RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UCHL5 (Homo sapiens)

Ensembl gene IDs: ENSG00000116750

Ensembl transcript IDs: ENST00000367448.5, ENST00000367449.5, ENST00000367450.7, ENST00000367451.8, ENST00000367454.6, ENST00000367455.8, ENST00000416915.1, ENST00000417752.1, ENST00000420791.5, ENST00000421683.1, ENST00000443327.5, ENST00000449480.5

Found 400 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTGCAAAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTTaGATGGGAGTAATCTCTGGAGACTTAAGCTTGAAACCGCTCCTC +
Preference number: 1 (lower is better)
Translates to: VAKVSSSLGTPILYV*MGVISGDLSLKPLL
Trigger: GAGGAGCGGTTTCAAGCTTAAGTCTCCAGAGATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTTTGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR CCA 90 bp GTAGGGAAGAAGTTTATGAATCCATGCATTAAAGACAAGACAGGCTaGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTC +
Preference number: 1 (lower is better)
Translates to: VGKKFMNPCIKDKTG*HYCQTCTEPIRMLL
Trigger: GAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATTCATAAACTTCTTCCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
3UTR CCA 90 bp TTCCCTAGGTACACCAATACTGTATGTTTGGATGGGAGTAATCTCTaGAGACTTAAGCTTGAAACCGCTCCTCCAAACCTTCCAATGATT +
Preference number: 1 (lower is better)
Translates to: FPRYTNTVCLDGSNL*RLKLETAPPNLPMI
Trigger: AATCATTGGAAGGTTTGGAGGAGCGGTTTCAAGCTTAAGTCTCCAGAGATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR GCA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTaGTCTAAGTTCTTTATACATAATGGTTTCCATGAAAATATGTGC +
Preference number: 1 (lower is better)
Translates to: QAGTIAKRALSQLGC*SKFFIHNGFHENMC
Trigger: GCACATATTTTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
3UTR TCA 90 bp ATGGGTTGCTCTTTATTCTTCCATTTTCTCTACCCTCTAGCTTCATaGCTTAATTTCAAACCAGCAACATATAGCACCCAGACAAGTCAC +
Preference number: 1 (lower is better)
Translates to: MGCSLFFHFLYPLAS*LNFKPATYSTQTSH
Trigger: GTGACTTGTCTGGGTGCTATATGTTGCTGGTTTGAAATTAAGTCATGAAGCTAGAGGGTAGAGAAAATGGAAGAATAAAGAGCAACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR GCA 90 bp ACATGTTCTAACATTAATAGTTCCAACAGTGAACTCCCTGACTGTTaGAAAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTTG +
Preference number: 1 (lower is better)
Translates to: TCSNINSSNSELPDC*KSEQFPRYTNTVCL
Trigger: CAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTCACTGTTGGAACTATTAATGTTAGAACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR TCA 90 bp TTCCAGTGCACAGTCATTAAGTGTTACAGCAGGTTCCTCATTCCTTaGACACAACTACTGCAACATGTTCTAACATTAATAGTTCCAACA +
Preference number: 1 (lower is better)
Translates to: FQCTVIKCYSRFLIP*TQLLQHVLTLIVPT
Trigger: TGTTGGAACTATTAATGTTAGAACATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAACCTGCTGTAACACTTAATGACTGTGCACTGGAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR TCA 90 bp AGTTCCAACAGTGAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACGTGGCACAGTCGAGCTaGCTGCTGTTCGGAAAAGGG +
Preference number: 2 (lower is better)
Translates to: SSNSELPDCCKSEQFPRYVAQSS*LLFGKG
Trigger: CCCTTTTCCGAACAGCAGTCAGCTCGACTGTGCCAC...GTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTCACTGTTGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR GCA 90 bp AAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTCACTATTGCCAAACGTaGACTGAGCCAATTAGGATG +
Preference number: 2 (lower is better)
Translates to: KTRQAGTIAKRALSQLGCHYCQT*TEPIRM
Trigger: CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTG...ACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
3UTR-3UTR CCA 90 bp GCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAAAAGACAAGACAGGCTaGCACTATTGCCAAACGTGC +
Preference number: 2 (lower is better)
Translates to: ALKTRQAGTIAKRALSQLKDKTG*HYCQTC
Trigger: GCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT...TAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
3UTR-3UTR TCA 90 bp AGTTCCAACAGTGAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACTCTGGCTCCATTTGTTaGAAAGACTTTCCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: SSNSELPDCCKSEQFPRYSGSIC*KDFPSL
Trigger: CAGAGAAGGAAAGTCTTTTCAACAAATGGAGCCAGA...GTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTCACTGTTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR TCA 90 bp AGTTCCAACAGTGAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACTCAAAGTCATTTTTGTaGGGTAGGGGGTCATTGTTC +
Preference number: 2 (lower is better)
Translates to: SSNSELPDCCKSEQFPRYSKSFL*GRGSLF
Trigger: GAACAATGACCCCCTACCTCACAAAAATGACTTTGA...GTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTCACTGTTGGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR TCA 90 bp GAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACACCAATACTGTAGGTTACTGCTTTCTGTaGCCTAAGAAACCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: ELPDCCKSEQFPRYTNTVGYCFL*PKKPLA
Trigger: AGCCAAAGGTTTCTTAGGTCACAGAAAGCAGTAACC...TACAGTATTGGTGTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR GCA 90 bp GTTGTATTACATACTTATTATCTGTCTCACCATGAGAGCAGGGGCTTTTTCCTGACAGGCTGGCACTATTaGCAAACGTGCACTGAGCCA +
Preference number: 2 (lower is better)
Translates to: VVLHTYYLSHHESRGFFLTGWHY*QTCTEP
Trigger: TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGT...CAGGAAAAAGCCCCTGCTCTCATGGTGAGACAGATAATAAGTATGTAATACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR CAA 90 bp TGTTGCAAAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTaGGATGGGAGTAATCTCTGGAGACTTAAGCTTGAAACCGCTCCT +
Preference number: 2 (lower is better)
Translates to: CCKSEQFPRYTNTVC*DGSNLWRLKLETAP
Trigger: AGGAGCGGTTTCAAGCTTAAGTCTCCAGAGATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTTTGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR TCA 90 bp AAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTTGGATGGGAGTAATCAAGTCCCCGTGGTTGTaGTTCCCGAGCAAATATTTG +
Preference number: 2 (lower is better)
Translates to: KVSSSLGTPILYVWMGVIKSPWL*FPSKYL
Trigger: CAAATATTTGCTCGGGAATCACAACCACGGGGACTT...GATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR TCA 90 bp ATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGCTTCATTTGGTTTCCTaGGCTTTCTTTGCGTTCTGT +
Preference number: 2 (lower is better)
Translates to: IKDKTGWHYCQTCTEPIRLHLVS*AFFAFC
Trigger: ACAGAACGCAAAGAAAGCTCAGGAAACCAAATGAAG...CCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420791.5
ENST00000449480.5
3UTR-3UTR GCA 90 bp CACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAAACAGGCTGGCACTATTaGCAAACGTGCACTGAGCCA +
Preference number: 2 (lower is better)
Translates to: HYMHMMQVGKKFMNPCIKTGWHY*QTCTEP
Trigger: TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGT...TTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
3UTR-3UTR GCA 90 bp TACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAAGACACAGGCTGGCACTATTaGCAAACGTGCACTGAGCCA +
Preference number: 2 (lower is better)
Translates to: YMHMMQVGKKFMNPCIKDTGWHY*QTCTEP
Trigger: TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGT...GTCTTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
3UTR-3UTR TCA 90 bp AAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTTGGATGGGAGTAATCGGTTACTGCTTTCTGTaGCCTAAGAAACCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: KVSSSLGTPILYVWMGVIGYCFL*PKKPLA
Trigger: AGCCAAAGGTTTCTTAGGTCACAGAAAGCAGTAACC...GATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR GCA 90 bp GTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTAGTAGCACTGCATGGTaGAGCCATATCTTTCCTGTT +
Preference number: 2 (lower is better)
Translates to: VESQHIVALHGAAISFLFSSTAW*SHIFPV
Trigger: AACAGGAAAGATATGGCTGCACCATGCAGTGCTACT...AAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
3UTR-3UTR CCA 90 bp CATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCTATAGTAGCACTGCATaGTGCAGCCATATCTTTCCT +
Preference number: 2 (lower is better)
Translates to: HPVESQHIVALHGAAISFYSSTA*CSHIFP
Trigger: AGGAAAGATATGGCTGCACCATGCAGTGCTACTATA...GAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
3UTR-3UTR TCA 90 bp AAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTTGGATGGGAGTAATCGCTGAAATAAACGAATaGGATCAAGATGAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: KVSSSLGTPILYVWMGVIAEINE*DQDEPS
Trigger: GGAAGGCTCATCTTGATCTCATTCGTTTATTTCAGC...GATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR CCA 90 bp AGGTTTAACTTTTCTGCATTCCAGTGCACAGTCATTAAGTGTTACAGCAGGTTCGCTGAAGCTGGAAGATaGGTACACATTCTCCCTAAT +
Preference number: 2 (lower is better)
Translates to: RFNFSAFQCTVIKCYSRFAEAGR*VHILPN
Trigger: ATTAGGGAGAATGTGTACCCATCTTCCAGCTTCAGC...GAACCTGCTGTAACACTTAATGACTGTGCACTGGAATGCAGAAAAGTTAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR TCA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATCTTCATTTGGTTTCCTaGGCTTTCTTTGCGTTCTGT +
Preference number: 2 (lower is better)
Translates to: YALHAHDAGREEVYESMHLHLVS*AFFAFC
Trigger: ACAGAACGCAAAGAAAGCTCAGGAAACCAAATGAAG...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420791.5
ENST00000449480.5
3UTR-3UTR GCA 90 bp TCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGAAGTAGCACTGCATGGTaGAGCCATATCTTTCCTGTT +
Preference number: 2 (lower is better)
Translates to: SSQIIGNCLSYSKISSCRSSTAW*SHIFPV
Trigger: AACAGGAAAGATATGGCTGCACCATGCAGTGCTACT...TCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
3UTR-3UTR CCA 90 bp GTTCCTCATTCCTTGAACACAACTACTGCAACATGTTCTAACATTAATAGTTCCAAAGACAAGACAGGCTaGCACTATTGCCAAACGTGC +
Preference number: 2 (lower is better)
Translates to: VPHSLNTTTATCSNINSSKDKTG*HYCQTC
Trigger: GCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT...GGAACTATTAATGTTAGAACATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR TCA 90 bp AAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTTGGATGGGAGTAATCCACAGCTTACAAGCTTaGAACAATATTCCATTGAGA +
Preference number: 2 (lower is better)
Translates to: KVSSSLGTPILYVWMGVIHSLQA*NNIPLR
Trigger: TCTCAATGGAATATTGTTTCAAGCTTGTAAGCTGTG...GATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR GCA 90 bp ACGAAATTTATTCAAATTGGCATAGAAAGACCCCCATCACCACTACCATCTTTTCACTATTGCCAAACGTaGACTGAGCCAATTAGGATG +
Preference number: 2 (lower is better)
Translates to: TKFIQIGIERPPSPLPSFHYCQT*TEPIRM
Trigger: CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTG...AAAAGATGGTAGTGGTGATGGGGGTCTTTCTATGCCAATTTGAATAAATTTCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR GCA 90 bp AGGTCAAATACTTTTATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAGTAGCACTGCATGGTaGAGCCATATCTTTCCTGTT +
Preference number: 2 (lower is better)
Translates to: RSNTFMSSQIIGNCLSYSSSTAW*SHIFPV
Trigger: AACAGGAAAGATATGGCTGCACCATGCAGTGCTACT...TGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATAAAAGTATTTGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
3UTR-3UTR TCA 90 bp CTTTATTCACAGACAGAAGTAATCATGAAGTATCACAAGGGATTTGCAATCACCTCCTTAAAAATGTGCTaGAGCTGGAAGATGGGTACA +
Preference number: 2 (lower is better)
Translates to: LYSQTEVIMKYHKGFAITSLKMC*SWKMGT
Trigger: TGTACCCATCTTCCAGCTTCAGCACATTTTTAAGGA...GGTGATTGCAAATCCCTTGTGATACTTCATGATTACTTCTGTCTGTGAATAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR TCA 90 bp GTTCCTCATTCCTTGAACACAACTACTGCAACATGTTCTAACATTAATAGTTCCGCTGAAATAAACGAATaGGATCAAGATGAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: VPHSLNTTTATCSNINSSAEINE*DQDEPS
Trigger: GGAAGGCTCATCTTGATCTCATTCGTTTATTTCAGC...GGAACTATTAATGTTAGAACATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR CCA 90 bp AGGTCAAATACTTTTATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCATATAGTAGCACTGCATaGTGCAGCCATATCTTTCCT +
Preference number: 2 (lower is better)
Translates to: RSNTFMSSQIIGNCLSYSYSSTA*CSHIFP
Trigger: AGGAAAGATATGGCTGCACCATGCAGTGCTACTATA...TGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATAAAAGTATTTGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
3UTR-3UTR CCA 90 bp CTTTATTCACAGACAGAAGTAATCATGAAGTATCACAAGGGATTTGCAATCACCGAAATTTATTCAAATTaGCATAGAAAGACCCCCATC +
Preference number: 2 (lower is better)
Translates to: LYSQTEVIMKYHKGFAITEIYSN*HRKTPI
Trigger: GATGGGGGTCTTTCTATGCCAATTTGAATAAATTTC...GGTGATTGCAAATCCCTTGTGATACTTCATGATTACTTCTGTCTGTGAATAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR CCA 90 bp CTTTATTCACAGACAGAAGTAATCATGAAGTATCACAAGGGATTTGCAATCACCTCAGCTATTCTATTCTaGCTCCATTTGTTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: LYSQTEVIMKYHKGFAITSAILF*LHLLKR
Trigger: TCTTTTCAACAAATGGAGCCAGAATAGAATAGCTGA...GGTGATTGCAAATCCCTTGTGATACTTCATGATTACTTCTGTCTGTGAATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR CCA 90 bp CTTTATTCACAGACAGAAGTAATCATGAAGTATCACAAGGGATTTGCAATCACCATTTTGGATCTTTTATaGTTACTGCTTTCTGTGACC +
Preference number: 2 (lower is better)
Translates to: LYSQTEVIMKYHKGFAITILDLL*LLLSVT
Trigger: GGTCACAGAAAGCAGTAACCATAAAAGATCCAAAAT...GGTGATTGCAAATCCCTTGTGATACTTCATGATTACTTCTGTCTGTGAATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR TCA 72 bp AGCAAATATTTGTCTGTTTTAGTGGCACAGTCGAGCTaGCTGCTGTTCGGAAAAGGGCAAGCTATCTTGGGA +
Preference number: 3 (lower is better)
Translates to: SKYLSVLVAQSS*LLFGKGQAILG
Trigger: TCCCAAGATAGCTTGCCCTTTTCCGAACAGCAGTCAGCTCGACTGTGCCACTAAAACAGACAAATATTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR GCA 72 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTaGCAAACGTGCACTGAGCCAATTAGGATGTTGCTC +
Preference number: 3 (lower is better)
Translates to: NPCIKDKTGWHY*QTCTEPIRMLL
Trigger: GAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
3UTR CCA 72 bp AAGTTTATGAATCCATGCATTAAAGACAAGACAGGCTaGCACTATTGCCAAACGTGCACTGAGCCAATTAGG +
Preference number: 3 (lower is better)
Translates to: KFMNPCIKDKTG*HYCQTCTEPIR
Trigger: CCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATTCATAAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
3UTR GCA 72 bp AACATTAATAGTTCCAACAGTGAACTCCCTGACTGTTaGAAAAGTGAGCAGTTCCCTAGGTACACCAATACT +
