RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UMPS (Homo sapiens)

Ensembl gene IDs: ENSG00000114491

Ensembl transcript IDs: ENST00000232607.7, ENST00000460034.5, ENST00000462091.5, ENST00000467167.5, ENST00000474588.5, ENST00000479719.5, ENST00000487622.5, ENST00000495751.1, ENST00000497791.5, ENST00000628619.1

Found 868 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGTGGAGGCGGATCCCGTGCGCCTGCAACTTGTCCTTGCCTCCCTaGTCTCTGTCCAACAGCACTATGGCATCAGTGACCTTCAAGCCC +
Preference number: 1 (lower is better)
Translates to: EWRRIPCACNLSLPP*SLSNSTMASVTFKP
Trigger: GGGCTTGAAGGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR GCA 90 bp AGGGAGCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATaGAAAGGCAGGCCCACTTCTTGCAGGCCTTTCACAACTCCTGAG +
Preference number: 1 (lower is better)
Translates to: REPVELISAIRRHPR*KGRPTSCRPFTTPE
Trigger: CTCAGGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR GCA 90 bp CTCCCCAAGTCTCACCCTGCAGGGCTGCTAAGTGCAGGGAGACAATaGAGTGTTGGGACATTGGAGGCAGGACTATGGAGCTGTCTGTGC +
Preference number: 1 (lower is better)
Translates to: LPKSHPAGLLSAGRQ*SVGTLEAGLWSCLC
Trigger: GCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCATTGTCTCCCTGCACTTAGCAGCCCTGCAGGGTGAGACTTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp GTCTCACCCTGCAGGGCTGCTAAGTGCAGGGAGACAATGCAGTGTTaGGACATTGGAGGCAGGACTATGGAGCTGTCTGTGCACAAGGGC +
Preference number: 1 (lower is better)
Translates to: VSPCRAAKCRETMQC*DIGGRTMELSVHKG
Trigger: GCCCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCATTGTCTCCCTGCACTTAGCAGCCCTGCAGGGTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 90 bp GACTTTTGGCTTCCCCAGAGTAGCCCTGAGGGCCAACTCCCTTCCTaGTCCTTCTGTGGCCACTTCTTCCTTGAGAGTTGGTCTCTCCCA +
Preference number: 1 (lower is better)
Translates to: DFWLPQSSPEGQLPS*SFCGHFFLESWSLP
Trigger: TGGGAGAGACCAACTCTCAAGGAAGAAGTGGCCACAGAAGGAGCAGGAAGGGAGTTGGCCCTCAGGGCTACTCTGGGGAAGCCAAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 90 bp TCCAGCATTTTGGACAATGTACACACTGAGTGGAGGCGGATCCCGTaGGCCTGCAACTTGTCCTTGCCTCCCTGCTCTCTGTCCAACAGC +
Preference number: 1 (lower is better)
Translates to: SSILDNVHTEWRRIP*ACNLSLPPCSLSNS
Trigger: GCTGTTGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCACTCAGTGTGTACATTGTCCAAAATGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CCA 90 bp AGTGCAGGGAGACAATGCAGTGTTGGGACATTGGAGGCAGGACTATaGAGCTGTCTGTGCACAAGGGCACCCCCGAAGACATGGTTGTCC +
Preference number: 1 (lower is better)
Translates to: SAGRQCSVGTLEAGL*SCLCTRAPPKTWLS
Trigger: GGACAACCATGTCTTCGGGGGTGCCCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCATTGTCTCCCTGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp TGCTGCTCGAGAATCTCCAGCATTTTGGACAATGTACACACTGAGTaGAGGCGGATCCCGTGCGCCTGCAACTTGTCCTTGCCTCCCTGC +
Preference number: 1 (lower is better)
Translates to: CCSRISSILDNVHTE*RRIPCACNLSLPPC
Trigger: GCAGGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCTCGAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR TCA 90 bp GTGAGCAGAAACACGAGAGTTTGGGTTCAGGCTCGGAACTGGTACTaGGTGACTCCCACCCACCGGGTACTTTGGATGAGAACTGCACCC +
Preference number: 1 (lower is better)
Translates to: VSRNTRVWVQARNWY*VTPTHRVLWMRTAP
Trigger: GGGTGCAGTTCTCATCCAAAGTACCCGGTGGGTGGGAGTCACTCAGTACCAGTTCCGAGCCTGAACCCAAACTCTCGTGTTTCTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp CAACTCCCTTCCTGCTCCTTCTGTGGCCACTTCTTCCTTGAGAGTTaGTCTCTCCCACAGACAGCATTTCCCTGGAGATGCAGCACTGGG +
Preference number: 1 (lower is better)
Translates to: QLPSCSFCGHFFLES*SLPQTAFPWRCSTG
Trigger: CCCAGTGCTGCATCTCCAGGGAAATGCTGTCTGTGGGAGAGACCAACTCTCAAGGAAGAAGTGGCCACAGAAGGAGCAGGAAGGGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 90 bp TCCTGGAGATGGCAGGAGCCCACATTTCTAAAGGACAGGAGCATGTaGCTCTTAGCAGGAGGCAGACCTCAAGGCTGTCTCACTGCAGAG +
Preference number: 1 (lower is better)
Translates to: SWRWQEPTFLKDRSM*LLAGGRPQGCLTAE
Trigger: CTCTGCAGTGAGACAGCCTTGAGGTCTGCCTCCTGCTAAGAGTCACATGCTCCTGTCCTTTAGAAATGTGGGCTCCTGCCATCTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 90 bp GCCCAGGCTGCTGGGCAAACCACAAATCTGCTAACGCAGAAACTCTaGTGGTGTGGGGCACAAGGACCTACACTTTCAGTAAGTGGCAGG +
Preference number: 1 (lower is better)
Translates to: AQAAGQTTNLLTQKL*WCGAQGPTLSVSGR
Trigger: CCTGCCACTTACTGAAAGTGTAGGTCCTTGTGCCCCACACCATCAGAGTTTCTGCGTTAGCAGATTTGTGGTTTGCCCAGCAGCCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 90 bp ACCAGGGCATATTCTTCCCATGTGGTGGCAGAAGCCAGAGAGGGGTaGGCAGAAACACGAGAGTTTGGGTTCAGGCTCGGAACTGGTACT +
Preference number: 1 (lower is better)
Translates to: TRAYSSHVVAEAREG*AETREFGFRLGTGT
Trigger: AGTACCAGTTCCGAGCCTGAACCCAAACTCTCGTGTTTCTGCTCACCCCTCTCTGGCTTCTGCCACCACATGGGAAGAATATGCCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 90 bp TTTCTGCTGCTCGAGAATCTCCAGCATTTTGGACAATGTACACACTaGGTGGAGGCGGATCCCGTGCGCCTGCAACTTGTCCTTGCCTCC +
Preference number: 1 (lower is better)
Translates to: FLLLENLQHFGQCTH*VEADPVRLQLVLAS
Trigger: GGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCTCGAGCAGCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR GCA 90 bp TCATTTCAGGATCCTCCCCAAGTCTCACCCTGCAGGGCTGCTAAGTaGAGGGAGACAATGCAGTGTTGGGACATTGGAGGCAGGACTATG +
Preference number: 1 (lower is better)
Translates to: SFQDPPQVSPCRAAK*RETMQCWDIGGRTM
Trigger: CATAGTCCTGCCTCCAATGTCCCAACACTGCATTGTCTCCCTGCACTTAGCAGCCCTGCAGGGTGAGACTTGGGGAGGATCCTGAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 90 bp ATTTTGGACAATGTACACACTGAGTGGAGGCGGATCCCGTGCGCCTaGAACTTGTCCTTGCCTCCCTGCTCTCTGTCCAACAGCACTATG +
Preference number: 1 (lower is better)
Translates to: ILDNVHTEWRRIPCA*NLSLPPCSLSNSTM
Trigger: CATAGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCACTCAGTGTGTACATTGTCCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR GCA 90 bp GAGAAGCTTCGATGCAACTGGGTGGATCCTGGGCAGCTCTGCACGTaGACCGAAGCTGAGTTCTTTGGGTGCTTCCTTTATAGAAAGGGG +
Preference number: 1 (lower is better)
Translates to: EKLRCNWVDPGQLCT*TEAEFFGCFLYRKG
Trigger: CCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CCA 90 bp CTTATGTTCTACAGAATGCCTCGAGTAGCTGGAGAGGCTGGGGGATaGCGTTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCC +
Preference number: 1 (lower is better)
Translates to: LMFYRMPRVAGEAGG*RSPLHQSHRHSVHP
Trigger: GGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAACGCCATCCCCCAGCCTCTCCAGCTACTCGAGGCATTCTGTAGAACATAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp AGATCGCTGATGCAGCCAGAGGTGATGGTTGGGAAGGCAGAAGACTaGTTCCTGGTGGAGCCCAGTTTTTGTCTTCCTGGTAACCAGGCT +
Preference number: 1 (lower is better)
Translates to: RSLMQPEVMVGKAED*FLVEPSFCLPGNQA
Trigger: AGCCTGGTTACCAGGAAGACAAAAACTGGGCTCCACCAGGAACCAGTCTTCTGCCTTCCCAACCATCACCTCTGGCTGCATCAGCGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 90 bp GAGCACCGGGACAGCCCTCACCCTGCCCCTGCTCAAACACCACCTTaGATGTGGGCTTTCTCTTTATTATTAATGAAGGCTTACCTCCCC +
Preference number: 1 (lower is better)
Translates to: EHRDSPHPAPAQTPP*MWAFSLLLMKAYLP
Trigger: GGGGAGGTAAGCCTTCATTAATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCAGGGTGAGGGCTGTCCCGGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 90 bp ACCTCAAGGCTGTCTCACTGCAGAGGCAGAAATGTGAATAACCAGTaGAGTGGTTCTCAAAGTCCAGTCCCTGCGCAGGCAACCGCAGCA +
Preference number: 1 (lower is better)
Translates to: TSRLSHCRGRNVNNQ*SGSQSPVPAQATAA
Trigger: TGCTGCGGTTGCCTGCGCAGGGACTGGACTTTGAGAACCACTTCACTGGTTATTCACATTTCTGCCTCTGCAGTGAGACAGCCTTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 90 bp AAGCCTGAGAAGCTTCGATGCAACTGGGTGGATCCTGGGCAGCTCTaGACGTGCACCGAAGCTGAGTTCTTTGGGTGCTTCCTTTATAGA +
Preference number: 1 (lower is better)
Translates to: KPEKLRCNWVDPGQL*TCTEAEFFGCFLYR
Trigger: TCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CCA 90 bp TGCTGGGCAAACCACAAATCTGCTAACGCAGAAACTCTGATGGTGTaGGGCACAAGGACCTACACTTTCAGTAAGTGGCAGGGGCTGGGT +
Preference number: 1 (lower is better)
Translates to: CWANHKSANAETLMV*GTRTYTFSKWQGLG
Trigger: ACCCAGCCCCTGCCACTTACTGAAAGTGTAGGTCCTTGTGCCCCACACCATCAGAGTTTCTGCGTTAGCAGATTTGTGGTTTGCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp GTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTaGATCCTGGGCAGCTCTGCACGTGCACCGAAGCTGAGTTCTTTG +
Preference number: 1 (lower is better)
Translates to: VSFFCISLRSFDATG*ILGSSARAPKLSSL
Trigger: CAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CCA 90 bp ATTGGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTaGGTGGATCCTGGGCAGCTCTGCACGTGCACCGAAGCTGAGTTC +
Preference number: 1 (lower is better)
Translates to: IGLLLLHKPEKLRCN*VDPGQLCTCTEAEF
Trigger: GAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR TCA 90 bp GAGCCTCCTCTCATTTCCCCTCAAATCACCTTAGCAGGGGTCCTGTaGAATAGGGTTCATCAACAGGAACAGTGCCTGCGTCCTGGAGAT +
Preference number: 1 (lower is better)
Translates to: EPPLISPQITLAGVL*NRVHQQEQCLRPGD
Trigger: ATCTCCAGGACGCAGGCACTGTTCCTGTTGATGAACCCTATTTCACAGGACCCCTGCTAAGGTGATTTGAGGGGAAATGAGAGGAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 90 bp GATCCTGGGCAGCTCTGCACGTGCACCGAAGCTGAGTTCTTTGGGTaGTTCCTTTATAGAAAGGGGAGAACCATTATGATTCGCTGCCAC +
Preference number: 1 (lower is better)
Translates to: DPGQLCTCTEAEFFG*FLYRKGRTIMIRCH
Trigger: GTGGCAGCGAATCATAATGGTTCTCCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CCA 90 bp CCTCTTTGGAGAGTGAGCAATGGCAGTTCTGGGAACCAGCCCATGTaGATACCTGGACTATCACTTTTAGGCCAGAGATGGAGGGGAATG +
Preference number: 1 (lower is better)
Translates to: PLWRVSNGSSGNQPM*IPGLSLLGQRWRGM
Trigger: CATTCCCCTCCATCTCTGGCCTAAAAGTGATAGTCCAGGTATCCACATGGGCTGGTTCCCAGAACTGCCATTGCTCACTCTCCAAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp CTATGGGCTTATGTTCTACAGAATGCCTCGAGTAGCTGGAGAGGCTaGGGGATGGCGTTCTCCACTCCATCAGTCTCACAGACATTCTGT +
Preference number: 1 (lower is better)
Translates to: LWAYVLQNASSSWRG*GMAFSTPSVSQTFC
Trigger: ACAGAATGTCTGTGAGACTGATGGAGTGGAGAACGCCATCCCCCAGCCTCTCCAGCTACTCGAGGCATTCTGTAGAACATAAGCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp ACACACAATCTATGGGCTTATGTTCTACAGAATGCCTCGAGTAGCTaGAGAGGCTGGGGGATGGCGTTCTCCACTCCATCAGTCTCACAG +
Preference number: 1 (lower is better)
Translates to: THNLWAYVLQNASSS*RGWGMAFSTPSVSQ
Trigger: CTGTGAGACTGATGGAGTGGAGAACGCCATCCCCCAGCCTCTCCAGCTACTCGAGGCATTCTGTAGAACATAAGCCCATAGATTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 90 bp TGTCCTTGCCTCCCTGCTCTCTGTCCAACAGCACTATGGCATCAGTaGCCTTCAAGCCCTCCTTCTGAAGAACCTCAACAGTTTCCAAAA +
Preference number: 1 (lower is better)
Translates to: CPCLPALCPTALWHQ*PSSPPSEEPQQFPK
Trigger: TTTTGGAAACTGTTGAGGTTCTTCAGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR GCA 90 bp TTCCTTGAGAGTTGGTCTCTCCCACAGACAGCATTTCCCTGGAGATaGAGCACTGGGGACATGAAGCCCAAATTGGACTTTAGAGCAGAA +
Preference number: 1 (lower is better)
Translates to: FLESWSLPQTAFPWR*STGDMKPKLDFRAE
Trigger: TTCTGCTCTAAAGTCCAATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAGGGAAATGCTGTCTGTGGGAGAGACCAACTCTCAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 90 bp GCCAGTGAAACATCAGCAGATAGACACAGATTGGTCTCCTTCTTTTaGATAAGCCTGAGAAGCTTCGATGCAACTGGGTGGATCCTGGGC +
Preference number: 1 (lower is better)
Translates to: ASETSADRHRLVSFF*ISLRSFDATGWILG
Trigger: GCCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAATCTGTGTCTATCTGCTGATGTTTCACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CCA 90 bp CACTTCTTCCTTGAGAGTTGGTCTCTCCCACAGACAGCATTTCCCTaGAGATGCAGCACTGGGGACATGAAGCCCAAATTGGACTTTAGA +
Preference number: 1 (lower is better)
Translates to: HFFLESWSLPQTAFP*RCSTGDMKPKLDFR
Trigger: TCTAAAGTCCAATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAGGGAAATGCTGTCTGTGGGAGAGACCAACTCTCAAGGAAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp CACACACACACACACACACACACACACACACACACACACAATCTATaGGCTTATGTTCTACAGAATGCCTCGAGTAGCTGGAGAGGCTGG +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHTHTHNL*AYVLQNASSSWRGW
Trigger: CCAGCCTCTCCAGCTACTCGAGGCATTCTGTAGAACATAAGCCCATAGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp CAAAGCAGTCTAGTCCCATGGAGAGATAGGAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACAGGACTGTGGCTGTCTAACAAACAC +
Preference number: 1 (lower is better)
Translates to: QSSLVPWRDRKDPQM*KTLTQTGLWLSNKH
Trigger: GTGTTTGTTAGACAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGACTAGACTGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR TCA 90 bp CTGTCCAACAGCACTATGGCATCAGTGACCTTCAAGCCCTCCTTCTaGAGAACCTCAACAGTTTCCAAAACACTAGATCCACTGGTGACA +
Preference number: 1 (lower is better)
Translates to: LSNSTMASVTFKPSF*RTSTVSKTLDPLVT
Trigger: TGTCACCAGTGGATCTAGTGTTTTGGAAACTGTTGAGGTTCTTCAGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGCTGTTGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CCA 90 bp AAGGGGCAAAGGAACCAAGCTGCAGAGAGTCCACAGGGTTACTCATaGTCATTTTCAATGACTGACACTTGGTCCACTGTGTTAAAGTAC +
Preference number: 1 (lower is better)
Translates to: KGQRNQAAESPQGYS*SFSMTDTWSTVLKY
Trigger: GTACTTTAACACAGTGGACCAAGTGTCAGTCATTGAAAATGACCATGAGTAACCCTGTGGACTCTCTGCAGCTTGGTTCCTTTGCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 90 bp AGCTGCAGAGAGTCCACAGGGTTACTCATGGTCATTTTCAATGACTaGCACTTGGTCCACTGTGTTAAAGTACAGGATTCACACAAGACC +
Preference number: 1 (lower is better)
Translates to: SCRESTGLLMVIFND*HLVHCVKVQDSHKT
Trigger: GGTCTTGTGTGAATCCTGTACTTTAACACAGTGGACCAAGTGTCAGTCATTGAAAATGACCATGAGTAACCCTGTGGACTCTCTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp GAGAGTCCACAGGGTTACTCATGGTCATTTTCAATGACTGACACTTaGTCCACTGTGTTAAAGTACAGGATTCACACAAGACCAAGCAGC +
Preference number: 1 (lower is better)
Translates to: ESPQGYSWSFSMTDT*STVLKYRIHTRPSS
Trigger: GCTGCTTGGTCTTGTGTGAATCCTGTACTTTAACACAGTGGACCAAGTGTCAGTCATTGAAAATGACCATGAGTAACCCTGTGGACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 90 bp TTTGGGTGCTTCCTTTATAGAAAGGGGAGAACCATTATGATTCGCTaGCACAAAGACATTCTCCTGAATAAACCTCTTCACTCTCCCAAC +
Preference number: 1 (lower is better)
Translates to: FGCFLYRKGRTIMIR*HKDILLNKPLHSPN
Trigger: GTTGGGAGAGTGAAGAGGTTTATTCAGGAGAATGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCTTTCTATAAAGGAAGCACCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CCA 90 bp TATTTAGCTAGATATTGCCGTGTAATAAACCACCCTGGAACTCCATaGCATGCACTACTAAGCATTTATCACGCTCCCAGGCTTACAGAT +
Preference number: 1 (lower is better)
Translates to: YLARYCRVINHPGTP*HALLSIYHAPRLTD
Trigger: ATCTGTAAGCCTGGGAGCGTGATAAATGCTTAGTAGTGCATGCCATGGAGTTCCAGGGTGGTTTATTACACGGCAATATCTAGCTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp TCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTaGTTTCATGCTTACTCGGGAGCCAGAAATAAAACCAACAACAAA +
Preference number: 1 (lower is better)
Translates to: SSCFQLNSWSQVKKF*FHAYSGARNKTNNK
Trigger: TTTGTTGTTGGTTTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR CCA 90 bp ACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCCAAGATTATCTCCTCCTGCTTCCAA +
Preference number: 1 (lower is better)
Translates to: TYNDDIGTSFANNFL*AIVLLAKIISSCFQ
Trigger: TTGGAAGCAGGAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR TCA 90 bp CTCAGCACATCACTCCAAAGGCCTCTCAACATATCACTCCAACACTaGAGACACCTAAGAGATTCCTGCAAGTTTTTGTCAGAAAATTCT +
Preference number: 1 (lower is better)
Translates to: LSTSLQRPLNISLQH*RHLRDSCKFLSENS
Trigger: AGAATTTTCTGACAAAAACTTGCAGGAATCTCTTAGGTGTCTTCAGTGTTGGAGTGATATGTTGAGAGGCCTTTGGAGTGATGTGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp ACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCCAAGATTATCTCCTTCATACTGCTT +
Preference number: 1 (lower is better)
Translates to: TYNDDIGTSFANNFL*AIVLLAKIISFILL
Trigger: AAGCAGTATGAAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497791.5
3UTR TCA 90 bp AACTCCTTCATCACATCCAGAGTAAAATCATTCAAAATATCTACATaGGTCTTCAGCATGCAGATACTAGGTCCTAAAGCATCTGCTAGC +
Preference number: 1 (lower is better)
Translates to: NSFITSRVKSFKIST*VFSMQILGPKASAS
Trigger: GCTAGCAGATGCTTTAGGACCTAGTATCTGCATGCTGAAGACTCATGTAGATATTTTGAATGATTTTACTCTGGATGTGATGAAGGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR CCA 90 bp TCTTTATTATTAATGAAGGCTTACCTCCCCTCTACTAATGACCGTTaGGACAATTATGTGGGATCCTTAAGCAAATACCCAAATGGAATC +
Preference number: 1 (lower is better)
Translates to: SLLLMKAYLPSTNDR*DNYVGSLSKYPNGI
Trigger: GATTCCATTTGGGTATTTGCTTAAGGATCCCACATAATTGTCCCAACGGTCATTAGTAGAGGGGAGGTAAGCCTTCATTAATAATAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 90 bp TTTCCTATATCTGCAAACTTCCGGTCTTCAAATATCAAGAACTCATaGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTA +
Preference number: 1 (lower is better)
Translates to: FPISANFRSSNIKNS*HFARVINSFITSRV
Trigger: TACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCTTGATATTTGAAGACCGGAAGTTTGCAGATATAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR CAA 90 bp CCTGCAGGGCTGCTAAGTGCAGGGAGACAATGCAGTGTTGGGACATaGGAGGCAGGACTATGGAGCTGTCTGTGCACAAGGGCACCCCCG +
Preference number: 2 (lower is better)
Translates to: PAGLLSAGRQCSVGT*EAGLWSCLCTRAPP
Trigger: CGGGGGTGCCCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCATTGTCTCCCTGCACTTAGCAGCCCTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR GCA 90 bp TGGGCTTATGTTCTACAGAATGCCTCGAGTAGCTGGAGAGGCTGGGGGATGGCGGGACAGCCCTCACCCTaGCCCTGCTCAAACACCACC +
Preference number: 2 (lower is better)
Translates to: WAYVLQNASSSWRGWGMAGQPSP*PCSNTT
Trigger: GGTGGTGTTTGAGCAGGGGCAGGGTGAGGGCTGTCC...CGCCATCCCCCAGCCTCTCCAGCTACTCGAGGCATTCTGTAGAACATAAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 90 bp GTACACACTGAGTGGAGGCGGATCCCGTGCGCCTGCAACTTGTCCTaGCCTCCCTGCTCTCTGTCCAACAGCACTATGGCATCAGTGACC +
Preference number: 2 (lower is better)
Translates to: VHTEWRRIPCACNLS*PPCSLSNSTMASVT
Trigger: GGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCACTCAGTGTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp GGGGATGGCGTTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGAGTGTGCTGGTGCAATaGGCACCGGGACAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: GDGVLHSISLTDILCTPWSVLVQ*APGQPS
Trigger: TGAGGGCTGTCCCGGTGCTCATTGCACCAGCACACT...CCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAACGCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 90 bp ATGTGGTGGCAGAAGCCAGAGAGGGGTGAGCAGAAACACGAGAGTTaGGGTTCAGGCTCGGAACTGGTACTGAGTGACTCCCACCCACCG +
Preference number: 2 (lower is better)
Translates to: MWWQKPERGEQKHES*GSGSELVLSDSHPP
Trigger: CGGTGGGTGGGAGTCACTCAGTACCAGTTCCGAGCCTGAACCCAAACTCTCGTGTTTCTGCTCACCCCTCTCTGGCTTCTGCCACCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGAATGTACACACTGAGTaGAGGCGGATCCCGTGCGCC +
Preference number: 2 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSNVHTE*RRIPCA
Trigger: GGCGCACGGGATCCGCCTCCACTCAGTGTGTACATT...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CAA 90 bp GACAATGTACACACTGAGTGGAGGCGGATCCCGTGCGCCTGCAACTaGTCCTTGCCTCCCTGCTCTCTGTCCAACAGCACTATGGCATCA +
Preference number: 2 (lower is better)
Translates to: DNVHTEWRRIPCACN*SLPPCSLSNSTMAS
Trigger: TGATGCCATAGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCACTCAGTGTGTACATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGGAGCCTGGCACCACGTaGGCATTTACTAGATCTGCC +
Preference number: 2 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSEPGTT*AFTRSA
Trigger: GGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTC...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR GCA 90 bp CATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGCCTGCAACTTGTCCTTaGCTCCCTGCTCTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: HFRNKEAPPMQRQAHFLQPATCP*LPALCP
Trigger: TGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGG...CTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
3UTR-3UTR CCA 90 bp ACTGACTGTCCTTACCTGACGATTGAGACTCTCAGGCCCACCAGGTCTGCTTCTAGCACCCTCTGCTGTTaGCTCTCCTGTGGCTGCACC +
Preference number: 2 (lower is better)
Translates to: TDCPYLTIETLRPTRSASSTLCC*LSCGCT
Trigger: GGTGCAGCCACAGGAGAGCCAACAGCAGAGGGTGCT...AGAAGCAGACCTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 90 bp CTGAGGGCCAACTCCCTTCCTGCTCCTTCTGTGGCCACTTCTTCCTaGAGAGTTGGTCTCTCCCACAGACAGCATTTCCCTGGAGATGCA +
Preference number: 2 (lower is better)
Translates to: LRANSLPAPSVATSS*RVGLSHRQHFPGDA
Trigger: TGCATCTCCAGGGAAATGCTGTCTGTGGGAGAGACCAACTCTCAAGGAAGAAGTGGCCACAGAAGGAGCAGGAAGGGAGTTGGCCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR TCA 90 bp GGTTGTCCTCATGAGAACCTTGGTTGTGCGGCCCGTCCACTTCCCACTGACTGTAAGTGGGAGAACCACTaGCACATGGAAGTGACAGCC +
Preference number: 2 (lower is better)
Translates to: GCPHENLGCAARPLPTDCKWENH*HMEVTA
Trigger: GGCTGTCACTTCCATGTGTCAGTGGTTCTCCCACTT...ACAGTCAGTGGGAAGTGGACGGGCCGCACAACCAAGGTTCTCATGAGGACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR TCA 90 bp ATGCAGTGTTGGGACATTGGAGGCAGGACTATGGAGCTGTCTGTGCACAAGGGCCACACTGAGTCACAGTaGGAACCTCCTCCACCGTCT +
Preference number: 2 (lower is better)
Translates to: MQCWDIGGRTMELSVHKGHTESQ*EPPPPS
Trigger: AGACGGTGGAGGAGGTTCTCACTGTGACTCAGTGTG...GCCCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR GCA 90 bp CAGACAGCATTTCCCTGGAGATGCAGCACTGGGGACATGAAGCCCAAATTGGACTCCTGTGCCACTTCCTaGAGGTGGGCCCCAAATGAG +
Preference number: 2 (lower is better)
Translates to: QTAFPWRCSTGDMKPKLDSCATS*RWAPNE
Trigger: CTCATTTGGGGCCCACCTGCAGGAAGTGGCACAGGA...GTCCAATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAGGGAAATGCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp CTCAGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTCTTACACAGGCCCTGTaGAAGAATCCAAGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: LSHSNRCSSVVPSGQGAGLTQAL*KNPSRN
Trigger: ATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAG...ACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR TCA 90 bp GTGGATCCTGGGCAGCTCTGCACGTGCACCGAAGCTGAGTTCTTTGGGTGCTTCTTCAAGCCCTCCTTCTaGAGAACCTCAACAGTTTCC +
Preference number: 2 (lower is better)
Translates to: VDPGQLCTCTEAEFFGCFFKPSF*RTSTVS
Trigger: GGAAACTGTTGAGGTTCTTCAGAAGGAGGGCTTGAA...GAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp ATGCAGTGTTGGGACATTGGAGGCAGGACTATGGAGCTGTCTGTGCACAAGGGCCTCACAGACATTCTGTaGACCCCATGGAGACATGGG +
Preference number: 2 (lower is better)
Translates to: MQCWDIGGRTMELSVHKGLTDIL*TPWRHG
Trigger: CCCATGTCTCCATGGGGTGCACAGAATGTCTGTGAG...GCCCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp CAGGGAGCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACA +
Preference number: 2 (lower is better)
Translates to: QGAGGAHFRNKEAPPMQRKDPQM*KTLTQT
Trigger: TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTT...CCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGCTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR CCA 90 bp CATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACA +
Preference number: 2 (lower is better)
Translates to: HSNRCSSVVPSGQGAGGAKDPQM*KTLTQT
Trigger: TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTT...AGCTCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR CCA 90 bp CTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATCTGCCCAGGATCTGGAAGCTGAGGTaGGAGGATCACCTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: LSQLLSLAPREHLLDLPRIWKLR*EDHLGG
Trigger: ACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGAT...CCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR CCA 90 bp CACAGACCTCCTCTGCTGACAGTTCCCCACCCTTATTTTGGGTGTCAACTGCCCATTCTTCCCATGTGGTaGCAGAAGCCAGAGAGGGGT +
Preference number: 2 (lower is better)
Translates to: HRPPLLTVPHPYFGCQLPILPMW*QKPERG
Trigger: ACCCCTCTCTGGCTTCTGCCACCACATGGGAAGAAT...GGGCAGTTGACACCCAAAATAAGGGTGGGGAACTGTCAGCAGAGGAGGTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 90 bp AGCTACCCAGAGTCAGAAACGCTGCGGGTGGGGCTGGTACCTGTTTaGACAAGACTCCAGGTGACTCTGATACCTGCTAAAGTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: SYPESETLRVGLVPV*TRLQVTLIPAKVGE
Trigger: TTCTCCCACTTTAGCAGGTATCAGAGTCACCTGGAGTCTTGTCAAAACAGGTACCAGCCCCACCCGCAGCGTTTCTGACTCTGGGTAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR TCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGCCCCTCTTTGGAGAGTaGGCAATGGCAGTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLPLFGE*AMAVLG
Trigger: TCCCAGAACTGCCATTGCTCACTCTCCAAAGAGGGG...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR TCA 90 bp ATGCAGTGTTGGGACATTGGAGGCAGGACTATGGAGCTGTCTGTGCACAAGGGCCACTCGAGAGGCTCTTaGGAGCTACTTGAGAGTAGT +
Preference number: 2 (lower is better)
Translates to: MQCWDIGGRTMELSVHKGHSRGS*ELLESS
Trigger: ACTACTCTCAAGTAGCTCTCAAGAGCCTCTCGAGTG...GCCCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp CAGGGAGCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 2 (lower is better)
Translates to: QGAGGAHFRNKEAPPMQRLTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...CCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR TCA 90 bp CATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 2 (lower is better)
Translates to: HFRNKEAPPMQRQAHFLQIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...CTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR TCA 90 bp CTGAAGAACAGCGCTTGTATAGCCCAAGTTCTTCTCTGCCTGAATCAACTTGTCCAGTGGGCCATCAGCTaGCAAGGGTGGGGAAATGGC +
Preference number: 2 (lower is better)
Translates to: LKNSACIAQVLLCLNQLVQWAIS*QGWGNG
Trigger: GCCATTTCCCCACCCTTGTCAGCTGATGGCCCACTG...GACAAGTTGATTCAGGCAGAGAAGAACTTGGGCTATACAAGCGCTGTTCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR GCA 90 bp CACAGACCTCCTCTGCTGACAGTTCCCCACCCTTATTTTGGGTGTCAACTGCCCTGCTCTACTTTCTCTTaGTCTTCAGAAGCCATGGGC +
Preference number: 2 (lower is better)
Translates to: HRPPLLTVPHPYFGCQLPCSTFS*SSEAMG
Trigger: GCCCATGGCTTCTGAAGAGCAAGAGAAAGTAGAGCA...GGGCAGTTGACACCCAAAATAAGGGTGGGGAACTGTCAGCAGAGGAGGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR GCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACACCTGAGAAGCTTCGATaGAACTGGGTGGATCCTGGG +
Preference number: 2 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTPEKLR*NWVDPG
Trigger: CCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGG...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAATCTGGAAGCTGAGGTaGGAGGATCACCTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTIWKLR*EDHLGG
Trigger: ACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGAT...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp GGGCAAAGGAACCAAGCTGCAGAGAGTCCACAGGGTTACTCATGGTCATTTTCACAGACAGCATTTCCCTaGAGATGCAGCACTGGGGAC +
Preference number: 2 (lower is better)
Translates to: GQRNQAAESPQGYSWSFSQTAFP*RCSTGD
Trigger: GTCCCCAGTGCTGCATCTCCAGGGAAATGCTGTCTG...TGAAAATGACCATGAGTAACCCTGTGGACTCTCTGCAGCTTGGTTCCTTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp CACAGACCTCCTCTGCTGACAGTTCCCCACCCTTATTTTGGGTGTCAACTGCCCGGCTTACAGATCAGCTaGGGCTTTCATACATTGGAC +
Preference number: 2 (lower is better)
Translates to: HRPPLLTVPHPYFGCQLPGLQIS*GFHTLD
Trigger: GTCCAATGTATGAAAGCCCCAGCTGATCTGTAAGCC...GGGCAGTTGACACCCAAAATAAGGGTGGGGAACTGTCAGCAGAGGAGGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp CTGTCTGTGCACAAGGGCACCCCCGAAGACATGGTTGTCCTCATGAGAACCTTGAAGACTGGTTCCTGGTaGAGCCCAGTTTTTGTCTTC +
Preference number: 2 (lower is better)
Translates to: LSVHKGTPEDMVVLMRTLKTGSW*SPVFVF
Trigger: GAAGACAAAAACTGGGCTCCACCAGGAACCAGTCTT...CAAGGTTCTCATGAGGACAACCATGTCTTCGGGGGTGCCCTTGTGCACAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR TCA 90 bp CCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: PSLLKYASQAAFLYISAAGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...AGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGCACTATGGCATCAGTaGCCTTCAAGCCCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTALWHQ*PSSPPS
Trigger: AGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGC...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp GATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCGGACAATGTACACACTaGGTGGAGGCGGATCCCGTG +
Preference number: 2 (lower is better)
Translates to: DIGTSFANNFLWAIVLLAGQCTH*VEADPV
Trigger: CACGGGATCCGCCTCCACTCAGTGTGTACATTGTCC...GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp CTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCAGAGGACAATGTACACACTaGGTGGAGGCGGATCCCGTG +
Preference number: 2 (lower is better)
Translates to: LLKYASQAAFLYISAASRGQCTH*VEADPV
Trigger: CACGGGATCCGCCTCCACTCAGTGTGTACATTGTCC...TCTGGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp ACTGACTGTCCTTACCTGACGATTGAGACTCTCAGGCCCACCAGGTCTGCTTCTGCCCAAGTTCTTCTCTaGCTGAATCAACTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: TDCPYLTIETLRPTRSASAQVLL*LNQLVL
Trigger: GAGGACAAGTTGATTCAGGCAGAGAAGAACTTGGGC...AGAAGCAGACCTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR GCA 90 bp GATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACCGGATCCCGTGCGCCTaGAACTTGTCCTTGCCTCCC +
Preference number: 2 (lower is better)
Translates to: DYFQPVTFRRTTYLQCLHRIPCA*NLSLPP
Trigger: GGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCG...GTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp TCAAGAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGCGGATCCCGTGCGCCTaGAACTTGTCCTTGCCTCCC +
Preference number: 2 (lower is better)
Translates to: SRTHGILPELSTPSSHPERIPCA*NLSLPP
Trigger: GGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCG...CTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp ATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAGATCCTGGGCAGCTCTaGACGTGCACCGAAGCTGAG +
Preference number: 2 (lower is better)
Translates to: ISEPRLPITSCGLLYCWPDPGQL*TCTEAE
Trigger: CTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATC...TGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp GGTTGTCCTCATGAGAACCTTGGTTGTGCGGCCCGTCCACTTCCCACTGACTGTCTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 2 (lower is better)
Translates to: GCPHENLGCAARPLPTDCLTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...ACAGTCAGTGGGAAGTGGACGGGCCGCACAACCAAGGTTCTCATGAGGACAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp GGGCAAAGGAACCAAGCTGCAGAGAGTCCACAGGGTTACTCATGGTCATTTTCACCACCTTCCCCTCTTTaGAGAGTGAGCAATGGCAGT +
Preference number: 2 (lower is better)
Translates to: GQRNQAAESPQGYSWSFSPPSPL*RVSNGS
Trigger: ACTGCCATTGCTCACTCTCCAAAGAGGGGAAGGTGG...TGAAAATGACCATGAGTAACCCTGTGGACTCTCTGCAGCTTGGTTCCTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp CTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCAGAAATGTACACACTGAGTaGAGGCGGATCCCGTGCGCC +
Preference number: 2 (lower is better)
Translates to: LLKYASQAAFLYISAASRNVHTE*RRIPCA
Trigger: GGCGCACGGGATCCGCCTCCACTCAGTGTGTACATT...TCTGGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp TCTGAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCCAACTGGGTGGATCCTaGGCAGCTCTGCACGTGCAC +
Preference number: 2 (lower is better)
Translates to: SEALKHQVYSNTLPKQLFQLGGS*AALHVH
Trigger: GTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTG...GAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp CACAGACCTCCTCTGCTGACAGTTCCCCACCCTTATTTTGGGTGTCAACTGCCCATATCACTCCAACACTaGAGACACCTAAGAGATTCC +
Preference number: 2 (lower is better)
Translates to: HRPPLLTVPHPYFGCQLPISLQH*RHLRDS
Trigger: GGAATCTCTTAGGTGTCTTCAGTGTTGGAGTGATAT...GGGCAGTTGACACCCAAAATAAGGGTGGGGAACTGTCAGCAGAGGAGGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR TCA 90 bp GGTTGTCCTCATGAGAACCTTGGTTGTGCGGCCCGTCCACTTCCCACTGACTGTAATGTGAATAACCAGTaGAGTGGTTCTCAAAGTCCA +
Preference number: 2 (lower is better)
Translates to: GCPHENLGCAARPLPTDCNVNNQ*SGSQSP
Trigger: TGGACTTTGAGAACCACTTCACTGGTTATTCACATT...ACAGTCAGTGGGAAGTGGACGGGCCGCACAACCAAGGTTCTCATGAGGACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR GCA 90 bp TCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGGAGGCGGATCCCGTaGGCCTGCAACTTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: SNTKSTQIRFPSSFSVHLWRRIP*ACNLSL
Trigger: CAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCA...GAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp CTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCAGAGGGCAGCTCTGCACGTaGACCGAAGCTGAGTTCTTT +
Preference number: 2 (lower is better)
Translates to: LLKYASQAAFLYISAASRGQLCT*TEAEFF
Trigger: AAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCC...TCTGGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGGAACTCATGGCATTTTaGCAGAGTTATCAACTCCTT +
Preference number: 2 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSELMAF*QSYQLL
Trigger: AAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp TGTGAAATAGGGTTCATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGACTTACACAGGCCCTGTaGAAGAATCCAAGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: CEIGFINRNSACVLEMAGLTQAL*KNPSRN
Trigger: ATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAG...TCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGATGAACCCTATTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp GGTTGTCCTCATGAGAACCTTGGTTGTGCGGCCCGTCCACTTCCCACTGACTGTATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 2 (lower is better)
