RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC5A (Homo sapiens)

Ensembl gene IDs: ENSG00000113763

Ensembl transcript IDs: ENST00000329542.9, ENST00000509580.2, ENST00000513890.1

Found 617 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCGGCTGGAGGGATGCCCTCCGGTGGACGGCAGGGCAGCACGATaGCCTGCTCCAGGGACACCTCCTTGGCCAGCGGCTCCTGCTCGA +
Preference number: 1 (lower is better)
Translates to: PRLEGCPPVDGRAAR*PAPGTPPWPAAPAR
Trigger: TCGAGCAGGAGCCGCTGGCCAAGGAGGTGTCCCTGGAGCAGGGCATCGTGCTGCCCTGCCGTCCACCGGAGGGCATCCCTCCAGCCGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 90 bp GCTGGAGGGATGCCCTCCGGTGGACGGCAGGGCAGCACGATGCCCTaGTCCAGGGACACCTCCTTGGCCAGCGGCTCCTGCTCGAAGTTC +
Preference number: 1 (lower is better)
Translates to: AGGMPSGGRQGSTMP*SRDTSLASGSCSKF
Trigger: GAACTTCGAGCAGGAGCCGCTGGCCAAGGAGGTGTCCCTGGAGCAGGGCATCGTGCTGCCCTGCCGTCCACCGGAGGGCATCCCTCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 90 bp GGTGTCCAGGTCAGTGCCCTGGCACTCCTCCCCTCCGTTGCGGGGTaGTGGGTCAGAGCACTCACGGCTCCGCCAGTGGGTGCAGTCCAG +
Preference number: 1 (lower is better)
Translates to: GVQVSALALLPSVAG*WVRALTAPPVGAVQ
Trigger: CTGGACTGCACCCACTGGCGGAGCCGTGAGTGCTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR TCA 90 bp CACACGAGGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTaGATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTG +
Preference number: 1 (lower is better)
Translates to: HTRHAWHVLVWWSCA*IQGLPPVRLWPSVL
Trigger: CAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCCTCGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR TCA 90 bp TGTCAGCAAGGCGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTaGTGTATACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGT +
Preference number: 1 (lower is better)
Translates to: CQQGGPVAPPGCAPA*CIHWGPGTGPPGPR
Trigger: ACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTATACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCCTTGCTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTaGATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: PRHTHTHHCTAWDSH*IFTGPAGQGTSRLG
Trigger: CCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR CCA 90 bp CCAGGCCCAGTGTGTGCGTGCATGGCCGTGTGTATGCGGGGCCCCTaGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACAC +
Preference number: 1 (lower is better)
Translates to: PGPVCACMAVCMRGP*RGTGGEVASHAHTH
Trigger: GTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGGCCCCGCATACACACGGCCATGCACGCACACACTGGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR GCA 90 bp TGTGTACACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTaGCCTGGCACTCCTCCCCTCCGTTGCGGGGTGCTGGGTCAGAGC +
Preference number: 1 (lower is better)
Translates to: CVHRGHWYSCGCPGQ*PGTPPLRCGVLGQS
Trigger: GCTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 90 bp ACACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTaGCACTCCTCCCCTCCGTTGCGGGGTGCTGGGTCAGAGCACTCA +
Preference number: 1 (lower is better)
Translates to: TQRSLVQLRVSRSVP*HSSPPLRGAGSEHS
Trigger: TGAGTGCTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGACCTCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 90 bp CCTCAGGGCCAGAAGCAGTGTGTACACAGAGGTCACTGGTACAGTTaGGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCCCCTCCGTTGC +
Preference number: 1 (lower is better)
Translates to: PQGQKQCVHRGHWYS*GCPGQCPGTPPLRC
Trigger: GCAACGGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACACTGCTTCTGGCCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 90 bp TGGGCAGCCCTGTCTGACCACAGAACGTTTCTGGTTTGGGGTCTTTaGTCTTTGGCGGCGTGGCGCCACTGCCGTGGTATCTGCCGTGGG +
Preference number: 1 (lower is better)
Translates to: WAALSDHRTFLVWGL*SLAAWRHCRGICRG
Trigger: CCCACGGCAGATACCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTCAGACAGGGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 90 bp TCAATGAACGTTCAGATGTTCCGGCCATGGGAGGCTGGAGTCGGATaGTCGGGGCAGAAGAGGACCCTGCGGTTCTCCTGCAGACCCTCC +
Preference number: 1 (lower is better)
Translates to: SMNVQMFRPWEAGVG*SGQKRTLRFSCRPS
Trigger: GGAGGGTCTGCAGGAGAACCGCAGGGTCCTCTTCTGCCCCGAGCATCCGACTCCAGCCTCCCATGGCCGGAACATCTGAACGTTCATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 90 bp CCTCCATGGTGGGCAGCCCTGTCTGACCACAGAACGTTTCTGGTTTaGGGTCTTTGGTCTTTGGCGGCGTGGCGCCACTGCCGTGGTATC +
Preference number: 1 (lower is better)
Translates to: PPWWAALSDHRTFLV*GLWSLAAWRHCRGI
Trigger: GATACCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTCAGACAGGGCTGCCCACCATGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 90 bp CCCTGTCTGACCACAGAACGTTTCTGGTTTGGGGTCTTTGGTCTTTaGCGGCGTGGCGCCACTGCCGTGGTATCTGCCGTGGGTAAGGAA +
Preference number: 1 (lower is better)
Translates to: PCLTTERFWFGVFGL*RRGATAVVSAVGKE
Trigger: TTCCTTACCCACGGCAGATACCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTCAGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 90 bp AGCAGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGACGGGCTaGAAGCCTGAGGTGAGAATGGACGAGTCAGCCACATCTGAGTCC +
Preference number: 1 (lower is better)
Translates to: SRWGLSALLGLMLTG*KPEVRMDESATSES
Trigger: GGACTCAGATGTGGCTGACTCGTCCATTCTCACCTCAGGCTTCCAGCCCGTCAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 90 bp GTTGAGAAATCGATGAGATCAATGAACGTTCAGATGTTCCGGCCATaGGAGGCTGGAGTCGGATGCTCGGGGCAGAAGAGGACCCTGCGG +
Preference number: 1 (lower is better)
Translates to: VEKSMRSMNVQMFRP*EAGVGCSGQKRTLR
Trigger: CCGCAGGGTCCTCTTCTGCCCCGAGCATCCGACTCCAGCCTCCCATGGCCGGAACATCTGAACGTTCATTGATCTCATCGATTTCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 90 bp GCCCCGGCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTaGGTGAATGCACTTAAGACAAAGTCAGGACACGAGCTTCACATG +
Preference number: 1 (lower is better)
Translates to: APAAGQGCVHKAKSK*VNALKTKSGHELHM
Trigger: CATGTGAAGCTCGTGTCCTGACTTTGTCTTAAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGCCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR CCA 90 bp TCTTTGGTCTTTGGCGGCGTGGCGCCACTGCCGTGGTATCTGCCGTaGGTAAGGAAAGCCTTTTTCTTCACCTCAAAGCACTCGATGGCT +
Preference number: 1 (lower is better)
Translates to: SLVFGGVAPLPWYLP*VRKAFFFTSKHSMA
Trigger: AGCCATCGAGTGCTTTGAGGTGAAGAAAAAGGCTTTCCTTACCCACGGCAGATACCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 90 bp TCTGGTTTGGGGTCTTTGGTCTTTGGCGGCGTGGCGCCACTGCCGTaGTATCTGCCGTGGGTAAGGAAAGCCTTTTTCTTCACCTCAAAG +
Preference number: 1 (lower is better)
Translates to: SGLGSLVFGGVAPLP*YLPWVRKAFFFTSK
Trigger: CTTTGAGGTGAAGAAAAAGGCTTTCCTTACCCACGGCAGATACCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR TCA 90 bp AGGAAAGCCTTTTTCTTCACCTCAAAGCACTCGATGGCTTTGGGTTaGGAAATCGATGAGATCAATGAACGTTCAGATGTTCCGGCCATG +
Preference number: 1 (lower is better)
Translates to: RKAFFFTSKHSMALG*EIDEINERSDVPAM
Trigger: CATGGCCGGAACATCTGAACGTTCATTGATCTCATCGATTTCTCAACCCAAAGCCATCGAGTGCTTTGAGGTGAAGAAAAAGGCTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGCCCCCTGTCCGGCTGTaGCCCTCGGTCCTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRPPVRL*PSVLQA
Trigger: AGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGG...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGTGTGGCCCTCGGTCCTaGAGGCTTGGAGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRCGPRS*RLGAGP
Trigger: GGGCCCTGCTCCAAGCCTGCAGGACCGAGGGCCACA...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGAGGCACTGTCCCTCCTaGGCCCTGGGGCCGAGTGTG +
Preference number: 2 (lower is better)
Translates to: LNPGATPCPAVALGPAGLRHCPS*ALGPSV
Trigger: CACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCT...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR TCA 90 bp CAGGCACTGTCCCTCCTGGGCCCTGGGGCCGAGTGTGAGTGGCAGTGCCAGCCTGGGTGCCAAAGCTGGTaGGAGTGTAGGTGTCGGGCC +
Preference number: 2 (lower is better)
Translates to: QALSLLGPGAECEWQCQPGCQSW*ECRCRA
Trigger: GGCCCGACACCTACACTCTCACCAGCTTTGGCACCC...AGGCTGGCACTGCCACTCACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGCCCCTGTCCGGCTTCTaGCTGTCCTTGGTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRPLSGF*LSLVGA
Trigger: GGCACCCACCAAGGACAGGCAGAAGCCGGACAGGGG...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCCCTGTCCGGCTTCTaGCTGTCCTTGGTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: VVVCLNPGATPCPAVALGPLSGF*LSLVGA
Trigger: GGCACCCACCAAGGACAGGCAGAAGCCGGACAGGGG...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGGGCCCAGTGTGTGCGTaGATGGCCGTGTGTATGCGG +
Preference number: 2 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRGPVCA*MAVCMR
Trigger: CCGCATACACACGGCCATGCACGCACACACTGGGCC...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR CAA 90 bp CGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTGATGTATACATaGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: RACRTTRLCSRVMYT*GSRDGSTRSSFRSH
Trigger: GTGGCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTATACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR GCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACTGTGGCCCTCGGTCCTaGAGGCTTGGAGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYCGPRS*RLGAGP
Trigger: GGGCCCTGCTCCAAGCCTGCAGGACCGAGGGCCACA...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCAGGCCATGGAGAGGTaGGAGTTCGGGCAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: VVVCLNPGATPCPAVALGQAMER*EFGQGL
Trigger: CAGACCCTGCCCGAACTCCCACCTCTCCATGGCCTG...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGTGGCTAGGCAGGCCATaGAGAGGTGGGAGTTCGGGC +
Preference number: 2 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRWLGRP*RGGSSG
Trigger: GCCCGAACTCCCACCTCTCCATGGCCTGCCTAGCCA...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp CGTGTCAGCAAGGCGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTGATGTACCCAGCAAGACAAGGTaGGCCCTGCTGCTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RVSKAGLSHHQAVLPRDVPSKTR*ALLLGR
Trigger: CCTGCCCAGCAGCAGGGCCCACCTTGTCTTGCTGGG...TACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCCTTGCTGACACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp CGTGTCAGCAAGGCGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTGATGTAGGGGTCTTTGGTCTTTaGCGGCGTGGCGCCACTGCC +
Preference number: 2 (lower is better)
Translates to: RVSKAGLSHHQAVLPRDVGVFGL*RRGATA
Trigger: GGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCC...TACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCCTTGCTGACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACAGATGGGCTGGGCCTaGCCCAGGCTCCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRAQMGWA*PRLQAL
Trigger: CAGTGCCTGGAGCCTGGGCCAGGCCCAGCCCATCTG...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp CACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCTCTGGCACCTCCGCTaGGGCCGGGAGAGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: HRGHWYSCGCPGQCPGTPLWHLR*GRERLW
Trigger: CCAGAGCCTCTCCCGGCCCCAGCGGAGGTGCCAGAG...AGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGACCTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CAA 90 bp GCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATaGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: ATPHTHSPLYSLGLP*HIHRPRRAGHLKAG
Trigger: CCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGAGGGCCCCTCAGACGTaGCCCTACCCAGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQRAPQT*PYPAGT
Trigger: TGTGCCTGCTGGGTAGGGGCACGTCTGAGGGGCCCT...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGAGGGCCCCTCAGACGTaGCCCTACCCAGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLRAPQT*PYPAGT
Trigger: TGTGCCTGCTGGGTAGGGGCACGTCTGAGGGGCCCT...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGCTTCTGCCTGTCCTTaGTGGGTGCCAAAGCTGGTG +
Preference number: 2 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPASACP*WVPKLV
Trigger: CACCAGCTTTGGCACCCACCAAGGACAGGCAGAAGC...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACTGGCTAGGCAGGCCATaGAGAGGTGGGAGTTCGGGC +
Preference number: 2 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYWLGRP*RGGSSG
Trigger: GCCCGAACTCCCACCTCTCCATGGCCTGCCTAGCCA...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCTCGGTCCTGCAGGCTTaGAGCAGGGCCCCTCAGACG +
Preference number: 2 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCSVLQA*SRAPQT
Trigger: CGTCTGAGGGGCCCTGCTCCAAGCCTGCAGGACCGA...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp CGTGTCAGCAAGGCGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTGATGTACTGGTTTGGGGTCTTTaGTCTTTGGCGGCGTGGCGC +
Preference number: 2 (lower is better)
Translates to: RVSKAGLSHHQAVLPRDVLVWGL*SLAAWR
Trigger: GCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAG...TACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCCTTGCTGACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp GTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCCCCTCCTGCGGACCTCCATGGTaGGCAGCCCTGTCTGACCAC +
Preference number: 2 (lower is better)
Translates to: VTGTVAGVQVSALALLPSCGPPW*AALSDH
Trigger: GTGGTCAGACAGGGCTGCCCACCATGGAGGTCCGCA...GGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp CACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCCACTCCACCTCGGCTaGAGGGATGCCCTCCGGTGG +
Preference number: 2 (lower is better)
Translates to: HRGHWYSCGCPGQCPGTPPLHLG*RDALRW
Trigger: CCACCGGAGGGCATCCCTCCAGCCGAGGTGGAGTGG...AGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGACCTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR TCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTAGTTCGGGCAGGGTCTaGAGGACCAGCATTAAGGGA +
Preference number: 2 (lower is better)
Translates to: VVVCLNPGATPCPAVALGSSGRV*RTSIKG
Trigger: TCCCTTAATGCTGGTCCTTCAGACCCTGCCCGAACT...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR TCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCCCCTGGGGCCGAGTGTaGGTGGCAGTGCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGPWGRV*VAVPAW
Trigger: CCAGGCTGGCACTGCCACTCACACTCGGCCCCAGGG...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGGGCCCAGTGTGTGCGTaGATGGCCGTGTGTATGCGG +
Preference number: 2 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQGPVCA*MAVCMR
Trigger: CCGCATACACACGGCCATGCACGCACACACTGGGCC...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp TACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCACTCCACGGCAGAAGAGGACCCTaGGGTTCTCCTGCAGACCCT +
Preference number: 2 (lower is better)
Translates to: YIGVQGRVHQVLVPEPLHGRRGP*GSPADP
Trigger: AGGGTCTGCAGGAGAACCGCAGGGTCCTCTTCTGCC...GTGGAGTGGCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAGTGGCAGTGCCAGCCTaGCTAGGCAGGCCATGGAGA +
Preference number: 2 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRAVAVPA*LGRPWR
Trigger: TCTCCATGGCCTGCCTAGCCAGGCTGGCACTGCCAC...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTATACACACACACAGATaGGCTGGGCCTGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: VARARVVVVCLNPGATPCIHTHR*AGPGPG
Trigger: GCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTAT...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp TGGAAGCCTGAGGTGAGAATGGACGAGTCAGCCACATCTGAGTCCAGCCCCTCCCCGGCCATGGGAGGCTaGAGTCGGATGCTCGGGGCA +
Preference number: 2 (lower is better)
Translates to: WKPEVRMDESATSESSPSPAMGG*SRMLGA
Trigger: TGCCCCGAGCATCCGACTCCAGCCTCCCATGGCCGG...GGAGGGGCTGGACTCAGATGTGGCTGACTCGTCCATTCTCACCTCAGGCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR GCA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCCCCAGGCCCAGTGTGTaGGTGCATGGCCGTGTGTAT +
Preference number: 2 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCPRPSV*VHGRVY
Trigger: ATACACACGGCCATGCACGCACACACTGGGCCTGGG...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGCGTGTGGTGGTCGTGTaGCTGAATCCAGGGGCTACC +
Preference number: 2 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQRVVVV*LNPGAT
Trigger: GGTAGCCCCTGGATTCAGGCACACGACCACCACACG...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCCGTGTGGTGGTCGTGTaGCTGAATCCAGGGGCTACC +
Preference number: 2 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCRVVVV*LNPGAT
Trigger: GGTAGCCCCTGGATTCAGGCACACGACCACCACACG...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp GTGCCCTGGCACTCCTCCCCTCCGTTGCGGGGTGCTGGGTCAGAGCACTCACGGTGCGCAAATAGGCTATaGGGATGTAGGCCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: VPWHSSPPLRGAGSEHSRCANRL*GCRPSD
Trigger: GTCAGAAGGCCTACATCCGCATAGCCTATTTGCGCA...CCGTGAGTGCTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTGCCAGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp GCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGTCTGCCTGTCCTTGGTaGGTGCCAAAGCTGGTGAGA +
Preference number: 2 (lower is better)
Translates to: ARVVVVCLNPGATPCPAVSACPW*VPKLVR
Trigger: TCTCACCAGCTTTGGCACCCACCAAGGACAGGCAGA...CACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGCTTCTGCCTGTCCTTaGTGGGTGCCAAAGCTGGTG +
Preference number: 2 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCASACP*WVPKLV
Trigger: CACCAGCTTTGGCACCCACCAAGGACAGGCAGAAGC...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCCAGCTCTCCCCGGTGTaGGGAAGGGCCCCTGTCCGG +
Preference number: 2 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFQLSPV*GRAPVR
Trigger: CCGGACAGGGGCCCTTCCCCACACCGGGGAGAGCTG...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCAGGCACTGTCCCTCCTaGGCCCTGGGGCCGAGTGTG +
Preference number: 2 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGRHCPS*ALGPSV
Trigger: CACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCT...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGATACACACACACAGATaGGCTGGGCCTGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLIHTHR*AGPGPG
Trigger: GCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTAT...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp GGGCCAGAAGCAGTGTGTACACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGAGGGATGCCCTCCGGTaGACGGCAGGGCAGCACGAT +
Preference number: 2 (lower is better)
Translates to: GPEAVCTQRSLVQLRVSRRDALR*TAGQHD
Trigger: ATCGTGCTGCCCTGCCGTCCACCGGAGGGCATCCCT...CCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACACTGCTTCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CAA 90 bp TCCTCAGGGCCAGAAGCAGTGTGTACACAGAGGTCACTGGTACAGTaGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCCCCTCCGTTG +
Preference number: 2 (lower is better)
Translates to: SSGPEAVCTQRSLVQ*RVSRSVPWHSSPPL
Trigger: CAACGGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACACTGCTTCTGGCCCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR TCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACAGGGTGCCAAAGCTGGTaGGAGTGTAGGTGTCGGGCC +
Preference number: 2 (lower is better)
Translates to: PLERDGRRGSITRTYTHTGCQSW*ECRCRA
Trigger: GGCCCGACACCTACACTCTCACCAGCTTTGGCACCC...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR GCA 90 bp GGGCCAGAAGCAGTGTGTACACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGGAGGCTGGAGTCGGATaGTCGGGGCAGAAGAGGACC +
Preference number: 2 (lower is better)
Translates to: GPEAVCTQRSLVQLRVSREAGVG*SGQKRT
Trigger: GGTCCTCTTCTGCCCCGAGCATCCGACTCCAGCCTC...CCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACACTGCTTCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACACAGGCCATGGAGAGGTaGGAGTTCGGGCAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: PLERDGRRGSITRTYTHTQAMER*EFGQGL
Trigger: CAGACCCTGCCCGAACTCCCACCTCTCCATGGCCTG...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCGTGGCAGTGCCAGCCTaGCTAGGCAGGCCATGGAGA +
Preference number: 2 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSVAVPA*LGRPWR
Trigger: TCTCCATGGCCTGCCTAGCCAGGCTGGCACTGCCAC...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp TCCGGCTGGATGGTGAGCAGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGGTGGCGCCACTGCCGTaGTATCTGCCGTGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: SGWMVSRWGLSALLGLMLVAPLP*YLPWVR
Trigger: CCTTACCCACGGCAGATACCACGGCAGTGGCGCCAC...CAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTGCTCACCATCCAGCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp GGGCCAGAAGCAGTGTGTACACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGTGGTCTTTGGCGGCGTaGCGCCACTGCCGTGGTATC +
Preference number: 2 (lower is better)
Translates to: GPEAVCTQRSLVQLRVSRWSLAA*RHCRGI
Trigger: GATACCACGGCAGTGGCGCCACGCCGCCAAAGACCA...CCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACACTGCTTCTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp TCCGGCTGGATGGTGAGCAGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGTCCGTTGCGGGGTGCTaGGTCAGAGCACTCACGGCT +