Preference number: 3 (lower is better)
Translates to: NINSSNSELPDC*KSEQFPRYTNT
Trigger: AGTATTGGTGTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTCACTGTTGGAACTATTAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR CCA 72 bp CTTGAAAACTGCAGGCTGTACGAAATTTATTCAAATTaGCATAGAAAGACCCCCATCACCACTACCATCTTT +
Preference number: 3 (lower is better)
Translates to: LENCRLYEIYSN*HRKTPITTTIF
Trigger: AAAGATGGTAGTGGTGATGGGGGTCTTTCTATGCCAATTTGAATAAATTTCGTACAGCCTGCAGTTTTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR CAA 90 bp TCATTAAGTGTTACAGCAGGTTCCTCATTCCTTGAACACAACTACTGCAACATGACACAGCTTACAAGCTaGAAACAATATTCCATTGAG +
Preference number: 3 (lower is better)
Translates to: SLSVTAGSSFLEHNYCNMTQLTS*KQYSIE
Trigger: CTCAATGGAATATTGTTTCAAGCTTGTAAGCTGTGT...CATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAACCTGCTGTAACACTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR CAA 90 bp GTTCCTCATTCCTTGAACACAACTACTGCAACATGTTCTAACATTAATAGTTCCTTCCCGAGCAAATATTaGTCTGTTTTAGTGGCACAG +
Preference number: 3 (lower is better)
Translates to: VPHSLNTTTATCSNINSSFPSKY*SVLVAQ
Trigger: CTGTGCCACTAAAACAGACAAATATTTGCTCGGGAA...GGAACTATTAATGTTAGAACATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR-3UTR CAA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTCGTTCTGTTTTTCTTTaGCCATGTATTCTCGTCTTT +
Preference number: 3 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCIRSVFL*PCILVF
Trigger: AAAGACGAGAATACATGGCAAAAGAAAAACAGAACG...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420791.5
ENST00000449480.5
3UTR GCA 72 bp TTTAGGCATAGAAGGTTTAACTTTTCTGCATTCCAGTaGACAGTCATTAAGTGTTACAGCAGGTTCCTCATT +
Preference number: 3 (lower is better)
Translates to: FRHRRFNFSAFQ*TVIKCYSRFLI
Trigger: AATGAGGAACCTGCTGTAACACTTAATGACTGTGCACTGGAATGCAGAAAAGTTAAACCTTCTATGCCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
3UTR GCA 72 bp ACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTaGTCTAAGTTCTTTATACATAATGGTTTCCATGAA +
Preference number: 3 (lower is better)
Translates to: TIAKRALSQLGC*SKFFIHNGFHE
Trigger: TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
3UTR-3UTR CAA 90 bp CAGAAAACTAACAGTTGTCAGACTCAATGTCAAATAATGGAATTTGGGAAAGCACGTTCTGTTTTTCTTTaGCCATGTATTCTCGTCTTT +
Preference number: 3 (lower is better)
Translates to: QKTNSCQTQCQIMEFGKARSVFL*PCILVF
Trigger: AAAGACGAGAATACATGGCAAAAGAAAAACAGAACG...TGCTTTCCCAAATTCCATTATTTGACATTGAGTCTGACAACTGTTAGTTTTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420791.5
ENST00000449480.5
3UTR GCA 72 bp TCAAATACTTTTATGTCATCACAGATTATAGGCAACTaGCTCAGCTATTCAAAAATCTCATCCTGTAGAATC +
Preference number: 3 (lower is better)
Translates to: SNTFMSSQIIGN*LSYSKISSCRI
Trigger: GATTCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATAAAAGTATTTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR TCA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGCACCTGCAGCGCGACTaGGCGCGGGAGGACGCTCTA +
Preference number: 4 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKHLQRD*AREDAL
Trigger: TAGAGCGTCCTCCCGCGCTCAGTCGCGCTGCAGGTG...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367455.8
CDS-3UTR GCA 90 bp AGTTCCAACAGTGAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACCCTCTCGCTCTCAGCTaGCCCCCGCACCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SSNSELPDCCKSEQFPRYPLALS*PPHQLP
Trigger: CGGCAGCTGGTGCGGGGGGCAGCTGAGAGCGAGAGG...GTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTCACTGTTGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCACGGGGTCGCTTTCCATaGGGCACCACTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPRGRFP*GTTPRH
Trigger: ATGCCGGGGAGTGGTGCCTCATGGAAAGCGACCCCG...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAACCACTCCCCGGCATTaGCCGTCATGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPTTPRH*PSWPWP
Trigger: TGGCCAGGGCCATGACGGGCAATGCCGGGGAGTGGT...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp TCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTCCTCTCGCTCTCAGCTaGCCCCCGCACCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SCRISAYSSTAWCSHIFPPLALS*PPHQLP
Trigger: CGGCAGCTGGTGCGGGGGGCAGCTGAGAGCGAGAGG...AGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCGGCATTGCCCGTCATaGCCCTGGCCACACACCGCC +
Preference number: 4 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTERHCPS*PWPHTA
Trigger: GGCGGTGTGTGGCCAGGGCCATGACGGGCAATGCCG...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp AAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGGGCAGGCGGATGGCTTaGGCTCAGGAGTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: KDKTGWHYCQTCTEPIRMGRRMA*AQESET
Trigger: GGTCTCAGACTCCTGAGCTCAAGCCATCCGCCTGCC...CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367450.7
ENST00000367451.8
CDS-3UTR GCA 90 bp GTGCCGCAGCTGTTGGCAAGGTTTTTGTTGATAATAACAGAAGTACATCCCTTACCTCTCGCTCTCAGCTaGCCCCCGCACCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VPQLLARFLLIITEVHPLPLALS*PPHQLP
Trigger: CGGCAGCTGGTGCGGGGGGCAGCTGAGAGCGAGAGG...TAAGGGATGTACTTCTGTTATTATCAACAAAAACCTTGCCAACAGCTGCGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp ATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGACCACTCCCCGGCATTaGCCGTCATGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: IKDKTGWHYCQTCTEPIRTTPRH*PSWPWP
Trigger: TGGCCAGGGCCATGACGGGCAATGCCGGGGAGTGGT...CCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp TCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTACCACTCCCCGGCATTaGCCGTCATGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SCRISAYSSTAWCSHIFPTTPRH*PSWPWP
Trigger: TGGCCAGGGCCATGACGGGCAATGCCGGGGAGTGGT...AGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR TCA 90 bp AAATCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATACGGGGTCGCTTTCCATaGGGCACCACTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: KSHPVESQHIVALHGAAIRGRFP*GTTPRH
Trigger: ATGCCGGGGAGTGGTGCCTCATGGAAAGCGACCCCG...TATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR TCA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTGAGCTCAGGAGTCTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKLSSGV*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAGACTCCTGAGCTCAA...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367450.7
ENST00000367451.8
CDS-3UTR GCA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATCCTCTCGCTCTCAGCTaGCCCCCGCACCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHPLALS*PPHQLP
Trigger: CGGCAGCTGGTGCGGGGGGCAGCTGAGAGCGAGAGG...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp GTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTACCACTCCCCGGCATTaGCCGTCATGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VESQHIVALHGAAISFLFTTPRH*PSWPWP
Trigger: TGGCCAGGGCCATGACGGGCAATGCCGGGGAGTGGT...AAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR GCA 90 bp AAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTGGTGAGAGTAGCCAGTaGCGCAGCTGTTGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: KTRQAGTIAKRALSQLGCGESSQ*RSCWQG
Trigger: ACCTTGCCAACAGCTGCGGCACTGGCTACTCTCACC...ACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp AGGTCAAATACTTTTATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCACCTCTCGCTCTCAGCTaGCCCCCGCACCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RSNTFMSSQIIGNCLSYSPLALS*PPHQLP
Trigger: CGGCAGCTGGTGCGGGGGGCAGCTGAGAGCGAGAGG...TGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATAAAAGTATTTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR GCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCACACAGTCGAGCTGACTaGTGTTCGGAAAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPHSRAD*CSEKGK
Trigger: CTTGCCCTTTTCCGAACAGCAGTCAGCTCGACTGTG...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp TATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGCGGCATTGCCCGTCATaGCCCTGGCCACACACCGCC +
Preference number: 4 (lower is better)
Translates to: YVITDYRQLPQLFKNLILRHCPS*PWPHTA
Trigger: GGCGGTGTGTGGCCAGGGCCATGACGGGCAATGCCG...CAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATCGGCATTGCCCGTCATaGCCCTGGCCACACACCGCC +
Preference number: 4 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHRHCPS*PWPHTA
Trigger: GGCGGTGTGTGGCCAGGGCCATGACGGGCAATGCCG...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp ACATTTATAGGTTCTAACCAAGTTCATTATAGCCATGCCGAGGGAGAATCACTTCGGGGTCGCTTTCCATaGGGCACCACTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: TFIGSNQVHYSHAEGESLRGRFP*GTTPRH
Trigger: ATGCCGGGGAGTGGTGCCTCATGGAAAGCGACCCCG...AAGTGATTCTCCCTCGGCATGGCTATAATGAACTTGGTTAGAACCTATAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR TCA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATCGGGGTCGCTTTCCATaGGGCACCACTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHRGRFP*GTTPRH
Trigger: ATGCCGGGGAGTGGTGCCTCATGGAAAGCGACCCCG...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCGGGGTCGCTTTCCATaGGGCACCACTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: RALSQLGCCSKFFIHNGFRGRFP*GTTPRH
Trigger: ATGCCGGGGAGTGGTGCCTCATGGAAAGCGACCCCG...GAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATGGCAGGCGGATGGCTTaGGCTCAGGAGTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: YALHAHDAGREEVYESMHGRRMA*AQESET
Trigger: GGTCTCAGACTCCTGAGCTCAAGCCATCCGCCTGCC...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367450.7
ENST00000367451.8
CDS-3UTR TCA 90 bp GGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTGTGGCACAGTCGAGCTaGCTGCTGTTCGGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: GTIAKRALSQLGCCSKFFVAQSS*LLFGKG
Trigger: CCCTTTTCCGAACAGCAGTCAGCTCGACTGTGCCAC...AAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAAACAGGCTGGCACTATTaGCAAACGTGCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: HALKTRQAGTIAKRALSQTGWHY*QTCTEP
Trigger: TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGT...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR CCA 90 bp AGGTCAAATACTTTTATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCACGGCATTGCCCGTCATaGCCCTGGCCACACACCGCC +
Preference number: 4 (lower is better)
Translates to: RSNTFMSSQIIGNCLSYSRHCPS*PWPHTA
Trigger: GGCGGTGTGTGGCCAGGGCCATGACGGGCAATGCCG...TGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATAAAAGTATTTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp GGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTTACCATGGTCCTAACTaGGGGAGCAAGTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GTIAKRALSQLGCCSKFFYHGPN*GSKSPW
Trigger: CCACGGGGACTTGCTCCCCCAGTTAGGACCATGGTA...AAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCATTGTCGAATCACATCTaGATTGCTCAGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPLSNHI*IAQCQA
Trigger: GGCTTGGCACTGAGCAATTCAGATGTGATTCGACAA...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR TCA 90 bp AAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCCAGGCCTTACTGCACTaGTCCAATCATCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: KTGWHYCQTCTEPIRMLLQALLH*SNHLDC
Trigger: GCAATCAAGATGATTGGATCAGTGCAGTAAGGCCTG...GAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp AAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTACCACTCCCCGGCATTaGCCGTCATGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KRALSQLGCCSKFFIHNGTTPRH*PSWPWP
Trigger: TGGCCAGGGCCATGACGGGCAATGCCGGGGAGTGGT...ACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp GCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAACAGGCTGGCACTATTaGCAAACGTGCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ALKTRQAGTIAKRALSQLTGWHY*QTCTEP
Trigger: TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGT...TAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp AAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTTGGATGGGAGTAATCGGTGAGAGTAGCCAGTaGCGCAGCTGTTGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: KVSSSLGTPILYVWMGVIGESSQ*RSCWQG
Trigger: ACCTTGCCAACAGCTGCGGCACTGGCTACTCTCACC...GATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAACGGCATTGCCCGTCATaGCCCTGGCCACACACCGCC +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHERHCPS*PWPHTA
Trigger: GGCGGTGTGTGGCCAGGGCCATGACGGGCAATGCCG...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAAAAGACAAGACAGGCTaGCACTATTGCCAAACGTGC +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPKDKTG*HYCQTC
Trigger: GCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR CCA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGAAAGACAAGACAGGCTaGCACTATTGCCAAACGTGC +
Preference number: 4 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKKDKTG*HYCQTC
Trigger: GCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTGTCGAATCACATCTaGATTGCTCAGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: HALKTRQAGTIAKRALSQLSNHI*IAQCQA
Trigger: GGCTTGGCACTGAGCAATTCAGATGTGATTCGACAA...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAAACCACTCCCCGGCATTaGCCGTCATGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHETTPRH*PSWPWP
Trigger: TGGCCAGGGCCATGACGGGCAATGCCGGGGAGTGGT...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCACACTATTGCCAAACGTaGACTGAGCCAATTAGGATG +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPHYCQT*TEPIRM
Trigger: CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTG...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR CCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCATGCTGGTTCTTCTCCTaGCTGCCACTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPCWFFS*LPLEKK
Trigger: TTTCTTTTCAAGTGGCAGCCAGGAGAAGAACCAGCA...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGCTTGATCTGTATCCATaGGTTCCTCTGCAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKLDLYP*VPLQVV
Trigger: GACAACTTGCAGAGGAACCCATGGATACAGATCAAG...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367451.8
ENST00000367454.6
ENST00000449480.5