Translates to: GCPHENLGCAARPLPTDCIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...ACAGTCAGTGGGAAGTGGACGGGCCGCACAACCAAGGTTCTCATGAGGACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp AGTCTAGTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCGAGCAATGGCAGTTCTaGGAACCAGCCCATGTGGAT +
Preference number: 2 (lower is better)
Translates to: SLVPWRDRKDPQMWKTLTEQWQF*EPAHVD
Trigger: ATCCACATGGGCTGGTTCCCAGAACTGCCATTGCTC...GGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGACTAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp CTGTCTGTGCACAAGGGCACCCCCGAAGACATGGTTGTCCTCATGAGAACCTTGTCTACTAATGACCGTTaGGACAATTATGTGGGATCC +
Preference number: 2 (lower is better)
Translates to: LSVHKGTPEDMVVLMRTLSTNDR*DNYVGS
Trigger: GGATCCCACATAATTGTCCCAACGGTCATTAGTAGA...CAAGGTTCTCATGAGGACAACCATGTCTTCGGGGGTGCCCTTGTGCACAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp CTTGCAGGCCTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATTATCACTTGAGCTCCTaGATCCAACCACGCTTGACA +
Preference number: 2 (lower is better)
Translates to: LAGLSQLLSLAPREHLLDYHLSS*IQPRLT
Trigger: TGTCAAGCGTGGTTGGATCCAGGAGCTCAAGTGATA...ATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAGGCCTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479719.5
3UTR-3UTR TCA 90 bp TATGCCACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: YATTYNDDIGTSFANNFLGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...CAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp TCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: SNTKSTQIRFPSSFSVHLGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...GAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTGCACTATGGCATCAGTaGCCTTCAAGCCCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIIALWHQ*PSSPPS
Trigger: AGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGC...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp ACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGAGCCTGGCACCACGTaGGCATTTACTAGATCTGCC +
Preference number: 2 (lower is better)
Translates to: TPSLLKYASQAAFLYISAEPGTT*AFTRSA
Trigger: GGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTC...AGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR GCA 90 bp ATGCAGTGTTGGGACATTGGAGGCAGGACTATGGAGCTGTCTGTGCACAAGGGCTGGAACTCCATGGCATaGACTACTAAGCATTTATCA +
Preference number: 2 (lower is better)
Translates to: MQCWDIGGRTMELSVHKGWNSMA*TTKHLS
Trigger: TGATAAATGCTTAGTAGTGCATGCCATGGAGTTCCA...GCCCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR GCA 90 bp AGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCTTGTCCTTGCCTCCCTaGTCTCTGTCCAACAGCACT +
Preference number: 2 (lower is better)
Translates to: SLLKYASQAAFLYISAASLSLPP*SLSNST
Trigger: AGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAA...GGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGGCTGAGTTCTTTGGGTaGTTCCTTTATAGAAAGGGG +
Preference number: 2 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLAEFFG*FLYRKG
Trigger: CCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGC...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp ACCAACAACAAATTCAGAGTGCTCCTCAGCCATTCTAACCGCTGCTCTAGTGTAGCTGCAACAGCTCTCTaGCCAGTGAAACATCAGCAG +
Preference number: 2 (lower is better)
Translates to: TNNKFRVLLSHSNRCSSVAATAL*PVKHQQ
Trigger: CTGCTGATGTTTCACTGGCCAGAGAGCTGTTGCAGC...TACACTAGAGCAGCGGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
3UTR-3UTR CCA 90 bp ATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGGCTGCAACAGCTCTCTaGCCAGTGAAACATCAGCAG +
Preference number: 2 (lower is better)
Translates to: IGTSFANNFLWAIVLLAKAATAL*PVKHQQ
Trigger: CTGCTGATGTTTCACTGGCCAGAGAGCTGTTGCAGC...CTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CAA 90 bp ACAGCATTTCCCTGGAGATGCAGCACTGGGGACATGAAGCCCAAATaGGACTTTAGAGCAGAAGCTCTTGAAGTAAAAACTTCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: TAFPWRCSTGDMKPK*DFRAEALEVKTSGG
Trigger: CCCTCCTGAAGTTTTTACTTCAAGAGCTTCTGCTCTAAAGTCCAATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAGGGAAATGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR TCA 90 bp TTGGATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: LDYFQPVTFRRTTYLQCLGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...AAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp ACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: TYNDDIGTSFANNFLWAIGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...AATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp CTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATCTGCCCAGGACAAAGACATTCTCCTaGATAAACCTCTTCACTCTC +
Preference number: 2 (lower is better)
Translates to: LSQLLSLAPREHLLDLPRTKTFS*INLFTL
Trigger: GAGAGTGAAGAGGTTTATTCAGGAGAATGTCTTTGT...CCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
3UTR-3UTR TCA 90 bp AAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACACGTGCACCGAAGCTaGGTTCTTTGGGTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: KHSNTKSTQIRFPSSFSVHVHRS*VLWVLP
Trigger: AGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTG...TACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp TCAAGAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGCCTGCAACTTGTCCTTaGCTCCCTGCTCTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: SRTHGILPELSTPSSHPEPATCP*LPALCP
Trigger: TGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGG...CTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAAAGATTATCTCCTCCTaGTTCCAACTGAACTCCTGG +
Preference number: 2 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTKIISS*FQLNSW
Trigger: CCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTT...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR CCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACA +
Preference number: 2 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTKDPQM*KTLTQT
Trigger: TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTT...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp GGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTGGATCCTAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACA +
Preference number: 2 (lower is better)
Translates to: GLLLLHKPEKLRCNWVDPKDPQM*KTLTQT
Trigger: TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTT...AGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp AAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTATTCGATGCAACTGGGTaGATCCTGGGCAGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: KHSNTKSTQIRFPSSFSVFDATG*ILGSSA
Trigger: TGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAA...TACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp GAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTGCTGCAACAGCTCTCTaGCCAGTGAAACATCAGCAG +
Preference number: 2 (lower is better)
Translates to: EALKHQVYSNTLPKQLFCAATAL*PVKHQQ
Trigger: CTGCTGATGTTTCACTGGCCAGAGAGCTGTTGCAGC...ACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCC +
Preference number: 2 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTANNFL*AIVLLA
Trigger: GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGC...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR CAA 90 bp TGCAACAGCTCTCTGGCCAGTGAAACATCAGCAGATAGACACAGATaGGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACT +
Preference number: 2 (lower is better)
Translates to: CNSSLASETSADRHR*VSFFCISLRSFDAT
Trigger: AGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAATCTGTGTCTATCTGCTGATGTTTCACTGGCCAGAGAGCTGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTAGCACTATGGCATCAGTaGCCTTCAAGCCCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLALWHQ*PSSPPS
Trigger: AGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGC...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp CTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCAGAAGGGGAGAACCATTATaGTTCGCTGCCACAAAGACA +
Preference number: 2 (lower is better)
Translates to: LLKYASQAAFLYISAASRRGEPL*FAATKT
Trigger: TGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCT...TCTGGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp CTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATCTGCCCAGGTTTAAAGATACCTCCTaGGAAAGAAGTCAACAGAGA +
Preference number: 2 (lower is better)
Translates to: LSQLLSLAPREHLLDLPRFKDTS*ERSQQR
Trigger: TCTCTGTTGACTTCTTTCTCAGGAGGTATCTTTAAA...CCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479719.5
3UTR-3UTR GCA 90 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATACGGATCCCGTGCGCCTaGAACTTGTCCTTGCCTCCC +
Preference number: 2 (lower is better)
Translates to: SSLQIIKKFRWTWWCMPIRIPCA*NLSLPP
Trigger: GGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCG...TATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp AGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCCTTACACAGGCCCTGTaGAAGAATCCAAGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: SLLKYASQAAFLYISAASLTQAL*KNPSRN
Trigger: ATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAG...GGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp TTGGATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTATCTGGAAGCTGAGGTaGGAGGATCACCTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: LDYFQPVTFRRTTYLQCLIWKLR*EDHLGG
Trigger: ACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGAT...AAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 2 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp TGGAGTCAAGTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAAAAGCTTCGATGCAACTaGGTGGATCCTGGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: WSQVKKFWFHAYSGARNKKLRCN*VDPGQL
Trigger: GAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTT...TTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTGACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
3UTR-3UTR TCA 90 bp CTGAAGAACAGCGCTTGTATAGCCCAAGTTCTTCTCTGCCTGAATCAACTTGTCGCTCAAACACCACCTTaGATGTGGGCTTTCTCTTTA +
Preference number: 2 (lower is better)
Translates to: LKNSACIAQVLLCLNQLVAQTPP*MWAFSL
Trigger: TAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGC...GACAAGTTGATTCAGGCAGAGAAGAACTTGGGCTATACAAGCGCTGTTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR TCA 90 bp ATCTCTGCTGCTTCCAGACGATCAGCTGCTGAGATTATGCCACGACCTACAATGACAAAGACATTCTCCTaGATAAACCTCTTCACTCTC +
Preference number: 2 (lower is better)
Translates to: ISAASRRSAAEIMPRPTMTKTFS*INLFTL
Trigger: GAGAGTGAAGAGGTTTATTCAGGAGAATGTCTTTGT...CATTGTAGGTCGTGGCATAATCTCAGCAGCTGATCGTCTGGAAGCAGCAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp GAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTAGGGGAGAACCATTATaGTTCGCTGCCACAAAGACA +
Preference number: 2 (lower is better)
Translates to: EALKHQVYSNTLPKQLFCRGEPL*FAATKT
Trigger: TGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCT...ACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCACACGTGCACCGAAGCTaGGTTCTTTGGGTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPHVHRS*VLWVLP
Trigger: AGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTG...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp TTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCAAATACGTGGAGGCGGATCCCGTaGGCCTGCAACTTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: LYLKNVSEALKHQVYSNTWRRIP*ACNLSL
Trigger: CAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCA...CGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTGGGCAGCTCTGCACGTaGACCGAAGCTGAGTTCTTT +
Preference number: 2 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPGQLCT*TEAEFF
Trigger: AAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCC...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp TTCACATTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCAGATCCTGGGCAGCTCTaGACGTGCACCGAAGCTGAG +
Preference number: 2 (lower is better)
Translates to: FTLYLKNVSEALKHQVYSDPGQL*TCTEAE
Trigger: CTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATC...TGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAATGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp AGTCTAGTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCTTGGTCTCCTTCTTTTaGATAAGCCTGAGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: SLVPWRDRKDPQMWKTLTLVSFF*ISLRSF
Trigger: GAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAA...GGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGACTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp TCAAGAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGAAAGCATCTGCTAGCTaGAACAGCTCTCTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: SRTHGILPELSTPSSHPEKASAS*NSSLAS
Trigger: ACTGGCCAGAGAGCTGTTGCAGCTAGCAGATGCTTT...CTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp ATCTCTGCTGCTTCCAGACGATCAGCTGCTGAGATTATGCCACGACCTACAATGGAACTCATGGCATTTTaGCAGAGTTATCAACTCCTT +
Preference number: 2 (lower is better)
Translates to: ISAASRRSAAEIMPRPTMELMAF*QSYQLL
Trigger: AAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC...CATTGTAGGTCGTGGCATAATCTCAGCAGCTGATCGTCTGGAAGCAGCAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp GGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTGGATCCTGAATCTCCAGCATTTTaGACAATGTACACACTGAGT +
Preference number: 2 (lower is better)
Translates to: GLLLLHKPEKLRCNWVDPESPAF*TMYTLS
Trigger: ACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTC...AGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CAA 90 bp ACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTaGTGGGCTATTGTACTGTTGGCCAAGATTATCTCCTCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: TTYNDDIGTSFANNF*WAIVLLAKIISSCF
Trigger: GAAGCAGGAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR TCA 90 bp TATGCCACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTTCAAGCCCTCCTTCTaGAGAACCTCAACAGTTTCC +
Preference number: 2 (lower is better)
Translates to: YATTYNDDIGTSFANNFLFKPSF*RTSTVS
Trigger: GGAAACTGTTGAGGTTCTTCAGAAGGAGGGCTTGAA...CAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp AAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTATTCAAGCCCTCCTTCTaGAGAACCTCAACAGTTTCC +
Preference number: 2 (lower is better)
Translates to: KHSNTKSTQIRFPSSFSVFKPSF*RTSTVS
Trigger: GGAAACTGTTGAGGTTCTTCAGAAGGAGGGCTTGAA...TACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGGACAATGTACACACTaGGTGGAGGCGGATCCCGTG +
Preference number: 2 (lower is better)
Translates to: SSLQIIKKFRWTWWCMPIGQCTH*VEADPV
Trigger: CACGGGATCCGCCTCCACTCAGTGTGTACATTGTCC...TATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp ATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAGCTGAGTTCTTTGGGTaGTTCCTTTATAGAAAGGGG +
Preference number: 2 (lower is better)
Translates to: ISEPRLPITSCGLLYCWPAEFFG*FLYRKG
Trigger: CCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGC...TGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAAGGGCAGCTCTGCACGTaGACCGAAGCTGAGTTCTTT +
Preference number: 2 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKGQLCT*TEAEFF
Trigger: AAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCC...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp GTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAAACCAACAACAAAGCATCTGCTAGCTaGAACAGCTCTCTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: VKKFWFHAYSGARNKTNNKASAS*NSSLAS
Trigger: ACTGGCCAGAGAGCTGTTGCAGCTAGCAGATGCTTT...GTTGTTGGTTTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
3UTR-3UTR GCA 90 bp CCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTACAACAAATTCAGAGTaGTCCTCAGCCATTCTAACC +
Preference number: 2 (lower is better)
Translates to: PSLLKYASQAAFLYISAATTNSE*SSAILT
Trigger: GGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGT...AGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR GCA 90 bp GAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTAAGATTATCTCCTCCTaGTTCCAACTGAACTCCTGG +
Preference number: 2 (lower is better)
Translates to: EALKHQVYSNTLPKQLFCKIISS*FQLNSW
Trigger: CCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTT...ACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR CCA 90 bp AAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTTACACAGGCCCTGTaGAAGAATCCAAGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: KHQVYSNTLPKQLFCTSLLTQAL*KNPSRN
Trigger: ATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAG...CAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp AAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACTTACACAGGCCCTGTaGAAGAATCCAAGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: KHSNTKSTQIRFPSSFSVLTQAL*KNPSRN
Trigger: ATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAG...TACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp ACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACA +
Preference number: 2 (lower is better)
Translates to: TPSLLKYASQAAFLYISAKDPQM*KTLTQT
Trigger: TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTT...AGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp ATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGCTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 2 (lower is better)
Translates to: IGTSFANNFLWAIVLLAKLTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...CTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp ATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGGGGCTATTGTACTGTTaGCCAAGATTATCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: IGTSFANNFLWAIVLLAKGLLYC*PRLSPS
Trigger: TGAAGGAGATAATCTTGGCCAACAGTACAATAGCCC...CTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497791.5
3UTR CAA 90 bp GCTGAGATTATGCCACGACCTACAATGATGATATCGGAACCTCGTTaGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTA +
Preference number: 2 (lower is better)
Translates to: AEIMPRPTMMISEPR*PITSCGLLYCWPRL
Trigger: TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCATAATCTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp GATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 2 (lower is better)
Translates to: DYFQPVTFRRTTYLQCLHIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...GTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp AATGCGGTGATTACAAATTACTCAATATTTCCTAAAGACCATGAGAACTCCAGACCTGCAACTTGTCCTTaGCTCCCTGCTCTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: NAVITNYSIFPKDHENSRPATCP*LPALCP
Trigger: TGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGG...TCTGGAGTTCTCATGGTCTTTAGGAAATATTGAGTAATTTGTAATCACCGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp TTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCAAATACGATCTGGAAGCTGAGGTaGGAGGATCACCTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: LYLKNVSEALKHQVYSNTIWKLR*EDHLGG
Trigger: ACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGAT...CGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp TTCACATTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCAATCTGGAAGCTGAGGTaGGAGGATCACCTGGGAGGT +
Preference number: 2 (lower is better)
Translates to: FTLYLKNVSEALKHQVYSIWKLR*EDHLGG
Trigger: ACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGAT...TGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAATGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCATTGGAGAGTGAGCAATaGCAGTTCTGGGAACCAGCC +
Preference number: 2 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIALESEQ*QFWEPA
Trigger: GGCTGGTTCCCAGAACTGCCATTGCTCACTCTCCAA...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATATTCGATGCAACTGGGTaGATCCTGGGCAGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: SSLQIIKKFRWTWWCMPIFDATG*ILGSSA
Trigger: TGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAA...TATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp TTCACATTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCAAAGCTTCGATGCAACTaGGTGGATCCTGGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: FTLYLKNVSEALKHQVYSKLRCN*VDPGQL
Trigger: GAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTT...TGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAATGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CAA 90 bp ACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTaGTGGGCTATTGTACTGTTGGCCAAGATTATCTCCTTCATACTG +
Preference number: 2 (lower is better)
Translates to: TTYNDDIGTSFANNF*WAIVLLAKIISFIL
Trigger: CAGTATGAAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497791.5
3UTR-3UTR TCA 90 bp TTGGATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 2 (lower is better)
Translates to: LDYFQPVTFRRTTYLQCLIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...AAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp AGAAAGGGGAGAACCATTATGATTCGCTGCCACAAAGACATTCTCCTGAATAAAATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 2 (lower is better)
Translates to: RKGRTIMIRCHKDILLNKIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...TTTATTCAGGAGAATGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp TATGCCACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGGTCAAAACTGATGCCTaGATTTTGGGCAGTTTGGAA +
Preference number: 2 (lower is better)
Translates to: YATTYNDDIGTSFANNFLVKTDA*ILGSLE
Trigger: TTCCAAACTGCCCAAAATGCAGGCATCAGTTTTGAC...CAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467167.5
3UTR-3UTR GCA 90 bp AAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTATTGGTCTCCTTCTTTTaGATAAGCCTGAGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: KHSNTKSTQIRFPSSFSVLVSFF*ISLRSF
Trigger: GAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAA...TACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTATTGGTCTCCTTCTTTTaGATAAGCCTGAGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLLVSFF*ISLRSF
Trigger: GAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAA...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp ATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGTGTGTTTCCTATATCTaGAAACTTCCGGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: IGTSFANNFLWAIVLLAKCVSYI*KLPVFK
Trigger: TTTGAAGACCGGAAGTTTGCAGATATAGGAAACACA...CTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp AACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 2 (lower is better)
Translates to: NTKSTQIRFPSSFSVHLCIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...GCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp ATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 2 (lower is better)
Translates to: ISEPRLPITSCGLLYCWPIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...TGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp CAAGATTATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 2 (lower is better)
Translates to: QDYLLLLPTELLESSEEILTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...AATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR CCA 90 bp CAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTCTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 2 (lower is better)
Translates to: QTPSLLKYASQAAFLYISLTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...AGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp GAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTGAATCTCCAGCATTTTaGACAATGTACACACTGAGT +
Preference number: 2 (lower is better)
Translates to: EALKHQVYSNTLPKQLFCESPAF*TMYTLS
Trigger: ACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTC...ACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 2 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR TCA 90 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAACACGGTGTCAAAACTaGTGCCTGCATTTTGGGCAG +
Preference number: 2 (lower is better)
Translates to: SSLQIIKKFRWTWWCMPITRCQN*CLHFGQ
Trigger: CTGCCCAAAATGCAGGCATCAGTTTTGACACCGTGT...TATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467167.5
3UTR-3UTR GCA 90 bp GATTATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGTGTGTTTCCTATATCTaGAAACTTCCGGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: DYLLLLPTELLESSEEILCVSYI*KLPVFK
Trigger: TTTGAAGACCGGAAGTTTGCAGATATAGGAAACACA...CAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
3UTR-3UTR CCA 90 bp AAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTAATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 2 (lower is better)
Translates to: KHSNTKSTQIRFPSSFSVIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...TACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp CAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGAATCTCCAGCATTTTaGACAATGTACACACTGAGT +
Preference number: 2 (lower is better)
Translates to: QTPSLLKYASQAAFLYISESPAF*TMYTLS
Trigger: ACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTC...AGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp AGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCAATATCAAGAACTCATaGCATTTTGCCAGAGTTATC +
Preference number: 2 (lower is better)
Translates to: SLLKYASQAAFLYISAASNIKNS*HFARVI
Trigger: GATAACTCTGGCAAAATGCCATGAGTTCTTGATATT...GGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCC +
Preference number: 2 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPANNFL*AIVLLA
Trigger: GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGC...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR CAA 90 bp ATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATaGTACTGTTGGCCAAGATTATCTCCTTCATACTGCTTTTTCACT +
Preference number: 2 (lower is better)
Translates to: MMISEPRLPITSCGL*YCWPRLSPSYCFFT
Trigger: AGTGAAAAAGCAGTATGAAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497791.5
3UTR-3UTR GCA 90 bp GTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAAACCAACAACGAACTCATGGCATTTTaGCAGAGTTATCAACTCCTT +
Preference number: 2 (lower is better)
Translates to: VKKFWFHAYSGARNKTNNELMAF*QSYQLL
Trigger: AAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC...GTTGTTGGTTTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
3UTR-3UTR CCA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAAAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACA +
Preference number: 2 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKKDPQM*KTLTQT
Trigger: TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTT...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAACTTTTAGGCCAGAGATaGAGGGGAATGGCTAACAAT +
Preference number: 2 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKLLGQR*RGMANN
Trigger: ATTGTTAGCCATTCCCCTCCATCTCTGGCCTAAAAG...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CCA 90 bp CAAGATTATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGATGCCTGCATTTTaGGCAGTTTGGAATAAAATA +
Preference number: 2 (lower is better)
Translates to: QDYLLLLPTELLESSEEILMPAF*AVWNKI
Trigger: TATTTTATTCCAAACTGCCCAAAATGCAGGCATCAG...AATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467167.5
3UTR-3UTR CCA 90 bp AACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCAATATCAAGAACTCATaGCATTTTGCCAGAGTTATC +
Preference number: 2 (lower is better)
Translates to: NTKSTQIRFPSSFSVHLCNIKNS*HFARVI
Trigger: GATAACTCTGGCAAAATGCCATGAGTTCTTGATATT...GCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR-3UTR CCA 90 bp GAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTAATATCAAGAACTCATaGCATTTTGCCAGAGTTATC +
Preference number: 2 (lower is better)
Translates to: EALKHQVYSNTLPKQLFCNIKNS*HFARVI
Trigger: GATAACTCTGGCAAAATGCCATGAGTTCTTGATATT...ACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR CAA 90 bp GACCAGGAGTTACAATGCCCAGAGATCATGTTCTGTAAATATTCCTaGACTGAGAAAGGGTTAAACTATCTAATGCCTCCAAAATACTTC +
Preference number: 2 (lower is better)
Translates to: DQELQCPEIMFCKYS*TEKGLNYLMPPKYF
Trigger: GAAGTATTTTGGAGGCATTAGATAGTTTAACCCTTTCTCAGTCAAGGAATATTTACAGAACATGATCTCTGGGCATTGTAACTCCTGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR GCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCAACAACAAATTCAGAGTaGTCCTCAGCCATTCTAACC +
Preference number: 2 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIATTNSE*SSAILT
Trigger: GGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGT...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR CCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCAATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 2 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCAGAACTCATGGCATTTTaGCAGAGTTATCAACTCCTT +
Preference number: 2 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIAELMAF*QSYQLL
Trigger: AAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR-3UTR GCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCATGTGTTTCCTATATCTaGAAACTTCCGGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPCVSYI*KLPVFK
Trigger: TTTGAAGACCGGAAGTTTGCAGATATAGGAAACACA...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR CCA 72 bp AGAACAGTGGGCCATCAGCTGACAAGGGTGGGGAAATaGCTGATCCTGTGCCACTTCCTGCAGGTGGGCCCC +
Preference number: 3 (lower is better)
Translates to: RTVGHQLTRVGK*LILCHFLQVGP
Trigger: GGGGCCCACCTGCAGGAAGTGGCACAGGATCAGCCATTTCCCCACCCTTGTCAGCTGATGGCCCACTGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CAA 90 bp GGTTGTCCTCATGAGAACCTTGGTTGTGCGGCCCGTCCACTTCCCACTGACTGTCAGCACCCTCTGCTGTaGGCTCTCCTGTGGCTGCAC +
Preference number: 3 (lower is better)
Translates to: GCPHENLGCAARPLPTDCQHPLL*ALLWLH
Trigger: GTGCAGCCACAGGAGAGCCAACAGCAGAGGGTGCTG...ACAGTCAGTGGGAAGTGGACGGGCCGCACAACCAAGGTTCTCATGAGGACAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 72 bp GTGCGGCCCGTCCACTTCCCACTGACTGTCCTTACCTaGCGATTGAGACTCTCAGGCCCACCAGGTCTGCTT +
Preference number: 3 (lower is better)
Translates to: VRPVHFPLTVLT*RLRLSGPPGLL
Trigger: AAGCAGACCTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAGTGGGAAGTGGACGGGCCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 72 bp TGCACAAGGGCACCCCCGAAGACATGGTTGTCCTCATaGGAACCTTGGTTGTGCGGCCCGTCCACTTCCCAC +
Preference number: 3 (lower is better)
Translates to: CTRAPPKTWLSS*EPWLCGPSTSH
Trigger: GTGGGAAGTGGACGGGCCGCACAACCAAGGTTCTCATGAGGACAACCATGTCTTCGGGGGTGCCCTTGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 72 bp AGTGGAGGCGGATCCCGTGCGCCTGCAACTTGTCCTTaGCTCCCTGCTCTCTGTCCAACAGCACTATGGCAT +
Preference number: 3 (lower is better)
Translates to: SGGGSRAPATCP*LPALCPTALWH
Trigger: ATGCCATAGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp GGTTGTCCTCATGAGAACCTTGGTTGTGCGGCCCGTCCACTTCCCACTGACTGTGGAGCCCTCTGCCTCTaGTCTAGAGGAAGACTTTCC +
Preference number: 3 (lower is better)
Translates to: GCPHENLGCAARPLPTDCGALCL*SRGRLS
Trigger: GGAAAGTCTTCCTCTAGACAAGAGGCAGAGGGCTCC...ACAGTCAGTGGGAAGTGGACGGGCCGCACAACCAAGGTTCTCATGAGGACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 72 bp GTTGGGACATTGGAGGCAGGACTATGGAGCTGTCTGTaGACAAGGGCACCCCCGAAGACATGGTTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: VGTLEAGLWSCL*TRAPPKTWLSS
Trigger: TGAGGACAACCATGTCTTCGGGGGTGCCCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 72 bp TCTCACCCTGCAGGGCTGCTAAGTGCAGGGAGACAATaGAGTGTTGGGACATTGGAGGCAGGACTATGGAGC +
Preference number: 3 (lower is better)
Translates to: SHPAGLLSAGRQ*SVGTLEAGLWS
Trigger: GCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCATTGTCTCCCTGCACTTAGCAGCCCTGCAGGGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 72 bp GTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATaGAAAGGCAGGCCCACTTCTTGCAGGCCTTTCACA +
Preference number: 3 (lower is better)
Translates to: VELISAIRRHPR*KGRPTSCRPFT
Trigger: TGTGAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR CCA 72 bp TGCAGGGCTGCTAAGTGCAGGGAGACAATGCAGTGTTaGGACATTGGAGGCAGGACTATGGAGCTGTCTGTG +
Preference number: 3 (lower is better)
Translates to: CRAAKCRETMQC*DIGGRTMELSV
Trigger: CACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCATTGTCTCCCTGCACTTAGCAGCCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp TTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTaGATCCTGGGCAGCTCTGCACGTGCACCGAAGCTG +
Preference number: 3 (lower is better)
Translates to: FCISLRSFDATG*ILGSSARAPKL
Trigger: CAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp GACAAGGGTGGGGAAATGGCTGATCCTGTGCCACTTCCTGCAGGTGGGCCCCAATGCTCAAACACCACCTaGAATGTGGGCTTTCTCTTT +
Preference number: 3 (lower is better)
Translates to: DKGGEMADPVPLPAGGPQCSNTT*NVGFLF
Trigger: AAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCA...TTGGGGCCCACCTGCAGGAAGTGGCACAGGATCAGCCATTTCCCCACCCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CAA 90 bp CTGTCTGTGCACAAGGGCACCCCCGAAGACATGGTTGTCCTCATGAGAACCTTGTTCCCCACCCTTATTTaGGGTGTCAACTGCCCTTCC +
Preference number: 3 (lower is better)
Translates to: LSVHKGTPEDMVVLMRTLFPTLI*GVNCPS
Trigger: GGAAGGGCAGTTGACACCCAAAATAAGGGTGGGGAA...CAAGGTTCTCATGAGGACAACCATGTCTTCGGGGGTGCCCTTGTGCACAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 72 bp ACTCCCTTCCTGCTCCTTCTGTGGCCACTTCTTCCTTaGGAGTTGGTCTCTCCCACAGACAGCATTTCCCTG +
Preference number: 3 (lower is better)
Translates to: TPFLLLLWPLLP*ELVSPTDSISL
Trigger: CAGGGAAATGCTGTCTGTGGGAGAGACCAACTCTCAAGGAAGAAGTGGCCACAGAAGGAGCAGGAAGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 72 bp GTGCACGCCTGTAGTTCCAGCCACTCGAGAGGCTCTTaGGAGCTACTTGAGAGTAGTTCCAGCTACTTGAGC +
Preference number: 3 (lower is better)
Translates to: VHACSSSHSRGS*ELLESSSSYLS
Trigger: GCTCAAGTAGCTGGAACTACTCTCAAGTAGCTCTCAAGAGCCTCTCGAGTGGCTGGAACTACAGGCGTGCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 72 bp AACACGAGAGTTTGGGTTCAGGCTCGGAACTGGTACTaGGTGACTCCCACCCACCGGGTACTTTGGATGAGA +
Preference number: 3 (lower is better)
Translates to: NTRVWVQARNWY*VTPTHRVLWMR
Trigger: TCTCATCCAAAGTACCCGGTGGGTGGGAGTCACTCAGTACCAGTTCCGAGCCTGAACCCAAACTCTCGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 72 bp TATTCTTCCCATGTGGTGGCAGAAGCCAGAGAGGGGTaGGCAGAAACACGAGAGTTTGGGTTCAGGCTCGGA +
Preference number: 3 (lower is better)
Translates to: YSSHVVAEAREG*AETREFGFRLG
Trigger: TCCGAGCCTGAACCCAAACTCTCGTGTTTCTGCTCACCCCTCTCTGGCTTCTGCCACCACATGGGAAGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 72 bp CTCGAGAATCTCCAGCATTTTGGACAATGTACACACTaGGTGGAGGCGGATCCCGTGCGCCTGCAACTTGTC +
Preference number: 3 (lower is better)
Translates to: LENLQHFGQCTH*VEADPVRLQLV
Trigger: GACAAGTTGCAGGCGCACGGGATCCGCCTCCACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CCA 72 bp TCCTGCTCCTTCTGTGGCCACTTCTTCCTTGAGAGTTaGTCTCTCCCACAGACAGCATTTCCCTGGAGATGC +
Preference number: 3 (lower is better)
Translates to: SCSFCGHFFLES*SLPQTAFPWRC
Trigger: GCATCTCCAGGGAAATGCTGTCTGTGGGAGAGACCAACTCTCAAGGAAGAAGTGGCCACAGAAGGAGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp GGTTCATCAACAGGAACAGTGCCTGCGTCCTGGAGATaGCAGGAGCCCACATTTCTAAAGGACAGGAGCATG +
Preference number: 3 (lower is better)
Translates to: GSSTGTVPASWR*QEPTFLKDRSM
Trigger: CATGCTCCTGTCCTTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGATGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp TATGTTCTACAGAATGCCTCGAGTAGCTGGAGAGGCTaGGGGATGGCGTTCTCCACTCCATCAGTCTCACAG +
Preference number: 3 (lower is better)
Translates to: YVLQNASSSWRG*GMAFSTPSVSQ
Trigger: CTGTGAGACTGATGGAGTGGAGAACGCCATCCCCCAGCCTCTCCAGCTACTCGAGGCATTCTGTAGAACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp ATGCAGCCAGAGGTGATGGTTGGGAAGGCAGAAGACTaGTTCCTGGTGGAGCCCAGTTTTTGTCTTCCTGGT +
Preference number: 3 (lower is better)
Translates to: MQPEVMVGKAED*FLVEPSFCLPG
Trigger: ACCAGGAAGACAAAAACTGGGCTCCACCAGGAACCAGTCTTCTGCCTTCCCAACCATCACCTCTGGCTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp CTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTaGGTGGATCCTGGGCAGCTCTGCACGTGCACCGAA +
Preference number: 3 (lower is better)
Translates to: LLLHKPEKLRCN*VDPGQLCTCTE
Trigger: TTCGGTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp AGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAAGAATCTCCAGCATTTaGGACAATGTACACACTGAG +
Preference number: 3 (lower is better)
Translates to: SHSNRCSSVVPSGQGAGGRISSI*DNVHTE
Trigger: CTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCT...TCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
3UTR TCA 72 bp CTCCCTGCTCTCTGTCCAACAGCACTATGGCATCAGTaGCCTTCAAGCCCTCCTTCTGAAGAACCTCAACAG +
Preference number: 3 (lower is better)
Translates to: LPALCPTALWHQ*PSSPPSEEPQQ
Trigger: CTGTTGAGGTTCTTCAGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CCA 72 bp ATGGTGTGGGGCACAAGGACCTACACTTTCAGTAAGTaGCAGGGGCTGGGTGATTATTTGAGCCTCCTCTCA +
Preference number: 3 (lower is better)
Translates to: MVWGTRTYTFSK*QGLGDYLSLLS
Trigger: TGAGAGGAGGCTCAAATAATCACCCAGCCCCTGCCACTTACTGAAAGTGTAGGTCCTTGTGCCCCACACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CAA 90 bp GCTTACCTCCCCTCTACTAATGACCGTTGGGACAATTATGTGGGATCCTTAAGCCCCACCTTCCCCTCTTaGGAGAGTGAGCAATGGCAG +
Preference number: 3 (lower is better)
Translates to: AYLPSTNDRWDNYVGSLSPTFPS*ESEQWQ
Trigger: CTGCCATTGCTCACTCTCCAAAGAGGGGAAGGTGGG...GCTTAAGGATCCCACATAATTGTCCCAACGGTCATTAGTAGAGGGGAGGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CAA 90 bp GGGGATGGCGTTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGGACATGAAGCCCAAATaGGACTTTAGAGCAGAAGCT +
Preference number: 3 (lower is better)
Translates to: GDGVLHSISLTDILCTPWDMKPK*DFRAEA
Trigger: AGCTTCTGCTCTAAAGTCCAATTTGGGCTTCATGTC...CCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAACGCCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CAA 90 bp GATTATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGGCCTGCAACTTGTCCTaGCCTCCCTGCTCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: DYLLLLPTELLESSEEILACNLS*PPCSLS
Trigger: GGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGC...CAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
3UTR-3UTR CAA 90 bp AAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACCGTGCGCCTGCAACTaGTCCTTGCCTCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: KHSNTKSTQIRFPSSFSVPCACN*SLPPCS
Trigger: AGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGG...TACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGATTGGTCTCCTTCTTTaGCATAAGCCTGAGAAGCTT +
Preference number: 3 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSIGLLL*HKPEKL
Trigger: AAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAAT...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp CATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGAGAACTCATGGCATTTaGCCAGAGTTATCAACTCCT +
Preference number: 3 (lower is better)
Translates to: HFRNKEAPPMQRQAHFLQRTHGI*PELSTP
Trigger: AGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCT...CTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
3UTR TCA 72 bp GCTCTTGAGAGCTACTTGAGAGTAGTTCCAGCTACTTaGGCGGATCGCTTGAGCCCAAGTCAAGGTTGCAGT +
Preference number: 3 (lower is better)
Translates to: ALESYLRVVPAT*ADRLSPSQGCS
Trigger: ACTGCAACCTTGACTTGGGCTCAAGCGATCCGCTCAAGTAGCTGGAACTACTCTCAAGTAGCTCTCAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR GCA 72 bp ATACAATCATTTCAGGATCCTCCCCAAGTCTCACCCTaGAGGGCTGCTAAGTGCAGGGAGACAATGCAGTGT +
Preference number: 3 (lower is better)
Translates to: IQSFQDPPQVSP*RAAKCRETMQC
Trigger: ACACTGCATTGTCTCCCTGCACTTAGCAGCCCTGCAGGGTGAGACTTGGGGAGGATCCTGAAATGATTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp CTAGTCCCATGGAGAGATAGGAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACAGGACTGTGGCTGTCT +
Preference number: 3 (lower is better)
Translates to: LVPWRDRKDPQM*KTLTQTGLWLS
Trigger: AGACAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR CCA 72 bp AGAGTGAGCAATGGCAGTTCTGGGAACCAGCCCATGTaGATACCTGGACTATCACTTTTAGGCCAGAGATGG +
Preference number: 3 (lower is better)
Translates to: RVSNGSSGNQPM*IPGLSLLGQRW
Trigger: CCATCTCTGGCCTAAAAGTGATAGTCCAGGTATCCACATGGGCTGGTTCCCAGAACTGCCATTGCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 72 bp CTCATTTCCCCTCAAATCACCTTAGCAGGGGTCCTGTaGAATAGGGTTCATCAACAGGAACAGTGCCTGCGT +
Preference number: 3 (lower is better)
Translates to: LISPQITLAGVL*NRVHQQEQCLR
Trigger: ACGCAGGCACTGTTCCTGTTGATGAACCCTATTTCACAGGACCCCTGCTAAGGTGATTTGAGGGGAAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 72 bp GCTGGGCAAACCACAAATCTGCTAACGCAGAAACTCTaGTGGTGTGGGGCACAAGGACCTACACTTTCAGTA +
Preference number: 3 (lower is better)
Translates to: AGQTTNLLTQKL*WCGAQGPTLSV
Trigger: TACTGAAAGTGTAGGTCCTTGTGCCCCACACCATCAGAGTTTCTGCGTTAGCAGATTTGTGGTTTGCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR TCA 72 bp TGCAGGCCTTTCACAACTCCTGAGCCTGGCACCACGTaGGCATTTACTAGATCTGCCCAGGAAGCTATTTTA +
Preference number: 3 (lower is better)
Translates to: CRPFTTPEPGTT*AFTRSAQEAIL
Trigger: TAAAATAGCTTCCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAGGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR GCA 72 bp TCCTGTGAAATAGGGTTCATCAACAGGAACAGTGCCTaGGTCCTGGAGATGGCAGGAGCCCACATTTCTAAA +
Preference number: 3 (lower is better)
Translates to: SCEIGFINRNSA*VLEMAGAHISK
Trigger: TTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGATGAACCCTATTTCACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CAA 90 bp CCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTATCTCCTTCATACGCCTGCAACTTGTCCTaGCCTCCCTGCTCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: PITSCGLLYCWPRLSPSYACNLS*PPCSLS
Trigger: GGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGC...GTATGAAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497791.5
3UTR-3UTR CAA 90 bp ATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGAGGCAGGCCCACTTCTaGCAGGCCTTTCACAACTCC +
Preference number: 3 (lower is better)
Translates to: MISEPRLPITSCGLLYCWRQAHF*QAFHNS
Trigger: GGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCT...CCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR TCA 72 bp ACACTTTCAGTAAGTGGCAGGGGCTGGGTGATTATTTaGGCCTCCTCTCATTTCCCCTCAAATCACCTTAGC +
Preference number: 3 (lower is better)
Translates to: TLSVSGRGWVII*ASSHFPSNHLS
Trigger: GCTAAGGTGATTTGAGGGGAAATGAGAGGAGGCTCAAATAATCACCCAGCCCCTGCCACTTACTGAAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp AACCACAAATCTGCTAACGCAGAAACTCTGATGGTGTaGGGCACAAGGACCTACACTTTCAGTAAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: NHKSANAETLMV*GTRTYTFSKWQ
Trigger: CTGCCACTTACTGAAAGTGTAGGTCCTTGTGCCCCACACCATCAGAGTTTCTGCGTTAGCAGATTTGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp AGGAACCAAGCTGCAGAGAGTCCACAGGGTTACTCATaGTCATTTTCAATGACTGACACTTGGTCCACTGTG +
Preference number: 3 (lower is better)
Translates to: RNQAAESPQGYS*SFSMTDTWSTV
Trigger: CACAGTGGACCAAGTGTCAGTCATTGAAAATGACCATGAGTAACCCTGTGGACTCTCTGCAGCTTGGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CAA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGGCAGATAGACACAGATaGGTCTCCTTCTTTTGCATA +
Preference number: 3 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLADRHR*VSFFCI
Trigger: TATGCAAAAGAAGGAGACCAATCTGTGTCTATCTGC...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp TTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCAAATACGCCGTGCGCCTGCAACTaGTCCTTGCCTCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: LYLKNVSEALKHQVYSNTPCACN*SLPPCS
Trigger: AGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGG...CGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp GCAACAGCTCTCTGGCCAGTGAAACATCAGCAGATAGACACAGATTGGTCTCCTAGAATCTCCAGCATTTaGGACAATGTACACACTGAG +
Preference number: 3 (lower is better)
Translates to: ATALWPVKHQQIDTDWSPRISSI*DNVHTE
Trigger: CTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCT...AGGAGACCAATCTGTGTCTATCTGCTGATGTTTCACTGGCCAGAGAGCTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR GCA 72 bp CAGCTCTGCACGTGCACCGAAGCTGAGTTCTTTGGGTaGTTCCTTTATAGAAAGGGGAGAACCATTATGATT +
Preference number: 3 (lower is better)
Translates to: QLCTCTEAEFFG*FLYRKGRTIMI
Trigger: AATCATAATGGTTCTCCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR GCA 72 bp ACATCAGCAGATAGACACAGATTGGTCTCCTTCTTTTaGATAAGCCTGAGAAGCTTCGATGCAACTGGGTGG +
Preference number: 3 (lower is better)
Translates to: TSADRHRLVSFF*ISLRSFDATGW
Trigger: CCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAATCTGTGTCTATCTGCTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR CCA 72 bp ACACACACACACACACACACACACACACACAATCTATaGGCTTATGTTCTACAGAATGCCTCGAGTAGCTGG +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTHNL*AYVLQNASSSW
Trigger: CCAGCTACTCGAGGCATTCTGTAGAACATAAGCCCATAGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp AGATATTGCCGTGTAATAAACCACCCTGGAACTCCATaGCATGCACTACTAAGCATTTATCACGCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: RYCRVINHPGTP*HALLSIYHAPR
Trigger: CCTGGGAGCGTGATAAATGCTTAGTAGTGCATGCCATGGAGTTCCAGGGTGGTTTATTACACGGCAATATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR-3UTR CAA 90 bp CTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCAGACCGAAGCTGAGTTCTTaGGGTGCTTCCTTTATAGAA +
Preference number: 3 (lower is better)
Translates to: LLKYASQAAFLYISAASRPKLSS*GASFIE
Trigger: TTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGG...TCTGGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp TCTGAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGGGCTATTGTACTGTaGGCCAAGATTATCTCCTCC +
Preference number: 3 (lower is better)
Translates to: SEALKHQVYSNTLPKQLFWAIVL*AKIISS
Trigger: GGAGGAGATAATCTTGGCCAACAGTACAATAGCCCA...GAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR CAA 90 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAAGGCAGGCCCACTTCTaGCAGGCCTTTCACAACTCC +
Preference number: 3 (lower is better)
Translates to: SSLQIIKKFRWTWWCMPIRQAHF*QAFHNS
Trigger: GGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCT...TATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR CCA 72 bp CAGGACACAAGAAAAGCTGTGCTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTCTTACTGCAATTAGGC +
Preference number: 3 (lower is better)
Translates to: QDTRKAVLTLAS*CPRIFVLLQLG
Trigger: GCCTAATTGCAGTAAGACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAGCACAGCTTTTCTTGTGTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp GATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCCAAGATTATCTCCTCC +
Preference number: 3 (lower is better)
Translates to: DDIGTSFANNFL*AIVLLAKIISS
Trigger: GGAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR-3UTR CAA 90 bp AACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCAGAATCTCCAGCATTTaGGACAATGTACACACTGAG +
Preference number: 3 (lower is better)
Translates to: NTKSTQIRFPSSFSVHLCRISSI*DNVHTE
Trigger: CTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCT...GCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp ACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTATTGGTCTCCTTCTTTaGCATAAGCCTGAGAAGCTT +
Preference number: 3 (lower is better)
Translates to: TPSLLKYASQAAFLYISAIGLLL*HKPEKL
Trigger: AAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAAT...AGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp AACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCATTGGTCTCCTTCTTTaGCATAAGCCTGAGAAGCTT +
Preference number: 3 (lower is better)
Translates to: NTKSTQIRFPSSFSVHLCIGLLL*HKPEKL
Trigger: AAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAAT...GCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp TCTGAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCAGAACTCATGGCATTTaGCCAGAGTTATCAACTCCT +
Preference number: 3 (lower is better)
Translates to: SEALKHQVYSNTLPKQLFRTHGI*PELSTP
Trigger: AGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCT...GAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR TCA 72 bp TCACTCCAAAGGCCTCTCAACATATCACTCCAACACTaGAGACACCTAAGAGATTCCTGCAAGTTTTTGTCA +
Preference number: 3 (lower is better)
Translates to: SLQRPLNISLQH*RHLRDSCKFLS
Trigger: TGACAAAAACTTGCAGGAATCTCTTAGGTGTCTTCAGTGTTGGAGTGATATGTTGAGAGGCCTTTGGAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp TTAATGAAGGCTTACCTCCCCTCTACTAATGACCGTTaGGACAATTATGTGGGATCCTTAAGCAAATACCCA +
Preference number: 3 (lower is better)
Translates to: LMKAYLPSTNDR*DNYVGSLSKYP
Trigger: TGGGTATTTGCTTAAGGATCCCACATAATTGTCCCAACGGTCATTAGTAGAGGGGAGGTAAGCCTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp GATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCCAAGATTATCTCCTTC +
Preference number: 3 (lower is better)
Translates to: DDIGTSFANNFL*AIVLLAKIISF
Trigger: GAAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497791.5
3UTR-3UTR CAA 90 bp CAAGATTATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTAGAACTCATGGCATTTaGCCAGAGTTATCAACTCCT +
Preference number: 3 (lower is better)
Translates to: QDYLLLLPTELLESSEEIRTHGI*PELSTP
Trigger: AGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCT...AATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
3UTR GCA 72 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTaGATGCCTATAGCACCAGCTAATCTGGAAGCTGAG +
Preference number: 3 (lower is better)
Translates to: LQIIKKFRWTWW*MPIAPANLEAE
Trigger: CTCAGCTTCCAGATTAGCTGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR-3UTR CAA 90 bp TTGGATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTAGAATCTCCAGCATTTaGGACAATGTACACACTGAG +
Preference number: 3 (lower is better)
Translates to: LDYFQPVTFRRTTYLQCLRISSI*DNVHTE
Trigger: CTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCT...AAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
3UTR TCA 72 bp AATCCAAGCAGGAATAATTGGATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACATATCTTCAATGTCTTC +
Preference number: 3 (lower is better)
Translates to: NPSRNNWIISSQ*LSGGPHIFNVF
Trigger: GAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAATTATTCCTGCTTGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR CCA 72 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTaGTGCATGCCTATAGCACCAGCTAATCTGGAAGCT +
Preference number: 3 (lower is better)
Translates to: SLQIIKKFRWTW*CMPIAPANLEA
Trigger: AGCTTCCAGATTAGCTGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR CCA 72 bp GGACAATTATGTGGGATCCTTAAGCAAATACCCAAATaGAATCTTAGACCTCCTAATTGTGAAGTCAGTCAC +
Preference number: 3 (lower is better)
Translates to: GQLCGILKQIPK*NLRPPNCEVSH
Trigger: GTGACTGACTTCACAATTAGGAGGTCTAAGATTCCATTTGGGTATTTGCTTAAGGATCCCACATAATTGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CCA 72 bp TCTGCAAACTTCCGGTCTTCAAATATCAAGAACTCATaGCATTTTGCCAGAGTTATCAACTCCTTCATCACA +
Preference number: 3 (lower is better)
Translates to: SANFRSSNIKNS*HFARVINSFIT
Trigger: TGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCTTGATATTTGAAGACCGGAAGTTTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
3UTR CCA 72 bp CGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTaGCCAAGATTATCTCCTTCATACTGCTTTTTCACT +
Preference number: 3 (lower is better)
Translates to: RLPITSCGLLYC*PRLSPSYCFFT
Trigger: AGTGAAAAAGCAGTATGAAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497791.5
3UTR CCA 72 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTaGTGGTGCATGCCTATAGCACCAGCTAATCTGGAA +
Preference number: 3 (lower is better)
Translates to: SSLQIIKKFRWT*WCMPIAPANLE
Trigger: TTCCAGATTAGCTGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTCATTTCCGCCAACTGGGTGGATCCTaGGCAGCTCTGCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: RCSSVVPSGQGAGGAHFRQLGGS*AALHVH
Trigger: GTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTG...GCGGAAATGAGCTCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCACAACTCCGGATCCCGTGCGCCTaGAACTTGTCCTTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGTPDAKAGPLLAGLSQLRIPCA*NLSLPP
Trigger: GGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCG...GAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCACAACTCGATCCTGGGCAGCTCTaGACGTGCACCGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GGTPDAKAGPLLAGLSQLDPGQL*TCTEAE
Trigger: CTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATC...GAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCAATGTACACACTGAGTaGAGGCGGATCCCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: AGGAHFRNKEAPPMQRQANVHTE*RRIPCA
Trigger: GGCGCACGGGATCCGCCTCCACTCAGTGTGTACATT...GGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
3UTR CAA 72 bp GAGTGGAGGCGGATCCCGTGCGCCTGCAACTTGTCCTaGCCTCCCTGCTCTCTGTCCAACAGCACTATGGCA +
Preference number: 4 (lower is better)
Translates to: EWRRIPCACNLS*PPCSLSNSTMA
Trigger: TGCCATAGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR TCA 90 bp GACAAGGGTGGGGAAATGGCTGATCCTGTGCCACTTCCTGCAGGTGGGCCCCAAGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: DKGGEMADPVPLPAGGPQGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...TTGGGGCCCACCTGCAGGAAGTGGCACAGGATCAGCCATTTCCCCACCCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SAIRRHPRCKGRPTSCRPGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...AGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCCTGAGAAGCTTCGATaGAACTGGGTGGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: AGGAHFRNKEAPPMQRQAPEKLR*NWVDPG
Trigger: CCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGG...GGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGCTTAGGTTCCTCCAGTaGGCACGCGCGCGCATGCAC +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSLRFLQ*ARARMH
Trigger: GTGCATGCGCGCGCGTGCGCACTGGAGGAACCTAAG...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 72 bp GGCACCCCCGAAGACATGGTTGTCCTCATGAGAACCTaGGTTGTGCGGCCCGTCCACTTCCCACTGACTGTC +
Preference number: 4 (lower is better)
Translates to: GTPEDMVVLMRT*VVRPVHFPLTV
Trigger: GACAGTCAGTGGGAAGTGGACGGGCCGCACAACCAAGGTTCTCATGAGGACAACCATGTCTTCGGGGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GCAACTGGGTGGATCCTGGGCAGCTCTGCACGTGCACCGAAGCTGAGTTCTTTGGGACAATGTACACACTaGGTGGAGGCGGATCCCGTG +
Preference number: 4 (lower is better)
Translates to: ATGWILGSSARAPKLSSLGQCTH*VEADPV
Trigger: CACGGGATCCGCCTCCACTCAGTGTGTACATTGTCC...CAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTGAGCCTGGCACCACGTaGGCATTTACTAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: SAIRRHPRCKGRPTSCRPEPGTT*AFTRSA
Trigger: GGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTC...AGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp AGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAAGGACAGAGGGAGGTGGGCGCCTaGGACCTCAGCACATCACTC +
Preference number: 4 (lower is better)
Translates to: RNSACVLEMAGAHISKGQREVGA*DLSTSL
Trigger: GAGTGATGTGCTGAGGTCTCAGGCGCCCACCTCCCT...CTGTCCTTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp CTCAGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTCACGTGCACCGAAGCTaGGTTCTTTGGGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSHSNRCSSVVPSGQGAGHVHRS*VLWVLP
Trigger: TGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTG...ACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474588.5
CDS-3UTR GCA 90 bp GCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: AIRRHPRCKGRPTSCRPFAVETR*PADRCR
Trigger: TCTACATCGATCTGCGGGGCATCGTGTCTCGACCGC...GAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp AGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGGCAGGCCCACTTCTTaGAGGCCTTTCACAACTCCT +
Preference number: 4 (lower is better)
Translates to: SHSNRCSSVVPSGQGAGGGRPTS*RPFTTP
Trigger: AGGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCC...TCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp CTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCCAGACCCGTCACCAATaGCCCCAAAGCTGCACGAGC +
Preference number: 4 (lower is better)
Translates to: LISAIRRHPRCKGRPTSCQTRHQ*PQSCTS
Trigger: GCTCGTGCAGCTTTGGGGCCATTGGTGACGGGTCTG...GCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCACAACTCGCAGATCGATGTAGATaGGGGAGGAAAGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: GGTPDAKAGPLLAGLSQLADRCR*GRKARS
Trigger: AGAGCGGGCTTTCCTCCCCCATCTACATCGATCTGC...GAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp CAGGGAGCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGGCAGATCGATGTAGATaGGGGAGGAAAGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: QGAGGAHFRNKEAPPMQRADRCR*GRKARS
Trigger: AGAGCGGGCTTTCCTCCCCCATCTACATCGATCTGC...CCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGCTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp CTCAGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTAAGCTTCGATGCAACTaGGTGGATCCTGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LSHSNRCSSVVPSGQGAGKLRCN*VDPGQL
Trigger: GAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTT...ACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCGCTGCAACAGCTCTCTaGCCAGTGAAACATCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGGAHFRNKEAPPMQRQAAATAL*PVKHQQ
Trigger: CTGCTGATGTTTCACTGGCCAGAGAGCTGTTGCAGC...GGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GACAAGGGTGGGGAAATGGCTGATCCTGTGCCACTTCCTGCAGGTGGGCCCCAACCTGCGTCCTGGAGATaGCAGGAGCCCACATTTCTA +
Preference number: 4 (lower is better)
Translates to: DKGGEMADPVPLPAGGPQPASWR*QEPTFL
Trigger: TAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGG...TTGGGGCCCACCTGCAGGAAGTGGCACAGGATCAGCCATTTCCCCACCCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp TGGGCTTATGTTCTACAGAATGCCTCGAGTAGCTGGAGAGGCTGGGGGATGGCGAGCACCCTCTGCTGTTaGCTCTCCTGTGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: WAYVLQNASSSWRGWGMASTLCC*LSCGCT
Trigger: GGTGCAGCCACAGGAGAGCCAACAGCAGAGGGTGCT...CGCCATCCCCCAGCCTCTCCAGCTACTCGAGGCATTCTGTAGAACATAAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp GACAAGGGTGGGGAAATGGCTGATCCTGTGCCACTTCCTGCAGGTGGGCCCCAAGGGGCTTTCATACATTaGACGGGGGAGGCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: DKGGEMADPVPLPAGGPQGAFIH*TGEAGV
Trigger: TACTCCAGCCTCCCCCGTCCAATGTATGAAAGCCCC...TTGGGGCCCACCTGCAGGAAGTGGCACAGGATCAGCCATTTCCCCACCCTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCACAACTCCGAAGTCCCCAAACTTaGAAGCCTGCACGTCGTACA +
Preference number: 4 (lower is better)
Translates to: GGTPDAKAGPLLAGLSQLRSPQT*KPARRT
Trigger: TGTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCG...GAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CTCAGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGCACTATGGCATCAGTaGCCTTCAAGCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSHSNRCSSVVPSGQGAGALWHQ*PSSPPS
Trigger: AGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGC...ACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGGGACAATGTACACACTaGGTGGAGGCGGATCCCGTG +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSGQCTH*VEADPV
Trigger: CACGGGATCCGCCTCCACTCAGTGTGTACATTGTCC...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTCAGACGATCAGCTGCTaGGATTATGCCACGACCTAC +
Preference number: 4 (lower is better)
Translates to: SAIRRHPRCKGRPTSCRPQTISC*DYATTY
Trigger: GTAGGTCGTGGCATAATCTCAGCAGCTGATCGTCTG...AGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LISAIRRHPRCKGRPTSCGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...GCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GGTTGTCCTCATGAGAACCTTGGTTGTGCGGCCCGTCCACTTCCCACTGACTGTGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: GCPHENLGCAARPLPTDCAVETR*PADRCR
Trigger: TCTACATCGATCTGCGGGGCATCGTGTCTCGACCGC...ACAGTCAGTGGGAAGTGGACGGGCCGCACAACCAAGGTTCTCATGAGGACAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CTGTCTGTGCACAAGGGCACCCCCGAAGACATGGTTGTCCTCATGAGAACCTTGTGGAGGCGGATCCCGTaGGCCTGCAACTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LSVHKGTPEDMVVLMRTLWRRIP*ACNLSL
Trigger: CAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCA...CAAGGTTCTCATGAGGACAACCATGTCTTCGGGGGTGCCCTTGTGCACAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp ATGCAGTGTTGGGACATTGGAGGCAGGACTATGGAGCTGTCTGTGCACAAGGGCGATCCTGGGCAGCTCTaGACGTGCACCGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: MQCWDIGGRTMELSVHKGDPGQL*TCTEAE
Trigger: CTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATC...GCCCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp TGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTCATTTCCGCAATGGCAGGCCCACTTCTTaGAGGCCTTTCACAACTCCT +
Preference number: 4 (lower is better)
Translates to: CSSVVPSGQGAGGAHFRNGRPTS*RPFTTP
Trigger: AGGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCC...ATTGCGGAAATGAGCTCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGAGACATGGGGTCCAGAGTCAGAAACGCTaGGGGTGGGGCTGGTACCTG +
Preference number: 4 (lower is better)
Translates to: LHSISLTDILCTPWRHGVQSQKR*GWGWYL
Trigger: CAGGTACCAGCCCCACCCGCAGCGTTTCTGACTCTG...GACCCCATGTCTCCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp GGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCACAACTCGCTGCAACAGCTCTCTaGCCAGTGAAACATCAGCAG +
Preference number: 4 (lower is better)
Translates to: GGTPDAKAGPLLAGLSQLAATAL*PVKHQQ
Trigger: CTGCTGATGTTTCACTGGCCAGAGAGCTGTTGCAGC...GAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp ATGCAGTGTTGGGACATTGGAGGCAGGACTATGGAGCTGTCTGTGCACAAGGGCGGAGAGGCTGGGGGATaGCGTTCTCCACTCCATCAG +
Preference number: 4 (lower is better)
Translates to: MQCWDIGGRTMELSVHKGGEAGG*RSPLHQ
Trigger: CTGATGGAGTGGAGAACGCCATCCCCCAGCCTCTCC...GCCCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CCCTCTTTGGAGAGTGAGCAATGGCAGTTCTGGGAACCAGCCCATGTGGATACCAATGCCTCGAGTAGCTaGAGAGGCTGGGGGATGGCG +
Preference number: 4 (lower is better)
Translates to: PSLESEQWQFWEPAHVDTNASSS*RGWGMA
Trigger: CGCCATCCCCCAGCCTCTCCAGCTACTCGAGGCATT...GGTATCCACATGGGCTGGTTCCCAGAACTGCCATTGCTCACTCTCCAAAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp GACAAGGGTGGGGAAATGGCTGATCCTGTGCCACTTCCTGCAGGTGGGCCCCAATTGGAGGCAGGACTATaGAGCTGTCTGTGCACAAGG +
Preference number: 4 (lower is better)
Translates to: DKGGEMADPVPLPAGGPQLEAGL*SCLCTR
Trigger: CCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAA...TTGGGGCCCACCTGCAGGAAGTGGCACAGGATCAGCCATTTCCCCACCCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCGCACTATGGCATCAGTaGCCTTCAAGCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AIRRHPRCKGRPTSCRPFALWHQ*PSSPPS
Trigger: AGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGC...GAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCCACGTGCACCGAAGCTaGGTTCTTTGGGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LISAIRRHPRCKGRPTSCHVHRS*VLWVLP
Trigger: AGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTG...GCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGAGCCTGGCACCACGTaGGCATTTACTAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: HFRNKEAPPMQRQAHFLQEPGTT*AFTRSA
Trigger: GGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTC...CTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGCCCCTCTTTGGAGAGTaGGCAATGGCAGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSPLFGE*AMAVLG
Trigger: TCCCAGAACTGCCATTGCTCACTCTCCAAAGAGGGG...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp ACTGACTGTCCTTACCTGACGATTGAGACTCTCAGGCCCACCAGGTCTGCTTCTGGAACTGGTACTGAGTaGCTCCCACCCACCGGGTAC +
Preference number: 4 (lower is better)
Translates to: TDCPYLTIETLRPTRSASGTGTE*LPPTGY
Trigger: GTACCCGGTGGGTGGGAGTCACTCAGTACCAGTTCC...AGAAGCAGACCTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGGGCTGCAGTGAGCTATaGTCACAGAGCTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSGCSEL*SQSCTP
Trigger: TGGAGTGCAGCTCTGTGATCATAGCTCACTGCAGCC...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460034.5
ENST00000467167.5
CDS-3UTR GCA 90 bp TGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTCATTTCCGCAATCCAAACTTGAAAGCCTaGACGTCGTACAGACCCGTC +
Preference number: 4 (lower is better)
Translates to: CSSVVPSGQGAGGAHFRNPNLKA*TSYRPV
Trigger: GACGGGTCTGTACGACGTGCAGGCTTTCAAGTTTGG...ATTGCGGAAATGAGCTCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp ATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAACGGATCCCGTGCGCCTaGAACTTGTCCTTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: INRNSACVLEMAGAHISKRIPCA*NLSLPP
Trigger: GGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCG...TTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp AGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAAAAGCATCTGCTAGCTaGAACAGCTCTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SHSNRCSSVVPSGQGAGGKASAS*NSSLAS
Trigger: ACTGGCCAGAGAGCTGTTGCAGCTAGCAGATGCTTT...TCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp AGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGATCTGTACATCTCTGCTaGTTCCAGACGATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SHSNRCSSVVPSGQGAGGSVHLC*FQTISC
Trigger: GCAGCTGATCGTCTGGAAGCAGCAGAGATGTACAGA...TCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGCATCAACAGGAACAGTaGCTGCGTCCTGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSHQQEQ*LRPGDG
Trigger: GCCATCTCCAGGACGCAGGCACTGTTCCTGTTGATG...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp TGTGAAATAGGGTTCATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGATGGCTCTCCTGTGGCTaGACCCCTGACAGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: CEIGFINRNSACVLEMAGWLSCG*TPDSQV
Trigger: GACCTGGCTGTCAGGGGTGCAGCCACAGGAGAGCCA...TCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGATGAACCCTATTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATCTGCCCAGGCAGACCCGTCACCAATaGCCCCAAAGCTGCACGAGC +
Preference number: 4 (lower is better)
Translates to: LSQLLSLAPREHLLDLPRQTRHQ*PQSCTS
Trigger: GCTCGTGCAGCTTTGGGGCCATTGGTGACGGGTCTG...CCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp CTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCTTCGATGCAACTGGGTaGATCCTGGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LISAIRRHPRCKGRPTSCFDATG*ILGSSA