Preference number: 2 (lower is better)
Translates to: SGWMVSRWGLSALLGLMLSVAGC*VRALTA
Trigger: AGCCGTGAGTGCTCTGACCCAGCACCCCGCAACGGA...CAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTGCTCACCATCCAGCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR GCA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATGGCATGCGTGGCACGTaGTCGTGTGGTGGTCGTGTG +
Preference number: 2 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYGMRGT*SCGGRV
Trigger: CACACGACCACCACACGAGCACGTGCCACGCATGCC...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCTGTATGCGGGGCCCCTaGAGAGGGACGGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFCMRGP*RGTGGE
Trigger: CTCTCCTCCCGTCCCTCTCCAGGGGCCCCGCATACA...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTTGTATGCGGGGCCCCTaGAGAGGGACGGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALCMRGP*RGTGGE
Trigger: CTCTCCTCCCGTCCCTCTCCAGGGGCCCCGCATACA...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp CAGCCCTGTCTGACCACAGAACGTTTCTGGTTTGGGGTCTTTGGTCTTTGGCGGGGCCGGGAGAGGCTCTaGTCCTGGGAGGTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: QPCLTTERFWFGVFGLWRGRERL*SWEVLV
Trigger: CACCAACACCTCCCAGGACCAGAGCCTCTCCCGGCC...CCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTCAGACAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp TGGAAGCCTGAGGTGAGAATGGACGAGTCAGCCACATCTGAGTCCAGCCCCTCCCAGATGTTCCGGCCATaGGAGGCTGGAGTCGGATGC +
Preference number: 2 (lower is better)
Translates to: WKPEVRMDESATSESSPSQMFRP*EAGVGC
Trigger: GCATCCGACTCCAGCCTCCCATGGCCGGAACATCTG...GGAGGGGCTGGACTCAGATGTGGCTGACTCGTCCATTCTCACCTCAGGCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR TCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCCACCAACACTGGGCGTaGGACGTGAGCAGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFHQHWA*DVSSLR
Trigger: CCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTG...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCATCTGCCTGTCCTTGGTaGGTGCCAAAGCTGGTGAGA +
Preference number: 2 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPSACPW*VPKLVR
Trigger: TCTCACCAGCTTTGGCACCCACCAAGGACAGGCAGA...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp TACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCACTCCACCCGTGGTATCTGCCGTaGGTAAGGAAAGCCTTTTTC +
Preference number: 2 (lower is better)
Translates to: YIGVQGRVHQVLVPEPLHPWYLP*VRKAFF
Trigger: GAAAAAGGCTTTCCTTACCCACGGCAGATACCACGG...GTGGAGTGGCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR TCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCACTGGGCGTGAGACGTaGGCAGCCTCAGGTGTACAG +
Preference number: 2 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFTGRET*AASGVQ
Trigger: CTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGT...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTGTGTCCCTGGGTGGGTaGAGAGGGCAGCATGTGAGA +
Preference number: 2 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALVSLGG*RGQHVR
Trigger: TCTCACATGCTGCCCTCTCCACCCACCCAGGGACAC...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR TCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCAGTTCGGGCAGGGTCTaGAGGACCAGCATTAAGGGA +
Preference number: 2 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGSSGRV*RTSIKG
Trigger: TCCCTTAATGCTGGTCCTTCAGACCCTGCCCGAACT...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR TCA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATGGAGAGGGCAGCATGTaGGAGGCAAATGTGCACCAA +
Preference number: 2 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYGEGSM*EANVHQ
Trigger: TTGGTGCACATTTGCCTCTCACATGCTGCCCTCTCC...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR TCA 90 bp AGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGACGGGCTGGAAGCCTGAGGGCAATAAACGAGGATaGGGACAAGCAGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: RWGLSALLGLMLTGWKPEGNKRG*GQAAAG
Trigger: TCCTGCTGCTGCTTGTCCTCATCCTCGTTTATTGCC...CTCAGGCTTCCAGCCCGTCAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR GCA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTGTGAGAGGCAAATGTaGACCAACACTGGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYCERQM*TNTGRE
Trigger: CTCACGCCCAGTGTTGGTGCACATTTGCCTCTCACA...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CCA 90 bp CACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTAGCACTCGATGGCTTTaGGTTGAGAAATCGATGAGA +
Preference number: 2 (lower is better)
Translates to: HRGHWYSCGCPGQCPGTPSTRWL*VEKSMR
Trigger: TCTCATCGATTTCTCAACCCAAAGCCATCGAGTGCT...AGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGACCTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp GGGCCAGAAGCAGTGTGTACACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGCCTCAAAGCACTCGATaGCTTTGGGTTGAGAAATCG +
Preference number: 2 (lower is better)
Translates to: GPEAVCTQRSLVQLRVSRPQSTR*LWVEKS
Trigger: CGATTTCTCAACCCAAAGCCATCGAGTGCTTTGAGG...CCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACACTGCTTCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CCA 90 bp TCCGGCTGGATGGTGAGCAGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGAGAACGTTTCTGGTTTaGGGTCTTTGGTCTTTGGCG +
Preference number: 2 (lower is better)
Translates to: SGWMVSRWGLSALLGLMLRTFLV*GLWSLA
Trigger: CGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCT...CAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTGCTCACCATCCAGCCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR TCA 90 bp TGGAAGCCTGAGGTGAGAATGGACGAGTCAGCCACATCTGAGTCCAGCCCCTCCTCGATGGCTTTGGGTTaGGAAATCGATGAGATCAAT +
Preference number: 2 (lower is better)
Translates to: WKPEVRMDESATSESSPSSMALG*EIDEIN
Trigger: ATTGATCTCATCGATTTCTCAACCCAAAGCCATCGA...GGAGGGGCTGGACTCAGATGTGGCTGACTCGTCCATTCTCACCTCAGGCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR GCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTAGGCACAGAAATGTTTaGATAAGGTCCAGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALRHRNV*IRSSSG
Trigger: GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCT...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR CCA 72 bp CACATGACAGGCCCCGCGTGGGGCACCAGCCAGCCCTaGGGACGGGCACGCCACGCCACACACACACTCACC +
Preference number: 3 (lower is better)
Translates to: HMTGPAWGTSQP*GRARHATHTLT
Trigger: GGTGAGTGTGTGTGTGGCGTGGCGTGCCCGTCCCCAGGGCTGGCTGGTGCCCCACGCGGGGCCTGTCATGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR GCA 72 bp ATGCCCTCCGGTGGACGGCAGGGCAGCACGATGCCCTaGTCCAGGGACACCTCCTTGGCCAGCGGCTCCTGC +
Preference number: 3 (lower is better)
Translates to: MPSGGRQGSTMP*SRDTSLASGSC
Trigger: GCAGGAGCCGCTGGCCAAGGAGGTGTCCCTGGAGCAGGGCATCGTGCTGCCCTGCCGTCCACCGGAGGGCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 72 bp GTCAGTGCCCTGGCACTCCTCCCCTCCGTTGCGGGGTaGTGGGTCAGAGCACTCACGGCTCCGCCAGTGGGT +
Preference number: 3 (lower is better)
Translates to: VSALALLPSVAG*WVRALTAPPVG
Trigger: ACCCACTGGCGGAGCCGTGAGTGCTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTGCCAGGGCACTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR TCA 72 bp CATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTaGATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCC +
Preference number: 3 (lower is better)
Translates to: HAWHVLVWWSCA*IQGLPPVRLWP
Trigger: GGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CAA 90 bp GTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCCCCTCCCCACAGGCCGACCACTaGCTCCACGGGCTCCAGCTG +
Preference number: 3 (lower is better)
Translates to: VTGTVAGVQVSALALLPSPQADH*LHGLQL
Trigger: CAGCTGGAGCCCGTGGAGCAAGTGGTCGGCCTGTGG...GGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR TCA 72 bp GGCGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTaGTGTATACATTGGGGTCCAGGGACGGGTCCACCA +
Preference number: 3 (lower is better)
Translates to: GGPVAPPGCAPA*CIHWGPGTGPP
Trigger: TGGTGGACCCGTCCCTGGACCCCAATGTATACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 72 bp GAGGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTaGCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTG +
Preference number: 3 (lower is better)
Translates to: EACVARARVVVV*LNPGATPCPAV
Trigger: CACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CAA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGGGCTTCTGCCTGTCCTaGGTGGGTGCCAAAGCTGGT +
Preference number: 3 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRGFCLS*VGAKAG
Trigger: ACCAGCTTTGGCACCCACCAAGGACAGGCAGAAGCC...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR CCA 72 bp TCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTaGCACTCCTCCCCTCCGTTGCGGGGTGCTGGGTCA +
Preference number: 3 (lower is better)
Translates to: SLVQLRVSRSVP*HSSPPLRGAGS
Trigger: TGACCCAGCACCCCGCAACGGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CAA 90 bp GAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCTGCTGGTCCTGGGAGGTGTaGGTGCCCAGGGTTCTGTTG +
Preference number: 3 (lower is better)
Translates to: EDPAVLLQTLPARQGGPCWSWEV*VPRVLL
Trigger: CAACAGAACCCTGGGCACCAACACCTCCCAGGACCA...GCAGGGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 72 bp AGGCTGGAGTCGGATGCTCGGGGCAGAAGAGGACCCTaGGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGG +
Preference number: 3 (lower is better)
Translates to: RLESDARGRRGP*GSPADPPSKTR
Trigger: CCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTCTTCTGCCCCGAGCATCCGACTCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 72 bp GTGTCAGCAAGGCGGGCCTGTCGCACCACCAGGCTGTaGTCCCGCGTGATGTATACATTGGGGTCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: VSARRACRTTRL*SRVMYTLGSRD
Trigger: GTCCCTGGACCCCAATGTATACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCCTTGCTGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CAA 90 bp GTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCCCCTCCTCTGGTTTGGGGTCTTaGGTCTTTGGCGGCGTGGCG +
Preference number: 3 (lower is better)
Translates to: VTGTVAGVQVSALALLPSSGLGS*VFGGVA
Trigger: CGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGA...GGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 72 bp GTGTGTGAGATGAGCACACGAGGCATGCGTGGCACGTaGTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGC +
Preference number: 3 (lower is better)
Translates to: VCEMSTRGMRGT*SCGGRVPESRG
Trigger: GCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCCTCGTGTGCTCATCTCACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR CCA 72 bp ACGCCACGCCACACACACACTCACCACTGTACAGCCTaGGACTCCCATTGCATATTCACAGGCCCCGCCGGG +
Preference number: 3 (lower is better)
Translates to: TPRHTHTHHCTA*DSHCIFTGPAG
Trigger: CCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CAA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTCTCGGTCCTGCAGGCTaGGAGCAGGGCCCCTCAGAC +
Preference number: 3 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALLGPAG*EQGPSD
Trigger: GTCTGAGGGGCCCTGCTCCAAGCCTGCAGGACCGAG...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR TCA 72 bp ATGCACTTAAGACAAAGTCAGGACACGAGCTTCACATaGCAGGCCCCGCGTGGGGCACCAGCCAGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: MHLRQSQDTSFT*QAPRGAPASPG
Trigger: CCCAGGGCTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGTCTTAAGTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR GCA 72 bp ACACACACTCACCACTGTACAGCCTGGGACTCCCATTaGATATTCACAGGCCCCGCCGGGCAGGGCACCTCA +
Preference number: 3 (lower is better)
Translates to: THTHHCTAWDSH*IFTGPAGQGTS
Trigger: TGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR CCA 72 bp TGGGCAGCCCTGTCTGACCACAGAACGTTTCTGGTTTaGGGTCTTTGGTCTTTGGCGGCGTGGCGCCACTGC +
Preference number: 3 (lower is better)
Translates to: WAALSDHRTFLV*GLWSLAAWRHC
Trigger: GCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTCAGACAGGGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 72 bp CATGGTGGGCAGCCCTGTCTGACCACAGAACGTTTCTaGTTTGGGGTCTTTGGTCTTTGGCGGCGTGGCGCC +
Preference number: 3 (lower is better)
Translates to: HGGQPCLTTERF*FGVFGLWRRGA
Trigger: GGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTCAGACAGGGCTGCCCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 72 bp CCTCAGGGCCAGAAGCAGTGTGTACACAGAGGTCACTaGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGC +
Preference number: 3 (lower is better)
Translates to: PQGQKQCVHRGH*YSCGCPGQCPG
Trigger: GCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACACTGCTTCTGGCCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CAA 90 bp TGGAAGCCTGAGGTGAGAATGGACGAGTCAGCCACATCTGAGTCCAGCCCCTCCCGCGTGATGTATACATaGGGGTCCAGGGACGGGTCC +
Preference number: 3 (lower is better)
Translates to: WKPEVRMDESATSESSPSRVMYT*GSRDGS
Trigger: GGACCCGTCCCTGGACCCCAATGTATACATCACGCG...GGAGGGGCTGGACTCAGATGTGGCTGACTCGTCCATTCTCACCTCAGGCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR GCA 72 bp CAGAAGCAGTGTGTACACAGAGGTCACTGGTACAGTTaGGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCCC +
Preference number: 3 (lower is better)
Translates to: QKQCVHRGHWYS*GCPGQCPGTPP
Trigger: GGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACACTGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 72 bp ATCAATGAACGTTCAGATGTTCCGGCCATGGGAGGCTaGAGTCGGATGCTCGGGGCAGAAGAGGACCCTGCG +
Preference number: 3 (lower is better)
Translates to: INERSDVPAMGG*SRMLGAEEDPA
Trigger: CGCAGGGTCCTCTTCTGCCCCGAGCATCCGACTCCAGCCTCCCATGGCCGGAACATCTGAACGTTCATTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 72 bp ACCACAGAACGTTTCTGGTTTGGGGTCTTTGGTCTTTaGCGGCGTGGCGCCACTGCCGTGGTATCTGCCGTG +
Preference number: 3 (lower is better)
Translates to: TTERFWFGVFGL*RRGATAVVSAV
Trigger: CACGGCAGATACCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CAA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTCAGGCACAGAAATGTTaGCATAAGGTCCAGCTCAGG +
Preference number: 3 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCQAQKC*HKVQLR
Trigger: CCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTG...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CAA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCGGCTTCTGCCTGTCCTaGGTGGGTGCCAAAGCTGGT +
Preference number: 3 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFGFCLS*VGAKAG
Trigger: ACCAGCTTTGGCACCCACCAAGGACAGGCAGAAGCC...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CAA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCAGGCACAGAAATGTTaGCATAAGGTCCAGCTCAGG +
Preference number: 3 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLQAQKC*HKVQLR
Trigger: CCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTG...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR-3UTR CAA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTAGCCTGGGACTCCCATaGCATATTCACAGGCCCCGC +
Preference number: 3 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALSLGLP*HIHRPR
Trigger: GCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCT...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR CCA 72 bp GGGTCTTTGGTCTTTGGCGGCGTGGCGCCACTGCCGTaGTATCTGCCGTGGGTAAGGAAAGCCTTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: GSLVFGGVAPLP*YLPWVRKAFFF
Trigger: GAAGAAAAAGGCTTTCCTTACCCACGGCAGATACCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 72 bp CTGTCTGACCACAGAACGTTTCTGGTTTGGGGTCTTTaGTCTTTGGCGGCGTGGCGCCACTGCCGTGGTATC +
Preference number: 3 (lower is better)
Translates to: LSDHRTFLVWGL*SLAAWRHCRGI
Trigger: GATACCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTCAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 72 bp GGGTTGTCTGCTTTGCTGGGCTTGATGCTGACGGGCTaGAAGCCTGAGGTGAGAATGGACGAGTCAGCCACA +
Preference number: 3 (lower is better)
Translates to: GLSALLGLMLTG*KPEVRMDESAT
Trigger: TGTGGCTGACTCGTCCATTCTCACCTCAGGCTTCCAGCCCGTCAGCATCAAGCCCAGCAAAGCAGACAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR-3UTR CAA 90 bp GTGATGTATACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCAGAACGTTTCTGGTTaGGGGTCTTTGGTCTTTGGC +
Preference number: 3 (lower is better)
Translates to: VMYTLGSRDGSTRSSFRSQNVSG*GSLVFG
Trigger: GCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTG...GCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTATACATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 72 bp TCGATGAGATCAATGAACGTTCAGATGTTCCGGCCATaGGAGGCTGGAGTCGGATGCTCGGGGCAGAAGAGG +
Preference number: 3 (lower is better)
Translates to: SMRSMNVQMFRP*EAGVGCSGQKR
Trigger: CCTCTTCTGCCCCGAGCATCCGACTCCAGCCTCCCATGGCCGGAACATCTGAACGTTCATTGATCTCATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CCA 72 bp TTTGGCGGCGTGGCGCCACTGCCGTGGTATCTGCCGTaGGTAAGGAAAGCCTTTTTCTTCACCTCAAAGCAC +
Preference number: 3 (lower is better)
Translates to: FGGVAPLPWYLP*VRKAFFFTSKH
Trigger: GTGCTTTGAGGTGAAGAAAAAGGCTTTCCTTACCCACGGCAGATACCACGGCAGTGGCGCCACGCCGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR TCA 72 bp GAGAGGCAAATGTGCACCAACACTGGGCGTGAGACGTaGGCAGCCTCAGGTGTACAGCATGAGATGTGTGTG +
Preference number: 3 (lower is better)
Translates to: ERQMCTNTGRET*AASGVQHEMCV
Trigger: CACACACATCTCATGCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR GCA 72 bp GCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTaGGTGAATGCACTTAAGACAAAGTCAGGACACGAG +
Preference number: 3 (lower is better)
Translates to: AGQGCVHKAKSK*VNALKTKSGHE
Trigger: CTCGTGTCCTGACTTTGTCTTAAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR TCA 72 bp GGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTaGATGCACTTAAGACAAAGTCAGGACACGAGCTTC +
Preference number: 3 (lower is better)
Translates to: GKAVYIRPRVSA*MHLRQSQDTSF
Trigger: GAAGCTCGTGTCCTGACTTTGTCTTAAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR CCA 72 bp AAGCCTTTTTCTTCACCTCAAAGCACTCGATGGCTTTaGGTTGAGAAATCGATGAGATCAATGAACGTTCAG +
Preference number: 3 (lower is better)
Translates to: KPFSSPQSTRWL*VEKSMRSMNVQ
Trigger: CTGAACGTTCATTGATCTCATCGATTTCTCAACCCAAAGCCATCGAGTGCTTTGAGGTGAAGAAAAAGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp AGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGTGGGGGGGCCCACCAGGGCTaGGACCCCCGCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: RDSFGREGACPSSSPRCGGAHQG*DPRFTL
Trigger: GAGAGTGAAGCGGGGGTCCCAGCCCTGGTGGGCCCC...CCCACACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCT
73% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGTGGGCTGGGTTGGCCACGGTaGCACTCTGCTGGGCACCCG +
Preference number: 4 (lower is better)
Translates to: RDSFGREGACPSSSPRCGLGWPR*HSAGHP
Trigger: CGGGTGCCCAGCAGAGTGCCACCGTGGCCAACCCAG...CCCACACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGGGCTCCGCCAGTGGGTaGAGTCCAGCCCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRGSASG*SPAHRP
Trigger: CGGCCTGTGGGCTGGACTGCACCCACTGGCGGAGCC...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGGGGCTGGGCCCATCCTaGCGGGGACAGAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRGLGPS*RGQRLP
Trigger: GGGCAGTCTCTGTCCCCGGCAGGATGGGCCCAGCCC...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGTGGGTGCGGACCTCCATGGTaGGCAGCCCACTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: RDSFGREGACPSSSPRCGCGPPW*AAHCSR
Trigger: ACGGGAGCAGTGGGCTGCCCACCATGGAGGTCCGCA...CCCACACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTGTGGTGCAGTGTGTaGCGGCCGCCACCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRLWCSV*RPPPRG
Trigger: CCCCCTGGGTGGCGGCCGCCACACACTGCACCACAG...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGGGCAGGGAGGAGCCGTaGGGTGTCCCTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRGREEP*GVPGWV
Trigger: CACCCACCCAGGGACACCCCACGGCTCCTCCCTGCC...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCCAGCTGCCGTCCACTaGGCACAGGGTGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRPAAVH*AQGGAG
Trigger: GCCTGCGCCACCCTGTGCCCAGTGGACGGCAGCTGG...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR TCA 90 bp AGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGTGGGGGACTCAGCAGGGTCTaGCAGCCAGCTAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: RDSFGREGACPSSSPRCGGLSRV*QPARGN
Trigger: GTTGCCCCTAGCTGGCTGTCAGACCCTGCTGAGTCC...CCCACACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CAGGCACTGTCCCTCCTGGGCCCTGGGGCCGAGTGTGAGTGGCAGTGCCAGCCTAGAAAGCGCCCCCGTTaGGAGGCGCCGGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: QALSLLGPGAECEWQCQPRKRPR*EAPGWC
Trigger: GCACCAACCCGGCGCCTCTCAACGGGGGCGCTTTCT...AGGCTGGCACTGCCACTCACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR CCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGTATGCCCAGGAGCGCTaGCCACAGGCCGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLYAQER*PQAGPD
Trigger: GTCCGGCCCGGCCTGTGGCCAGCGCTCCTGGGCATA...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGGGGCCCACCAGGGCTaGGACCCCCGCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPGAHQG*DPRFTL
Trigger: GAGAGTGAAGCGGGGGTCCCAGCCCTGGTGGGCCCC...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCAGCTCTCCCCGGTGTaGGGAAGGGCCCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGQLSPV*GRAPVR
Trigger: CCGGACAGGGGCCCTTCCCCACACCGGGGAGAGCTG...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CGTGTCAGCAAGGCGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTGATGTAGGCTCCGCCAGTGGGTaGAGTCCAGCCCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: RVSKAGLSHHQAVLPRDVGSASG*SPAHRP
Trigger: CGGCCTGTGGGCTGGACTGCACCCACTGGCGGAGCC...TACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCCTTGCTGACACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp AGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGTGGGCAGTCCAGCCACTGCTaGAGCCAGCTGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: RDSFGREGACPSSSPRCGQSSHC*SQLAEV
Trigger: AACCTCAGCCAGCTGGCTGCAGCAGTGGCTGGACTG...CCCACACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCTGGGTTGGCCACGGTaGCACTCTGCTGGGCACCCG +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGLGWPR*HSAGHP
Trigger: CGGGTGCCCAGCAGAGTGCCACCGTGGCCAACCCAG...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CAGGCACTGTCCCTCCTGGGCCCTGGGGCCGAGTGTGAGTGGCAGTGCCAGCCTAGGGATGCCCTCCGGTaGACGGCAGGGCAGCACGAT +
Preference number: 4 (lower is better)
Translates to: QALSLLGPGAECEWQCQPRDALR*TAGQHD
Trigger: ATCGTGCTGCCCTGCCGTCCACCGGAGGGCATCCCT...AGGCTGGCACTGCCACTCACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGAGGCACTGTCCCTCCTaGGCCCTGGGGCCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRRHCPS*ALGPSV
Trigger: CACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCT...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCTGCCTCTGGCACCTCCGCTaGGGCCGGGAGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EDPAVLLQTLPARQGGPCLWHLR*GRERLW
Trigger: CCAGAGCCTCTCCCGGCCCCAGCGGAGGTGCCAGAG...GCAGGGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTAGACGGCCACGGCGATaGGGCCCACATAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGRRPRR*GPHRGP
Trigger: TGGCCCTCTATGTGGGCCTCATCGCCGTGGCCGTCT...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CAGGCACTGTCCCTCCTGGGCCCTGGGGCCGAGTGTGAGTGGCAGTGCCAGCCTGGTCCGGCTGGATGGTaGGCAGATGGGGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: QALSLLGPGAECEWQCQPGPAGW*ADGGCL
Trigger: CAGACAACCCCCATCTGCTCACCATCCAGCCGGACC...AGGCTGGCACTGCCACTCACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CAGGCACTGTCCCTCCTGGGCCCTGGGGCCGAGTGTGAGTGGCAGTGCCAGCCTGGACTCAGCAGGGTCTaGCAGCCAGCTAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: QALSLLGPGAECEWQCQPGLSRV*QPARGN
Trigger: GTTGCCCCTAGCTGGCTGTCAGACCCTGCTGAGTCC...AGGCTGGCACTGCCACTCACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGACACGAGCTTCACATaGCAGGCCCCGCGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPDTSFT*QAPRGA
Trigger: TGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTC...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CAGGCACTGTCCCTCCTGGGCCCTGGGGCCGAGTGTGAGTGGCAGTGCCAGCCTCGTTCACGTAGACGATaGCAGCAGCGGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: QALSLLGPGAECEWQCQPRSRRR*QQRRRC
Trigger: GCAGCGCCTCCGCTGCTGTCATCGTCTACGTGAACG...AGGCTGGCACTGCCACTCACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR GCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGTGGTGGGCAGCCCACTaGTCCCGTCTGTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPWWAAH*SRLCCA
Trigger: AGCGCAGCACAGACGGGAGCAGTGGGCTGCCCACCA...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCTCGGCTGGAGGGATaGCCTCCGGTGGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: VARARVVVVCLNPGATPCPRLEG*PPVDGR
Trigger: CCTGCCGTCCACCGGAGGGCATCCCTCCAGCCGAGG...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTGGCTCCGCCAGTGGGTaGAGTCCAGCCCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: VARARVVVVCLNPGATPCGSASG*SPAHRP
Trigger: CGGCCTGTGGGCTGGACTGCACCCACTGGCGGAGCC...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGGGGTGTCCAGGTCAGTaGCCTGGCACTCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLGCPGQ*PGTPPL
Trigger: GAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCC...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGCCCCTGTCCGGCTTCTaGCTGTCCTTGGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLPLSGF*LSLVGA
Trigger: GGCACCCACCAAGGACAGGCAGAAGCCGGACAGGGG...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CAGGCACTGTCCCTCCTGGGCCCTGGGGCCGAGTGTGAGTGGCAGTGCCAGCCTGATAAAACCCCTATGTaGCCCGGCGGCCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: QALSLLGPGAECEWQCQPDKTPM*PGGRAR
Trigger: CCTTGCCCGGCCGCCGGGGCACATAGGGGTTTTATC...AGGCTGGCACTGCCACTCACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CAGGCACTGTCCCTCCTGGGCCCTGGGGCCGAGTGTGAGTGGCAGTGCCAGCCTGTTGGCACCAGGCACTaGGTTGGCCACGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: QALSLLGPGAECEWQCQPVGTRH*VGHGGT
Trigger: AGTGCCACCGTGGCCAACCCAGTGCCTGGTGCCAAC...AGGCTGGCACTGCCACTCACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCAGGGACACCTCCTTaGCCAGCGGCTCCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGPGTPP*PAAPAR
Trigger: TCGAGCAGGAGCCGCTGGCCAAGGAGGTGTCCCTGG...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTAGGGATGCCCTCCGGTaGACGGCAGGGCAGCACGAT +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGRDALR*TAGQHD
Trigger: ATCGTGCTGCCCTGCCGTCCACCGGAGGGCATCCCT...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCTGCGCTGGAACTTGGGGCTaGGCCCATCCTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: EDPAVLLQTLPARQGGPCAGTWG*AHPAGD
Trigger: GTCCCCGGCAGGATGGGCCCAGCCCCAAGTTCCAGC...GCAGGGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGAGGTGGGAGAGCTGTaGTGCAGTGTGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPEVGEL*CSVWRP
Trigger: CGGCCGCCACACACTGCACCACAGCTCTCCCACCTC...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGAAGAGGCCAGCGTCTaGCTGGCCCAGTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPEEASV*LAQSSH
Trigger: GTGGCTGGACTGGGCCAGCCAGACGCTGGCCTCTTC...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTTCGGTCCTGCAGGCTTaGAGCAGGGCCCCTCAGACG +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGSVLQA*SRAPQT
Trigger: CGTCTGAGGGGCCCTGCTCCAAGCCTGCAGGACCGA...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTGGGTGCCAAAGCTGGTaGGAGTGTAGGTGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGGCQSW*ECRCRA
Trigger: GGCCCGACACCTACACTCTCACCAGCTTTGGCACCC...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp AGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGTGGGGGAGAGGGCAGCATGTaGGAGGCAAATGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: RDSFGREGACPSSSPRCGGEGSM*EANVHQ
Trigger: TTGGTGCACATTTGCCTCTCACATGCTGCCCTCTCC...CCCACACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTTGGCGGGCACGGCCTTaGACACAAGCAGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGWRARP*TQAALA
Trigger: AGCCAGTGCTGCTTGTGTGCAAGGCCGTGCCCGCCA...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCGGCTGGAGGGATaGCCTCCGGTGGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRAPRLEG*PPVDGR
Trigger: CCTGCCGTCCACCGGAGGGCATCCCTCCAGCCGAGG...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CTGGTTTGGGGTCTTTGGTCTTTGGCGGCGTGGCGCCACTGCCGTGGTATCTGCCCTCGGCTGGAGGGATaGCCTCCGGTGGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: LVWGLWSLAAWRHCRGICPRLEG*PPVDGR
Trigger: CCTGCCGTCCACCGGAGGGCATCCCTCCAGCCGAGG...GCAGATACCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp CGTGTCAGCAAGGCGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTGATGTAGGCGCTGCGGCGACGTaGCACGATGTTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RVSKAGLSHHQAVLPRDVGAAAT*HDVLGH
Trigger: GTGGCCAAGAACATCGTGGCACGTCGCCGCAGCGCC...TACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCCTTGCTGACACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTCAGCAGCGGAGGCGCTaGGGCGACGTGCCACGATGT +
Preference number: 4 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCQQRRR*GDVPRC
Trigger: ACATCGTGGCACGTCGCCGCAGCGCCTCCGCTGCTG...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGCCCTCCGTTGCGGGGTaGTGGGTCAGAGCACTCACG +
Preference number: 4 (lower is better)
Translates to: ARVVVVCLNPGATPCPAVPSVAG*WVRALT
Trigger: CGTGAGTGCTCTGACCCAGCACCCCGCAACGGAGGG...CACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGAGGTCATGTTGCTGGTaGCTCGGGGCAGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPRSCCW*LGAGSG
Trigger: TCCGCTCCCTGCCCCGAGGCACCAGCAACATGACCT...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGGGCCCAGTGTGTGCGTaGATGGCCGTGTGTATGCGG +
Preference number: 4 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRGPVCA*MAVCMR
Trigger: CCGCATACACACGGCCATGCACGCACACACTGGGCC...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGAAGAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCGCGGCGTGGCGCCACTaGCGTGGTATCTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: RRGPCGSPADPPSKTRWAAAWRH*RGICRG
Trigger: CCCACGGCAGATACCACGGCAGTGGCGCCACGCCGC...GGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGCCCACAGCTGGCGCTaGAGACGGACCACTCGGTCC +
Preference number: 4 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCAHSWR*RRTTRS
Trigger: GGACCGAGTGGTCCGTCTGCAGCGCCAGCTGTGGGC...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR GCA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTCTCCGGCTCCGTTTCTaGCAGCCGCGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCLRLRF*QPRPQL
Trigger: CAGCTGTGGGCGCGGCTGGCAGAAACGGAGCCGGAG...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACTCCACGGGCTCCAGCTaGCGTCCACTGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYSTGSS*RPLGTG
Trigger: CCCTGTGCCCAGTGGACGGCAGCTGGAGCCCGTGGA...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR CCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGTATGCCCAGGAGCGCTaGCCACAGGCCGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLYAQER*PQAGPD
Trigger: GTCCGGCCCGGCCTGTGGCCAGCGCTCCTGGGCATA...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGGTTGGCACCAGGCACTaGGTTGGCCACGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLVGTRH*VGHGGT
Trigger: AGTGCCACCGTGGCCAACCCAGTGCCTGGTGCCAAC...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGGGCTCCACCAGGAAGTaGGGAAGCAGGTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRGSTRK*GSRSGL
Trigger: CAACCCGGACCTGCTTCCCCACTTCCTGGTGGAGCC...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTATCACGTGGTCCACCTaGCGCACCCACTCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGITWST*RTHSPL
Trigger: CAACGGGGAGTGGGTGCGCCAGGTGGACCACGTGAT...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp TACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCACTCCACCCACTCCACCTCGGCTaGAGGGATGCCCTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: YIGVQGRVHQVLVPEPLHPLHLG*RDALRW
Trigger: CCACCGGAGGGCATCCCTCCAGCCGAGGTGGAGTGG...GTGGAGTGGCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTTCCGTTGCGGGGTGCTaGGTCAGAGCACTCACGGCT +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGSVAGC*VRALTA
Trigger: AGCCGTGAGTGCTCTGACCCAGCACCCCGCAACGGA...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGTCCGTTGCGGGGTGCTaGGTCAGAGCACTCACGGCT +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLSVAGC*VRALTA
Trigger: AGCCGTGAGTGCTCTGACCCAGCACCCCGCAACGGA...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTGTGCTGAGGTCCGGCTaGATGGTGAGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGVLRSG*MVSRWG
Trigger: CCCCCATCTGCTCACCATCCAGCCGGACCTCAGCAC...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGCTGAGGTCCGGCTaGATGGTGAGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPVLRSG*MVSRWG
Trigger: CCCCCATCTGCTCACCATCCAGCCGGACCTCAGCAC...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGCATAGCCAGGATGACTaGCCGGGTGAGCAGGACGCC +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPHSQDD*PGEQDA
Trigger: GGCGTCCTGCTCACCCGGCCAGTCATCCTGGCTATG...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGACTGCTGCAGCCAGCTaGCTGAGGTTGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRTAAAS*LRLPLG
Trigger: CCCCAACGGCAACCTCAGCCAGCTGGCTGCAGCAGT...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACAGCTCTCCCCGGTGTaGGGAAGGGCCCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRAQLSPV*GRAPVR
Trigger: CCGGACAGGGGCCCTTCCCCACACCGGGGAGAGCTG...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTGTGGCAGTGCCAGCCTaGCTAGGCAGGCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGVAVPA*LGRPWR
Trigger: TCTCCATGGCCTGCCTAGCCAGGCTGGCACTGCCAC...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGGGCTGTGCTCCCGCGTaGTGTATACATTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRGCAPA*CIHWGP
Trigger: TGGACCCCAATGTATACATCACGCGGGAGCACAGCC...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCCCCTCCCGTCCACGTAGACGATaGCAGCAGCGGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VTGTVAGVQVSALALLPSRPRRR*QQRRRC
Trigger: GCAGCGCCTCCGCTGCTGTCATCGTCTACGTGGACG...GGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTAGACGGCCACGGCGATaGGGCCCACATAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCRRPRR*GPHRGP
Trigger: TGGCCCTCTATGTGGGCCTCATCGCCGTGGCCGTCT...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GTCTTTGGCGGCGTGGCGCCACTGCCGTGGTATCTGCCGTGGGTAAGGAAAGCCAGACGGCCACGGCGATaGGGCCCACATAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VFGGVAPLPWYLPWVRKARRPRR*GPHRGP
Trigger: TGGCCCTCTATGTGGGCCTCATCGCCGTGGCCGTCT...GGCTTTCCTTACCCACGGCAGATACCACGGCAGTGGCGCCACGCCGCCAAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGGACGGGCTGGAAGCCTaGGGTGAGAATGGACGAGTC +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLDGLEA*GENGRV
Trigger: GACTCGTCCATTCTCACCTCAGGCTTCCAGCCCGTC...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CGTGTCAGCAAGGCGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTGATGTAGCAGGTGCCCATTGGTaGGCTGGAACTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RVSKAGLSHHQAVLPRDVAGAHW*AGTWGW
Trigger: CCAGCCCCAAGTTCCAGCTCACCAATGGGCACCTGC...TACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCCTTGCTGACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp AGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGTGGGCCGGCTTGTGCAGCGTaGGGTAGATCTCATAGATCT +
Preference number: 4 (lower is better)
Translates to: RDSFGREGACPSSSPRCGPACAA*GRSHRS
Trigger: AGATCTATGAGATCTACCTCACGCTGCACAAGCCGG...CCCACACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCGCACGACTGCTTTTTaGGGCGCAGGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGRTTAF*GAGSSC
Trigger: ACAGCTGGAGCCTGCGCCTCAAAAAGCAGTCGTGCG...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCAAACAGAAGCAGCTTaGGGCGCTTGGCGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGQTEAA*GAWRQP
Trigger: TGGCTGCCGCCAAGCGCCTCAAGCTGCTTCTGTTTG...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGACTGGGCGTGAGACGTaGGCAGCCTCAGGTGTACAG +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPTGRET*AASGVQ
Trigger: CTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGT...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGAAGCGGCGAGGACTATaGCCAGGAGCGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ARVVVVCLNPGATPCPAVKRRGL*PGALAT
Trigger: TGTGGCCAGCGCTCCTGGGCATAGTCCTCGCCGCTT...CACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCGCCACGGTGGCACTCTaGTGGGCACCCGAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSATVAL*WAPEPR
Trigger: CCGCGGCTCGGGTGCCCAGCAGAGTGCCACCGTGGC...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGTGCTCCCGTCTGTGCTaGGCTCGATCACGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPCSRLC*ARSRGP
Trigger: TGGACCACGTGATCGAGCGCAGCACAGACGGGAGCA...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGCACTGCTCCCGTCTGTaGTGCGCTCGATCACGTGGT +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLHCSRL*CARSRG
Trigger: ACCACGTGATCGAGCGCAGCACAGACGGGAGCAGTG...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACGGCGCTGCGGCGACGTaGCACGATGTTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYGAAAT*HDVLGH
Trigger: GTGGCCAAGAACATCGTGGCACGTCGCCGCAGCGCC...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCCTCCGTTGCGGGGTaGTGGGTCAGAGCACTCACG +
Preference number: 4 (lower is better)
Translates to: VARARVVVVCLNPGATPCPSVAG*WVRALT
Trigger: CGTGAGTGCTCTGACCCAGCACCCCGCAACGGAGGG...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCAGGGCTGGGCCCATCCTaGCGGGGACAGAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPGLGPS*RGQRLP
Trigger: GGGCAGTCTCTGTCCCCGGCAGGATGGGCCCAGCCC...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGAGGGGGCTGAGCAGGTaGCCATTGGTGAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPRGLSR*PLVSWN
Trigger: GTTCCAGCTCACCAATGGGCACCTGCTCAGCCCCCT...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCTGCCCTCGCACGACTaGTTTTTGAGGCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGLPSHD*FLRRRL
Trigger: GAGCCTGCGCCTCAAAAAGCAGTCGTGCGAGGGCAG...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACAGGGCCCCTCAGACGTaGCCCTACCCAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYRAPQT*PYPAGT
Trigger: TGTGCCTGCTGGGTAGGGGCACGTCTGAGGGGCCCT...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCAACGGGAGCGCAGCAATaGAGCCGGGGCGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPTGAQQ*SRGGAQ
Trigger: CTGCGCTCCGCCCCGGCTGCATTGCTGCGCTCCCGT...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR CCA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGGGCGCGTGGCTCCCTTaGGCACGGGAGCGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQGAWLP*ARERSN
Trigger: ATTGCTGCGCTCCCGTGCCCAAGGGAGCCACGCGCC...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCTGCGTTGGCACCAGGCACTaGGTTGGCCACGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: EDPAVLLQTLPARQGGPCVGTRH*VGHGGT
Trigger: AGTGCCACCGTGGCCAACCCAGTGCCTGGTGCCAAC...GCAGGGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp TACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCACTCCACAGGGATGCCCTCCGGTaGACGGCAGGGCAGCACGAT +
Preference number: 4 (lower is better)
Translates to: YIGVQGRVHQVLVPEPLHRDALR*TAGQHD
Trigger: ATCGTGCTGCCCTGCCGTCCACCGGAGGGCATCCCT...GTGGAGTGGCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCTGCTCCAGGTCAGTGCCCTaGCACTCCTCCCCTCCGTTG +
Preference number: 4 (lower is better)
Translates to: EDPAVLLQTLPARQGGPCSRSVP*HSSPPL
Trigger: CAACGGAGGGGAGGAGTGCCAGGGCACTGACCTGGA...GCAGGGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp AGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGTGGGGTACACAGAGGTCACTaGTACAGTTGCGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RDSFGREGACPSSSPRCGVHRGH*YSCGCP
Trigger: TGGACACCCGCAACTGTACCAGTGACCTCTGTGTAC...CCCACACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGGCTGGAACTTGGGGCTaGGCCCATCCTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLAGTWG*AHPAGD
Trigger: GTCCCCGGCAGGATGGGCCCAGCCCCAAGTTCCAGC...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACGAGGTGGGAGAGCTGTaGTGCAGTGTGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYEVGEL*CSVWRP
Trigger: CGGCCGCCACACACTGCACCACAGCTCTCCCACCTC...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTTCCAGGTGGAGTTTCTaGGCCAGAGTCCGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGSRWSF*ARVRQS
Trigger: CGACTGGCGGACTCTGGCCCAGAAACTCCACCTGGA...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTTGTAGGTGTCGGGCCTaGCCGGCCTCAGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: VARARVVVVCLNPGATPCCRCRA*PASALS
Trigger: GCTGAGTGCTGAGGCCGGCCAGGCCCGACACCTACA...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAAGGCACTGTCCCTCCTaGGCCCTGGGGCCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRARHCPS*ALGPSV
Trigger: CACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCT...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGCAGATGGGCTGGGCCTaGCCCAGGCTCCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQQMGWA*PRLQAL
Trigger: CAGTGCCTGGAGCCTGGGCCAGGCCCAGCCCATCTG...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTTGTATGCGGGGCCCCTaGAGAGGGACGGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: VARARVVVVCLNPGATPCCMRGP*RGTGGE
Trigger: CTCTCCTCCCGTCCCTCTCCAGGGGCCCCGCATACA...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGCCCTGGCACTCCTCCCCTCCGTTGCGGGGTGCTGGGTCAGAGCACTCACGGTGCCCAGGGTTCTGTTaGGCTACATTGGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: VPWHSSPPLRGAGSEHSRCPGFC*ATLAAN
Trigger: GTTGGCGGCCAATGTAGCCCAACAGAACCCTGGGCA...CCGTGAGTGCTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTGCCAGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp TACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCACTCCACGGCCGGGAGAGGCTCTaGTCCTGGGAGGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: YIGVQGRVHQVLVPEPLHGRERL*SWEVLV
Trigger: CACCAACACCTCCCAGGACCAGAGCCTCTCCCGGCC...GTGGAGTGGCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCCCCTCCCCCAGCAAGACAAGGTaGGCCCTGCTGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VTGTVAGVQVSALALLPSPSKTR*ALLLGR
Trigger: CCTGCCCAGCAGCAGGGCCCACCTTGTCTTGCTGGG...GGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp AGAAGAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCCGGCCATGGGAGGCTaGAGTCGGATGCTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RRGPCGSPADPPSKTRWAPAMGG*SRMLGA
Trigger: TGCCCCGAGCATCCGACTCCAGCCTCCCATGGCCGG...GGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGAGCCGCGCCCACAGCTaGCGCTGCAGACGGACCACT +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLSRAHS*RCRRTT
Trigger: AGTGGTCCGTCTGCAGCGCCAGCTGTGGGCGCGGCT...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGCCACTGGGCACAGGGTaGCGCAGGCTGTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPPLGTG*RRLFSG
Trigger: TCCAGAAAACAGCCTGCGCCACCCTGTGCCCAGTGG...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR TCA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGGCTGGAAGCCTGAGGTaGGAATGGACGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRAGSLR*EWTSQP
Trigger: TGGCTGACTCGTCCATTCTCACCTCAGGCTTCCAGC...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGACGGGCTGGAAGCCTaGGGTGAGAATGGACGAGTC +
Preference number: 4 (lower is better)
Translates to: ARVVVVCLNPGATPCPAVDGLEA*GENGRV
Trigger: GACTCGTCCATTCTCACCTCAGGCTTCCAGCCCGTC...CACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CGTGTCAGCAAGGCGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTGATGTAGACGGGCTGGAAGCCTaGGGTGAGAATGGACGAGTC +
Preference number: 4 (lower is better)
Translates to: RVSKAGLSHHQAVLPRDVDGLEA*GENGRV
Trigger: GACTCGTCCATTCTCACCTCAGGCTTCCAGCCCGTC...TACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCCTTGCTGACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp GCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGCAAACAGAAGCAGCTTaGGGCGCTTGGCGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ARVVVVCLNPGATPCPAVQTEAA*GAWRQP
Trigger: TGGCTGCCGCCAAGCGCCTCAAGCTGCTTCTGTTTG...CACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGGCTGCACCACCTCCTTaGGTGCATCGTGGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLAAPPP*VHRGCH
Trigger: ATGACACCCACGATGCACTCAAGGAGGTGGTGCAGC...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACTGGTGGTCGTGTGCCTaGATCCAGGGGCTACCCCCT +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYWWSCA*IQGLPP
Trigger: AGGGGGTAGCCCCTGGATTCAGGCACACGACCACCA...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGAGGGGGCTGAGCAGGTaGCCATTGGTGAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: ARVVVVCLNPGATPCPAVRGLSR*PLVSWN
Trigger: GTTCCAGCTCACCAATGGGCACCTGCTCAGCCCCCT...CACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACAGGTCATGTTGCTGGTaGCTCGGGGCAGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYRSCCW*LGAGSG
Trigger: TCCGCTCCCTGCCCCGAGGCACCAGCAACATGACCT...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTGCACATCCTCCCAGCTaGCCTCGCACGACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGAHPPS*PRTTAF
Trigger: AAAAGCAGTCGTGCGAGGGCAGCTGGGAGGATGTGC...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAGCCTCCTCGCCCAGGTaGAGCACATCCTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRAASSPR*STSSQL
Trigger: CAGCTGGGAGGATGTGCTGCACCTGGGCGAGGAGGC...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTAGGGTGAAGGTGCAGTaGAAGTACCGCTGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGRVKVQ*KYRCVP
Trigger: TGGCACGCAGCGGTACTTGCACTGCACCTTCACCCT...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTTTGCCGTTGGGGAAGTaGCGCGCCTCCCACAGGTTG +
Preference number: 4 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCLPLGK*RASHRL
Trigger: CAACCTGTGGGAGGCGCGGCACTTCCCCAACGGCAA...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGCGTGTGGTGGTCGTGTaGCTGAATCCAGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: ARVVVVCLNPGATPCPAVRVVVV*LNPGAT
Trigger: GGTAGCCCCTGGATTCAGGCACACGACCACCACACG...CACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCATGCGTGGCACGTaGTCGTGTGGTGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCGMRGT*SCGGRV
Trigger: CACACGACCACCACACGAGCACGTGCCACGCATGCC...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCGAGGCGCCGGGTTGGTaGAGCTCCGGCTCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCEAPGW*SSGSVS
Trigger: AGAAACGGAGCCGGAGCTGCACCAACCCGGCGCCTC...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR CCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGTGCGGACCTCCATGGTaGGCAGCCCACTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLCGPPW*AAHCSR
Trigger: ACGGGAGCAGTGGGCTGCCCACCATGGAGGTCCGCA...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGCTCCATGCCACGCACTaGCACCAGTATTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPLHATH*HQYSSS
Trigger: GCTGGAGGAATACTGGTGCCAGTGCGTGGCATGGAG...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp TACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCACTCCACCCACGCAGGTGTAGTTaGCCGTGTCAGCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: YIGVQGRVHQVLVPEPLHPRRCS*PCQQGG
Trigger: CCCGCCTTGCTGACACGGCCAACTACACCTGCGTGG...GTGGAGTGGCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp CGTGTCAGCAAGGCGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTGATGTATGCCCATTGGTGAGCTaGAACTTGGGGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RVSKAGLSHHQAVLPRDVCPLVS*NLGLGP
Trigger: TGGGCCCAGCCCCAAGTTCCAGCTCACCAATGGGCA...TACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCCTTGCTGACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACACTGTGGTGCAGTGTGTaGCGGCCGCCACCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PLERDGRRGSITRTYTHTLWCSV*RPPPRG
Trigger: CCCCCTGGGTGGCGGCCGCCACACACTGCACCACAG...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGCTGGGCTCCCCACAGTaGTCCATAGCCAGGATGACT +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPLGSPQ*SIARMT
Trigger: AGTCATCCTGGCTATGGACCACTGTGGGGAGCCCAG...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGAGACGTAGCAGGCACTaGCCTCCAGCTGGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPRRSRH*PPAGSS
Trigger: ACTACTGCCAGCTGGAGGCCAGTGCCTGCTACGTCT...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGGAGCTGGGCACATCGTaGATGGATAGGCGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLELGTS*MDRRRL
Trigger: CAACCTGCGCCTATCCATCCACGATGTGCCCAGCTC...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGTCTGCCTGTCCTTGGTaGGTGCCAAAGCTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRSACPW*VPKLVR
Trigger: TCTCACCAGCTTTGGCACCCACCAAGGACAGGCAGA...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTGCTTCTGCCTGTCCTTaGTGGGTGCCAAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGASACP*WVPKLV
Trigger: CACCAGCTTTGGCACCCACCAAGGACAGGCAGAAGC...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCACAGATGGGCTGGGCCTaGCCCAGGCTCCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPQMGWA*PRLQAL
Trigger: CAGTGCCTGGAGCCTGGGCCAGGCCCAGCCCATCTG...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCATGTATGCGGGGCCCCTaGAGAGGGACGGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRACMRGP*RGTGGE
Trigger: CTCTCCTCCCGTCCCTCTCCAGGGGCCCCGCATACA...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR CAA 72 bp CGCACCACCAGGCTGTGCTCCCGCGTGATGTATACATaGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: RTTRLCSRVMYT*GSRDGSTRSSF
Trigger: GAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTATACATCACGCGGGAGCACAGCCTGGTGGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGCTCGACCTGCTGCCTTaGGACATTAATGCGGACCTC +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPLDLLP*DINADL
Trigger: GAGGTCCGCATTAATGTCTCAAGGCAGCAGGTCGAG...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGGGCAATAAACGAGGATaGGGACAAGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRGNKRG*GQAAAG
Trigger: TCCTGCTGCTGCTTGTCCTCATCCTCGTTTATTGCC...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAGGTCCGGCTGGATGGTaGGCAGATGGGGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRAGPAGW*ADGGCL
Trigger: CAGACAACCCCCATCTGCTCACCATCCAGCCGGACC...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAGCAGGTGCCCATTGGTaGGCTGGAACTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRAAGAHW*AGTWGW
Trigger: CCAGCCCCAAGTTCCAGCTCACCAATGGGCACCTGC...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGGCAGGTGCCCATTGGTaGGCTGGAACTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQAGAHW*AGTWGW
Trigger: CCAGCCCCAAGTTCCAGCTCACCAATGGGCACCTGC...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGGCCCCCGAGGAAGTTaGAGGTCCCATAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: ARVVVVCLNPGATPCPAVGPRGS*RSHRSC
Trigger: ACATGACCTATGGGACCTTCAACTTCCTCGGGGGCC...CACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGGGGTGCCAAAGCTGGTaGGAGTGTAGGTGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQGCQSW*ECRCRA
Trigger: GGCCCGACACCTACACTCTCACCAGCTTTGGCACCC...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGAAGCGGCGAGGACTATaGCCAGGAGCGCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLKRRGL*PGALAT
Trigger: TGTGGCCAGCGCTCCTGGGCATAGTCCTCGCCGCTT...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTGCCACGGTGGCACTCTaGTGGGCACCCGAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALATVAL*WAPEPR
Trigger: CCGCGGCTCGGGTGCCCAGCAGAGTGCCACCGTGGC...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp TACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCACTCCACCACTGCTCCCGTCTGTaGTGCGCTCGATCACGTGGT +
Preference number: 4 (lower is better)
Translates to: YIGVQGRVHQVLVPEPLHHCSRL*CARSRG
Trigger: ACCACGTGATCGAGCGCAGCACAGACGGGAGCAGTG...GTGGAGTGGCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGGGCAGCACGATGCCCTaGTCCAGGGACACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLGSTMP*SRDTSL
Trigger: CAAGGAGGTGTCCCTGGAGCAGGGCATCGTGCTGCC...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAGGCAGCACGATGCCCTaGTCCAGGGACACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRAGSTMP*SRDTSL
Trigger: CAAGGAGGTGTCCCTGGAGCAGGGCATCGTGCTGCC...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGATGTATACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCCCTCCGTTGCGGGGTaGTGGGTCAGAGCACTCACG +
Preference number: 4 (lower is better)
Translates to: VMYTLGSRDGSTRSSFRSPSVAG*WVRALT
Trigger: CGTGAGTGCTCTGACCCAGCACCCCGCAACGGAGGG...GCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTATACATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GTGCCCTGGCACTCCTCCCCTCCGTTGCGGGGTGCTGGGTCAGAGCACTCACGGCAGATGGGGGTTGTCTaGTTTGCTGGGCTTGATGCT +
Preference number: 4 (lower is better)
Translates to: VPWHSSPPLRGAGSEHSRQMGVV*FAGLDA
Trigger: AGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTG...CCGTGAGTGCTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTGCCAGGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACTCCCATAGGTCATGTTaGTGGTGCCTCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYSHRSC*WCLGAG
Trigger: CCCTGCCCCGAGGCACCAGCAACATGACCTATGGGA...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTCTGCCCTCGCACGACTaGTTTTTGAGGCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCLPSHD*FLRRRL
Trigger: GAGCCTGCGCCTCAAAAAGCAGTCGTGCGAGGGCAG...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGTGGGGCAAGTACCGCTGCGTaGCATTCCAGATGTGATAAA +
Preference number: 4 (lower is better)
Translates to: RDSFGREGACPSSSPRCGASTAA*HSRCDK
Trigger: TTTATCACATCTGGAATGGCACGCAGCGGTACTTGC...CCCACACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTTTGATGCTGAAGCTCTaGCCGTCGCCCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCLMLKL*PSPSTC
Trigger: GCAGGTGGAGGGCGACGGGCAGAGCTTCAGCATCAA...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCAGGCCCAGTGTGTaGGTGCATGGCCGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYPRPSV*VHGRVY
Trigger: ATACACACGGCCATGCACGCACACACTGGGCCTGGG...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTGCCTGGGACTCCCATTaGATATTCACAGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: VARARVVVVCLNPGATPCAWDSH*IFTGPA
Trigger: GGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGC...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGCACCAGGCACTGGGTTaGCCACGGTGGCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQHQALG*PRWHSA
Trigger: AGCAGAGTGCCACCGTGGCCAACCCAGTGCCTGGTG...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGGAAGCAGGTCCGGGTTaGCACCAGGCACTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLEAGPG*HQALGW
Trigger: CCAACCCAGTGCCTGGTGCCAACCCGGACCTGCTTC...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCACTGCGCTCGATCACGTaGTCCACCTGGCGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPLRSIT*STWRTH
Trigger: GTGGGTGCGCCAGGTGGACCACGTGATCGAGCGCAG...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCTGCCCTTCTGACTCTTGGTaGTGCCCGAGGAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: EDPAVLLQTLPARQGGPCPSDSW*CPRSSM
Trigger: CATGGAGCTCCTCGGGCACCACCAAGAGTCAGAAGG...GCAGGGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACACCACTCCACCTCGGCTaGAGGGATGCCCTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PLERDGRRGSITRTYTHTPLHLG*RDALRW
Trigger: CCACCGGAGGGCATCCCTCCAGCCGAGGTGGAGTGG...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGCCACGCAGGTGTAGTTaGCCGTGTCAGCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQPRRCS*PCQQGG
Trigger: CCCGCCTTGCTGACACGGCCAACTACACCTGCGTGG...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGAAGAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCGTGCTGAGGTCCGGCTaGATGGTGAGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: RRGPCGSPADPPSKTRWAVLRSG*MVSRWG
Trigger: CCCCCATCTGCTCACCATCCAGCCGGACCTCAGCAC...GGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCGGCCTCAGAGGTaGGAGAGCTGTGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRAPRPQR*ESCGAV
Trigger: CACTGCACCACAGCTCTCCCACCTCTGAGGCCGAGG...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCATAGGTCATGTTGCTaGTGCCTCGGGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYHRSCC*CLGAGS
Trigger: GCTCCCTGCCCCGAGGCACCAGCAACATGACCTATG...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGTCTTCCACAGGGAGCTaGGCACATCGTGGATGGATA +
Preference number: 4 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRSSTGS*AHRGWI
Trigger: TATCCATCCACGATGTGCCCAGCTCCCTGTGGAAGA...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTAGATGGCTGTCCAGGTaGAGTTTCTGGGCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGRWLSR*SFWARV
Trigger: GACTCTGGCCCAGAAACTCCACCTGGACAGCCATCT...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTTCTGCCTGTCCTTGGTaGGTGCCAAAGCTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGSACPW*VPKLVR
Trigger: TCTCACCAGCTTTGGCACCCACCAAGGACAGGCAGA...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACAGGCCATGGAGAGGTaGGAGTTCGGGCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRAQAMER*EFGQGL
Trigger: CAGACCCTGCCCGAACTCCCACCTCTCCATGGCCTG...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATCCCCCTGTCCGGCTGTaGCCCTCGGTCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYPPVRL*PSVLQA
Trigger: AGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGG...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCACACGAGGCATGCGTaGCACGTGCTCGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLHTRHA*HVLVWW
Trigger: CCACCACACGAGCACGTGCCACGCATGCCTCGTGTG...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACGTGTCCCTGGGTGGGTaGAGAGGGCAGCATGTGAGA +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYVSLGG*RGQHVR
Trigger: TCTCACATGCTGCCCTCTCCACCCACCCAGGGACAC...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCGGCAGGGAGGAGCCGTaGGGTGTCCCTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGGREEP*GVPGWV
Trigger: CACCCACCCAGGGACACCCCACGGCTCCTCCCTGCC...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCCCCTCCCAGATGTTCCGGCCATaGGAGGCTGGAGTCGGATGC +
Preference number: 4 (lower is better)
Translates to: VTGTVAGVQVSALALLPSQMFRP*EAGVGC
Trigger: GCATCCGACTCCAGCCTCCCATGGCCGGAACATCTG...GGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTGCACTGGCTTGTTCTTaGCGATGTACACATCCTCGG +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGALACS*RCTHPR
Trigger: CCGAGGATGTGTACATCGTCAAGAACAAGCCAGTGC...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACACGTCCACGTAGACGATaGCAGCAGCGGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PLERDGRRGSITRTYTHTRPRRR*QQRRRC
Trigger: GCAGCGCCTCCGCTGCTGTCATCGTCTACGTGGACG...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329542.9
CDS-3UTR TCA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGCCGGCTTGTGCAGCGTaGGGTAGATCTCATAGATCT +
Preference number: 4 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRPACAA*GRSHRS
Trigger: AGATCTATGAGATCTACCTCACGCTGCACAAGCCGG...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCGCACGACTGCTTTTTaGGGCGCAGGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLRTTAF*GAGSSC
Trigger: ACAGCTGGAGCCTGCGCCTCAAAAAGCAGTCGTGCG...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGTGTGGTAACTGTCCTTaGAGTGCAGGACCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: ARVVVVCLNPGATPCPAVCGNCP*SAGPVA
Trigger: AGCCACGGGTCCTGCACTTCAAGGACAGTTACCACA...CACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGGGATCTCCTGGTAGCTaGCAAGGAGCTTACTCTTCC +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLGSPGS*QGAYSS
Trigger: GGAAGAGTAAGCTCCTTGTCAGCTACCAGGAGATCC...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCACAGCCTCCGACACTGTaGAGAGGCCAGCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPQPPTL*RGQRLA
Trigger: AGCCAGACGCTGGCCTCTTCACAGTGTCGGAGGCTG...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTCCCTGGGGCCGAGTGTaGGTGGCAGTGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALPWGRV*VAVPAW
Trigger: CCAGGCTGGCACTGCCACTCACACTCGGCCCCAGGG...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCCCCTGGGGCCGAGTGTaGGTGGCAGTGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFPWGRV*VAVPAW
Trigger: CCAGGCTGGCACTGCCACTCACACTCGGCCCCAGGG...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGCTCAGGTGTACAGCATaGGATGTGTGTGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ARVVVVCLNPGATPCPAVLRCTA*DVCGWG
Trigger: CCCCCAACCACACACATCTCATGCTGTACACCTGAG...CACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCACACCAACACTGGGCGTaGGACGTGAGCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPHQHWA*DVSSLR
Trigger: CCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTG...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACAGACACGAGCTTCACATaGCAGGCCCCGCGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PLERDGRRGSITRTYTHTDTSFT*QAPRGA
Trigger: TGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTC...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCTGGTGGGCAGCCCACTaGTCCCGTCTGTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSWWAAH*SRLCCA
Trigger: AGCGCAGCACAGACGGGAGCAGTGGGCTGCCCACCA...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGTGCGCAAATAGGCTATaGGGATGTAGGCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRCANRL*GCRPSD
Trigger: GTCAGAAGGCCTACATCCGCATAGCCTATTTGCGCA...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CAGGCACTGTCCCTCCTGGGCCCTGGGGCCGAGTGTGAGTGGCAGTGCCAGCCTTGCGCAAATAGGCTATaGGGATGTAGGCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: QALSLLGPGAECEWQCQPCANRL*GCRPSD