CDS-3UTR CCA 90 bp AAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCGCTGAAGCTGGAAGATaGGTACACATTCTCCCTAAT +
Preference number: 4 (lower is better)
Translates to: KTGWHYCQTCTEPIRMLLAEAGR*VHILPN
Trigger: ATTAGGGAGAATGTGTACCCATCTTCCAGCTTCAGC...GAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTTTGAGCTCAGGAGTCTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCILSSGV*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAGACTCCTGAGCTCAA...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367450.7
ENST00000367451.8
CDS-3UTR TCA 90 bp TTTGTCTGTTTTAGTGGCACAGTCGAGCTGACTGCTGTTCGGAAAAGGGCAAGCCTTCATTTGGTTTCCTaGGCTTTCTTTGCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: FVCFSGTVELTAVRKRASLHLVS*AFFAFC
Trigger: ACAGAACGCAAAGAAAGCTCAGGAAACCAAATGAAG...GCTTGCCCTTTTCCGAACAGCAGTCAGCTCGACTGTGCCACTAAAACAGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCACTTCATTTGGTTTCCTaGGCTTTCTTTGCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPLHLVS*AFFAFC
Trigger: ACAGAACGCAAAGAAAGCTCAGGAAACCAAATGAAG...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp AGTTCCAACAGTGAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACGGTTACTGCTTTCTGTaGCCTAAGAAACCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSNSELPDCCKSEQFPRYGYCFL*PKKPLA
Trigger: AGCCAAAGGTTTCTTAGGTCACAGAAAGCAGTAACC...GTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTCACTGTTGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGGAATCACATCTGAATTaGTCAGTGCCAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKESHLN*SVPSLS
Trigger: TGAAAGGCTTGGCACTGAGCAATTCAGATGTGATTC...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp AAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTATGACAGGCCTTACTaGACTGATCCAATCATCTTG +
Preference number: 4 (lower is better)
Translates to: KTGWHYCQTCTEPIRMLLYDRPY*TDPIIL
Trigger: CAAGATGATTGGATCAGTGCAGTAAGGCCTGTCATA...GAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CCA 90 bp AAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTGCTGGTTCTTCTCCTaGCTGCCACTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: KDKTGWHYCQTCTEPIRMCWFFS*LPLEKK
Trigger: TTTCTTTTCAAGTGGCAGCCAGGAGAAGAACCAGCA...CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGAAATGGACATCCTGGTaGGTACAGTTCAGTAACACA +
Preference number: 4 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKKWTSW*VQFSNT
Trigger: TGTGTTACTGAACTGTACCCACCAGGATGTCCATTT...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGAATGTCTCGCCTAAATaGACATCCTGGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTENVSPK*TSWWVQ
Trigger: CTGTACCCACCAGGATGTCCATTTAGGCGAGACATT...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAACTTGATCTGTATCCATaGGTTCCTCTGCAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: HALKTRQAGTIAKRALSQLDLYP*VPLQVV
Trigger: GACAACTTGCAGAGGAACCCATGGATACAGATCAAG...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367451.8
ENST00000367454.6
ENST00000449480.5
CDS-3UTR TCA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGCTGATCCAATCATCTTaGTTGCATGCACCTAAATCA +
Preference number: 4 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKLIQSS*LHAPKS
Trigger: TGATTTAGGTGCATGCAATCAAGATGATTGGATCAG...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR TCA 90 bp ATCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCCAGGCCTTACTGCACTaGTCCAATCATCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: ISSCRISAYSSTAWCSHIQALLH*SNHLDC
Trigger: GCAATCAAGATGATTGGATCAGTGCAGTAAGGCCTG...GATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR TCA 90 bp TCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTCAGGCCTTACTGCACTaGTCCAATCATCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: SCRISAYSSTAWCSHIFPQALLH*SNHLDC
Trigger: GCAATCAAGATGATTGGATCAGTGCAGTAAGGCCTG...AGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR TCA 90 bp AAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCAACATACTATTACCTTaGTCTGTATCCATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KTGWHYCQTCTEPIRMLLNILLP*SVSMGS
Trigger: GGAACCCATGGATACAGATCAAGGTAATAGTATGTT...GAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGAACATACTATTACCTTaGTCTGTATCCATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKNILLP*SVSMGS
Trigger: GGAACCCATGGATACAGATCAAGGTAATAGTATGTT...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAAACATACTATTACCTTaGTCTGTATCCATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPNILLP*SVSMGS
Trigger: GGAACCCATGGATACAGATCAAGGTAATAGTATGTT...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp AGTTCCAACAGTGAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACCTTCATTTGGTTTCCTaGGCTTTCTTTGCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSNSELPDCCKSEQFPRYLHLVS*AFFAFC
Trigger: ACAGAACGCAAAGAAAGCTCAGGAAACCAAATGAAG...GTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTCACTGTTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp AAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGCTTCATTTGGTTTCCTaGGCTTTCTTTGCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: KDKTGWHYCQTCTEPIRMLHLVS*AFFAFC
Trigger: ACAGAACGCAAAGAAAGCTCAGGAAACCAAATGAAG...CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp AAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTCCTTAAAAATGTGCTaGAGCTGGAAGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: KDKTGWHYCQTCTEPIRMSLKMC*SWKMGT
Trigger: TGTACCCATCTTCCAGCTTCAGCACATTTTTAAGGA...CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp GTTCCTCATTCCTTGAACACAACTACTGCAACATGTTCTAACATTAATAGTTCCGTGGCACAGTCGAGCTaGCTGCTGTTCGGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: VPHSLNTTTATCSNINSSVAQSS*LLFGKG
Trigger: CCCTTTTCCGAACAGCAGTCAGCTCGACTGTGCCAC...GGAACTATTAATGTTAGAACATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAGGTTCTTCTCCTGGCTaGCACTTGAAAAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPGSSPG*HLKRKI
Trigger: AATTTTTCTTTTCAAGTGGCAGCCAGGAGAAGAACC...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp AAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTGAATCACATCTGAATTaGTCAGTGCCAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KTRQAGTIAKRALSQLGCESHLN*SVPSLS
Trigger: TGAAAGGCTTGGCACTGAGCAATTCAGATGTGATTC...ACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp AAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTATGACAGGCCTTACTaGACTGATCCAATCATCTTG +
Preference number: 4 (lower is better)
Translates to: KTRQAGTIAKRALSQLGCYDRPY*TDPIIL
Trigger: CAAGATGATTGGATCAGTGCAGTAAGGCCTGTCATA...ACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAACTAGTGGTATTAACTaGTGGTGTTCTGCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPTSGIN*WCSAKV
Trigger: GACTTTAGCAGAACACCAGCAGTTAATACCACTAGT...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCACTATTGCCAAACGTaGACTGAGCCAATTAGGATG +
Preference number: 4 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTEHYCQT*TEPIRM
Trigger: CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTG...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTACAGGCTGGCACTATTaGCAAACGTGCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCITGWHY*QTCTEP
Trigger: TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGT...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATACAGGCTGGCACTATTaGCAAACGTGCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: YALHAHDAGREEVYESMHTGWHY*QTCTEP
Trigger: TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGT...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp GTTGTATTACATACTTATTATCTGTCTCACCATGAGAGCAGGGGCTTTTTCCTGCACAGTCGAGCTGACTaGTGTTCGGAAAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VVLHTYYLSHHESRGFFLHSRAD*CSEKGK
Trigger: CTTGCCCTTTTCCGAACAGCAGTCAGCTCGACTGTG...CAGGAAAAAGCCCCTGCTCTCATGGTGAGACAGATAATAAGTATGTAATACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp ATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGCATATTTCTTCTACTTaGGCTCCTCGGCAACCGAAT +
Preference number: 4 (lower is better)
Translates to: IKDKTGWHYCQTCTEPIRHISST*APRQPN
Trigger: ATTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATG...CCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCATATTTCTTCTACTTaGGCTCCTCGGCAACCGAAT +
Preference number: 4 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTEHISST*APRQPN
Trigger: ATTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATG...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGTGCTGGTTCTTCTCCTaGCTGCCACTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTECWFFS*LPLEKK
Trigger: TTTCTTTTCAAGTGGCAGCCAGGAGAAGAACCAGCA...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp ATCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCAATGTCTCGCCTAAATaGACATCCTGGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: ISSCRISAYSSTAWCSHINVSPK*TSWWVQ
Trigger: CTGTACCCACCAGGATGTCCATTTAGGCGAGACATT...GATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp CTTTATTCACAGACAGAAGTAATCATGAAGTATCACAAGGGATTTGCAATCACCTACCATGGTCCTAACTaGGGGAGCAAGTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LYSQTEVIMKYHKGFAITYHGPN*GSKSPW
Trigger: CCACGGGGACTTGCTCCCCCAGTTAGGACCATGGTA...GGTGATTGCAAATCCCTTGTGATACTTCATGATTACTTCTGTCTGTGAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp ATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCAACTATTTCAGACTATaGGGAGGGCAAGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: IHALKTRQAGTIAKRALSNYFRL*GGQARL
Trigger: TAGTCTTGCTTGCCCTCCCCATAGTCTGAAATAGTT...GCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp AGTTCCAACAGTGAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACAACTATTTCAGACTATaGGGAGGGCAAGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: SSNSELPDCCKSEQFPRYNYFRL*GGQARL
Trigger: TAGTCTTGCTTGCCCTCCCCATAGTCTGAAATAGTT...GTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTCACTGTTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGCCAATACTGTATGTTTaGATGGGAGTAATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKPILYV*MGVISG
Trigger: TCCAGAGATTACTCCCATCCAAACATACAGTATTGG...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp GAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTGTTTTGTCGAATCACATCTaGATTGCTCAGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ESQHIVALHGAAISFLFVLSNHI*IAQCQA
Trigger: GGCTTGGCACTGAGCAATTCAGATGTGATTCGACAA...AACAAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR TCA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTGGCAACTTCTGACTaGATAGCACTTAACATACTA +
Preference number: 4 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKLATSD*IALNIL
Trigger: TAGTATGTTAAGTGCTATTCAGTCAGAAGTTGCCAA...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp AAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCCACAGCTTACAAGCTTaGAACAATATTCCATTGAGA +
Preference number: 4 (lower is better)
Translates to: KTGWHYCQTCTEPIRMLLHSLQA*NNIPLR
Trigger: TCTCAATGGAATATTGTTTCAAGCTTGTAAGCTGTG...GAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp GAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATCTGGCTCCATTTGTTaGAAAGACTTTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ELPDCCKSEQFPRYTNTVSGSIC*KDFPSL
Trigger: CAGAGAAGGAAAGTCTTTTCAACAAATGGAGCCAGA...TACAGTATTGGTGTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp GCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTATCAAAGTCATTTTTGTaGGGTAGGGGGTCATTGTTC +
Preference number: 4 (lower is better)
Translates to: ALKTRQAGTIAKRALSQLSKSFL*GRGSLF
Trigger: GAACAATGACCCCCTACCTCACAAAAATGACTTTGA...TAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAAGGTTCTTCTCCTGGCTaGCACTTGAAAAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: HALKTRQAGTIAKRALSQGSSPG*HLKRKI
Trigger: AATTTTTCTTTTCAAGTGGCAGCCAGGAGAAGAACC...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGTATGACAGGCCTTACTaGACTGATCCAATCATCTTG +
Preference number: 4 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTEYDRPY*TDPIIL
Trigger: CAAGATGATTGGATCAGTGCAGTAAGGCCTGTCATA...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAAACTAGTGGTATTAACTaGTGGTGTTCTGCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: HALKTRQAGTIAKRALSQTSGIN*WCSAKV
Trigger: GACTTTAGCAGAACACCAGCAGTTAATACCACTAGT...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp ATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCACTAGTGGTATTAACTaGTGGTGTTCTGCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: IHALKTRQAGTIAKRALSTSGIN*WCSAKV
Trigger: GACTTTAGCAGAACACCAGCAGTTAATACCACTAGT...GCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATACAGGCTGGCACTATTaGCAAACGTGCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHTGWHY*QTCTEP
Trigger: TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGT...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp TCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTAGTAGCACTGCATGGTaGAGCCATATCTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SHPVESQHIVALHGAAISSSTAW*SHIFPV
Trigger: AACAGGAAAGATATGGCTGCACCATGCAGTGCTACT...AGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR CCA 90 bp GCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAAAATGGACATCCTGGTaGGTACAGTTCAGTAACACA +
Preference number: 4 (lower is better)
Translates to: ALKTRQAGTIAKRALSQLKWTSW*VQFSNT
Trigger: TGTGTTACTGAACTGTACCCACCAGGATGTCCATTT...TAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp GTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTAATGTCTCGCCTAAATaGACATCCTGGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: VESQHIVALHGAAISFLFNVSPK*TSWWVQ
Trigger: CTGTACCCACCAGGATGTCCATTTAGGCGAGACATT...AAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAACAAACATTTGCTGTCTaGCGAAACTGTTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: HALKTRQAGTIAKRALSQQTFAV*RNCCVL
Trigger: AAGTACACAACAGTTTCGCCAGACAGCAAATGTTTG...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAAGTGGTATTAACTGCTaGTGTTCTGCTAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPSGINC*CSAKVF
Trigger: AAAGACTTTAGCAGAACACCAGCAGTTAATACCACT...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp TCATTAAGTGTTACAGCAGGTTCCTCATTCCTTGAACACAACTACTGCAACATGAAGTCCCCGTGGTTGTaGTTCCCGAGCAAATATTTG +
Preference number: 4 (lower is better)
Translates to: SLSVTAGSSFLEHNYCNMKSPWL*FPSKYL
Trigger: CAAATATTTGCTCGGGAATCACAACCACGGGGACTT...CATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAACCTGCTGTAACACTTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp AGGTTTAACTTTTCTGCATTCCAGTGCACAGTCATTAAGTGTTACAGCAGGTTCAAGTCCCCGTGGTTGTaGTTCCCGAGCAAATATTTG +
Preference number: 4 (lower is better)
Translates to: RFNFSAFQCTVIKCYSRFKSPWL*FPSKYL
Trigger: CAAATATTTGCTCGGGAATCACAACCACGGGGACTT...GAACCTGCTGTAACACTTAATGACTGTGCACTGGAATGCAGAAAAGTTAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp GCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGTTCTTCTCCTGGCTaGCACTTGAAAAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: ALKTRQAGTIAKRALSQLGSSPG*HLKRKI
Trigger: AATTTTTCTTTTCAAGTGGCAGCCAGGAGAAGAACC...TAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp ATCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTATGACAGGCCTTACTaGACTGATCCAATCATCTTG +
Preference number: 4 (lower is better)
Translates to: ISSCRISAYSSTAWCSHIYDRPY*TDPIIL
Trigger: CAAGATGATTGGATCAGTGCAGTAAGGCCTGTCATA...GATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp CATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCTATGACAGGCCTTACTaGACTGATCCAATCATCTTG +
Preference number: 4 (lower is better)
Translates to: HPVESQHIVALHGAAISFYDRPY*TDPIIL
Trigger: CAAGATGATTGGATCAGTGCAGTAAGGCCTGTCATA...GAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp ATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGACTAGTGGTATTAACTaGTGGTGTTCTGCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: IKDKTGWHYCQTCTEPIRTSGIN*WCSAKV
Trigger: GACTTTAGCAGAACACCAGCAGTTAATACCACTAGT...CCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTGAACTCCCTGACTGTTaGAAAAGTGAGCAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCIELPDC*KSEQFP
Trigger: AGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTC...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAAGTACTAGAGAAGTTCTaGCTATATGCCTATATGCAA +
Preference number: 4 (lower is better)
Translates to: HALKTRQAGTIAKRALSQVLEKF*LYAYMQ
Trigger: TTGCATATAGGCATATAGGCAGAACTTCTCTAGTAC...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp GTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTTGCTGGTTCTTCTCCTaGCTGCCACTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: VESQHIVALHGAAISFLFCWFFS*LPLEKK
Trigger: TTTCTTTTCAAGTGGCAGCCAGGAGAAGAACCAGCA...AAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp GGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTAAATGGACATCCTGGTaGGTACAGTTCAGTAACACA +
Preference number: 4 (lower is better)
Translates to: GTIAKRALSQLGCCSKFFKWTSW*VQFSNT
Trigger: TGTGTTACTGAACTGTACCCACCAGGATGTCCATTT...AAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCAAACATTTGCTGTCTaGCGAAACTGTTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTEQTFAV*RNCCVL
Trigger: AAGTACACAACAGTTTCGCCAGACAGCAAATGTTTG...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CCA 90 bp GCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTACAAACATTTGCTGTCTaGCGAAACTGTTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: ALKTRQAGTIAKRALSQLQTFAV*RNCCVL
Trigger: AAGTACACAACAGTTTCGCCAGACAGCAAATGTTTG...TAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CCA 90 bp GTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTCTTGATCTGTATCCATaGGTTCCTCTGCAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: VESQHIVALHGAAISFLFLDLYP*VPLQVV
Trigger: GACAACTTGCAGAGGAACCCATGGATACAGATCAAG...AAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp AAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGAGTGGTATTAACTGCTaGTGTTCTGCTAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: KDKTGWHYCQTCTEPIRMSGINC*CSAKVF
Trigger: AAAGACTTTAGCAGAACACCAGCAGTTAATACCACT...CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR CCA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATAAAGACAAGACAGGCTaGCACTATTGCCAAACGTGC +
Preference number: 4 (lower is better)
Translates to: YALHAHDAGREEVYESMHKDKTG*HYCQTC
Trigger: GCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR CCA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAAGACAAGACAGGCTaGCACTATTGCCAAACGTGC +
Preference number: 4 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCIKDKTG*HYCQTC
Trigger: GCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR CCA 90 bp AAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCGAAATTTATTCAAATTaGCATAGAAAGACCCCCATC +
Preference number: 4 (lower is better)
Translates to: KTGWHYCQTCTEPIRMLLEIYSN*HRKTPI
Trigger: GATGGGGGTCTTTCTATGCCAATTTGAATAAATTTC...GAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp CCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCATCAGCTATTCTATTCTaGCTCCATTTGTTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PCIKDKTGWHYCQTCTEPSAILF*LHLLKR
Trigger: TCTTTTCAACAAATGGAGCCAGAATAGAATAGCTGA...TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp TTTGTCTGTTTTAGTGGCACAGTCGAGCTGACTGCTGTTCGGAAAAGGGCAAGCATTTTGGATCTTTTATaGTTACTGCTTTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: FVCFSGTVELTAVRKRASILDLL*LLLSVT
Trigger: GGTCACAGAAAGCAGTAACCATAAAAGATCCAAAAT...GCTTGCCCTTTTCCGAACAGCAGTCAGCTCGACTGTGCCACTAAAACAGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCACACTCACTATGGCTTaGGTAGCACAAGCATTATTA +
Preference number: 4 (lower is better)
Translates to: HPVESQHIVALHGAAISFTLTMA*VAQALL
Trigger: TAATAATGCTTGTGCTACTCAAGCCATAGTGAGTGT...GAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR TCA 90 bp ACATTTATAGGTTCTAACCAAGTTCATTATAGCCATGCCGAGGGAGAATCACTTTTGTCGAATCACATCTaGATTGCTCAGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: TFIGSNQVHYSHAEGESLLSNHI*IAQCQA
Trigger: GGCTTGGCACTGAGCAATTCAGATGTGATTCGACAA...AAGTGATTCTCCCTCGGCATGGCTATAATGAACTTGGTTAGAACCTATAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR TCA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATTTGTCGAATCACATCTaGATTGCTCAGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHLSNHI*IAQCQA
Trigger: GGCTTGGCACTGAGCAATTCAGATGTGATTCGACAA...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR TCA 90 bp TCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTCTGATCCAATCATCTTaGTTGCATGCACCTAAATCA +
Preference number: 4 (lower is better)
Translates to: SCRISAYSSTAWCSHIFPLIQSS*LHAPKS
Trigger: TGATTTAGGTGCATGCAATCAAGATGATTGGATCAG...AGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR TCA 90 bp CGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCAGGCCTTACTGCACTaGTCCAATCATCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: RALSQLGCCSKFFIHNGFQALLH*SNHLDC
Trigger: GCAATCAAGATGATTGGATCAGTGCAGTAAGGCCTG...GAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR TCA 90 bp TCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGAATCCAGGCCTTACTGCACTaGTCCAATCATCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: SQIIGNCLSYSKISSCRIQALLH*SNHLDC
Trigger: GCAATCAAGATGATTGGATCAGTGCAGTAAGGCCTG...GATTCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR TCA 90 bp ATCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCAACATACTATTACCTTaGTCTGTATCCATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: ISSCRISAYSSTAWCSHINILLP*SVSMGS
Trigger: GGAACCCATGGATACAGATCAAGGTAATAGTATGTT...GATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR TCA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCACAGCTTACAAGCTTaGAACAATATTCCATTGAGA +
Preference number: 4 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTEHSLQA*NNIPLR
Trigger: TCTCAATGGAATATTGTTTCAAGCTTGTAAGCTGTG...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp AAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTTGGATGGGAGTAATCTCCTTAAAAATGTGCTaGAGCTGGAAGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: KVSSSLGTPILYVWMGVISLKMC*SWKMGT
Trigger: TGTACCCATCTTCCAGCTTCAGCACATTTTTAAGGA...GATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp GTGCCGCAGCTGTTGGCAAGGTTTTTGTTGATAATAACAGAAGTACATCCCTTAGCTGAAATAAACGAATaGGATCAAGATGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: VPQLLARFLLIITEVHPLAEINE*DQDEPS
Trigger: GGAAGGCTCATCTTGATCTCATTCGTTTATTTCAGC...TAAGGGATGTACTTCTGTTATTATCAACAAAAACCTTGCCAACAGCTGCGGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp GGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTTACCCTCTAGCTTCATaGCTTAATTTCAAACCAGCA +
Preference number: 4 (lower is better)
Translates to: GTIAKRALSQLGCCSKFFYPLAS*LNFKPA
Trigger: TGCTGGTTTGAAATTAAGTCATGAAGCTAGAGGGTA...AAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp TCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTGGTTCTTCTCCTGGCTaGCACTTGAAAAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: SHPVESQHIVALHGAAISGSSPG*HLKRKI
Trigger: AATTTTTCTTTTCAAGTGGCAGCCAGGAGAAGAACC...AGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR GCA 90 bp GTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTGAATCACATCTGAATTaGTCAGTGCCAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: VESQHIVALHGAAISFLFESHLN*SVPSLS
Trigger: TGAAAGGCTTGGCACTGAGCAATTCAGATGTGATTC...AAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR GCA 90 bp ATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGTCAAATTCAAACATTTaGTGTCTGGCGAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: IKDKTGWHYCQTCTEPIRSNSNI*CLAKLL
Trigger: CAACAGTTTCGCCAGACAGCAAATGTTTGAATTTGA...CCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGTCCAATCATCTTGATTaGATGCACCTAAATCAATCG +
Preference number: 4 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTESNHLD*MHLNQS
Trigger: CGATTGATTTAGGTGCATGCAATCAAGATGATTGGA...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp TCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTACTAGTGGTATTAACTaGTGGTGTTCTGCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: SCRISAYSSTAWCSHIFPTSGIN*WCSAKV
Trigger: GACTTTAGCAGAACACCAGCAGTTAATACCACTAGT...AGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATCACTATTGCCAAACGTaGACTGAGCCAATTAGGATG +
Preference number: 4 (lower is better)
Translates to: YALHAHDAGREEVYESMHHYCQT*TEPIRM
Trigger: CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTG...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAAACAGGCTGGCACTATTaGCAAACGTGCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHETGWHY*QTCTEP
Trigger: TGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGT...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp GCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAATGGCTCTTGAAAACTaGAGGCTGTACGAAATTTAT +
Preference number: 4 (lower is better)
Translates to: ALKTRQAGTIAKRALSQLMALEN*RLYEIY
Trigger: ATAAATTTCGTACAGCCTGCAGTTTTCAAGAGCCAT...TAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp ATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGTTTTCTGCATTCCAGTaGACAGTCATTAAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: IKDKTGWHYCQTCTEPIRFSAFQ*TVIKCY
Trigger: GTAACACTTAATGACTGTGCACTGGAATGCAGAAAA...CCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp GTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTAAATGGACATCCTGGTaGGTACAGTTCAGTAACACA +
Preference number: 4 (lower is better)
Translates to: VESQHIVALHGAAISFLFKWTSW*VQFSNT
Trigger: TGTGTTACTGAACTGTACCCACCAGGATGTCCATTT...AAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp CACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAAAATGTCTCGCCTAAATaGACATCCTGGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: HYMHMMQVGKKFMNPCIKNVSPK*TSWWVQ
Trigger: CTGTACCCACCAGGATGTCCATTTAGGCGAGACATT...TTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp CGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCAATGTCTCGCCTAAATaGACATCCTGGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: RALSQLGCCSKFFIHNGFNVSPK*TSWWVQ
Trigger: CTGTACCCACCAGGATGTCCATTTAGGCGAGACATT...GAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp ATCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCCAAACATTTGCTGTCTaGCGAAACTGTTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: ISSCRISAYSSTAWCSHIQTFAV*RNCCVL
Trigger: AAGTACACAACAGTTTCGCCAGACAGCAAATGTTTG...GATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp GGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTCAAACATTTGCTGTCTaGCGAAACTGTTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: GTIAKRALSQLGCCSKFFQTFAV*RNCCVL
Trigger: AAGTACACAACAGTTTCGCCAGACAGCAAATGTTTG...AAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CCA 90 bp GCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAAGTGGTATTAACTGCTaGTGTTCTGCTAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: ALKTRQAGTIAKRALSQLSGINC*CSAKVF
Trigger: AAAGACTTTAGCAGAACACCAGCAGTTAATACCACT...TAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR CCA 90 bp ATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGAGTGGTATTAACTGCTaGTGTTCTGCTAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: IKDKTGWHYCQTCTEPIRSGINC*CSAKVF
Trigger: AAAGACTTTAGCAGAACACCAGCAGTTAATACCACT...CCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR CCA 90 bp TACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAAGACAAAGACAAGACAGGCTaGCACTATTGCCAAACGTGC +
Preference number: 4 (lower is better)
Translates to: YMHMMQVGKKFMNPCIKDKDKTG*HYCQTC
Trigger: GCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT...GTCTTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp ACGAAATTTATTCAAATTGGCATAGAAAGACCCCCATCACCACTACCATCTTTTTTGTCGAATCACATCTaGATTGCTCAGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: TKFIQIGIERPPSPLPSFLSNHI*IAQCQA
Trigger: GGCTTGGCACTGAGCAATTCAGATGTGATTCGACAA...AAAAGATGGTAGTGGTGATGGGGGTCTTTCTATGCCAATTTGAATAAATTTCGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp AAATCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATACTGATCCAATCATCTTaGTTGCATGCACCTAAATCA +
Preference number: 4 (lower is better)
Translates to: KSHPVESQHIVALHGAAILIQSS*LHAPKS
Trigger: TGATTTAGGTGCATGCAATCAAGATGATTGGATCAG...TATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR TCA 90 bp ACGAAATTTATTCAAATTGGCATAGAAAGACCCCCATCACCACTACCATCTTTTCAGGCCTTACTGCACTaGTCCAATCATCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: TKFIQIGIERPPSPLPSFQALLH*SNHLDC
Trigger: GCAATCAAGATGATTGGATCAGTGCAGTAAGGCCTG...AAAAGATGGTAGTGGTGATGGGGGTCTTTCTATGCCAATTTGAATAAATTTCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp GAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTGTTAACATACTATTACCTTaGTCTGTATCCATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: ESQHIVALHGAAISFLFVNILLP*SVSMGS
Trigger: GGAACCCATGGATACAGATCAAGGTAATAGTATGTT...AACAAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR TCA 90 bp ATCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTGGCAACTTCTGACTaGATAGCACTTAACATACTA +
Preference number: 4 (lower is better)
Translates to: ISSCRISAYSSTAWCSHILATSD*IALNIL
Trigger: TAGTATGTTAAGTGCTATTCAGTCAGAAGTTGCCAA...GATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp ATCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTCAAATTCAAACATTTaGTGTCTGGCGAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: ISSCRISAYSSTAWCSHISNSNI*CLAKLL
Trigger: CAACAGTTTCGCCAGACAGCAAATGTTTGAATTTGA...GATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR GCA 90 bp TCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTTCCAATCATCTTGATTaGATGCACCTAAATCAATCG +
Preference number: 4 (lower is better)
Translates to: SCRISAYSSTAWCSHIFPSNHLD*MHLNQS
Trigger: CGATTGATTTAGGTGCATGCAATCAAGATGATTGGA...AGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp GGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTTCCAATCATCTTGATTaGATGCACCTAAATCAATCG +
Preference number: 4 (lower is better)
Translates to: GTIAKRALSQLGCCSKFFSNHLD*MHLNQS
Trigger: CGATTGATTTAGGTGCATGCAATCAAGATGATTGGA...AAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp GAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTGTTACTAGTGGTATTAACTaGTGGTGTTCTGCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: ESQHIVALHGAAISFLFVTSGIN*WCSAKV
Trigger: GACTTTAGCAGAACACCAGCAGTTAATACCACTAGT...AACAAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp CGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCACTATTGCCAAACGTaGACTGAGCCAATTAGGATG +
Preference number: 4 (lower is better)
Translates to: RALSQLGCCSKFFIHNGFHYCQT*TEPIRM
Trigger: CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTG...GAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp TCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGAATCAGTAGCACTGCATGGTaGAGCCATATCTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SQIIGNCLSYSKISSCRISSTAW*SHIFPV
Trigger: AACAGGAAAGATATGGCTGCACCATGCAGTGCTACT...GATTCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp TCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTCAGATTATAGGCAACTaGCTCAGCTATTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: SCRISAYSSTAWCSHIFPQIIGN*LSYSKI
Trigger: GATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTG...AGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp GAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATCTGTTGAATTGTTTTaGCACCTTTGTCGAAATCAA +
Preference number: 4 (lower is better)
Translates to: ELPDCCKSEQFPRYTNTVSVELF*HLCRNQ
Trigger: TTGATTTCGACAAAGGTGGCAAAACAATTCAACAGA...TACAGTATTGGTGTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp CTTTATTCACAGACAGAAGTAATCATGAAGTATCACAAGGGATTTGCAATCACCGAACTCCCTGACTGTTaGAAAAGTGAGCAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LYSQTEVIMKYHKGFAITELPDC*KSEQFP
Trigger: AGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTC...GGTGATTGCAAATCCCTTGTGATACTTCATGATTACTTCTGTCTGTGAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp ACATTTATAGGTTCTAACCAAGTTCATTATAGCCATGCCGAGGGAGAATCACTTCATATTTCTTCTACTTaGGCTCCTCGGCAACCGAAT +
Preference number: 4 (lower is better)
Translates to: TFIGSNQVHYSHAEGESLHISST*APRQPN
Trigger: ATTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATG...AAGTGATTCTCCCTCGGCATGGCTATAATGAACTTGGTTAGAACCTATAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp TATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGCATATTTCTTCTACTTaGGCTCCTCGGCAACCGAAT +
Preference number: 4 (lower is better)
Translates to: YVITDYRQLPQLFKNLILHISST*APRQPN
Trigger: ATTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATG...CAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp TCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGAATCTGCTGGTTCTTCTCCTaGCTGCCACTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SQIIGNCLSYSKISSCRICWFFS*LPLEKK
Trigger: TTTCTTTTCAAGTGGCAGCCAGGAGAAGAACCAGCA...GATTCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp CGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCTTGATCTGTATCCATaGGTTCCTCCTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: RALSQLGCCSKFFIHNGFLDLYP*VPPLQV
Trigger: AACTTGCAGAGGAGGAACCCATGGATACAGATCAAG...GAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367450.7
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CCA 90 bp TATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGCTTGATCTGTATCCATaGGTTCCTCCTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: YVITDYRQLPQLFKNLILLDLYP*VPPLQV
Trigger: AACTTGCAGAGGAGGAACCCATGGATACAGATCAAG...CAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443327.5
CDS-3UTR CCA 90 bp GCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGAAATTTATTCAAATTaGCATAGAAAGACCCCCATC +
Preference number: 4 (lower is better)
Translates to: ALKTRQAGTIAKRALSQLEIYSN*HRKTPI
Trigger: GATGGGGGTCTTTCTATGCCAATTTGAATAAATTTC...TAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATGCTGAAGCTGGAAGATaGGTACACATTCTCCCTAAT +
Preference number: 4 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHAEAGR*VHILPN
Trigger: ATTAGGGAGAATGTGTACCCATCTTCCAGCTTCAGC...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp GTTGTATTACATACTTATTATCTGTCTCACCATGAGAGCAGGGGCTTTTTCCTGACACTCACTATGGCTTaGGTAGCACAAGCATTATTA +
Preference number: 4 (lower is better)
Translates to: VVLHTYYLSHHESRGFFLTLTMA*VAQALL
Trigger: TAATAATGCTTGTGCTACTCAAGCCATAGTGAGTGT...CAGGAAAAAGCCCCTGCTCTCATGGTGAGACAGATAATAAGTATGTAATACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp TTTCAGGCTCTCTCTTCTGTTCCATTGCTTTATTTGTCAATCCTAGTGCCAGTAACACTCACTATGGCTTaGGTAGCACAAGCATTATTA +
Preference number: 4 (lower is better)
Translates to: FQALSSVPLLYLSILVPVTLTMA*VAQALL
Trigger: TAATAATGCTTGTGCTACTCAAGCCATAGTGAGTGT...TACTGGCACTAGGATTGACAAATAAAGCAATGGAACAGAAGAGAGAGCCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CAGAAAACTAACAGTTGTCAGACTCAATGTCAAATAATGGAATTTGGGAAAGCATTGTCGAATCACATCTaGATTGCTCAGTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: QKTNSCQTQCQIMEFGKALSNHI*IAQCQA
Trigger: GGCTTGGCACTGAGCAATTCAGATGTGATTCGACAA...TGCTTTCCCAAATTCCATTATTTGACATTGAGTCTGACAACTGTTAGTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR TCA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATCTGATCCAATCATCTTaGTTGCATGCACCTAAATCA +
Preference number: 4 (lower is better)
Translates to: YALHAHDAGREEVYESMHLIQSS*LHAPKS
Trigger: TGATTTAGGTGCATGCAATCAAGATGATTGGATCAG...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR TCA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTCTGATCCAATCATCTTaGTTGCATGCACCTAAATCA +
Preference number: 4 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCILIQSS*LHAPKS
Trigger: TGATTTAGGTGCATGCAATCAAGATGATTGGATCAG...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR TCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAACAGGCCTTACTGCACTaGTCCAATCATCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHEQALLH*SNHLDC
Trigger: GCAATCAAGATGATTGGATCAGTGCAGTAAGGCCTG...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR TCA 90 bp GAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTGTTTTGGCAACTTCTGACTaGATAGCACTTAACATACTA +
Preference number: 4 (lower is better)
Translates to: ESQHIVALHGAAISFLFVLATSD*IALNIL
Trigger: TAGTATGTTAAGTGCTATTCAGTCAGAAGTTGCCAA...AACAAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR TCA 90 bp TACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAAGACCTTCATTTGGTTTCCTaGGCTTTCTTTGCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: YMHMMQVGKKFMNPCIKDLHLVS*AFFAFC
Trigger: ACAGAACGCAAAGAAAGCTCAGGAAACCAAATGAAG...GTCTTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp GTTGTATTACATACTTATTATCTGTCTCACCATGAGAGCAGGGGCTTTTTCCTGAAAAAGCAGATAACATaGACTGTCAGACCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VVLHTYYLSHHESRGFFLKKQIT*TVRPPV
Trigger: AACTGGAGGTCTGACAGTTCATGTTATCTGCTTTTT...CAGGAAAAAGCCCCTGCTCTCATGGTGAGACAGATAATAAGTATGTAATACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp TACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAAGACGCTGAAATAAACGAATaGGATCAAGATGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: YMHMMQVGKKFMNPCIKDAEINE*DQDEPS
Trigger: GGAAGGCTCATCTTGATCTCATTCGTTTATTTCAGC...GTCTTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCTCAAAGTCATTTTTGTaGGGTAGGGGGTCATTGTTC +
Preference number: 4 (lower is better)
Translates to: RALSQLGCCSKFFIHNGFSKSFL*GRGSLF
Trigger: GAACAATGACCCCCTACCTCACAAAAATGACTTTGA...GAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp GTTCCTCATTCCTTGAACACAACTACTGCAACATGTTCTAACATTAATAGTTCCGGTTACTGCTTTCTGTaGCCTAAGAAACCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: VPHSLNTTTATCSNINSSGYCFL*PKKPLA
Trigger: AGCCAAAGGTTTCTTAGGTCACAGAAAGCAGTAACC...GGAACTATTAATGTTAGAACATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTTACCCTCTAGCTTCATaGCTTAATTTCAAACCAGCA +
Preference number: 4 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCIYPLAS*LNFKPA
Trigger: TGCTGGTTTGAAATTAAGTCATGAAGCTAGAGGGTA...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp AAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTTGGATGGGAGTAATCACATGCATGTTTGACTaGTCTAGGAATTCATACTAC +
Preference number: 4 (lower is better)
Translates to: KVSSSLGTPILYVWMGVITCMFD*SRNSYY
Trigger: GTAGTATGAATTCCTAGATCAGTCAAACATGCATGT...GATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp TCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGAGAATCACATCTGAATTaGTCAGTGCCAAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SSQIIGNCLSYSKISSCRESHLN*SVPSLS
Trigger: TGAAAGGCTTGGCACTGAGCAATTCAGATGTGATTC...TCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR GCA 90 bp AAATCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCCAATCATCTTGATTaGATGCACCTAAATCAATCG +
Preference number: 4 (lower is better)
Translates to: KSHPVESQHIVALHGAAISNHLD*MHLNQS
Trigger: CGATTGATTTAGGTGCATGCAATCAAGATGATTGGA...TATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp GTTGTATTACATACTTATTATCTGTCTCACCATGAGAGCAGGGGCTTTTTCCTGACTAGTGGTATTAACTaGTGGTGTTCTGCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: VVLHTYYLSHHESRGFFLTSGIN*WCSAKV
Trigger: GACTTTAGCAGAACACCAGCAGTTAATACCACTAGT...CAGGAAAAAGCCCCTGCTCTCATGGTGAGACAGATAATAAGTATGTAATACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTACTAGTGGTATTAACTaGTGGTGTTCTGCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCITSGIN*WCSAKV
Trigger: GACTTTAGCAGAACACCAGCAGTTAATACCACTAGT...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp TTTATAGGTTCTAACCAAGTTCATTATAGCCATGCCGAGGGAGAATCACTTTTTAGTAGCACTGCATGGTaGAGCCATATCTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FIGSNQVHYSHAEGESLFSSTAW*SHIFPV
Trigger: AACAGGAAAGATATGGCTGCACCATGCAGTGCTACT...AAAAAGTGATTCTCCCTCGGCATGGCTATAATGAACTTGGTTAGAACCTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR GCA 90 bp GTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTCAGATTATAGGCAACTaGCTCAGCTATTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: VESQHIVALHGAAISFLFQIIGN*LSYSKI
Trigger: GATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTG...AAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR CCA 90 bp CAGAAAACTAACAGTTGTCAGACTCAATGTCAAATAATGGAATTTGGGAAAGCAAATGTCTCGCCTAAATaGACATCCTGGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: QKTNSCQTQCQIMEFGKANVSPK*TSWWVQ
Trigger: CTGTACCCACCAGGATGTCCATTTAGGCGAGACATT...TGCTTTCCCAAATTCCATTATTTGACATTGAGTCTGACAACTGTTAGTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp AGGTCAAATACTTTTATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCACTTGATCTGTATCCATaGGTTCCTCTGCAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: RSNTFMSSQIIGNCLSYSLDLYP*VPLQVV
Trigger: GACAACTTGCAGAGGAACCCATGGATACAGATCAAG...TGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATAAAAGTATTTGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp GAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTGTTAGTGGTATTAACTGCTaGTGTTCTGCTAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: ESQHIVALHGAAISFLFVSGINC*CSAKVF
Trigger: AAAGACTTTAGCAGAACACCAGCAGTTAATACCACT...AACAAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR CCA 90 bp TCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGATATAGTAGCACTGCATaGTGCAGCCATATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSQIIGNCLSYSKISSCRYSSTA*CSHIFP
Trigger: AGGAAAGATATGGCTGCACCATGCAGTGCTACTATA...TCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR CCA 90 bp TCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGAATCTATAGTAGCACTGCATaGTGCAGCCATATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SQIIGNCLSYSKISSCRIYSSTA*CSHIFP
