTAGTCGGAACCAT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTTCTGGGGATGGTTATaGTGGTTCCGACTAGTTGAA +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHFWGWL*WFRLVE
Trigger: TTCAACTAGTCGGAACCATCATAACCATCCCCAGAA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATAGTACAGGTCATGTCTaGAGATCTAGTCACAATACT +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYSTGHV*RSSHNT
Trigger: AGTATTGTGACTAGATCTTCAGACATGACCTGTACT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGCTTGGTTTAAACGTCTaGCAATCAGAAAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLLGLNV*QSERRI
Trigger: TATCCGCCTTTCTGATTGTCAGACGTTTAAACCAAG...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGATTTTCACTGTCCCTTaGTGGAATACCATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMIFTVP*WNTISC
Trigger: ACAGGAAATGGTATTCCATCAAGGGACAGTGAAAAT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTGCATGAAACTTTGGTaGCAAGTATTTTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMCMKLW*QVFSLS
Trigger: GGACAGTGAAAATACTTGTCACCAAAGTTTCATGCA...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATCTGCTTTTACCCTTATaGCCCGATGCAAAATGCAAG +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHLLLPL*PDAKCK
Trigger: CTTGCATTTTGCATCGGGTCATAAGGGTAAAAGCAG...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGAGGGAGAGAGGGAAATaGATAGCCAAACACATGGAA +
Preference number: 4 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIERERGK*IAKHME
Trigger: TTCCATGTGTTTGGCTATTCATTTCCCTCTCTCCCT...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGGTTAGACTGTTGGAATaGAAGCTCCAAGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLVRLLE*KLQEMQ
Trigger: TTGCATTTCTTGGAGCTTTCATTCCAACAGTCTAAC...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCTTATCAGCATGGACTaGCTCAATCTAAATTTGGTG +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLLISMD*LNLNLV
Trigger: CACCAAATTTAGATTGAGTCAGTCCATGCTGATAAG...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGAGGAACCTAAGGGCTTaGAGAGTTTCTTCACTTTTG +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLRNLRA*RVSSLL
Trigger: CAAAAGTGAAGAAACTCTGCAAGCCCTTAGGTTCCT...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGATCATATTCTTGCTCTaGTTCAGGGCAGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLIIFLL*FRAGEH
Trigger: ATGTTCTCCTGCCCTGAAGCAGAGCAAGAATATGAT...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGAATGTTACAACTACTTaGTCAACTGGCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLNVTTT*STGCPS
Trigger: AGATGGGCAGCCAGTTGAGCAAGTAGTTGTAACATT...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTAATTGTACACAGCTTTaGCCAGCCATCTGTGATATG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSNCTQL*PAICDM
Trigger: CATATCACAGATGGCTGGGCAAAGCTGTGTACAATT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCTGCTAAGTGTTTCCTaGCACCTGGCTTCTTATTCA +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLLSVS*HLASYS
Trigger: TGAATAAGAAGCCAGGTGGCAGGAAACACTTAGCAG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAGAATCTTTGGATTTTaGTGCGGCCATTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMRIFGF*CGHCKM
Trigger: CATTTTGCAATGGCCGCAGCAAAATCCAAAGATTCT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACAAGAGACCTGTGGTTTaGATTGTATCTGATGAATCT +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNKRPVV*IVSDES
Trigger: AGATTCATCAGATACAATGCAAACCACAGGTCTCTT...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGCTACTATATCAGTTTaGTCTACAAAGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMATISV*STKVQL
Trigger: CAGCTGTACCTTTGTAGAGCAAACTGATATAGTAGC...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTGGTGTCTGGAGTTCTaGTCATCAGGGACATACTTT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHWCLEF*SSGTYF
Trigger: AAAGTATGTCCCTGATGAGCAGAACTCCAGACACCA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGAGCTTCCAAAGTGTTaGTGCATTTGTTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHELPKC*CICCCI
Trigger: GATGCAGCAACAAATGCAGCAACACTTTGGAAGCTC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCACAATACAACTAACTaGTTTTACCCTTATGACCCG +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLHNTTN*FYPYDP
Trigger: CGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTG...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTTGTTTCAGGAAGCATaGATGCAACTGAGAAACTAC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYLFQEA*MQLRNY
Trigger: GTAGTTTCTCAGTTGCATCCATGCTTCCTGAAACAA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGTCACAATACTTGGTTaGGACACCATTTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHVTILG*DTICCS
Trigger: AGAGCAGCAAATGGTGTCCCAACCAAGTATTGTGAC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCCCAAACTCTTATTTCTaGGAACATCAAGATAGCTTC +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVPNSYF*EHQDSF
Trigger: GAAGCTATCTTGATGTTCCCAGAAATAAGAGTTTGG...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTTGACTAGCTCCACTTaGTTTAAACGTCTGACAATC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYLTSST*FKRLTI
Trigger: GATTGTCAGACGTTTAAACCAAGTGGAGCTAGTCAA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGGGATGCCTTGATCTCTaGGGAACTGAAGAATTAGCT +
Preference number: 4 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIEGCLDL*GTEELA
Trigger: AGCTAATTCTTCAGTTCCCCAGAGATCAAGGCATCC...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAAGATGGGGAAGACTTaGATCAAAGACAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMKMGKT*IKDSTL
Trigger: CAAAGTACTGTCTTTGATCCAAGTCTTCCCCATCTT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTATCATTAGGTACTTGTaGGCTATCAGGCATGAAACG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSIIRYL*AIRHET
Trigger: CGTTTCATGCCTGATAGCCCACAAGTACCTAATGAT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCAAACCCAACAGGTCTaGGAGGAGATAAAATTGATC +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSQTQQV*EEIKLI
Trigger: GATCAATTTTATCTCCTCCCAGACCTGTTGGGTTTG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCACCCCATCCCATTTTTaGCAGAATATAACAAGAACA +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVTPSHF*QNITRT
Trigger: TGTTCTTGTTATATTCTGCCAAAAATGGGATGGGGT...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTGGGAATCACTGATTTaGGAGTATGACTCACTACCA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSWESLI*EYDSLP
Trigger: TGGTAGTGAGTCATACTCCCAAATCAGTGATTCCCA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACAGTACGGTGTTAGTATaGTGTATAGCTGTATACACA +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNSTVLV*CIAVYT
Trigger: TGTGTATACAGCTATACACCATACTAACACCGTACT...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCATCTTAACACTATCTaGTCCCTTTCTTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLHLNTI*SLSSWK
Trigger: CTTCCAAGAAGAAAGGGACCAGATAGTGTTAAGATG...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATATATTTTTGGGAGGCTaGGATTTAACTTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHIFLGG*DLTCGW
Trigger: CCAGCCACAAGTTAAATCTCAGCCTCCCAAAAATAT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATAGTGGCAAAGGATTCTaGTTAGCAGCCTGTATGATT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHSGKGF*LAACMI
Trigger: AATCATACAGGCTGCTAATCAGAATCCTTTGCCACT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGAAGGGTACTATGGTCTaGACACTTTCAGAATTAAGC +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLKGTMV*TLSELS
Trigger: GCTTAATTCTGAAAGTGTTCAGACCATAGTACCCTT...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCAATGACTGTCACTCATaGCTCAGACATAACTTCGTG +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCNDCHS*LRHNFV
Trigger: CACGAAGTTATGTCTGAGTCATGAGTGACAGTCATT...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGTAGAAACCTACGCATaGAGAATAGAATGCAGACAG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHVETYA*RIECRQ
Trigger: CTGTCTGCATTCTATTCTTCATGCGTAGGTTTCTAC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCTTATCAGCATGGACTaGCTCAATCTAAATTTGGTG +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSLISMD*LNLNLV
Trigger: CACCAAATTTAGATTGAGTCAGTCCATGCTGATAAG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATATTTTCTTCTTTCTATaGCTCTCCACTGCATTGTGT +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYIFFFL*LSTALC
Trigger: ACACAATGCAGTGGAGAGGCATAGAAAGAAGAAAAT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATATCATATTCTTGCTCTaGTTCAGGGCAGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHIIFLL*FRAGEH
Trigger: ATGTTCTCCTGCCCTGAAGCAGAGCAAGAATATGAT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATAATGTTACAACTACTTaGTCAACTGGCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHNVTTT*STGCPS
Trigger: AGATGGGCAGCCAGTTGAGCAAGTAGTTGTAACATT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGTGTTGGAACATTTTaGACTGAATTATTAGACCCT +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYGVGTF*TELLDP
Trigger: AGGGTCTAATAATTCAGTGCAAAATGTTCCAACACC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATAAGAGACCTGTGGTTTaGATTGTATCTGATGAATCT +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYKRPVV*IVSDES
Trigger: AGATTCATCAGATACAATGCAAACCACAGGTCTCTT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATACATGTATTAGTTGTTaGATTGCTGGTCACATCTTC +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYTCISC*IAGHIF
Trigger: GAAGATGTGACCAGCAATGCAACAACTAATACATGT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCAAAAATAGCTCTTGCTaGAAGAGCTACTATATCAGT +
Preference number: 4 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVKNSSC*KSYYIS
Trigger: ACTGATATAGTAGCTCTTGCAGCAAGAGCTATTTTT...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGGTCAAAAATAGCTCTTaGTGCAAGAGCTACTATATC +
Preference number: 4 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLVKNSS*CKSYYI
Trigger: GATATAGTAGCTCTTGCAGCAAGAGCTATTTTTGAC...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCTGCTTCCAACATCCTaGTGTTGGTGCATAATATCT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLLPTS*CWCIIS
Trigger: AGATATTATGCACCAACAGCAGGATGTTGGAAGCAG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTTTTGTGATAGTGTATaGTGGTCAGGACCTGAATTA +
Preference number: 4 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMFCDSV*WSGPEL
Trigger: TAATTCAGGTCCTGACCAGCATACACTATCACAAAA...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGACCCTTATGACCCGATaGAAAATGCAAGCACAAAAC +
Preference number: 4 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIETLMTR*KMQAQN
Trigger: GTTTTGTGCTTGCATTTTGCATCGGGTCATAAGGGT...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTATCAAGTTCTTCTATaGTTTAGCAGGTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSYQVLL*FSRSQV
Trigger: GACCTGAGACCTGCTAAAGCATAGAAGAACTTGATA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTTGAGGACTTTACATTaGAATGTTCAAACTGAGCTT +
Preference number: 4 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNLRTLH*NVQTEL
Trigger: AAGCTCAGTTTGAACATTGCAATGTAAAGTCCTCAA...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATCTGACCACATACGCGTaGCAGAAAAAGATTACAGTT +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHLTTYA*QKKITV
Trigger: AACTGTAATCTTTTTCTGGCACGCGTATGTGGTCAG...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATTGCAGCAGACACTGCTaGCATGGTAATAGATACAAA +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHCSRHC*HGNRYK
Trigger: TTTGTATCTATTACCATGGCAGCAGTGTCTGCTGCA...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR GCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCTGCAGCAGACACTGCTaGCATGGTAATAGATACAAA +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCCSRHC*HGNRYK
Trigger: TTTGTATCTATTACCATGGCAGCAGTGTCTGCTGCA...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CCA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATATTCTCTGTCATTTCTaGCATGGTTACAGTAATAGG +
Preference number: 4 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYILCHF*HGYSNR
Trigger: CCTATTACTGTAACCATGCCAGAAATGACAGAGAAT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGATTTAACTTGTGGCTaGGCAATTAGTGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHDLTCG*AISGCI
Trigger: TATGCAGCCACTAATTGCCCAGCCACAAGTTAAATC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGGTCTTGGTAATATGTaGACAAGATGCTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCGLGNM*TRCFPP
Trigger: TGGAGGAAAGCATCTTGTCCACATATTACCAAGACC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCAAAAGCCTCTGCATTaGATTATGGCCAGATACATG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHQKPLH*IMARYM
Trigger: CATGTATCTGGCCATAATCCAATGCAGAGGCTTTTG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCTTCAATTGCAGAGGATaGACCACACTGTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCFNCRG*TTLCIP
Trigger: AGGAATACACAGTGTGGTCCATCCTCTGCAATTGAA...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTCTGTACAGAAACATTaGGGCTTGTGTTTCGACCTT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHSVQKH*GLCFDL
Trigger: AAGGTCGAAACACAAGCCCCAATGTTTCTGTACAGA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTGTGATAGTGTATGCTaGTCAGGACCTGAATTATCA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSCDSVC*SGPELS
Trigger: TGATAATTCAGGTCCTGACCAGCATACACTATCACA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATTATCTGCATCTGACATaGCTTCCCTACATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHYLHLT*LPYIQK
Trigger: CTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATA...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGACTGTGGTGGTAACTaGAACAACAAAAGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCDCGGN*NNKSVL
Trigger: CAAAACACTTTTGTTGTTTCAGTTACCACCACAGTC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTTGAGGCTGTTGGTTTaGCATGGTAACAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLRLLV*HGNRKS
Trigger: ACTTTTTCTGTTACCATGTCAAACCAACAGCCTCAA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGAGTACACCATGCAGTTaGAAACGAAAGATAACTTGT +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLSTPCS*KRKITC
Trigger: ACAAGTTATCTTTCGTTTTCAACTGCATGGTGTACT...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTAGTACACCATGCAGTTaGAAACGAAAGATAACTTGT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSSTPCS*KRKITC
Trigger: ACAAGTTATCTTTCGTTTTCAACTGCATGGTGTACT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGTGCAAATACTATGTCTaGACACAGCTAAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIECKYYV*TQLSRK
Trigger: TTTCCTGCTTAGCTGTGTTCAGACATAGTATTTGCA...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGAAGCCATGTATGAACTaGAGTCTTACATACACATGC +
Preference number: 4 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIEKPCMN*SLTYTC
Trigger: GCATGTGTATGTAAGACTTCAGTTCATACATGGCTT...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATATCTTTGGATTTTGCTaGGGCCATTGCAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHIFGFC*GHCKMF
Trigger: GAACATTTTGCAATGGCCGCAGCAAAATCCAAAGAT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATAGAATCTTTGGATTTTaGTGCGGCCATTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHRIFGF*CGHCKM
Trigger: CATTTTGCAATGGCCGCAGCAAAATCCAAAGATTCT...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGTATCTGATGAATCTTaGTCAACTCTGCAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCVSDES*STLQGS
Trigger: TGAACCTTGCAGAGTTGAGCAAGATTCATCAGATAC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATAATGTAGTTAAACCTTaGCCCTTTAAGAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHNVVKP*PFKRPV
Trigger: CACAGGTCTCTTAAAGGGGCAAGGTTTAACTACATT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGCTACTATATCAGTTTaGTCTACAAAGGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCATISV*STKVQL
Trigger: CAGCTGTACCTTTGTAGAGCAAACTGATATAGTAGC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTTCAGTTTGCCTCAATaGAGGAGTCACAAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHFSLPQ*RSHKVV
Trigger: AACAACTTTGTGACTCCTGCATTGAGGCAAACTGAA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGATATCCCCATTCTCTaGTCTGAATTAGAAGATGTC +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCDIPIL*SELEDV
Trigger: GACATCTTCTAATTCAGAGCAGAGAATGGGGATATC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATACATGTCTGTGCACATaGACGCACAAATACATTTGT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHTCLCT*THKYIC
Trigger: ACAAATGTATTTGTGCGTGCATGTGCACAGACATGT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCACAATACAACTAACTaGTTTTACCCTTATGACCCG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHHNTTN*FYPYDP
Trigger: CGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTATCAAGTTCTTCTATaGTTTAGCAGGTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHYQVLL*FSRSQV
Trigger: GACCTGAGACCTGCTAAAGCATAGAAGAACTTGATA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCTTTTGGTATCACCTTTaGCCTTTCATTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCFWYHL*PFILHR
Trigger: CCTGTGAAGAATGAAAGGGCAAAGGTGATACCAAAA...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCTAATGACAGGATTATaGAGTCATCCAAAATTCCCC +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLMTGL*SHPKFP
Trigger: GGGGAATTTTGGATGACTGCATAATCCTGTCATTAG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTTGAAATTGGCACACTaGACCTTTCAAGTACAAAGA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSLKLAH*TFQVQR
Trigger: TCTTTGTACTTGAAAGGTCCAGTGTGCCAATTTCAA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGAAAGCTGTTTCATTTTaGTATCACCTTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLKAVSF*YHLCPF
Trigger: GAAAGGGCAAAGGTGATACCAAAATGAAACAGCTTT...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCATCTTAACACTATCTaGTCCCTTTCTTCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHHLNTI*SLSSWK
Trigger: CTTCCAAGAAGAAAGGGACCAGATAGTGTTAAGATG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATATGATTACTATCTGTTaGCCTACTGTTTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHMITIC*PTVWLE
Trigger: TTCCAACCAAACAGTAGGTCAACAGATAGTAATCAT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTTTAAAGAAATGGTTTaGGGCTGTTGGTTTGACATG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHFKEMV*GCWFDM
Trigger: CATGTCAAACCAACAGCCTCAAACCATTTCTTTAAA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR TCA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCTTTAAGAGTGGCTCTTaGATCTGTGAATTTGGTATG +
Preference number: 4 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCFKSGS*ICEFGM
Trigger: CATACCAAATTCACAGATTCAAGAGCCACTCTTAAA...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR TCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTTTAAGAGTGGCTCTTaGATCTGTGAATTTGGTATG +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHFKSGS*ICEFGM
Trigger: CATACCAAATTCACAGATTCAAGAGCCACTCTTAAA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGTGTACTTGTCAAGTCTaGACTCTTACTAATGCTCAT +
Preference number: 4 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIECTCQV*TLTNAH
Trigger: ATGAGCATTAGTAAGAGTGCAGACTTGACAAGTACA...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTGTACTTGTCAAGTCTaGACTCTTACTAATGCTCAT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHCTCQV*TLTNAH
Trigger: ATGAGCATTAGTAAGAGTGCAGACTTGACAAGTACA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATAATATGTGGACAAGATaGTTTCCTCCAAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHNMWTR*FPPKVC
Trigger: ACAGACTTTTGGAGGAAAGCATCTTGTCCACATATT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR GCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTAAAAATAGCTCTTGCTaGAAGAGCTACTATATCAGT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSKNSSC*KSYYIS
Trigger: ACTGATATAGTAGCTCTTGCAGCAAGAGCTATTTTT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGTATTTAGCTGTTCTTaGGAATATTCAGTCATCAGA +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSVFSCS*EYSVIR
Trigger: TCTGATGACTGAATATTCCCAAGAACAGCTAAATAC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCCAAACTCTTATTTCTaGGAACATCAAGATAGCTTC +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHPNSYF*EHQDSF
Trigger: GAAGCTATCTTGATGTTCCCAGAAATAAGAGTTTGG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CCA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCCAATTATTCACAGATaGTCACATTTTTCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSPIIHR*SHFSSD
Trigger: ATCTGAGGAAAAATGTGACCATCTGTGAATAATTGG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CCA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGTATTTAGCTGTTCTTaGGAATATTCAGTCATCAGA +
Preference number: 4 (lower is better)
Translates to: ENTKLNSADETSIVNCTHVFSCS*EYSVIR
Trigger: TCTGATGACTGAATATTCCCAAGAACAGCTAAATAC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS TCA 90 bp ACCCCCGCCTGGGTCATGATCCCAGGAGGGGAAGGCAGGAGTGTCTaGCCGTCTGGGCGAATCTCTCCGTCCGCGGCCACCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TPAWVMIPGGEGRSV*PSGRISPSAATACS
Trigger: GGAGCAGGCGGTGGCCGCGGACGGAGAGATTCGCCCAGACGGTCAGACACTCCTGCCTTCCCCTCCTGGGATCATGACCCAGGCGGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS CCA 90 bp CTGGGTCATGATCCCAGGAGGGGAAGGCAGGAGTGTCTGACCGTCTaGGCGAATCTCTCCGTCCGCGGCCACCGCCTGCTCCTCCGGGGC +
Preference number: 5 (lower is better)
Translates to: LGHDPRRGRQECLTV*ANLSVRGHRLLLRG
Trigger: GCCCCGGAGGAGCAGGCGGTGGCCGCGGACGGAGAGATTCGCCCAGACGGTCAGACACTCCTGCCTTCCCCTCCTGGGATCATGACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CAA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACCCCCGCCGCCTCTTTTaGCGGCCACCGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDPRRLF*RPPQPL
Trigger: CAGCGGCTGCGGTGGCCGCAAAAAGAGGCGGCGGGG...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CAA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCCCCCGCCGCCTCTTTTaGCGGCCACCGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIPRRLF*RPPQPL
Trigger: CAGCGGCTGCGGTGGCCGCAAAAAGAGGCGGCGGGG...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CAA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCTACTGCCAGAGCTGGTaGACATGGGAGAGTCGGCCT +
Preference number: 5 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLYCQSW*TWESRP
Trigger: AGGCCGACTCTCCCATGTCAACCAGCTCTGGCAGTA...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS TCA 90 bp GTCTGGGAGCTTCCAAAGTGTTGCTGCATTTGTTGCTGCATCTGCTaGTGGTGGGGATGTGGCTGGCCAGTCTTGGATCGGGATTGGTCA +
Preference number: 5 (lower is better)
Translates to: VWELPKCCCICCCIC*WWGCGWPVLDRDWS
Trigger: TGACCAATCCCGATCCAAGACTGGCCAGCCACATCCCCACCATCAGCAGATGCAGCAACAAATGCAGCAACACTTTGGAAGCTCCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp ATCGCCATTTCCATGAGACACAGATGGATGTGGCAACGCTGGCCTTaGAACCCCATGCATGTTGGTTGTGACTGGAGGGTTCATGTGGCC +
Preference number: 5 (lower is better)
Translates to: IAISMRHRWMWQRWP*NPMHVGCDWRVHVA
Trigger: GGCCACATGAACCCTCCAGTCACAACCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCACATCCATCTGTGTCTCATGGAAATGGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp ATGTGGCAACGCTGGCCTTGCAACCCCATGCATGTTGGTTGTGACTaGAGGGTTCATGTGGCCCTTGGTGGCATGACTCTCAGTAATCCT +
Preference number: 5 (lower is better)
Translates to: MWQRWPCNPMHVGCD*RVHVALGGMTLSNP
Trigger: AGGATTACTGAGAGTCATGCCACCAAGGGCCACATGAACCCTCCAGTCACAACCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp TACAGCAGGGCCTTGATCGCCATTTCCATGAGACACAGATGGATGTaGCAACGCTGGCCTTGCAACCCCATGCATGTTGGTTGTGACTGG +
Preference number: 5 (lower is better)
Translates to: YSRALIAISMRHRWM*QRWPCNPMHVGCDW
Trigger: CCAGTCACAACCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCACATCCATCTGTGTCTCATGGAAATGGCGATCAAGGCCCTGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCTGTAATTCCAGTACTTaGGGAGGCCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLCNSST*GGRGGW
Trigger: CCACCCACCTCGGCCTCCCAAAGTACTGGAATTACA...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS CCA 90 bp GCCTTGATCGCCATTTCCATGAGACACAGATGGATGTGGCAACGCTaGCCTTGCAACCCCATGCATGTTGGTTGTGACTGGAGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: ALIAISMRHRWMWQR*PCNPMHVGCDWRVH
Trigger: ATGAACCCTCCAGTCACAACCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCACATCCATCTGTGTCTCATGGAAATGGCGATCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp TTGACGTACAGCAGGGCCTTGATCGCCATTTCCATGAGACACAGATaGATGTGGCAACGCTGGCCTTGCAACCCCATGCATGTTGGTTGT +
Preference number: 5 (lower is better)
Translates to: LTYSRALIAISMRHR*MWQRWPCNPMHVGC
Trigger: ACAACCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCACATCCATCTGTGTCTCATGGAAATGGCGATCAAGGCCCTGCTGTACGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCTGAGCCTTCAGTGTaGGGGCAGTCTAACTTGCTC +
Preference number: 5 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLAEPSV*GQSNLL
Trigger: GAGCAAGTTAGACTGCCCCAACACTGAAGGCTCAGC...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGCCGTTGCAGGCACAGTaGTTTGCTCTGAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLPLQAQ*FALKLG
Trigger: CCCCAACTTCAGAGCAAACAACTGTGCCTGCAACGG...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGGAGGGCAGAGTATTTaGCGGATCTACCGGGATGAG +
Preference number: 5 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLGGQSI*RIYRDE
Trigger: CTCATCCCGGTAGATCCGCAAAATACTCTGCCCTCC...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGATGTGGCTGGCCAGTCTaGGATCGGGATTGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: RCLITQRVPSQLALCYNRCGWPV*DRDWSV
Trigger: AACTGACCAATCCCGATCCAAGACTGGCCAGCCACA...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCGCAACCCCATGCATGTaGGTTGTGACTGGAGGGTTC +
Preference number: 5 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIATPCM*VVTGGF
Trigger: GAACCCTCCAGTCACAACCAACATGCATGGGGTTGC...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS CCA 90 bp ATAGAAGGAGGGCAGAGTATTTTGCGGATCTACCGGGATGAGGGCTaGAGTTCGAGTGGCACTAGGCTGAGTAACCTGTGGAATGAAAGA +
Preference number: 5 (lower is better)
Translates to: IEGGQSILRIYRDEG*SSSGTRLSNLWNER
Trigger: TCTTTCATTCCACAGGTTACTCAGCCTAGTGCCACTCGAACTCCAGCCCTCATCCCGGTAGATCCGCAAAATACTCTGCCCTCCTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGAAGAGGAACAGGCTGGTaGGTAGCCAATGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: RCLITQRVPSQLALCYNRRGTGW*VANAGT
Trigger: AGTTCCTGCATTGGCTACCAACCAGCCTGTTCCTCT...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAACCTGTAGATGCTGACTaGCCTGGGTTTGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKPVDAD*PGFAAV
Trigger: AACAGCAGCAAACCCAGGCAAGTCAGCATCTACAGG...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGTGGCAACGCTGGCCTaGCAACCCCATGCATGTTGG +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRVATLA*QPHACW
Trigger: CCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCAC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS TCA 90 bp CTGCTGAGCCTTCAGTGTTGGGGCAGTCTAACTTGCTCACATCTCTaGCTGAATTCAGGGGACACGCTGACTTGTTTGCTGCTAAGTGTT +
Preference number: 5 (lower is better)
Translates to: LLSLQCWGSLTCSHL*LNSGDTLTCLLLSV
Trigger: AACACTTAGCAGCAAACAAGTCAGCGTGTCCCCTGAATTCAGTCAGAGATGTGAGCAAGTTAGACTGCCCCAACACTGAAGGCTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 90 bp TGCGGATCTACCGGGATGAGGGCTGGAGTTCGAGTGGCACTAGGCTaGGTAACCTGTGGAATGAAAGAAGCATTAGCATTTATTGGTGGA +
Preference number: 5 (lower is better)
Translates to: CGSTGMRAGVRVALG*VTCGMKEALAFIGG
Trigger: TCCACCAATAAATGCTAATGCTTCTTTCATTCCACAGGTTACTCAGCCTAGTGCCACTCGAACTCCAGCCCTCATCCCGGTAGATCCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp ATGCCTCCCGTTTCTGATCCAAATGTATCATCTTCTGCCAGAAGATaGTCTATGGGTTATGCTTTCTTCTTACCGCCGGCTGCGCGGTCT +
Preference number: 5 (lower is better)
Translates to: MPPVSDPNVSSSARR*SMGYAFFLPPAARS
Trigger: AGACCGCGCAGCCGGCGGTAAGAAGAAAGCATAACCCATAGACCATCTTCTGGCAGAAGATGATACATTTGGATCAGAAACGGGAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS CCA 90 bp AAATCACCTCTGAAGTCCTGTATGCTCAGGCAGGACTTGTTTCCATaGTGCACTTTAGTGGCAGTTGCTGAGGAGCTGTGGGGGATGTTT +
Preference number: 5 (lower is better)
Translates to: KSPLKSCMLRQDLFP*CTLVAVAEELWGMF
Trigger: AAACATCCCCCACAGCTCCTCAGCAACTGCCACTAAAGTGCACCATGGAAACAAGTCCTGCCTGAGCATACAGGACTTCAGAGGTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp CGGGATGAGGGCTGGAGTTCGAGTGGCACTAGGCTGAGTAACCTGTaGAATGAAAGAAGCATTAGCATTTATTGGTGGATTCATGCCACC +
Preference number: 5 (lower is better)
Translates to: RDEGWSSSGTRLSNL*NERSISIYWWIHAT
Trigger: GGTGGCATGAATCCACCAATAAATGCTAATGCTTCTTTCATTCCACAGGTTACTCAGCCTAGTGCCACTCGAACTCCAGCCCTCATCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTACTGCCAGAGCTGGTaGACATGGGAGAGTCGGCCT +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVYCQSW*TWESRP
Trigger: AGGCCGACTCTCCCATGTCAACCAGCTCTGGCAGTA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGACACTGAACTTCAGTTaGCCTCAATGCAGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLTLNFS*PQCRSH
Trigger: GTGACTCCTGCATTGAGGCAAACTGAAGTTCAGTGT...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGCAGTTCCATGGTGCTTaGGTTGTAAGGAAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLQFHGA*VVRKAE
Trigger: CTCAGCTTTCCTTACAACCAAAGCACCATGGAACTG...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAAGTCTTGGATCGGGATaGGTCAGTTCCATGGTGCTT +
Preference number: 5 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKSLGSG*VSSMVL
Trigger: AAGCACCATGGAACTGACCAATCCCGATCCAAGACT...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS GCA 90 bp CTGTATGATTACTATCTGTTGACCTACTGTTTGGTTGGAAACTTCTaGCCTCATCACTGTTGGGCATGGGGTGGTGCTAGGTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LYDYYLLTYCLVGNF*PHHCWAWGGARWLK
Trigger: CTTCAGCCACCTAGCACCACCCCATGCCCAACAGTGATGAGGGCAGAAGTTTCCAACCAAACAGTAGGTCAACAGATAGTAATCATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp CACTGTAGCTGTACTTGTCAAGTCTGCACTCTTACTAATGCTCATTaGAGAAGAATCACCTGCAGTTCTGGGAGGCTGCGAGCAGACTGT +
Preference number: 5 (lower is better)
Translates to: HCSCTCQVCTLTNAH*RRITCSSGRLRADC
Trigger: ACAGTCTGCTCGCAGCCTCCCAGAACTGCAGGTGATTCTTCTCCAATGAGCATTAGTAAGAGTGCAGACTTGACAAGTACAGCTACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp ATTGATGGGGAGTCGAACAGAACCAGGAGGTGGAGCAGGGAGGAGTaGCAAAGGATTCTGATTAGCAGCCTGTATGATTACTATCTGTTG +
Preference number: 5 (lower is better)
Translates to: IDGESNRTRRWSREE*QRILISSLYDYYLL
Trigger: CAACAGATAGTAATCATACAGGCTGCTAATCAGAATCCTTTGCCACTCCTCCCTGCTCCACCTCCTGGTTCTGTTCGACTCCCCATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCCTGGCTAATAGACAATaGTACACAGCTTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AQFQVKCRNRVEATGGKILANRQ*YTALPS
Trigger: GCTGGGCAAAGCTGTGTACAATTGTCTATTAGCCAG...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TGTTGGCTATTACTGTTGCCCTCTGGATGTACACAGCCACAGGCGCACTACCTCGTTAGCTGTAGTGGTTaGACTATTTGCAGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: CWLLLLPSGCTQPQAHYLVSCSG*TICSSL
Trigger: CAAACTGCTGCAAATAGTCAAACCACTACAGCTAAC...GAGGTAGTGCGCCTGTGGCTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCGATGGAATCAATACATaGGCTGAAGCGCAGGGTTTG +
Preference number: 5 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIDGINT*AEAQGL
Trigger: CAAACCCTGCGCTTCAGCCAATGTATTGATTCCATC...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAATTCCTAGAGAACAACTaGGTTTCTCAAGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKFLENN*VSQGAS
Trigger: AGAGGCCCCTTGAGAAACCAAGTTGTTCTCTAGGAA...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACCTGCCCTGCTTGTTGTaGTTGCTGTTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNLPCLL*LLLLLL
Trigger: CAGCAGCAGCAACAGCAACAACAACAAGCAGGGCAG...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAACTTCTCTGTGGCAGGTaGTTGACGTCCAAGAATCAT +
Preference number: 5 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKLLCGR*LTSKNH
Trigger: ATGATTCTTGGACGTCAACAACCTGCCACAGAGAAG...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS TCA 90 bp TGCATGTTGGTTGTGACTGGAGGGTTCATGTGGCCCTTGGTGGCATaGCTCTCAGTAATCCTCATGGGATTGGATTTCTGTACAGAAACA +
Preference number: 5 (lower is better)
Translates to: CMLVVTGGFMWPLVA*LSVILMGLDFCTET
Trigger: TGTTTCTGTACAGAAATCCAATCCCATGAGGATTACTGAGAGTCATGCCACCAAGGGCCACATGAACCCTCCAGTCACAACCAACATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 90 bp GGCATGAAACGAACAATACTTCCTCTCTTCTCTGTGGCAGGTTGTTaGCGTCCAAGAATCATACTGCCACCAGTAGAGAGAGGAAGATGG +
Preference number: 5 (lower is better)
Translates to: GMKRTILPLFSVAGC*RPRIILPPVERGRW
Trigger: CCATCTTCCTCTCTCTACTGGTGGCAGTATGATTCTTGGACGTCAACAACCTGCCACAGAGAAGAGAGGAAGTATTGTTCGTTTCATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATAGGGGACACGCTGACTaGTTTGCTGCTAAGTGTTTC +
Preference number: 5 (lower is better)
Translates to: QGILVPKAKTWESLIWEYRGHAD*FAAKCF
Trigger: GAAACACTTAGCAGCAAACAAGTCAGCGTGTCCCCT...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATACTTGTTACAGATTCTaGGGAGGGTGGGCTGGACTT +
Preference number: 5 (lower is better)
Translates to: QGILVPKAKTWESLIWEYTCYRF*GGWAGL
Trigger: AAGTCCAGCCCACCCTCCCAAGAATCTGTAACAAGT...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACAGATGGTCCAGGAGGTaGACTGCCATAGGAGCTAGA +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNRWSRR*TAIGAR
Trigger: TCTAGCTCCTATGGCAGTCAACCTCCTGGACCATCT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAAGATGGTCCAGGAGGTaGACTGCCATAGGAGCTAGA +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRRWSRR*TAIGAR
Trigger: TCTAGCTCCTATGGCAGTCAACCTCCTGGACCATCT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGTGGCAACGCTGGCCTaGCAACCCCATGCATGTTGG +
Preference number: 5 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMVATLA*QPHACW
Trigger: CCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCAC...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACACGTACAGCAGGGCCTaGATCGCCATTTCCATGAGA +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNTYSRA*IAISMR
Trigger: TCTCATGGAAATGGCGATCAAGGCCCTGCTGTACGT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS TCA 90 bp TTGATTGAGATGGTTCTGGGGATGGTTATGATGGTTCCGACTAGTTaGAGGGTTTTCACAGCTCTTCTCTGTCTGGGAGCTTCCAAAGTG +
Preference number: 5 (lower is better)
Translates to: LIEMVLGMVMMVPTS*RVFTALLCLGASKV
Trigger: CACTTTGGAAGCTCCCAGACAGAGAAGAGCTGTGAAAACCCTTCAACTAGTCGGAACCATCATAACCATCCCCAGAACCATCTCAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 90 bp AGCTCCACTTGGTTTAAACGTCTGACAATCAGAAAGGCGGATATCTaGGGCCACAGTATGGTCCACACGACCCTGCATATTATGAATAGC +
Preference number: 5 (lower is better)
Translates to: SSTWFKRLTIRKADI*GHSMVHTTLHIMNS
Trigger: GCTATTCATAATATGCAGGGTCGTGTGGACCATACTGTGGCCTCAGATATCCGCCTTTCTGATTGTCAGACGTTTAAACCAAGTGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 90 bp AAGACAGTACTTTGCCTTTGGTTTCCAGAACGATTCCTTTCAGGCTaGCGAATTTTGGAACCACTGCTGTCTTGCAGGGGATGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: KTVLCLWFPERFLSG*RILEPLLSCRGCLD
Trigger: ATCAAGGCATCCCCTGCAAGACAGCAGTGGTTCCAAAATTCGTCAGCCTGAAAGGAATCGTTCTGGAAACCAAAGGCAAAGTACTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp CTGTTGACCTACTGTTTGGTTGGAAACTTCTGCCCTCATCACTGTTaGGCATGGGGTGGTGCTAGGTGGCTGAAGAATTATAACATTTTG +
Preference number: 5 (lower is better)
Translates to: LLTYCLVGNFCPHHC*AWGGARWLKNYNIL
Trigger: CAAAATGTTATAATTCTTCAGCCACCTAGCACCACCCCATGCCCAACAGTGATGAGGGCAGAAGTTTCCAACCAAACAGTAGGTCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp GAGGCTGGCCAAAGCACCAAATGTATTCAGGGCAACATTGGTATTTaGATCTTCGCTGGTGGTGGGTTGAATAATTTGCATAGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: EAGQSTKCIQGNIGI*IFAGGGLNNLHRGL
Trigger: CAAACCCCTATGCAAATTATTCAACCCACCACCAGCGAAGATCCAAATACCAATGTTGCCCTGAATACATTTGGTGCTTTGGCCAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCAGAGTTTCTTCACTTTaGATTCCTGGCTTCCAATGC +
Preference number: 5 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIRVSSL*IPGFQC
Trigger: GCATTGGAAGCCAGGAATCAAAAGTGAAGAAACTCT...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATCCAGGATCATATTCTaGCTCTGCTTCAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRSRIIF*LCFRAG
Trigger: TCCTGCCCTGAAGCAGAGCAAGAATATGATCCTGGA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp AGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGGCCCTTTGCTATAACAGATTCCTTTCCAGTGAATaGTCGGGTCATCATATAAGC +
Preference number: 5 (lower is better)
Translates to: RCLITQRVPSQLALCYNRFLSSE*SGHHIS
Trigger: GCTTATATGATGACCCGACAATTCACTGGAAAGGAA...TCTGTTATAGCAAAGGGCCAGCTGGGATGGTACACGCTGTGTAATCAGACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATGGCACCAAGCACATTaGATTCGCTTTCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRWHQAH*IRFQRW
Trigger: CCACCTCTGAAAGCGAATCAAATGTGCTTGGTGCCA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGTGCAAAGAATGATGTaGGTGAGGCTCAGATTCAAT +
Preference number: 5 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKVQRMM*VRLRFN
Trigger: ATTGAATCTGAGCCTCACCAACATCATTCTTTGCAC...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACACTTGTTACAGATTCTaGGGAGGGTGGGCTGGACTT +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNTCYRF*GGWAGL
Trigger: AAGTCCAGCCCACCCTCCCAAGAATCTGTAACAAGT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACAAGGTGAGATACACCTaGAGCTGGAACATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNKVRYT*SWNMLL
Trigger: CAGCAGCATGTTCCAGCTCAAGGTGTATCTCACCTT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGACATCTGAACTTCCTGTaGCAGAGTCCTCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRHLNFL*QSPLLV
Trigger: CACCAACAGAGGACTCTGCAACAGGAAGTTCAGATG...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp CAGCTGTACTTGTCGAGAAGGTGTCTGATTACACAGCGTGTACCATCCCAGCTGTCCAACATCCTGCTGTaGGTGCATAATATCTTGATT +
Preference number: 5 (lower is better)
Translates to: QLYLSRRCLITQRVPSQLSNILL*VHNILI
Trigger: AATCAAGATATTATGCACCAACAGCAGGATGTTGGA...CAGCTGGGATGGTACACGCTGTGTAATCAGACACCTTCTCGACAAGTACAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATCTCTGGAACCCTGAATaGATATCCCCATTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: QGILVPKAKTWESLIWEYLWNPE*ISPFSA
Trigger: AGCAGAGAATGGGGATATCAATTCAGGGTTCCAGAG...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTACGTACAGCAGGGCCTaGATCGCCATTTCCATGAGA +
Preference number: 5 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFTYSRA*IAISMR
Trigger: TCTCATGGAAATGGCGATCAAGGCCCTGCTGTACGT...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCCTTGCAGGGGATGCCTaGATCTCTGGGGAACTGAAG +
Preference number: 5 (lower is better)
Translates to: VEANLFFTVTQLQHLNTILAGDA*ISGELK
Trigger: CTTCAGTTCCCCAGAGATCAAGGCATCCCCTGCAAG...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATATGGGCAGGTCTGTTaGAGGACTGCTTGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRYGQVC*RTAWKS
Trigger: ACTCTTCCAAGCAGTCCTCAAACAGACCTGCCCATA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATTGTTGGCTATTACTGTaGCCCTCTGGATGTACACAG +
Preference number: 5 (lower is better)
Translates to: QGILVPKAKTWESLIWEYCWLLL*PSGCTQ
Trigger: CTGTGTACATCCAGAGGGCAACAGTAATAGCCAACA...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCTGTTTACAACCCAAGTaGGCTCACGTTTATGAAGCA +
Preference number: 5 (lower is better)
Translates to: AQFQVKCRNRVEATGGKICLQPK*AHVYEA
Trigger: TGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACA...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CAA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCCAGATGAAAAATGATTaGAAGACTTCAGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIQMKND*KTSGVG
Trigger: TCCCACCCCTGAAGTCTTCAAATCATTTTTCATCTG...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS TCA 90 bp TTTAATACTGGAGTCACAGCAGAAGATGGTGTCTGGCTTAAGGGCTaGATAGTGTTTCCTGCCAGTTGCAAAGTAGTCCACGTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: FNTGVTAEDGVWLKG*IVFPASCKVVHVVC
Trigger: ACAGACAACGTGGACTACTTTGCAACTGGCAGGAAACACTATTCAGCCCTTAAGCCAGACACCATCTTCTGCTGTGACTCCAGTATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 90 bp AGGCTGGCTAATAGACAATTGTACACAGCTTTGCCCAGCCATCTGTaGTATGCTTTGATTGAGGCTGGCCAAAGCACCAAATGTATTCAG +
Preference number: 5 (lower is better)
Translates to: RLANRQLYTALPSHL*YALIEAGQSTKCIQ
Trigger: CTGAATACATTTGGTGCTTTGGCCAGCCTCAATCAAAGCATATCACAGATGGCTGGGCAAAGCTGTGTACAATTGTCTATTAGCCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 90 bp CTTGGTTTCTCAAGGGGCCTCTCCATAGTTGCTTCAATTGAACCCTaGGAATTAAATTCATTTGGTGTTGCTTCTGCCTGTCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: LGFSRGLSIVASIEP*ELNSFGVASACPVP
Trigger: TGGCACAGGACAGGCAGAAGCAACACCAAATGAATTTAATTCTCAGGGTTCAATTGAAGCAACTATGGAGAGGCCCCTTGAGAAACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp GCCAACTCTCCCCTTCTCAAGGTTCTCCTGGTCAAAAATAGCTCTTaGTGCAAGAGCTACTATATCAGTTTGCTCTACAAAGGTACAGCT +
Preference number: 5 (lower is better)
Translates to: ANSPLLKVLLVKNSS*CKSYYISLLYKGTA
Trigger: AGCTGTACCTTTGTAGAGCAAACTGATATAGTAGCTCTTGCAGCAAGAGCTATTTTTGACCAGGAGAACCTTGAGAAGGGGAGAGTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp TGGGACACCATTTGCTGCTCTAAGCCTCTTGATGTCAAAAGCCTCTaGATTGGATTATGGCCAGATACATGTTCAGATGAAACCCCTGAA +
Preference number: 5 (lower is better)
Translates to: WDTICCSKPLDVKSL*IGLWPDTCSDETPE
Trigger: TTCAGGGGTTTCATCTGAACATGTATCTGGCCATAATCCAATGCAGAGGCTTTTGACATCAAGAGGCTTAGAGCAGCAAATGGTGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp TTGTTGCATTGCTGGTCACATCTTCTCTTGTTGTTTCAGGAAGCATaGATGCAACTGAGAAACTACGACTACTGCCAGAGCTGGTTGACA +
Preference number: 5 (lower is better)
Translates to: LLHCWSHLLLLFQEA*MQLRNYDYCQSWLT
Trigger: TGTCAACCAGCTCTGGCAGTAGTCGTAGTTTCTCAGTTGCATCCATGCTTCCTGAAACAACAAGAGAAGATGTGACCAGCAATGCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp TGTGGAGTACAGGTCATGTCTGAAGATCTAGTCACAATACTTGGTTaGGACACCATTTGCTGCTCTAAGCCTCTTGATGTCAAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: CGVQVMSEDLVTILG*DTICCSKPLDVKSL
Trigger: GAGGCTTTTGACATCAAGAGGCTTAGAGCAGCAAATGGTGTCCCAACCAAGTATTGTGACTAGATCTTCAGACATGACCTGTACTCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTGTACTGGCACCACATaGGCGGTCTGCTTTTGTAAA +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNCTGTT*AVCFCK
Trigger: TTTACAAAAGCAGACCGCCAATGTGGTGCCAGTACA...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTGTACTGGCACCACATaGGCGGTCTGCTTTTGTAAA +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVCTGTT*AVCFCK
Trigger: TTTACAAAAGCAGACCGCCAATGTGGTGCCAGTACA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGAAAGAGTCCAACCATaGTCCAAAGGGTTTCCCGAA +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRERVQP*SKGFPE
Trigger: TTCGGGAAACCCTTTGGACAATGGTTGGACTCTTTC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTAGTGTTTCCTGCCAGTaGCAAAGTAGTCCACGTTGT +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVSVSCQ*QSSPRC
Trigger: ACAACGTGGACTACTTTGCAACTGGCAGGAAACACT...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACGACCCTATTACAGTATaGGCTCCATTGATGGGGAGT +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNDPITV*APLMGS
Trigger: ACTCCCCATCAATGGAGCCAATACTGTAATAGGGTC...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATGGGCAACATTGGTATTaGGATCTTCGCTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNGQHWY*DLRWWW
Trigger: CCACCACCAGCGAAGATCCAAATACCAATGTTGCCC...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACACTATTTGCAGCAGTTaGAGAATTGGCAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNTICSS*RIGRLA
Trigger: AGCCAGCCTGCCAATTCTCAAACTGCTGCAAATAGT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTTGGGGCAGTCTAACTaGCTCACATCTCTGACTGAA +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVLGQSN*LTSLTE
Trigger: TTCAGTCAGAGATGTGAGCAAGTTAGACTGCCCCAA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp CTAGAAGCTCTGTGTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACAGCTACTATATCAGTTaGCTCTACAAAGGTACAGCT +
Preference number: 5 (lower is better)
Translates to: LEALCPTRSSRFLSAWTDSYYIS*LYKGTA
Trigger: AGCTGTACCTTTGTAGAGCAAACTGATATAGTAGCT...GTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGACACAGAGCTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTTAGGTATCTGTGATTaGAAGGGTGGGTCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNLGICD*KGGSPS
Trigger: AGAGGGAGACCCACCCTTCAAATCACAGATACCTAA...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTACACTGAACTTCAGTTaGCCTCAATGCAGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVTLNFS*PQCRSH
Trigger: GTGACTCCTGCATTGAGGCAAACTGAAGTTCAGTGT...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTTGCAGAGTCCTCTGTaGGTGGACATTATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNLQSPL*VDIMGL
Trigger: CAGCCCCATAATGTCCACCAACAGAGGACTCTGCAA...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTCATCTGAACTTCCTGTaGCAGAGTCCTCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFHLNFL*QSPLLV
Trigger: CACCAACAGAGGACTCTGCAACAGGAAGTTCAGATG...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACCAGTTCCATGGTGCTTaGGTTGTAAGGAAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNQFHGA*VVRKAE
Trigger: CTCAGCTTTCCTTACAACCAAAGCACCATGGAACTG...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTGTGGCTGGCCAGTCTaGGATCGGGATTGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYCGWPV*DRDWSV
Trigger: AACTGACCAATCCCGATCCAAGACTGGCCAGCCACA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp CAAGGCATACTGGTTCCCAAAGCCAAGACTTGGGAATCACTGATTTGGGAGTATAAAGTGTTGCTGCATTaGTTGCTGCATCTGCTGATG +
Preference number: 5 (lower is better)
Translates to: QGILVPKAKTWESLIWEYKVLLH*LLHLLM
Trigger: CATCAGCAGATGCAGCAACAAATGCAGCAACACTTT...ATACTCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGAACCAGTATGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGACTCTGTGGCAGGTTGTaGACGTCCAAGAATCATACT +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRLCGRL*TSKNHT
Trigger: AGTATGATTCTTGGACGTCAACAACCTGCCACAGAG...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACCTTCTCTGTGGCAGGTaGTTGACGTCCAAGAATCAT +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNLLCGR*LTSKNH
Trigger: ATGATTCTTGGACGTCAACAACCTGCCACAGAGAAG...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGAGGGCAGAGTATTTaGCGGATCTACCGGGATGAG +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYGGQSI*RIYRDE
Trigger: CTCATCCCGGTAGATCCGCAAAATACTCTGCCCTCC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTGGAGAAGAGGAAAACTaGGTTGAGCAAACCCAACAG +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVGEEEN*VEQTQQ
Trigger: CTGTTGGGTTTGCTCAACCAAGTTTTCCTCTTCTCC...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTTATGGGCAGGTCTGTTaGAGGACTGCTTGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFYGQVC*RTAWKS
Trigger: ACTCTTCCAAGCAGTCCTCAAACAGACCTGCCCATA...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATCCCAAAGCCAAGACTaGGGAATCACTGATTTGGGA +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRSQSQD*GITDLG
Trigger: TCCCAAATCAGTGATTCCCAAGTCTTGGCTTTGGGA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS TCA 90 bp ACAATTGTACACAGCTTTGCCCAGCCATCTGTGATATGCTTTGATTaGGGCTGGCCAAAGCACCAAATGTATTCAGGGCAACATTGGTAT +
Preference number: 5 (lower is better)
Translates to: TIVHSFAQPSVICFD*GWPKHQMYSGQHWY
Trigger: ATACCAATGTTGCCCTGAATACATTTGGTGCTTTGGCCAGCCTCAATCAAAGCATATCACAGATGGCTGGGCAAAGCTGTGTACAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 90 bp ATAGACAATTGTACACAGCTTTGCCCAGCCATCTGTGATATGCTTTaGTTGAGGCTGGCCAAAGCACCAAATGTATTCAGGGCAACATTG +
Preference number: 5 (lower is better)
Translates to: IDNCTQLCPAICDML*LRLAKAPNVFRATL
Trigger: CAATGTTGCCCTGAATACATTTGGTGCTTTGGCCAGCCTCAATCAAAGCATATCACAGATGGCTGGGCAAAGCTGTGTACAATTGTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 90 bp GTCATGTGCATTGGTGGCATATCTGGGAGAAGAGGAAAACTTGGTTaGGCAAACCCAACAGGTCTGGGAGGAGATAAAATTGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: VMCIGGISGRRGKLG*ANPTGLGGDKIDPN
Trigger: ATTTGGATCAATTTTATCTCCTCCCAGACCTGTTGGGTTTGCTCAACCAAGTTTTCCTCTTCTCCCAGATATGCCACCAATGCACATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp GGCTGCATAGGTAAAGATGGACAAGAAGGCAATGTTACAACTACTTaGTCAACTGGCTGCCCATCTGCTGGAAAGGAATTATTCAAGTTG +
Preference number: 5 (lower is better)
Translates to: GCIGKDGQEGNVTTT*STGCPSAGKELFKL
Trigger: CAACTTGAATAATTCCTTTCCAGCAGATGGGCAGCCAGTTGAGCAAGTAGTTGTAACATTGCCTTCTTGTCCATCTTTACCTATGCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp AACTCTCCCCTTCTCAAGGTTCTCCTGGTCAAAAATAGCTCTTGCTaGAAGAGCTACTATATCAGTTTGCTCTACAAAGGTACAGCTGTC +
Preference number: 5 (lower is better)
Translates to: NSPLLKVLLVKNSSC*KSYYISLLYKGTAV
Trigger: GACAGCTGTACCTTTGTAGAGCAAACTGATATAGTAGCTCTTGCAGCAAGAGCTATTTTTGACCAGGAGAACCTTGAGAAGGGGAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp GATCACTTGGAGATGGAATCAATACATTGGCTGAAGCGCAGGGTTTaGCAGCATCTGATAATGCTAAACTACTTGGTGGTTTATCCTGAG +
Preference number: 5 (lower is better)
Translates to: DHLEMESIHWLKRRV*QHLIMLNYLVVYPE
Trigger: CTCAGGATAAACCACCAAGTAGTTTAGCATTATCAGATGCTGCCAAACCCTGCGCTTCAGCCAATGTATTGATTCCATCTCCAAGTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTAGTGTTTCCTGCCAGTaGCAAAGTAGTCCACGTTGT +
Preference number: 5 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTSVSCQ*QSSPRC
Trigger: ACAACGTGGACTACTTTGCAACTGGCAGGAAACACT...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGGGCAACATTGGTATTaGGATCTTCGCTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMGQHWY*DLRWWW
Trigger: CCACCACCAGCGAAGATCCAAATACCAATGTTGCCC...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACGACACGCTGACTTGTTaGCTGCTAAGTGTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNDTLTC*LLSVSC
Trigger: GCAGGAAACACTTAGCAGCAAACAAGTCAGCGTGTC...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGCTGAGCCTTCAGTGTaGGGGCAGTCTAACTTGCTC +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSAEPSV*GQSNLL
Trigger: GAGCAAGTTAGACTGCCCCAACACTGAAGGCTCAGC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTTAGGGGTAGAATCTTaGGATTTTGCTGCGGCCATT +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVLGVES*DFAAAI
Trigger: AATGGCCGCAGCAAAATCCAAAGATTCTACCCCTAA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp AGAGGCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAATAATGCTAAACTACTaGGTGGTTTATCCTGAGATG +
Preference number: 5 (lower is better)
Translates to: RGTVSGKVQEQGRGYRWKIMLNY*VVYPEM
Trigger: CATCTCAGGATAAACCACCAAGTAGTTTAGCATTAT...TTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCACAGTTTCAGGTAAAGTGCAGGAACAGGGTAGAGGCTACAGGTGGAAAGATCAAATGTGAGGATCACTaGGAGATGGAATCAATACAT +
Preference number: 5 (lower is better)
Translates to: AQFQVKCRNRVEATGGKIKCEDH*EMESIH
Trigger: ATGTATTGATTCCATCTCCAAGTGATCCTCACATTT...GATCTTTCCACCTGTAGCCTCTACCCTGTTCCTGCACTTTACCTGAAACTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCCGTTGCAGGCACAGTaGTTTGCTCTGAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSPLQAQ*FALKLG
Trigger: CCCCAACTTCAGAGCAAACAACTGTGCCTGCAACGG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATTCTGTACAGAAACATaGGGGCTTGTGTTTCGACCT +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRFCTET*GLVFRP
Trigger: AGGTCGAAACACAAGCCCCAATGTTTCTGTACAGAA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGCAACCCCATGCATGTaGGTTGTGACTGGAGGGTTC +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSATPCM*VVTGGF
Trigger: GAACCCTCCAGTCACAACCAACATGCATGGGGTTGC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS GCA 90 bp AAAGATGGACAAGAAGGCAATGTTACAACTACTTGCTCAACTGGCTaGCCATCTGCTGGAAAGGAATTATTCAAGTTGATGTCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: KDGQEGNVTTTCSTG*PSAGKELFKLMSVA
Trigger: GGCTACAGACATCAACTTGAATAATTCCTTTCCAGCAGATGGGCAGCCAGTTGAGCAAGTAGTTGTAACATTGCCTTCTTGTCCATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp ATGTCTGAAGATCTAGTCACAATACTTGGTTGGGACACCATTTGCTaGTCTAAGCCTCTTGATGTCAAAAGCCTCTGCATTGGATTATGG +
Preference number: 5 (lower is better)
Translates to: MSEDLVTILGWDTIC*SKPLDVKSLCIGLW
Trigger: CCATAATCCAATGCAGAGGCTTTTGACATCAAGAGGCTTAGAGCAGCAAATGGTGTCCCAACCAAGTATTGTGACTAGATCTTCAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGATTCCTTTCCAGTGAATaGTCGGGTCATCATATAAGC +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRFLSSE*SGHHIS
Trigger: GCTTATATGATGACCCGACAATTCACTGGAAAGGAA...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCACATATCTACTGTGGTaGCTTGTGGTGGGGCTAGTA +
Preference number: 5 (lower is better)
Translates to: VEANLFFTVTQLQHLNTITYLLW*LVVGLV
Trigger: TACTAGCCCCACCACAAGCAACCACAGTAGATATGT...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCCAATGTTACAACTACTaGCTCAACTGGCTGCCCATC +
Preference number: 5 (lower is better)
Translates to: VEANLFFTVTQLQHLNTIQCYNY*LNWLPI
Trigger: GATGGGCAGCCAGTTGAGCAAGTAGTTGTAACATTG...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTCTGAATCACTTGCATaGCTGAATTCAGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNSESLA*LNSVEG
Trigger: TCCTTCCACTGAATTCAGCAATGCAAGTGATTCAGA...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATCTGTTGACCTACTGTTaGGTTGGAAACTTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNLLTYC*VGNFCP
Trigger: AGGGCAGAAGTTTCCAACCAAACAGTAGGTCAACAG...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATACAGTATTGGCTCCATaGATGGGGAGTCGAACAGAA +
Preference number: 5 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNTVLAP*MGSRTE
Trigger: TTCTGTTCGACTCCCCATCAATGGAGCCAATACTGT...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACGTTAGCTGTAGTGGTTaGACTATTTGCAGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNVSCSG*TICSSL
Trigger: CAAACTGCTGCAAATAGTCAAACCACTACAGCTAAC...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGACACGCTGACTTGTTaGCTGCTAAGTGTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMDTLTC*LLSVSC
Trigger: GCAGGAAACACTTAGCAGCAAACAAGTCAGCGTGTC...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAGGGGACACGCTGACTaGTTTGCTGCTAAGTGTTTC +
Preference number: 5 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMRGHAD*FAAKCF
Trigger: GAAACACTTAGCAGCAAACAAGTCAGCGTGTCCCCT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTCGGCCTGTCTACCGTaGATCAAAGAACCATTAATA +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNSACLP*IKEPLI
Trigger: TATTAATGGTTCTTTGATCAACGGTAGACAGGCCGA...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACTTGGTGGCTGAGAAGTaGAATCCTGTAAAGATGCAT +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNLVAEK*NPVKMH
Trigger: ATGCATCTTTACAGGATTCAACTTCTCAGCCACCAA...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACCTGACTGACCATCATTaGAGTTTGGTCAGAAATGGT +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNLTDHH*SLVRNG
Trigger: ACCATTTCTGACCAAACTCAAATGATGGTCAGTCAG...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCCTGTAGATGCTGACTaGCCTGGGTTTGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSPVDAD*PGFAAV
Trigger: AACAGCAGCAAACCCAGGCAAGTCAGCATCTACAGG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCTGCCCTGCTTGTTGTaGTTGCTGTTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLPCLL*LLLLLL
Trigger: CAGCAGCAGCAACAGCAACAACAACAAGCAGGGCAG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTTGCAGAGTCCTCTGTaGGTGGACATTATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSLQSPL*VDIMGL
Trigger: CAGCCCCATAATGTCCACCAACAGAGGACTCTGCAA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATAGTCTTGGATCGGGATaGGTCAGTTCCATGGTGCTT +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYSLGSG*VSSMVL
Trigger: AAGCACCATGGAACTGACCAATCCCGATCCAAGACT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTTGGTGCATAATATCTaGATTGAGATGGTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVLVHNI*IEMVLG
Trigger: CCCCAGAACCATCTCAATCAAGATATTATGCACCAA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCGAATACCATTTCCTGTaGGGATGCTCTGAACTGGTG +
Preference number: 5 (lower is better)
Translates to: VEANLFFTVTQLQHLNTIEYHFL*GCSELV
Trigger: CACCAGTTCAGAGCATCCCAACAGGAAATGGTATTC...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCTTGCAGGGGATGCCTaGATCTCTGGGGAACTGAAG +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLAGDA*ISGELK
Trigger: CTTCAGTTCCCCAGAGATCAAGGCATCCCCTGCAAG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTATCAAAGACAGTACTTaGCCTTTGGTTTCCAGAACG +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVIKDST*PLVSRT
Trigger: CGTTCTGGAAACCAAAGGCAAAGTACTGTCTTTGAT...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATGGAGAAGAGGAAAACTaGGTTGAGCAAACCCAACAG +
Preference number: 5 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNGEEEN*VEQTQQ
Trigger: CTGTTGGGTTTGCTCAACCAAGTTTTCCTCTTCTCC...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTGACATTAGCCAGCACTaGATTATGAGCCACTGTGTT +
Preference number: 5 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFDISQH*IMSHCV
Trigger: AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTC...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCTGATGAAACATCCATaGTTAACTGCACCCATGCAA +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVLMKHP*LTAPMQ
Trigger: TTGCATGGGTGCAGTTAACAATGGATGTTTCATCAG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATGGAAAACTGTCCTTCTaGAAATTGGCACACTGGACC +
Preference number: 5 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNGKLSF*KLAHWT
Trigger: GGTCCAGTGTGCCAATTTCAAGAAGGACAGTTTTCC...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTCAGATGAAAAATGATTaGAAGACTTCAGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVQMKND*KTSGVG
Trigger: TCCCACCCCTGAAGTCTTCAAATCATTTTTCATCTG...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS TCA 90 bp TTCTACCTCAGAAACACAGTCAGTACTTGTAGTGCTTGTTGTAGATaGCAAACCAGGAACCTGAGAAACCAAAATGTGAGGATCACTTGG +
Preference number: 5 (lower is better)
Translates to: FYLRNTVSTCSACCR*QTRNLRNQNVRITW
Trigger: CCAAGTGATCCTCACATTTTGGTTTCTCAGGTTCCTGGTTTGTCATCTACAACAAGCACTACAAGTACTGACTGTGTTTCTGAGGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 90 bp ACAAAGTTGTTACTAGGTGGAAATAATCGTGTAAGGCCATCTCCATaGGCTGGGTTGCTAACAGGCACAACTGAGTTTGAAGAATTAGGA +
Preference number: 5 (lower is better)
Translates to: TKLLLGGNNRVRPSP*AGLLTGTTEFEELG
Trigger: TCCTAATTCTTCAAACTCAGTTGTGCCTGTTAGCAACCCAGCTCATGGAGATGGCCTTACACGATTATTTCCACCTAGTAACAACTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp ACAAGAAGGCAATGTTACAACTACTTGCTCAACTGGCTGCCCATCTaGTGGAAAGGAATTATTCAAGTTGATGTCTGTAGCCACATATCT +
Preference number: 5 (lower is better)
Translates to: TRRQCYNYLLNWLPI*WKGIIQVDVCSHIS
Trigger: AGATATGTGGCTACAGACATCAACTTGAATAATTCCTTTCCAGCAGATGGGCAGCCAGTTGAGCAAGTAGTTGTAACATTGCCTTCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp GATAGCAATGTAGTTAAACCTTGCCCCTTTAAGAGACCTGTGGTTTaGATTGTATCTGATGAATCTTGCTCAACTCTGCAAGGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: DSNVVKPCPFKRPVV*IVSDESCSTLQGSA
Trigger: TGCTGAACCTTGCAGAGTTGAGCAAGATTCATCAGATACAATGCAAACCACAGGTCTCTTAAAGGGGCAAGGTTTAACTACATTGCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp GGAAAGGAATTATTCAAGTTGATGTCTGTAGCCACATATCTACTGTaGTTGCTTGTGGTGGGGCTAGTACCAGACTCATTTAATACTGGA +
Preference number: 5 (lower is better)
Translates to: GKELFKLMSVATYLL*LLVVGLVPDSFNTG
Trigger: TCCAGTATTAAATGAGTCTGGTACTAGCCCCACCACAAGCAACCACAGTAGATATGTGGCTACAGACATCAACTTGAATAATTCCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp AGAAGGCAATGTTACAACTACTTGCTCAACTGGCTGCCCATCTGCTaGAAAGGAATTATTCAAGTTGATGTCTGTAGCCACATATCTACT +
Preference number: 5 (lower is better)
Translates to: RRQCYNYLLNWLPIC*KGIIQVDVCSHIST
Trigger: AGTAGATATGTGGCTACAGACATCAACTTGAATAATTCCTTTCCAGCAGATGGGCAGCCAGTTGAGCAAGTAGTTGTAACATTGCCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGACAGGAGTCACAAGATaGCAAGTCCTCTGTACTGGC +
Preference number: 5 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLTGVTR*QVLCTG
Trigger: GCCAGTACAGAGGACTTGCAATCTTGTGACTCCTGT...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTACAGGAGTCACAAGATaGCAAGTCCTCTGTACTGGC +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSTGVTR*QVLCTG
Trigger: GCCAGTACAGAGGACTTGCAATCTTGTGACTCCTGT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATAGAGGAACAGGCTGGTaGGTAGCCAATGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHRGTGW*VANAGT
Trigger: AGTTCCTGCATTGGCTACCAACCAGCCTGTTCCTCT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGTGGCACCAAGCACATTaGATTCGCTTTCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLWHQAH*IRFQRW
Trigger: CCACCTCTGAAAGCGAATCAAATGTGCTTGGTGCCA...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCTATTACAGTATaGGCTCCATTGATGGGGAGT +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYDPITV*APLMGS