Trigger: TGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAA...GCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCGCTGCAACAGCTCTCTaGCCAGTGAAACATCAGCAG +
Preference number: 4 (lower is better)
Translates to: AIRRHPRCKGRPTSCRPFAATAL*PVKHQQ
Trigger: CTGCTGATGTTTCACTGGCCAGAGAGCTGTTGCAGC...GAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGCAGACAGCATTTCCCTaGAGATGCAGCACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSQTAFP*RCSTGD
Trigger: GTCCCCAGTGCTGCATCTCCAGGGAAATGCTGTCTG...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CTGTCTGTGCACAAGGGCACCCCCGAAGACATGGTTGTCCTCATGAGAACCTTGTTGGACGGGGGAGGCTaGAGTAGGCTCTGCTCTACT +
Preference number: 4 (lower is better)
Translates to: LSVHKGTPEDMVVLMRTLLDGGG*SRLCST
Trigger: AGTAGAGCAGAGCCTACTCCAGCCTCCCCCGTCCAA...CAAGGTTCTCATGAGGACAACCATGTCTTCGGGGGTGCCCTTGTGCACAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGTGTCCCAGACACACATaGCCGAGCTGGGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLCPRHT*PSWGEG
Trigger: TCCCTCGCCCCAGCTCGGCCATGTGTGTCTGGGACA...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 72 bp CCTGCGCAGGCAACCGCAGCATCACCTGGGACCTTTTaGGAAACGCAAATTCTCAAGCCCCATCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PAQATAASPGTF*ETQILKPHPRA
Trigger: AGCTCTGGGATGGGGCTTGAGAATTTGCGTTTCCAAAAAGGTCCCAGGTGATGCTGCGGTTGCCTGCGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGGCACTATGGCATCAGTaGCCTTCAAGCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSALWHQ*PSSPPS
Trigger: AGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGC...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp CATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTAGGGGAGAACCATTATaGTTCGCTGCCACAAAGACA +
Preference number: 4 (lower is better)
Translates to: HSNRCSSVVPSGQGAGGARGEPL*FAATKT
Trigger: TGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCT...AGCTCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CTTGCAGGCCTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATGCCTTTCACAACTCCTaGGCCTGGCACCACGTGAGC +
Preference number: 4 (lower is better)
Translates to: LAGLSQLLSLAPREHLLDAFHNS*AWHHVS
Trigger: GCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAGGC...ATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAGGCCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp ATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAACAGTGGGCCATCAGCTaGCAAGGGTGGGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: INRNSACVLEMAGAHISKQWAIS*QGWGNG
Trigger: GCCATTTCCCCACCCTTGTCAGCTGATGGCCCACTG...TTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GGGGATGGCGTTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGAAGGACAGGAGCATGTaGCTCTTAGCAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GDGVLHSISLTDILCTPWKDRSM*LLAGGR
Trigger: TCTGCCTCCTGCTAAGAGTCACATGCTCCTGTCCTT...CCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAACGCCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp CACAGACCTCCTCTGCTGACAGTTCCCCACCCTTATTTTGGGTGTCAACTGCCCCCGTCCACTTCCCACTaGCTGTCCTTACCTGACGAT +
Preference number: 4 (lower is better)
Translates to: HRPPLLTVPHPYFGCQLPPSTSH*LSLPDD
Trigger: ATCGTCAGGTAAGGACAGTCAGTGGGAAGTGGACGG...GGGCAGTTGACACCCAAAATAAGGGTGGGGAACTGTCAGCAGAGGAGGTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CACAGACCTCCTCTGCTGACAGTTCCCCACCCTTATTTTGGGTGTCAACTGCCCGGGCAGCTCTGCACGTaGACCGAAGCTGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: HRPPLLTVPHPYFGCQLPGQLCT*TEAEFF
Trigger: AAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCC...GGGCAGTTGACACCCAAAATAAGGGTGGGGAACTGTCAGCAGAGGAGGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CTTGCAGGCCTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATGATCCTGGGCAGCTCTaGACGTGCACCGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LAGLSQLLSLAPREHLLDDPGQL*TCTEAE
Trigger: CTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATC...ATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAGGCCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CCCTCTTTGGAGAGTGAGCAATGGCAGTTCTGGGAACCAGCCCATGTGGATACCGGCAGGCCCACTTCTTaGAGGCCTTTCACAACTCCT +
Preference number: 4 (lower is better)
Translates to: PSLESEQWQFWEPAHVDTGRPTS*RPFTTP
Trigger: AGGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCC...GGTATCCACATGGGCTGGTTCCCAGAACTGCCATTGCTCACTCTCCAAAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp TTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGAGACATGGGGTCAAAGTCCAGTCCCTaGGCAGGCAACCGCAGCATC +
Preference number: 4 (lower is better)
Translates to: FSTPSVSQTFCAPHGDMGSKSSP*AGNRSI
Trigger: GATGCTGCGGTTGCCTGCGCAGGGACTGGACTTTGA...CCCCATGTCTCCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGCAACTGGGTGGATCCTaGGCAGCTCTGCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLQLGGS*AALHVH
Trigger: GTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTG...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GGTTGTCCTCATGAGAACCTTGGTTGTGCGGCCCGTCCACTTCCCACTGACTGTGAGCAATGGCAGTTCTaGGAACCAGCCCATGTGGAT +
Preference number: 4 (lower is better)
Translates to: GCPHENLGCAARPLPTDCEQWQF*EPAHVD
Trigger: ATCCACATGGGCTGGTTCCCAGAACTGCCATTGCTC...ACAGTCAGTGGGAAGTGGACGGGCCGCACAACCAAGGTTCTCATGAGGACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp GGGGATGGCGTTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGCCACCTTCCCCTCTTTaGAGAGTGAGCAATGGCAGT +
Preference number: 4 (lower is better)
Translates to: GDGVLHSISLTDILCTPWPPSPL*RVSNGS
Trigger: ACTGCCATTGCTCACTCTCCAAAGAGGGGAAGGTGG...CCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAACGCCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp TGGGCTTATGTTCTACAGAATGCCTCGAGTAGCTGGAGAGGCTGGGGGATGGCGACAAGGGTGGGGAAATaGCTGATCCTGTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: WAYVLQNASSSWRGWGMATRVGK*LILCHF
Trigger: GAAGTGGCACAGGATCAGCCATTTCCCCACCCTTGT...CGCCATCCCCCAGCCTCTCCAGCTACTCGAGGCATTCTGTAGAACATAAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CAGACAGCATTTCCCTGGAGATGCAGCACTGGGGACATGAAGCCCAAATTGGACGGGAAGGCAGAAGACTaGTTCCTGGTGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: QTAFPWRCSTGDMKPKLDGKAED*FLVEPS
Trigger: ACTGGGCTCCACCAGGAACCAGTCTTCTGCCTTCCC...GTCCAATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAGGGAAATGCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 72 bp CAGAAGCCAGAGAGGGGTGAGCAGAAACACGAGAGTTaGGGTTCAGGCTCGGAACTGGTACTGAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: QKPERGEQKHES*GSGSELVLSDS
Trigger: GGAGTCACTCAGTACCAGTTCCGAGCCTGAACCCAAACTCTCGTGTTTCTGCTCACCCCTCTCTGGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTCATTTCCGCAATAAAATATCTGCAACCTaGCTCAGAAGACGCGGTCGA +
Preference number: 4 (lower is better)
Translates to: CSSVVPSGQGAGGAHFRNKISAT*LRRRGR
Trigger: TCGACCGCGTCTTCTGAGTCAGGTTGCAGATATTTT...ATTGCGGAAATGAGCTCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGACACGGTGTCAAAACTaGTGCCTGCATTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HFRNKEAPPMQRQAHFLQTRCQN*CLHFGQ
Trigger: CTGCCCAAAATGCAGGCATCAGTTTTGACACCGTGT...CTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CCCTCTTTGGAGAGTGAGCAATGGCAGTTCTGGGAACCAGCCCATGTGGATACCGCACTATGGCATCAGTaGCCTTCAAGCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLESEQWQFWEPAHVDTALWHQ*PSSPPS
Trigger: AGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGC...GGTATCCACATGGGCTGGTTCCCAGAACTGCCATTGCTCACTCTCCAAAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GTGACTCTTAGCAGGAGGCAGACCTCAAGGCTGTCTCACTGCAGAGGCAGAAATCACGTGCACCGAAGCTaGGTTCTTTGGGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VTLSRRQTSRLSHCRGRNHVHRS*VLWVLP
Trigger: AGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTG...ATTTCTGCCTCTGCAGTGAGACAGCCTTGAGGTCTGCCTCCTGCTAAGAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GCAACAGCTCTCTGGCCAGTGAAACATCAGCAGATAGACACAGATTGGTCTCCTGCCTTTCACAACTCCTaGGCCTGGCACCACGTGAGC +
Preference number: 4 (lower is better)
Translates to: ATALWPVKHQQIDTDWSPAFHNS*AWHHVS
Trigger: GCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAGGC...AGGAGACCAATCTGTGTCTATCTGCTGATGTTTCACTGGCCAGAGAGCTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
CDS-3UTR TCA 90 bp CATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 4 (lower is better)
Translates to: HSNRCSSVVPSGQGAGGAIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...AGCTCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CACAGACCTCCTCTGCTGACAGTTCCCCACCCTTATTTTGGGTGTCAACTGCCCGGCAGGAGAACTGCTTaGACCAGAGAGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: HRPPLLTVPHPYFGCQLPGRRTA*TREAEV
Trigger: AACTTCTGCCTCTCTGGTTCAAGCAGTTCTCCTGCC...GGGCAGTTGACACCCAAAATAAGGGTGGGGAACTGTCAGCAGAGGAGGTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GGGGATGGCGTTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGGCAGCACTGGGGACATaGAGCCCAAATTGGACTTTA +
Preference number: 4 (lower is better)
Translates to: GDGVLHSISLTDILCTPWAALGT*SPNWTL
Trigger: TAAAGTCCAATTTGGGCTTCATGTCCCCAGTGCTGC...CCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAACGCCATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp CTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGAGACATGGGGTCCTAACGCAGAAACTCTaGTGGTGTGGGGCACAAGGA +
Preference number: 4 (lower is better)
Translates to: LHSISLTDILCTPWRHGVLTQKL*WCGAQG
Trigger: TCCTTGTGCCCCACACCATCAGAGTTTCTGCGTTAG...GACCCCATGTCTCCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GTGACTCTTAGCAGGAGGCAGACCTCAAGGCTGTCTCACTGCAGAGGCAGAAATGTAGTTCCAGCTACTTaGGCGGATCGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VTLSRRQTSRLSHCRGRNVVPAT*ADRLSP
Trigger: TGGGCTCAAGCGATCCGCTCAAGTAGCTGGAACTAC...ATTTCTGCCTCTGCAGTGAGACAGCCTTGAGGTCTGCCTCCTGCTAAGAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp CAGACAGCATTTCCCTGGAGATGCAGCACTGGGGACATGAAGCCCAAATTGGACCACACTGAGTCACAGTaGGAACCTCCTCCACCGTCT +
Preference number: 4 (lower is better)
Translates to: QTAFPWRCSTGDMKPKLDHTESQ*EPPPPS
Trigger: AGACGGTGGAGGAGGTTCTCACTGTGACTCAGTGTG...GTCCAATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAGGGAAATGCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TGTGAAATAGGGTTCATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGACTGTCGGGCACACACTaGGTCACAGTGAGAACCTCC +
Preference number: 4 (lower is better)
Translates to: CEIGFINRNSACVLEMAGLSGTH*VTVRTS
Trigger: GGAGGTTCTCACTGTGACTCAGTGTGTGCCCGACAG...TCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGATGAACCCTATTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGTTCAGCAGCAGCACGTaGGAGCCCACACCAGGATCT +
Preference number: 4 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLFSSST*EPTPGS
Trigger: AGATCCTGGTGTGGGCTCTCACGTGCTGCTGCTGAA...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGAGACATGGGGTCCTTACCTGACGATTaGGACTCTCAGGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: FSTPSVSQTFCAPHGDMGSLPDD*DSQAHQ
Trigger: CTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGA...CCCCATGTCTCCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp ATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAACAATGGCCCCAAAGCTaGACGAGCGACCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: INRNSACVLEMAGAHISKQWPQS*TSDRHC
Trigger: ACAATGGCGGTCGCTCGTGCAGCTTTGGGGCCATTG...TTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLAVETR*PADRCR
Trigger: TCTACATCGATCTGCGGGGCATCGTGTCTCGACCGC...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp ACTGACTGTCCTTACCTGACGATTGAGACTCTCAGGCCCACCAGGTCTGCTTCTCCTGCAACTTGTCCTTaGCTCCCTGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TDCPYLTIETLRPTRSASPATCP*LPALCP
Trigger: TGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGG...AGAAGCAGACCTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATCTGCCCAGGCCTGCAACTTGTCCTTaGCTCCCTGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LSQLLSLAPREHLLDLPRPATCP*LPALCP
Trigger: TGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGG...CCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR GCA 90 bp AGTCTAGTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCGGATCCCGTGCGCCTaGAACTTGTCCTTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLVPWRDRKDPQMWKTLTRIPCA*NLSLPP
Trigger: GGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCG...GGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGACTAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCACAACTCGCTGAGTTCTTTGGGTaGTTCCTTTATAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GGTPDAKAGPLLAGLSQLAEFFG*FLYRKG
Trigger: CCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGC...GAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATCTGCCCAGGGGGCAGCTCTGCACGTaGACCGAAGCTGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSQLLSLAPREHLLDLPRGQLCT*TEAEFF
Trigger: AAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCC...CCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATCTGCCCAGGCCTGAGAAGCTTCGATaGAACTGGGTGGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSQLLSLAPREHLLDLPRPEKLR*NWVDPG
Trigger: CCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGG...CCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGAAAGCATCTGCTAGCTaGAACAGCTCTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSKASAS*NSSLAS
Trigger: ACTGGCCAGAGAGCTGTTGCAGCTAGCAGATGCTTT...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGAGCCATTCTAACCGCTaGTCTAGTGTAGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSSHSNR*SSVVPS
Trigger: ACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CCCTCTTTGGAGAGTGAGCAATGGCAGTTCTGGGAACCAGCCCATGTGGATACCCTGAGGCAGGAGAACTaGTTGAACCAGAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PSLESEQWQFWEPAHVDTLRQEN*LNQRGR
Trigger: TCTGCCTCTCTGGTTCAAGCAGTTCTCCTGCCTCAG...GGTATCCACATGGGCTGGTTCCCAGAACTGCCATTGCTCACTCTCCAAAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp GGCCACTTCTTCCTTGAGAGTTGGTCTCTCCCACAGACAGCATTTCCCTGGAGAAACAGGAACAGTGCCTaGGTCCTGGAGATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GHFFLESWSLPQTAFPWRNRNSA*VLEMAG
Trigger: TCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTT...TCTCCAGGGAAATGCTGTCTGTGGGAGAGACCAACTCTCAAGGAAGAAGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp GCAACAGCTCTCTGGCCAGTGAAACATCAGCAGATAGACACAGATTGGTCTCCTCGCGCGCTGCCTGTTTaGTTCAAATTCCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: ATALWPVKHQQIDTDWSPRALPV*FKFPGA
Trigger: GGCGCCTGGGAATTTGAAGCAAACAGGCAGCGCGCG...AGGAGACCAATCTGTGTCTATCTGCTGATGTTTCACTGGCCAGAGAGCTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462091.5
CDS-3UTR CCA 90 bp CTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATCTGCCCAGGAAGCTTCGATGCAACTaGGTGGATCCTGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LSQLLSLAPREHLLDLPRKLRCN*VDPGQL
Trigger: GAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTT...CCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp ACTGACTGTCCTTACCTGACGATTGAGACTCTCAGGCCCACCAGGTCTGCTTCTATCTGGAAGCTGAGGTaGGAGGATCACCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: TDCPYLTIETLRPTRSASIWKLR*EDHLGG
Trigger: ACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGAT...AGAAGCAGACCTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CTTGTCCTTGCCTCCCTGCTCTCTGTCCAACAGCACTATGGCATCAGTGACCTTATCTGGAAGCTGAGGTaGGAGGATCACCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LVLASLLSVQQHYGISDLIWKLR*EDHLGG
Trigger: ACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGAT...AAGGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR TCA 90 bp CTTGCAGGCCTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATGAGCCTGGCACCACGTaGGCATTTACTAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: LAGLSQLLSLAPREHLLDEPGTT*AFTRSA
Trigger: GGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTC...ATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAGGCCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp AGTCTAGTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCGCCTTTCACAACTCCTaGGCCTGGCACCACGTGAGC +
Preference number: 4 (lower is better)
Translates to: SLVPWRDRKDPQMWKTLTAFHNS*AWHHVS
Trigger: GCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAGGC...GGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGACTAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CAGGGAGCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGACTCCTGGAGTCAAGTaGAGAAATTCTGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: QGAGGAHFRNKEAPPMQRTPGVK*RNSGFM
Trigger: CATGAAACCAGAATTTCTTCACTTGACTCCAGGAGT...CCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp GCTTACCTCCCCTCTACTAATGACCGTTGGGACAATTATGTGGGATCCTTAAGCAGTGTGCTGGTGCAATaGGCACCGGGACAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: AYLPSTNDRWDNYVGSLSSVLVQ*APGQPS
Trigger: TGAGGGCTGTCCCGGTGCTCATTGCACCAGCACACT...GCTTAAGGATCCCACATAATTGTCCCAACGGTCATTAGTAGAGGGGAGGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp CAGACAGCATTTCCCTGGAGATGCAGCACTGGGGACATGAAGCCCAAATTGGACTGGCCACTTCTTCCTTaGGAGTTGGTCTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: QTAFPWRCSTGDMKPKLDWPLLP*ELVSPT
Trigger: TGTGGGAGAGACCAACTCTCAAGGAAGAAGTGGCCA...GTCCAATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAGGGAAATGCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GACAAGGGTGGGGAAATGGCTGATCCTGTGCCACTTCCTGCAGGTGGGCCCCAAATATCACTCCAACACTaGAGACACCTAAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: DKGGEMADPVPLPAGGPQISLQH*RHLRDS
Trigger: GGAATCTCTTAGGTGTCTTCAGTGTTGGAGTGATAT...TTGGGGCCCACCTGCAGGAAGTGGCACAGGATCAGCCATTTCCCCACCCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CTCAGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGTCAAAACTGATGCCTaGATTTTGGGCAGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LSHSNRCSSVVPSGQGAGVKTDA*ILGSLE
Trigger: TTCCAAACTGCCCAAAATGCAGGCATCAGTTTTGAC...ACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp AGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGATTGGTCTCCTTCTTTTaGATAAGCCTGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SHSNRCSSVVPSGQGAGGLVSFF*ISLRSF
Trigger: GAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAA...TCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGGGCAGGCCCACTTCTTaGAGGCCTTTCACAACTCCT +
Preference number: 4 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLGRPTS*RPFTTP
Trigger: AGGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCC...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp AGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGAAATTCTGGTTTCATaGTTACTCGGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SHSNRCSSVVPSGQGAGGEILVS*LLGSQK
Trigger: TTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTC...TCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCAAGATTATCTCCTCCTaGTTCCAACTGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: AIRRHPRCKGRPTSCRPFKIISS*FQLNSW
Trigger: CCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTT...GAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CTGTCTGTGCACAAGGGCACCCCCGAAGACATGGTTGTCCTCATGAGAACCTTGTCTGTACATCTCTGCTaGTTCCAGACGATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSVHKGTPEDMVVLMRTLSVHLC*FQTISC
Trigger: GCAGCTGATCGTCTGGAAGCAGCAGAGATGTACAGA...CAAGGTTCTCATGAGGACAACCATGTCTTCGGGGGTGCCCTTGTGCACAGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp GGGGATGGCGTTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGGCCCAAGTTCTTCTCTaGCTGAATCAACTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GDGVLHSISLTDILCTPWAQVLL*LNQLVL
Trigger: GAGGACAAGTTGATTCAGGCAGAGAAGAACTTGGGC...CCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAACGCCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGGCAGATCGATGTAGATaGGGGAGGAAAGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLADRCR*GRKARS
Trigger: AGAGCGGGCTTTCCTCCCCCATCTACATCGATCTGC...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TCTGCACGTGCACCGAAGCTGAGTTCTTTGGGTGCTTCCTTTATAGAAAGGGGAAATGTACACACTGAGTaGAGGCGGATCCCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SARAPKLSSLGASFIERGNVHTE*RRIPCA
Trigger: GGCGCACGGGATCCGCCTCCACTCAGTGTGTACATT...TCCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: AGGAHFRNKEAPPMQRQAIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...GGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp CATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTCTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: HSNRCSSVVPSGQGAGGALTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...AGCTCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp AGTCTAGTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCACAGTGCCTGCGTCCTaGAGATGGCAGGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: SLVPWRDRKDPQMWKTLTTVPAS*RWQEPT
Trigger: TGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGT...GGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGACTAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CCCTCTTTGGAGAGTGAGCAATGGCAGTTCTGGGAACCAGCCCATGTGGATACCCATATTCTTCCCATGTaGTGGCAGAAGCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PSLESEQWQFWEPAHVDTHILPM*WQKPER
Trigger: CCTCTCTGGCTTCTGCCACCACATGGGAAGAATATG...GGTATCCACATGGGCTGGTTCCCAGAACTGCCATTGCTCACTCTCCAAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CAGACAGCATTTCCCTGGAGATGCAGCACTGGGGACATGAAGCCCAAATTGGACGCCAGAGGTGATGGTTaGGAAGGCAGAAGACTGGTT +
Preference number: 4 (lower is better)
Translates to: QTAFPWRCSTGDMKPKLDARGDG*EGRRLV
Trigger: AACCAGTCTTCTGCCTTCCCAACCATCACCTCTGGC...GTCCAATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAGGGAAATGCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp GCTTACCTCCCCTCTACTAATGACCGTTGGGACAATTATGTGGGATCCTTAAGCCACACATGGCCGAGCTaGGGCGAGGGATCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: AYLPSTNDRWDNYVGSLSHTWPS*GEGSLD
Trigger: ATCCAGAGATCCCTCGCCCCAGCTCGGCCATGTGTG...GCTTAAGGATCCCACATAATTGTCCCAACGGTCATTAGTAGAGGGGAGGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 72 bp AACTCCCTTCCTGCTCCTTCTGTGGCCACTTCTTCCTaGAGAGTTGGTCTCTCCCACAGACAGCATTTCCCT +
Preference number: 4 (lower is better)
Translates to: NSLPAPSVATSS*RVGLSHRQHFP
Trigger: AGGGAAATGCTGTCTGTGGGAGAGACCAACTCTCAAGGAAGAAGTGGCCACAGAAGGAGCAGGAAGGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 72 bp GAGTCAGAAACGCTGCGGGTGGGGCTGGTACCTGTTTaGACAAGACTCCAGGTGACTCTGATACCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: ESETLRVGLVPV*TRLQVTLIPAK
Trigger: TTTAGCAGGTATCAGAGTCACCTGGAGTCTTGTCAAAACAGGTACCAGCCCCACCCGCAGCGTTTCTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp CACAGACCTCCTCTGCTGACAGTTCCCCACCCTTATTTTGGGTGTCAACTGCCCAAAATATCTGCAACCTaGCTCAGAAGACGCGGTCGA +
Preference number: 4 (lower is better)
Translates to: HRPPLLTVPHPYFGCQLPKISAT*LRRRGR
Trigger: TCGACCGCGTCTTCTGAGTCAGGTTGCAGATATTTT...GGGCAGTTGACACCCAAAATAAGGGTGGGGAACTGTCAGCAGAGGAGGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp CCCTGCTCTCTGTCCAACAGCACTATGGCATCAGTGACCTTCAAGCCCTCCTTCAGGGGAGAACCATTATaGTTCGCTGCCACAAAGACA +
Preference number: 4 (lower is better)
Translates to: PCSLSNSTMASVTFKPSFRGEPL*FAATKT
Trigger: TGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCT...GAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TCTGCACGTGCACCGAAGCTGAGTTCTTTGGGTGCTTCCTTTATAGAAAGGGGACACGTGCACCGAAGCTaGGTTCTTTGGGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SARAPKLSSLGASFIERGHVHRS*VLWVLP
Trigger: AGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTG...TCCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR TCA 90 bp ATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAACAGACGATCAGCTGCTaGGATTATGCCACGACCTAC +
Preference number: 4 (lower is better)
Translates to: INRNSACVLEMAGAHISKQTISC*DYATTY
Trigger: GTAGGTCGTGGCATAATCTCAGCAGCTGATCGTCTG...TTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GGGGATGGCGTTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 4 (lower is better)
Translates to: GDGVLHSISLTDILCTPWIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...CCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAACGCCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp ATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAAAAGTGGGAGAACCACTaGCACATGGAAGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: INRNSACVLEMAGAHISKKWENH*HMEVTA
Trigger: GGCTGTCACTTCCATGTGTCAGTGGTTCTCCCACTT...TTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGCCTGCAGTACTGGGCTaGCTCTTCACAATAGAAATA +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSPAVLG*LFTIEI
Trigger: TATTTCTATTGTGAAGAGTCAGCCCAGTACTGCAGG...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GTGACTCTTAGCAGGAGGCAGACCTCAAGGCTGTCTCACTGCAGAGGCAGAAATATTCAGCCCTGGCACTaGAGACACGATTCATACCCA +
Preference number: 4 (lower is better)
Translates to: VTLSRRQTSRLSHCRGRNIQPWH*RHDSYP
Trigger: TGGGTATGAATCGTGTCTTCAGTGCCAGGGCTGAAT...ATTTCTGCCTCTGCAGTGAGACAGCCTTGAGGTCTGCCTCCTGCTAAGAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GACAAGGGTGGGGAAATGGCTGATCCTGTGCCACTTCCTGCAGGTGGGCCCCAAAACTCCAACAAGTCCTaGTTTTTCTCATGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: DKGGEMADPVPLPAGGPQNSNKS*FFSCFV
Trigger: CACAAAGCATGAGAAAAATCAGGACTTGTTGGAGTT...TTGGGGCCCACCTGCAGGAAGTGGCACAGGATCAGCCATTTCCCCACCCTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp AGATTGGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTGGGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: RLVSFFCISLRSFDATGWAVETR*PADRCR
Trigger: TCTACATCGATCTGCGGGGCATCGTGTCTCGACCGC...CCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TGTGAAATAGGGTTCATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGATTGTCCTTGCCTCCCTaGTCTCTGTCCAACAGCACT +
Preference number: 4 (lower is better)
Translates to: CEIGFINRNSACVLEMAGLSLPP*SLSNST
Trigger: AGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAA...TCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGATGAACCCTATTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTGGAGGCGGATCCCGTaGGCCTGCAACTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSLLKYASQAAFLYISAAWRRIP*ACNLSL
Trigger: CAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCA...AGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCTGGAGGCGGATCCCGTaGGCCTGCAACTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: DIGTSFANNFLWAIVLLAWRRIP*ACNLSL
Trigger: CAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCA...GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GGGGATGGCGTTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGGCTGAGTTCTTTGGGTaGTTCCTTTATAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GDGVLHSISLTDILCTPWAEFFG*FLYRKG
Trigger: CCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGC...CCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAACGCCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp GATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCGATCCTGGGCAGCTCTaGACGTGCACCGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: DIGTSFANNFLWAIVLLADPGQL*TCTEAE
Trigger: CTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATC...GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GGGCAAAGGAACCAAGCTGCAGAGAGTCCACAGGGTTACTCATGGTCATTTTCACCTGAGAAGCTTCGATaGAACTGGGTGGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: GQRNQAAESPQGYSWSFSPEKLR*NWVDPG
Trigger: CCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGG...TGAAAATGACCATGAGTAACCCTGTGGACTCTCTGCAGCTTGGTTCCTTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATCTGCCCAGGAAAGCATCTGCTAGCTaGAACAGCTCTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSQLLSLAPREHLLDLPRKASAS*NSSLAS
Trigger: ACTGGCCAGAGAGCTGTTGCAGCTAGCAGATGCTTT...CCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp TCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTGAACTCATGGCATTTTaGCAGAGTTATCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: SAIRRHPRCKGRPTSCRPELMAF*QSYQLL
Trigger: AAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC...AGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCACAACAAATTCAGAGTaGTCCTCAGCCATTCTAACC +
Preference number: 4 (lower is better)
Translates to: AIRRHPRCKGRPTSCRPFTTNSE*SSAILT
Trigger: GGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGT...GAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATCTGCCCAGGTCTGTACATCTCTGCTaGTTCCAGACGATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSQLLSLAPREHLLDLPRSVHLC*FQTISC
Trigger: GCAGCTGATCGTCTGGAAGCAGCAGAGATGTACAGA...CCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CAGACAGCATTTCCCTGGAGATGCAGCACTGGGGACATGAAGCCCAAATTGGACAGTGCAGGGAGACAATaGAGTGTTGGGACATTGGAG +
Preference number: 4 (lower is better)
Translates to: QTAFPWRCSTGDMKPKLDSAGRQ*SVGTLE
Trigger: CTCCAATGTCCCAACACTGCATTGTCTCCCTGCACT...GTCCAATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAGGGAAATGCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp AGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTGAGTTCTTTGGGTaGTTCCATAATCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SHSNRCSSVVPSGQGAGGAEFFG*FHNPLF
Trigger: AAACAAAGGATTATGGAAGCACCCAAAGAACTCAGC...TCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474588.5
CDS-3UTR CCA 90 bp GGGTGCTTCCTTTATAGAAAGGGGAGAACCATTATGATTCGCTGCCACAAAGACCAGACCCGTCACCAATaGCCCCAAAGCTGCACGAGC +
Preference number: 4 (lower is better)
Translates to: GCFLYRKGRTIMIRCHKDQTRHQ*PQSCTS
Trigger: GCTCGTGCAGCTTTGGGGCCATTGGTGACGGGTCTG...GTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCTTTCTATAAAGGAAGCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTCAGACCCGTCACCAATaGCCCCAAAGCTGCACGAGC +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIIQTRHQ*PQSCTS
Trigger: GCTCGTGCAGCTTTGGGGCCATTGGTGACGGGTCTG...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp ATCTCTGCTGCTTCCAGACGATCAGCTGCTGAGATTATGCCACGACCTACAATGGCAGATCGATGTAGATaGGGGAGGAAAGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: ISAASRRSAAEIMPRPTMADRCR*GRKARS
Trigger: AGAGCGGGCTTTCCTCCCCCATCTACATCGATCTGC...CATTGTAGGTCGTGGCATAATCTCAGCAGCTGATCGTCTGGAAGCAGCAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp AGTCTAGTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCAATGTACACACTGAGTaGAGGCGGATCCCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SLVPWRDRKDPQMWKTLTNVHTE*RRIPCA
Trigger: GGCGCACGGGATCCGCCTCCACTCAGTGTGTACATT...GGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGACTAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTCAACTGGGTGGATCCTaGGCAGCTCTGCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIIQLGGS*AALHVH
Trigger: GTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTG...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CAGGGAGCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGTTCCAACTGAACTCCTaGAGTCAAGTGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: QGAGGAHFRNKEAPPMQRFQLNS*SQVKKF
Trigger: GAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAA...CCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGCTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACA +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSKDPQM*KTLTQT
Trigger: TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTT...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TGTGAAATAGGGTTCATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAATTCTTCCCATGTGGTaGCAGAAGCCAGAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: CEIGFINRNSACVLEMAGILPMW*QKPERG
Trigger: ACCCCTCTCTGGCTTCTGCCACCACATGGGAAGAAT...TCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGATGAACCCTATTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CCCTCTTTGGAGAGTGAGCAATGGCAGTTCTGGGAACCAGCCCATGTGGATACCAAGACTGGTTCCTGGTaGAGCCCAGTTTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PSLESEQWQFWEPAHVDTKTGSW*SPVFVF
Trigger: GAAGACAAAAACTGGGCTCCACCAGGAACCAGTCTT...GGTATCCACATGGGCTGGTTCCCAGAACTGCCATTGCTCACTCTCCAAAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp TCACCCTGCCCCTGCTCAAACACCACCTTGAATGTGGGCTTTCTCTTTATTATTGGGGCGAGGGATCTCTaGATCTTCCTGCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SPCPCSNTTLNVGFLFIIGARDL*IFLLSW
Trigger: CCAGGAGAGCAGGAAGATCCAGAGATCCCTCGCCCC...AATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCAGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GGGCAAAGGAACCAAGCTGCAGAGAGTCCACAGGGTTACTCATGGTCATTTTCACGAAGTCCCCAAACTTaGAAGCCTGCACGTCGTACA +
Preference number: 4 (lower is better)
Translates to: GQRNQAAESPQGYSWSFSRSPQT*KPARRT
Trigger: TGTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCG...TGAAAATGACCATGAGTAACCCTGTGGACTCTCTGCAGCTTGGTTCCTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp ACTGACTGTCCTTACCTGACGATTGAGACTCTCAGGCCCACCAGGTCTGCTTCTTTCAAGCCCTCCTTCTaGAGAACCTCAACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: TDCPYLTIETLRPTRSASFKPSF*RTSTVS
Trigger: GGAAACTGTTGAGGTTCTTCAGAAGGAGGGCTTGAA...AGAAGCAGACCTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp AGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCGGACAATGTACACACTaGGTGGAGGCGGATCCCGTG +
Preference number: 4 (lower is better)
Translates to: SLLKYASQAAFLYISAASGQCTH*VEADPV
Trigger: CACGGGATCCGCCTCCACTCAGTGTGTACATTGTCC...GGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp AACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCGCCTTTCACAACTCCTaGGCCTGGCACCACGTGAGC +
Preference number: 4 (lower is better)
Translates to: NTKSTQIRFPSSFSVHLCAFHNS*AWHHVS
Trigger: GCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAGGC...GCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp ATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: IGTSFANNFLWAIVLLAKGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...CTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp AACAACAAATTCAGAGTGCTCCTCAGCCATTCTAACCGCTGCTCTAGTGTAGTCGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: NNKFRVLLSHSNRCSSVVGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...GACTACACTAGAGCAGCGGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CTGTCTGTGCACAAGGGCACCCCCGAAGACATGGTTGTCCTCATGAGAACCTTGGCTCAAACACCACCTTaGATGTGGGCTTTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LSVHKGTPEDMVVLMRTLAQTPP*MWAFSL
Trigger: TAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGC...CAAGGTTCTCATGAGGACAACCATGTCTTCGGGGGTGCCCTTGTGCACAGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp ACTGACTGTCCTTACCTGACGATTGAGACTCTCAGGCCCACCAGGTCTGCTTCTTGTCCTCTAAAGCTTTaGTGCCAGACTGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: TDCPYLTIETLRPTRSASCPLKL*CQTGIL
Trigger: CAGAATCCCAGTCTGGCATCAAAGCTTTAGAGGACA...AGAAGCAGACCTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TGTGAAATAGGGTTCATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGACACTCGAGAGGCTCTTaGGAGCTACTTGAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: CEIGFINRNSACVLEMAGHSRGS*ELLESS
Trigger: ACTACTCTCAAGTAGCTCTCAAGAGCCTCTCGAGTG...TCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGATGAACCCTATTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GGGCAAAGGAACCAAGCTGCAGAGAGTCCACAGGGTTACTCATGGTCATTTTCAACAGACCTCCTCTGCTaGCAGTTCCCCACCCTTATT +
Preference number: 4 (lower is better)
Translates to: GQRNQAAESPQGYSWSFSTDLLC*QFPTLI
Trigger: AATAAGGGTGGGGAACTGTCAGCAGAGGAGGTCTGT...TGAAAATGACCATGAGTAACCCTGTGGACTCTCTGCAGCTTGGTTCCTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTCAATGGCCCCAAAGCTaGACGAGCGACCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIIQWPQS*TSDRHC
Trigger: ACAATGGCGGTCGCTCGTGCAGCTTTGGGGCCATTG...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACACCAAACTTGAAAGCCTaGACGTCGTACAGACCCGTC +
Preference number: 4 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTPNLKA*TSYRPV
Trigger: GACGGGTCTGTACGACGTGCAGGCTTTCAAGTTTGG...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGAGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: SEPRLPITSCGLLYCWPRAVETR*PADRCR
Trigger: TCTACATCGATCTGCGGGGCATCGTGTCTCGACCGC...TCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp ATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: IGTSFANNFLWAIVLLAKAVETR*PADRCR
Trigger: TCTACATCGATCTGCGGGGCATCGTGTCTCGACCGC...CTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACATTGTCCTTGCCTCCCTaGTCTCTGTCCAACAGCACT +
Preference number: 4 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTLSLPP*SLSNST
Trigger: AGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAA...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp AAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACGGATCCCGTGCGCCTaGAACTTGTCCTTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KHSNTKSTQIRFPSSFSVRIPCA*NLSLPP
Trigger: GGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCG...TACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp AGCCATTCTAACCGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGATGTGTTTCCTATATCTaGAAACTTCCGGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SHSNRCSSVVPSGQGAGGCVSYI*KLPVFK
Trigger: TTTGAAGACCGGAAGTTTGCAGATATAGGAAACACA...TCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp ATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAAAGCCATTCTAACCGCTaGTCTAGTGTAGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: INRNSACVLEMAGAHISKSHSNR*SSVVPS
Trigger: ACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT...TTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CACAGACCTCCTCTGCTGACAGTTCCCCACCCTTATTTTGGGTGTCAACTGCCCAAGATTATCTCCTCCTaGTTCCAACTGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: HRPPLLTVPHPYFGCQLPKIISS*FQLNSW
Trigger: CCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTT...GGGCAGTTGACACCCAAAATAAGGGTGGGGAACTGTCAGCAGAGGAGGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CTGAAGAACAGCGCTTGTATAGCCCAAGTTCTTCTCTGCCTGAATCAACTTGTCTCCTGTGCCACTTCCTaGAGGTGGGCCCCAAATGAG +
Preference number: 4 (lower is better)
Translates to: LKNSACIAQVLLCLNQLVSCATS*RWAPNE
Trigger: CTCATTTGGGGCCCACCTGCAGGAAGTGGCACAGGA...GACAAGTTGATTCAGGCAGAGAAGAACTTGGGCTATACAAGCGCTGTTCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGGCAAAGGAACCAAGCTaGAGAGAGTCCACAGGGTTA +
Preference number: 4 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLAKEPS*RESTGL
Trigger: TAACCCTGTGGACTCTCTGCAGCTTGGTTCCTTTGC...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp ACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTCAACTGGGTGGATCCTaGGCAGCTCTGCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: TPSLLKYASQAAFLYISAQLGGS*AALHVH
Trigger: GTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTG...AGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CAGCACATCACTCCAAAGGCCTCTCAACATATCACTCCAACACTGAAGACACCTTTCGATGCAACTGGGTaGATCCTGGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QHITPKASQHITPTLKTPFDATG*ILGSSA
Trigger: TGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAA...AGGTGTCTTCAGTGTTGGAGTGATATGTTGAGAGGCCTTTGGAGTGATGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGAGACATGGGGTCGGGCTATTGTACTGTTaGCCAAGATTATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LHSISLTDILCTPWRHGVGLLYC*PRLSPP
Trigger: AGGAGGAGATAATCTTGGCCAACAGTACAATAGCCC...GACCCCATGTCTCCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CCTATAGCACCAGCTAATCTGGAAGCTGAGGTGGGAGGATCACCTGGGAGGTCGCTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: PIAPANLEAEVGGSPGRSLTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...CGACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGATTAGCTGGTGCTATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp AGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAAGGACAGTCTATAATGTTACTCTaGAGCCACAGGAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RNSACVLEMAGAHISKGQSIMLL*SHRKLR
Trigger: CCTGAGCTTCCTGTGGCTCCAGAGTAACATTATAGA...CTGTCCTTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 72 bp CTGGGCAGCTCTGCACGTGCACCGAAGCTGAGTTCTTaGGGTGCTTCCTTTATAGAAAGGGGAGAACCATTA +
Preference number: 4 (lower is better)
Translates to: LGSSARAPKLSS*GASFIERGEPL
Trigger: TAATGGTTCTCCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR TCA 90 bp AGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAAGGACAGACTCCTGGAGTCAAGTaGAGAAATTCTGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: RNSACVLEMAGAHISKGQTPGVK*RNSGFM
Trigger: CATGAAACCAGAATTTCTTCACTTGACTCCAGGAGT...CTGTCCTTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TCTGAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SEALKHQVYSNTLPKQLFGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...GAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp CAGCACATCACTCCAAAGGCCTCTCAACATATCACTCCAACACTGAAGACACCTTCAGTAGCACAAGGGTaGGTGTTGGGACTGAGATCC +
Preference number: 4 (lower is better)
Translates to: QHITPKASQHITPTLKTPSVAQG*VLGLRS
Trigger: GGATCTCAGTCCCAACACTCACCCTTGTGCTACTGA...AGGTGTCTTCAGTGTTGGAGTGATATGTTGAGAGGCCTTTGGAGTGATGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp CAGCACATCACTCCAAAGGCCTCTCAACATATCACTCCAACACTGAAGACACCTCTGACTGTCCTTACCTaGCGATTGAGACTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QHITPKASQHITPTLKTPLTVLT*RLRLSG
Trigger: GCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAG...AGGTGTCTTCAGTGTTGGAGTGATATGTTGAGAGGCCTTTGGAGTGATGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp ATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCACAATGGCCCCAAAGCTaGACGAGCGACCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: ISEPRLPITSCGLLYCWPQWPQS*TSDRHC
Trigger: ACAATGGCGGTCGCTCGTGCAGCTTTGGGGCCATTG...TGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp ACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTCGGATCCCGTGCGCCTaGAACTTGTCCTTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TYNDDIGTSFANNFLWAIRIPCA*NLSLPP
Trigger: GGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCG...AATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTTGGAGGCGGATCCCGTaGGCCTGCAACTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LKHQVYSNTLPKQLFCTSWRRIP*ACNLSL
Trigger: CAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCA...AGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TCAAGAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTGGAGGCGGATCCCGTaGGCCTGCAACTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SRTHGILPELSTPSSHPEWRRIP*ACNLSL
Trigger: CAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCA...CTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTGATCCTGGGCAGCTCTaGACGTGCACCGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LKHQVYSNTLPKQLFCTSDPGQL*TCTEAE
Trigger: CTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATC...AGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGATCCTGGGCAGCTCTaGACGTGCACCGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QTPSLLKYASQAAFLYISDPGQL*TCTEAE
Trigger: CTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATC...AGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTCCTGAGAAGCTTCGATaGAACTGGGTGGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIIPEKLR*NWVDPG
Trigger: CCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGG...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTGGATCCTAAAGCATCTGCTAGCTaGAACAGCTCTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GLLLLHKPEKLRCNWVDPKASAS*NSSLAS
Trigger: ACTGGCCAGAGAGCTGTTGCAGCTAGCAGATGCTTT...AGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTGGCAGGCCCACTTCTTaGAGGCCTTTCACAACTCCT +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIIGRPTS*RPFTTP
Trigger: AGGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCC...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTGGATCCTAGCCATTCTAACCGCTaGTCTAGTGTAGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GLLLLHKPEKLRCNWVDPSHSNR*SSVVPS
Trigger: ACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT...AGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
CDS-3UTR GCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACATCTGTACATCTCTGCTaGTTCCAGACGATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTSVHLC*FQTISC
Trigger: GCAGCTGATCGTCTGGAAGCAGCAGAGATGTACAGA...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CTGCTCTCTGTCCAACAGCACTATGGCATCAGTGACCTTCAAGCCCTCCTTCTGTTTTCTGTACATCTCTaGTGCTTCCAGACGATCAGC +
Preference number: 4 (lower is better)
Translates to: LLSVQQHYGISDLQALLLFSVHL*CFQTIS
Trigger: GCTGATCGTCTGGAAGCAGCAGAGATGTACAGAAAA...CAGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACCAGACCCGTCACCAATaGCCCCAAAGCTGCACGAGC +
Preference number: 4 (lower is better)
Translates to: DYFQPVTFRRTTYLQCLHQTRHQ*PQSCTS
Trigger: GCTCGTGCAGCTTTGGGGCCATTGGTGACGGGTCTG...GTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTGCAGATCGATGTAGATaGGGGAGGAAAGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIIADRCR*GRKARS
Trigger: AGAGCGGGCTTTCCTCCCCCATCTACATCGATCTGC...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGAGCAGATCGATGTAGATaGGGGAGGAAAGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: SEPRLPITSCGLLYCWPRADRCR*GRKARS
Trigger: AGAGCGGGCTTTCCTCCCCCATCTACATCGATCTGC...TCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTAATGTACACACTGAGTaGAGGCGGATCCCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: EALKHQVYSNTLPKQLFCNVHTE*RRIPCA
Trigger: GGCGCACGGGATCCGCCTCCACTCAGTGTGTACATT...ACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTCAACTGGGTGGATCCTaGGCAGCTCTGCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: QTPSLLKYASQAAFLYISQLGGS*AALHVH
Trigger: GTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTG...AGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCAGATTCGATGCAACTGGGTaGATCCTGGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLKYASQAAFLYISAASRFDATG*ILGSSA
Trigger: TGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAA...TCTGGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTTCGATGCAACTGGGTaGATCCTGGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSLLKYASQAAFLYISAAFDATG*ILGSSA
Trigger: TGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAA...AGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TGGGCTTATGTTCTACAGAATGCCTCGAGTAGCTGGAGAGGCTGGGGGATGGCGTTCCAACTGAACTCCTaGAGTCAAGTGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: WAYVLQNASSSWRGWGMAFQLNS*SQVKKF
Trigger: GAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAA...CGCCATCCCCCAGCCTCTCCAGCTACTCGAGGCATTCTGTAGAACATAAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp ATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAACTTACACAGGCCCTGTaGAAGAATCCAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: INRNSACVLEMAGAHISKLTQAL*KNPSRN
Trigger: ATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAG...TTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCAGAATCTGGAAGCTGAGGTaGGAGGATCACCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LLKYASQAAFLYISAASRIWKLR*EDHLGG
Trigger: ACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGAT...TCTGGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: LISAIRRHPRCKGRPTSCIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...GCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp CCCTCTTTGGAGAGTGAGCAATGGCAGTTCTGGGAACCAGCCCATGTGGATACCTCTACTAATGACCGTTaGGACAATTATGTGGGATCC +
Preference number: 4 (lower is better)
Translates to: PSLESEQWQFWEPAHVDTSTNDR*DNYVGS
Trigger: GGATCCCACATAATTGTCCCAACGGTCATTAGTAGA...GGTATCCACATGGGCTGGTTCCCAGAACTGCCATTGCTCACTCTCCAAAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGGGCTTACAGATCAGCTaGGGCTTTCATACATTGGAC +
Preference number: 4 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLGLQIS*GFHTLD
Trigger: GTCCAATGTATGAAAGCCCCAGCTGATCTGTAAGCC...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCCGAAGTCCCCAAACTTaGAAGCCTGCACGTCGTACA +
Preference number: 4 (lower is better)
Translates to: DIGTSFANNFLWAIVLLARSPQT*KPARRT
Trigger: TGTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCG...GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TCTGAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCGAGCCTGGCACCACGTaGGCATTTACTAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: SEALKHQVYSNTLPKQLFEPGTT*AFTRSA
Trigger: GGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTC...GAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp GAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAAGCCTTTCACAACTCCTaGGCCTGGCACCACGTGAGC +
Preference number: 4 (lower is better)
Translates to: ELMAFCQSYQLLHHIQSKAFHNS*AWHHVS
Trigger: GCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAGGC...TTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
CDS-3UTR TCA 90 bp CTGTCTGTGCACAAGGGCACCCCCGAAGACATGGTTGTCCTCATGAGAACCTTGAAGTTCTTCTCTGCCTaGATCAACTTGTCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: LSVHKGTPEDMVVLMRTLKFFSA*INLSSK
Trigger: TTTAGAGGACAAGTTGATTCAGGCAGAGAAGAACTT...CAAGGTTCTCATGAGGACAACCATGTCTTCGGGGGTGCCCTTGTGCACAGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp ACCAACAACAAATTCAGAGTGCTCCTCAGCCATTCTAACCGCTGCTCTAGTGTACCAAACTTGAAAGCCTaGACGTCGTACAGACCCGTC +
Preference number: 4 (lower is better)
Translates to: TNNKFRVLLSHSNRCSSVPNLKA*TSYRPV
Trigger: GACGGGTCTGTACGACGTGCAGGCTTTCAAGTTTGG...TACACTAGAGCAGCGGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTTGTCCTTGCCTCCCTaGTCTCTGTCCAACAGCACT +
Preference number: 4 (lower is better)
Translates to: PSLLKYASQAAFLYISAALSLPP*SLSNST
Trigger: AGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAA...AGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTGTCCTTGCCTCCCTaGTCTCTGTCCAACAGCACT +
Preference number: 4 (lower is better)
Translates to: SEPRLPITSCGLLYCWPRLSLPP*SLSNST
Trigger: AGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAA...TCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAAATCACGGATCCCGTGCGCCTaGAACTTGTCCTTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SWHFARVINSFITSRVKSRIPCA*NLSLPP
Trigger: GGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCG...TGATTTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TGGAGTCAAGTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAATGGAGGCGGATCCCGTaGGCCTGCAACTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: WSQVKKFWFHAYSGARNKWRRIP*ACNLSL
Trigger: CAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCA...TTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTGACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR GCA 90 bp ATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAGGGCAGCTCTGCACGTaGACCGAAGCTGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ISEPRLPITSCGLLYCWPGQLCT*TEAEFF
Trigger: AAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCC...TGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTCCTGAGAAGCTTCGATaGAACTGGGTGGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: EALKHQVYSNTLPKQLFCPEKLR*NWVDPG
Trigger: CCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGG...ACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CCTCCCTGCTCTCTGTCCAACAGCACTATGGCATCAGTGACCTTCAAGCCCTCCTGTGTTTCCTATATCTaGAAACTTCCGGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: PPCSLSNSTMASVTFKPSCVSYI*KLPVFK
Trigger: TTTGAAGACCGGAAGTTTGCAGATATAGGAAACACA...GGAGGGCTTGAAGGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR GCA 90 bp AACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCGGCAGGCCCACTTCTTaGAGGCCTTTCACAACTCCT +
Preference number: 4 (lower is better)
Translates to: NTKSTQIRFPSSFSVHLCGRPTS*RPFTTP
Trigger: AGGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCC...GCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCAGGACAGCCCTCACCCTaGCCCTGCTCAAACACCACC +
Preference number: 4 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPGQPSP*PCSNTT
Trigger: GGTGGTGTTTGAGCAGGGGCAGGGTGAGGGCTGTCC...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp GCTTACCTCCCCTCTACTAATGACCGTTGGGACAATTATGTGGGATCCTTAAGCGGCTGGAGTAGGCTCTaGTCTACTTTCTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: AYLPSTNDRWDNYVGSLSGWSRL*STFSCS
Trigger: AGAGCAAGAGAAAGTAGAGCAGAGCCTACTCCAGCC...GCTTAAGGATCCCACATAATTGTCCCAACGGTCATTAGTAGAGGGGAGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp TATGCCACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGAATGTACACACTGAGTaGAGGCGGATCCCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: YATTYNDDIGTSFANNFLNVHTE*RRIPCA
Trigger: GGCGCACGGGATCCGCCTCCACTCAGTGTGTACATT...CAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TGGAGTCAAGTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAACAACTGGGTGGATCCTaGGCAGCTCTGCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: WSQVKKFWFHAYSGARNKQLGGS*AALHVH
Trigger: GTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTG...TTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTGACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GATTATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGAAGCTTCGATGCAACTaGGTGGATCCTGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: DYLLLLPTELLESSEEILKLRCN*VDPGQL
Trigger: GAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTT...CAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp TCACCCTGCCCCTGCTCAAACACCACCTTGAATGTGGGCTTTCTCTTTATTATTGCTGCAACAGCTCTCTaGCCAGTGAAACATCAGCAG +
Preference number: 4 (lower is better)
Translates to: SPCPCSNTTLNVGFLFIIAATAL*PVKHQQ
Trigger: CTGCTGATGTTTCACTGGCCAGAGAGCTGTTGCAGC...AATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCAGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp AACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCATCTGGAAGCTGAGGTaGGAGGATCACCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: NTKSTQIRFPSSFSVHLCIWKLR*EDHLGG
Trigger: ACCTCCCAGGTGATCCTCCCACCTCAGCTTCCAGAT...GCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTGAAGAACAGCGCTTGTATAGCCCAAGTTCTTCTCTGCCTGAATCAACTTGTCTTGGAGAGTGAGCAATaGCAGTTCTGGGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: LKNSACIAQVLLCLNQLVLESEQ*QFWEPA
Trigger: GGCTGGTTCCCAGAACTGCCATTGCTCACTCTCCAA...GACAAGTTGATTCAGGCAGAGAAGAACTTGGGCTATACAAGCGCTGTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CAGCACATCACTCCAAAGGCCTCTCAACATATCACTCCAACACTGAAGACACCTCTGGAGATGCAGCACTaGGGACATGAAGCCCAAATT +
Preference number: 4 (lower is better)
Translates to: QHITPKASQHITPTLKTPLEMQH*GHEAQI
Trigger: AATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAG...AGGTGTCTTCAGTGTTGGAGTGATATGTTGAGAGGCCTTTGGAGTGATGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp AGTCTAGTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCATTCTGTGCACCCCATaGAGACATGGGGTCCCTATA +
Preference number: 4 (lower is better)
Translates to: SLVPWRDRKDPQMWKTLTILCTP*RHGVPI
Trigger: TATAGGGACCCCATGTCTCCATGGGGTGCACAGAAT...GGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGACTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp GCTTACCTCCCCTCTACTAATGACCGTTGGGACAATTATGTGGGATCCTTAAGCAAGCAGCTATTTCGCTaGGAGAGATCGCTGATGCAG +
Preference number: 4 (lower is better)
Translates to: AYLPSTNDRWDNYVGSLSKQLFR*ERSLMQ
Trigger: CTGCATCAGCGATCTCTCCCAGCGAAATAGCTGCTT...GCTTAAGGATCCCACATAATTGTCCCAACGGTCATTAGTAGAGGGGAGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TCTGAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCCGAAGTCCCCAAACTTaGAAGCCTGCACGTCGTACA +
Preference number: 4 (lower is better)
Translates to: SEALKHQVYSNTLPKQLFRSPQT*KPARRT
Trigger: TGTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCG...GAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp CTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCAGAACACGGTGTCAAAACTaGTGCCTGCATTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLKYASQAAFLYISAASRTRCQN*CLHFGQ
Trigger: CTGCCCAAAATGCAGGCATCAGTTTTGACACCGTGT...TCTGGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp ATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGACACGGTGTCAAAACTaGTGCCTGCATTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: IGTSFANNFLWAIVLLAKTRCQN*CLHFGQ
Trigger: CTGCCCAAAATGCAGGCATCAGTTTTGACACCGTGT...CTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp AGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACGCACTATGGCATCAGTaGCCTTCAAGCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: STQTPSLLKYASQAAFLYALWHQ*PSSPPS
Trigger: AGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGC...GTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TGCCCCTGCTCAAACACCACCTTGAATGTGGGCTTTCTCTTTATTATTAATGAAGGACAATGTACACACTaGGTGGAGGCGGATCCCGTG +
Preference number: 4 (lower is better)
Translates to: CPCSNTTLNVGFLFIINEGQCTH*VEADPV
Trigger: CACGGGATCCGCCTCCACTCAGTGTGTACATTGTCC...TTCATTAATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp ACTGACTGTCCTTACCTGACGATTGAGACTCTCAGGCCCACCAGGTCTGCTTCTACAAAGACATTCTCCTaGATAAACCTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: TDCPYLTIETLRPTRSASTKTFS*INLFTL
Trigger: GAGAGTGAAGAGGTTTATTCAGGAGAATGTCTTTGT...AGAAGCAGACCTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTACACGTGCACCGAAGCTaGGTTCTTTGGGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLHVHRS*VLWVLP
Trigger: AGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTG...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp CAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTCACGTGCACCGAAGCTaGGTTCTTTGGGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QTPSLLKYASQAAFLYISHVHRS*VLWVLP
Trigger: AGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTG...AGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp AGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACCAGACGATCAGCTGCTaGGATTATGCCACGACCTAC +
Preference number: 4 (lower is better)
Translates to: STQTPSLLKYASQAAFLYQTISC*DYATTY
Trigger: GTAGGTCGTGGCATAATCTCAGCAGCTGATCGTCTG...GTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp AGAAAGGGGAGAACCATTATGATTCGCTGCCACAAAGACATTCTCCTGAATAAAGGCTGCAATGAGCCGTaGTCTCACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: RKGRTIMIRCHKDILLNKGCNEP*SHHCTP
Trigger: TGGAGTGCAGTGGTGAGATCACGGCTCATTGCAGCC...TTTATTCAGGAGAATGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR TCA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGGTCATTTTCAATGACTaGCACTTGGTCCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLVIFND*HLVHCV
Trigger: AACACAGTGGACCAAGTGTCAGTCATTGAAAATGAC...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp TCTGAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCCCAAACTTGAAAGCCTaGACGTCGTACAGACCCGTC +
Preference number: 4 (lower is better)
Translates to: SEALKHQVYSNTLPKQLFPNLKA*TSYRPV
Trigger: GACGGGTCTGTACGACGTGCAGGCTTTCAAGTTTGG...GAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGGTTTTGTCCTTGCCTCCCTaGTCTCTGTCCAACAGCACT +
Preference number: 4 (lower is better)
Translates to: YLLLLPTELLESSEEILVLSLPP*SLSNST
Trigger: AGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAA...AACCAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR GCA 90 bp AACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTTGTCCTTGCCTCCCTaGTCTCTGTCCAACAGCACT +
Preference number: 4 (lower is better)
Translates to: NTKSTQIRFPSSFSVHLCLSLPP*SLSNST
Trigger: AGTGCTGTTGGACAGAGAGCAGGGAGGCAAGGACAA...GCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp ATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCTGCAACTTGTCCTTaGCTCCCTGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: MISEPRLPITSCGLLYCWPATCP*LPALCP
Trigger: TGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGG...CCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp ATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGGGGCAGCTCTGCACGTaGACCGAAGCTGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: MISEPRLPITSCGLLYCWGQLCT*TEAEFF
Trigger: AAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCC...CCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAAATCAGATCCTGGGCAGCTCTaGACGTGCACCGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SWHFARVINSFITSRVKSDPGQL*TCTEAE
Trigger: CTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATC...TGATTTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCAGAAGCCATTCTAACCGCTaGTCTAGTGTAGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLKYASQAAFLYISAASRSHSNR*SSVVPS
Trigger: ACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT...TCTGGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp TCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATCTGTACATCTCTGCTaGTTCCAGACGATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SEPRLPITSCGLLYCWPRSVHLC*FQTISC
Trigger: GCAGCTGATCGTCTGGAAGCAGCAGAGATGTACAGA...TCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TATGCCACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGGCAGATCGATGTAGATaGGGGAGGAAAGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: YATTYNDDIGTSFANNFLADRCR*GRKARS
Trigger: AGAGCGGGCTTTCCTCCCCCATCTACATCGATCTGC...CAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TTGGATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTAATGTACACACTGAGTaGAGGCGGATCCCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: LDYFQPVTFRRTTYLQCLNVHTE*RRIPCA
Trigger: GGCGCACGGGATCCGCCTCCACTCAGTGTGTACATT...AAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTGCTCTCTGTCCAACAGCACTATGGCATCAGTGACCTTCAAGCCCTCCTTCTGGAATCTCCAGCATTTTaGACAATGTACACACTGAGT +
Preference number: 4 (lower is better)
Translates to: LLSVQQHYGISDLQALLLESPAF*TMYTLS
Trigger: ACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTC...CAGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCACAACTGGGTGGATCCTaGGCAGCTCTGCACGTGCAC +
Preference number: 4 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPQLGGS*AALHVH
Trigger: GTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTG...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTATTCGATGCAACTGGGTaGATCCTGGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLFDATG*ILGSSA
Trigger: TGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAA...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCAAGCTTCGATGCAACTaGGTGGATCCTGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SNTKSTQIRFPSSFSVHLKLRCN*VDPGQL
Trigger: GAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTT...GAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp AAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGAAGCTTCGATGCAACTaGGTGGATCCTGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KHQVYSNTLPKQLFCTSLKLRCN*VDPGQL
Trigger: GAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTT...CAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp ATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAGCTGCAACAGCTCTCTaGCCAGTGAAACATCAGCAG +
Preference number: 4 (lower is better)
Translates to: ISEPRLPITSCGLLYCWPAATAL*PVKHQQ
Trigger: CTGCTGATGTTTCACTGGCCAGAGAGCTGTTGCAGC...TGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GCAACAGCTCTCTGGCCAGTGAAACATCAGCAGATAGACACAGATTGGTCTCCTGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ATALWPVKHQQIDTDWSPANNFL*AIVLLA
Trigger: GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGC...AGGAGACCAATCTGTGTCTATCTGCTGATGTTTCACTGGCCAGAGAGCTGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GCAACAGCTCTCTGGCCAGTGAAACATCAGCAGATAGACACAGATTGGTCTCCTAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACA +
Preference number: 4 (lower is better)
Translates to: ATALWPVKHQQIDTDWSPKDPQM*KTLTQT
Trigger: TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTT...AGGAGACCAATCTGTGTCTATCTGCTGATGTTTCACTGGCCAGAGAGCTGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATCTGCCCAGGATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: LSQLLSLAPREHLLDLPRIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...CCTGGGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GGGGATGGCGTTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGAAGCAAATACCCAAATaGAATCTTAGACCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: GDGVLHSISLTDILCTPWKQIPK*NLRPPN
Trigger: ATTAGGAGGTCTAAGATTCCATTTGGGTATTTGCTT...CCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAACGCCATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp TCTTTGTATTTCTATTGCGGCCTTCCTTTGGAAGGGTTATGGGGAAAACAAAGGCACCCCATGGAGACATaGGGTCCCTATATTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SLYFYCGLPLEGLWGKQRHPMET*GPYIPH
Trigger: GTGGGGAATATAGGGACCCCATGTCTCCATGGGGTG...CCTTTGTTTTCCCCATAACCCTTCCAAAGGAAGGCCGCAATAGAAATACAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp TCACCCTGCCCCTGCTCAAACACCACCTTGAATGTGGGCTTTCTCTTTATTATTGAGACAATGCAGTGTTaGGACATTGGAGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: SPCPCSNTTLNVGFLFIIETMQC*DIGGRT
Trigger: AGTCCTGCCTCCAATGTCCCAACACTGCATTGTCTC...AATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp AACAACAAATTCAGAGTGCTCCTCAGCCATTCTAACCGCTGCTCTAGTGTAGTCTTCAAGCCCTCCTTCTaGAGAACCTCAACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: NNKFRVLLSHSNRCSSVVFKPSF*RTSTVS
Trigger: GGAAACTGTTGAGGTTCTTCAGAAGGAGGGCTTGAA...GACTACACTAGAGCAGCGGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR TCA 90 bp AAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGGCACTATGGCATCAGTaGCCTTCAAGCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KHQVYSNTLPKQLFCTSLALWHQ*PSSPPS
Trigger: AGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGC...CAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp AGAACCTCAACAGTTTCCAAAACACTAGATCCACTGGTGACAACATCTTCAATGCACGTGCACCGAAGCTaGGTTCTTTGGGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RTSTVSKTLDPLVTTSSMHVHRS*VLWVLP