Trigger: AGGAAAGATATGGCTGCACCATGCAGTGCTACTATA...GATTCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR CCA 90 bp AAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTCTTGATCTGTATCCATaGGTTCCTCCTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: KRALSQLGCCSKFFIHNGLDLYP*VPPLQV
Trigger: AACTTGCAGAGGAGGAACCCATGGATACAGATCAAG...ACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367450.7
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CCA 90 bp CACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAAAGGCTTAAAATAGAATaGAAGCGACTTCACCTACCC +
Preference number: 4 (lower is better)
Translates to: HYMHMMQVGKKFMNPCIKRLKIE*KRLHLP
Trigger: GGGTAGGTGAAGTCGCTTCCATTCTATTTTAAGCCT...TTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTCCAATACTGTATGTTTaGATGGGAGTAATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCIPILYV*MGVISG
Trigger: TCCAGAGATTACTCCCATCCAAACATACAGTATTGG...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp TCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGAATCACACTCACTATGGCTTaGGTAGCACAAGCATTATTA +
Preference number: 4 (lower is better)
Translates to: SQIIGNCLSYSKISSCRITLTMA*VAQALL
Trigger: TAATAATGCTTGTGCTACTCAAGCCATAGTGAGTGT...GATTCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR TCA 90 bp CGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCACACTCACTATGGCTTaGGTAGCACAAGCATTATTA +
Preference number: 4 (lower is better)
Translates to: RALSQLGCCSKFFIHNGFTLTMA*VAQALL
Trigger: TAATAATGCTTGTGCTACTCAAGCCATAGTGAGTGT...GAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp TATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGAACATACTATTACCTTaGTCTGTATCCATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: YVITDYRQLPQLFKNLILNILLP*SVSMGS
Trigger: GGAACCCATGGATACAGATCAAGGTAATAGTATGTT...CAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR TCA 90 bp AGGTTTAACTTTTCTGCATTCCAGTGCACAGTCATTAAGTGTTACAGCAGGTTCTTGGCAACTTCTGACTaGATAGCACTTAACATACTA +
Preference number: 4 (lower is better)
Translates to: RFNFSAFQCTVIKCYSRFLATSD*IALNIL
Trigger: TAGTATGTTAAGTGCTATTCAGTCAGAAGTTGCCAA...GAACCTGCTGTAACACTTAATGACTGTGCACTGGAATGCAGAAAAGTTAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CTTTATTCACAGACAGAAGTAATCATGAAGTATCACAAGGGATTTGCAATCACCATTACATATGGCTCTTaGAAACTGCAGGCTGTACGA +
Preference number: 4 (lower is better)
Translates to: LYSQTEVIMKYHKGFAITITYGS*KLQAVR
Trigger: TCGTACAGCCTGCAGTTTTCAAGAGCCATATGTAAT...GGTGATTGCAAATCCCTTGTGATACTTCATGATTACTTCTGTCTGTGAATAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp GTTCCTCATTCCTTGAACACAACTACTGCAACATGTTCTAACATTAATAGTTCCATTACATATGGCTCTTaGAAACTGCAGGCTGTACGA +
Preference number: 4 (lower is better)
Translates to: VPHSLNTTTATCSNINSSITYGS*KLQAVR
Trigger: TCGTACAGCCTGCAGTTTTCAAGAGCCATATGTAAT...GGAACTATTAATGTTAGAACATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATACTTTCCTTCTCTGTTaGATTGTTTTGCCACCTTTG +
Preference number: 4 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHTFLLC*IVLPPL
Trigger: CAAAGGTGGCAAAACAATTCAACAGAGAAGGAAAGT...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAAACTTTCCTTCTCTGTTaGATTGTTTTGCCACCTTTG +
Preference number: 4 (lower is better)
Translates to: HYMHMMQVGKKFMNPCIKTFLLC*IVLPPL
Trigger: CAAAGGTGGCAAAACAATTCAACAGAGAAGGAAAGT...TTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTCCAATCATCTTGATTaGATGCACCTAAATCAATCG +
Preference number: 4 (lower is better)
Translates to: YALHAHDAGREEVYESMHSNHLD*MHLNQS
Trigger: CGATTGATTTAGGTGCATGCAATCAAGATGATTGGA...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp AGGTCAAATACTTTTATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCATATGACAGGCCTTACTaGACTGATCCAATCATCTTG +
Preference number: 4 (lower is better)
Translates to: RSNTFMSSQIIGNCLSYSYDRPY*TDPIIL
Trigger: CAAGATGATTGGATCAGTGCAGTAAGGCCTGTCATA...TGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATAAAAGTATTTGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp TCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGAATCACTAGTGGTATTAACTaGTGGTGTTCTGCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: SQIIGNCLSYSKISSCRITSGIN*WCSAKV
Trigger: GACTTTAGCAGAACACCAGCAGTTAATACCACTAGT...GATTCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAACACTATTGCCAAACGTaGACTGAGCCAATTAGGATG +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHEHYCQT*TEPIRM
Trigger: CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTG...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp CAGAAAACTAACAGTTGTCAGACTCAATGTCAAATAATGGAATTTGGGAAAGCACACTATTGCCAAACGTaGACTGAGCCAATTAGGATG +
Preference number: 4 (lower is better)
Translates to: QKTNSCQTQCQIMEFGKAHYCQT*TEPIRM
Trigger: CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTG...TGCTTTCCCAAATTCCATTATTTGACATTGAGTCTGACAACTGTTAGTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATGTACTAGAGAAGTTCTaGCTATATGCCTATATGCAA +
Preference number: 4 (lower is better)
Translates to: YALHAHDAGREEVYESMHVLEKF*LYAYMQ
Trigger: TTGCATATAGGCATATAGGCAGAACTTCTCTAGTAC...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTATTGCACATTGGTTCTaGCTATATGCCTATATGCAA +
Preference number: 4 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCIIAHWF*LYAYMQ
Trigger: TTGCATATAGGCATATAGGCAGAACCAATGTGCAAT...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp GTTGTATTACATACTTATTATCTGTCTCACCATGAGAGCAGGGGCTTTTTCCTGATTGCACATTGGTTCTaGCTATATGCCTATATGCAA +
Preference number: 4 (lower is better)
Translates to: VVLHTYYLSHHESRGFFLIAHWF*LYAYMQ
Trigger: TTGCATATAGGCATATAGGCAGAACCAATGTGCAAT...CAGGAAAAAGCCCCTGCTCTCATGGTGAGACAGATAATAAGTATGTAATACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAACATATTTCTTCTACTTaGGCTCCTCGGCAACCGAAT +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHEHISST*APRQPN
Trigger: ATTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATG...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp AGGTCAAATACTTTTATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAATGGACATCCTGGTaGGTACAGTTCAGTAACACA +
Preference number: 4 (lower is better)
Translates to: RSNTFMSSQIIGNCLSYSKWTSW*VQFSNT
Trigger: TGTGTTACTGAACTGTACCCACCAGGATGTCCATTT...TGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATAAAAGTATTTGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp TCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGAATCCAAACATTTGCTGTCTaGCGAAACTGTTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: SQIIGNCLSYSKISSCRIQTFAV*RNCCVL
Trigger: AAGTACACAACAGTTTCGCCAGACAGCAAATGTTTG...GATTCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAACTTGATCTGTATCCATaGGTTCCTCTGCAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHELDLYP*VPLQVV
Trigger: GACAACTTGCAGAGGAACCCATGGATACAGATCAAG...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367451.8
ENST00000367454.6
ENST00000449480.5
CDS-3UTR CCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAACTTGATCTGTATCCATaGGTTCCTCCTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHELDLYP*VPPLQV
Trigger: AACTTGCAGAGGAGGAACCCATGGATACAGATCAAG...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367450.7
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CCA 90 bp GAAGTAATCATGAAGTATCACAAGGGATTTGCAATCACCAAAGAAGATGCAGATAGGCTTAAAATAGAATaGAAGCGACTTCACCTACCC +
Preference number: 4 (lower is better)
Translates to: EVIMKYHKGFAITKEDADRLKIE*KRLHLP
Trigger: GGGTAGGTGAAGTCGCTTCCATTCTATTTTAAGCCT...ATCTGCATCTTCTTTGGTGATTGCAAATCCCTTGTGATACTTCATGATTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp TTTATAGGTTCTAACCAAGTTCATTATAGCCATGCCGAGGGAGAATCACTTTTTCTGATCCAATCATCTTaGTTGCATGCACCTAAATCA +
Preference number: 4 (lower is better)
Translates to: FIGSNQVHYSHAEGESLFLIQSS*LHAPKS
Trigger: TGATTTAGGTGCATGCAATCAAGATGATTGGATCAG...AAAAAGTGATTCTCCCTCGGCATGGCTATAATGAACTTGGTTAGAACCTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR TCA 90 bp TATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTTGGCAACTTCTGACTaGATAGCACTTAACATACTA +
Preference number: 4 (lower is better)
Translates to: YVITDYRQLPQLFKNLILLATSD*IALNIL
Trigger: TAGTATGTTAAGTGCTATTCAGTCAGAAGTTGCCAA...CAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR TCA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATTTGGCAACTTCTGACTaGATAGCACTTAACATACTA +
Preference number: 4 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHLATSD*IALNIL
Trigger: TAGTATGTTAAGTGCTATTCAGTCAGAAGTTGCCAA...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp CACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAATTGGCAACTTCTGACTaGATAGCACTTAACATACTA +
Preference number: 4 (lower is better)
Translates to: HYMHMMQVGKKFMNPCIKLATSD*IALNIL
Trigger: TAGTATGTTAAGTGCTATTCAGTCAGAAGTTGCCAA...TTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAACTTCATTTGGTTTCCTaGGCTTTCTTTGCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHELHLVS*AFFAFC
Trigger: ACAGAACGCAAAGAAAGCTCAGGAAACCAAATGAAG...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp AGGTCAAATACTTTTATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCAGGTTCTTCTCCTGGCTaGCACTTGAAAAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: RSNTFMSSQIIGNCLSYSGSSPG*HLKRKI
Trigger: AATTTTTCTTTTCAAGTGGCAGCCAGGAGAAGAACC...TGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATAAAAGTATTTGACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR GCA 90 bp GTTCCTCATTCCTTGAACACAACTACTGCAACATGTTCTAACATTAATAGTTCCGGTTCTTCTCCTGGCTaGCACTTGAAAAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: VPHSLNTTTATCSNINSSGSSPG*HLKRKI
Trigger: AATTTTTCTTTTCAAGTGGCAGCCAGGAGAAGAACC...GGAACTATTAATGTTAGAACATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp CACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAATCAAATTCAAACATTTaGTGTCTGGCGAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: HYMHMMQVGKKFMNPCIKSNSNI*CLAKLL
Trigger: CAACAGTTTCGCCAGACAGCAAATGTTTGAATTTGA...TTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATTCAAATTCAAACATTTaGTGTCTGGCGAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHSNSNI*CLAKLL
Trigger: CAACAGTTTCGCCAGACAGCAAATGTTTGAATTTGA...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp TACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAAGACTCCAATCATCTTGATTaGATGCACCTAAATCAATCG +
Preference number: 4 (lower is better)
Translates to: YMHMMQVGKKFMNPCIKDSNHLD*MHLNQS
Trigger: CGATTGATTTAGGTGCATGCAATCAAGATGATTGGA...GTCTTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATTCCAATCATCTTGATTaGATGCACCTAAATCAATCG +
Preference number: 4 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHSNHLD*MHLNQS
Trigger: CGATTGATTTAGGTGCATGCAATCAAGATGATTGGA...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp CAGAAAACTAACAGTTGTCAGACTCAATGTCAAATAATGGAATTTGGGAAAGCATATGACAGGCCTTACTaGACTGATCCAATCATCTTG +
Preference number: 4 (lower is better)
Translates to: QKTNSCQTQCQIMEFGKAYDRPY*TDPIIL
Trigger: CAAGATGATTGGATCAGTGCAGTAAGGCCTGTCATA...TGCTTTCCCAAATTCCATTATTTGACATTGAGTCTGACAACTGTTAGTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp TATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGCAGATTATAGGCAACTaGCTCAGCTATTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: YVITDYRQLPQLFKNLILQIIGN*LSYSKI
Trigger: GATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTG...CAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR CCA 90 bp CAGAAAACTAACAGTTGTCAGACTCAATGTCAAATAATGGAATTTGGGAAAGCAAAATGGACATCCTGGTaGGTACAGTTCAGTAACACA +
Preference number: 4 (lower is better)
Translates to: QKTNSCQTQCQIMEFGKAKWTSW*VQFSNT
Trigger: TGTGTTACTGAACTGTACCCACCAGGATGTCCATTT...TGCTTTCCCAAATTCCATTATTTGACATTGAGTCTGACAACTGTTAGTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp ACGAAATTTATTCAAATTGGCATAGAAAGACCCCCATCACCACTACCATCTTTTCAAACATTTGCTGTCTaGCGAAACTGTTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: TKFIQIGIERPPSPLPSFQTFAV*RNCCVL
Trigger: AAGTACACAACAGTTTCGCCAGACAGCAAATGTTTG...AAAAGATGGTAGTGGTGATGGGGGTCTTTCTATGCCAATTTGAATAAATTTCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp ACATTTATAGGTTCTAACCAAGTTCATTATAGCCATGCCGAGGGAGAATCACTTAGTGGTATTAACTGCTaGTGTTCTGCTAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: TFIGSNQVHYSHAEGESLSGINC*CSAKVF
Trigger: AAAGACTTTAGCAGAACACCAGCAGTTAATACCACT...AAGTGATTCTCCCTCGGCATGGCTATAATGAACTTGGTTAGAACCTATAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CCA 90 bp TCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGAATCAGTGGTATTAACTGCTaGTGTTCTGCTAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SQIIGNCLSYSKISSCRISGINC*CSAKVF
Trigger: AAAGACTTTAGCAGAACACCAGCAGTTAATACCACT...GATTCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR CCA 90 bp AGGTTTAACTTTTCTGCATTCCAGTGCACAGTCATTAAGTGTTACAGCAGGTTCTCAGCTATTCTATTCTaGCTCCATTTGTTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: RFNFSAFQCTVIKCYSRFSAILF*LHLLKR
Trigger: TCTTTTCAACAAATGGAGCCAGAATAGAATAGCTGA...GAACCTGCTGTAACACTTAATGACTGTGCACTGGAATGCAGAAAAGTTAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAAACACTCACTATGGCTTaGGTAGCACAAGCATTATTA +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHETLTMA*VAQALL
Trigger: TAATAATGCTTGTGCTACTCAAGCCATAGTGAGTGT...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAACTGATCCAATCATCTTaGTTGCATGCACCTAAATCA +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHELIQSS*LHAPKS
Trigger: TGATTTAGGTGCATGCAATCAAGATGATTGGATCAG...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR TCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAAAACATACTATTACCTTaGTCTGTATCCATGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHENILLP*SVSMGS
Trigger: GGAACCCATGGATACAGATCAAGGTAATAGTATGTT...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp AAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTGGCAACTTCTGACTaGATAGCACTTAACATACTA +
Preference number: 4 (lower is better)
Translates to: KRALSQLGCCSKFFIHNGLATSD*IALNIL
Trigger: TAGTATGTTAAGTGCTATTCAGTCAGAAGTTGCCAA...ACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR TCA 90 bp AAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTACATGCATGTTTGACTaGTCTAGGAATTCATACTAC +
Preference number: 4 (lower is better)
Translates to: KRALSQLGCCSKFFIHNGTCMFD*SRNSYY
Trigger: GTAGTATGAATTCCTAGATCAGTCAAACATGCATGT...ACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp TTTATAGGTTCTAACCAAGTTCATTATAGCCATGCCGAGGGAGAATCACTTTTTTCAAATTCAAACATTTaGTGTCTGGCGAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: FIGSNQVHYSHAEGESLFSNSNI*CLAKLL
Trigger: CAACAGTTTCGCCAGACAGCAAATGTTTGAATTTGA...AAAAAGTGATTCTCCCTCGGCATGGCTATAATGAACTTGGTTAGAACCTATAAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR GCA 90 bp GAAGTAATCATGAAGTATCACAAGGGATTTGCAATCACCAAAGAAGATGCAGATTCAAATTCAAACATTTaGTGTCTGGCGAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: EVIMKYHKGFAITKEDADSNSNI*CLAKLL
Trigger: CAACAGTTTCGCCAGACAGCAAATGTTTGAATTTGA...ATCTGCATCTTCTTTGGTGATTGCAAATCCCTTGTGATACTTCATGATTACTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp AGGTCAAATACTTTTATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCATCCAATCATCTTGATTaGATGCACCTAAATCAATCG +
Preference number: 4 (lower is better)
Translates to: RSNTFMSSQIIGNCLSYSSNHLD*MHLNQS
Trigger: CGATTGATTTAGGTGCATGCAATCAAGATGATTGGA...TGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATAAAAGTATTTGACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR GCA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATTCTGTTGAATTGTTTTaGCACCTTTGTCGAAATCAA +
Preference number: 4 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHSVELF*HLCRNQ
Trigger: TTGATTTCGACAAAGGTGGCAAAACAATTCAACAGA...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR TCA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAATTGGCAACTTCTGACTaGATAGCACTTAACATACTA +
Preference number: 4 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHELATSD*IALNIL
Trigger: TAGTATGTTAAGTGCTATTCAGTCAGAAGTTGCCAA...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000449480.5
CDS-3UTR GCA 90 bp CAGAAAACTAACAGTTGTCAGACTCAATGTCAAATAATGGAATTTGGGAAAGCATCAAATTCAAACATTTaGTGTCTGGCGAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: QKTNSCQTQCQIMEFGKASNSNI*CLAKLL
Trigger: CAACAGTTTCGCCAGACAGCAAATGTTTGAATTTGA...TGCTTTCCCAAATTCCATTATTTGACATTGAGTCTGACAACTGTTAGTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR GCA 90 bp CAGAAAACTAACAGTTGTCAGACTCAATGTCAAATAATGGAATTTGGGAAAGCAATGGCTCTTGAAAACTaGAGGCTGTACGAAATTTAT +
Preference number: 4 (lower is better)
Translates to: QKTNSCQTQCQIMEFGKAMALEN*RLYEIY
Trigger: ATAAATTTCGTACAGCCTGCAGTTTTCAAGAGCCAT...TGCTTTCCCAAATTCCATTATTTGACATTGAGTCTGACAACTGTTAGTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR GCA 90 bp CAGAAAACTAACAGTTGTCAGACTCAATGTCAAATAATGGAATTTGGGAAAGCATTTTCTGCATTCCAGTaGACAGTCATTAAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: QKTNSCQTQCQIMEFGKAFSAFQ*TVIKCY
Trigger: GTAACACTTAATGACTGTGCACTGGAATGCAGAAAA...TGCTTTCCCAAATTCCATTATTTGACATTGAGTCTGACAACTGTTAGTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CCA 90 bp GTTCCTCATTCCTTGAACACAACTACTGCAACATGTTCTAACATTAATAGTTCCATTTTGGATCTTTTATaGTTACTGCTTTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: VPHSLNTTTATCSNINSSILDLL*LLLSVT
Trigger: GGTCACAGAAAGCAGTAACCATAAAAGATCCAAAAT...GGAACTATTAATGTTAGAACATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS TCA 90 bp TCCTGGCGGCGCTGCGGATCCAGGGGGTCGGCTGCCAGGTACAGGTaGGGACATTGCGGGAGGCCGGCTGGGAGCCTTTTGTGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: SWRRCGSRGSAARYR*GHCGRPAGSLLCGP
Trigger: GGGGCCGCACAAAAGGCTCCCAGCCGGCCTCCCGCAATGTCCTCACCTGTACCTGGCAGCCGACCCCCTGGATCCGCAGCGCCGCCAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS GCA 90 bp ATGGCCCTGGCCACACACCGCCCCGATCCACCTCTCGCTCTCAGCTaGCCCCCGCACCAGCTGCCGCCGGCCACAGATCTCAGCAAACCC +
Preference number: 5 (lower is better)
Translates to: MALATHRPDPPLALS*PPHQLPPATDLSKP
Trigger: GGGTTTGCTGAGATCTGTGGCCGGCGGCAGCTGGTGCGGGGGGCAGCTGAGAGCGAGAGGTGGATCGGGGCGGTGTGTGGCCAGGGCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS GCA 90 bp TGCGCAGGACTTCTCCTGGCGGCGCTGCGGATCCAGGGGGTCGGCTaGCAGGTACAGGTGAGGACATTGCGGGAGGCCGGCTGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: CAGLLLAALRIQGVG*QVQVRTLREAGWEP
Trigger: AGGCTCCCAGCCGGCCTCCCGCAATGTCCTCACCTGTACCTGGCAGCCGACCCCCTGGATCCGCAGCGCCGCCAGGAGAAGTCCTGCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS GCA 90 bp CTGTCGCTGCCCGTCAGGCTGCCTTCTTTTGTCGTTTCCCAGCGCTaGGCAGGACTTCTCCTGGCGGCGCTGCGGATCCAGGGGGTCGGC +
Preference number: 5 (lower is better)
Translates to: LSLPVRLPSFVVSQR*AGLLLAALRIQGVG
Trigger: GCCGACCCCCTGGATCCGCAGCGCCGCCAGGAGAAGTCCTGCGCAGCGCTGGGAAACGACAAAAGAAGGCAGCCTGACGGGCAGCGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS GCA 90 bp GGACGCTCTAGCCACCCTAGAGACATCGAAACTCTTCCCAGGCCTTaGAGCACCCGTAGCGGATTCGGAAGGGCTGGGGCCTGGAATCCC +
Preference number: 5 (lower is better)
Translates to: GRSSHPRDIETLPRP*STRSGFGRAGAWNP
Trigger: GGGATTCCAGGCCCCAGCCCTTCCGAATCCGCTACGGGTGCTGCAAGGCCTGGGAAGAGTTTCGATGTCTCTAGGGTGGCTAGAGCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS-3UTR CAA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAACACCACTCCCCGGCATaGCCCGTCATGGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: HALKTRQAGTIAKRALSQHHSPA*PVMALA
Trigger: GGCCAGGGCCATGACGGGCAATGCCGGGGAGTGGTG...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp GAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTGTTCACCACTCCCCGGCATaGCCCGTCATGGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: ESQHIVALHGAAISFLFVHHSPA*PVMALA
Trigger: GGCCAGGGCCATGACGGGCAATGCCGGGGAGTGGTG...AACAAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp AAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTTGGATGGGAGTAATCCACCACTCCCCGGCATaGCCCGTCATGGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: KVSSSLGTPILYVWMGVIHHSPA*PVMALA
Trigger: GGCCAGGGCCATGACGGGCAATGCCGGGGAGTGGTG...GATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGCACCACTCCCCGGCATaGCCCGTCATGGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: YVITDYRQLPQLFKNLILHHSPA*PVMALA
Trigger: GGCCAGGGCCATGACGGGCAATGCCGGGGAGTGGTG...CAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp TACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAAGACCACCACTCCCCGGCATaGCCCGTCATGGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: YMHMMQVGKKFMNPCIKDHHSPA*PVMALA
Trigger: GGCCAGGGCCATGACGGGCAATGCCGGGGAGTGGTG...GTCTTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGCCATATTTCTTCTACTaGGGCTCCTCGGCAACCGAA +
Preference number: 5 (lower is better)
Translates to: KDKTGWHYCQTCTEPIRMPYFFY*GSSATE
Trigger: TTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATGG...CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAACCATATTTCTTCTACTaGGGCTCCTCGGCAACCGAA +
Preference number: 5 (lower is better)
Translates to: HALKTRQAGTIAKRALSQPYFFY*GSSATE
Trigger: TTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATGG...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGCCAGTGCCGCAGCTGTaGGCAAGGTTTTTGTTGATA +
Preference number: 5 (lower is better)
Translates to: KDKTGWHYCQTCTEPIRMPVPQL*ARFLLI
Trigger: TATCAACAAAAACCTTGCCAACAGCTGCGGCACTGG...CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AGTTCCAACAGTGAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACTCTGGAGACTTAAGCTaGAAACCGCTCCTCCAAACC +
Preference number: 5 (lower is better)
Translates to: SSNSELPDCCKSEQFPRYSGDLS*KPLLQT
Trigger: GGTTTGGAGGAGCGGTTTCAAGCTTAAGTCTCCAGA...GTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTCACTGTTGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGCGAATCACATCTGAATaGCTCAGTGCCAAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: KDKTGWHYCQTCTEPIRMRITSE*LSAKPF
Trigger: GAAAGGCTTGGCACTGAGCAATTCAGATGTGATTCG...CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp GCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTACGAATCACATCTGAATaGCTCAGTGCCAAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: ALKTRQAGTIAKRALSQLRITSE*LSAKPF
Trigger: GAAAGGCTTGGCACTGAGCAATTCAGATGTGATTCG...TAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp ATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCTGTCTGGCGAAACTGTaGTGTACTTGTCGAATCACA +
Preference number: 5 (lower is better)
Translates to: IHALKTRQAGTIAKRALSCLAKL*CTCRIT
Trigger: TGTGATTCGACAAGTACACAACAGTTTCGCCAGACA...GCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATGTCTGGCGAAACTGTaGTGTACTTGTCGAATCACA +
Preference number: 5 (lower is better)
Translates to: HALKTRQAGTIAKRALSQCLAKL*CTCRIT
Trigger: TGTGATTCGACAAGTACACAACAGTTTCGCCAGACA...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTCCTTCTCTGTTGAATaGTTTTGCCACCTTTGTCGA +
Preference number: 5 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKSFSVE*FCHLCR
Trigger: TCGACAAAGGTGGCAAAACAATTCAACAGAGAAGGA...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAACACACTCACTATGGCTaGAGTAGCACAAGCATTATT +
Preference number: 5 (lower is better)
Translates to: HALKTRQAGTIAKRALSQHTHYG*SSTSII
Trigger: AATAATGCTTGTGCTACTCAAGCCATAGTGAGTGTG...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGCACACTCACTATGGCTaGAGTAGCACAAGCATTATT +
Preference number: 5 (lower is better)
Translates to: KDKTGWHYCQTCTEPIRMHTHYG*SSTSII
Trigger: AATAATGCTTGTGCTACTCAAGCCATAGTGAGTGTG...CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCGAATCACATCTGAATaGCTCAGTGCCAAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: HPVESQHIVALHGAAISFRITSE*LSAKPF
Trigger: GAAAGGCTTGGCACTGAGCAATTCAGATGTGATTCG...GAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp AGTTCCAACAGTGAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACAATTACATATGGCTCTaGAAAACTGCAGGCTGTACG +
Preference number: 5 (lower is better)
Translates to: SSNSELPDCCKSEQFPRYNYIWL*KTAGCT
Trigger: CGTACAGCCTGCAGTTTTCAAGAGCCATATGTAATT...GTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTCACTGTTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGCTATTCTGGCTCCATTaGTTGAAAAGACTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKLFWLH*LKRLSF
Trigger: GAAGGAAAGTCTTTTCAACAAATGGAGCCAGAATAG...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATCCATATTTCTTCTACTaGGGCTCCTCGGCAACCGAA +
Preference number: 5 (lower is better)
Translates to: YALHAHDAGREEVYESMHPYFFY*GSSATE
Trigger: TTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATGG...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGTCTCCTGGCTGCCACTaGAAAAGAAAAATTAACCCA +
Preference number: 5 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTESPGCH*KRKINP
Trigger: TGGGTTAATTTTTCTTTTCAAGTGGCAGCCAGGAGA...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTTGTCTGGCGAAACTGTaGTGTACTTGTCGAATCACA +
Preference number: 5 (lower is better)
Translates to: SCRISAYSSTAWCSHIFPCLAKL*CTCRIT
Trigger: TGTGATTCGACAAGTACACAACAGTTTCGCCAGACA...AGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp GGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTTGTCTGGCGAAACTGTaGTGTACTTGTCGAATCACA +
Preference number: 5 (lower is better)
Translates to: GTIAKRALSQLGCCSKFFCLAKL*CTCRIT
Trigger: TGTGATTCGACAAGTACACAACAGTTTCGCCAGACA...AAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp AAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCATCAAATTCAAACATTaGCTGTCTGGCGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: KTGWHYCQTCTEPIRMLLIKFKH*LSGETV
Trigger: AACAGTTTCGCCAGACAGCAAATGTTTGAATTTGAT...GAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp CAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGCGTTCTGTTTTTCTTTaGCCTTTTCTACTAGTGGTA +
Preference number: 5 (lower is better)
Translates to: QAGTIAKRALSQLGCCSKRSVFL*PFLLVV
Trigger: TACCACTAGTAGAAAAGGCAAAAGAAAAACAGAACG...CTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAAAGTATCACAAGGGATTaGCAATCACCAAAGAAGATG +
Preference number: 5 (lower is better)
Translates to: HALKTRQAGTIAKRALSQSITRD*QSPKKM
Trigger: CATCTTCTTTGGTGATTGCAAATCCCTTGTGATACT...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGTTCCCGAGCAAATATTaGTCTGTTTTAGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTEFPSKY*SVLVAQ
Trigger: CTGTGCCACTAAAACAGACAAATATTTGCTCGGGAA...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTTACCATGTCAGTCATaGGATTTAGGCCAGTTAACA +
Preference number: 5 (lower is better)
Translates to: KTRQAGTIAKRALSQLGCLPCQS*DLGQLT
Trigger: TGTTAACTGGCCTAAATCCAATGACTGACATGGTAA...ACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS TCA 90 bp CATTTGCTGTCTGGCGAAACTGTTGTGTACTTGTCGAATCACATCTaGATTGCTCAGTGCCAAGCCTTTCATAGCTGCATCAAAACTTTG +
Preference number: 5 (lower is better)
Translates to: HLLSGETVVYLSNHI*IAQCQAFHSCIKTL
Trigger: CAAAGTTTTGATGCAGCTATGAAAGGCTTGGCACTGAGCAATTCAGATGTGATTCGACAAGTACACAACAGTTTCGCCAGACAGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000421683.1
CDS-3UTR CAA 90 bp TATGTCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGCCATATTTCTTCTACTaGGGCTCCTCGGCAACCGAA +
Preference number: 5 (lower is better)
Translates to: YVITDYRQLPQLFKNLILPYFFY*GSSATE
Trigger: TTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATGG...CAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATCCATATTTCTTCTACTaGGGCTCCTCGGCAACCGAA +
Preference number: 5 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHPYFFY*GSSATE
Trigger: TTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATGG...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCACACTCACTATGGCTaGAGTAGCACAAGCATTATT +
Preference number: 5 (lower is better)
Translates to: HPVESQHIVALHGAAISFHTHYG*SSTSII