Trigger: ACTCCCCATCAATGGAGCCAATACTGTAATAGGGTC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTGGTGGGTTGAATAATTaGCATAGGGGTTTGATTTGT +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVGGLNN*HRGLIC
Trigger: ACAAATCAAACCCCTATGCAAATTATTCAACCCACC...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCTGGCTAATAGACAATaGTACACAGCTTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMLANRQ*YTALPS
Trigger: GCTGGGCAAAGCTGTGTACAATTGTCTATTAGCCAG...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATTTGGGGCAGTCTAACTaGCTCACATCTCTGACTGAA +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYLGQSN*LTSLTE
Trigger: TTCAGTCAGAGATGTGAGCAAGTTAGACTGCCCCAA...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGCTGAAGCGCAGGGTTaGGCAGCATCTGATAATGCT +
Preference number: 5 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCAEAQG*AASDNA
Trigger: AGCATTATCAGATGCTGCCAAACCCTGCGCTTCAGC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGCTGAAGCGCAGGGTTaGGCAGCATCTGATAATGCT +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHAEAQG*AASDNA
Trigger: AGCATTATCAGATGCTGCCAAACCCTGCGCTTCAGC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGATGGAATCAATACATaGGCTGAAGCGCAGGGTTTG +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYDGINT*AEAQGL
Trigger: CAAACCCTGCGCTTCAGCCAATGTATTGATTCCATC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACAGCTACTATATCAGTTaGCTCTACAAAGGTACAGCT +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNSYYIS*LYKGTA
Trigger: AGCTGTACCTTTGTAGAGCAAACTGATATAGTAGCT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACATGCTTCAGAAGGCTTaGAAGCAACTTCCCTTATAT +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNMLQKA*KQLPLY
Trigger: ATATAAGGGAAGTTGCTTCAAAGCCTTCTGAAGCAT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTCCAACAAGGTCCTCACGCTTCTTATCAGCATGGACTGACTCAATCTAAATTTCTGACTGACCATCATTaGAGTTTGGTCAGAAATGGT +
Preference number: 5 (lower is better)
Translates to: VQQGPHASYQHGLTQSKFLTDHH*SLVRNG
Trigger: ACCATTTCTGACCAAACTCAAATGATGGTCAGTCAG...AAATTTAGATTGAGTCAGTCCATGCTGATAAGAAGCGTGAGGACCTTGTTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACGCAGGAGTCACAAAGTaGTTACTAGGTGGAAATAAT +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNAGVTK*LLGGNN
Trigger: ATTATTTCCACCTAGTAACAACTTTGTGACTCCTGC...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAGTCACAATACTTGGTaGGGACACCATTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMSHNTW*GHHLLL
Trigger: GAGCAGCAAATGGTGTCCCAACCAAGTATTGTGACT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATATTACTCTGGGGCTGTaGACTAGCTCCACTTGGTTT +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYITLGL*TSSTWF
Trigger: AAACCAAGTGGAGCTAGTCAACAGCCCCAGAGTAAT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGGAATACCATTTCCTGTaGGGATGCTCTGAACTGGTG +
Preference number: 5 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMEYHFL*GCSELV
Trigger: CACCAGTTCAGAGCATCCCAACAGGAAATGGTATTC...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGCTCTGCATGAAACTTaGGTGACAAGTATTTTCACT +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRALHET*VTSIFT
Trigger: AGTGAAAATACTTGTCACCAAAGTTTCATGCAGAGC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAGACAATTATATTCAATaGCAGAGGATGGACCACACT +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRDNYIQ*QRMDHT
Trigger: AGTGTGGTCCATCCTCTGCAATTGAATATAATTGTC...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATTTCTGTACAGAAACATaGGGGCTTGTGTTTCGACCT +
Preference number: 5 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNFCTET*GLVFRP
Trigger: AGGTCGAAACACAAGCCCCAATGTTTCTGTACAGAA...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATCTCTGTGGCAGGTTGTaGACGTCCAAGAATCATACT +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYLCGRL*TSKNHT
Trigger: AGTATGATTCTTGGACGTCAACAACCTGCCACAGAG...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS TCA 90 bp GCAGAATCCTTACGGCTTTCATGGCTTGGCTTTAAGAGTGGCTCTTaGATCTGTGAATTTGGTATGGTACTAGTCATAGTATTTAGCTGT +
Preference number: 5 (lower is better)
Translates to: AESLRLSWLGFKSGS*ICEFGMVLVIVFSC
Trigger: ACAGCTAAATACTATGACTAGTACCATACCAAATTCACAGATTCAAGAGCCACTCTTAAAGCCAAGCCATGAAAGCCGTAAGGATTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp ATCAGTTTGCTCTACAAAGGTACAGCTGTCACATGTATTAGTTGTTaGATTGCTGGTCACATCTTCTCTTGTTGTTTCAGGAAGCATGGA +
Preference number: 5 (lower is better)
Translates to: ISLLYKGTAVTCISC*IAGHIFSCCFRKHG
Trigger: TCCATGCTTCCTGAAACAACAAGAGAAGATGTGACCAGCAATGCAACAACTAATACATGTGACAGCTGTACCTTTGTAGAGCAAACTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp AAGTATTTTCACTGTCCCTTGATGGAATACCATTTCCTGTTGGGATaGTCTGAACTGGTGGGTAAGATAATCTCTTTTGACGGTCAATTG +
Preference number: 5 (lower is better)
Translates to: KYFHCPLMEYHFLLG*SELVGKIISFDGQL
Trigger: CAATTGACCGTCAAAAGAGATTATCTTACCCACCAGTTCAGAGCATCCCAACAGGAAATGGTATTCCATCAAGGGACAGTGAAAATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp TATCTGGGAGAAGAGGAAAACTTGGTTGAGCAAACCCAACAGGTCTaGGAGGAGATAAAATTGATCCAAATCGGTTATTTAAACTTCCAC +
Preference number: 5 (lower is better)
Translates to: YLGEEENLVEQTQQV*EEIKLIQIGYLNFH
Trigger: GTGGAAGTTTAAATAACCGATTTGGATCAATTTTATCTCCTCCCAGACCTGTTGGGTTTGCTCAACCAAGTTTTCCTCTTCTCCCAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAGGCTCAGATTCAATaGAAACAGCAATCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYEAQIQ*KQQSVS
Trigger: GCTCACTGATTGCTGTTTCAATTGAATCTGAGCCTC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTACATATCTACTGTGGTaGCTTGTGGTGGGGCTAGTA +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSTYLLW*LVVGLV
Trigger: TACTAGCCCCACCACAAGCAACCACAGTAGATATGT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTCAATGTTACAACTACTaGCTCAACTGGCTGCCCATC +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSQCYNY*LNWLPI
Trigger: GATGGGCAGCCAGTTGAGCAAGTAGTTGTAACATTG...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTCTGAATCACTTGCATaGCTGAATTCAGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNSESLA*LNSVEG
Trigger: TCCTTCCACTGAATTCAGCAATGCAAGTGATTCAGA...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GAAGCTGTTCTAGATGCTGACATTAGCCAGCACTTGATTATGAGCCACTGTGTTTATGATTACTATCTGTaGACCTACTGTTTGGTTGGA +
Preference number: 5 (lower is better)
Translates to: EAVLDADISQHLIMSHCVYDYYL*TYCLVG
Trigger: TCCAACCAAACAGTAGGTCAACAGATAGTAATCATA...AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTCAGCATCTAGAACAGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTATTCAGGGCAACATaGGTATTTGGATCTTCGCTG +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYVFRAT*VFGSSL
Trigger: CAGCGAAGATCCAAATACCAATGTTGCCCTGAATAC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATCAGGAGGTGCTGCAGTaGTTGTTAATGAAACACAGT +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYQEVLQ*LLMKHS
Trigger: ACTGTGTTTCATTAACAACAACTGCAGCACCTCCTG...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCAGGAGGTGCTGCAGTaGTTGTTAATGAAACACAGT +
Preference number: 5 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMQEVLQ*LLMKHS
Trigger: ACTGTGTTTCATTAACAACAACTGCAGCACCTCCTG...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATAAACACTCACACTATTaGCCTGAGACACAGAGACAG +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYKHSHY*PETQRQ
Trigger: CTGTCTCTGTGTCTCAGGCAAATAGTGTGAGTGTTT...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACCCGAATAATGCTAAACTACTaGGTGGTTTATCCTGAGATG +
Preference number: 5 (lower is better)
Translates to: APMQNSTIQLTAFTLMTRIMLNY*VVYPEM
Trigger: CATCTCAGGATAAACCACCAAGTAGTTTAGCATTAT...TCGGGTCATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TCTGACAACCCAGTATCTGCATCTGACATGGCTTCCCTACATTCAGAAGATAACAAATGTGAGGATCACTaGGAGATGGAATCAATACAT +
Preference number: 5 (lower is better)
Translates to: SDNPVSASDMASLHSEDNKCEDH*EMESIH
Trigger: ATGTATTGATTCCATCTCCAAGTGATCCTCACATTT...GTTATCTTCTGAATGTAGGGAAGCCATGTCAGATGCAGATACTGGGTTGTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp ACTGTTACCACTATAGTCAAGCCCAGTACCTCAGTGACTTCACAGATGAAAAATGACCTGTGGTTTGCATaGTATCTGATGAATCTTGCT +
Preference number: 5 (lower is better)
Translates to: TVTTIVKPSTSVTSQMKNDLWFA*YLMNLA
Trigger: AGCAAGATTCATCAGATACAATGCAAACCACAGGTC...ATTTTTCATCTGTGAAGTCACTGAGGTACTGGGCTTGACTATAGTGGTAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTGTTACCACTATGCTTCAGAAGGCTTaGAAGCAACTTCCCTTATAT +
Preference number: 5 (lower is better)
Translates to: GPFLLGRSIVQLPLTVTTMLQKA*KQLPLY
Trigger: ATATAAGGGAAGTTGCTTCAAAGCCTTCTGAAGCAT...AGTGGTAACAGTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTACGGCTTTCATGGCTaGGCTTTAAGAGTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSYGFHG*ALRVAL
Trigger: AAGAGCCACTCTTAAAGCCAAGCCATGAAAGCCGTA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATAAGGTGAGATACACCTaGAGCTGGAACATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHKVRYT*SWNMLL
Trigger: CAGCAGCATGTTCCAGCTCAAGGTGTATCTCACCTT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTAGTCACAATACTTGGTaGGGACACCATTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSSHNTW*GHHLLL
Trigger: GAGCAGCAAATGGTGTCCCAACCAAGTATTGTGACT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGACAGTACTTTGCCTTaGGTTTCCAGAACGATTCCT +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYDSTLP*VSRTIP
Trigger: AGGAATCGTTCTGGAAACCAAAGGCAAAGTACTGTC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTAGTTGGTCATGTGCATaGGTGGCATATCTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSSWSCA*VAYLGE
Trigger: TTCTCCCAGATATGCCACCAATGCACATGACCAACT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCCTGATGAAACATCCATaGTTAACTGCACCCATGCAA +
Preference number: 5 (lower is better)
Translates to: VEANLFFTVTQLQHLNTILMKHP*LTAPMQ
Trigger: TTGCATGGGTGCAGTTAACAATGGATGTTTCATCAG...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp AACACTATCTGGTCCCTTTCTTCTTGGAAGATCAATAGTTCAACTCCCCTTAACTACGAAGCAAGACCATaGAGGAATTCCTACACCTTA +
Preference number: 5 (lower is better)
Translates to: NTIWSLSSWKINSSTPLNYEARP*RNSYTL
Trigger: TAAGGTGTAGGAATTCCTCAATGGTCTTGCTTCGTA...GTTAAGGGGAGTTGAACTATTGATCTTCCAAGAAGAAAGGGACCAGATAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCAAACATCAGCTGTACTaGTCGAGAAGGTGTCTGATT +
Preference number: 5 (lower is better)
Translates to: VEANLFFTVTQLQHLNTIKHQLY*SRRCLI
Trigger: AATCAGACACCTTCTCGACAAGTACAGCTGATGTTT...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS TCA 90 bp ATCACAGGCTGCAAAGCAAAGAGCTGTCCATTTAAAGAAATGGTTTaGGGCTGTTGGTTTGACATGGTAACAGAAAAAGTTTGTGTTGAG +
Preference number: 5 (lower is better)
Translates to: ITGCKAKSCPFKEMV*GCWFDMVTEKVCVE
Trigger: CTCAACACAAACTTTTTCTGTTACCATGTCAAACCAACAGCCTCAAACCATTTCTTTAAATGGACAGCTCTTTGCTTTGCAGCCTGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp TGGACAAGATGCTTTCCTCCAAAAGTCTGTGGTGTTGGAACATTTTaGACTGAATTATTAGACCCTATTACAGTATTGGCTCCATTGATG +
Preference number: 5 (lower is better)
Translates to: WTRCFPPKVCGVGTF*TELLDPITVLAPLM
Trigger: CATCAATGGAGCCAATACTGTAATAGGGTCTAATAATTCAGTGCAAAATGTTCCAACACCACAGACTTTTGGAGGAAAGCATCTTGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp TTAGACGCTGATAAAGATGAAGGTCTTGGTAATATGTGGACAAGATaGTTTCCTCCAAAAGTCTGTGGTGTTGGAACATTTTGCACTGAA +
Preference number: 5 (lower is better)
Translates to: LDADKDEGLGNMWTR*FPPKVCGVGTFCTE
Trigger: TTCAGTGCAAAATGTTCCAACACCACAGACTTTTGGAGGAAAGCATCTTGTCCACATATTACCAAGACCTTCATCTTTATCAGCGTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 90 bp TCCTGGTCAAAAATAGCTCTTGCTGCAAGAGCTACTATATCAGTTTaGTCTACAAAGGTACAGCTGTCACATGTATTAGTTGTTGCATTG +
Preference number: 5 (lower is better)
Translates to: SWSKIALAARATISV*STKVQLSHVLVVAL
Trigger: CAATGCAACAACTAATACATGTGACAGCTGTACCTTTGTAGAGCAAACTGATATAGTAGCTCTTGCAGCAAGAGCTATTTTTGACCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 90 bp TGTGTTGAGTTAGACGCTGATAAAGATGAAGGTCTTGGTAATATGTaGACAAGATGCTTTCCTCCAAAAGTCTGTGGTGTTGGAACATTT +
Preference number: 5 (lower is better)
Translates to: CVELDADKDEGLGNM*TRCFPPKVCGVGTF
Trigger: AAATGTTCCAACACCACAGACTTTTGGAGGAAAGCATCTTGTCCACATATTACCAAGACCTTCATCTTTATCAGCGTCTAACTCAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGAGAGTTTCTTCACTTTaGATTCCTGGCTTCCAATGC +
Preference number: 5 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLRVSSL*IPGFQC
Trigger: GCATTGGAAGCCAGGAATCAAAAGTGAAGAAACTCT...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CAA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGGAAAGAGTCCAACCATaGTCCAAAGGGTTTCCCGAA +
Preference number: 5 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIEERVQP*SKGFPE
Trigger: TTCGGGAAACCCTTTGGACAATGGTTGGACTCTTTC...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCTGTTGACCTACTGTTaGGTTGGAAACTTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLLTYC*VGNFCP
Trigger: AGGGCAGAAGTTTCCAACCAAACAGTAGGTCAACAG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATACAGTATTGGCTCCATaGATGGGGAGTCGAACAGAA +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHTVLAP*MGSRTE
Trigger: TTCTGTTCGACTCCCCATCAATGGAGCCAATACTGT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCGGTGGGTTGAATAATTaGCATAGGGGTTTGATTTGT +
Preference number: 5 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVGGLNN*HRGLIC
Trigger: ACAAATCAAACCCCTATGCAAATTATTCAACCCACC...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGACTATTTGCAGCAGTTaGAGAATTGGCAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIETICSS*RIGRLA
Trigger: AGCCAGCCTGCCAATTCTCAAACTGCTGCAAATAGT...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCGTATTAGTTGTTGCATaGCTGGTCACATCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVVLVVA*LVTSSL
Trigger: AAGAGAAGATGTGACCAGCAATGCAACAACTAATAC...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTTAGGTATCTGTGATTaGAAGGGTGGGTCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLGICD*KGGSPS
Trigger: AGAGGGAGACCCACCCTTCAAATCACAGATACCTAA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTTCCTAGAGAACAACTaGGTTTCTCAAGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHFLENN*VSQGAS
Trigger: AGAGGCCCCTTGAGAAACCAAGTTGTTCTCTAGGAA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCGCAGGAGTCACAAAGTaGTTACTAGGTGGAAATAAT +
Preference number: 5 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVAGVTK*LLGGNN
Trigger: ATTATTTCCACCTAGTAACAACTTTGTGACTCCTGC...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTAAAGTGTTGCTGCATTaGTTGCTGCATCTGCTGATG +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSKVLLH*LLHLLM
Trigger: CATCAGCAGATGCAGCAACAAATGCAGCAACACTTT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATCTCTGGAACCCTGAATaGATATCCCCATTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHLWNPE*ISPFSA
Trigger: AGCAGAGAATGGGGATATCAATTCAGGGTTCCAGAG...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATTACTCTGGGGCTGTaGACTAGCTCCACTTGGTTT +
Preference number: 5 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCITLGL*TSSTWF