Trigger: AGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTG...CATTGAAGATGTTGTCACCAGTGGATCTAGTGTTTTGGAAACTGTTGAGGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TGGAGTCAAGTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAAGAGCCTGGCACCACGTaGGCATTTACTAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: WSQVKKFWFHAYSGARNKEPGTT*AFTRSA
Trigger: GGCAGATCTAGTAAATGCTCACGTGGTGCCAGGCTC...TTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTGACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp CTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCAGACGATCAGCTGCTaGGATTATGCCACGACCTAC +
Preference number: 4 (lower is better)
Translates to: LKHQVYSNTLPKQLFCTSQTISC*DYATTY
Trigger: GTAGGTCGTGGCATAATCTCAGCAGCTGATCGTCTG...AGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TTGGGACAATTATGTGGGATCCTTAAGCAAATACCCAAATGGAATCTTAGACCTACCGGGTACTTTGGATaGGAACTGCACCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGQLCGILKQIPKWNLRPTGYFG*ELHPGQ
Trigger: CTGGCCTGGGTGCAGTTCTCATCCAAAGTACCCGGT...AGGTCTAAGATTCCATTTGGGTATTTGCTTAAGGATCCCACATAATTGTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TGCCCCTGCTCAAACACCACCTTGAATGTGGGCTTTCTCTTTATTATTAATGAAGGCAGGAGGATCACTTaGGCTAAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: CPCSNTTLNVGFLFIINEGRRIT*AKEFET
Trigger: GGTCTCGAACTCCTTAGCTCAAGTGATCCTCCTGCC...TTCATTAATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACACATGGTTGTCCTCATaGGAACCTTGGTTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: DYFQPVTFRRTTYLQCLHTWLSS*EPWLCG
Trigger: GCCGCACAACCAAGGTTCTCATGAGGACAACCATGT...GTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCAGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPAVETR*PADRCR
Trigger: TCTACATCGATCTGCGGGGCATCGTGTCTCGACCGC...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAAGGGCAGCTCTGCACGTaGACCGAAGCTGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ELMAFCQSYQLLHHIQSKGQLCT*TEAEFF
Trigger: AAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCC...TTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTGGATCCTTTGGTCTCCTTCTTTTaGATAAGCCTGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLLLLHKPEKLRCNWVDPLVSFF*ISLRSF
Trigger: GAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAA...AGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR GCA 90 bp AGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACAAAGCATCTGCTAGCTaGAACAGCTCTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: STQTPSLLKYASQAAFLYKASAS*NSSLAS
Trigger: ACTGGCCAGAGAGCTGTTGCAGCTAGCAGATGCTTT...GTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGAAATTCTGGTTTCATaGTTACTCGGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTEILVS*LLGSQK
Trigger: TTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTC...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTGGATCCTGAAATTCTGGTTTCATaGTTACTCGGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GLLLLHKPEKLRCNWVDPEILVS*LLGSQK
Trigger: TTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTC...AGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
CDS-3UTR GCA 90 bp GATTATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGTCTGTACATCTCTGCTaGTTCCAGACGATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DYLLLLPTELLESSEEILSVHLC*FQTISC
Trigger: GCAGCTGATCGTCTGGAAGCAGCAGAGATGTACAGA...CAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CAGCACATCACTCCAAAGGCCTCTCAACATATCACTCCAACACTGAAGACACCTTTTTCTGTACATCTCTaGTGCTTCCAGACGATCAGC +
Preference number: 4 (lower is better)
Translates to: QHITPKASQHITPTLKTPFSVHL*CFQTIS
Trigger: GCTGATCGTCTGGAAGCAGCAGAGATGTACAGAAAA...AGGTGTCTTCAGTGTTGGAGTGATATGTTGAGAGGCCTTTGGAGTGATGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp TTGGATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTAAGCTTCGATGCAACTaGGTGGATCCTGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LDYFQPVTFRRTTYLQCLKLRCN*VDPGQL
Trigger: GAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTT...AAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp AGAACCTCAACAGTTTCCAAAACACTAGATCCACTGGTGACAACATCTTCAATGAAGCTTCGATGCAACTaGGTGGATCCTGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RTSTVSKTLDPLVTTSSMKLRCN*VDPGQL
Trigger: GAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTT...CATTGAAGATGTTGTCACCAGTGGATCTAGTGTTTTGGAAACTGTTGAGGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CCA 90 bp ATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGCTTACACAGGCCCTGTaGAAGAATCCAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: IGTSFANNFLWAIVLLAKLTQAL*KNPSRN
Trigger: ATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAG...CTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TTGGATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTGCCACTTCCTGCAGGTaGGCCCCAAATGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LDYFQPVTFRRTTYLQCLATSCR*APNEKE
Trigger: TTCCTTCTCATTTGGGGCCCACCTGCAGGAAGTGGC...AAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCAAGTAGCTGGAGAGGCTaGGGGATGGCGTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPSSWRG*GMAFST
Trigger: AGTGGAGAACGCCATCCCCCAGCCTCTCCAGCTACT...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CAGCACATCACTCCAAAGGCCTCTCAACATATCACTCCAACACTGAAGACACCTTGTAATAAACCACCCTaGAACTCCATGGCATGCACT +
Preference number: 4 (lower is better)
Translates to: QHITPKASQHITPTLKTPCNKPP*NSMACT
Trigger: AGTGCATGCCATGGAGTTCCAGGGTGGTTTATTACA...AGGTGTCTTCAGTGTTGGAGTGATATGTTGAGAGGCCTTTGGAGTGATGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTATTGCGGCCTTCCTTTaGAAGGGTTATGGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIIIAAFL*KGYGEN
Trigger: GTTTTCCCCATAACCCTTCCAAAGGAAGGCCGCAAT...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTTATCACTTGAGCTCCTaGATCCAACCACGCTTGACA +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIIYHLSS*IQPRLT
Trigger: TGTCAAGCGTGGTTGGATCCAGGAGCTCAAGTGATA...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479719.5
3UTR CAA 72 bp CCCTGGAGATGCAGCACTGGGGACATGAAGCCCAAATaGGACTTTAGAGCAGAAGCTCTTGAAGTAAAAACT +
Preference number: 4 (lower is better)
Translates to: PWRCSTGDMKPK*DFRAEALEVKT
Trigger: AGTTTTTACTTCAAGAGCTTCTGCTCTAAAGTCCAATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 72 bp TCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATaGTACTGTTGGCCAAGATTATCTCCTCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SEPRLPITSCGL*YCWPRLSPPAS
Trigger: GGAAGCAGGAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp GAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAACGAAGTCCCCAAACTTaGAAGCCTGCACGTCGTACA +
Preference number: 4 (lower is better)
Translates to: ELMAFCQSYQLLHHIQSKRSPQT*KPARRT
Trigger: TGTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCG...TTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
CDS-3UTR TCA 90 bp GAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTTTCAAGCCCTCCTTCTaGAGAACCTCAACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: EALKHQVYSNTLPKQLFCFKPSF*RTSTVS
Trigger: GGAAACTGTTGAGGTTCTTCAGAAGGAGGGCTTGAA...ACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TGGAGTCAAGTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAACAGACGATCAGCTGCTaGGATTATGCCACGACCTAC +
Preference number: 4 (lower is better)
Translates to: WSQVKKFWFHAYSGARNKQTISC*DYATTY
Trigger: GTAGGTCGTGGCATAATCTCAGCAGCTGATCGTCTG...TTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTGACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp ATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 4 (lower is better)
Translates to: IGTSFANNFLWAIVLLAKIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...CTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TTGGATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCCAAACTTGAAAGCCTaGACGTCGTACAGACCCGTC +
Preference number: 4 (lower is better)
Translates to: LDYFQPVTFRRTTYLQCLPNLKA*TSYRPV
Trigger: GACGGGTCTGTACGACGTGCAGGCTTTCAAGTTTGG...AAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TGGAGTCAAGTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAACCAAACTTGAAAGCCTaGACGTCGTACAGACCCGTC +
Preference number: 4 (lower is better)
Translates to: WSQVKKFWFHAYSGARNKPNLKA*TSYRPV
Trigger: GACGGGTCTGTACGACGTGCAGGCTTTCAAGTTTGG...TTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTGACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTGCTGAGTTCTTTGGGTaGTTCCTTTATAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PSLLKYASQAAFLYISAAAEFFG*FLYRKG
Trigger: CCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGC...AGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp AGATACCTCCTTCATACTGCTTTTTCACTGTGTTTCCTATATCTGCAAACTTCCCCTGAGAAGCTTCGATaGAACTGGGTGGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: RYLLHTAFSLCFLYLQTSPEKLR*NWVDPG
Trigger: CCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGG...GGAAGTTTGCAGATATAGGAAACACAGTGAAAAAGCAGTATGAAGGAGGTATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
CDS-3UTR GCA 90 bp TCTTTGTATTTCTATTGCGGCCTTCCTTTGGAAGGGTTATGGGGAAAACAAAGGAAAGCATCTGCTAGCTaGAACAGCTCTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLYFYCGLPLEGLWGKQRKASAS*NSSLAS
Trigger: ACTGGCCAGAGAGCTGTTGCAGCTAGCAGATGCTTT...CCTTTGTTTTCCCCATAACCCTTCCAAAGGAAGGCCGCAATAGAAATACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGAACTCATGGCATTTTaGCAGAGTTATCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTELMAF*QSYQLL
Trigger: AAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp ATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAATGTGTTTCCTATATCTaGAAACTTCCGGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: INRNSACVLEMAGAHISKCVSYI*KLPVFK
Trigger: TTTGAAGACCGGAAGTTTGCAGATATAGGAAACACA...TTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCAGAAAGATTATCTCCTCCTaGTTCCAACTGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLKYASQAAFLYISAASRKIISS*FQLNSW
Trigger: CCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTT...TCTGGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp TCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTTTCTGTACATCTCTaGTGCTTCCAGACGATCAGC +
Preference number: 4 (lower is better)
Translates to: SEPRLPITSCGLLYCWPRFSVHL*CFQTIS
Trigger: GCTGATCGTCTGGAAGCAGCAGAGATGTACAGAAAA...TCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TGCCCCTGCTCAAACACCACCTTGAATGTGGGCTTTCTCTTTATTATTAATGAAGCCAGACTGGGATTCTaGTTAGGTAAGAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CPCSNTTLNVGFLFIINEARLGF*LGKRPA
Trigger: TGCAGGCCTCTTACCTAAGCAGAATCCCAGTCTGGC...TTCATTAATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp GGGCAAAGGAACCAAGCTGCAGAGAGTCCACAGGGTTACTCATGGTCATTTTCATGGAACTCCATGGCATaGACTACTAAGCATTTATCA +
Preference number: 4 (lower is better)
Translates to: GQRNQAAESPQGYSWSFSWNSMA*TTKHLS
Trigger: TGATAAATGCTTAGTAGTGCATGCCATGGAGTTCCA...TGAAAATGACCATGAGTAACCCTGTGGACTCTCTGCAGCTTGGTTCCTTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp ACTGACTGTCCTTACCTGACGATTGAGACTCTCAGGCCCACCAGGTCTGCTTCTTATTTAGCTAGATATTaGCGTGTAATAAACCACCCT +
Preference number: 4 (lower is better)
Translates to: TDCPYLTIETLRPTRSASYLARY*RVINHP
Trigger: AGGGTGGTTTATTACACGGCAATATCTAGCTAAATA...AGAAGCAGACCTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp GGGCAAAGGAACCAAGCTGCAGAGAGTCCACAGGGTTACTCATGGTCATTTTCACTGGATCCAGAGAGCTaGAGCAAGTTAAATGTATTT +
Preference number: 4 (lower is better)
Translates to: GQRNQAAESPQGYSWSFSLDPES*SKLNVF
Trigger: AAATACATTTAACTTGCTGCAGCTCTCTGGATCCAG...TGAAAATGACCATGAGTAACCCTGTGGACTCTCTGCAGCTTGGTTCCTTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAACTATGGAGCTGTCTGTaGACAAGGGCACCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKLWSCL*TRAPPK
Trigger: CTTCGGGGGTGCCCTTGTGCACAGACAGCTCCATAG...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp AATGCGGTGATTACAAATTACTCAATATTTCCTAAAGACCATGAGAACTCCAGACCCCAAGTCTCACCCTaGAGGGCTGCTAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NAVITNYSIFPKDHENSRPQVSP*RAAKCR
Trigger: CCTGCACTTAGCAGCCCTGCAGGGTGAGACTTGGGG...TCTGGAGTTCTCATGGTCTTTAGGAAATATTGAGTAATTTGTAATCACCGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp AGATACCTCCTTCATACTGCTTTTTCACTGTGTTTCCTATATCTGCAAACTTCCTTCGATGCAACTGGGTaGATCCTGGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RYLLHTAFSLCFLYLQTSFDATG*ILGSSA
Trigger: TGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAA...GGAAGTTTGCAGATATAGGAAACACAGTGAAAAAGCAGTATGAAGGAGGTATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
CDS-3UTR CCA 90 bp TTGGATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTGCTGCAACAGCTCTCTaGCCAGTGAAACATCAGCAG +
Preference number: 4 (lower is better)
Translates to: LDYFQPVTFRRTTYLQCLAATAL*PVKHQQ
Trigger: CTGCTGATGTTTCACTGGCCAGAGAGCTGTTGCAGC...AAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTGGATCCTCAAGTGAAGAAATTCTaGTTTCATGCTTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: GLLLLHKPEKLRCNWVDPQVKKF*FHAYSG
Trigger: TCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTG...AGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
CDS-3UTR CCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIIANNFL*AIVLLA
Trigger: GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGC...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTCTTACACAGGCCCTGTaGAAGAATCCAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: EALKHQVYSNTLPKQLFCLTQAL*KNPSRN
Trigger: ATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAG...ACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp AACAACAAATTCAGAGTGCTCCTCAGCCATTCTAACCGCTGCTCTAGTGTAGTCAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACA +
Preference number: 4 (lower is better)
Translates to: NNKFRVLLSHSNRCSSVVKDPQM*KTLTQT
Trigger: TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTT...GACTACACTAGAGCAGCGGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACTCCCCACCCTTATTTTaGGTGTCAACTGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: DYFQPVTFRRTTYLQCLHSPPLF*VSTALP
Trigger: AGGAAGGGCAGTTGACACCCAAAATAAGGGTGGGGA...GTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 72 bp TCTCTGGCCAGTGAAACATCAGCAGATAGACACAGATaGGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLASETSADRHR*VSFFCISLRSF
Trigger: GAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAATCTGTGTCTATCTGCTGATGTTTCACTGGCCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TCAAGAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGAAAATATCTGCAACCTaGCTCAGAAGACGCGGTCGA +
Preference number: 4 (lower is better)
Translates to: SRTHGILPELSTPSSHPEKISAT*LRRRGR
Trigger: TCGACCGCGTCTTCTGAGTCAGGTTGCAGATATTTT...CTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474588.5
CDS-3UTR TCA 90 bp CAAGATTATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTTTCAAGCCCTCCTTCTaGAGAACCTCAACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: QDYLLLLPTELLESSEEIFKPSF*RTSTVS
Trigger: GGAAACTGTTGAGGTTCTTCAGAAGGAGGGCTTGAA...AATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR TCA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTATTCAAGCCCTCCTTCTaGAGAACCTCAACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLFKPSF*RTSTVS
Trigger: GGAAACTGTTGAGGTTCTTCAGAAGGAGGGCTTGAA...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TCTTTGTATTTCTATTGCGGCCTTCCTTTGGAAGGGTTATGGGGAAAACAAAGGAGGGGAGAACCATTATaGTTCGCTGCCACAAAGACA +
Preference number: 4 (lower is better)
Translates to: SLYFYCGLPLEGLWGKQRRGEPL*FAATKT
Trigger: TGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCT...CCTTTGTTTTCCCCATAACCCTTCCAAAGGAAGGCCGCAATAGAAATACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACAGGGGAGAACCATTATaGTTCGCTGCCACAAAGACA +
Preference number: 4 (lower is better)
Translates to: DYFQPVTFRRTTYLQCLHRGEPL*FAATKT
Trigger: TGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCT...GTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp GGGTGCTTCCTTTATAGAAAGGGGAGAACCATTATGATTCGCTGCCACAAAGACACTCCTGGAGTCAAGTaGAGAAATTCTGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: GCFLYRKGRTIMIRCHKDTPGVK*RNSGFM
Trigger: CATGAAACCAGAATTTCTTCACTTGACTCCAGGAGT...GTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCTTTCTATAAAGGAAGCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
CDS-3UTR TCA 90 bp TATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGGTTATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 4 (lower is better)
Translates to: YLLLLPTELLESSEEILVIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...AACCAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR TCA 90 bp AACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 4 (lower is better)
Translates to: NTKSTQIRFPSSFSVHLCIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...GCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp ACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 4 (lower is better)
Translates to: TTYNDDIGTSFANNFLWAIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...AGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp ATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAATTATTTCCAGCCAGTaGCTTTCAGGAGGACCACAT +
Preference number: 4 (lower is better)
Translates to: ISEPRLPITSCGLLYCWPIISSQ*LSGGPH
Trigger: ATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAAT...TGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCAGGCTGGGTGATTATTTaGGCCTCCTCTCATTTCCCC +
Preference number: 4 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPGWVII*ASSHFP
Trigger: GGGGAAATGAGAGGAGGCTCAAATAATCACCCAGCC...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TTGGGACAATTATGTGGGATCCTTAAGCAAATACCCAAATGGAATCTTAGACCTGAAGCCAGAGAGGGGTaGGCAGAAACACGAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LGQLCGILKQIPKWNLRPEAREG*AETREF
Trigger: AAACTCTCGTGTTTCTGCTCACCCCTCTCTGGCTTC...AGGTCTAAGATTCCATTTGGGTATTTGCTTAAGGATCCCACATAATTGTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAAGGCTGCAGTGAGCTATaGTCACAGAGCTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKGCSEL*SQSCTP
Trigger: TGGAGTGCAGCTCTGTGATCATAGCTCACTGCAGCC...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460034.5
ENST00000467167.5
CDS-3UTR GCA 90 bp AATGCGGTGATTACAAATTACTCAATATTTCCTAAAGACCATGAGAACTCCAGACAATGGCCCCAAAGCTaGACGAGCGACCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: NAVITNYSIFPKDHENSRQWPQS*TSDRHC
Trigger: ACAATGGCGGTCGCTCGTGCAGCTTTGGGGCCATTG...TCTGGAGTTCTCATGGTCTTTAGGAAATATTGAGTAATTTGTAATCACCGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TTCACATTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCACAATGGCCCCAAAGCTaGACGAGCGACCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: FTLYLKNVSEALKHQVYSQWPQS*TSDRHC
Trigger: ACAATGGCGGTCGCTCGTGCAGCTTTGGGGCCATTG...TGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAATGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCTGCAACTTGTCCTTaGCTCCCTGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIAPATCP*LPALCP
Trigger: TGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGG...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAACCTGCAACTTGTCCTTaGCTCCCTGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKPATCP*LPALCP
Trigger: TGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGG...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTGCTGAGTTCTTTGGGTaGTTCCTTTATAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: EALKHQVYSNTLPKQLFCAEFFG*FLYRKG
Trigger: CCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGC...ACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTTTGGTCTCCTTCTTTTaGATAAGCCTGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIILVSFF*ISLRSF
Trigger: GAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAA...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TTGGATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTAGCCATTCTAACCGCTaGTCTAGTGTAGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LDYFQPVTFRRTTYLQCLSHSNR*SSVVPS
Trigger: ACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT...AAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTGAAATTCTGGTTTCATaGTTACTCGGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIIEILVS*LLGSQK
Trigger: TTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTC...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp AGACACAGATTGGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTTTTTCTGTACATCTCTaGTGCTTCCAGACGATCAGC +
Preference number: 4 (lower is better)
Translates to: RHRLVSFFCISLRSFDATFSVHL*CFQTIS
Trigger: GCTGATCGTCTGGAAGCAGCAGAGATGTACAGAAAA...AGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAATCTGTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGGCCAACTCCCTTCCTaGTCCTTCTGTGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: SSLQIIKKFRWTWWCMPIGQLPS*SFCGHF
Trigger: GAAGTGGCCACAGAAGGAGCAGGAAGGGAGTTGGCC...TATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp CTGAAGAACAGCGCTTGTATAGCCCAAGTTCTTCTCTGCCTGAATCAACTTGTCGGAAAACAAAGGGATTaGAGGGTAACTCATACAAGG +
Preference number: 4 (lower is better)
Translates to: LKNSACIAQVLLCLNQLVGKQRD*RVTHTR
Trigger: CCTTGTATGAGTTACCCTGCAATCCCTTTGTTTTCC...GACAAGTTGATTCAGGCAGAGAAGAACTTGGGCTATACAAGCGCTGTTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp TCCAAAACACTAGATCCACTGGTGACAACATCTTCAATGATTAAACAGGTTTCTTTCGATGCAACTGGGTaGATCCTGGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SKTLDPLVTTSSMIKQVSFDATG*ILGSSA
Trigger: TGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAA...AGAAACCTGTTTAATCATTGAAGATGTTGTCACCAGTGGATCTAGTGTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CCA 90 bp ACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TPSLLKYASQAAFLYISAANNFL*AIVLLA
Trigger: GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGC...AGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp AGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCCTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: SLLKYASQAAFLYISAASLTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...GGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR CAA 72 bp TCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTaGGCCAAGATTATCTCCTCCTGCTTCCAACTGAAC +
Preference number: 4 (lower is better)
Translates to: SFANNFLWAIVL*AKIISSCFQLN
Trigger: GTTCAGTTGGAAGCAGGAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
3UTR CAA 72 bp ATGCCACGACCTACAATGATGATATCGGAACCTCGTTaGCCAATAACTTCTTGTGGGCTATTGTACTGTTGG +
Preference number: 4 (lower is better)
Translates to: MPRPTMMISEPR*PITSCGLLYCW
Trigger: CCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR CAA 72 bp TCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATaGTACTGTTGGCCAAGATTATCTCCTTCATACTGC +
Preference number: 4 (lower is better)
Translates to: SEPRLPITSCGL*YCWPRLSPSYC
Trigger: GCAGTATGAAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497791.5
CDS-3UTR TCA 90 bp TTGGGACAATTATGTGGGATCCTTAAGCAAATACCCAAATGGAATCTTAGACCTACACGGTGTCAAAACTaGTGCCTGCATTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LGQLCGILKQIPKWNLRPTRCQN*CLHFGQ
Trigger: CTGCCCAAAATGCAGGCATCAGTTTTGACACCGTGT...AGGTCTAAGATTCCATTTGGGTATTTGCTTAAGGATCCCACATAATTGTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp AGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACACTCCTGGAGTCAAGTaGAGAAATTCTGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: STQTPSLLKYASQAAFLYTPGVK*RNSGFM
Trigger: CATGAAACCAGAATTTCTTCACTTGACTCCAGGAGT...GTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp TTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCAAATACGCCTGCAACTTGTCCTTaGCTCCCTGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LYLKNVSEALKHQVYSNTPATCP*LPALCP
Trigger: TGGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGG...CGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp AAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTAGCTGAGTTCTTTGGGTaGTTCCTTTATAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: KHSNTKSTQIRFPSSFSVAEFFG*FLYRKG
Trigger: CCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGC...TACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp AAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGGCTGAGTTCTTTGGGTaGTTCCTTTATAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: KHQVYSNTLPKQLFCTSLAEFFG*FLYRKG
Trigger: CCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGC...CAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TTCACATTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCACCTGAGAAGCTTCGATaGAACTGGGTGGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: FTLYLKNVSEALKHQVYSPEKLR*NWVDPG
Trigger: CCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGG...TGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAATGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGGTTTTGGTCTCCTTCTTTTaGATAAGCCTGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: YLLLLPTELLESSEEILVLVSFF*ISLRSF
Trigger: GAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAA...AACCAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp CCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTGAACTCATGGCATTTTaGCAGAGTTATCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: PSLLKYASQAAFLYISAAELMAF*QSYQLL
Trigger: AAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC...AGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp AGATTGGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTGGTGTGTTTCCTATATCTaGAAACTTCCGGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: RLVSFFCISLRSFDATGWCVSYI*KLPVFK
Trigger: TTTGAAGACCGGAAGTTTGCAGATATAGGAAACACA...CCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR GCA 90 bp ACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTACAACAAATTCAGAGTaGTCCTCAGCCATTCTAACC +
Preference number: 4 (lower is better)
Translates to: TPSLLKYASQAAFLYISATTNSE*SSAILT
Trigger: GGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGT...AGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp AGACACAGATTGGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGAAATTCTGGTTTCATaGTTACTCGGGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RHRLVSFFCISLRSFDATEILVS*LLGSQK
Trigger: TTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTC...AGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAATCTGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
CDS-3UTR GCA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTAAAGATTATCTCCTCCTaGTTCCAACTGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLKIISS*FQLNSW
Trigger: CCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTT...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp TCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAAATCATCTGTACATCTCTGCTaGTTCCAGACGATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SWHFARVINSFITSRVKSSVHLC*FQTISC
Trigger: GCAGCTGATCGTCTGGAAGCAGCAGAGATGTACAGA...TGATTTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CAAGATTATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTTTTTCTGTACATCTCTaGTGCTTCCAGACGATCAGC +
Preference number: 4 (lower is better)
Translates to: QDYLLLLPTELLESSEEIFSVHL*CFQTIS
Trigger: GCTGATCGTCTGGAAGCAGCAGAGATGTACAGAAAA...AATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp AATGCGGTGATTACAAATTACTCAATATTTCCTAAAGACCATGAGAACTCCAGACAGAGAGGCAGAAGTTaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: NAVITNYSIFPKDHENSRQRGRS*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCAACTTCTGCCTCTCTG...TCTGGAGTTCTCATGGTCTTTAGGAAATATTGAGTAATTTGTAATCACCGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACTCACAGACATTCTGTaGACCCCATGGAGACATGGG +
Preference number: 4 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIALTDIL*TPWRHG
Trigger: CCCATGTCTCCATGGGGTGCACAGAATGTCTGTGAG...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp ACCAACAACAAATTCAGAGTGCTCCTCAGCCATTCTAACCGCTGCTCTAGTGTAGAATCTCCAGCATTTTaGACAATGTACACACTGAGT +
Preference number: 4 (lower is better)
Translates to: TNNKFRVLLSHSNRCSSVESPAF*TMYTLS
Trigger: ACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTC...TACACTAGAGCAGCGGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR CCA 90 bp TCCAAAACACTAGATCCACTGGTGACAACATCTTCAATGATTAAACAGGTTTCTGCTGCAACAGCTCTCTaGCCAGTGAAACATCAGCAG +
Preference number: 4 (lower is better)
Translates to: SKTLDPLVTTSSMIKQVSAATAL*PVKHQQ
Trigger: CTGCTGATGTTTCACTGGCCAGAGAGCTGTTGCAGC...AGAAACCTGTTTAATCATTGAAGATGTTGTCACCAGTGGATCTAGTGTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GCAACAGCTCTCTGGCCAGTGAAACATCAGCAGATAGACACAGATTGGTCTCCTAATATCAAGAACTCATaGCATTTTGCCAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: ATALWPVKHQQIDTDWSPNIKNS*HFARVI
Trigger: GATAACTCTGGCAAAATGCCATGAGTTCTTGATATT...AGGAGACCAATCTGTGTCTATCTGCTGATGTTTCACTGGCCAGAGAGCTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CCA 90 bp ATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGCAAGTGAAGAAATTCTaGTTTCATGCTTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: IGTSFANNFLWAIVLLAKQVKKF*FHAYSG
Trigger: TCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTG...CTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCTTCCAACTGAACTCCTaGAGTCAAGTGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: DIGTSFANNFLWAIVLLAFQLNS*SQVKKF
Trigger: GAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAA...GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTAGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLANNFL*AIVLLA
Trigger: GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGC...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp ACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTCTTACACAGGCCCTGTaGAAGAATCCAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TYNDDIGTSFANNFLWAILTQAL*KNPSRN
Trigger: ATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAG...AATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTAAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACA +
Preference number: 4 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLKDPQM*KTLTQT
Trigger: TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTT...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp ATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCACTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: ISEPRLPITSCGLLYCWPLTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...TGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp ATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAGGGCTATTGTACTGTTaGCCAAGATTATCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ISEPRLPITSCGLLYCWPGLLYC*PRLSPS
Trigger: TGAAGGAGATAATCTTGGCCAACAGTACAATAGCCC...TGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497791.5
CDS-3UTR TCA 90 bp AGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACACAAAGACATTCTCCTaGATAAACCTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: STQTPSLLKYASQAAFLYTKTFS*INLFTL
Trigger: GAGAGTGAAGAGGTTTATTCAGGAGAATGTCTTTGT...GTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp AGACACAGATTGGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTACAAAGACATTCTCCTaGATAAACCTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: RHRLVSFFCISLRSFDATTKTFS*INLFTL
Trigger: GAGAGTGAAGAGGTTTATTCAGGAGAATGTCTTTGT...AGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAATCTGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR TCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCAAGGGGAGAACCATTATaGTTCGCTGCCACAAAGACA +
Preference number: 4 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPRGEPL*FAATKT
Trigger: TGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCT...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTTTAGCAGGGGTCCTGTaGAATAGGGTTCATCAACAG +
Preference number: 4 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPLAGVL*NRVHQQ
Trigger: CTGTTGATGAACCCTATTTCACAGGACCCCTGCTAA...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TGCCCCTGCTCAAACACCACCTTGAATGTGGGCTTTCTCTTTATTATTAATGAACATGGTCATTTTCAATaGCTGACACTTGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: CPCSNTTLNVGFLFIINEHGHFQ*LTLGPL
Trigger: CAGTGGACCAAGTGTCAGTCATTGAAAATGACCATG...TTCATTAATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp TTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTATCTCCTCCTTTGGTCTCCTTCTTTTaGATAAGCCTGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPITSCGLLYCWPRLSPPLVSFF*ISLRSF
Trigger: GAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAA...AGGAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp AACAACAAATTCAGAGTGCTCCTCAGCCATTCTAACCGCTGCTCTAGTGTAGTCTGTGTTTCCTATATCTaGAAACTTCCGGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NNKFRVLLSHSNRCSSVVCVSYI*KLPVFK
Trigger: TTTGAAGACCGGAAGTTTGCAGATATAGGAAACACA...GACTACACTAGAGCAGCGGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCTGTGTTTCCTATATCTaGAAACTTCCGGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: DIGTSFANNFLWAIVLLACVSYI*KLPVFK
Trigger: TTTGAAGACCGGAAGTTTGCAGATATAGGAAACACA...GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAAAGCCATTCTAACCGCTaGTCTAGTGTAGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKSHSNR*SSVVPS
Trigger: ACTGGGGACTACACTAGAGCAGCGGTTAGAATGGCT...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACACAACAAATTCAGAGTaGTCCTCAGCCATTCTAACC +
Preference number: 4 (lower is better)
Translates to: DYFQPVTFRRTTYLQCLHTTNSE*SSAILT
Trigger: GGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGT...GTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp GAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAAAAGATTATCTCCTCCTaGTTCCAACTGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: ELMAFCQSYQLLHHIQSKKIISS*FQLNSW
Trigger: CCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTT...TTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
CDS-3UTR GCA 90 bp TTGGGACAATTATGTGGGATCCTTAAGCAAATACCCAAATGGAATCTTAGACCTTGCTCTACTTTCTCTTaGTCTTCAGAAGCCATGGGC +
Preference number: 4 (lower is better)
Translates to: LGQLCGILKQIPKWNLRPCSTFS*SSEAMG
Trigger: GCCCATGGCTTCTGAAGAGCAAGAGAAAGTAGAGCA...AGGTCTAAGATTCCATTTGGGTATTTGCTTAAGGATCCCACATAATTGTCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR GCA 90 bp TTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCAAATACGGCCATTGTCGCGCGCTaGCTGTTTGCTTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: LYLKNVSEALKHQVYSNTAIVAR*LFASNS
Trigger: GGAATTTGAAGCAAACAGGCAGCGCGCGACAATGGC...CGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462091.5
CDS-3UTR CCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTCTGATGCCTGCATTTTaGGCAGTTTGGAATAAAATA +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIILMPAF*AVWNKI
Trigger: TATTTTATTCCAAACTGCCCAAAATGCAGGCATCAG...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232607.7
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp TCTGAAGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCGAATCTCCAGCATTTTaGACAATGTACACACTGAGT +
Preference number: 4 (lower is better)
Translates to: SEALKHQVYSNTLPKQLFESPAF*TMYTLS
Trigger: ACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTC...GAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp ACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTCAAGTGAAGAAATTCTaGTTTCATGCTTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: TPSLLKYASQAAFLYISAQVKKF*FHAYSG
Trigger: TCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTG...AGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp ACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTCAAGTGAAGAAATTCTaGTTTCATGCTTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: TTYNDDIGTSFANNFLWAQVKKF*FHAYSG
Trigger: TCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTG...AGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp ACACTAGATCCACTGGTGACAACATCTTCAATGATTAAACAGGTTTCTCCTGGAGGGCTATTGTACTGTTaGCCAAGATTATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TLDPLVTTSSMIKQVSPGGLLYC*PRLSPP
Trigger: AGGAGGAGATAATCTTGGCCAACAGTACAATAGCCC...TCCAGGAGAAACCTGTTTAATCATTGAAGATGTTGTCACCAGTGGATCTAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
CDS-3UTR CCA 90 bp TGGAGTCAAGTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAAGGGCTATTGTACTGTTaGCCAAGATTATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WSQVKKFWFHAYSGARNKGLLYC*PRLSPP
Trigger: AGGAGGAGATAATCTTGGCCAACAGTACAATAGCCC...TTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTGACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp TGCCCCTGCTCAAACACCACCTTGAATGTGGGCTTTCTCTTTATTATTAATGAAGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CPCSNTTLNVGFLFIINEANNFL*AIVLLA
Trigger: GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGC...TTCATTAATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp AGATACCTCCTTCATACTGCTTTTTCACTGTGTTTCCTATATCTGCAAACTTCCCTTACACAGGCCCTGTaGAAGAATCCAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: RYLLHTAFSLCFLYLQTSLTQAL*KNPSRN
Trigger: ATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAG...GGAAGTTTGCAGATATAGGAAACACAGTGAAAAAGCAGTATGAAGGAGGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
CDS-3UTR CCA 90 bp TTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTATCTCCTCCTCTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: LPITSCGLLYCWPRLSPPLTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...AGGAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTACTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLLTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
3UTR CAA 72 bp AATGATGATATCGGAACCTCGTTTGCCAATAACTTCTaGTGGGCTATTGTACTGTTGGCCAAGATTATCTCC +
Preference number: 4 (lower is better)
Translates to: NDDIGTSFANNF*WAIVLLAKIIS
Trigger: GGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TATGCCACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGACAAAGACATTCTCCTaGATAAACCTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: YATTYNDDIGTSFANNFLTKTFS*INLFTL
Trigger: GAGAGTGAAGAGGTTTATTCAGGAGAATGTCTTTGT...CAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCAAGGGGAGAACCATTATaGTTCGCTGCCACAAAGACA +
Preference number: 4 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIARGEPL*FAATKT
Trigger: TGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCT...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp GAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAAACTCCTGGAGTCAAGTaGAGAAATTCTGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: ELMAFCQSYQLLHHIQSKTPGVK*RNSGFM
Trigger: CATGAAACCAGAATTTCTTCACTTGACTCCAGGAGT...TTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
CDS-3UTR TCA 90 bp GTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAAACCAACAACACTCCTGGAGTCAAGTaGAGAAATTCTGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: VKKFWFHAYSGARNKTNNTPGVK*RNSGFM
Trigger: CATGAAACCAGAATTTCTTCACTTGACTCCAGGAGT...GTTGTTGGTTTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAAAAGCATCTGCTAGCTaGAACAGCTCTCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSLQIIKKFRWTWWCMPIKASAS*NSSLAS
Trigger: ACTGGCCAGAGAGCTGTTGCAGCTAGCAGATGCTTT...TATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAAACAACAAATTCAGAGTaGTCCTCAGCCATTCTAACC +
Preference number: 4 (lower is better)
Translates to: ELMAFCQSYQLLHHIQSKTTNSE*SSAILT
Trigger: GGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGT...TTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
CDS-3UTR GCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCATTTTCTGTACATCTCTaGTGCTTCCAGACGATCAGC +
Preference number: 4 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPFSVHL*CFQTIS
Trigger: GCTGATCGTCTGGAAGCAGCAGAGATGTACAGAAAA...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TATGCCACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGGAATCTCCAGCATTTTaGACAATGTACACACTGAGT +
Preference number: 4 (lower is better)
Translates to: YATTYNDDIGTSFANNFLESPAF*TMYTLS
Trigger: ACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTC...CAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTGAATCTCCAGCATTTTaGACAATGTACACACTGAGT +
Preference number: 4 (lower is better)
Translates to: LKHQVYSNTLPKQLFCTSESPAF*TMYTLS
Trigger: ACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTC...AGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTAATATCAAGAACTCATaGCATTTTGCCAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIINIKNS*HFARVI
Trigger: GATAACTCTGGCAAAATGCCATGAGTTCTTGATATT...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp ATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGTTCCAACTGAACTCCTaGAGTCAAGTGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: MISEPRLPITSCGLLYCWFQLNS*SQVKKF
Trigger: GAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAA...CCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp TATGCCACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTTCCAACTGAACTCCTaGAGTCAAGTGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: YATTYNDDIGTSFANNFLFQLNS*SQVKKF
Trigger: GAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAA...CAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp TCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAAATCAGGGCTATTGTACTGTTaGCCAAGATTATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SWHFARVINSFITSRVKSGLLYC*PRLSPP
Trigger: AGGAGGAGATAATCTTGGCCAACAGTACAATAGCCC...TGATTTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
CDS-3UTR CCA 90 bp TCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAAATCAGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SWHFARVINSFITSRVKSANNFL*AIVLLA
Trigger: GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGC...TGATTTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TCCAAAACACTAGATCCACTGGTGACAACATCTTCAATGATTAAACAGGTTTCTCTTACACAGGCCCTGTaGAAGAATCCAAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SKTLDPLVTTSSMIKQVSLTQAL*KNPSRN
Trigger: ATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAG...AGAAACCTGTTTAATCATTGAAGATGTTGTCACCAGTGGATCTAGTGTTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CCA 90 bp AGATACCTCCTTCATACTGCTTTTTCACTGTGTTTCCTATATCTGCAAACTTCCAAGGATCCTCAAATGTaGAAGACCCTAACCCAGACA +
Preference number: 4 (lower is better)
Translates to: RYLLHTAFSLCFLYLQTSKDPQM*KTLTQT
Trigger: TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTT...GGAAGTTTGCAGATATAGGAAACACAGTGAAAAAGCAGTATGAAGGAGGTATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
CDS-3UTR CCA 90 bp TCAAGAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: SRTHGILPELSTPSSHPEIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...CTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
CDS-3UTR CCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCACTTTTAGGCCAGAGATaGAGGGGAATGGCTAACAAT +
Preference number: 4 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPLLGQR*RGMANN
Trigger: ATTGTTAGCCATTCCCCTCCATCTCTGGCCTAAAAG...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCATTCTTCCTTGAGAGTTaGTCTCTCCCACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIAFFLES*SLPQTA
Trigger: TGCTGTCTGTGGGAGAGACCAACTCTCAAGGAAGAA...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCACCTTTGGAAGGGTTATaGGGAAAACAAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPPLEGL*GKQRDC
Trigger: GCAATCCCTTTGTTTTCCCCATAACCCTTCCAAAGG...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TTCACATTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCATTCAAGCCCTCCTTCTaGAGAACCTCAACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: FTLYLKNVSEALKHQVYSFKPSF*RTSTVS
Trigger: GGAAACTGTTGAGGTTCTTCAGAAGGAGGGCTTGAA...TGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAATGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp ACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTACAAAGACATTCTCCTaGATAAACCTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: TYNDDIGTSFANNFLWAITKTFS*INLFTL
Trigger: GAGAGTGAAGAGGTTTATTCAGGAGAATGTCTTTGT...AATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAAAGTCAAGGTTGCAGTaGGCCATGATATACTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSLQIIKKFRWTWWCMPIKSRLQ*AMIYSS
Trigger: GCTGGAGTATATCATGGCTCACTGCAACCTTGACTT...TATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR TCA 90 bp TTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTATCTCCTCCTTTTAAGCTGGATTTCTaGTTCTTGCAGATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LPITSCGLLYCWPRLSPPFKLDF*FLQIPE
Trigger: TTCAGGAATCTGCAAGAATCAGAAATCCAGCTTAAA...AGGAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479719.5
CDS-3UTR GCA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTGTCAAAACTGATGCCTaGATTTTGGGCAGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPVKTDA*ILGSLE
Trigger: TTCCAAACTGCCCAAAATGCAGGCATCAGTTTTGAC...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232607.7
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp ACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGAACTCATGGCATTTTaGCAGAGTTATCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: TYNDDIGTSFANNFLWAIELMAF*QSYQLL
Trigger: AAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC...AATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp GAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAAGAACTCATGGCATTTTaGCAGAGTTATCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: ELMAFCQSYQLLHHIQSKELMAF*QSYQLL
Trigger: AAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC...TTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
CDS-3UTR GCA 90 bp CTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACCAACAACAAATTCAGAGTaGTCCTCAGCCATTCTAACC +
Preference number: 4 (lower is better)
Translates to: LQIIKKFRWTWWCMPIAPTTNSE*SSAILT
Trigger: GGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGT...TGGTGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTACAACAAATTCAGAGTaGTCCTCAGCCATTCTAACC +
Preference number: 4 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPTTNSE*SSAILT
Trigger: GGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGT...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp TCTTTGTATTTCTATTGCGGCCTTCCTTTGGAAGGGTTATGGGGAAAACAAAGGCTGATGCCTGCATTTTaGGCAGTTTGGAATAAAATA +
Preference number: 4 (lower is better)
Translates to: SLYFYCGLPLEGLWGKQRLMPAF*AVWNKI
Trigger: TATTTTATTCCAAACTGCCCAAAATGCAGGCATCAG...CCTTTGTTTTCCCCATAACCCTTCCAAAGGAAGGCCGCAATAGAAATACAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp TCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCCTGATGCCTGCATTTTaGGCAGTTTGGAATAAAATA +
Preference number: 4 (lower is better)
Translates to: SNTKSTQIRFPSSFSVHLLMPAF*AVWNKI
Trigger: TATTTTATTCCAAACTGCCCAAAATGCAGGCATCAG...GAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GATTATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGAATATCAAGAACTCATaGCATTTTGCCAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: DYLLLLPTELLESSEEILNIKNS*HFARVI
Trigger: GATAACTCTGGCAAAATGCCATGAGTTCTTGATATT...CAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp ATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAATATCAAGAACTCATaGCATTTTGCCAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: ISEPRLPITSCGLLYCWPNIKNS*HFARVI
Trigger: GATAACTCTGGCAAAATGCCATGAGTTCTTGATATT...TGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp AATGCGGTGATTACAAATTACTCAATATTTCCTAAAGACCATGAGAACTCCAGACACCCTGGAACTCCATaGCATGCACTACTAAGCATT +
Preference number: 4 (lower is better)
Translates to: NAVITNYSIFPKDHENSRHPGTP*HALLSI
Trigger: AATGCTTAGTAGTGCATGCCATGGAGTTCCAGGGTG...TCTGGAGTTCTCATGGTCTTTAGGAAATATTGAGTAATTTGTAATCACCGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
3UTR CAA 72 bp TCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTaGGCCAAGATTATCTCCTTCATACTGCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: SFANNFLWAIVL*AKIISFILLFH
Trigger: GTGAAAAAGCAGTATGAAGGAGATAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497791.5
CDS-3UTR TCA 90 bp GTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAAACCAACAACTTTAAAGATACCTCCTaGGAAAGAAGTCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: VKKFWFHAYSGARNKTNNFKDTS*ERSQQR
Trigger: TCTCTGTTGACTTCTTTCTCAGGAGGTATCTTTAAA...GTTGTTGGTTTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479719.5
CDS-3UTR GCA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAAGTCAAAACTGATGCCTaGATTTTGGGCAGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKVKTDA*ILGSLE
Trigger: TTCCAAACTGCCCAAAATGCAGGCATCAGTTTTGAC...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000232607.7
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCATTGGTCTCCTTCTTTTaGATAAGCCTGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIALVSFF*ISLRSF
Trigger: GAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAA...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTGAACTCATGGCATTTTaGCAGAGTTATCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPELMAF*QSYQLL
Trigger: AAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp AGAAAGGGGAGAACCATTATGATTCGCTGCCACAAAGACATTCTCCTGAATAAATGTGTTTCCTATATCTaGAAACTTCCGGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: RKGRTIMIRCHKDILLNKCVSYI*KLPVFK
Trigger: TTTGAAGACCGGAAGTTTGCAGATATAGGAAACACA...TTTATTCAGGAGAATGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR GCA 90 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAAAGATTATCTCCTCCTaGTTCCAACTGAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSLQIIKKFRWTWWCMPIKIISS*FQLNSW
Trigger: CCAGGAGTTCAGTTGGAAGCAGGAGGAGATAATCTT...TATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR GCA 90 bp TTCACATTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCATTTTCTGTACATCTCTaGTGCTTCCAGACGATCAGC +
Preference number: 4 (lower is better)
Translates to: FTLYLKNVSEALKHQVYSFSVHL*CFQTIS
Trigger: GCTGATCGTCTGGAAGCAGCAGAGATGTACAGAAAA...TGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAATGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TCTTTGTATTTCTATTGCGGCCTTCCTTTGGAAGGGTTATGGGGAAAACAAAGGAATATCAAGAACTCATaGCATTTTGCCAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: SLYFYCGLPLEGLWGKQRNIKNS*HFARVI
Trigger: GATAACTCTGGCAAAATGCCATGAGTTCTTGATATT...CCTTTGTTTTCCCCATAACCCTTCCAAAGGAAGGCCGCAATAGAAATACAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp AAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGAATATCAAGAACTCATaGCATTTTGCCAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: KHQVYSNTLPKQLFCTSLNIKNS*HFARVI
Trigger: GATAACTCTGGCAAAATGCCATGAGTTCTTGATATT...CAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp AATGCGGTGATTACAAATTACTCAATATTTCCTAAAGACCATGAGAACTCCAGAGGGCTATTGTACTGTTaGCCAAGATTATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NAVITNYSIFPKDHENSRGLLYC*PRLSPP
Trigger: AGGAGGAGATAATCTTGGCCAACAGTACAATAGCCC...TCTGGAGTTCTCATGGTCTTTAGGAAATATTGAGTAATTTGTAATCACCGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp TTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCAAATACGGGGCTATTGTACTGTTaGCCAAGATTATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LYLKNVSEALKHQVYSNTGLLYC*PRLSPP
Trigger: AGGAGGAGATAATCTTGGCCAACAGTACAATAGCCC...CGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCCAATAACTTCTTGTaGGCTATTGTACTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSLQIIKKFRWTWWCMPIANNFL*AIVLLA
Trigger: GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGC...TATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCAACAAAGACATTCTCCTaGATAAACCTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIATKTFS*INLFTL
Trigger: GAGAGTGAAGAGGTTTATTCAGGAGAATGTCTTTGT...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR TCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCAAATGTGAATAACCAGTaGAGTGGTTCTCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIANVNNQ*SGSQSP
Trigger: TGGACTTTGAGAACCACTTCACTGGTTATTCACATT...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCAGAATCTCCAGCATTTTaGACAATGTACACACTGAGT +
Preference number: 4 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIAESPAF*TMYTLS
Trigger: ACTCAGTGTGTACATTGTCCAAAATGCTGGAGATTC...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAACAAGTGAAGAAATTCTaGTTTCATGCTTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKQVKKF*FHAYSG
Trigger: TCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTG...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAATTCCAACTGAACTCCTaGAGTCAAGTGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKFQLNS*SQVKKF
Trigger: GAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAA...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp TTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCAAATACGCTGACTTTAGCCTCTTaGTGCCCTAGAATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: LYLKNVSEALKHQVYSNTLTLAS*CPRIFV
Trigger: GACAAAAATTCTAGGGCACCAAGAGGCTAAAGTCAG...CGTATTTGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR GCA 90 bp AATGCGGTGATTACAAATTACTCAATATTTCCTAAAGACCATGAGAACTCCAGAGAACTCATGGCATTTTaGCAGAGTTATCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: NAVITNYSIFPKDHENSRELMAF*QSYQLL
Trigger: AAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC...TCTGGAGTTCTCATGGTCTTTAGGAAATATTGAGTAATTTGTAATCACCGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCACTGATGCCTGCATTTTaGGCAGTTTGGAATAAAATA +
Preference number: 4 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIALMPAF*AVWNKI
Trigger: TATTTTATTCCAAACTGCCCAAAATGCAGGCATCAG...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232607.7
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp TTCACATTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCACAAGTGAAGAAATTCTaGTTTCATGCTTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: FTLYLKNVSEALKHQVYSQVKKF*FHAYSG
Trigger: TCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTG...TGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAATGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CCA 90 bp AATGCGGTGATTACAAATTACTCAATATTTCCTAAAGACCATGAGAACTCCAGAATAAAGAAATTTAGATaGACGTGGTGGTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: NAVITNYSIFPKDHENSRIKKFR*TWWCMP
Trigger: AGGCATGCACCACCACGTCCATCTAAATTTCTTTAT...TCTGGAGTTCTCATGGTCTTTAGGAAATATTGAGTAATTTGTAATCACCGCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CCA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAACACACACACAATCTATaGGCTTATGTTCTACAGAAT +
Preference number: 4 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKHTHNL*AYVLQN
Trigger: ATTCTGTAGAACATAAGCCCATAGATTGTGTGTGTG...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS CCA 90 bp GTCCCCAAACTTGAAAGCCTGCACGTCGTACAGACCCGTCACCAATaGCCCCAAAGCTGCACGAGCGACCGCCATTGTCGCGCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: VPKLESLHVVQTRHQ*PQSCTSDRHCRALP
Trigger: AGGCAGCGCGCGACAATGGCGGTCGCTCGTGCAGCTTTGGGGCCATTGGTGACGGGTCTGTACGACGTGCAGGCTTTCAAGTTTGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
ENST00000628619.1
CDS-3UTR CAA 90 bp GCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCCACGAGCGACCGCCATaGTCGCGCGCTGCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: AIRRHPRCKGRPTSCRPFHERPP*SRAACL
Trigger: CAAACAGGCAGCGCGCGACAATGGCGGTCGCTCGTG...GAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS GCA 90 bp GAAAGCCTGCACGTCGTACAGACCCGTCACCAATGGCCCCAAAGCTaGACGAGCGACCGCCATTGTCGCGCGCTGCCTGTTTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: ESLHVVQTRHQWPQS*TSDRHCRALPVCFK
Trigger: TTTGAAGCAAACAGGCAGCGCGCGACAATGGCGGTCGCTCGTGCAGCTTTGGGGCCATTGGTGACGGGTCTGTACGACGTGCAGGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462091.5
ENST00000467167.5
ENST00000628619.1
CDS-3UTR CAA 90 bp TGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTCATTTCCGCAATGCCTGCAACTTGTCCTaGCCTCCCTGCTCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: CSSVVPSGQGAGGAHFRNACNLS*PPCSLS
Trigger: GGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGC...ATTGCGGAAATGAGCTCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR CAA 90 bp CAGGGAGCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGAGGCAGGCCCACTTCTaGCAGGCCTTTCACAACTCC +
Preference number: 5 (lower is better)
Translates to: QGAGGAHFRNKEAPPMQRRQAHF*QAFHNS
Trigger: GGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCT...CCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp GACAAGGGTGGGGAAATGGCTGATCCTGTGCCACTTCCTGCAGGTGGGCCCCAATGCAGTGTTGGGACATaGGAGGCAGGACTATGGAGC +
Preference number: 5 (lower is better)
Translates to: DKGGEMADPVPLPAGGPQCSVGT*EAGLWS
Trigger: GCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCA...TTGGGGCCCACCTGCAGGAAGTGGCACAGGATCAGCCATTTCCCCACCCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS GCA 90 bp GAGGAAAGCCCGCTCTTCAGCACGAAGTCCCCAAACTTGAAAGCCTaGACGTCGTACAGACCCGTCACCAATGGCCCCAAAGCTGCACGA +
Preference number: 5 (lower is better)
Translates to: EESPLFSTKSPNLKA*TSYRPVTNGPKAAR
Trigger: TCGTGCAGCTTTGGGGCCATTGGTGACGGGTCTGTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCGTGCTGAAGAGCGGGCTTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
ENST00000628619.1
CDS-3UTR CAA 90 bp CTGCTCTCTGTCCAACAGCACTATGGCATCAGTGACCTTCAAGCCCTCCTTCTGCCGTGCGCCTGCAACTaGTCCTTGCCTCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LLSVQQHYGISDLQALLLPCACN*SLPPCS
Trigger: AGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGG...CAGAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS GCA 90 bp GTAAGAGAGATCCCATCTGACTCAGAAGACGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGATGGGGGAGGAAAGCCCGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: VREIPSDSEDAVETR*PADRCRWGRKARSS
Trigger: TGAAGAGCGGGCTTTCCTCCCCCATCTACATCGATCTGCGGGGCATCGTGTCTCGACCGCGTCTTCTGAGTCAGATGGGATCTCTCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000467167.5
ENST00000628619.1
CDS GCA 90 bp ACAAGACGCTTAGTTCCTGACTCAGAAGACGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGATGGGGGAGGAAAGCCCGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: TRRLVPDSEDAVETR*PADRCRWGRKARSS
Trigger: TGAAGAGCGGGCTTTCCTCCCCCATCTACATCGATCTGCGGGGCATCGTGTCTCGACCGCGTCTTCTGAGTCAGGAACTAAGCGTCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462091.5
ENST00000497791.5
CDS-3UTR CAA 90 bp CAGACAGCATTTCCCTGGAGATGCAGCACTGGGGACATGAAGCCCAAATTGGACGCCTGCAACTTGTCCTaGCCTCCCTGCTCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: QTAFPWRCSTGDMKPKLDACNLS*PPCSLS
Trigger: GGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGC...GTCCAATTTGGGCTTCATGTCCCCAGTGCTGCATCTCCAGGGAAATGCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGCCGTGCGCCTGCAACTaGTCCTTGCCTCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLPCACN*SLPPCS
Trigger: AGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGG...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp CACAGACCTCCTCTGCTGACAGTTCCCCACCCTTATTTTGGGTGTCAACTGCCCTGGGGCTTTCATACATaGGACGGGGGAGGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: HRPPLLTVPHPYFGCQLPWGFHT*DGGGWS
Trigger: ACTCCAGCCTCCCCCGTCCAATGTATGAAAGCCCCA...GGGCAGTTGACACCCAAAATAAGGGTGGGGAACTGTCAGCAGAGGAGGTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACACCGTGCGCCTGCAACTaGTCCTTGCCTCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTPCACN*SLPPCS
Trigger: AGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGG...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp CGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTCATTTCCGCGCAGATAGACACAGATaGGTCTCCTTCTTTTGCATA +
Preference number: 5 (lower is better)
Translates to: RCSSVVPSGQGAGGAHFRADRHR*VSFFCI
Trigger: TATGCAAAAGAAGGAGACCAATCTGTGTCTATCTGC...GCGGAAATGAGCTCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp GAGTGGAGGCGGATCCCGTGCGCCTGCAACTTGTCCTTGCCTCCCTGCTCTCTGAGAACTCATGGCATTTaGCCAGAGTTATCAACTCCT +
Preference number: 5 (lower is better)
Translates to: EWRRIPCACNLSLPPCSLRTHGI*PELSTP
Trigger: AGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCT...CAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGGGATCCGCCTCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GACAAGGGTGGGGAAATGGCTGATCCTGTGCCACTTCCTGCAGGTGGGCCCCAATGGGCTATTGTACTGTaGGCCAAGATTATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: DKGGEMADPVPLPAGGPQWAIVL*AKIISS
Trigger: GGAGGAGATAATCTTGGCCAACAGTACAATAGCCCA...TTGGGGCCCACCTGCAGGAAGTGGCACAGGATCAGCCATTTCCCCACCCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp GGCCACTTCTTCCTTGAGAGTTGGTCTCTCCCACAGACAGCATTTCCCTGGAGACCCACCTTCCCCTCTTaGGAGAGTGAGCAATGGCAG +
Preference number: 5 (lower is better)
Translates to: GHFFLESWSLPQTAFPWRPTFPS*ESEQWQ
Trigger: CTGCCATTGCTCACTCTCCAAAGAGGGGAAGGTGGG...TCTCCAGGGAAATGCTGTCTGTGGGAGAGACCAACTCTCAAGGAAGAAGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS GCA 90 bp AAGCCTGAGAAGCTTCGATGCAACTGGGTGGATCCTGGGCAGCTCTaGACGTGCACCGAAGCTGAGTTCTTTGGGTGCTTCCATAATCCT +
Preference number: 5 (lower is better)
Translates to: KPEKLRCNWVDPGQL*TCTEAEFFGCFHNP
Trigger: AGGATTATGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474588.5
CDS-3UTR CAA 90 bp GCAACAGCTCTCTGGCCAGTGAAACATCAGCAGATAGACACAGATTGGTCTCCTGCCTGCAACTTGTCCTaGCCTCCCTGCTCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: ATALWPVKHQQIDTDWSPACNLS*PPCSLS
Trigger: GGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGC...AGGAGACCAATCTGTGTCTATCTGCTGATGTTTCACTGGCCAGAGAGCTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGAGGCAGGCCCACTTCTaGCAGGCCTTTCACAACTCC +
Preference number: 5 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLRQAHF*QAFHNS
Trigger: GGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCT...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp CGCTGCTCTAGTGTAGTCCCCAGTGGCCAGGGAGCCGGTGGAGCTCATTTCCGCTTTGCCAATAACTTCTaGTGGGCTATTGTACTGTTG +
Preference number: 5 (lower is better)
Translates to: RCSSVVPSGQGAGGAHFRFANNF*WAIVLL
Trigger: CAACAGTACAATAGCCCACAAGAAGTTATTGGCAAA...GCGGAAATGAGCTCCACCGGCTCCCTGGCCACTGGGGACTACACTAGAGCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp TTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGAGACATGGGGGTGGCCACTTCTTCCTaGAGAGTTGGTCTCTCCCAC +
Preference number: 5 (lower is better)
Translates to: FSTPSVSQTFCAPHGDMGVATSS*RVGLSH
Trigger: GTGGGAGAGACCAACTCTCAAGGAAGAAGTGGCCAC...CCCCATGTCTCCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp GGCCACTTCTTCCTTGAGAGTTGGTCTCTCCCACAGACAGCATTTCCCTGGAGAGGAGACAATGCAGTGTaGGGACATTGGAGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GHFFLESWSLPQTAFPWRGDNAV*GHWRQD
Trigger: GTCCTGCCTCCAATGTCCCAACACTGCATTGTCTCC...TCTCCAGGGAAATGCTGTCTGTGGGAGAGACCAACTCTCAAGGAAGAAGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS GCA 90 bp ATAAAATATCTGCAACCTGACTCAGAAGACGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGATGGGGGAGGAAAGCCCGCTCTTCA +
Preference number: 5 (lower is better)
Translates to: IKYLQPDSEDAVETR*PADRCRWGRKARSS
Trigger: TGAAGAGCGGGCTTTCCTCCCCCATCTACATCGATCTGCGGGGCATCGTGTCTCGACCGCGTCTTCTGAGTCAGGTTGCAGATATTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232607.7
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp TCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGACCGTGCGCCTGCAACTaGTCCTTGCCTCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SEPRLPITSCGLLYCWPRPCACN*SLPPCS
Trigger: AGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGG...TCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp CAGGGAGCCGGTGGAGCTCATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGATTGGTCTCCTTCTTTaGCATAAGCCTGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: QGAGGAHFRNKEAPPMQRIGLLL*HKPEKL
Trigger: AAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAAT...CCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAAGGCAGGCCCACTTCTaGCAGGCCTTTCACAACTCC +
Preference number: 5 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTRQAHF*QAFHNS
Trigger: GGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCT...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp CATTTCCGCAATAAGGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGTGGGCTATTGTACTGTaGGCCAAGATTATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HFRNKEAPPMQRQAHFLQWAIVL*AKIISS
Trigger: GGAGGAGATAATCTTGGCCAACAGTACAATAGCCCA...CTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCGGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp GGAGGCACCCCCGATGCAAAGGCAGGCCCACTTCTTGCAGGCCTTTCACAACTCACTTCTTGTGGGCTATaGTACTGTTGGCCAAGATTA +
Preference number: 5 (lower is better)
Translates to: GGTPDAKAGPLLAGLSQLTSCGL*YCWPRL
Trigger: TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGT...GAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp GCAACTGGGTGGATCCTGGGCAGCTCTGCACGTGCACCGAAGCTGAGTTCTTTGATATCGGAACCTCGTTaGCCAATAACTTCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: ATGWILGSSARAPKLSSLISEPR*PITSCG
Trigger: CCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT...CAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GTGGATCCTGGGCAGCTCTGCACGTGCACCGAAGCTGAGTTCTTTGGGTGCTTCATATCGGAACCTCGTTaGCCAATAACTTCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: VDPGQLCTCTEAEFFGCFISEPR*PITSCG
Trigger: CCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT...GAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp ACTGACTGTCCTTACCTGACGATTGAGACTCTCAGGCCCACCAGGTCTGCTTCTGGGCTGGGTGATTATTaGAGCCTCCTCTCATTTCCC +
Preference number: 5 (lower is better)
Translates to: TDCPYLTIETLRPTRSASGLGDY*SLLSFP
Trigger: GGGAAATGAGAGGAGGCTCAAATAATCACCCAGCCC...AGAAGCAGACCTGGTGGGCCTGAGAGTCTCAATCGTCAGGTAAGGACAGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp TATGCCACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGCACGAGCGACCGCCATaGTCGCGCGCTGCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: YATTYNDDIGTSFANNFLHERPP*SRAACL
Trigger: CAAACAGGCAGCGCGCGACAATGGCGGTCGCTCGTG...CAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp ACCAACAACAAATTCAGAGTGCTCCTCAGCCATTCTAACCGCTGCTCTAGTGTAGCCTGCAACTTGTCCTaGCCTCCCTGCTCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: TNNKFRVLLSHSNRCSSVACNLS*PPCSLS
Trigger: GGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGC...TACACTAGAGCAGCGGTTAGAATGGCTGAGGAGCACTCTGAATTTGTTGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
CDS-3UTR CAA 90 bp GCAACTGGGTGGATCCTGGGCAGCTCTGCACGTGCACCGAAGCTGAGTTCTTTGAGAATCTCCAGCATTTaGGACAATGTACACACTGAG +
Preference number: 5 (lower is better)
Translates to: ATGWILGSSARAPKLSSLRISSI*DNVHTE
Trigger: CTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCT...CAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCACCCAGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GTGGATCCTGGGCAGCTCTGCACGTGCACCGAAGCTGAGTTCTTTGGGTGCTTCAGAACTCATGGCATTTaGCCAGAGTTATCAACTCCT +
Preference number: 5 (lower is better)
Translates to: VDPGQLCTCTEAEFFGCFRTHGI*PELSTP
Trigger: AGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCT...GAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCCCAGGATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp CCCTGCTCTCTGTCCAACAGCACTATGGCATCAGTGACCTTCAAGCCCTCCTTCTGGGCTATTGTACTGTaGGCCAAGATTATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PCSLSNSTMASVTFKPSFWAIVL*AKIISS
Trigger: GGAGGAGATAATCTTGGCCAACAGTACAATAGCCCA...GAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
CDS-3UTR CAA 90 bp TGGGCTTATGTTCTACAGAATGCCTCGAGTAGCTGGAGAGGCTGGGGGATGGCGTCACCTGGGACCTTTTaGGAAACGCAAATTCTCAAG +
Preference number: 5 (lower is better)
Translates to: WAYVLQNASSSWRGWGMASPGTF*ETQILK
Trigger: CTTGAGAATTTGCGTTTCCAAAAAGGTCCCAGGTGA...CGCCATCCCCCAGCCTCTCCAGCTACTCGAGGCATTCTGTAGAACATAAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp ATGCAGTGTTGGGACATTGGAGGCAGGACTATGGAGCTGTCTGTGCACAAGGGCGCTGAAGAACAGCGCTaGTATAGCCCAAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: MQCWDIGGRTMELSVHKGAEEQR*YSPSSS
Trigger: AGAAGAACTTGGGCTATACAAGCGCTGTTCTTCAGC...GCCCTTGTGCACAGACAGCTCCATAGTCCTGCCTCCAATGTCCCAACACTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp TTGGATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACGAGCGACCGCCATaGTCGCGCGCTGCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: LDYFQPVTFRRTTYLQCLHERPP*SRAACL
Trigger: CAAACAGGCAGCGCGCGACAATGGCGGTCGCTCGTG...AAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AGAACCTCAACAGTTTCCAAAACACTAGATCCACTGGTGACAACATCTTCAATGCACGAGCGACCGCCATaGTCGCGCGCTGCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: RTSTVSKTLDPLVTTSSMHERPP*SRAACL
Trigger: CAAACAGGCAGCGCGCGACAATGGCGGTCGCTCGTG...CATTGAAGATGTTGTCACCAGTGGATCTAGTGTTTTGGAAACTGTTGAGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGGGTGGATCCTACGAAGTCCCCAAACTaGAAAGCCTGCACGTCGTAC +
Preference number: 5 (lower is better)
Translates to: GLLLLHKPEKLRCNWVDPTKSPN*KACTSY
Trigger: GTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCGT...AGGATCCACCCAGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAACGAAGTCCCCAAACTaGAAAGCCTGCACGTCGTAC +
Preference number: 5 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTTKSPN*KACTSY
Trigger: GTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCGT...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AGACACAGATTGGTCTCCTTCTTTTGCATAAGCCTGAGAAGCTTCGATGCAACTGCCTGCAACTTGTCCTaGCCTCCCTGCTCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: RHRLVSFFCISLRSFDATACNLS*PPCSLS
Trigger: GGACAGAGAGCAGGGAGGCAAGGACAAGTTGCAGGC...AGTTGCATCGAAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAATCTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp CTGTCTGTGCACAAGGGCACCCCCGAAGACATGGTTGTCCTCATGAGAACCTTGCCGAAGCTGAGTTCTTaGGGTGCTTCCTTTATAGAA +
Preference number: 5 (lower is better)
Translates to: LSVHKGTPEDMVVLMRTLPKLSS*GASFIE
Trigger: TTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGG...CAAGGTTCTCATGAGGACAACCATGTCTTCGGGGGTGCCCTTGTGCACAGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp CCCTGCTCTCTGTCCAACAGCACTATGGCATCAGTGACCTTCAAGCCCTCCTTCTGGGCTATTGTACTGTaGGCCAAGATTATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PCSLSNSTMASVTFKPSFWAIVL*AKIISF
Trigger: GAAGGAGATAATCTTGGCCAACAGTACAATAGCCCA...GAAGGAGGGCTTGAAGGTCACTGATGCCATAGTGCTGTTGGACAGAGAGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497791.5
CDS-3UTR CAA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTCACGAGCGACCGCCATaGTCGCGCGCTGCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPHERPP*SRAACL
Trigger: CAAACAGGCAGCGCGCGACAATGGCGGTCGCTCGTG...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTAAACCGTGCGCCTGCAACTaGTCCTTGCCTCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ELMAFCQSYQLLHHIQSKPCACN*SLPPCS
Trigger: AGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGG...TTTACTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGGTTAGGCAGGCCCACTTCTaGCAGGCCTTTCACAACTCC +
Preference number: 5 (lower is better)
Translates to: YLLLLPTELLESSEEILVRQAHF*QAFHNS
Trigger: GGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCT...AACCAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp AGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAAGGACAGACTTCTTGTGGGCTATaGTACTGTTGGCCAAGATTA +
Preference number: 5 (lower is better)
Translates to: RNSACVLEMAGAHISKGQTSCGL*YCWPRL
Trigger: TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGT...CTGTCCTTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp GGCCACTTCTTCCTTGAGAGTTGGTCTCTCCCACAGACAGCATTTCCCTGGAGATGCTCAAACACCACCTaGAATGTGGGCTTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: GHFFLESWSLPQTAFPWRCSNTT*NVGFLF
Trigger: AAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCA...TCTCCAGGGAAATGCTGTCTGTGGGAGAGACCAACTCTCAAGGAAGAAGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp GTGACTCTTAGCAGGAGGCAGACCTCAAGGCTGTCTCACTGCAGAGGCAGAAATGGGAAAACAAAGGGATaGCAGGGTAACTCATACAAG +
Preference number: 5 (lower is better)
Translates to: VTLSRRQTSRLSHCRGRNGKTKG*QGNSYK
Trigger: CTTGTATGAGTTACCCTGCAATCCCTTTGTTTTCCC...ATTTCTGCCTCTGCAGTGAGACAGCCTTGAGGTCTGCCTCCTGCTAAGAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp ATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCCCACATTTCTAAATATTGCGGCCTTCCTTaGGAAGGGTTATGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: INRNSACVLEMAGAHISKYCGLP*EGLWGK
Trigger: TTTTCCCCATAACCCTTCCAAAGGAAGGCCGCAATA...TTTAGAAATGTGGGCTCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp CTGAAGAACAGCGCTTGTATAGCCCAAGTTCTTCTCTGCCTGAATCAACTTGTCGGAGCCCTCTGCCTCTaGTCTAGAGGAAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: LKNSACIAQVLLCLNQLVGALCL*SRGRLS
Trigger: GGAAAGTCTTCCTCTAGACAAGAGGCAGAGGGCTCC...GACAAGTTGATTCAGGCAGAGAAGAACTTGGGCTATACAAGCGCTGTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp GATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACGTCCTCATGAGAACCTaGGTTGTGCGGCCCGTCCAC +
Preference number: 5 (lower is better)
Translates to: DYFQPVTFRRTTYLQCLHVLMRT*VVRPVH
Trigger: GTGGACGGGCCGCACAACCAAGGTTCTCATGAGGAC...GTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTATCGCGCGCTGCCTGTTaGCTTCAAATTCCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLSRAAC*LQIPRR
Trigger: GCGCCTGGGAATTTGAAGCAAACAGGCAGCGCGCGA...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462091.5
CDS-3UTR CAA 90 bp CCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTACGAAGTCCCCAAACTaGAAAGCCTGCACGTCGTAC +
Preference number: 5 (lower is better)
Translates to: PSLLKYASQAAFLYISAATKSPN*KACTSY
Trigger: GTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCGT...AGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp ATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGACGAAGTCCCCAAACTaGAAAGCCTGCACGTCGTAC +
Preference number: 5 (lower is better)
Translates to: IGTSFANNFLWAIVLLAKTKSPN*KACTSY
Trigger: GTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCGT...CTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTCCGTGCGCCTGCAACTaGTCCTTGCCTCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPPCACN*SLPPCS
Trigger: AGAGCAGGGAGGCAAGGACAAGTTGCAGGCGCACGG...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TTCTCCACTCCATCAGTCTCACAGACATTCTGTGCACCCCATGGAGACATGGGGAGAACTCATGGCATTTaGCCAGAGTTATCAACTCCT +
Preference number: 5 (lower is better)
Translates to: FSTPSVSQTFCAPHGDMGRTHGI*PELSTP
Trigger: AGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCT...CCCCATGTCTCCATGGGGTGCACAGAATGTCTGTGAGACTGATGGAGTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp AAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGAGGCAGGCCCACTTCTaGCAGGCCTTTCACAACTCC +
Preference number: 5 (lower is better)
Translates to: KHQVYSNTLPKQLFCTSLRQAHF*QAFHNS
Trigger: GGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCT...CAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp GCAACAGCTCTCTGGCCAGTGAAACATCAGCAGATAGACACAGATTGGTCTCCTTGGGCTATTGTACTGTaGGCCAAGATTATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ATALWPVKHQQIDTDWSPWAIVL*AKIISS
Trigger: GGAGGAGATAATCTTGGCCAACAGTACAATAGCCCA...AGGAGACCAATCTGTGTCTATCTGCTGATGTTTCACTGGCCAGAGAGCTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
CDS-3UTR CAA 90 bp TCACCCTGCCCCTGCTCAAACACCACCTTGAATGTGGGCTTTCTCTTTATTATTAGGCAGGAGAACTGCTaGAACCAGAGAGGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: SPCPCSNTTLNVGFLFIIRQENC*NQRGRS
Trigger: ACTTCTGCCTCTCTGGTTCAAGCAGTTCTCCTGCCT...AATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCAGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp ACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTACGAAGTCCCCAAACTaGAAAGCCTGCACGTCGTAC +
Preference number: 5 (lower is better)
Translates to: TTYNDDIGTSFANNFLWATKSPN*KACTSY
Trigger: GTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCGT...AGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp ATCTCTGCTGCTTCCAGACGATCAGCTGCTGAGATTATGCCACGACCTACAATGCCGAAGCTGAGTTCTTaGGGTGCTTCCTTTATAGAA +
Preference number: 5 (lower is better)
Translates to: ISAASRRSAAEIMPRPTMPKLSS*GASFIE
Trigger: TTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGG...CATTGTAGGTCGTGGCATAATCTCAGCAGCTGATCGTCTGGAAGCAGCAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TGTGAAATAGGGTTCATCAACAGGAACAGTGCCTGCGTCCTGGAGATGGCAGGAGCAGATAGACACAGATaGGTCTCCTTCTTTTGCATA +
Preference number: 5 (lower is better)
Translates to: CEIGFINRNSACVLEMAGADRHR*VSFFCI
Trigger: TATGCAAAAGAAGGAGACCAATCTGTGTCTATCTGC...TCCTGCCATCTCCAGGACGCAGGCACTGTTCCTGTTGATGAACCCTATTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp CTTGCAGGCCTTTCACAACTCCTGAGCCTGGCACCACGTGAGCATTTACTAGATAGAACTCATGGCATTTaGCCAGAGTTATCAACTCCT +
Preference number: 5 (lower is better)
Translates to: LAGLSQLLSLAPREHLLDRTHGI*PELSTP
Trigger: AGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCT...ATCTAGTAAATGCTCACGTGGTGCCAGGCTCAGGAGTTGTGAAAGGCCTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp TGGAGTCAAGTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAAAGGCAGGCCCACTTCTaGCAGGCCTTTCACAACTCC +
Preference number: 5 (lower is better)
Translates to: WSQVKKFWFHAYSGARNKRQAHF*QAFHNS
Trigger: GGAGTTGTGAAAGGCCTGCAAGAAGTGGGCCTGCCT...TTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTGACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp GATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAGGACTGTGGCTGACTTCTTGTGGGCTATaGTACTGTTGGCCAAGATTA +
Preference number: 5 (lower is better)
Translates to: DRKDPQMWKTLTQTGLWLTSCGL*YCWPRL
Trigger: TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGT...CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TCTTTGTATTTCTATTGCGGCCTTCCTTTGGAAGGGTTATGGGGAAAACAAAGGACGAAGTCCCCAAACTaGAAAGCCTGCACGTCGTAC +
Preference number: 5 (lower is better)
Translates to: SLYFYCGLPLEGLWGKQRTKSPN*KACTSY
Trigger: GTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCGT...CCTTTGTTTTCCCCATAACCCTTCCAAAGGAAGGCCGCAATAGAAATACAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp GTCCCATGGAGAGATAGGAAGGATCCTCAAATGTGGAAGACCCTAACCCAGACAATTGGTCTCCTTCTTTaGCATAAGCCTGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: VPWRDRKDPQMWKTLTQTIGLLL*HKPEKL
Trigger: AAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAAT...TGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCCTATCTCTCCATGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp CCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTGGGCTATTGTACTGTaGGCCAAGATTATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PSLLKYASQAAFLYISAAWAIVL*AKIISS
Trigger: GGAGGAGATAATCTTGGCCAACAGTACAATAGCCCA...AGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp TGCCCCTGCTCAAACACCACCTTGAATGTGGGCTTTCTCTTTATTATTAATGAAAGTAGTTCCAGCTACTaGAGCGGATCGCTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: CPCSNTTLNVGFLFIINESSSSY*SGSLEP
Trigger: GGGCTCAAGCGATCCGCTCAAGTAGCTGGAACTACT...TTCATTAATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS GCA 90 bp GAAGCATTTTTGGAAGAGCCACGACCAGTGACCAGATTTACCTCCTaGTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: EAFLEEPRPVTRFTS*FQLNSWSQVKKFWF
Trigger: AAACCAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGTAAATCTGGTCACTGGTCGTGGCTCTTCCAAAAATGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487622.5
CDS-3UTR CAA 90 bp GCTTACCTCCCCTCTACTAATGACCGTTGGGACAATTATGTGGGATCCTTAAGCAGAATCTCCAGCATTTaGGACAATGTACACACTGAG +
Preference number: 5 (lower is better)
Translates to: AYLPSTNDRWDNYVGSLSRISSI*DNVHTE
Trigger: CTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCT...GCTTAAGGATCCCACATAATTGTCCCAACGGTCATTAGTAGAGGGGAGGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp CCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTCCGAAGCTGAGTTCTTaGGGTGCTTCCTTTATAGAA +
Preference number: 5 (lower is better)
Translates to: PSLLKYASQAAFLYISAAPKLSS*GASFIE
Trigger: TTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGG...AGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACTGGGCTATTGTACTGTaGGCCAAGATTATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: STQTPSLLKYASQAAFLYWAIVL*AKIISS
Trigger: GGAGGAGATAATCTTGGCCAACAGTACAATAGCCCA...GTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp TCTGCACGTGCACCGAAGCTGAGTTCTTTGGGTGCTTCCTTTATAGAAAGGGGATTTGCCAATAACTTCTaGTGGGCTATTGTACTGTTG +
Preference number: 5 (lower is better)
Translates to: SARAPKLSSLGASFIERGFANNF*WAIVLL
Trigger: CAACAGTACAATAGCCCACAAGAAGTTATTGGCAAA...TCCCCTTTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TCACCCTGCCCCTGCTCAAACACCACCTTGAATGTGGGCTTTCTCTTTATTATTGACATGAAGCCCAAATaGGACTTTAGAGCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: SPCPCSNTTLNVGFLFIIDMKPK*DFRAEA
Trigger: AGCTTCTGCTCTAAAGTCCAATTTGGGCTTCATGTC...AATAATAAAGAGAAAGCCCACATTCAAGGTGGTGTTTGAGCAGGGGCAGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp CAGCACATCACTCCAAAGGCCTCTCAACATATCACTCCAACACTGAAGACACCTTCAGAAACAGATCACTaGAGGCACCCATTAGAAATG +
Preference number: 5 (lower is better)
Translates to: QHITPKASQHITPTLKTPSETDH*RHPLEM
Trigger: CATTTCTAATGGGTGCCTCAAGTGATCTGTTTCTGA...AGGTGTCTTCAGTGTTGGAGTGATATGTTGAGAGGCCTTTGGAGTGATGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp CTCCAGAACCCATTCTTACACAGGCCCTGTGGAAGAATCCAAGCAGGAATAATTTTGTCCTCTAAAGCTTaGATGCCAGACTGGGATTCT +
Preference number: 5 (lower is better)
Translates to: LQNPFLHRPCGRIQAGIILSSKA*MPDWDS
Trigger: AGAATCCCAGTCTGGCATCAAAGCTTTAGAGGACAA...AATTATTCCTGCTTGGATTCTTCCACAGGGCCTGTGTAAGAATGGGTTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp TCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGAAGAATCTCCAGCATTTaGGACAATGTACACACTGAG +
Preference number: 5 (lower is better)
Translates to: SEPRLPITSCGLLYCWPRRISSI*DNVHTE
Trigger: CTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCT...TCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCATTGGTCTCCTTCTTTaGCATAAGCCTGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: DIGTSFANNFLWAIVLLAIGLLL*HKPEKL
Trigger: AAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAAT...GGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCGCAGATAGACACAGATaGGTCTCCTTCTTTTGCATA +
Preference number: 5 (lower is better)
Translates to: SLLKYASQAAFLYISAASADRHR*VSFFCI
Trigger: TATGCAAAAGAAGGAGACCAATCTGTGTCTATCTGC...GGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATATCGGAACCTCGTTaGCCAATAACTTCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: STQTPSLLKYASQAAFLYISEPR*PITSCG
Trigger: CCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT...GTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS CCA 90 bp CTTGAGCTCCTGGATCCAACCACGCTTGACAGCCTGCTCTATGAATaGACTTTCAATGACATGAGCATTTCCTTTTTCTTCTTCAGTTTA +
Preference number: 5 (lower is better)
Translates to: LELLDPTTLDSLLYE*TFNDMSISFFFFSL
Trigger: TAAACTGAAGAAGAAAAAGGAAATGCTCATGTCATTGAAAGTCCATTCATAGAGCAGGCTGTCAAGCGTGGTTGGATCCAGGAGCTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479719.5
CDS CCA 90 bp ACCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTaGTTTCATGCTTACTCGGGAGCCAGAAATAAAACCAACAACAAA +
Preference number: 5 (lower is better)
Translates to: TSCFQLNSWSQVKKF*FHAYSGARNKTNNK
Trigger: TTTGTTGTTGGTTTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487622.5
CDS-3UTR CAA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAAACGAAGTCCCCAAACTaGAAAGCCTGCACGTCGTAC +
Preference number: 5 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKTKSPN*KACTSY
Trigger: GTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCGT...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp ATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCGAAGCTGAGTTCTTaGGGTGCTTCCTTTATAGAA +
Preference number: 5 (lower is better)
Translates to: MISEPRLPITSCGLLYCWPKLSS*GASFIE
Trigger: TTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGG...CCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AGCACTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACGCAGATAGACACAGATaGGTCTCCTTCTTTTGCATA +
Preference number: 5 (lower is better)
Translates to: STQTPSLLKYASQAAFLYADRHR*VSFFCI
Trigger: TATGCAAAAGAAGGAGACCAATCTGTGTCTATCTGC...GTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCGCAGATAGACACAGATaGGTCTCCTTCTTTTGCATA +
Preference number: 5 (lower is better)
Translates to: NTKSTQIRFPSSFSVHLCADRHR*VSFFCI
Trigger: TATGCAAAAGAAGGAGACCAATCTGTGTCTATCTGC...GCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGCTGCTTCCTTTGCCAATAACTTCTaGTGGGCTATTGTACTGTTG +
Preference number: 5 (lower is better)
Translates to: SLLKYASQAAFLYISAASFANNF*WAIVLL
Trigger: CAACAGTACAATAGCCCACAAGAAGTTATTGGCAAA...GGAAGCAGCAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TATGCCACGACCTACAATGATGATATCGGAACCTCGTTTGCCAATAACTTCTTGATATCGGAACCTCGTTaGCCAATAACTTCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: YATTYNDDIGTSFANNFLISEPR*PITSCG
Trigger: CCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT...CAAGAAGTTATTGGCAAACGAGGTTCCGATATCATCATTGTAGGTCGTGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTAATATCGGAACCTCGTTaGCCAATAACTTCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLISEPR*PITSCG
Trigger: CCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCAGGGCTGGTACCTGTTTaGACAAGACTCCAGGTGACT +
Preference number: 5 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIAGLVPV*TRLQVT
Trigger: AGTCACCTGGAGTCTTGTCAAAACAGGTACCAGCCC...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp TCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATAGCATTCCCCACCCTTATTTaGGGTGTCAACTGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: SLQIIKKFRWTWWCMPIAFPTLI*GVNCPS
Trigger: GGAAGGGCAGTTGACACCCAAAATAAGGGTGGGGAA...TGCTATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp GATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACAGAATCTCCAGCATTTaGGACAATGTACACACTGAG +
Preference number: 5 (lower is better)
Translates to: DYFQPVTFRRTTYLQCLHRISSI*DNVHTE
Trigger: CTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCT...GTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCAAGATTAATTGGTCTCCTTCTTTaGCATAAGCCTGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: EPRLPITSCGLLYCWPRLIGLLL*HKPEKL
Trigger: AAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAAT...TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GATTATTTCCAGCCAGTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGGTCTCCTTCTTTaGCATAAGCCTGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: DYFQPVTFRRTTYLQCLHIGLLL*HKPEKL
Trigger: AAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAAT...GTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCACTGGCTGGAAATAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp CTCAAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTAGAACTCATGGCATTTaGCCAGAGTTATCAACTCCT +
Preference number: 5 (lower is better)
Translates to: LKHQVYSNTLPKQLFCTSRTHGI*PELSTP
Trigger: AGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCT...AGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AAACACCAAGTCTACTCAAATACGCTTCCCAAGCAGCTTTTCTGTACATCTCTGACTTCTTGTGGGCTATaGTACTGTTGGCCAAGATTA +
Preference number: 5 (lower is better)
Translates to: KHQVYSNTLPKQLFCTSLTSCGL*YCWPRL
Trigger: TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGT...CAGAGATGTACAGAAAAGCTGCTTGGGAAGCGTATTTGAGTAGACTTGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp ATGATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGACTTCTTGTGGGCTATaGTACTGTTGGCCAAGATTA +
Preference number: 5 (lower is better)
Translates to: MISEPRLPITSCGLLYCWTSCGL*YCWPRL
Trigger: TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGT...CCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TATCTCCTCCTGCTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAATTCTGGTTTTTGCCAATAACTTCTaGTGGGCTATTGTACTGTTG +
Preference number: 5 (lower is better)
Translates to: YLLLLPTELLESSEEILVFANNF*WAIVLL
Trigger: CAACAGTACAATAGCCCACAAGAAGTTATTGGCAAA...AACCAGAATTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp ATATCGGAACCTCGTTTGCCAATAACTTCTTGTGGGCTATTGTACTGTTGGCCATTTGCCAATAACTTCTaGTGGGCTATTGTACTGTTG +
Preference number: 5 (lower is better)
Translates to: ISEPRLPITSCGLLYCWPFANNF*WAIVLL
Trigger: CAACAGTACAATAGCCCACAAGAAGTTATTGGCAAA...TGGCCAACAGTACAATAGCCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TGGAGTCAAGTGAAGAAATTCTGGTTTCATGCTTACTCGGGAGCCAGAAATAAAATATCGGAACCTCGTTaGCCAATAACTTCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: WSQVKKFWFHAYSGARNKISEPR*PITSCG
Trigger: CCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT...TTTATTTCTGGCTCCCGAGTAAGCATGAAACCAGAATTTCTTCACTTGACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
CDS-3UTR CAA 90 bp ACACTAGATCCACTGGTGACAACATCTTCAATGATTAAACAGGTTTCTCCTGGAGCAGATAGACACAGATaGGTCTCCTTCTTTTGCATA +
Preference number: 5 (lower is better)
Translates to: TLDPLVTTSSMIKQVSPGADRHR*VSFFCI
Trigger: TATGCAAAAGAAGGAGACCAATCTGTGTCTATCTGC...TCCAGGAGAAACCTGTTTAATCATTGAAGATGTTGTCACCAGTGGATCTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp ACACTAGATCCACTGGTGACAACATCTTCAATGATTAAACAGGTTTCTCCTGGAAGAACTCATGGCATTTaGCCAGAGTTATCAACTCCT +
Preference number: 5 (lower is better)
Translates to: TLDPLVTTSSMIKQVSPGRTHGI*PELSTP
Trigger: AGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCT...TCCAGGAGAAACCTGTTTAATCATTGAAGATGTTGTCACCAGTGGATCTAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TCAAGAACTCATGGCATTTTGCCAGAGTTATCAACTCCTTCATCACATCCAGAGTTTGCCAATAACTTCTaGTGGGCTATTGTACTGTTG +
Preference number: 5 (lower is better)
Translates to: SRTHGILPELSTPSSHPEFANNF*WAIVLL
Trigger: CAACAGTACAATAGCCCACAAGAAGTTATTGGCAAA...CTCTGGATGTGATGAAGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000497791.5
CDS-3UTR CAA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATATCGGAACCTCGTTaGCCAATAACTTCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPISEPR*PITSCG
Trigger: CCCACAAGAAGTTATTGGCAAACGAGGTTCCGATAT...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp GTGACTTTCAGGAGGACCACATATCTTCAATGTCTTCACATTGTATCTGAAAAACCGAAGCTGAGTTCTTaGGGTGCTTCCATAATCCTT +
Preference number: 5 (lower is better)
Translates to: VTFRRTTYLQCLHIVSEKPKLSS*GASIIL
Trigger: AAGGATTATGGAAGCACCCAAAGAACTCAGCTTCGG...TTTTTCAGATACAATGTGAAGACATTGAAGATATGTGGTCCTCCTGAAAGTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474588.5
CDS-3UTR CAA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTAGAATCTCCAGCATTTaGGACAATGTACACACTGAG +
Preference number: 5 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPRISSI*DNVHTE
Trigger: CTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCT...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TTGGGACAATTATGTGGGATCCTTAAGCAAATACCCAAATGGAATCTTAGACCTATTGGTCTCCTTCTTTaGCATAAGCCTGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: LGQLCGILKQIPKWNLRPIGLLL*HKPEKL
Trigger: AAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAAT...AGGTCTAAGATTCCATTTGGGTATTTGCTTAAGGATCCCACATAATTGTCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATTGGTCTCCTTCTTTaGCATAAGCCTGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPIGLLL*HKPEKL
Trigger: AAGCTTCTCAGGCTTATGCAAAAGAAGGAGACCAAT...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AGATACCTCCTTCATACTGCTTTTTCACTGTGTTTCCTATATCTGCAAACTTCCACTTCTTGTGGGCTATaGTACTGTTGGCCAAGATTA +
Preference number: 5 (lower is better)
Translates to: RYLLHTAFSLCFLYLQTSTSCGL*YCWPRL
Trigger: TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGT...GGAAGTTTGCAGATATAGGAAACACAGTGAAAAAGCAGTATGAAGGAGGTATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
CDS-3UTR CAA 90 bp ACCTCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTACTTCTTGTGGGCTATaGTACTGTTGGCCAAGATTA +
Preference number: 5 (lower is better)
Translates to: TSSLQIIKKFRWTWWCMPTSCGL*YCWPRL
Trigger: TAATCTTGGCCAACAGTACAATAGCCCACAAGAAGT...AGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TCCAAAACACTAGATCCACTGGTGACAACATCTTCAATGATTAAACAGGTTTCTAGAATCTCCAGCATTTaGGACAATGTACACACTGAG +
Preference number: 5 (lower is better)
Translates to: SKTLDPLVTTSSMIKQVSRISSI*DNVHTE
Trigger: CTCAGTGTGTACATTGTCCAAAATGCTGGAGATTCT...AGAAACCTGTTTAATCATTGAAGATGTTGTCACCAGTGGATCTAGTGTTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AATGCGGTGATTACAAATTACTCAATATTTCCTAAAGACCATGAGAACTCCAGACCGAAGCTGAGTTCTTaGGGTGCTTCCTTTATAGAA +
Preference number: 5 (lower is better)
Translates to: NAVITNYSIFPKDHENSRPKLSS*GASFIE
Trigger: TTCTATAAAGGAAGCACCCAAAGAACTCAGCTTCGG...TCTGGAGTTCTCATGGTCTTTAGGAAATATTGAGTAATTTGTAATCACCGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp AATGCGGTGATTACAAATTACTCAATATTTCCTAAAGACCATGAGAACTCCAGACTCTTTGTATTTCTATaGCGGCCTTCCTTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: NAVITNYSIFPKDHENSRLFVFL*RPSFGR
Trigger: CCTTCCAAAGGAAGGCCGCAATAGAAATACAAAGAG...TCTGGAGTTCTCATGGTCTTTAGGAAATATTGAGTAATTTGTAATCACCGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp TTCACATTGTATCTGAAAAATGTATCTGAAGCACTCAAACACCAAGTCTACTCAAGAACTCATGGCATTTaGCCAGAGTTATCAACTCCT +
Preference number: 5 (lower is better)
Translates to: FTLYLKNVSEALKHQVYSRTHGI*PELSTP
Trigger: AGGAGTTGATAACTCTGGCAAAATGCCATGAGTTCT...TGAGTAGACTTGGTGTTTGAGTGCTTCAGATACATTTTTCAGATACAATGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS-3UTR CAA 90 bp TTGGGACAATTATGTGGGATCCTTAAGCAAATACCCAAATGGAATCTTAGACCTGGCCATCTATTCAGGTaGAAAAGAACCCATATTTTT +
Preference number: 5 (lower is better)
Translates to: LGQLCGILKQIPKWNLRPGHLFR*KRTHIF
Trigger: AAAAATATGGGTTCTTTTCAACCTGAATAGATGGCC...AGGTCTAAGATTCCATTTGGGTATTTGCTTAAGGATCCCACATAATTGTCCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000232607.7
CDS-3UTR CAA 90 bp TCATCTCTACAAATAATAAAGAAATTTAGATGGACGTGGTGGTGCATGCCTATATTTGCCAATAACTTCTaGTGGGCTATTGTACTGTTG +
Preference number: 5 (lower is better)
Translates to: SSLQIIKKFRWTWWCMPIFANNF*WAIVLL
Trigger: CAACAGTACAATAGCCCACAAGAAGTTATTGGCAAA...TATAGGCATGCACCACCACGTCCATCTAAATTTCTTTATTATTTGTAGAGATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
CDS GCA 72 bp CACGTCGTACAGACCCGTCACCAATGGCCCCAAAGCTaGACGAGCGACCGCCATTGTCGCGCGCTGCCTGTT +
Preference number: 6 (lower is better)
Translates to: HVVQTRHQWPQS*TSDRHCRALPV
Trigger: AACAGGCAGCGCGCGACAATGGCGGTCGCTCGTGCAGCTTTGGGGCCATTGGTGACGGGTCTGTACGACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
ENST00000628619.1
CDS CCA 72 bp GCGGTCGAGACACGATGCCCCGCAGATCGATGTAGATaGGGGAGGAAAGCCCGCTCTTCAGCACGAAGTCCC +
Preference number: 6 (lower is better)
Translates to: AVETRCPADRCR*GRKARSSARSP
Trigger: GGGACTTCGTGCTGAAGAGCGGGCTTTCCTCCCCCATCTACATCGATCTGCGGGGCATCGTGTCTCGACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
ENST00000628619.1
CDS CCA 72 bp CTTGAAAGCCTGCACGTCGTACAGACCCGTCACCAATaGCCCCAAAGCTGCACGAGCGACCGCCATTGTCGC +
Preference number: 6 (lower is better)
Translates to: LESLHVVQTRHQ*PQSCTSDRHCR
Trigger: GCGACAATGGCGGTCGCTCGTGCAGCTTTGGGGCCATTGGTGACGGGTCTGTACGACGTGCAGGCTTTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
ENST00000628619.1
CDS GCA 72 bp CTGCAACCTGACTCAGAAGACGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGATGGGGGAGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: LQPDSEDAVETR*PADRCRWGRKA
Trigger: GGCTTTCCTCCCCCATCTACATCGATCTGCGGGGCATCGTGTCTCGACCGCGTCTTCTGAGTCAGGTTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232607.7
ENST00000474588.5
ENST00000479719.5
CDS CAA 72 bp TCACCAATGGCCCCAAAGCTGCACGAGCGACCGCCATaGTCGCGCGCTGCCTGTTTGCTTCAAATTCCCAGG +
Preference number: 6 (lower is better)
Translates to: SPMAPKLHERPP*SRAACLLQIPR
Trigger: CCTGGGAATTTGAAGCAAACAGGCAGCGCGCGACAATGGCGGTCGCTCGTGCAGCTTTGGGGCCATTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462091.5
CDS GCA 72 bp ATCCCATCTGACTCAGAAGACGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGATGGGGGAGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: IPSDSEDAVETR*PADRCRWGRKA
Trigger: GGCTTTCCTCCCCCATCTACATCGATCTGCGGGGCATCGTGTCTCGACCGCGTCTTCTGAGTCAGATGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000460034.5
ENST00000467167.5
ENST00000628619.1
CDS GCA 72 bp CCGCTCTTCAGCACGAAGTCCCCAAACTTGAAAGCCTaGACGTCGTACAGACCCGTCACCAATGGCCCCAAA +
Preference number: 6 (lower is better)
Translates to: PLFSTKSPNLKA*TSYRPVTNGPK
Trigger: TTTGGGGCCATTGGTGACGGGTCTGTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCGTGCTGAAGAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
ENST00000628619.1
CDS GCA 72 bp TTAGTTCCTGACTCAGAAGACGCGGTCGAGACACGATaGCCCGCAGATCGATGTAGATGGGGGAGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: LVPDSEDAVETR*PADRCRWGRKA
Trigger: GGCTTTCCTCCCCCATCTACATCGATCTGCGGGGCATCGTGTCTCGACCGCGTCTTCTGAGTCAGGAACTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462091.5
ENST00000497791.5
CDS TCA 72 bp AGGAAAGCCCGCTCTTCAGCACGAAGTCCCCAAACTTaGAAGCCTGCACGTCGTACAGACCCGTCACCAATG +
Preference number: 6 (lower is better)
Translates to: RKARSSARSPQT*KPARRTDPSPM
Trigger: CATTGGTGACGGGTCTGTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCGTGCTGAAGAGCGGGCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
ENST00000628619.1
CDS CAA 72 bp GAGGAAAGCCCGCTCTTCAGCACGAAGTCCCCAAACTaGAAAGCCTGCACGTCGTACAGACCCGTCACCAAT +
Preference number: 6 (lower is better)
Translates to: EESPLFSTKSPN*KACTSYRPVTN
Trigger: ATTGGTGACGGGTCTGTACGACGTGCAGGCTTTCAAGTTTGGGGACTTCGTGCTGAAGAGCGGGCTTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000232607.7
ENST00000460034.5
ENST00000462091.5
ENST00000467167.5
ENST00000474588.5
ENST00000479719.5
ENST00000497791.5
ENST00000628619.1
CDS GCA 72 bp TTGGAAGAGCCACGACCAGTGACCAGATTTACCTCCTaGTTCCAACTGAACTCCTGGAGTCAAGTGAAGAAA +
Preference number: 6 (lower is better)
Translates to: LEEPRPVTRFTS*FQLNSWSQVKK
Trigger: TTTCTTCACTTGACTCCAGGAGTTCAGTTGGAAGCAGGAGGTAAATCTGGTCACTGGTCGTGGCTCTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487622.5
CDS GCA 72 bp CCTTTATGTGGAATTTTCATTCAAAACATCATATTCTaGCAAGGACATCTGTCAAATTTGCTTGCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: PLCGIFIQNIIF*QGHLSNLLAQA
Trigger: TGCCTGGGCAAGCAAATTTGACAGATGTCCTTGGCAGAATATGATGTTTTGAATGAAAATTCCACATAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495751.1