Trigger: GTCAGAAGGCCTACATCCGCATAGCCTATTTGCGCA...AGGCTGGCACTGCCACTCACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGTCCCATAGGTCATGTTaGTGGTGCCTCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQSHRSC*WCLGAG
Trigger: CCCTGCCCCGAGGCACCAGCAACATGACCTATGGGA...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACAGCCTCCTCGCCCAGGTaGAGCACATCCTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PLERDGRRGSITRTYTHTASSPR*STSSQL
Trigger: CAGCTGGGAGGATGTGCTGCACCTGGGCGAGGAGGC...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCATGTACTCGAGGGAGGTaGAGGCCACCGGCGCAAACA +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRACTRGR*RPPAQT
Trigger: TGTTTGCGCCGGTGGCCTGCACCTCCCTCGAGTACA...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCATTGATGCTGAAGCTCTaGCCGTCGCCCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRALMLKL*PSPSTC
Trigger: GCAGGTGGAGGGCGACGGGCAGAGCTTCAGCATCAA...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCACGGTGGCACTCTGCTaGGCACCCGAGCCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFTVALC*APEPRS
Trigger: GCTCCGCGGCTCGGGTGCCCAGCAGAGTGCCACCGT...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AACGTTTCTGGTTTGGGGTCTTTGGTCTTTGGCGGCGTGGCGCCACTGCCGTGGCACCAGGCACTGGGTTaGCCACGGTGGCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: NVSGLGSLVFGGVAPLPWHQALG*PRWHSA
Trigger: AGCAGAGTGCCACCGTGGCCAACCCAGTGCCTGGTG...CCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GTGATGTATACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCGGCTCCACCAGGAAGTaGGGAAGCAGGTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: VMYTLGSRDGSTRSSFRSGSTRK*GSRSGL
Trigger: CAACCCGGACCTGCTTCCCCACTTCCTGGTGGAGCC...GCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTATACATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GGGCCAGAAGCAGTGTGTACACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGCTGCGCTCGATCACGTaGTCCACCTGGCGCACCCAC +
Preference number: 4 (lower is better)
Translates to: GPEAVCTQRSLVQLRVSRLRSIT*STWRTH
Trigger: GTGGGTGCGCCAGGTGGACCACGTGATCGAGCGCAG...CCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACACTGCTTCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCTTCTGACTCTTGGTaGTGCCCGAGGAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYPSDSW*CPRSSM
Trigger: CATGGAGCTCCTCGGGCACCACCAAGAGTCAGAAGG...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGACGGGCTGGAAGCCTGAGCCAGGGACACCTCCTTaGCCAGCGGCTCCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: RWGLSALLGLMLTGWKPEPGTPP*PAAPAR
Trigger: TCGAGCAGGAGCCGCTGGCCAAGGAGGTGTCCCTGG...CTCAGGCTTCCAGCCCGTCAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCCCACTCCACCTCGGCTaGAGGGATGCCCTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGPLHLG*RDALRW
Trigger: CCACCGGAGGGCATCCCTCCAGCCGAGGTGGAGTGG...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTTCGGGGTATGGCATCTaGGGGGATGAGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: VARARVVVVCLNPGATPCSGYGI*GDEEAD
Trigger: ATCAGCCTCCTCATCCCCCCAGATGCCATACCCCGA...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGGAAGTGCAGGACCCGTaGCTCCTGGATCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLEVQDP*LLDQLS
Trigger: GGACAGCTGATCCAGGAGCCACGGGTCCTGCACTTC...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCTCCAGGTGGAGTTTCTaGGCCAGAGTCCGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCSRWSF*ARVRQS
Trigger: CGACTGGCGGACTCTGGCCCAGAAACTCCACCTGGA...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAATACACACACACAGATaGGCTGGGCCTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRAIHTHR*AGPGPG
Trigger: GCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTAT...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTCCCCCTGTCCGGCTGTaGCCCTCGGTCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALPPVRL*PSVLQA
Trigger: AGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGG...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AACGTTTCTGGTTTGGGGTCTTTGGTCTTTGGCGGCGTGGCGCCACTGCCGTGGGTGGCGCCACTGCCGTaGTATCTGCCGTGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: NVSGLGSLVFGGVAPLPWVAPLP*YLPWVR
Trigger: CCTTACCCACGGCAGATACCACGGCAGTGGCGCCAC...CCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GTGATGTATACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCTGGTCTTTGGCGGCGTaGCGCCACTGCCGTGGTATC +
Preference number: 4 (lower is better)
Translates to: VMYTLGSRDGSTRSSFRSWSLAA*RHCRGI
Trigger: GATACCACGGCAGTGGCGCCACGCCGCCAAAGACCA...GCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTATACATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp AGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGACGGGCTGGAAGCCTGAGGGGGTCTTTGGTCTTTaGCGGCGTGGCGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: RWGLSALLGLMLTGWKPEGVFGL*RRGATA
Trigger: GGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCC...CTCAGGCTTCCAGCCCGTCAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CAA 72 bp TGTGGGGAAGGGCCCCTGTCCGGCTTCTGCCTGTCCTaGGTGGGTGCCAAAGCTGGTGAGAGTGTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: CGEGPLSGFCLS*VGAKAGESVGV
Trigger: GACACCTACACTCTCACCAGCTTTGGCACCCACCAAGGACAGGCAGAAGCCGGACAGGGGCCCTTCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCGGCCCCCGAGGAAGTTaGAGGTCCCATAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCGPRGS*RSHRSC
Trigger: ACATGACCTATGGGACCTTCAACTTCCTCGGGGGCC...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTAGTTCGGGCAGGGTCTaGAGGACCAGCATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCSSGRV*RTSIKG
Trigger: TCCCTTAATGCTGGTCCTTCAGACCCTGCCCGAACT...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCTGGTGGTCGTGTGCCTaGATCCAGGGGCTACCCCCT +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSWWSCA*IQGLPP
Trigger: AGGGGGTAGCCCCTGGATTCAGGCACACGACCACCA...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCAGGGGTGTGTGTGAGATaGGCACACGAGGCATGCGTG +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPGVCVR*AHEACV
Trigger: CACGCATGCCTCGTGTGCTCATCTCACACACACCCC...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCACACTGCTCCCGTCTGTaGTGCGCTCGATCACGTGGT +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPHCSRL*CARSRG
Trigger: ACCACGTGATCGAGCGCAGCACAGACGGGAGCAGTG...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGCCTGCTCGAAGTTCTTaGGCAAATAGGCTATGCGGA +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPPARSS*ANRLCG
Trigger: TCCGCATAGCCTATTTGCGCAAGAACTTCGAGCAGG...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp TGGAAGCCTGAGGTGAGAATGGACGAGTCAGCCACATCTGAGTCCAGCCCCTCCGGCAGCACGATGCCCTaGTCCAGGGACACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WKPEVRMDESATSESSPSGSTMP*SRDTSL
Trigger: CAAGGAGGTGTCCCTGGAGCAGGGCATCGTGCTGCC...GGAGGGGCTGGACTCAGATGTGGCTGACTCGTCCATTCTCACCTCAGGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACGCACCACCAGGCTGTaGTCCCGCGTGATGTATACA +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRARTTRL*SRVMYT
Trigger: TGTATACATCACGCGGGAGCACAGCCTGGTGGTGCG...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTCAGCAGCGGAGGCGCTaGGGCGACGTGCCACGATGT +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALQQRRR*GDVPRC
Trigger: ACATCGTGGCACGTCGCCGCAGCGCCTCCGCTGCTG...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCGGTCACTGGTACAGTTaGGGGTGTCCAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCGHWYS*GCPGQC
Trigger: GCACTGACCTGGACACCCGCAACTGTACCAGTGACC...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCGCACATCCTCCCAGCTaGCCTCGCACGACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCAHPPS*PRTTAF
Trigger: AAAAGCAGTCGTGCGAGGGCAGCTGGGAGGATGTGC...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTAGCTGCTTCTCCAGCTaGACCACCTCCTTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: VARARVVVVCLNPGATPCSCFSS*TTSLSA
Trigger: TGCACTCAAGGAGGTGGTGCAGCTGGAGAAGCAGCT...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACAGGCCCAGTGTGTGCGTaGATGGCCGTGTGTATGCGG +
Preference number: 4 (lower is better)
Translates to: PLERDGRRGSITRTYTHTGPVCA*MAVCMR
Trigger: CCGCATACACACGGCCATGCACGCACACACTGGGCC...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCTGTGGCCCTCGGTCCTaGAGGCTTGGAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLCGPRS*RLGAGP
Trigger: GGGCCCTGCTCCAAGCCTGCAGGACCGAGGGCCACA...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGTGGGAAGGCCAAGAGTAAGTaGGTGAATGCACTTAAGACA +
Preference number: 4 (lower is better)
Translates to: RDSFGREGACPSSSPRCGKAKSK*VNALKT
Trigger: TGTCTTAAGTGCATTCACGCACTTACTCTTGGCCTT...CCCACACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCGGCGCGTGGCTCCCTTaGGCACGGGAGCGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFGAWLP*ARERSN
Trigger: ATTGCTGCGCTCCCGTGCCCAAGGGAGCCACGCGCC...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGACGGGCTGGAAGCCTGAGGAAGCAGGTCCGGGTTaGCACCAGGCACTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RWGLSALLGLMLTGWKPEEAGPG*HQALGW
Trigger: CCAACCCAGTGCCTGGTGCCAACCCGGACCTGCTTC...CTCAGGCTTCCAGCCCGTCAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACAGGCTCCACCAGGAAGTaGGGAAGCAGGTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: PLERDGRRGSITRTYTHTGSTRK*GSRSGL
Trigger: CAACCCGGACCTGCTTCCCCACTTCCTGGTGGAGCC...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCCTGCGCTCGATCACGTaGTCCACCTGGCGCACCCAC +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGLRSIT*STWRTH
Trigger: GTGGGTGCGCCAGGTGGACCACGTGATCGAGCGCAG...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACACCACGCAGGTGTAGTTaGCCGTGTCAGCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PLERDGRRGSITRTYTHTPRRCS*PCQQGG
Trigger: CCCGCCTTGCTGACACGGCCAACTACACCTGCGTGG...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCGCTGGAACTTGGGGCTaGGCCCATCCTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLAGTWG*AHPAGD
Trigger: GTCCCCGGCAGGATGGGCCCAGCCCCAAGTTCCAGC...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACACCCCGCCTACAGGGTaGGTCCAGGCTGGAAATTAT +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYTPPTG*VQAGNY
Trigger: ATAATTTCCAGCCTGGACCCACCCTGTAGGCGGGGT...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGGCAAAGAAGCTGAGATaGCTGTCCAGGTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLAKKLR*LSRWSF
Trigger: GAAACTCCACCTGGACAGCCATCTCAGCTTCTTTGC...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCTGGCTAGGCAGGCCATaGAGAGGTGGGAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSWLGRP*RGGSSG
Trigger: GCCCGAACTCCCACCTCTCCATGGCCTGCCTAGCCA...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCGGTCCTGCAGGCTTaGAGCAGGGCCCCTCAGACG +
Preference number: 4 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYSVLQA*SRAPQT
Trigger: CGTCTGAGGGGCCCTGCTCCAAGCCTGCAGGACCGA...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGCACCACTGTACAGCCTaGGACTCCCATTGCATATTC +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPHHCTA*DSHCIF
Trigger: GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTG...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGACGGGCTGGAAGCCTGAGTGCGGACCTCCATGGTaGGCAGCCCTGTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: RWGLSALLGLMLTGWKPECGPPW*AALSDH
Trigger: GTGGTCAGACAGGGCTGCCCACCATGGAGGTCCGCA...CTCAGGCTTCCAGCCCGTCAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCCTCGACCTGCTGCCTTaGGACATTAATGCGGACCTC +
Preference number: 4 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCLDLLP*DINADL
Trigger: GAGGTCCGCATTAATGTCTCAAGGCAGCAGGTCGAG...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCAGGCTGTGCTCCCGCGTaGTGTATACATTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPGCAPA*CIHWGP
Trigger: TGGACCCCAATGTATACATCACGCGGGAGCACAGCC...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCCCCTCCGGCAATAAACGAGGATaGGGACAAGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VTGTVAGVQVSALALLPSGNKRG*GQAAAG
Trigger: TCCTGCTGCTGCTTGTCCTCATCCTCGTTTATTGCC...GGAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCAGCTGGAAGCCTGAGGTaGGAATGGACGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPAGSLR*EWTSQP
Trigger: TGGCTGACTCGTCCATTCTCACCTCAGGCTTCCAGC...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCATGTGGTAACTGTCCTTaGAGTGCAGGACCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRACGNCP*SAGPVA
Trigger: AGCCACGGGTCCTGCACTTCAAGGACAGTTACCACA...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCCAGCCTCCGACACTGTaGAGAGGCCAGCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGQPPTL*RGQRLA
Trigger: AGCCAGACGCTGGCCTCTTCACAGTGTCGGAGGCTG...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAAGTTCGGGCAGGGTCTaGAGGACCAGCATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRASSGRV*RTSIKG
Trigger: TCCCTTAATGCTGGTCCTTCAGACCCTGCCCGAACT...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCGGGGTGTGTGTGAGATaGGCACACGAGGCATGCGTG +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSGVCVR*AHEACV
Trigger: CACGCATGCCTCGTGTGCTCATCTCACACACACCCC...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCTGCTCCCGTCTGTGCTaGGCTCGATCACGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSCSRLC*ARSRGP
Trigger: TGGACCACGTGATCGAGCGCAGCACAGACGGGAGCA...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCTGCACCTTCTCGACCTGCTaGCTTGAGACATTAATGCGG +
Preference number: 4 (lower is better)
Translates to: EDPAVLLQTLPARQGGPCTFSTC*LETLMR
Trigger: CCGCATTAATGTCTCAAGGCAGCAGGTCGAGAAGGT...GCAGGGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCGGCGCTGCGGCGACGTaGCACGATGTTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLGAAAT*HDVLGH
Trigger: GTGGCCAAGAACATCGTGGCACGTCGCCGCAGCGCC...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCGGGTGTCCAGGTCAGTaGCCTGGCACTCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFGCPGQ*PGTPPL
Trigger: GAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCC...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CAGCCCTGTCTGACCACAGAACGTTTCTGGTTTGGGGTCTTTGGTCTTTGGCGGGGGTGTCCAGGTCAGTaGCCTGGCACTCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QPCLTTERFWFGVFGLWRGCPGQ*PGTPPL
Trigger: GAGGGGAGGAGTGCCAGGGCACTGACCTGGACACCC...CCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTCAGACAGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp TCCGGCTGGATGGTGAGCAGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGAGGGGGCTGAGCAGGTaGCCATTGGTGAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SGWMVSRWGLSALLGLMLRGLSR*PLVSWN
Trigger: GTTCCAGCTCACCAATGGGCACCTGCTCAGCCCCCT...CAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTGCTCACCATCCAGCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAAGCTGCTTCTCCAGCTaGACCACCTCCTTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRASCFSS*TTSLSA
Trigger: TGCACTCAAGGAGGTGGTGCAGCTGGAGAAGCAGCT...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGGCAAGTACCGCTGCGTaGCATTCCAGATGTGATAAA +
Preference number: 4 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRASTAA*HSRCDK
Trigger: TTTATCACATCTGGAATGGCACGCAGCGGTACTTGC...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCCCCCTGTCCGGCTTCTaGCTGTCCTTGGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFPLSGF*LSLVGA
Trigger: GGCACCCACCAAGGACAGGCAGAAGCCGGACAGGGG...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCCCCAGGCCCAGTGTGTaGGTGCATGGCCGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSPRPSV*VHGRVY
Trigger: ATACACACGGCCATGCACGCACACACTGGGCCTGGG...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGAGGCACAGAAATGTTTaGATAAGGTCCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPRHRNV*IRSSSG
Trigger: GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCT...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTAGGGCCCCTCAGACGTaGCCCTACCCAGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALRAPQT*PYPAGT
Trigger: TGTGCCTGCTGGGTAGGGGCACGTCTGAGGGGCCCT...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AACGTTTCTGGTTTGGGGTCTTTGGTCTTTGGCGGCGTGGCGCCACTGCCGTGGCTCTATCTCCCTCACTaGTCCCGTCTGTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: NVSGLGSLVFGGVAPLPWLYLPH*SRLCCA
Trigger: AGCGCAGCACAGACGGGAGCAGTGAGGGAGATAGAG...CCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp CGTGGCGCCACTGCCGTGGTATCTGCCGTGGGTAAGGAAAGCCTTTTTCTTCACGAGGCTGGAGTCGGATaGTCGGGGCAGAAGAGGACC +
Preference number: 4 (lower is better)
Translates to: RGATAVVSAVGKESLFLHEAGVG*SGQKRT
Trigger: GGTCCTCTTCTGCCCCGAGCATCCGACTCCAGCCTC...GTGAAGAAAAAGGCTTTCCTTACCCACGGCAGATACCACGGCAGTGGCGCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTGTTTTCTGGACATTCTaGCCCTCACAGAAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: VARARVVVVCLNPGATPCVFWTF*PSQKAP
Trigger: GGGCGCTTTCTGTGAGGGGCAGAATGTCCAGAAAAC...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR CCA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATGAAGCAGGTCCGGGTTaGCACCAGGCACTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYEAGPG*HQALGW
Trigger: CCAACCCAGTGCCTGGTGCCAACCCGGACCTGCTTC...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGGCACACAAGCAGCACTaGCTTGTTCTTGACGATGTA +
Preference number: 4 (lower is better)
Translates to: LNPGATPCPAVALGPAGLAHKQH*LVLDDV
Trigger: TACATCGTCAAGAACAAGCCAGTGCTGCTTGTGTGC...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AACGTTTCTGGTTTGGGGTCTTTGGTCTTTGGCGGCGTGGCGCCACTGCCGTGGCTCCATGCCACGCACTaGCACCAGTATTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NVSGLGSLVFGGVAPLPWLHATH*HQYSSS
Trigger: GCTGGAGGAATACTGGTGCCAGTGCGTGGCATGGAG...CCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTCCAGGGACACCTCCTTaGCCAGCGGCTCCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALPGTPP*PAAPAR
Trigger: TCGAGCAGGAGCCGCTGGCCAAGGAGGTGTCCCTGG...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCTCCAGGTCAGTGCCCTaGCACTCCTCCCCTCCGTTG +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGSRSVP*HSSPPL
Trigger: CAACGGAGGGGAGGAGTGCCAGGGCACTGACCTGGA...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTTTGATGCTGACGGGCTaGAAGCCTGAGGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCLMLTG*KPEVRM
Trigger: CATTCTCACCTCAGGCTTCCAGCCCGTCAGCATCAA...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCTGCCCATTGGTGAGCTaGAACTTGGGGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSCPLVS*NLGLGP
Trigger: TGGGCCCAGCCCCAAGTTCCAGCTCACCAATGGGCA...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGGGAAGTAGTTCTGGGTaGAGAGGCGGGAGACGAACT +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLGSSSG*RGGRRT
Trigger: AGTTCGTCTCCCGCCTCTCCACCCAGAACTACTTCC...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACACATAGGTCATGTTGCTaGTGCCTCGGGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLERDGRRGSITRTYTHTHRSCC*CLGAGS
Trigger: GCTCCCTGCCCCGAGGCACCAGCAACATGACCTATG...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCCAGCTGTCAGGGCTaGGCTCCCCACAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYSSCQG*APHSGP
Trigger: TGGACCACTGTGGGGAGCCCAGCCCTGACAGCTGGA...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAACCCCGCCTACAGGGTaGGTCCAGGCTGGAAATTAT +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRATPPTG*VQAGNY
Trigger: ATAATTTCCAGCCTGGACCCACCCTGTAGGCGGGGT...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCACTGCTGCAGCCAGCTaGCTGAGGTTGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGTAAAS*LRLPLG
Trigger: CCCCAACGGCAACCTCAGCCAGCTGGCTGCAGCAGT...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTGAAGAGGCCAGCGTCTaGCTGGCCCAGTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALEEASV*LAQSSH
Trigger: GTGGCTGGACTGGGCCAGCCAGACGCTGGCCTCTTC...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCTGTAGGTGTCGGGCCTaGCCGGCCTCAGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFCRCRA*PASALS
Trigger: GCTGAGTGCTGAGGCCGGCCAGGCCCGACACCTACA...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCGTGGCAGTGCCAGCCTaGCTAGGCAGGCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGVAVPA*LGRPWR
Trigger: TCTCCATGGCCTGCCTAGCCAGGCTGGCACTGCCAC...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp TCCGGCTGGATGGTGAGCAGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGCTGGTTTGGGGTCTTTaGTCTTTGGCGGCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SGWMVSRWGLSALLGLMLLVWGL*SLAAWR
Trigger: GCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAG...CAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTGCTCACCATCCAGCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
3UTR CAA 72 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTaGCATAAGGTCCAGCTCAGGCAGGAGCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKC*HKVQLRQELWG
Trigger: GCCCCAGAGCTCCTGCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
3UTR CAA 72 bp GACCACAGAACGTTTCTGGTTTGGGGTCTTTGGTCTTaGGCGGCGTGGCGCCACTGCCGTGGTATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: DHRTFLVWGLWS*AAWRHCRGICR
Trigger: ACGGCAGATACCACGGCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp TCCGGCTGGATGGTGAGCAGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGGGCTGTGCTCCCGCGTaGTGTATACATTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SGWMVSRWGLSALLGLMLGCAPA*CIHWGP
Trigger: TGGACCCCAATGTATACATCACGCGGGAGCACAGCC...CAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTGCTCACCATCCAGCCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCACTCAGGTGTACAGCATaGGATGTGTGTGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPLRCTA*DVCGWG
Trigger: CCCCCAACCACACACATCTCATGCTGTACACCTGAG...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCCACCAACACTGGGCGTaGGACGTGAGCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLHQHWA*DVSSLR
Trigger: CCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTG...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GGGCCAGAAGCAGTGTGTACACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGGTGGGCAGCCCTGTCTaGCCACAGAACGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GPEAVCTQRSLVQLRVSRVGSPV*PQNVSG
Trigger: ACCAGAAACGTTCTGTGGTCAGACAGGGCTGCCCAC...CCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACACTGCTTCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCCACTTGAAGAAGATCTaGGTGGCGGGCACGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSHLKKI*VAGTAL
Trigger: CAAGGCCGTGCCCGCCACGCAGATCTTCTTCAAGTG...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACACCTTCTCGACCTGCTaGCTTGAGACATTAATGCGG +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYTFSTC*LETLMR
Trigger: CCGCATTAATGTCTCAAGGCAGCAGGTCGAGAAGGT...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTAACACCTTCTCGACCTaGTGCCTTGAGACATTAATG +
Preference number: 4 (lower is better)
Translates to: VVVCLNPGATPCPAVALGNTFST*CLETLM
Trigger: CATTAATGTCTCAAGGCAGCAGGTCGAGAAGGTGTT...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCGGTCACTGGTACAGTTaGGGGTGTCCAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSGHWYS*GCPGQC
Trigger: GCACTGACCTGGACACCCGCAACTGTACCAGTGACC...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp AGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGACGGGCTGGAAGCCTGAGGGTCACTGGTACAGTTaGGGGTGTCCAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: RWGLSALLGLMLTGWKPEGHWYS*GCPGQC
Trigger: GCACTGACCTGGACACCCGCAACTGTACCAGTGACC...CTCAGGCTTCCAGCCCGTCAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCAGATGGGGGTTGTCTaGTTTGCTGGGCTTGATGCT +
Preference number: 4 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLQMGVV*FAGLDA
Trigger: AGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTG...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GAGAAATCGATGAGATCAATGAACGTTCAGATGTTCCGGCCATGGGAGGCTGGAGGGCTGGGCCCATCCTaGCGGGGACAGAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: EKSMRSMNVQMFRPWEAGGLGPS*RGQRLP
Trigger: GGGCAGTCTCTGTCCCCGGCAGGATGGGCCCAGCCC...TCCAGCCTCCCATGGCCGGAACATCTGAACGTTCATTGATCTCATCGATTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCTTGCCGTTGGGGAAGTaGCGCGCCTCCCACAGGTTG +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFLPLGK*RASHRL
Trigger: CAACCTGTGGGAGGCGCGGCACTTCCCCAACGGCAA...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCGGCATGCGTGGCACGTaGTCGTGTGGTGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFGMRGT*SCGGRV
Trigger: CACACGACCACCACACGAGCACGTGCCACGCATGCC...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCATGTGAGAGGCAAATGTaGACCAACACTGGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRACERQM*TNTGRE
Trigger: CTCACGCCCAGTGTTGGTGCACATTTGCCTCTCACA...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCGCCTGGGACTCCCATTaGATATTCACAGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGAWDSH*IFTGPA
Trigger: GGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGC...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTGATAAAACCCCTATGTaGCCCGGCGGCCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALDKTPM*PGGRAR
Trigger: CCTTGCCCGGCCGCCGGGGCACATAGGGGTTTTATC...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCCACCAGGCACTGGGTTaGCCACGGTGGCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLHQALG*PRWHSA
Trigger: AGCAGAGTGCCACCGTGGCCAACCCAGTGCCTGGTG...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCATCACGTGGTCCACCTaGCGCACCCACTCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLITWST*RTHSPL
Trigger: CAACGGGGAGTGGGTGCGCCAGGTGGACCACGTGAT...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCCTCCATGCCACGCACTaGCACCAGTATTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSLHATH*HQYSSS
Trigger: GCTGGAGGAATACTGGTGCCAGTGCGTGGCATGGAG...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCTCCAGGTCAGTGCCCTaGCACTCCTCCCCTCCGTTG +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLSRSVP*HSSPPL
Trigger: CAACGGAGGGGAGGAGTGCCAGGGCACTGACCTGGA...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCGTACACAGAGGTCACTaGTACAGTTGCGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCVHRGH*YSCGCP
Trigger: TGGACACCCGCAACTGTACCAGTGACCTCTGTGTAC...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCTGCCCATTGGTGAGCTaGAACTTGGGGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGCPLVS*NLGLGP
Trigger: TGGGCCCAGCCCCAAGTTCCAGCTCACCAATGGGCA...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCCCTCGGCCTCAGAGGTaGGAGAGCTGTGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLPRPQR*ESCGAV
Trigger: CACTGCACCACAGCTCTCCCACCTCTGAGGCCGAGG...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCAGGAAGTAGTTCTGGGTaGAGAGGCGGGAGACGAACT +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPGSSSG*RGGRRT
Trigger: AGTTCGTCTCCCGCCTCTCCACCCAGAACTACTTCC...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTCATAGCCAGGATGACTaGCCGGGTGAGCAGGACGCC +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALHSQDD*PGEQDA
Trigger: GGCGTCCTGCTCACCCGGCCAGTCATCCTGGCTATG...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCTCCAGCTGTCAGGGCTaGGCTCCCCACAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLSSCQG*APHSGP
Trigger: TGGACCACTGTGGGGAGCCCAGCCCTGACAGCTGGA...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCGAAGTGCAGGACCCGTaGCTCCTGGATCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGEVQDP*LLDQLS
Trigger: GGACAGCTGATCCAGGAGCCACGGGTCCTGCACTTC...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCATCTTCCACAGGGAGCTaGGCACATCGTGGATGGATA +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRASSTGS*AHRGWI
Trigger: TATCCATCCACGATGTGCCCAGCTCCCTGTGGAAGA...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACAGGGTGGGTCCAGGCTaGAAATTATCTTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYRVGPG*KLSSAE
Trigger: TTCGGCAGAAGATAATTTCCAGCCTGGACCCACCCT...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCATGCGTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACGCAAAGAAGCTGAGATaGCTGTCCAGGTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GMRGTCSCGGRVPESRGYAKKLR*LSRWSF
Trigger: GAAACTCCACCTGGACAGCCATCTCAGCTTCTTTGC...GTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCACGCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCTGGCTAGGCAGGCCATaGAGAGGTGGGAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFWLGRP*RGGSSG
Trigger: GCCCGAACTCCCACCTCTCCATGGCCTGCCTAGCCA...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATATACACACACACAGATaGGCTGGGCCTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYIHTHR*AGPGPG
Trigger: GCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTAT...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTCACACGAGGCATGCGTaGCACGTGCTCGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALHTRHA*HVLVWW
Trigger: CCACCACACGAGCACGTGCCACGCATGCCTCGTGTG...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp TGTTCCGGCCATGGGAGGCTGGAGTCGGATGCTCGGGGCAGAAGAGGACCCTGCCCTCAAAGCACTCGATaGCTTTGGGTTGAGAAATCG +
Preference number: 4 (lower is better)
Translates to: CSGHGRLESDARGRRGPCPQSTR*LWVEKS
Trigger: CGATTTCTCAACCCAAAGCCATCGAGTGCTTTGAGG...GCAGGGTCCTCTTCTGCCCCGAGCATCCGACTCCAGCCTCCCATGGCCGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCTGCAGAACGTTTCTGGTTTaGGGTCTTTGGTCTTTGGCG +
Preference number: 4 (lower is better)
Translates to: EDPAVLLQTLPARQGGPCRTFLV*GLWSLA
Trigger: CGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCT...GCAGGGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCACTGGGCGTGAGACGTaGGCAGCCTCAGGTGTACAG +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLTGRET*AASGVQ
Trigger: CTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGT...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACAGGAGAGGGCAGCATGTaGGAGGCAAATGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: PLERDGRRGSITRTYTHTGEGSM*EANVHQ
Trigger: TTGGTGCACATTTGCCTCTCACATGCTGCCCTCTCC...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CAGCCCTGTCTGACCACAGAACGTTTCTGGTTTGGGGTCTTTGGTCTTTGGCGGTGCTCCCGTCTGTGCTaGGCTCGATCACGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QPCLTTERFWFGVFGLWRCSRLC*ARSRGP
Trigger: TGGACCACGTGATCGAGCGCAGCACAGACGGGAGCA...CCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTCAGACAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp AGAAGAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCTGCGCAAATAGGCTATaGGGATGTAGGCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: RRGPCGSPADPPSKTRWACANRL*GCRPSD
Trigger: GTCAGAAGGCCTACATCCGCATAGCCTATTTGCGCA...GGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTTGTACTCGAGGGAGGTaGAGGCCACCGGCGCAAACA +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALCTRGR*RPPAQT
Trigger: TGTTTGCGCCGGTGGCCTGCACCTCCCTCGAGTACA...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTCAGTCCAGCCACTGCTaGAGCCAGCTGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALQSSHC*SQLAEV
Trigger: AACCTCAGCCAGCTGGCTGCAGCAGTGGCTGGACTG...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCCGTGTGGTGGTCGTGTaGCTGAATCCAGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLRVVVV*LNPGAT
Trigger: GGTAGCCCCTGGATTCAGGCACACGACCACCACACG...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCATTGATGCTGACGGGCTaGAAGCCTGAGGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPLMLTG*KPEVRM
Trigger: CATTCTCACCTCAGGCTTCCAGCCCGTCAGCATCAA...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GTGATGTATACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCTGGATGGTGAGCAGATaGGGGTTGTCTGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: VMYTLGSRDGSTRSSFRSWMVSR*GLSALL
Trigger: CAGCAAAGCAGACAACCCCCATCTGCTCACCATCCA...GCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTATACATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATCTGGGCTCCCCACAGTaGTCCATAGCCAGGATGACT +
Preference number: 4 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYLGSPQ*SIARMT
Trigger: AGTCATCCTGGCTATGGACCACTGTGGGGAGCCCAG...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGAAGAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCCGTGGTATCTGCCGTaGGTAAGGAAAGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RRGPCGSPADPPSKTRWAPWYLP*VRKAFF
Trigger: GAAAAAGGCTTTCCTTACCCACGGCAGATACCACGG...GGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCGCTGCACCACCTCCTTaGGTGCATCGTGGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFAAPPP*VHRGCH
Trigger: ATGACACCCACGATGCACTCAAGGAGGTGGTGCAGC...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCGGATCTCCTGGTAGCTaGCAAGGAGCTTACTCTTCC +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSGSPGS*QGAYSS
Trigger: GGAAGAGTAAGCTCCTTGTCAGCTACCAGGAGATCC...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp TGTTCCGGCCATGGGAGGCTGGAGTCGGATGCTCGGGGCAGAAGAGGACCCTGCTCGATGGCTTTGGGTTaGGAAATCGATGAGATCAAT +
Preference number: 4 (lower is better)
Translates to: CSGHGRLESDARGRRGPCSMALG*EIDEIN
Trigger: ATTGATCTCATCGATTTCTCAACCCAAAGCCATCGA...GCAGGGTCCTCTTCTGCCCCGAGCATCCGACTCCAGCCTCCCATGGCCGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCCACTTGAAGAAGATCTaGGTGGCGGGCACGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFHLKKI*VAGTAL
Trigger: CAAGGCCGTGCCCGCCACGCAGATCTTCTTCAAGTG...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGATGTATACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCCTGCTCGAAGTTCTTaGGCAAATAGGCTATGCGGA +
Preference number: 4 (lower is better)
Translates to: VMYTLGSRDGSTRSSFRSPARSS*ANRLCG
Trigger: TCCGCATAGCCTATTTGCGCAAGAACTTCGAGCAGG...GCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTATACATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTCGCACCACCAGGCTGTaGTCCCGCGTGATGTATACA +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALRTTRL*SRVMYT
Trigger: TGTATACATCACGCGGGAGCACAGCCTGGTGGTGCG...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGGTGAAGGTGCAGTaGAAGTACCGCTGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLRVKVQ*KYRCVP
Trigger: TGGCACGCAGCGGTACTTGCACTGCACCTTCACCCT...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCTGTGAGAGGCAAATGTaGACCAACACTGGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSCERQM*TNTGRE
Trigger: CTCACGCCCAGTGTTGGTGCACATTTGCCTCTCACA...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GCTCGAAGTTCTTGCGCAAATAGGCTATGCGGATGTAGGCCTTCTGACTCTTGGATCACGTGGTCCACCTaGCGCACCCACTCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: ARSSCANRLCGCRPSDSWITWST*RTHSPL
Trigger: CAACGGGGAGTGGGTGCGCCAGGTGGACCACGTGAT...CCAAGAGTCAGAAGGCCTACATCCGCATAGCCTATTTGCGCAAGAACTTCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GGGCCAGAAGCAGTGTGTACACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGTTGATGCTGACGGGCTaGAAGCCTGAGGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: GPEAVCTQRSLVQLRVSRLMLTG*KPEVRM
Trigger: CATTCTCACCTCAGGCTTCCAGCCCGTCAGCATCAA...CCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACACACTGCTTCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGACGTAGCAGGCACTaGCCTCCAGCTGGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLRRSRH*PPAGSS
Trigger: ACTACTGCCAGCTGGAGGCCAGTGCCTGCTACGTCT...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTGAGCTGGGCACATCGTaGATGGATAGGCGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALELGTS*MDRRRL
Trigger: CAACCTGCGCCTATCCATCCACGATGTGCCCAGCTC...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTGCTTCTGCCTGTCCTTaGTGGGTGCCAAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALASACP*WVPKLV
Trigger: CACCAGCTTTGGCACCCACCAAGGACAGGCAGAAGC...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCACACCACTGTACAGCCTaGGACTCCCATTGCATATTC +
Preference number: 4 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPHHCTA*DSHCIF
Trigger: GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTG...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAAACACCTTCTCGACCTaGTGCCTTGAGACATTAATG +
Preference number: 4 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRANTFST*CLETLM
Trigger: CATTAATGTCTCAAGGCAGCAGGTCGAGAAGGTGTT...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCCCTGCTCGAAGTTCTTaGGCAAATAGGCTATGCGGA +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSPARSS*ANRLCG
Trigger: TCCGCATAGCCTATTTGCGCAAGAACTTCGAGCAGG...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCCACCACCTCCTTGAGTaGATCGTGGGTGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLHHLLE*IVGVMQ
Trigger: CTGCATGACACCCACGATGCACTCAAGGAGGTGGTG...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCCACCACCTCCTTGAGTaGATCGTGGGTGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFHHLLE*IVGVMQ
Trigger: CTGCATGACACCCACGATGCACTCAAGGAGGTGGTG...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCTGGATGGTGAGCAGATaGGGGTTGTCTGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGWMVSR*GLSALL
Trigger: CAGCAAAGCAGACAACCCCCATCTGCTCACCATCCA...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCAGGGTGGGTCCAGGCTaGAAATTATCTTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSRVGPG*KLSSAE
Trigger: TTCGGCAGAAGATAATTTCCAGCCTGGACCCACCCT...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGATGGCTGTCCAGGTaGAGTTTCTGGGCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLRWLSR*SFWARV
Trigger: GACTCTGGCCCAGAAACTCCACCTGGACAGCCATCT...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCGCGCAGGCTGTTTTCTaGACATTCTGCCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFAQAVF*TFCPSQ
Trigger: CTGTGAGGGGCAGAATGTCCAGAAAACAGCCTGCGC...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS-3UTR TCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCGCACTGGCTTGTTCTTaGCGATGTACACATCCTCGG +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFALACS*RCTHPR
Trigger: CCGAGGATGTGTACATCGTCAAGAACAAGCCAGTGC...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTGGCAATAAACGAGGATaGGGACAAGCAGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALGNKRG*GQAAAG
Trigger: TCCTGCTGCTGCTTGTCCTCATCCTCGTTTATTGCC...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GCTCGAAGTTCTTGCGCAAATAGGCTATGCGGATGTAGGCCTTCTGACTCTTGGGCTGGAAGCCTGAGGTaGGAATGGACGAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ARSSCANRLCGCRPSDSWAGSLR*EWTSQP
Trigger: TGGCTGACTCGTCCATTCTCACCTCAGGCTTCCAGC...CCAAGAGTCAGAAGGCCTACATCCGCATAGCCTATTTGCGCAAGAACTTCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCCCAAGAGTAAGTGCGTaGATGCACTTAAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCPRVSA*MHLRQS
Trigger: ACTTTGTCTTAAGTGCATTCACGCACTTACTCTTGG...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GCTCGAAGTTCTTGCGCAAATAGGCTATGCGGATGTAGGCCTTCTGACTCTTGGCACTTGAAGAAGATCTaGGTGGCGGGCACGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ARSSCANRLCGCRPSDSWHLKKI*VAGTAL
Trigger: CAAGGCCGTGCCCGCCACGCAGATCTTCTTCAAGTG...CCAAGAGTCAGAAGGCCTACATCCGCATAGCCTATTTGCGCAAGAACTTCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCACCTTCTCGACCTGCTaGCTTGAGACATTAATGCGG +
Preference number: 4 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGTFSTC*LETLMR
Trigger: CCGCATTAATGTCTCAAGGCAGCAGGTCGAGAAGGT...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GTGATGTATACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCAACACCTTCTCGACCTaGTGCCTTGAGACATTAATG +
Preference number: 4 (lower is better)
Translates to: VMYTLGSRDGSTRSSFRSNTFST*CLETLM
Trigger: CATTAATGTCTCAAGGCAGCAGGTCGAGAAGGTGTT...GCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTATACATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GCTCGAAGTTCTTGCGCAAATAGGCTATGCGGATGTAGGCCTTCTGACTCTTGGCGCACCACCAGGCTGTaGTCCCGCGTGATGTATACA +
Preference number: 4 (lower is better)
Translates to: ARSSCANRLCGCRPSDSWRTTRL*SRVMYT
Trigger: TGTATACATCACGCGGGAGCACAGCCTGGTGGTGCG...CCAAGAGTCAGAAGGCCTACATCCGCATAGCCTATTTGCGCAAGAACTTCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GAAAGCCTTTTTCTTCACCTCAAAGCACTCGATGGCTTTGGGTTGAGAAATCGACAGCAGCGGAGGCGCTaGGGCGACGTGCCACGATGT +
Preference number: 4 (lower is better)
Translates to: ESLFLHLKALDGFGLRNRQQRRR*GDVPRC
Trigger: ACATCGTGGCACGTCGCCGCAGCGCCTCCGCTGCTG...TCGATTTCTCAACCCAAAGCCATCGAGTGCTTTGAGGTGAAGAAAAAGGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTCAGATGGGGGTTGTCTaGTTTGCTGGGCTTGATGCT +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALQMGVV*FAGLDA
Trigger: AGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTG...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp GAGAAATCGATGAGATCAATGAACGTTCAGATGTTCCGGCCATGGGAGGCTGGAGGCAGAAGAGGACCCTaGGGTTCTCCTGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: EKSMRSMNVQMFRPWEAGGRRGP*GSPADP
Trigger: AGGGTCTGCAGGAGAACCGCAGGGTCCTCTTCTGCC...TCCAGCCTCCCATGGCCGGAACATCTGAACGTTCATTGATCTCATCGATTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp CAGCCCTGTCTGACCACAGAACGTTTCTGGTTTGGGGTCTTTGGTCTTTGGCGGGTACACAGAGGTCACTaGTACAGTTGCGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QPCLTTERFWFGVFGLWRVHRGH*YSCGCP
Trigger: TGGACACCCGCAACTGTACCAGTGACCTCTGTGTAC...CCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTCAGACAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCTGGATGGTGAGCAGATaGGGGTTGTCTGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFWMVSR*GLSALL
