Pregenerated sensors for UGT2B15 (Homo sapiens)

Ensembl gene IDs: ENSG00000196620

Ensembl transcript IDs: ENST00000338206.6, ENST00000611777.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR TCA 90 bp	GTGCCATGTTGGCGTGCTGCATCCAGTAACTCGTCATTTAACATTAGGTATATCGCTTTGGTTTTGGGATaGCCAAGAAGGTCATTCTGG	+
Preference number: 4 (lower is better) Translates to: VPCWRAASSNSSFNIRYIALVLG*PRRSFW Trigger: CCAGAATGACCTTCTTGGTCATCCCAAAACCAAAGC...GATATACCTAATGTTAAATGACGAGTTACTGGATGCAGCACGCCAACATGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338206.6 ENST00000611777.2
CDS-3UTR TCA 90 bp	TGCCATGTTGGCGTGCTGCATCCAGTAACTCGTCATTTAACATTAGGTATATCTGCTTTGGTTTTGGGATaGCCAAGAAGGTCATTCTGG	+
Preference number: 4 (lower is better) Translates to: CHVGVLHPVTRHLTLGISALVLG*PRRSFW Trigger: CCAGAATGACCTTCTTGGTCATCCCAAAACCAAAGC...AGATATACCTAATGTTAAATGACGAGTTACTGGATGCAGCACGCCAACATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338206.6 ENST00000611777.2
CDS-3UTR GCA 90 bp	GTGCCATGTTGGCGTGCTGCATCCAGTAACTCGTCATTTAACATTAGGTATATCGTTTTAGGGTACATGTaGACAACGTGCAGGTTAGCT	+
Preference number: 4 (lower is better) Translates to: VPCWRAASSNSSFNIRYIVLGYM*TTCRLA Trigger: AGCTAACCTGCACGTTGTGCACATGTACCCTAAAAC...GATATACCTAATGTTAAATGACGAGTTACTGGATGCAGCACGCCAACATGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338206.6 ENST00000611777.2
CDS-3UTR GCA 90 bp	GTGCCATGTTGGCGTGCTGCATCCAGTAACTCGTCATTTAACATTAGGTATATCACATATGTATACATGTaGCATGTTGGCGTGCTGCAT	+
Preference number: 4 (lower is better) Translates to: VPCWRAASSNSSFNIRYITYVYM*HVGVLH Trigger: ATGCAGCACGCCAACATGGCACATGTATACATATGT...GATATACCTAATGTTAAATGACGAGTTACTGGATGCAGCACGCCAACATGGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338206.6 ENST00000611777.2
CDS-3UTR GCA 90 bp	TACATGTGCCATGTTGGCGTGCTGCATCCAGTAACTCGTCATTTAACATTAGGTACATATGTATACATGTaGCATGTTGGCGTGCTGCAT	+
Preference number: 4 (lower is better) Translates to: YMCHVGVLHPVTRHLTLGTYVYM*HVGVLH Trigger: ATGCAGCACGCCAACATGGCACATGTATACATATGT...ACCTAATGTTAAATGACGAGTTACTGGATGCAGCACGCCAACATGGCACATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338206.6 ENST00000611777.2
CDS-3UTR GCA 90 bp	GTATACATGTGCCATGTTGGCGTGCTGCATCCAGTAACTCGTCATTTAACATTAGTTTTAGGGTACATGTaGACAACGTGCAGGTTAGCT	+
Preference number: 4 (lower is better) Translates to: VYMCHVGVLHPVTRHLTLVLGYM*TTCRLA Trigger: AGCTAACCTGCACGTTGTGCACATGTACCCTAAAAC...TAATGTTAAATGACGAGTTACTGGATGCAGCACGCCAACATGGCACATGTATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338206.6 ENST00000611777.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu