Pregenerated sensors for UCN (Homo sapiens)
Ensembl gene IDs: ENSG00000163794Ensembl transcript IDs: ENST00000296099.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGTGGGGGGCCACCCTGGTTCCGTaGCCCGGGGCTCCAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: HADSALVALPRIPTLGWGATLVP*PGAPAQ Trigger: CTGCGCTGGAGCCCCGGGGCACGGAACCAGGGTGGC...CCCCCACCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTG 72% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR GCA 90 bp | CACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGTGGGGGCGCTCCCGCTGGCTCTaGGTCCGCGCCAGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HADSALVALPRIPTLGWGRSRWL*VRASSS Trigger: GCTGGAGCTGGCGCGGACGCAGAGCCAGCGGGAGCG...CCCCCACCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CCA 90 bp | TCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGTGGGGGCCTCGGGGCTCCTCTaGCTGCTCCCAGGGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: SRRQCPGGSAPHPNSGVGASGLL*LLPGHS Trigger: GCTGTGCCCTGGGAGCAGCCAGAGGAGCCCCGAGGC...CCCCACCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR GCA 90 bp | CACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGTGGGGGGTGCCCTGGTGGCTCTaGCCCGCATCCCAACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: HADSALVALPRIPTLGWGVPWWL*PASQLW Trigger: CCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCAC...CCCCCACCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTG 69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CCA 90 bp | CACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGTGGGGGACGCAGACAGTGCCCTaGTGGCTCTGCCCCGCATCC | + |
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Preference number: 4 (lower is better) Translates to: HADSALVALPRIPTLGWGTQTVP*WLCPAS Trigger: GGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGT...CCCCCACCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR GCA 90 bp | AATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGCGCGGCCAGCAGCGCTaGGCGTCCCGCCTGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: NSHADSALVALPRIPTLGRGQQR*ASRLPH Trigger: ATGAGGCAGGCGGGACGCGCAGCGCTGCTGGCCGCG...CCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR GCA 90 bp | AATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGCCGCGGCCGCTCGCCTaGCGTCCCGAGTCCCAATCG | + |
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Preference number: 4 (lower is better) Translates to: NSHADSALVALPRIPTLGPRPLA*RPESQS Trigger: CGATTGGGACTCGGGACGGCAGGCGAGCGGCCGCGG...CCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CCA 90 bp | AATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGTTCGAGTCTGACGGCTaGCGGGCCCCCGGAGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: NSHADSALVALPRIPTLGFESDG*RAPGGA Trigger: CGCCCCTCCGGGGGCCCGCCAGCCGTCAGACTCGAA...CCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR GCA 90 bp | AATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGCCGCCTGCCTCATGGTaGCGCCGGCCAGGTTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: NSHADSALVALPRIPTLGPPASW*RRPGCR Trigger: CCGACAACCTGGCCGGCGGCACCATGAGGCAGGCGG...CCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR TCA 90 bp | AAAAATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGCCACAGCTTCGAGTCTaGCGGCTGGCGGGCCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: KNSHADSALVALPRIPTLPQLRV*RLAGPR Trigger: CCGGGGGCCCGCCAGCCGTCAGACTCGAAGCTGTGG...CAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATTTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR TCA 90 bp | TCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGTGGGGCAGGACAGCTCCGACTaGCGTCAGCGAAGAACATGC | + |
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Preference number: 4 (lower is better) Translates to: SRRQCPGGSAPHPNSGVGQDSSD*RQRRTC Trigger: GCATGTTCTTCGCTGACGTCAGTCGGAGCTGTCCTG...CCCCACCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR TCA 90 bp | AATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGTCCCTCGGGGCAGGCTaGAGACGCCTTGGGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: NSHADSALVALPRIPTLGSLGAG*RRLGEH Trigger: GTGTTCCCCAAGGCGTCTTCAGCCTGCCCCGAGGGA...CCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR TCA 90 bp | CACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGTGGGGGTGTACGGTCCAAGATTaGGCTCCAGTCTCTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: HADSALVALPRIPTLGWGCTVQD*APVSVP Trigger: AGGGACAGAGACTGGAGCTCAATCTTGGACCGTACA...CCCCCACCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CCA 90 bp | AATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGCCCGCATCCCAACTCTaGGGTGGGGGAAAGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: NSHADSALVALPRIPTLGPASQL*GGGKGS Trigger: TGACCCCTTTCCCCCACCCCAGAGTTGGGATGCGGG...CCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR GCA 90 bp | AATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGAATATGATGCGGTTCTaGTCGGCGCGCTCCCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NSHADSALVALPRIPTLGNMMRF*SARSRW Trigger: CCAGCGGGAGCGCGCCGAGCAGAACCGCATCATATT...CCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CCA 90 bp | AAAAATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGTCCCGCCTGCCTCATaGTGCCGCCGGCCAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: KNSHADSALVALPRIPTLVPPAS*CRRPGC Trigger: ACAACCTGGCCGGCGGCACCATGAGGCAGGCGGGAC...CAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATTTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR TCA 90 bp | AATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGAGGGTCCGCAGCAGGTaGAAGGTGAGGTCAATGGAC | + |
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Preference number: 4 (lower is better) Translates to: NSHADSALVALPRIPTLGRVRSR*KVRSMD Trigger: GTCCATTGACCTCACCTTTCACCTGCTGCGGACCCT...CCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CCA 90 bp | AATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGAGGCTGAAGACGCCTTaGGGAACACAGGGTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NSHADSALVALPRIPTLGRLKTP*GTQGLS Trigger: GGACAGACCCTGTGTTCCCCAAGGCGTCTTCAGCCT...CCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CCA 90 bp | AAAAATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGCAGACAGTGCCCTGGTaGCTCTGCCCCGCATCCCAA | + |
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Preference number: 4 (lower is better) Translates to: KNSHADSALVALPRIPTLQTVPW*LCPASQ Trigger: TTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTG...CAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR TCA 90 bp | AAAAATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGCCACCGAGTCGAATATaGTGCGGTTCTGCTCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: KNSHADSALVALPRIPTLPPSRI*CGSARR Trigger: GCGCCGAGCAGAACCGCATCATATTCGACTCGGTGG...CAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR GCA 90 bp | AATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGCGTCAGCGAAGAACATaGACTGATTGTAGAAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: NSHADSALVALPRIPTLGRQRRT*TDCRSN Trigger: ATTGCTTCTACAATCAGTGCATGTTCTTCGCTGACG...CCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS GCA 90 bp | GAGGTCAATGGACAGAGAAGGGTTGTCCCGCCGCGGCCGCTCGCCTaGCGTCCCGAGTCCCAATCGGCCGGGCCCCGCGCGGCGCGGGAA | + |