Trigger: CAGCAAAGCAGACAACCCCCATCTGCTCACCATCCA...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR GCA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATAGGCACAGAAATGTTTaGATAAGGTCCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYRHRNV*IRSSSG
Trigger: GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCT...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATGCACACAAGCAGCACTaGCTTGTTCTTGACGATGTA +
Preference number: 4 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYAHKQH*LVLDDV
Trigger: TACATCGTCAAGAACAAGCCAGTGCTGCTTGTGTGC...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp TCCGGCTGGATGGTGAGCAGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGAGCACTCGATGGCTTTaGGTTGAGAAATCGATGAGA +
Preference number: 4 (lower is better)
Translates to: SGWMVSRWGLSALLGLMLSTRWL*VEKSMR
Trigger: TCTCATCGATTTCTCAACCCAAAGCCATCGAGTGCT...CAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTGCTCACCATCCAGCCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp TCCGGCTGGATGGTGAGCAGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGACCACAGAACGTTTCTaGTTTGGGGTCTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SGWMVSRWGLSALLGLMLTTERF*FGVFGL
Trigger: AAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGT...CAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTGCTCACCATCCAGCCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp GAAAGCCTTTTTCTTCACCTCAAAGCACTCGATGGCTTTGGGTTGAGAAATCGAGGTCCGGCTGGATGGTaGGCAGATGGGGGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ESLFLHLKALDGFGLRNRGPAGW*ADGGCL
Trigger: CAGACAACCCCCATCTGCTCACCATCCAGCCGGACC...TCGATTTCTCAACCCAAAGCCATCGAGTGCTTTGAGGTGAAGAAAAAGGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR GCA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACAAAGGCCAAGAGTAAGTaGGTGAATGCACTTAAGACA +
Preference number: 4 (lower is better)
Translates to: PLERDGRRGSITRTYTHTKAKSK*VNALKT
Trigger: TGTCTTAAGTGCATTCACGCACTTACTCTTGGCCTT...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR TCA 90 bp GAGAAATCGATGAGATCAATGAACGTTCAGATGTTCCGGCCATGGGAGGCTGGAGCACTGGCTTGTTCTTaGCGATGTACACATCCTCGG +
Preference number: 4 (lower is better)
Translates to: EKSMRSMNVQMFRPWEAGALACS*RCTHPR
Trigger: CCGAGGATGTGTACATCGTCAAGAACAAGCCAGTGC...TCCAGCCTCCCATGGCCGGAACATCTGAACGTTCATTGATCTCATCGATTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR TCA 90 bp GCGGCCGGGCAAGGCTGTGTACATAAGGCCAAGAGTAAGTGCGTGAATGCACTTCCAAGAGTAAGTGCGTaGATGCACTTAAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: AAGQGCVHKAKSKCVNALPRVSA*MHLRQS
Trigger: ACTTTGTCTTAAGTGCATTCACGCACTTACTCTTGG...AAGTGCATTCACGCACTTACTCTTGGCCTTATGTACACAGCCTTGCCCGGCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CCA 90 bp GCTCGAAGTTCTTGCGCAAATAGGCTATGCGGATGTAGGCCTTCTGACTCTTGGGCACACAAGCAGCACTaGCTTGTTCTTGACGATGTA +
Preference number: 4 (lower is better)
Translates to: ARSSCANRLCGCRPSDSWAHKQH*LVLDDV
Trigger: TACATCGTCAAGAACAAGCCAGTGCTGCTTGTGTGC...CCAAGAGTCAGAAGGCCTACATCCGCATAGCCTATTTGCGCAAGAACTTCGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CCA 90 bp GAAAGCCTTTTTCTTCACCTCAAAGCACTCGATGGCTTTGGGTTGAGAAATCGATCTGTTGGGCTACATTaGCCGCCAACCCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: ESLFLHLKALDGFGLRNRSVGLH*PPTLSI
Trigger: GATAGAGAGGGTTGGCGGCCAATGTAGCCCAACAGA...TCGATTTCTCAACCCAAAGCCATCGAGTGCTTTGAGGTGAAGAAAAAGGCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS CCA 90 bp ACTGCGCTGCCTCCGGGCGGCCGGCTGCCGGGCGCACGCGGCGCGTaGCTCCCTTGGGCACGGGAGCGCAGCAATGCAGCCGGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: TALPPGGRLPGARGA*LPWARERSNAAGAE
Trigger: CTCCGCCCCGGCTGCATTGCTGCGCTCCCGTGCCCAAGGGAGCCACGCGCCGCGTGCGCCCGGCAGCCGGCCGCCCGGAGGCAGCGCAGT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS CCA 90 bp ACCCGAGCCGCGGAGCCAAGCGGCGAGGACTATGCCCAGGAGCGCTaGCCACAGGCCGGGCCGGACGGCCATGGCCGCGGGCGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: TRAAEPSGEDYAQER*PQAGPDGHGRGRAG
Trigger: GCCTGCCCGCCCGCGGCCATGGCCGTCCGGCCCGGCCTGTGGCCAGCGCTCCTGGGCATAGTCCTCGCCGCTTGGCTCCGCGGCTCGGGT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS GCA 90 bp CACTCTGCTGGGCACCCGAGCCGCGGAGCCAAGCGGCGAGGACTATaGCCAGGAGCGCTGGCCACAGGCCGGGCCGGACGGCCATGGCCG +
Preference number: 5 (lower is better)
Translates to: HSAGHPSRGAKRRGL*PGALATGRAGRPWP
Trigger: CGGCCATGGCCGTCCGGCCCGGCCTGTGGCCAGCGCTCCTGGGCATAGTCCTCGCCGCTTGGCTCCGCGGCTCGGGTGCCCAGCAGAGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGCGGCGCGTGGCTCCCTaGGGCACGGGAGCGCAGCAA +
Preference number: 5 (lower is better)
Translates to: LNPGATPCPAVALGPAGLRRVAP*GTGAQQ
Trigger: TTGCTGCGCTCCCGTGCCCAAGGGAGCCACGCGCCG...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 90 bp CTCCACCAGGAAGTGGGGAAGCAGGTCCGGGTTGGCACCAGGCACTaGGTTGGCCACGGTGGCACTCTGCTGGGCACCCGAGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: LHQEVGKQVRVGTRH*VGHGGTLLGTRAAE
Trigger: CTCCGCGGCTCGGGTGCCCAGCAGAGTGCCACCGTGGCCAACCCAGTGCCTGGTGCCAACCCGGACCTGCTTCCCCACTTCCTGGTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GTGCCCTGGCACTCCTCCCCTCCGTTGCGGGGTGCTGGGTCAGAGCACTCACGGGCACCAGGCACTGGGTaGGCCACGGTGGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: VPWHSSPPLRGAGSEHSRAPGTG*ATVALC
Trigger: GCAGAGTGCCACCGTGGCCAACCCAGTGCCTGGTGC...CCGTGAGTGCTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTGCCAGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp GTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGAGCAGCTTGAGGCGCTaGGCGGCAGCCACGCTGAGG +
Preference number: 5 (lower is better)
Translates to: VPESRGYPLSGCGPRSCRSSLRR*AAATLR
Trigger: CCTCAGCGTGGCTGCCGCCAAGCGCCTCAAGCTGCT...CCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 90 bp AGTTCTGGGTGGAGAGGCGGGAGACGAACTCCTCGGCCTCAGAGGTaGGAGAGCTGTGGTGCAGTGTGTGGCGGCCGCCACCCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: SSGWRGGRRTPRPQR*ESCGAVCGGRHPGG
Trigger: GCCCCCTGGGTGGCGGCCGCCACACACTGCACCACAGCTCTCCCACCTCTGAGGCCGAGGAGTTCGTCTCCCGCCTCTCCACCCAGAACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 90 bp AGGCCAGCGTCTGGCTGGCCCAGTCCAGCCACTGCTGCAGCCAGCTaGCTGAGGTTGCCGTTGGGGAAGTGCCGCGCCTCCCACAGGTTG +
Preference number: 5 (lower is better)
Translates to: RPASGWPSPATAAAS*LRLPLGKCRASHRL
Trigger: CAACCTGTGGGAGGCGCGGCACTTCCCCAACGGCAACCTCAGCCAGCTGGCTGCAGCAGTGGCTGGACTGGGCCAGCCAGACGCTGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGAGCAGCTTGAGGCGCTaGGCGGCAGCCACGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPSSLRR*AAATLR
Trigger: CCTCAGCGTGGCTGCCGCCAAGCGCCTCAAGCTGCT...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCTCGGTCCTGCAGGCTaGGAGCAGGGCCCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: VVVCLNPGATPCPAVALGLGPAG*EQGPSD
Trigger: GTCTGAGGGGCCCTGCTCCAAGCCTGCAGGACCGAG...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS GCA 90 bp CCAGCCACTGCTGCAGCCAGCTGGCTGAGGTTGCCGTTGGGGAAGTaGCGCGCCTCCCACAGGTTGAGGATCATGGCTGTGGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PATAAASWLRLPLGK*RASHRLRIMAVGLG
Trigger: GCCCAGCCCCACAGCCATGATCCTCAACCTGTGGGAGGCGCGGCACTTCCCCAACGGCAACCTCAGCCAGCTGGCTGCAGCAGTGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS GCA 90 bp CGACACTGTGAAGAGGCCAGCGTCTGGCTGGCCCAGTCCAGCCACTaGTGCAGCCAGCTGGCTGAGGTTGCCGTTGGGGAAGTGCCGCGC +
Preference number: 5 (lower is better)
Translates to: RHCEEASVWLAQSSH*CSQLAEVAVGEVPR
Trigger: GCGCGGCACTTCCCCAACGGCAACCTCAGCCAGCTGGCTGCAGCAGTGGCTGGACTGGGCCAGCCAGACGCTGGCCTCTTCACAGTGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCTGCGTGGCGGGCACGGCCTaGCACACAAGCAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: EDPAVLLQTLPARQGGPCVAGTA*HTSSTG
Trigger: GCCAGTGCTGCTTGTGTGCAAGGCCGTGCCCGCCAC...GCAGGGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp AGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGTGTGGGCACTCCCCGTTGCACTaGAAGAAGATCTGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: RDSFGREGACPSSSPRCGHSPLH*KKICVA
Trigger: CGCCACGCAGATCTTCTTCAAGTGCAACGGGGAGTG...CCCACACCGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGCGCGCCTCCCACAGGTaGAGGATCATGGCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: LNPGATPCPAVALGPAGLRASHR*RIMAVG
Trigger: CCCCACAGCCATGATCCTCAACCTGTGGGAGGCGCG...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 90 bp ACACATCCTCGGGCTCCACCAGGAAGTGGGGAAGCAGGTCCGGGTTaGCACCAGGCACTGGGTTGGCCACGGTGGCACTCTGCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: THPRAPPGSGEAGPG*HQALGWPRWHSAGH
Trigger: GTGCCCAGCAGAGTGCCACCGTGGCCAACCCAGTGCCTGGTGCCAACCCGGACCTGCTTCCCCACTTCCTGGTGGAGCCCGAGGATGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329542.9
ENST00000509580.2
ENST00000513890.1
CDS CCA 90 bp CCTCAGCACTCAGCCTCCGACACTGTGAAGAGGCCAGCGTCTGGCTaGCCCAGTCCAGCCACTGCTGCAGCCAGCTGGCTGAGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: PQHSASDTVKRPASG*PSPATAAASWLRLP
Trigger: CGGCAACCTCAGCCAGCTGGCTGCAGCAGTGGCTGGACTGGGCCAGCCAGACGCTGGCCTCTTCACAGTGTCGGAGGCTGAGTGCTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 90 bp CCGGCCTCAGCACTCAGCCTCCGACACTGTGAAGAGGCCAGCGTCTaGCTGGCCCAGTCCAGCCACTGCTGCAGCCAGCTGGCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: PASALSLRHCEEASV*LAQSSHCCSQLAEV
Trigger: AACCTCAGCCAGCTGGCTGCAGCAGTGGCTGGACTGGGCCAGCCAGACGCTGGCCTCTTCACAGTGTCGGAGGCTGAGTGCTGAGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGCACCAGGCACTGGGTaGGCCACGGTGGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCAPGTG*ATVALC
Trigger: GCAGAGTGCCACCGTGGCCAACCCAGTGCCTGGTGC...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTGTGGCGGGCACGGCCTaGCACACAAGCAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: VARARVVVVCLNPGATPCVAGTA*HTSSTG
Trigger: GCCAGTGCTGCTTGTGTGCAAGGCCGTGCCCGCCAC...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GTGGCACGTGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTTCCAGGGACACCTCCTaGGCCAGCGGCTCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: VARARVVVVCLNPGATPCSRDTS*ASGSCS
Trigger: CGAGCAGGAGCCGCTGGCCAAGGAGGTGTCCCTGGA...ACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCACGTGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTCCACAGGCCGACCACTaGCTCCACGGGCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCPQADH*LHGLQL
Trigger: CAGCTGGAGCCCGTGGAGCAAGTGGTCGGCCTGTGG...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CAGGCACTGTCCCTCCTGGGCCCTGGGGCCGAGTGTGAGTGGCAGTGCCAGCCTGCTGTGGGGCTGGGCTaGGAGGCAAAGAAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: QALSLLGPGAECEWQCQPAVGLG*EAKKLR
Trigger: TCTCAGCTTCTTTGCCTCCAAGCCCAGCCCCACAGC...AGGCTGGCACTGCCACTCACACTCGGCCCCAGGGCCCAGGAGGGACAGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTCTCGGTCCTGCAGGCTaGGAGCAGGGCCCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCLGPAG*EQGPSD
Trigger: GTCTGAGGGGCCCTGCTCCAAGCCTGCAGGACCGAG...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGGCACCAGGCACTGGGTaGGCCACGGTGGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLAPGTG*ATVALC
Trigger: GCAGAGTGCCACCGTGGCCAACCCAGTGCCTGGTGC...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACCTCAAGGCTGGGGGAGGATGAGGAAGGGGATCTaGAAGGCACTGGGGCCCACC +
Preference number: 5 (lower is better)
Translates to: PIAYSQAPPGRAPQGWGRMRKGI*KALGPT
Trigger: GGTGGGCCCCAGTGCCTTCAAGATCCCCTTCCTCAT...CCTCCCCCAGCCTTGAGGTGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGGCCAGCTGGCTGAGGTaGCCGTTGGGGAAGTGCCGC +
Preference number: 5 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLASWLR*PLGKCR
Trigger: GCGGCACTTCCCCAACGGCAACCTCAGCCAGCTGGC...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGGGCTTCTGCCTGTCCTaGGTGGGTGCCAAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPGFCLS*VGAKAG
Trigger: ACCAGCTTTGGCACCCACCAAGGACAGGCAGAAGCC...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 90 bp TCATGTTGCTGGTGCCTCGGGGCAGGGAGCGGAAGTAGTTCTGGGTaGAGAGGCGGGAGACGAACTCCTCGGCCTCAGAGGTGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: SCCWCLGAGSGSSSG*RGGRRTPRPQRWES
Trigger: GCTCTCCCACCTCTGAGGCCGAGGAGTTCGTCTCCCGCCTCTCCACCCAGAACTACTTCCGCTCCCTGCCCCGAGGCACCAGCAACATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATCGGCGCGTGGCTCCCTaGGGCACGGGAGCGCAGCAA +
Preference number: 5 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYRRVAP*GTGAQQ
Trigger: TTGCTGCGCTCCCGTGCCCAAGGGAGCCACGCGCCG...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp AGCATTAAGGGACAGCTTCGGCCGGGAGGGGGCCTGTCCGAGCAGCTCTCCCCGCGCACCCACTCCCCGTaGCACTTGAAGAAGATCTGC +
Preference number: 5 (lower is better)
Translates to: SIKGQLRPGGGLSEQLSPRTHSP*HLKKIC
Trigger: GCAGATCTTCTTCAAGTGCAACGGGGAGTGGGTGCG...CGGGGAGAGCTGCTCGGACAGGCCCCCTCCCGGCCGAAGCTGTCCCTTAATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGCGCACCCACTCCCCGTaGCACTTGAAGAAGATCTGC +
Preference number: 5 (lower is better)
Translates to: LNPGATPCPAVALGPAGLRTHSP*HLKKIC
Trigger: GCAGATCTTCTTCAAGTGCAACGGGGAGTGGGTGCG...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCACACTCCTCCCCTCCGTaGCGGGGTGCTGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPHSSPP*RGAGSE
Trigger: CTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTG...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CACAGAGGTCACTGGTACAGTTGCGGGTGTCCAGGTCAGTGCCCTGGCACTCCTCACTCCTCCCCTCCGTaGCGGGGTGCTGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: HRGHWYSCGCPGQCPGTPHSSPP*RGAGSE
Trigger: CTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTG...AGGAGTGCCAGGGCACTGACCTGGACACCCGCAACTGTACCAGTGACCTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp CTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTCCTGCAGGCTTGAGGTCACTGGTACAGTaGCGGGTGTCCAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: LNPGATPCPAVALGPAGLRSLVQ*RVSRSV
Trigger: CACTGACCTGGACACCCGCAACTGTACCAGTGACCT...CAAGCCTGCAGGACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCCCTCGGTTGGGGGTTGTCTGCTTaGCTGGGCTTGATGCTGACG +
Preference number: 5 (lower is better)
Translates to: VVVCLNPGATPCPAVALGWGLSA*LGLMLT
Trigger: CGTCAGCATCAAGCCCAGCAAAGCAGACAACCCCCA...ACCGAGGGCCACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCCGCGCCTCCCACAGGTaGAGGATCATGGCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCRASHR*RIMAVG
Trigger: CCCCACAGCCATGATCCTCAACCTGTGGGAGGCGCG...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCTGCGTGCCCAGGGTTCTGTaGGGCTACATTGGCCGCCAA +
Preference number: 5 (lower is better)
Translates to: EDPAVLLQTLPARQGGPCVPRVL*GYIGRQ
Trigger: TTGGCGGCCAATGTAGCCCAACAGAACCCTGGGCAC...GCAGGGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACAGTGGCGGGCACGGCCTaGCACACAAGCAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: PLERDGRRGSITRTYTHTVAGTA*HTSSTG
Trigger: GCCAGTGCTGCTTGTGTGCAAGGCCGTGCCCGCCAC...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CGTGTCAGCAAGGCGGGCCTGTCGCACCACCAGGCTGTGCTCCCGCGTGATGTACACTCCCCGTTGCACTaGAAGAAGATCTGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: RVSKAGLSHHQAVLPRDVHSPLH*KKICVA
Trigger: CGCCACGCAGATCTTCTTCAAGTGCAACGGGGAGTG...TACATCACGCGGGAGCACAGCCTGGTGGTGCGACAGGCCCGCCTTGCTGACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp GAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCTGCCGCACCCACTCCCCGTaGCACTTGAAGAAGATCTGC +
Preference number: 5 (lower is better)
Translates to: EDPAVLLQTLPARQGGPCRTHSP*HLKKIC
Trigger: GCAGATCTTCTTCAAGTGCAACGGGGAGTGGGTGCG...GCAGGGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp TGTTCCGGCCATGGGAGGCTGGAGTCGGATGCTCGGGGCAGAAGAGGACCCTGCTCTGCTTTGCTGGGCTaGATGCTGACGGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: CSGHGRLESDARGRRGPCSALLG*MLTGWK
Trigger: CTTCCAGCCCGTCAGCATCAAGCCCAGCAAAGCAGA...GCAGGGTCCTCTTCTGCCCCGAGCATCCGACTCCAGCCTCCCATGGCCGGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGGCAAACAGAAGCAGCTaGAGGCGCTTGGCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQANRSS*RRLAAA
Trigger: GGCTGCCGCCAAGCGCCTCAAGCTGCTTCTGTTTGC...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGGCAAACAGAAGCAGCTaGAGGCGCTTGGCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLANRSS*RRLAAA
Trigger: GGCTGCCGCCAAGCGCCTCAAGCTGCTTCTGTTTGC...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGGCTTCTGCCTGTCCTaGGTGGGTGCCAAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCGFCLS*VGAKAG
Trigger: ACCAGCTTTGGCACCCACCAAGGACAGGCAGAAGCC...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCACGCGTGATGTATACATaGGGGTCCAGGGACGGGTCC +
Preference number: 5 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRARVMYT*GSRDGS
Trigger: GGACCCGTCCCTGGACCCCAATGTATACATCACGCG...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp AGAAGAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCCGCGTGATGTATACATaGGGGTCCAGGGACGGGTCC +
Preference number: 5 (lower is better)
Translates to: RRGPCGSPADPPSKTRWARVMYT*GSRDGS
Trigger: GGACCCGTCCCTGGACCCCAATGTATACATCACGCG...GGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp CGTGGCGCCACTGCCGTGGTATCTGCCGTGGGTAAGGAAAGCCTTTTTCTTCACCCACAGGCCGACCACTaGCTCCACGGGCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RGATAVVSAVGKESLFLHPQADH*LHGLQL
Trigger: CAGCTGGAGCCCGTGGAGCAAGTGGTCGGCCTGTGG...GTGAAGAAAAAGGCTTTCCTTACCCACGGCAGATACCACGGCAGTGGCGCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATCACTCCTCCCCTCCGTaGCGGGGTGCTGGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYHSSPP*RGAGSE
Trigger: CTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTG...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTTGGGGGTTGTCTGCTTaGCTGGGCTTGATGCTGACG +
Preference number: 5 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCWGLSA*LGLMLT
Trigger: CGTCAGCATCAAGCCCAGCAAAGCAGACAACCCCCA...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp TACATTGGGGTCCAGGGACGGGTCCACCAGGTCCTCGTTCCGGAGCCACTCCACTGGGGGTTGTCTGCTTaGCTGGGCTTGATGCTGACG +
Preference number: 5 (lower is better)
Translates to: YIGVQGRVHQVLVPEPLHWGLSA*LGLMLT
Trigger: CGTCAGCATCAAGCCCAGCAAAGCAGACAACCCCCA...GTGGAGTGGCTCCGGAACGAGGACCTGGTGGACCCGTCCCTGGACCCCAATGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGTGAGCAGATGGGGGTaGTCTGCTTTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCVSRWG*SALLGL
Trigger: CAAGCCCAGCAAAGCAGACAACCCCCATCTGCTCAC...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGTCGCACGACTGCTTTTaGAGGCGCAGGCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLSHDCF*RRRLQL
Trigger: CAGCTGGAGCCTGCGCCTCAAAAAGCAGTCGTGCGA...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTGGCTGAGGTTGCCGTaGGGGAAGTGCCGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYWLRLP*GKCRAS
Trigger: GGAGGCGCGGCACTTCCCCAACGGCAACCTCAGCCA...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCTGGCTGAGGTTGCCGTaGGGGAAGTGCCGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGWLRLP*GKCRAS
Trigger: GGAGGCGCGGCACTTCCCCAACGGCAACCTCAGCCA...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GTGCCCTGGCACTCCTCCCCTCCGTTGCGGGGTGCTGGGTCAGAGCACTCACGGCAGAACGTTTCTGGTTaGGGGTCTTTGGTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: VPWHSSPPLRGAGSEHSRQNVSG*GSLVFG
Trigger: GCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTG...CCGTGAGTGCTCTGACCCAGCACCCCGCAACGGAGGGGAGGAGTGCCAGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp GGGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCACTCCCCGTTGCACTaGAAGAAGATCTGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: GHATPHTHSPLYSLGLPLHSPLH*KKICVA
Trigger: CGCCACGCAGATCTTCTTCAAGTGCAACGGGGAGTG...CAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCTCCAGGGACACCTCCTaGGCCAGCGGCTCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLSRDTS*ASGSCS
Trigger: CGAGCAGGAGCCGCTGGCCAAGGAGGTGTCCCTGGA...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCCCACAGGCCGACCACTaGCTCCACGGGCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFPQADH*LHGLQL
Trigger: CAGCTGGAGCCCGTGGAGCAAGTGGTCGGCCTGTGG...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAAGGTCACTGGTACAGTaGCGGGTGTCCAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRARSLVQ*RVSRSV
Trigger: CACTGACCTGGACACCCGCAACTGTACCAGTGACCT...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp AGAAGAGGACCCTGCGGTTCTCCTGCAGACCCTCCCAGCAAGACAAGGTGGGCCAGGTCACTGGTACAGTaGCGGGTGTCCAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: RRGPCGSPADPPSKTRWARSLVQ*RVSRSV
Trigger: CACTGACCTGGACACCCGCAACTGTACCAGTGACCT...GGCCCACCTTGTCTTGCTGGGAGGGTCTGCAGGAGAACCGCAGGGTCCTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCGCCAGCTGGCTGAGGTaGCCGTTGGGGAAGTGCCGC +
Preference number: 5 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFASWLR*PLGKCR
Trigger: GCGGCACTTCCCCAACGGCAACCTCAGCCAGCTGGC...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CGTGGCGCCACTGCCGTGGTATCTGCCGTGGGTAAGGAAAGCCTTTTTCTTCACTGGGGTCTTTGGTCTTaGGCGGCGTGGCGCCACTGC +
Preference number: 5 (lower is better)
Translates to: RGATAVVSAVGKESLFLHWGLWS*AAWRHC
Trigger: GCAGTGGCGCCACGCCGCCAAAGACCAAAGACCCCA...GTGAAGAAAAAGGCTTTCCTTACCCACGGCAGATACCACGGCAGTGGCGCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp CTCAGACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCTTGAGAGGCGCCGGGTaGGTGCAGCTCCGGCTCCGT +
Preference number: 5 (lower is better)
Translates to: LRRAPTQQAQKCLHKVQLLRGAG*VQLRLR
Trigger: ACGGAGCCGGAGCTGCACCAACCCGGCGCCTCTCAA...GAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS CCA 90 bp GAGTTTCTGGGCCAGAGTCCGCCAGTCGGCACCCCGCCTACAGGGTaGGTCCAGGCTGGAAATTATCTTCTGCCGAATGAGGAAGGGGAT +
Preference number: 5 (lower is better)
Translates to: EFLGQSPPVGTPPTG*VQAGNYLLPNEEGD
Trigger: ATCCCCTTCCTCATTCGGCAGAAGATAATTTCCAGCCTGGACCCACCCTGTAGGCGGGGTGCCGACTGGCGGACTCTGGCCCAGAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp AGCATCACACGCACATACACACACACAGATGGGCTGGGCCTGGCCCAGGCTCCAAGCTGCACCACCTCCTaGAGTGCATCGTGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SITRTYTHTDGLGLAQAPSCTTS*SASWVS
Trigger: TGACACCCACGATGCACTCAAGGAGGTGGTGCAGCT...TGGAGCCTGGGCCAGGCCCAGCCCATCTGTGTGTGTGTATGTGCGTGTGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCAGCCTGGGACTCCCATaGCATATTCACAGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSSLGLP*HIHRPR
Trigger: GCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCT...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GTCTTTGGCGGCGTGGCGCCACTGCCGTGGTATCTGCCGTGGGTAAGGAAAGCCTTCTGTTGGGCTACATaGGCCGCCAACCCTCTCTAT +
Preference number: 5 (lower is better)
Translates to: VFGGVAPLPWYLPWVRKAFCWAT*AANPLY
Trigger: ATAGAGAGGGTTGGCGGCCAATGTAGCCCAACAGAA...GGCTTTCCTTACCCACGGCAGATACCACGGCAGTGGCGCCACGCCGCCAAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp TGGAAGCCTGAGGTGAGAATGGACGAGTCAGCCACATCTGAGTCCAGCCCCTCCTGGTCCTGGGAGGTGTaGGTGCCCAGGGTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: WKPEVRMDESATSESSPSWSWEV*VPRVLL
Trigger: CAACAGAACCCTGGGCACCAACACCTCCCAGGACCA...GGAGGGGCTGGACTCAGATGTGGCTGACTCGTCCATTCTCACCTCAGGCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp TCCGGCTGGATGGTGAGCAGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGTCTGGTTTGGGGTCTTaGGTCTTTGGCGGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: SGWMVSRWGLSALLGLMLSGLGS*VFGGVA
Trigger: CGCCACGCCGCCAAAGACCAAAGACCCCAAACCAGA...CAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCTGCTCACCATCCAGCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp CGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATCGCGTGATGTATACATaGGGGTCCAGGGACGGGTCC +
Preference number: 5 (lower is better)
Translates to: RHATHTLTTVQPGTPIAYRVMYT*GSRDGS
Trigger: GGACCCGTCCCTGGACCCCAATGTATACATCACGCG...ATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCTCTGCTTTGCTGGGCTaGATGCTGACGGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSSALLG*MLTGWK
Trigger: CTTCCAGCCCGTCAGCATCAAGCCCAGCAAAGCAGA...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCTCGCACGACTGCTTTTaGAGGCGCAGGCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGSHDCF*RRRLQL
Trigger: CAGCTGGAGCCTGCGCCTCAAAAAGCAGTCGTGCGA...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACAAGCTGCACCACCTCCTaGAGTGCATCGTGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: PLERDGRRGSITRTYTHTSCTTS*SASWVS
Trigger: TGACACCCACGATGCACTCAAGGAGGTGGTGCAGCT...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp ACTGTACAGCCTGGGACTCCCATTGCATATTCACAGGCCCCGCCGGGCAGGGCAAGCACTGGCTTGTTCTaGACGATGTACACATCCTCG +
Preference number: 5 (lower is better)
Translates to: TVQPGTPIAYSQAPPGRASTGLF*TMYTSS
Trigger: CGAGGATGTGTACATCGTCAAGAACAAGCCAGTGCT...TGCCCTGCCCGGCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCTGTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GTCTTTGGCGGCGTGGCGCCACTGCCGTGGTATCTGCCGTGGGTAAGGAAAGCCACAAGCAGCACTGGCTaGTTCTTGACGATGTACACA +
Preference number: 5 (lower is better)
Translates to: VFGGVAPLPWYLPWVRKATSSTG*FLTMYT
Trigger: TGTGTACATCGTCAAGAACAAGCCAGTGCTGCTTGT...GGCTTTCCTTACCCACGGCAGATACCACGGCAGTGGCGCCACGCCGCCAAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp TGCTCGTGTGGTGGTCGTGTGCCTGAATCCAGGGGCTACCCCCTGTCCGGCTGTGTGTCCTTGGTGATGTaGAAGTTGATGCTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: CSCGGRVPESRGYPLSGCVSLVM*KLMLKL
Trigger: GAGCTTCAGCATCAACTTCAACATCACCAAGGACAC...ACAGCCGGACAGGGGGTAGCCCCTGGATTCAGGCACACGACCACCACACGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCATGAGGAAGGGGATCTaGAAGGCACTGGGGCCCACC +
Preference number: 5 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFMRKGI*KALGPT
Trigger: GGTGGGCCCCAGTGCCTTCAAGATCCCCTTCCTCAT...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCGCTGTGGGGCTGGGCTaGGAGGCAAAGAAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFAVGLG*EAKKLR
Trigger: TCTCAGCTTCTTTGCCTCCAAGCCCAGCCCCACAGC...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCAGCCTGGGACTCCCATaGCATATTCACAGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFSLGLP*HIHRPR
Trigger: GCGGGGCCTGTGAATATGCAATGGGAGTCCCAGGCT...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCACAAGCAGCACTGGCTaGTTCTTGACGATGTACACA +
Preference number: 5 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCTSSTG*FLTMYT
Trigger: TGTGTACATCGTCAAGAACAAGCCAGTGCTGCTTGT...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CAGCCCTGTCTGACCACAGAACGTTTCTGGTTTGGGGTCTTTGGTCTTTGGCGGGTGAGCAGATGGGGGTaGTCTGCTTTGCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: QPCLTTERFWFGVFGLWRVSRWG*SALLGL
Trigger: CAAGCCCAGCAAAGCAGACAACCCCCATCTGCTCAC...CCGCCAAAGACCAAAGACCCCAAACCAGAAACGTTCTGTGGTCAGACAGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp ACAAAGTCAGGACACGAGCTTCACATGACAGGCCCCGCGTGGGGCACCAGCCAGGTGTCCTTGGTGATGTaGAAGTTGATGCTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: TKSGHELHMTGPAWGTSQVSLVM*KLMLKL
Trigger: GAGCTTCAGCATCAACTTCAACATCACCAAGGACAC...CTGGCTGGTGCCCCACGCGGGGCCTGTCATGTGAAGCTCGTGTCCTGACTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp AGATGGGGGTTGTCTGCTTTGCTGGGCTTGATGCTGACGGGCTGGAAGCCTGAGAGCACTGGCTTGTTCTaGACGATGTACACATCCTCG +
Preference number: 5 (lower is better)
Translates to: RWGLSALLGLMLTGWKPESTGLF*TMYTSS
Trigger: CGAGGATGTGTACATCGTCAAGAACAAGCCAGTGCT...CTCAGGCTTCCAGCCCGTCAGCATCAAGCCCAGCAAAGCAGACAACCCCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp GGCACGCCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCGCAAACCTTGTGTCCTaGGTGATGTTGAAGTTGATG +
Preference number: 5 (lower is better)
Translates to: GTPRHTHTHHCTAWDSHCANLVS*VMLKLM
Trigger: CATCAACTTCAACATCACCAAGGACACAAGGTTTGC...GCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGGCGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GGCAAATGTGCACCAACACTGGGCGTGAGACGTGAGCAGCCTCAGGTGTACAGCCAGGCACAGAAATGTTaGCATAAGGTCCAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GKCAPTLGVRREQPQVYSQAQKC*HKVQLR
Trigger: CCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTG...GCTGTACACCTGAGGCTGCTCACGTCTCACGCCCAGTGTTGGTGCACATTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 90 bp CAGCGTGAGGTAGATCTCATAGATCTTCCCTCGGGGTATGGCATCTaGGGGGATGAGGAGGCTGATTCCTGTATTAGGGATCATCAGCCG +
Preference number: 5 (lower is better)
Translates to: QREVDLIDLPSGYGI*GDEEADSCIRDHQP
Trigger: CGGCTGATGATCCCTAATACAGGAATCAGCCTCCTCATCCCCCCAGATGCCATACCCCGAGGGAAGATCTATGAGATCTACCTCACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACAACAAGCAGCACTGGCTaGTTCTTGACGATGTACACA +
Preference number: 5 (lower is better)
Translates to: PLERDGRRGSITRTYTHTTSSTG*FLTMYT
Trigger: TGTGTACATCGTCAAGAACAAGCCAGTGCTGCTTGT...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp GAAAGCCTTTTTCTTCACCTCAAAGCACTCGATGGCTTTGGGTTGAGAAATCGATCCAGGGACACCTCCTaGGCCAGCGGCTCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: ESLFLHLKALDGFGLRNRSRDTS*ASGSCS
Trigger: CGAGCAGGAGCCGCTGGCCAAGGAGGTGTCCCTGGA...TCGATTTCTCAACCCAAAGCCATCGAGTGCTTTGAGGTGAAGAAAAAGGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS-3UTR CAA 90 bp GACGTGCCCCTACCCAGCAGGCACAGAAATGTTTGCATAAGGTCCAGCTCAGGCCAGGCACAGAAATGTTaGCATAAGGTCCAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: DVPLPSRHRNVCIRSSSGQAQKC*HKVQLR
Trigger: CCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTG...GCCTGAGCTGGACCTTATGCAAACATTTCTGTGCCTGCTGGGTAGGGGCACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CCACGCCACACACACACTCACCACTGTACAGCCTGGGACTCCCATTGCATATTCAGCACTGGCTTGTTCTaGACGATGTACACATCCTCG +
Preference number: 5 (lower is better)
Translates to: PRHTHTHHCTAWDSHCIFSTGLF*TMYTSS
Trigger: CGAGGATGTGTACATCGTCAAGAACAAGCCAGTGCT...GAATATGCAATGGGAGTCCCAGGCTGTACAGTGGTGAGTGTGTGTGTGGCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS-3UTR CAA 90 bp CCCCTGGAGAGGGACGGGAGGAGAGGTAGCATCACACGCACATACACACACACAGCAAACCTTGTGTCCTaGGTGATGTTGAAGTTGATG +
Preference number: 5 (lower is better)
Translates to: PLERDGRRGSITRTYTHTANLVS*VMLKLM
Trigger: CATCAACTTCAACATCACCAAGGACACAAGGTTTGC...TGTGTGTGTGTATGTGCGTGTGATGCTACCTCTCCTCCCGTCCCTCTCCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS GCA 72 bp GGGCACCCGAGCCGCGGAGCCAAGCGGCGAGGACTATaGCCAGGAGCGCTGGCCACAGGCCGGGCCGGACGG +
Preference number: 6 (lower is better)
Translates to: GHPSRGAKRRGL*PGALATGRAGR
Trigger: CCGTCCGGCCCGGCCTGTGGCCAGCGCTCCTGGGCATAGTCCTCGCCGCTTGGCTCCGCGGCTCGGGTGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 72 bp GCGGAGCCAAGCGGCGAGGACTATGCCCAGGAGCGCTaGCCACAGGCCGGGCCGGACGGCCATGGCCGCGGG +
Preference number: 6 (lower is better)
Translates to: AEPSGEDYAQER*PQAGPDGHGRG
Trigger: CCCGCGGCCATGGCCGTCCGGCCCGGCCTGTGGCCAGCGCTCCTGGGCATAGTCCTCGCCGCTTGGCTCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 72 bp GGTCCGGGTTGGCACCAGGCACTGGGTTGGCCACGGTaGCACTCTGCTGGGCACCCGAGCCGCGGAGCCAAG +
Preference number: 6 (lower is better)
Translates to: GPGWHQALGWPR*HSAGHPSRGAK
Trigger: CTTGGCTCCGCGGCTCGGGTGCCCAGCAGAGTGCCACCGTGGCCAACCCAGTGCCTGGTGCCAACCCGGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CAA 90 bp AGGGAGGTGCAGGCCACCGGCGCAAACAGAAGCAGCTTGAGGCGCTaGGCGGCAGCCACGCTGAGGGCCTCTCCCACCAGGGCAAAGCGG +
Preference number: 6 (lower is better)
Translates to: REVQATGANRSSLRR*AAATLRASPTRAKR
Trigger: CCGCTTTGCCCTGGTGGGAGAGGCCCTCAGCGTGGCTGCCGCCAAGCGCCTCAAGCTGCTTCTGTTTGCGCCGGTGGCCTGCACCTCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS TCA 72 bp GGCCTGGCCGGCCTCAGCACTCAGCCTCCGACACTGTaGAGAGGCCAGCGTCTGGCTGGCCCAGTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: GLAGLSTQPPTL*RGQRLAGPVQP
Trigger: TGGCTGGACTGGGCCAGCCAGACGCTGGCCTCTTCACAGTGTCGGAGGCTGAGTGCTGAGGCCGGCCAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS GCA 72 bp GGACCTCCATGGTGGGCAGCCCACTGCTCCCGTCTGTaGTGCGCTCGATCACGTGGTCCACCTGGCGCACCC +
Preference number: 6 (lower is better)
Translates to: GPPWWAAHCSRL*CARSRGPPGAP
Trigger: GGGTGCGCCAGGTGGACCACGTGATCGAGCGCAGCACAGACGGGAGCAGTGGGCTGCCCACCATGGAGGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS GCA 72 bp AGTGTGTGGCGGCCGCCACCCAGGGGGCTGAGCAGGTaGCCATTGGTGAGCTGGAACTTGGGGCTGGGCCCA +
Preference number: 6 (lower is better)
Translates to: SVWRPPPRGLSR*PLVSWNLGLGP
Trigger: TGGGCCCAGCCCCAAGTTCCAGCTCACCAATGGGCACCTGCTCAGCCCCCTGGGTGGCGGCCGCCACACACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 72 bp TCTGGCTGGCCCAGTCCAGCCACTGCTGCAGCCAGCTaGCTGAGGTTGCCGTTGGGGAAGTGCCGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: SGWPSPATAAAS*LRLPLGKCRAS
Trigger: GGAGGCGCGGCACTTCCCCAACGGCAACCTCAGCCAGCTGGCTGCAGCAGTGGCTGGACTGGGCCAGCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CAA 72 bp CAGGCCACCGGCGCAAACAGAAGCAGCTTGAGGCGCTaGGCGGCAGCCACGCTGAGGGCCTCTCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: QATGANRSSLRR*AAATLRASPTR
Trigger: CCTGGTGGGAGAGGCCCTCAGCGTGGCTGCCGCCAAGCGCCTCAAGCTGCTTCTGTTTGCGCCGGTGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS GCA 72 bp CCTCCATGGTGGGCAGCCCACTGCTCCCGTCTGTGCTaGGCTCGATCACGTGGTCCACCTGGCGCACCCACT +
Preference number: 6 (lower is better)
Translates to: PPWWAAHCSRLC*ARSRGPPGAPT
Trigger: AGTGGGTGCGCCAGGTGGACCACGTGATCGAGCGCAGCACAGACGGGAGCAGTGGGCTGCCCACCATGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 72 bp GAAGTGGGGAAGCAGGTCCGGGTTGGCACCAGGCACTaGGTTGGCCACGGTGGCACTCTGCTGGGCACCCGA +
Preference number: 6 (lower is better)
Translates to: EVGKQVRVGTRH*VGHGGTLLGTR
Trigger: TCGGGTGCCCAGCAGAGTGCCACCGTGGCCAACCCAGTGCCTGGTGCCAACCCGGACCTGCTTCCCCACTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 72 bp TGGAGAGGCGGGAGACGAACTCCTCGGCCTCAGAGGTaGGAGAGCTGTGGTGCAGTGTGTGGCGGCCGCCAC +
Preference number: 6 (lower is better)
Translates to: WRGGRRTPRPQR*ESCGAVCGGRH
Trigger: GTGGCGGCCGCCACACACTGCACCACAGCTCTCCCACCTCTGAGGCCGAGGAGTTCGTCTCCCGCCTCTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CAA 72 bp AGGGAGGTGCAGGCCACCGGCGCAAACAGAAGCAGCTaGAGGCGCTTGGCGGCAGCCACGCTGAGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: REVQATGANRSS*RRLAAATLRAS
Trigger: AGAGGCCCTCAGCGTGGCTGCCGCCAAGCGCCTCAAGCTGCTTCTGTTTGCGCCGGTGGCCTGCACCTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CAA 90 bp TTGTACTCGAGGGAGGTGCAGGCCACCGGCGCAAACAGAAGCAGCTaGAGGCGCTTGGCGGCAGCCACGCTGAGGGCCTCTCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: LYSREVQATGANRSS*RRLAAATLRASPTR
Trigger: CCTGGTGGGAGAGGCCCTCAGCGTGGCTGCCGCCAAGCGCCTCAAGCTGCTTCTGTTTGCGCCGGTGGCCTGCACCTCCCTCGAGTACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 72 bp TGGTGCCTCGGGGCAGGGAGCGGAAGTAGTTCTGGGTaGAGAGGCGGGAGACGAACTCCTCGGCCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: WCLGAGSGSSSG*RGGRRTPRPQR
Trigger: CCTCTGAGGCCGAGGAGTTCGTCTCCCGCCTCTCCACCCAGAACTACTTCCGCTCCCTGCCCCGAGGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CAA 90 bp ATGCTGAAGCTCTGCCCGTCGCCCTCCACCTGCCACACCCACAGCTaGCAGGCCAGGTCACTAGTGCTGGGGCTGACACGCTCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: MLKLCPSPSTCHTHS*QARSLVLGLTRSRV
Trigger: CACCCTGGAGCGTGTCAGCCCCAGCACTAGTGACCTGGCCTGCAAGCTGTGGGTGTGGCAGGTGGAGGGCGACGGGCAGAGCTTCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CAA 90 bp TGGCCCAGTCCAGCCACTGCTGCAGCCAGCTGGCTGAGGTTGCCGTaGGGGAAGTGCCGCGCCTCCCACAGGTTGAGGATCATGGCTGTG +
Preference number: 6 (lower is better)
Translates to: WPSPATAAASWLRLP*GKCRASHRLRIMAV
Trigger: CACAGCCATGATCCTCAACCTGTGGGAGGCGCGGCACTTCCCCAACGGCAACCTCAGCCAGCTGGCTGCAGCAGTGGCTGGACTGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS TCA 72 bp CGGCTTCTGCCTGTCCTTGGTGGGTGCCAAAGCTGGTaGGAGTGTAGGTGTCGGGCCTGGCCGGCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: RLLPVLGGCQSW*ECRCRAWPASA
Trigger: TGCTGAGGCCGGCCAGGCCCGACACCTACACTCTCACCAGCTTTGGCACCCACCAAGGACAGGCAGAAGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS GCA 72 bp GCTGCAGCCAGCTGGCTGAGGTTGCCGTTGGGGAAGTaGCGCGCCTCCCACAGGTTGAGGATCATGGCTGTG +
Preference number: 6 (lower is better)
Translates to: AAASWLRLPLGK*RASHRLRIMAV
Trigger: CACAGCCATGATCCTCAACCTGTGGGAGGCGCGGCACTTCCCCAACGGCAACCTCAGCCAGCTGGCTGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS GCA 72 bp GGGCACAGGGTGGCGCAGGCTGTTTTCTGGACATTCTaGCCCTCACAGAAAGCGCCCCCGTTGAGAGGCGCC +
Preference number: 6 (lower is better)
Translates to: GHRVAQAVFWTF*PSQKAPPLRGA
Trigger: GGCGCCTCTCAACGGGGGCGCTTTCTGTGAGGGGCAGAATGTCCAGAAAACAGCCTGCGCCACCCTGTGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509580.2
CDS CAA 72 bp TCGATCACGTGGTCCACCTGGCGCACCCACTCCCCGTaGCACTTGAAGAAGATCTGCGTGGCGGGCACGGCC +
Preference number: 6 (lower is better)
Translates to: SITWSTWRTHSP*HLKKICVAGTA
Trigger: GGCCGTGCCCGCCACGCAGATCTTCTTCAAGTGCAACGGGGAGTGGGTGCGCCAGGTGGACCACGTGATCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329542.9
ENST00000509580.2
ENST00000513890.1
CDS CAA 72 bp AGGTTGCCGTTGGGGAAGTGCCGCGCCTCCCACAGGTaGAGGATCATGGCTGTGGGGCTGGGCTTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: RLPLGKCRASHR*RIMAVGLGLEA
Trigger: TGCCTCCAAGCCCAGCCCCACAGCCATGATCCTCAACCTGTGGGAGGCGCGGCACTTCCCCAACGGCAACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CAA 90 bp GTGCTGCGCTCGATCACGTGGTCCACCTGGCGCACCCACTCCCCGTaGCACTTGAAGAAGATCTGCGTGGCGGGCACGGCCTTGCACACA +
Preference number: 6 (lower is better)
Translates to: VLRSITWSTWRTHSP*HLKKICVAGTALHT
Trigger: TGTGTGCAAGGCCGTGCCCGCCACGCAGATCTTCTTCAAGTGCAACGGGGAGTGGGTGCGCCAGGTGGACCACGTGATCGAGCGCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329542.9
ENST00000509580.2
ENST00000513890.1
CDS TCA 72 bp GGGGGTCCACAGCTAACGATGGGACTCAGCAGGGTCTaGCAGCCAGCTAGGGGCAACCTCACGTCTTCCGGC +
Preference number: 6 (lower is better)
Translates to: GGPQLTMGLSRV*QPARGNLTSSG
Trigger: GCCGGAAGACGTGAGGTTGCCCCTAGCTGGCTGTCAGACCCTGCTGAGTCCCATCGTTAGCTGTGGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS GCA 72 bp AGGTGCAGCACATCCTCCCAGCTGCCCTCGCACGACTaGTTTTTGAGGCGCAGGCTCCAGCTGTCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: RCSTSSQLPSHD*FLRRRLQLSGL
Trigger: CAGCCCTGACAGCTGGAGCCTGCGCCTCAAAAAGCAGTCGTGCGAGGGCAGCTGGGAGGATGTGCTGCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 72 bp GGCCAGAGTCCGCCAGTCGGCACCCCGCCTACAGGGTaGGTCCAGGCTGGAAATTATCTTCTGCCGAATGAG +
Preference number: 6 (lower is better)
Translates to: GQSPPVGTPPTG*VQAGNYLLPNE
Trigger: CTCATTCGGCAGAAGATAATTTCCAGCCTGGACCCACCCTGTAGGCGGGGTGCCGACTGGCGGACTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CAA 90 bp TGCGTGGCGGGCACGGCCTTGCACACAAGCAGCACTGGCTTGTTCTaGACGATGTACACATCCTCGGGCTCCACCAGGAAGTGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: CVAGTALHTSSTGLF*TMYTSSGSTRKWGS
Trigger: GCTTCCCCACTTCCTGGTGGAGCCCGAGGATGTGTACATCGTCAAGAACAAGCCAGTGCTGCTTGTGTGCAAGGCCGTGCCCGCCACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329542.9
ENST00000509580.2
ENST00000513890.1
CDS CAA 90 bp TGCCGCGCCTCCCACAGGTTGAGGATCATGGCTGTGGGGCTGGGCTaGGAGGCAAAGAAGCTGAGATGGCTGTCCAGGTGGAGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: CRASHRLRIMAVGLG*EAKKLRWLSRWSFW
Trigger: CCAGAAACTCCACCTGGACAGCCATCTCAGCTTCTTTGCCTCCAAGCCCAGCCCCACAGCCATGATCCTCAACCTGTGGGAGGCGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CAA 72 bp GGGAGGTGTTGGTGCCCAGGGTTCTGTTGGGCTACATaGGCCGCCAACCCTCTCTATCTCCCTCACTGCTCC +
Preference number: 6 (lower is better)
Translates to: GRCWCPGFCWAT*AANPLYLPHCS
Trigger: GGAGCAGTGAGGGAGATAGAGAGGGTTGGCGGCCAATGTAGCCCAACAGAACCCTGGGCACCAACACCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513890.1
CDS CAA 72 bp GGCACGGCCTTGCACACAAGCAGCACTGGCTTGTTCTaGACGATGTACACATCCTCGGGCTCCACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: GTALHTSSTGLF*TMYTSSGSTRK
Trigger: CTTCCTGGTGGAGCCCGAGGATGTGTACATCGTCAAGAACAAGCCAGTGCTGCTTGTGTGCAAGGCCGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329542.9
ENST00000509580.2
ENST00000513890.1
CDS TCA 72 bp CTAGGGGCAACCTCACGTCTTCCGGCTTGTGCAGCGTaGGGTAGATCTCATAGATCTTCCCTCGGGGTATGG +
Preference number: 6 (lower is better)
Translates to: LGATSRLPACAA*GRSHRSSLGVW
Trigger: CCATACCCCGAGGGAAGATCTATGAGATCTACCTCACGCTGCACAAGCCGGAAGACGTGAGGTTGCCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS GCA 72 bp CGCCTACAGGGTGGGTCCAGGCTGGAAATTATCTTCTaGCGAATGAGGAAGGGGATCTTGAAGGCACTGGGG +
Preference number: 6 (lower is better)
Translates to: RLQGGSRLEIIF*RMRKGILKALG
Trigger: CCCCAGTGCCTTCAAGATCCCCTTCCTCATTCGGCAGAAGATAATTTCCAGCCTGGACCCACCCTGTAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CAA 72 bp AGCTCAGCAAACCTTGTGTCCTTGGTGATGTTGAAGTaGATGCTGAAGCTCTGCCCGTCGCCCTCCACCTGC +
Preference number: 6 (lower is better)
Translates to: SSANLVSLVMLK*MLKLCPSPSTC
Trigger: GCAGGTGGAGGGCGACGGGCAGAGCTTCAGCATCAACTTCAACATCACCAAGGACACAAGGTTTGCTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2
CDS CCA 72 bp GTAGATCTCATAGATCTTCCCTCGGGGTATGGCATCTaGGGGGATGAGGAGGCTGATTCCTGTATTAGGGAT +
Preference number: 6 (lower is better)
Translates to: VDLIDLPSGYGI*GDEEADSCIRD
Trigger: ATCCCTAATACAGGAATCAGCCTCCTCATCCCCCCAGATGCCATACCCCGAGGGAAGATCTATGAGATCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329542.9
ENST00000509580.2