Trigger: AAACCAAGTGGAGCTAGTCAACAGCCCCAGAGTAAT...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCGACAATTATATTCAATaGCAGAGGATGGACCACACT +
Preference number: 5 (lower is better)
Translates to: VEANLFFTVTQLQHLNTIDNYIQ*QRMDHT
Trigger: AGTGTGGTCCATCCTCTGCAATTGAATATAATTGTC...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGCAGAAACATTGGGGCTaGTGTTTCGACCTTGAATAT +
Preference number: 5 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMQKHWG*CFDLEY
Trigger: ATATTCAAGGTCGAAACACAAGCCCCAATGTTTCTG...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATAGTTGGTCATGTGCATaGGTGGCATATCTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHSWSCA*VAYLGE
Trigger: TTCTCCCAGATATGCCACCAATGCACATGACCAACT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGACATTAGCCAGCACTaGATTATGAGCCACTGTGTT +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSDISQH*IMSHCV
Trigger: AACACAGTGGCTCATAATCAAGTGCTGGCTAATGTC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCACCCCATCCCATTTTaGGCAGAATATAACAAGAAC +
Preference number: 5 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLHPIPF*AEYNKN
Trigger: GTTCTTGTTATATTCTGCCAAAAATGGGATGGGGTG...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCAAGAGACAGGACAGTTaGGTAAGAACAGTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: VEANLFFTVTQLQHLNTIKRQDS*VRTVKE
Trigger: CTCTTTAACTGTTCTTACCAAACTGTCCTGTCTCTT...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGAAACATCAGCTGTACTaGTCGAGAAGGTGTCTGATT +
Preference number: 5 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLKHQLY*SRRCLI
Trigger: AATCAGACACCTTCTCGACAAGTACAGCTGATGTTT...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CAA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGTGTTTACAACCCAAGTaGGCTCACGTTTATGAAGCA +
Preference number: 5 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLCLQPK*AHVYEA
Trigger: TGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACA...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS TCA 90 bp GGTTTGGCAGCATCTGATAATGCTAAACTACTTGGTGGTTTATCCTaGGATGTCTCTTGTTGTAGATTAGGGGTAGAATCTTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: GLAASDNAKLLGGLS*DVSCCRLGVESLDF
Trigger: AAAATCCAAAGATTCTACCCCTAATCTACAACAAGAGACATCTCAGGATAAACCACCAAGTAGTTTAGCATTATCAGATGCTGCCAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGAGGCTCAGATTCAATaGAAACAGCAATCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCEAQIQ*KQQSVS
Trigger: GCTCACTGATTGCTGTTTCAATTGAATCTGAGCCTC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGTATTCAGGGCAACATaGGTATTTGGATCTTCGCTG +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHVFRAT*VFGSSL
Trigger: CAGCGAAGATCCAAATACCAATGTTGCCCTGAATAC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCAAACACTCACACTATTaGCCTGAGACACAGAGACAG +
Preference number: 5 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCKHSHY*PETQRQ
Trigger: CTGTCTCTGTGTCTCAGGCAAATAGTGTGAGTGTTT...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCTTAGGGGTAGAATCTTaGGATTTTGCTGCGGCCATT +
Preference number: 5 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCLGVES*DFAAAI
Trigger: AATGGCCGCAGCAAAATCCAAAGATTCTACCCCTAA...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGACCTGTGGTTTGCATaGTATCTGATGAATCTTGCT +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSDLWFA*YLMNLA
Trigger: AGCAAGATTCATCAGATACAATGCAAACCACAGGTC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GTTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGTATTAGTTGTTGCATaGCTGGTCACATCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: VNCTHAKLHNTTNCFYPYVLVVA*LVTSSL
Trigger: AAGAGAAGATGTGACCAGCAATGCAACAACTAATAC...ATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTTGGTGCATAATATCTaGATTGAGATGGTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSLVHNI*IEMVLG
Trigger: CCCCAGAACCATCTCAATCAAGATATTATGCACCAA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCGACAGTACTTTGCCTTaGGTTTCCAGAACGATTCCT +
Preference number: 5 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCDSTLP*VSRTIP
Trigger: AGGAATCGTTCTGGAAACCAAAGGCAAAGTACTGTC...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp CAAACTGAGCTTCTCCTTAGCCTGTTACCTTACTTTCAATTATGTCTAGCAGTCGTCCTTGAGTTCACTTaGTTAACAAGGCAGATAAAA +
Preference number: 5 (lower is better)
Translates to: QTELLLSLLPYFQLCLAVVLEFT*LTRQIK
Trigger: TTTTATCTGCCTTGTTAACAAAGTGAACTCAAGGAC...GACTGCTAGACATAATTGAAAGTAAGGTAACAGGCTAAGGAGAAGCTCAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGCAGCATCTTAACACTATCCTAGAAATAAGGATGTaGAATGACCACCACATACAA +
Preference number: 5 (lower is better)
Translates to: VEANLFFTVTQLQHLNTILEIRM*NDHHIQ
Trigger: TTGTATGTGGTGGTCATTCAACATCCTTATTTCTAG...GATAGTGTTAAGATGCTGCAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGTGCAAAGAATGATGTaGGTGAGGCTCAGATTCAAT +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHVQRMM*VRLRFN
Trigger: ATTGAATCTGAGCCTCACCAACATCATTCTTTGCAC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTATATAGCCTGCTGAAAGTGGAAGCGAATCTTTTCTTCACAGTAACACAACTGTACTTTGGGGTTCTCTaGTCCATTCTTATTTTCAGA +
Preference number: 5 (lower is better)
Translates to: LYSLLKVEANLFFTVTQLYFGVL*SILIFR
Trigger: TCTGAAAATAAGAATGGACAAGAGAACCCCAAAGTA...CAGTTGTGTTACTGTGAAGAAAAGATTCGCTTCCACTTTCAGCAGGCTATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTATTTTGCTGCGGCCATaGCAAAATGTTCACTTGTTA +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSILLRP*QNVHLL
Trigger: TAACAAGTGAACATTTTGCAATGGCCGCAGCAAAAT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp CCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATTCGGCCTGTCTACCGTaGATCAAAGAACCATTAATA +
Preference number: 5 (lower is better)
Translates to: PNFKQEDGSEYSHPNTMHSACLP*IKEPLI
Trigger: TATTAATGGTTCTTTGATCAACGGTAGACAGGCCGA...ATGCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCTTGGTGGCTGAGAAGTaGAATCCTGTAAAGATGCAT +
Preference number: 5 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCLVAEK*NPVKMH
Trigger: ATGCATCTTTACAGGATTCAACTTCTCAGCCACCAA...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTTCCAACATCCTGCTGTaGGTGCATAATATCTTGATT +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSSNILL*VHNILI
Trigger: AATCAAGATATTATGCACCAACAGCAGGATGTTGGA...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTGCTCTGCATGAAACTTaGGTGACAAGTATTTTCACT +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSALHET*VTSIFT
Trigger: AGTGAAAATACTTGTCACCAAAGTTTCATGCAGAGC...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCATCAAAGACAGTACTTaGCCTTTGGTTTCCAGAACG +
Preference number: 5 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCIKDST*PLVSRT
Trigger: CGTTCTGGAAACCAAAGGCAAAGTACTGTCTTTGAT...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTATTATCATTAGGTACTaGTGGGCTATCAGGCATGAA +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSIIIRY*WAIRHE
Trigger: TTCATGCCTGATAGCCCACAAGTACCTAATGATAAT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTAACTGCACCCATGCAAAACTCCACAATACAACTAACTGCTTTTACCCTTATGAAGTACACCATGCAGTaGAAAACGAAAGATAACTTG +
Preference number: 5 (lower is better)
Translates to: LTAPMQNSTIQLTAFTLMKYTMQ*KTKDNL
Trigger: CAAGTTATCTTTCGTTTTCAACTGCATGGTGTACTT...CATAAGGGTAAAAGCAGTTAGTTGTATTGTGGAGTTTTGCATGGGTGCAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GCTAACTGCTTGACTTTAACTACGGACATTAAACTCAACATCAGTTCAACATCTATTTTGGTATCACCTTaGCCCTTTCATTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: ANCLTLTTDIKLNISSTSILVSP*PFHSSQ
Trigger: CTGTGAAGAATGAAAGGGCAAAGGTGATACCAAAAT...AGATGTTGAACTGATGTTGAGTTTAATGTCCGTAGTTAAAGTCAAGCAGTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGCAAAGCTGTTTCATTTaGGTATCACCTTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLQSCFI*VSPLPF
Trigger: AAAGGGCAAAGGTGATACCAAAATGAAACAGCTTTG...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATATTTTGCTGCGGCCATaGCAAAATGTTCACTTGTTA +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHILLRP*QNVHLL
Trigger: TAACAAGTGAACATTTTGCAATGGCCGCAGCAAAAT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGGGATCTCTATCATCATaGTTCATCAGTAATAGTTCC +
Preference number: 5 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLGSLSS*FISNSS
Trigger: GGAACTATTACTGATGAACAATGATGATAGAGATCC...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCTATTTTCACTGTCCCTaGATGGAATACCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCYFHCP*MEYHFL
Trigger: CAGGAAATGGTATTCCATCAAGGGACAGTGAAAATA...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTATTTTCACTGTCCCTaGATGGAATACCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHYFHCP*MEYHFL
Trigger: CAGGAAATGGTATTCCATCAAGGGACAGTGAAAATA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATATTATCATTAGGTACTaGTGGGCTATCAGGCATGAA +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHIIIRY*WAIRHE
Trigger: TTCATGCCTGATAGCCCACAAGTACCTAATGATAAT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TATATTATGTCCAATGTTTACAACCCAAGTTGGCTCACGTTTATGAAGCATCTGGTTCTAGTAGAAACCTaGTTCATTGTTTCCTCCATT +
Preference number: 5 (lower is better)
Translates to: YIMSNVYNPSWLTFMKHLVLVET*FIVSSI
Trigger: AATGGAGGAAACAATGAACAAGGTTTCTACTAGAAC...CAGATGCTTCATAAACGTGAGCCAACTTGGGTTGTAAACATTGGACATAATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491165.5
CDS TCA 90 bp GGAATAACAACAGAGACCTTTGAGTTTTTAAGATTTCCTTTCCAGTaGATTGTCGGGTCATCATATAAGCATATGTCATTAGCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: GITTETFEFLRFPFQ*IVGSSYKHMSLAFS
Trigger: ACTGAAAGCTAATGACATATGCTTATATGATGACCCGACAATTCACTGGAAAGGAAATCTTAAAAACTCAAAGGTCTCTGTTGTTATTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATTACTTTGGGGTTCTCTaGTCCATTCTTATTTTCAGA +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHYFGVL*SILIFR
Trigger: TCTGAAAATAAGAATGGACAAGAGAACCCCAAAGTA...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp ATTATTCACAGATGGTCACATTTTTCCTCAGATGGTCAAATAAGGCTTATTGAGTATGATTACTATCTGTaGACCTACTGTTTGGTTGGA +
Preference number: 5 (lower is better)
Translates to: IIHRWSHFSSDGQIRLIEYDYYL*TYCLVG
Trigger: TCCAACCAAACAGTAGGTCAACAGATAGTAATCATA...CTCAATAAGCCTTATTTGACCATCTGAGGAAAAATGTGACCATCTGTGAATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316407.9
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATGGATCTCTATCATCATaGTTCATCAGTAATAGTTCC +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHGSLSS*FISNSS
Trigger: GGAACTATTACTGATGAACAATGATGATAGAGATCC...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp GAGAATACTAAATTAAACTCAGCTGATGAAACATCCATTGTTAACTGCACCCATAAGTACACCATGCAGTaGAAAACGAAAGATAACTTG +
Preference number: 5 (lower is better)
Translates to: ENTKLNSADETSIVNCTHKYTMQ*KTKDNL
Trigger: CAAGTTATCTTTCGTTTTCAACTGCATGGTGTACTT...ATGGGTGCAGTTAACAATGGATGTTTCATCAGCTGAGTTTAATTTAGTATTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000478658.1
CDS-3UTR CAA 90 bp TTCCAAACTTTAAACAAGAGGATGGTTCAGAATATTCACACCCTAATACAATGCCTAGAAATAAGGATGTaGAATGACCACCACATACAA +
Preference number: 5 (lower is better)
Translates to: FQTLNKRMVQNIHTLIQCLEIRM*NDHHIQ
Trigger: TTGTATGTGGTGGTCATTCAACATCCTTATTTCTAG...GCATTGTATTAGGGTGTGAATATTCTGAACCATCCTCTTGTTTAAAGTTTGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS CCA 72 bp GATCCCAGGAGGGGAAGGCAGGAGTGTCTGACCGTCTaGGCGAATCTCTCCGTCCGCGGCCACCGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: DPRRGRQECLTV*ANLSVRGHRLL
Trigger: GAGCAGGCGGTGGCCGCGGACGGAGAGATTCGCCCAGACGGTCAGACACTCCTGCCTTCCCCTCCTGGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS CCA 72 bp CGCTGGCCTTGCAACCCCATGCATGTTGGTTGTGACTaGAGGGTTCATGTGGCCCTTGGTGGCATGACTCTC +
Preference number: 6 (lower is better)
Translates to: RWPCNPMHVGCD*RVHVALGGMTL
Trigger: GAGAGTCATGCCACCAAGGGCCACATGAACCCTCCAGTCACAACCAACATGCATGGGGTTGCAAGGCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp GGATGTGGCAACGCTGGCCTTGCAACCCCATGCATGTaGGTTGTGACTGGAGGGTTCATGTGGCCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: GCGNAGLATPCM*VVTGGFMWPLV
Trigger: CACCAAGGGCCACATGAACCCTCCAGTCACAACCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp CTCTCTCTTAACTGCCCTGCTTGTTGTTGTTGCTGTTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LSLNCPACCCCC*CCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAACAACAAGCAGGGCAGTTAAGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp GGGCAGAGTATTTTGCGGATCTACCGGGATGAGGGCTaGAGTTCGAGTGGCACTAGGCTGAGTAACCTGTGG +
Preference number: 6 (lower is better)
Translates to: GQSILRIYRDEG*SSSGTRLSNLW
Trigger: CCACAGGTTACTCAGCCTAGTGCCACTCGAACTCCAGCCCTCATCCCGGTAGATCCGCAAAATACTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp AGCAGGGCCTTGATCGCCATTTCCATGAGACACAGATaGATGTGGCAACGCTGGCCTTGCAACCCCATGCAT +
Preference number: 6 (lower is better)
Translates to: SRALIAISMRHR*MWQRWPCNPMH
Trigger: ATGCATGGGGTTGCAAGGCCAGCGTTGCCACATCCATCTGTGTCTCATGGAAATGGCGATCAAGGCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp CTGGAACATGCTGCTGCAGGGCCTGTAGATGCTGACTaGCCTGGGTTTGCTGCTGTTCAGCAACTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: LEHAAAGPVDAD*PGFAAVQQLKA
Trigger: AGCCTTCAGTTGCTGAACAGCAGCAAACCCAGGCAAGTCAGCATCTACAGGCCCTGCAGCAGCATGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp AGGATGAGCAGGAGAGTATGGAGGATAGAAGGAGGGCAGAGTATTTaGCGGATCTACCGGGATGAGGGCTGGAGTTCGAGTGGCACTAGG +
Preference number: 6 (lower is better)
Translates to: RMSRRVWRIEGGQSI*RIYRDEGWSSSGTR
Trigger: CCTAGTGCCACTCGAACTCCAGCCCTCATCCCGGTAGATCCGCAAAATACTCTGCCCTCCTTCTATCCTCCATACTCTCCTGCTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp TCCATGAGACACAGATGGATGTGGCAACGCTGGCCTTaGAACCCCATGCATGTTGGTTGTGACTGGAGGGTT +
Preference number: 6 (lower is better)
Translates to: SMRHRWMWQRWP*NPMHVGCDWRV
Trigger: AACCCTCCAGTCACAACCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCACATCCATCTGTGTCTCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp TGGTGGGGATGTGGCTGGCCAGTCTTGGATCGGGATTaGTCAGTTCCATGGTGCTTTGGTTGTAAGGAAAGC +
Preference number: 6 (lower is better)
Translates to: WWGCGWPVLDRD*SVPWCFGCKES
Trigger: GCTTTCCTTACAACCAAAGCACCATGGAACTGACCAATCCCGATCCAAGACTGGCCAGCCACATCCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp GCCATTTCCATGAGACACAGATGGATGTGGCAACGCTaGCCTTGCAACCCCATGCATGTTGGTTGTGACTGG +
Preference number: 6 (lower is better)
Translates to: AISMRHRWMWQR*PCNPMHVGCDW
Trigger: CCAGTCACAACCAACATGCATGGGGTTGCAAGGCCAGCGTTGCCACATCCATCTGTGTCTCATGGAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp GGCTCTGCTGAGCCTTCAGTGTTGGGGCAGTCTAACTaGCTCACATCTCTGACTGAATTCAGGGGACACGCT +
Preference number: 6 (lower is better)
Translates to: GSAEPSVLGQSN*LTSLTEFRGHA
Trigger: AGCGTGTCCCCTGAATTCAGTCAGAGATGTGAGCAAGTTAGACTGCCCCAACACTGAAGGCTCAGCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp GTGGCTGGCCAGTCTTGGATCGGGATTGGTCAGTTCCATGGTGCTTaGGTTGTAAGGAAAGCTGAGAGGTCTGGGTGCCCTGAACAAGAT +
Preference number: 6 (lower is better)
Translates to: VAGQSWIGIGQFHGA*VVRKAERSGCPEQD
Trigger: ATCTTGTTCAGGGCACCCAGACCTCTCAGCTTTCCTTACAACCAAAGCACCATGGAACTGACCAATCCCGATCCAAGACTGGCCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp GAAACGGTCAGATTAACCGTTGCAGGCACAGTTGTTTaGTCTGAAGTTGGGGATAAACCCGCACAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: ETVRLTVAGTVV*SEVGDKPAQLA
Trigger: GGCCAGCTGTGCGGGTTTATCCCCAACTTCAGAGCAAACAACTGTGCCTGCAACGGTTAATCTGACCGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp CAGTCTTGGATCGGGATTGGTCAGTTCCATGGTGCTTaGGTTGTAAGGAAAGCTGAGAGGTCTGGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: QSWIGIGQFHGA*VVRKAERSGCP
Trigger: AGGGCACCCAGACCTCTCAGCTTTCCTTACAACCAAAGCACCATGGAACTGACCAATCCCGATCCAAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp TTACAGGGTGGCTCTGCTGAGCCTTCAGTGTTGGGGCAGTCTAACTaGCTCACATCTCTGACTGAATTCAGGGGACACGCTGACTTGTTT +
Preference number: 6 (lower is better)
Translates to: LQGGSAEPSVLGQSN*LTSLTEFRGHADLF
Trigger: AAACAAGTCAGCGTGTCCCCTGAATTCAGTCAGAGATGTGAGCAAGTTAGACTGCCCCAACACTGAAGGCTCAGCAGAGCCACCCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp TCTAGCAGTCCATCATTACAGGGTGGCTCTGCTGAGCCTTCAGTGTaGGGGCAGTCTAACTTGCTCACATCTCTGACTGAATTCAGGGGA +
Preference number: 6 (lower is better)
Translates to: SSSPSLQGGSAEPSV*GQSNLLTSLTEFRG
Trigger: TCCCCTGAATTCAGTCAGAGATGTGAGCAAGTTAGACTGCCCCAACACTGAAGGCTCAGCAGAGCCACCCTGTAATGATGGACTGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp TGCACTCTTACTAATGCTCATTGGAGAAGAATCACCTaGAGTTCTGGGAGGCTGCGAGCAGACTGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: CTLTNAHWRRIT*SSGRLRADCGG
Trigger: ACCACCACAGTCTGCTCGCAGCCTCCCAGAACTGCAGGTGATTCTTCTCCAATGAGCATTAGTAAGAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp GAGTCGAACAGAACCAGGAGGTGGAGCAGGGAGGAGTaGCAAAGGATTCTGATTAGCAGCCTGTATGATTAC +
Preference number: 6 (lower is better)
Translates to: ESNRTRRWSREE*QRILISSLYDY
Trigger: GTAATCATACAGGCTGCTAATCAGAATCCTTTGCCACTCCTCCCTGCTCCACCTCCTGGTTCTGTTCGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp GGAGTCACAGCAGAAGATGGTGTCTGGCTTAAGGGCTaGATAGTGTTTCCTGCCAGTTGCAAAGTAGTCCAC +
Preference number: 6 (lower is better)
Translates to: GVTAEDGVWLKG*IVFPASCKVVH
Trigger: GTGGACTACTTTGCAACTGGCAGGAAACACTATTCAGCCCTTAAGCCAGACACCATCTTCTGCTGTGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp CTTCAGTGTTGGGGCAGTCTAACTTGCTCACATCTCTaGCTGAATTCAGGGGACACGCTGACTTGTTTGCTG +
Preference number: 6 (lower is better)
Translates to: LQCWGSLTCSHL*LNSGDTLTCLL
Trigger: CAGCAAACAAGTCAGCGTGTCCCCTGAATTCAGTCAGAGATGTGAGCAAGTTAGACTGCCCCAACACTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp AGATGGTCCAGGAGGTTGACTGCCATAGGAGCTAGATaGAACGGTCAGATTAACCGTTGCAGGCACAGTTGT +
Preference number: 6 (lower is better)
Translates to: RWSRRLTAIGAR*NGQINRCRHSC
Trigger: ACAACTGTGCCTGCAACGGTTAATCTGACCGTTTCATCTAGCTCCTATGGCAGTCAACCTCCTGGACCATCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp TCAATTGCAGAGGATGGACCACACTGTGTATTCCTCTaGTGTTCTGAGAGTGACCTCTGGCTCCCAATGACC +
Preference number: 6 (lower is better)
Translates to: SIAEDGPHCVFL*CSESDLWLPMT
Trigger: GGTCATTGGGAGCCAGAGGTCACTCTCAGAACATCAGAGGAATACACAGTGTGGTCCATCCTCTGCAATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp GTTGTGACTGGAGGGTTCATGTGGCCCTTGGTGGCATaGCTCTCAGTAATCCTCATGGGATTGGATTTCTGT +
Preference number: 6 (lower is better)
Translates to: VVTGGFMWPLVA*LSVILMGLDFC
Trigger: ACAGAAATCCAATCCCATGAGGATTACTGAGAGTCATGCCACCAAGGGCCACATGAACCCTCCAGTCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp ACCGGGATGAGGGCTGGAGTTCGAGTGGCACTAGGCTaGGTAACCTGTGGAATGAAAGAAGCATTAGCATTT +
Preference number: 6 (lower is better)
Translates to: TGMRAGVRVALG*VTCGMKEALAF
Trigger: AAATGCTAATGCTTCTTTCATTCCACAGGTTACTCAGCCTAGTGCCACTCGAACTCCAGCCCTCATCCCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp TACTATCTGTTGACCTACTGTTTGGTTGGAAACTTCTaGCCTCATCACTGTTGGGCATGGGGTGGTGCTAGG +
Preference number: 6 (lower is better)
Translates to: YYLLTYCLVGNF*PHHCWAWGGAR
Trigger: CCTAGCACCACCCCATGCCCAACAGTGATGAGGGCAGAAGTTTCCAACCAAACAGTAGGTCAACAGATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp GGTTTCCAGAACGATTCCTTTCAGGCTGACGAATTTTaGAACCACTGCTGTCTTGCAGGGGATGCCTTGATC +
Preference number: 6 (lower is better)
Translates to: GFQNDSFQADEF*NHCCLAGDALI
Trigger: GATCAAGGCATCCCCTGCAAGACAGCAGTGGTTCCAAAATTCGTCAGCCTGAAAGGAATCGTTCTGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp TTTCTGCATCTGAACTTCCTGTTGCAGAGTCCTCTGTaGGTGGACATTATGGGGCTGAGAGTGGACAGAGCT +
Preference number: 6 (lower is better)
Translates to: FLHLNFLLQSPL*VDIMGLRVDRA
Trigger: AGCTCTGTCCACTCTCAGCCCCATAATGTCCACCAACAGAGGACTCTGCAACAGGAAGTTCAGATGCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp CACAGCTTTGCCCAGCCATCTGTGATATGCTTTGATTaGGGCTGGCCAAAGCACCAAATGTATTCAGGGCAA +
Preference number: 6 (lower is better)
Translates to: HSFAQPSVICFD*GWPKHQMYSGQ
Trigger: TTGCCCTGAATACATTTGGTGCTTTGGCCAGCCTCAATCAAAGCATATCACAGATGGCTGGGCAAAGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp ATGGTTCTGGGGATGGTTATGATGGTTCCGACTAGTTaGAGGGTTTTCACAGCTCTTCTCTGTCTGGGAGCT +
Preference number: 6 (lower is better)
Translates to: MVLGMVMMVPTS*RVFTALLCLGA
Trigger: AGCTCCCAGACAGAGAAGAGCTGTGAAAACCCTTCAACTAGTCGGAACCATCATAACCATCCCCAGAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp CTTTGCCTTTGGTTTCCAGAACGATTCCTTTCAGGCTaGCGAATTTTGGAACCACTGCTGTCTTGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: LCLWFPERFLSG*RILEPLLSCRG
Trigger: TCCCCTGCAAGACAGCAGTGGTTCCAAAATTCGTCAGCCTGAAAGGAATCGTTCTGGAAACCAAAGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp CTCATTGGAGAAGAATCACCTGCAGTTCTGGGAGGCTaGGAGCAGACTGTGGTGGTAACTGAAACAACAAAA +
Preference number: 6 (lower is better)
Translates to: LIGEESPAVLGG*EQTVVVTETTK
Trigger: TTTTGTTGTTTCAGTTACCACCACAGTCTGCTCGCAGCCTCCCAGAACTGCAGGTGATTCTTCTCCAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp TGGCCAGATACATGTTCAGATGAAACCCCTGAACCTTaGTGTCTGCTTCCAACATCCTGCTGTTGGTGCATA +
Preference number: 6 (lower is better)
Translates to: WPDTCSDETPEP*CLLPTSCCWCI
Trigger: TATGCACCAACAGCAGGATGTTGGAAGCAGACAGCAAGGTTCAGGGGTTTCATCTGAACATGTATCTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp TACTGTTTGGTTGGAAACTTCTGCCCTCATCACTGTTaGGCATGGGGTGGTGCTAGGTGGCTGAAGAATTAT +
Preference number: 6 (lower is better)
Translates to: YCLVGNFCPHHC*AWGGARWLKNY
Trigger: ATAATTCTTCAGCCACCTAGCACCACCCCATGCCCAACAGTGATGAGGGCAGAAGTTTCCAACCAAACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp GCCTGTCCTGTGCCACTCTCTTTAGGTATCTGTGATTaGAAGGGTGGGTCTCCCTCTAACAATGATGCTTCA +
Preference number: 6 (lower is better)
Translates to: ACPVPLSLGICD*KGGSPSNNDAS
Trigger: TGAAGCATCATTGTTAGAGGGAGACCCACCCTTCAAATCACAGATACCTAAAGAGAGTGGCACAGGACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp TGTGCATTGGTGGCATATCTGGGAGAAGAGGAAAACTaGGTTGAGCAAACCCAACAGGTCTGGGAGGAGATA +
Preference number: 6 (lower is better)
Translates to: CALVAYLGEEEN*VEQTQQVWEEI
Trigger: TATCTCCTCCCAGACCTGTTGGGTTTGCTCAACCAAGTTTTCCTCTTCTCCCAGATATGCCACCAATGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp ACTTGCTCAACTGGCTGCCCATCTGCTGGAAAGGAATTATTCAAGTaGATGTCTGTAGCCACATATCTACTGTGGTTGCTTGTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: TCSTGCPSAGKELFK*MSVATYLLWLLVVG
Trigger: CCCCACCACAAGCAACCACAGTAGATATGTGGCTACAGACATCAACTTGAATAATTCCTTTCCAGCAGATGGGCAGCCAGTTGAGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp GTTGCTTCTGCCTGTCCTGTGCCACTCTCTTTAGGTATCTGTGATTaGAAGGGTGGGTCTCCCTCTAACAATGATGCTTCAGAAGGCTTT +
Preference number: 6 (lower is better)
Translates to: VASACPVPLSLGICD*KGGSPSNNDASEGF
Trigger: AAAGCCTTCTGAAGCATCATTGTTAGAGGGAGACCCACCCTTCAAATCACAGATACCTAAAGAGAGTGGCACAGGACAGGCAGAAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp ACATTTTGCACTGAATTATTAGACCCTATTACAGTATTGGCTCCATaGATGGGGAGTCGAACAGAACCAGGAGGTGGAGCAGGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: TFCTELLDPITVLAP*MGSRTEPGGGAGRS
Trigger: ACTCCTCCCTGCTCCACCTCCTGGTTCTGTTCGACTCCCCATCAATGGAGCCAATACTGTAATAGGGTCTAATAATTCAGTGCAAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp AGAGTCGGCCTGTCTACCGTTGATCAAAGAACCATTAATAACCTCTaGATCAGGGAGGCAGGAATGATGCTGTGGAGGATCTCTATCATC +
Preference number: 6 (lower is better)
Translates to: RVGLSTVDQRTINNL*IREAGMMLWRISII
Trigger: GATGATAGAGATCCTCCACAGCATCATTCCTGCCTCCCTGATCAAGAGGTTATTAATGGTTCTTTGATCAACGGTAGACAGGCCGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp ATCAGGCATGAAACGAACAATACTTCCTCTCTTCTCTGTGGCAGGTaGTTGACGTCCAAGAATCATACTGCCACCAGTAGAGAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: IRHETNNTSSLLCGR*LTSKNHTATSRERK
Trigger: CTTCCTCTCTCTACTGGTGGCAGTATGATTCTTGGACGTCAACAACCTGCCACAGAGAAGAGAGGAAGTATTGTTCGTTTCATGCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp TGTACACAGCTTTGCCCAGCCATCTGTGATATGCTTTaGTTGAGGCTGGCCAAAGCACCAAATGTATTCAGG +
Preference number: 6 (lower is better)
Translates to: CTQLCPAICDML*LRLAKAPNVFR
Trigger: CCTGAATACATTTGGTGCTTTGGCCAGCCTCAATCAAAGCATATCACAGATGGCTGGGCAAAGCTGTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp TGGTTTAAACGTCTGACAATCAGAAAGGCGGATATCTaGGGCCACAGTATGGTCCACACGACCCTGCATATT +
Preference number: 6 (lower is better)
Translates to: WFKRLTIRKADI*GHSMVHTTLHI
Trigger: AATATGCAGGGTCGTGTGGACCATACTGTGGCCTCAGATATCCGCCTTTCTGATTGTCAGACGTTTAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp GGTGCTTTGGTTGTAAGGAAAGCTGAGAGGTCTGGGTaGCCTGAACAAGATTCCTCTTTTTCTGCATCTGAA +
Preference number: 6 (lower is better)
Translates to: GALVVRKAERSG*PEQDSSFSASE
Trigger: TTCAGATGCAGAAAAAGAGGAATCTTGTTCAGGGCACCCAGACCTCTCAGCTTTCCTTACAACCAAAGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp GCGGCCATTGCAAAATGTTCACTTGTTACAGATTCTTaGGAGGGTGGGCTGGACTTTTCTGCTGACTTAGAT +
Preference number: 6 (lower is better)
Translates to: AAIAKCSLVTDS*EGGLDFSADLD
Trigger: ATCTAAGTCAGCAGAAAAGTCCAGCCCACCCTCCCAAGAATCTGTAACAAGTGAACATTTTGCAATGGCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp TGCTGGTCACATCTTCTCTTGTTGTTTCAGGAAGCATaGATGCAACTGAGAAACTACGACTACTGCCAGAGC +
Preference number: 6 (lower is better)
Translates to: CWSHLLLLFQEA*MQLRNYDYCQS
Trigger: GCTCTGGCAGTAGTCGTAGTTTCTCAGTTGCATCCATGCTTCCTGAAACAACAAGAGAAGATGTGACCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp GACCTAGAATATGGCTTATGTTATGGGCAGGTCTGTTaGAGGACTGCTTGGAAGAGTCAGAGGCAGAGGAAT +
Preference number: 6 (lower is better)
Translates to: DLEYGLCYGQVC*RTAWKSQRQRN
Trigger: ATTCCTCTGCCTCTGACTCTTCCAAGCAGTCCTCAAACAGACCTGCCCATAACATAAGCCATATTCTAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp ATTCTGATTAGCAGCCTGTATGATTACTATCTGTTGACCTACTGTTaGGTTGGAAACTTCTGCCCTCATCACTGTTGGGCATGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: ILISSLYDYYLLTYC*VGNFCPHHCWAWGG
Trigger: ACCACCCCATGCCCAACAGTGATGAGGGCAGAAGTTTCCAACCAAACAGTAGGTCAACAGATAGTAATCATACAGGCTGCTAATCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp GGTGTTGGAACATTTTGCACTGAATTATTAGACCCTATTACAGTATaGGCTCCATTGATGGGGAGTCGAACAGAACCAGGAGGTGGAGCA +
Preference number: 6 (lower is better)
Translates to: GVGTFCTELLDPITV*APLMGSRTEPGGGA
Trigger: TGCTCCACCTCCTGGTTCTGTTCGACTCCCCATCAATGGAGCCAATACTGTAATAGGGTCTAATAATTCAGTGCAAAATGTTCCAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp ACCTTGCTGTCTGCTTCCAACATCCTGCTGTTGGTGCATAATATCTaGATTGAGATGGTTCTGGGGATGGTTATGATGGTTCCGACTAGT +
Preference number: 6 (lower is better)
Translates to: TLLSASNILLLVHNI*IEMVLGMVMMVPTS
Trigger: ACTAGTCGGAACCATCATAACCATCCCCAGAACCATCTCAATCAAGATATTATGCACCAACAGCAGGATGTTGGAAGCAGACAGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp AGTTGGTCATGTGCATTGGTGGCATATCTGGGAGAAGAGGAAAACTaGGTTGAGCAAACCCAACAGGTCTGGGAGGAGATAAAATTGATC +
Preference number: 6 (lower is better)
Translates to: SWSCALVAYLGEEEN*VEQTQQVWEEIKLI
Trigger: GATCAATTTTATCTCCTCCCAGACCTGTTGGGTTTGCTCAACCAAGTTTTCCTCTTCTCCCAGATATGCCACCAATGCACATGACCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp ATTTCTCTCTGGCCTGTGTGGAGTACAGGTCATGTCTaGAGATCTAGTCACAATACTTGGTTGGGACACCAT +
Preference number: 6 (lower is better)
Translates to: ISLWPVWSTGHV*RSSHNTWLGHH
Trigger: ATGGTGTCCCAACCAAGTATTGTGACTAGATCTTCAGACATGACCTGTACTCCACACAGGCCAGAGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp CCTAAGGGCTTGCAGAGTTTCTTCACTTTTGATTCCTaGCTTCCAATGCCTCCCGTTTCTGATCCAAATGTA +
Preference number: 6 (lower is better)
Translates to: PKGLQSFFTFDS*LPMPPVSDPNV
Trigger: TACATTTGGATCAGAAACGGGAGGCATTGGAAGCCAGGAATCAAAAGTGAAGAAACTCTGCAAGCCCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS CCA 72 bp CAGGTCATGTCTGAAGATCTAGTCACAATACTTGGTTaGGACACCATTTGCTGCTCTAAGCCTCTTGATGTC +
Preference number: 6 (lower is better)
Translates to: QVMSEDLVTILG*DTICCSKPLDV
Trigger: GACATCAAGAGGCTTAGAGCAGCAAATGGTGTCCCAACCAAGTATTGTGACTAGATCTTCAGACATGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp CCAAGAATCATACTGCCACCAGTAGAGAGAGGAAGATaGGGAAGACTTGGATCAAAGACAGTACTTTGCCTT +
Preference number: 6 (lower is better)
Translates to: PRIILPPVERGR*GRLGSKTVLCL
Trigger: AAGGCAAAGTACTGTCTTTGATCCAAGTCTTCCCCATCTTCCTCTCTCTACTGGTGGCAGTATGATTCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp AATAGGAACCTAAGGGCTTGCAGAGTTTCTTCACTTTaGATTCCTGGCTTCCAATGCCTCCCGTTTCTGATC +
Preference number: 6 (lower is better)
Translates to: NRNLRACRVSSL*IPGFQCLPFLI
Trigger: GATCAGAAACGGGAGGCATTGGAAGCCAGGAATCAAAAGTGAAGAAACTCTGCAAGCCCTTAGGTTCCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS CAA 72 bp AGCAGCCTGTATGATTACTATCTGTTGACCTACTGTTaGGTTGGAAACTTCTGCCCTCATCACTGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: SSLYDYYLLTYC*VGNFCPHHCWA
Trigger: TGCCCAACAGTGATGAGGGCAGAAGTTTCCAACCAAACAGTAGGTCAACAGATAGTAATCATACAGGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp ACTGAATTATTAGACCCTATTACAGTATTGGCTCCATaGATGGGGAGTCGAACAGAACCAGGAGGTGGAGCA +
Preference number: 6 (lower is better)
Translates to: TELLDPITVLAP*MGSRTEPGGGA
Trigger: TGCTCCACCTCCTGGTTCTGTTCGACTCCCCATCAATGGAGCCAATACTGTAATAGGGTCTAATAATTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp GGAGATGGAATCAATACATTGGCTGAAGCGCAGGGTTaGGCAGCATCTGATAATGCTAAACTACTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: GDGINTLAEAQG*AASDNAKLLGG
Trigger: ACCACCAAGTAGTTTAGCATTATCAGATGCTGCCAAACCCTGCGCTTCAGCCAATGTATTGATTCCATCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp AACCAGGAACCTGAGAAACCAAAATGTGAGGATCACTaGGAGATGGAATCAATACATTGGCTGAAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: NQEPEKPKCEDH*EMESIHWLKRR
Trigger: CCTGCGCTTCAGCCAATGTATTGATTCCATCTCCAAGTGATCCTCACATTTTGGTTTCTCAGGTTCCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp AGGAAGATGGGGAAGACTTGGATCAAAGACAGTACTTaGCCTTTGGTTTCCAGAACGATTCCTTTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: RKMGKTWIKDST*PLVSRTIPFRL
Trigger: CAGCCTGAAAGGAATCGTTCTGGAAACCAAAGGCAAAGTACTGTCTTTGATCCAAGTCTTCCCCATCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp GAGTGGCAAAGGATTCTGATTAGCAGCCTGTATGATTACTATCTGTaGACCTACTGTTTGGTTGGAAACTTCTGCCCTCATCACTGTTGG +
Preference number: 6 (lower is better)
Translates to: EWQRILISSLYDYYL*TYCLVGNFCPHHCW
Trigger: CCAACAGTGATGAGGGCAGAAGTTTCCAACCAAACAGTAGGTCAACAGATAGTAATCATACAGGCTGCTAATCAGAATCCTTTGCCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp TGCAATCATGACCTAGAATATGGCTTATGTTATGGGCAGGTCTGTTaGAGGACTGCTTGGAAGAGTCAGAGGCAGAGGAATTTGCTATTG +
Preference number: 6 (lower is better)
Translates to: CNHDLEYGLCYGQVC*RTAWKSQRQRNLLL
Trigger: CAATAGCAAATTCCTCTGCCTCTGACTCTTCCAAGCAGTCCTCAAACAGACCTGCCCATAACATAAGCCATATTCTAGGTCATGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp AATAGACAATTGTACACAGCTTTGCCCAGCCATCTGTaGTATGCTTTGATTGAGGCTGGCCAAAGCACCAAA +
Preference number: 6 (lower is better)
Translates to: NRQLYTALPSHL*YALIEAGQSTK
Trigger: TTTGGTGCTTTGGCCAGCCTCAATCAAAGCATATCACAGATGGCTGGGCAAAGCTGTGTACAATTGTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp TTACTAGGTGGAAATAATCGTGTAAGGCCATCTCCATaGGCTGGGTTGCTAACAGGCACAACTGAGTTTGAA +
Preference number: 6 (lower is better)
Translates to: LLGGNNRVRPSP*AGLLTGTTEFE
Trigger: TTCAAACTCAGTTGTGCCTGTTAGCAACCCAGCTCATGGAGATGGCCTTACACGATTATTTCCACCTAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp GGTAAAGATGGACAAGAAGGCAATGTTACAACTACTTaGTCAACTGGCTGCCCATCTGCTGGAAAGGAATTA +
Preference number: 6 (lower is better)
Translates to: GKDGQEGNVTTT*STGCPSAGKEL
Trigger: TAATTCCTTTCCAGCAGATGGGCAGCCAGTTGAGCAAGTAGTTGTAACATTGCCTTCTTGTCCATCTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp GATCTAGTCACAATACTTGGTTGGGACACCATTTGCTaGTCTAAGCCTCTTGATGTCAAAAGCCTCTGCATT +
Preference number: 6 (lower is better)
Translates to: DLVTILGWDTIC*SKPLDVKSLCI
Trigger: AATGCAGAGGCTTTTGACATCAAGAGGCTTAGAGCAGCAAATGGTGTCCCAACCAAGTATTGTGACTAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp CACTGTCCCTTGATGGAATACCATTTCCTGTTGGGATaGTCTGAACTGGTGGGTAAGATAATCTCTTTTGAC +
Preference number: 6 (lower is better)
Translates to: HCPLMEYHFLLG*SELVGKIISFD
Trigger: GTCAAAAGAGATTATCTTACCCACCAGTTCAGAGCATCCCAACAGGAAATGGTATTCCATCAAGGGACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp TGTTACAACTACTTGCTCAACTGGCTGCCCATCTGCTaGAAAGGAATTATTCAAGTTGATGTCTGTAGCCAC +
Preference number: 6 (lower is better)
Translates to: CYNYLLNWLPIC*KGIIQVDVCSH
Trigger: GTGGCTACAGACATCAACTTGAATAATTCCTTTCCAGCAGATGGGCAGCCAGTTGAGCAAGTAGTTGTAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp GAGATGGAATCAATACATTGGCTGAAGCGCAGGGTTTaGCAGCATCTGATAATGCTAAACTACTTGGTGGTT +
Preference number: 6 (lower is better)
Translates to: EMESIHWLKRRV*QHLIMLNYLVV
Trigger: AACCACCAAGTAGTTTAGCATTATCAGATGCTGCCAAACCCTGCGCTTCAGCCAATGTATTGATTCCATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp ACTGACCATCATTTGAGTTTGGTCAGAAATGGTGTCTaGAGTTCTGCTCATCAGGGACATACTTTCAAGCCT +
Preference number: 6 (lower is better)
Translates to: TDHHLSLVRNGV*SSAHQGHTFKP
Trigger: AGGCTTGAAAGTATGTCCCTGATGAGCAGAACTCCAGACACCATTTCTGACCAAACTCAAATGATGGTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp ACTGGCTGCCCATCTGCTGGAAAGGAATTATTCAAGTaGATGTCTGTAGCCACATATCTACTGTGGTTGCTT +
Preference number: 6 (lower is better)
Translates to: TGCPSAGKELFK*MSVATYLLWLL
Trigger: AAGCAACCACAGTAGATATGTGGCTACAGACATCAACTTGAATAATTCCTTTCCAGCAGATGGGCAGCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp AGAATTAGGAGGGATCTGACTGACCATCATTTGAGTTaGGTCAGAAATGGTGTCTGGAGTTCTGCTCATCAG +
Preference number: 6 (lower is better)
Translates to: RIRRDLTDHHLS*VRNGVWSSAHQ
Trigger: CTGATGAGCAGAACTCCAGACACCATTTCTGACCAAACTCAAATGATGGTCAGTCAGATCCCTCCTAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp ATGGGGAAGACTTGGATCAAAGACAGTACTTTGCCTTaGGTTTCCAGAACGATTCCTTTCAGGCTGACGAAT +
Preference number: 6 (lower is better)
Translates to: MGKTWIKDSTLP*VSRTIPFRLTN
Trigger: ATTCGTCAGCCTGAAAGGAATCGTTCTGGAAACCAAAGGCAAAGTACTGTCTTTGATCCAAGTCTTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp GGTTACAGTAATAGGAACCTAAGGGCTTGCAGAGTTTCTTCACTTTaGATTCCTGGCTTCCAATGCCTCCCGTTTCTGATCCAAATGTAT +
Preference number: 6 (lower is better)
Translates to: GYSNRNLRACRVSSL*IPGFQCLPFLIQMY
Trigger: ATACATTTGGATCAGAAACGGGAGGCATTGGAAGCCAGGAATCAAAAGTGAAGAAACTCTGCAAGCCCTTAGGTTCCTATTACTGTAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316407.9
ENST00000491165.5
CDS CAA 90 bp GGTGACAAGTATTTTCACTGTCCCTTGATGGAATACCATTTCCTGTaGGGATGCTCTGAACTGGTGGGTAAGATAATCTCTTTTGACGGT +
Preference number: 6 (lower is better)
Translates to: GDKYFHCPLMEYHFL*GCSELVGKIISFDG
Trigger: ACCGTCAAAAGAGATTATCTTACCCACCAGTTCAGAGCATCCCAACAGGAAATGGTATTCCATCAAGGGACAGTGAAAATACTTGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp TCAAGGGGCCTCTCCATAGTTGCTTCAATTGAACCCTaGGAATTAAATTCATTTGGTGTTGCTTCTGCCTGT +
Preference number: 6 (lower is better)
Translates to: SRGLSIVASIEP*ELNSFGVASAC
Trigger: ACAGGCAGAAGCAACACCAAATGAATTTAATTCTCAGGGTTCAATTGAAGCAACTATGGAGAGGCCCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp CAATGTTACAACTACTTGCTCAACTGGCTGCCCATCTaGTGGAAAGGAATTATTCAAGTTGATGTCTGTAGC +
Preference number: 6 (lower is better)
Translates to: QCYNYLLNWLPI*WKGIIQVDVCS
Trigger: GCTACAGACATCAACTTGAATAATTCCTTTCCAGCAGATGGGCAGCCAGTTGAGCAAGTAGTTGTAACATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp CCCCTTCTCAAGGTTCTCCTGGTCAAAAATAGCTCTTaGTGCAAGAGCTACTATATCAGTTTGCTCTACAAA +
Preference number: 6 (lower is better)
Translates to: PLLKVLLVKNSS*CKSYYISLLYK
Trigger: TTTGTAGAGCAAACTGATATAGTAGCTCTTGCAGCAAGAGCTATTTTTGACCAGGAGAACCTTGAGAAGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp TTATTCAAGTTGATGTCTGTAGCCACATATCTACTGTaGTTGCTTGTGGTGGGGCTAGTACCAGACTCATTT +
Preference number: 6 (lower is better)
Translates to: LFKLMSVATYLL*LLVVGLVPDSF
Trigger: AAATGAGTCTGGTACTAGCCCCACCACAAGCAACCACAGTAGATATGTGGCTACAGACATCAACTTGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp TGGACAAGAAGGCAATGTTACAACTACTTGCTCAACTaGCTGCCCATCTGCTGGAAAGGAATTATTCAAGTT +
Preference number: 6 (lower is better)
Translates to: WTRRQCYNYLLN*LPICWKGIIQV
Trigger: AACTTGAATAATTCCTTTCCAGCAGATGGGCAGCCAGTTGAGCAAGTAGTTGTAACATTGCCTTCTTGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp TTCAAAATTACTCTGGGGCTGTTGACTAGCTCCACTTaGTTTAAACGTCTGACAATCAGAAAGGCGGATATC +
Preference number: 6 (lower is better)
Translates to: FKITLGLLTSST*FKRLTIRKADI
Trigger: GATATCCGCCTTTCTGATTGTCAGACGTTTAAACCAAGTGGAGCTAGTCAACAGCCCCAGAGTAATTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp TTCAAGTTGATGTCTGTAGCCACATATCTACTGTGGTaGCTTGTGGTGGGGCTAGTACCAGACTCATTTAAT +
Preference number: 6 (lower is better)
Translates to: FKLMSVATYLLW*LVVGLVPDSFN
Trigger: ATTAAATGAGTCTGGTACTAGCCCCACCACAAGCAACCACAGTAGATATGTGGCTACAGACATCAACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp CGCAGGGTTTGGCAGCATCTGATAATGCTAAACTACTaGGTGGTTTATCCTGAGATGTCTCTTGTTGTAGAT +
Preference number: 6 (lower is better)
Translates to: RRVWQHLIMLNY*VVYPEMSLVVD
Trigger: ATCTACAACAAGAGACATCTCAGGATAAACCACCAAGTAGTTTAGCATTATCAGATGCTGCCAAACCCTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp TCTGCTTCCAACATCCTGCTGTTGGTGCATAATATCTaGATTGAGATGGTTCTGGGGATGGTTATGATGGTT +
Preference number: 6 (lower is better)
Translates to: SASNILLLVHNI*IEMVLGMVMMV
Trigger: AACCATCATAACCATCCCCAGAACCATCTCAATCAAGATATTATGCACCAACAGCAGGATGTTGGAAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp AAGGAATTATTCAAGTTGATGTCTGTAGCCACATATCTACTGTGGTaGCTTGTGGTGGGGCTAGTACCAGACTCATTTAATACTGGAGTC +
Preference number: 6 (lower is better)
Translates to: KELFKLMSVATYLLW*LVVGLVPDSFNTGV
Trigger: GACTCCAGTATTAAATGAGTCTGGTACTAGCCCCACCACAAGCAACCACAGTAGATATGTGGCTACAGACATCAACTTGAATAATTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp GTTTGCTCTACAAAGGTACAGCTGTCACATGTATTAGTTGTTGCATaGCTGGTCACATCTTCTCTTGTTGTTTCAGGAAGCATGGATGCA +
Preference number: 6 (lower is better)
Translates to: VCSTKVQLSHVLVVA*LVTSSLVVSGSMDA
Trigger: TGCATCCATGCTTCCTGAAACAACAAGAGAAGATGTGACCAGCAATGCAACAACTAATACATGTGACAGCTGTACCTTTGTAGAGCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp AGAAACACAGTCAGTACTTGTAGTGCTTGTTGTAGATaGCAAACCAGGAACCTGAGAAACCAAAATGTGAGG +
Preference number: 6 (lower is better)
Translates to: RNTVSTCSACCR*QTRNLRNQNVR
Trigger: CCTCACATTTTGGTTTCTCAGGTTCCTGGTTTGTCATCTACAACAAGCACTACAAGTACTGACTGTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp GTAGTTAAACCTTGCCCCTTTAAGAGACCTGTGGTTTaGATTGTATCTGATGAATCTTGCTCAACTCTGCAA +
Preference number: 6 (lower is better)
Translates to: VVKPCPFKRPVV*IVSDESCSTLQ
Trigger: TTGCAGAGTTGAGCAAGATTCATCAGATACAATGCAAACCACAGGTCTCTTAAAGGGGCAAGGTTTAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp CTCTACAAAGGTACAGCTGTCACATGTATTAGTTGTTaGATTGCTGGTCACATCTTCTCTTGTTGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: LYKGTAVTCISC*IAGHIFSCCFR
Trigger: CCTGAAACAACAAGAGAAGATGTGACCAGCAATGCAACAACTAATACATGTGACAGCTGTACCTTTGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp CTTCTCAAGGTTCTCCTGGTCAAAAATAGCTCTTGCTaGAAGAGCTACTATATCAGTTTGCTCTACAAAGGT +
Preference number: 6 (lower is better)
Translates to: LLKVLLVKNSSC*KSYYISLLYKG
Trigger: ACCTTTGTAGAGCAAACTGATATAGTAGCTCTTGCAGCAAGAGCTATTTTTGACCAGGAGAACCTTGAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp CAAAGCACCAAATGTATTCAGGGCAACATTGGTATTTaGATCTTCGCTGGTGGTGGGTTGAATAATTTGCAT +
Preference number: 6 (lower is better)
Translates to: QSTKCIQGNIGI*IFAGGGLNNLH
Trigger: ATGCAAATTATTCAACCCACCACCAGCGAAGATCCAAATACCAATGTTGCCCTGAATACATTTGGTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp AGGATTCTGATTAGCAGCCTGTATGATTACTATCTGTaGACCTACTGTTTGGTTGGAAACTTCTGCCCTCAT +
Preference number: 6 (lower is better)
Translates to: RILISSLYDYYL*TYCLVGNFCPH
Trigger: ATGAGGGCAGAAGTTTCCAACCAAACAGTAGGTCAACAGATAGTAATCATACAGGCTGCTAATCAGAATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp ACATTTTGCACTGAATTATTAGACCCTATTACAGTATaGGCTCCATTGATGGGGAGTCGAACAGAACCAGGA +
Preference number: 6 (lower is better)
Translates to: TFCTELLDPITV*APLMGSRTEPG
Trigger: TCCTGGTTCTGTTCGACTCCCCATCAATGGAGCCAATACTGTAATAGGGTCTAATAATTCAGTGCAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp TTAAACCTTGCCCCTTTAAGAGACCTGTGGTTTGCATaGTATCTGATGAATCTTGCTCAACTCTGCAAGGTT +
Preference number: 6 (lower is better)
Translates to: LNLAPLRDLWFA*YLMNLAQLCKV
Trigger: AACCTTGCAGAGTTGAGCAAGATTCATCAGATACAATGCAAACCACAGGTCTCTTAAAGGGGCAAGGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp ACAAAGGTACAGCTGTCACATGTATTAGTTGTTGCATaGCTGGTCACATCTTCTCTTGTTGTTTCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: TKVQLSHVLVVA*LVTSSLVVSGS
Trigger: GCTTCCTGAAACAACAAGAGAAGATGTGACCAGCAATGCAACAACTAATACATGTGACAGCTGTACCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp CTCCTGGTCAAAAATAGCTCTTGCTGCAAGAGCTACTATATCAGTTaGCTCTACAAAGGTACAGCTGTCACATGTATTAGTTGTTGCATT +
Preference number: 6 (lower is better)
Translates to: LLVKNSSCCKSYYIS*LYKGTAVTCISCCI
Trigger: AATGCAACAACTAATACATGTGACAGCTGTACCTTTGTAGAGCAAACTGATATAGTAGCTCTTGCAGCAAGAGCTATTTTTGACCAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 90 bp GAAAACTTGGTTGAGCAAACCCAACAGGTCTGGGAGGAGATAAAATaGATCCAAATCGGTTATTTAAACTTCCACTGTTTACCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: ENLVEQTQQVWEEIK*IQIGYLNFHCLPSL
Trigger: CAGAGAAGGTAAACAGTGGAAGTTTAAATAACCGATTTGGATCAATTTTATCTCCTCCCAGACCTGTTGGGTTTGCTCAACCAAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp TTAGACGCTGATAAAGATGAAGGTCTTGGTAATATGTaGACAAGATGCTTTCCTCCAAAAGTCTGTGGTGTT +
Preference number: 6 (lower is better)
Translates to: LDADKDEGLGNM*TRCFPPKVCGV
Trigger: AACACCACAGACTTTTGGAGGAAAGCATCTTGTCCACATATTACCAAGACCTTCATCTTTATCAGCGTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp TTTGGTATGGTACTAGTCATAGTATTTAGCTGTTCTTaGGAATATTCAGTCATCAGAGATGGTCCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: FGMVLVIVFSCS*EYSVIRDGPGG
Trigger: ACCTCCTGGACCATCTCTGATGACTGAATATTCCCAAGAACAGCTAAATACTATGACTAGTACCATACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp GAAGAGGAAAACTTGGTTGAGCAAACCCAACAGGTCTaGGAGGAGATAAAATTGATCCAAATCGGTTATTTA +
Preference number: 6 (lower is better)
Translates to: EEENLVEQTQQV*EEIKLIQIGYL
Trigger: TAAATAACCGATTTGGATCAATTTTATCTCCTCCCAGACCTGTTGGGTTTGCTCAACCAAGTTTTCCTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp TTGCAAAGTAGTCCACGTTGTCTGTGTGTTTCCAGCTaGAGAGATTCGTGTAAGGCTATTAATGTTTTTCAA +
Preference number: 6 (lower is better)
Translates to: LQSSPRCLCVSS*RDSCKAINVFQ
Trigger: TTGAAAAACATTAATAGCCTTACACGAATCTCTTCAGCTGGAAACACACAGACAACGTGGACTACTTTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp TCCTCCAAAAGTCTGTGGTGTTGGAACATTTTGCACTaGATTATTAGACCCTATTACAGTATTGGCTCCATT +
Preference number: 6 (lower is better)
Translates to: SSKSLWCWNILH*IIRPYYSIGSI
Trigger: AATGGAGCCAATACTGTAATAGGGTCTAATAATTCAGTGCAAAATGTTCCAACACCACAGACTTTTGGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp GCATCTGATAATGCTAAACTACTTGGTGGTTTATCCTaGGATGTCTCTTGTTGTAGATTAGGGGTAGAATCT +
Preference number: 6 (lower is better)
Translates to: ASDNAKLLGGLS*DVSCCRLGVES
Trigger: AGATTCTACCCCTAATCTACAACAAGAGACATCTCAGGATAAACCACCAAGTAGTTTAGCATTATCAGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CAA 72 bp GTTGAGCAAACCCAACAGGTCTGGGAGGAGATAAAATaGATCCAAATCGGTTATTTAAACTTCCACTGTTTA +
Preference number: 6 (lower is better)
Translates to: VEQTQQVWEEIK*IQIGYLNFHCL
Trigger: TAAACAGTGGAAGTTTAAATAACCGATTTGGATCAATTTTATCTCCTCCCAGACCTGTTGGGTTTGCTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp TGCAAAGCAAAGAGCTGTCCATTTAAAGAAATGGTTTaGGGCTGTTGGTTTGACATGGTAACAGAAAAAGTT +
Preference number: 6 (lower is better)
Translates to: CKAKSCPFKEMV*GCWFDMVTEKV
Trigger: AACTTTTTCTGTTACCATGTCAAACCAACAGCCTCAAACCATTTCTTTAAATGGACAGCTCTTTGCTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp AGATTATTCACACTTAAACTGGTGATGCTTGGTGGCTaGGAAGTTGAATCCTGTAAAGATGCATTTGATGTT +
Preference number: 6 (lower is better)
Translates to: RLFTLKLVMLGG*EVESCKDAFDV
Trigger: AACATCAAATGCATCTTTACAGGATTCAACTTCTCAGCCACCAAGCATCACCAGTTTAAGTGTGAATAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS GCA 72 bp AAAATAGCTCTTGCTGCAAGAGCTACTATATCAGTTTaGTCTACAAAGGTACAGCTGTCACATGTATTAGTT +
Preference number: 6 (lower is better)
Translates to: KIALAARATISV*STKVQLSHVLV
Trigger: AACTAATACATGTGACAGCTGTACCTTTGTAGAGCAAACTGATATAGTAGCTCTTGCAGCAAGAGCTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS CCA 72 bp TTTTGCCTTTTCAATTCTGTTATATATTTAAAGGCTTaGTCCAGGATCATATTCTTGCTCTGCTTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: FCLFNSVIYLKA*SRIIFLLCFRA
Trigger: TGCCCTGAAGCAGAGCAAGAATATGATCCTGGACCAAGCCTTTAAATATATAACAGAATTGAAAAGGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000491165.5
ENST00000496826.1
CDS CAA 72 bp AAAAATAGCTCTTGCTGCAAGAGCTACTATATCAGTTaGCTCTACAAAGGTACAGCTGTCACATGTATTAGT +
Preference number: 6 (lower is better)
Translates to: KNSSCCKSYYIS*LYKGTAVTCIS
Trigger: ACTAATACATGTGACAGCTGTACCTTTGTAGAGCAAACTGATATAGTAGCTCTTGCAGCAAGAGCTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1
CDS TCA 72 bp ACAGAGACCTTTGAGTTTTTAAGATTTCCTTTCCAGTaGATTGTCGGGTCATCATATAAGCATATGTCATTA +
Preference number: 6 (lower is better)
Translates to: TETFEFLRFPFQ*IVGSSYKHMSL
Trigger: TAATGACATATGCTTATATGATGACCCGACAATTCACTGGAAAGGAAATCTTAAAAACTCAAAGGTCTCTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316407.9
ENST00000478658.1
ENST00000496826.1