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Preference number: 5 (lower is better) Translates to: EVNGQRRVVPPRPLA*RPESQSAGPRAARE Trigger: TTCCCGCGCCGCGCGGGGCCCGGCCGATTGGGACTCGGGACGGCAGGCGAGCGGCCGCGGCGGGACAACCCTTCTCTGTCCATTGACCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CAA 90 bp | CACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGTGGGGGATGGACAGAGAAGGGTaGTCCCGCCGCGGCCGCTCG | + |
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Preference number: 5 (lower is better) Translates to: HADSALVALPRIPTLGWGMDREG*SRRGRS Trigger: CGAGCGGCCGCGGCGGGACAACCCTTCTCTGTCCAT...CCCCCACCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS TCA 90 bp | TTCGCAGCCCCAAACCGGGCCATCACTTGCCCACCGAGTCGAATATaGTGCGGTTCTGCTCGGCGCGCTCCCGCTGGCTCTGCGTCCGCG | + |
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Preference number: 5 (lower is better) Translates to: FAAPNRAITCPPSRI*CGSARRAPAGSASA Trigger: CGCGGACGCAGAGCCAGCGGGAGCGCGCCGAGCAGAACCGCATCATATTCGACTCGGTGGGCAAGTGATGGCCCGGTTTGGGGCTGCGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS GCA 90 bp | AAACCGGGCCATCACTTGCCCACCGAGTCGAATATGATGCGGTTCTaGTCGGCGCGCTCCCGCTGGCTCTGCGTCCGCGCCAGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: KPGHHLPTESNMMRF*SARSRWLCVRASSS Trigger: GCTGGAGCTGGCGCGGACGCAGAGCCAGCGGGAGCGCGCCGAGCAGAACCGCATCATATTCGACTCGGTGGGCAAGTGATGGCCCGGTTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CAA 90 bp | CACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGGGTGGGGGCAGGCTGAAGACGCCTaGGGGAACACAGGGTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: HADSALVALPRIPTLGWGQAEDA*GNTGSV Trigger: GACAGACCCTGTGTTCCCCAAGGCGTCTTCAGCCTG...CCCCCACCCCAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS TCA 90 bp | GTGCCGCCGGCCAGGTTGTCGGCGAGCGTCTGTACGGTCCAAGATTaGGCTCCAGTCTCTGTCCCTCGGGGCAGGCTGAAGACGCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: VPPARLSASVCTVQD*APVSVPRGRLKTPW Trigger: CCAAGGCGTCTTCAGCCTGCCCCGAGGGACAGAGACTGGAGCTCAATCTTGGACCGTACAGACGCTCGCCGACAACCTGGCCGGCGGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CAA 90 bp | AAAAATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGGTGCCGCCGGCCAGGTaGTCGGCGAGCGTCTGTACG | + |
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Preference number: 5 (lower is better) Translates to: KNSHADSALVALPRIPTLVPPAR*SASVCT Trigger: CGTACAGACGCTCGCCGACAACCTGGCCGGCGGCAC...CAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATTTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CAA 90 bp | AAAAATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGCTGTACGGTCCAAGATaGAGCTCCAGTCTCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: KNSHADSALVALPRIPTLLYGPR*SSSLCP Trigger: GGGACAGAGACTGGAGCTCAATCTTGGACCGTACAG...CAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS-3UTR CAA 90 bp | AAAAATAGTCACGCAGACAGTGCCCTGGTGGCTCTGCCCCGCATCCCAACTCTGAAACCGGGCCATCACTaGCCCACCGAGTCGAATATG | + |
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Preference number: 5 (lower is better) Translates to: KNSHADSALVALPRIPTLKPGHH*PTESNM Trigger: CATATTCGACTCGGTGGGCAAGTGATGGCCCGGTTT...CAGAGTTGGGATGCGGGGCAGAGCCACCAGGGCACTGTCTGCGTGACTATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS GCA 72 bp | GGACAGAGAAGGGTTGTCCCGCCGCGGCCGCTCGCCTaGCGTCCCGAGTCCCAATCGGCCGGGCCCCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: GQRRVVPPRPLA*RPESQSAGPRA Trigger: CGCGCGGGGCCCGGCCGATTGGGACTCGGGACGGCAGGCGAGCGGCCGCGGCGGGACAACCCTTCTCTGTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS CCA 72 bp | GCGCGGCCAGCAGCGCTGCGCGTCCCGCCTGCCTCATaGTGCCGCCGGCCAGGTTGTCGGCGAGCGTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: ARPAALRVPPAS*CRRPGCRRASV Trigger: TACAGACGCTCGCCGACAACCTGGCCGGCGGCACCATGAGGCAGGCGGGACGCGCAGCGCTGCTGGCCGCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS GCA 72 bp | ATGATGCGGTTCTGCTCGGCGCGCTCCCGCTGGCTCTaGGTCCGCGCCAGCTCCAGCAGGGTCCGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: MMRFCSARSRWL*VRASSSRVRSR Trigger: CCTGCTGCGGACCCTGCTGGAGCTGGCGCGGACGCAGAGCCAGCGGGAGCGCGCCGAGCAGAACCGCATCAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS CCA 72 bp | TCGAATATGATGCGGTTCTGCTCGGCGCGCTCCCGCTaGCTCTGCGTCCGCGCCAGCTCCAGCAGGGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: SNMMRFCSARSR*LCVRASSSRVR Trigger: GCGGACCCTGCTGGAGCTGGCGCGGACGCAGAGCCAGCGGGAGCGCGCCGAGCAGAACCGCATCATATTCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS CCA 72 bp | CCAGTCTCTGTCCCTCGGGGCAGGCTGAAGACGCCTTaGGGAACACAGGGTCTGTCCCGGGGCTGTCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PVSVPRGRLKTP*GTQGLSRGCRQ Trigger: CTGGCGACAGCCCCGGGACAGACCCTGTGTTCCCCAAGGCGTCTTCAGCCTGCCCCGAGGGACAGAGACTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS GCA 72 bp | CATCACTTGCCCACCGAGTCGAATATGATGCGGTTCTaGTCGGCGCGCTCCCGCTGGCTCTGCGTCCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: HHLPTESNMMRF*SARSRWLCVRA Trigger: GGCGCGGACGCAGAGCCAGCGGGAGCGCGCCGAGCAGAACCGCATCATATTCGACTCGGTGGGCAAGTGATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS CCA 72 bp | AGAAGCAATGACAGCCACAGCTTCGAGTCTGACGGCTaGCGGGCCCCCGGAGGGGCGCACCTCCCTACACCA | + |
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Preference number: 6 (lower is better) Translates to: RSNDSHSFESDG*RAPGGAHLPTP Trigger: TGGTGTAGGGAGGTGCGCCCCTCCGGGGGCCCGCCAGCCGTCAGACTCGAAGCTGTGGCTGTCATTGCTTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS CAA 90 bp | GGTGCCGCCGGCCAGGTTGTCGGCGAGCGTCTGTACGGTCCAAGATaGAGCTCCAGTCTCTGTCCCTCGGGGCAGGCTGAAGACGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GAAGQVVGERLYGPR*SSSLCPSGQAEDAL Trigger: CAAGGCGTCTTCAGCCTGCCCCGAGGGACAGAGACTGGAGCTCAATCTTGGACCGTACAGACGCTCGCCGACAACCTGGCCGGCGGCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS TCA 72 bp | CCAAACCGGGCCATCACTTGCCCACCGAGTCGAATATaGTGCGGTTCTGCTCGGCGCGCTCCCGCTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PNRAITCPPSRI*CGSARRAPAGS Trigger: AGAGCCAGCGGGAGCGCGCCGAGCAGAACCGCATCATATTCGACTCGGTGGGCAAGTGATGGCCCGGTTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS TCA 72 bp | GCCAGGTTGTCGGCGAGCGTCTGTACGGTCCAAGATTaGGCTCCAGTCTCTGTCCCTCGGGGCAGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: ARLSASVCTVQD*APVSVPRGRLK Trigger: CTTCAGCCTGCCCCGAGGGACAGAGACTGGAGCTCAATCTTGGACCGTACAGACGCTCGCCGACAACCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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| CDS CAA 72 bp | GGTCAACGTTTTCGCAGCCCCAAACCGGGCCATCACTaGCCCACCGAGTCGAATATGATGCGGTTCTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: GQRFRSPKPGHH*PTESNMMRFCS Trigger: CGAGCAGAACCGCATCATATTCGACTCGGTGGGCAAGTGATGGCCCGGTTTGGGGCTGCGAAAACGTTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296099.2 |
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