Trigger: AATAATGCTTGTGCTACTCAAGCCATAGTGAGTGTG...GAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp GGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTCACACTCACTATGGCTaGAGTAGCACAAGCATTATT +
Preference number: 5 (lower is better)
Translates to: GTIAKRALSQLGCCSKFFHTHYG*SSTSII
Trigger: AATAATGCTTGTGCTACTCAAGCCATAGTGAGTGTG...AAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TTTCAGGCTCTCTCTTCTGTTCCATTGCTTTATTTGTCAATCCTAGTGCCAGTACGAATCACATCTGAATaGCTCAGTGCCAAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: FQALSSVPLLYLSILVPVRITSE*LSAKPF
Trigger: GAAAGGCTTGGCACTGAGCAATTCAGATGTGATTCG...TACTGGCACTAGGATTGACAAATAAAGCAATGGAACAGAAGAGAGAGCCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAAAAGCATCTTCTTCTTTaGCTGATGTCTTCGTATCAA +
Preference number: 5 (lower is better)
Translates to: HALKTRQAGTIAKRALSQKHLLL*LMSSYQ
Trigger: TTGATACGAAGACATCAGCAAAAGAAGAAGATGCTT...TTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp AAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTAAGCATCTTCTTCTTTaGCTGATGTCTTCGTATCAA +
Preference number: 5 (lower is better)
Translates to: KTRQAGTIAKRALSQLGCKHLLL*LMSSYQ
Trigger: TTGATACGAAGACATCAGCAAAAGAAGAAGATGCTT...ACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGTTCTGGCTCCATTTGTaGAAAAGACTTTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTEFWLHL*KRLSFS
Trigger: AGAGAAGGAAAGTCTTTTCAACAAATGGAGCCAGAA...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCTCTGGAGACTTAAGCTaGAAACCGCTCCTCCAAACC +
Preference number: 5 (lower is better)
Translates to: RALSQLGCCSKFFIHNGFSGDLS*KPLLQT
Trigger: GGTTTGGAGGAGCGGTTTCAAGCTTAAGTCTCCAGA...GAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGCTTAATTATTGCACATaGGTTCTGCCTATATGCCTA +
Preference number: 5 (lower is better)
Translates to: KDKTGWHYCQTCTEPIRMLNYCT*VLPICL
Trigger: TAGGCATATAGGCAGAACCAATGTGCAATAATTAAG...CATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TTTATAGGTTCTAACCAAGTTCATTATAGCCATGCCGAGGGAGAATCACTTTTTCCATATTTCTTCTACTaGGGCTCCTCGGCAACCGAA +
Preference number: 5 (lower is better)
Translates to: FIGSNQVHYSHAEGESLFPYFFY*GSSATE
Trigger: TTCGGTTGCCGAGGAGCCCAAGTAGAAGAAATATGG...AAAAAGTGATTCTCCCTCGGCATGGCTATAATGAACTTGGTTAGAACCTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp GAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTGTTTGTTTCTCCTGGCTGCCACTaGAAAAGAAAAATTAACCCA +
Preference number: 5 (lower is better)
Translates to: ESQHIVALHGAAISFLFVSPGCH*KRKINP
Trigger: TGGGTTAATTTTTCTTTTCAAGTGGCAGCCAGGAGA...AACAAACAGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp GAACTCCCTGACTGTTGCAAAAGTGAGCAGTTCCCTAGGTACACCAATACTGTACTCTCTTCTGTTCCATaGCTTTATTTGTCAATCCTA +
Preference number: 5 (lower is better)
Translates to: ELPDCCKSEQFPRYTNTVLSSVP*LYLSIL
Trigger: TAGGATTGACAAATAAAGCAATGGAACAGAAGAGAG...TACAGTATTGGTGTACCTAGGGAACTGCTCACTTTTGCAACAGTCAGGGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CTTTATTCACAGACAGAAGTAATCATGAAGTATCACAAGGGATTTGCAATCACCCCAGTGCCGCAGCTGTaGGCAAGGTTTTTGTTGATA +
Preference number: 5 (lower is better)
Translates to: LYSQTEVIMKYHKGFAITPVPQL*ARFLLI
Trigger: TATCAACAAAAACCTTGCCAACAGCTGCGGCACTGG...GGTGATTGCAAATCCCTTGTGATACTTCATGATTACTTCTGTCTGTGAATAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AGGTTTAACTTTTCTGCATTCCAGTGCACAGTCATTAAGTGTTACAGCAGGTTCCAGGTTCCTCATTCCTaGAACACAACTACTGCAACA +
Preference number: 5 (lower is better)
Translates to: RFNFSAFQCTVIKCYSRFQVPHS*NTTTAT
Trigger: TGTTGCAGTAGTTGTGTTCAAGGAATGAGGAACCTG...GAACCTGCTGTAACACTTAATGACTGTGCACTGGAATGCAGAAAAGTTAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATCAGGTTCCTCATTCCTaGAACACAACTACTGCAACA +
Preference number: 5 (lower is better)
Translates to: YALHAHDAGREEVYESMHQVPHS*NTTTAT
Trigger: TGTTGCAGTAGTTGTGTTCAAGGAATGAGGAACCTG...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AATCCATGCATTAAAGACAAGACAGGCTGGCACTATTGCCAAACGTGCACTGAGCGTTCTGTTTTTCTTTaGCCATGTATTCTCGTCTTT +
Preference number: 5 (lower is better)
Translates to: NPCIKDKTGWHYCQTCTERSVFL*PCILVF
Trigger: AAAGACGAGAATACATGGCAAAAGAAAAACAGAACG...CTCAGTGCACGTTTGGCAATAGTGCCAGCCTGTCTTGTCTTTAATGCATGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420791.5
ENST00000449480.5
CDS-3UTR CAA 90 bp TTTATAGGTTCTAACCAAGTTCATTATAGCCATGCCGAGGGAGAATCACTTTTTCGAATCACATCTGAATaGCTCAGTGCCAAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: FIGSNQVHYSHAEGESLFRITSE*LSAKPF
Trigger: GAAAGGCTTGGCACTGAGCAATTCAGATGTGATTCG...AAAAAGTGATTCTCCCTCGGCATGGCTATAATGAACTTGGTTAGAACCTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp GTTCCTCATTCCTTGAACACAACTACTGCAACATGTTCTAACATTAATAGTTCCCGAATCACATCTGAATaGCTCAGTGCCAAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: VPHSLNTTTATCSNINSSRITSE*LSAKPF
Trigger: GAAAGGCTTGGCACTGAGCAATTCAGATGTGATTCG...GGAACTATTAATGTTAGAACATGTTGCAGTAGTTGTGTTCAAGGAATGAGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGATGTCTGGCGAAACTGTaGTGTACTTGTCGAATCACA +
Preference number: 5 (lower is better)
Translates to: SSQIIGNCLSYSKISSCRCLAKL*CTCRIT
Trigger: TGTGATTCGACAAGTACACAACAGTTTCGCCAGACA...TCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATTGTCTGGCGAAACTGTaGTGTACTTGTCGAATCACA +
Preference number: 5 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHCLAKL*CTCRIT
Trigger: TGTGATTCGACAAGTACACAACAGTTTCGCCAGACA...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp ATCTCATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCATCAAATTCAAACATTaGCTGTCTGGCGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: ISSCRISAYSSTAWCSHIIKFKH*LSGETV
Trigger: AACAGTTTCGCCAGACAGCAAATGTTTGAATTTGAT...GATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp GGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATCAAATTCAAACATTaGCTGTCTGGCGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: GTIAKRALSQLGCCSKFFIKFKH*LSGETV
Trigger: AACAGTTTCGCCAGACAGCAAATGTTTGAATTTGAT...AAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp TCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCCTAAGCATCTTCTTCTTTaGCTGATGTCTTCGTATCAA +
Preference number: 5 (lower is better)
Translates to: SCRISAYSSTAWCSHIFPKHLLL*LMSSYQ
Trigger: TTGATACGAAGACATCAGCAAAAGAAGAAGATGCTT...AGGAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR CAA 90 bp CATCCTGTAGAATCTCAGCATATAGTAGCACTGCATGGTGCAGCCATATCTTTCAAGCATCTTCTTCTTTaGCTGATGTCTTCGTATCAA +
Preference number: 5 (lower is better)
Translates to: HPVESQHIVALHGAAISFKHLLL*LMSSYQ
Trigger: TTGATACGAAGACATCAGCAAAAGAAGAAGATGCTT...GAAAGATATGGCTGCACCATGCAGTGCTACTATATGCTGAGATTCTACAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000443327.5
CDS-3UTR CAA 90 bp GGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTCGTTCTGTTTTTCTTTaGCCTTTTCTACTAGTGGTA +
Preference number: 5 (lower is better)
Translates to: GTIAKRALSQLGCCSKFFRSVFL*PFLLVV
Trigger: TACCACTAGTAGAAAAGGCAAAAGAAAAACAGAACG...AAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp GGCACTATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTACACAGCTTACAAGCTaGAAACAATATTCCATTGAG +
Preference number: 5 (lower is better)
Translates to: GTIAKRALSQLGCCSKFFTQLTS*KQYSIE
Trigger: CTCAATGGAATATTGTTTCAAGCTTGTAAGCTGTGT...AAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAATAGTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTCCTTCTCTGTTGAATaGTTTTGCCACCTTTGTCGA +
Preference number: 5 (lower is better)
Translates to: YALHAHDAGREEVYESMHSFSVE*FCHLCR
Trigger: TCGACAAAGGTGGCAAAACAATTCAACAGAGAAGGA...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp GTGCCGCAGCTGTTGGCAAGGTTTTTGTTGATAATAACAGAAGTACATCCCTTAAGTATCACAAGGGATTaGCAATCACCAAAGAAGATG +
Preference number: 5 (lower is better)
Translates to: VPQLLARFLLIITEVHPLSITRD*QSPKKM
Trigger: CATCTTCTTTGGTGATTGCAAATCCCTTGTGATACT...TAAGGGATGTACTTCTGTTATTATCAACAAAAACCTTGCCAACAGCTGCGGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TTTCAGGCTCTCTCTTCTGTTCCATTGCTTTATTTGTCAATCCTAGTGCCAGTATTCCCGAGCAAATATTaGTCTGTTTTAGTGGCACAG +
Preference number: 5 (lower is better)
Translates to: FQALSSVPLLYLSILVPVFPSKY*SVLVAQ
Trigger: CTGTGCCACTAAAACAGACAAATATTTGCTCGGGAA...TACTGGCACTAGGATTGACAAATAAAGCAATGGAACAGAAGAGAGAGCCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp ACATTTATAGGTTCTAACCAAGTTCATTATAGCCATGCCGAGGGAGAATCACTTTCTCCTGGCTGCCACTaGAAAAGAAAAATTAACCCA +
Preference number: 5 (lower is better)
Translates to: TFIGSNQVHYSHAEGESLSPGCH*KRKINP
Trigger: TGGGTTAATTTTTCTTTTCAAGTGGCAGCCAGGAGA...AAGTGATTCTCCCTCGGCATGGCTATAATGAACTTGGTTAGAACCTATAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp CACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAATCTCCTGGCTGCCACTaGAAAAGAAAAATTAACCCA +
Preference number: 5 (lower is better)
Translates to: HYMHMMQVGKKFMNPCIKSPGCH*KRKINP
Trigger: TGGGTTAATTTTTCTTTTCAAGTGGCAGCCAGGAGA...TTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAACGAATCACATCTGAATaGCTCAGTGCCAAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHERITSE*LSAKPF
Trigger: GAAAGGCTTGGCACTGAGCAATTCAGATGTGATTCG...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp AAAGTGAGCAGTTCCCTAGGTACACCAATACTGTATGTTTGGATGGGAGTAATCCGTTCTGTTTTTCTTTaGCCTTTTCTACTAGTGGTA +
Preference number: 5 (lower is better)
Translates to: KVSSSLGTPILYVWMGVIRSVFL*PFLLVV
Trigger: TACCACTAGTAGAAAAGGCAAAAGAAAAACAGAACG...GATTACTCCCATCCAAACATACAGTATTGGTGTACCTAGGGAACTGCTCACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTTTCTGGCTCCATTTGTaGAAAAGACTTTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCIFWLHL*KRLSFS
Trigger: AGAGAAGGAAAGTCTTTTCAACAAATGGAGCCAGAA...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp GTTGTATTACATACTTATTATCTGTCTCACCATGAGAGCAGGGGCTTTTTCCTGCTATTCTGGCTCCATTaGTTGAAAAGACTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: VVLHTYYLSHHESRGFFLLFWLH*LKRLSF
Trigger: GAAGGAAAGTCTTTTCAACAAATGGAGCCAGAATAG...CAGGAAAAAGCCCCTGCTCTCATGGTGAGACAGATAATAAGTATGTAATACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp ACGAAATTTATTCAAATTGGCATAGAAAGACCCCCATCACCACTACCATCTTTTTCTCCTGGCTGCCACTaGAAAAGAAAAATTAACCCA +
Preference number: 5 (lower is better)
Translates to: TKFIQIGIERPPSPLPSFSPGCH*KRKINP
Trigger: TGGGTTAATTTTTCTTTTCAAGTGGCAGCCAGGAGA...AAAAGATGGTAGTGGTGATGGGGGTCTTTCTATGCCAATTTGAATAAATTTCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TTTATAGGTTCTAACCAAGTTCATTATAGCCATGCCGAGGGAGAATCACTTTTTCACACTCACTATGGCTaGAGTAGCACAAGCATTATT +
Preference number: 5 (lower is better)
Translates to: FIGSNQVHYSHAEGESLFHTHYG*SSTSII
Trigger: AATAATGCTTGTGCTACTCAAGCCATAGTGAGTGTG...AAAAAGTGATTCTCCCTCGGCATGGCTATAATGAACTTGGTTAGAACCTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp AAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTCACACTCACTATGGCTaGAGTAGCACAAGCATTATT +
Preference number: 5 (lower is better)
Translates to: KRALSQLGCCSKFFIHNGHTHYG*SSTSII
Trigger: AATAATGCTTGTGCTACTCAAGCCATAGTGAGTGTG...ACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATAAGCATCTTCTTCTTTaGCTGATGTCTTCGTATCAA +
Preference number: 5 (lower is better)
Translates to: YALHAHDAGREEVYESMHKHLLL*LMSSYQ
Trigger: TTGATACGAAGACATCAGCAAAAGAAGAAGATGCTT...ATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp ATGCACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAGCATCTTCTTCTTTaGCTGATGTCTTCGTATCAA +
Preference number: 5 (lower is better)
Translates to: MHYMHMMQVGKKFMNPCIKHLLL*LMSSYQ
Trigger: TTGATACGAAGACATCAGCAAAAGAAGAAGATGCTT...AATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp TTTCAGGCTCTCTCTTCTGTTCCATTGCTTTATTTGTCAATCCTAGTGCCAGTAACACAGCTTACAAGCTaGAAACAATATTCCATTGAG +
Preference number: 5 (lower is better)
Translates to: FQALSSVPLLYLSILVPVTQLTS*KQYSIE
Trigger: CTCAATGGAATATTGTTTCAAGCTTGTAAGCTGTGT...TACTGGCACTAGGATTGACAAATAAAGCAATGGAACAGAAGAGAGAGCCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp GAAGTAATCATGAAGTATCACAAGGGATTTGCAATCACCAAAGAAGATGCAGATAATTACATATGGCTCTaGAAAACTGCAGGCTGTACG +
Preference number: 5 (lower is better)
Translates to: EVIMKYHKGFAITKEDADNYIWL*KTAGCT
Trigger: CGTACAGCCTGCAGTTTTCAAGAGCCATATGTAATT...ATCTGCATCTTCTTTGGTGATTGCAAATCCCTTGTGATACTTCATGATTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp GTTGTATTACATACTTATTATCTGTCTCACCATGAGAGCAGGGGCTTTTTCCTGTCTTTAAAGTCTGACTaGCAAAGGAAGATTAGAAGC +
Preference number: 5 (lower is better)
Translates to: VVLHTYYLSHHESRGFFLSLKSD*QRKIRS
Trigger: GCTTCTAATCTTCCTTTGCAAGTCAGACTTTAAAGA...CAGGAAAAAGCCCCTGCTCTCATGGTGAGACAGATAATAAGTATGTAATACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCAAAGGGCAAGCTATCTaGGGAACTAAACATATAAGG +
Preference number: 5 (lower is better)
Translates to: RALSQLGCCSKFFIHNGFKGQAI*GTKHIR
Trigger: CCTTATATGTTTAGTTCCCAAGATAGCTTGCCCTTT...GAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CACTACATGCACATGATGCAGGTAGGGAAGAAGTTTATGAATCCATGCATTAAATTACCATGTCAGTCATaGGATTTAGGCCAGTTAACA +
Preference number: 5 (lower is better)
Translates to: HYMHMMQVGKKFMNPCIKLPCQS*DLGQLT
Trigger: TGTTAACTGGCCTAAATCCAATGACTGACATGGTAA...TTTAATGCATGGATTCATAAACTTCTTCCCTACCTGCATCATGTGCATGTAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS GCA 90 bp TCCATGGGTTCCTCTGCAAGTTGTCTTTGTAACTCTGCTATCTTCTaGTCATATATCATTTTTCTGTCAGACACAATGGCCATTAAATTA +
Preference number: 5 (lower is better)
Translates to: SMGSSASCLCNSAIF*SYIIFLSDTMAIKL
Trigger: TAATTTAATGGCCATTGTGTCTGACAGAAAAATGATATATGAGCAGAAGATAGCAGAGTTACAAAGACAACTTGCAGAGGAACCCATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000367451.8
ENST00000367454.6
ENST00000416915.1
ENST00000421683.1
ENST00000449480.5
CDS GCA 90 bp ATGGGTTCCTCCTCTGCAAGTTGTCTTTGTAACTCTGCTATCTTCTaGTCATATATCATTTTTCTGTCAGACACAATGGCCATTAAATTA +
Preference number: 5 (lower is better)
Translates to: MGSSSASCLCNSAIF*SYIIFLSDTMAIKL
Trigger: TAATTTAATGGCCATTGTGTCTGACAGAAAAATGATATATGAGCAGAAGATAGCAGAGTTACAAAGACAACTTGCAGAGGAGGAACCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367455.8
ENST00000420791.5
ENST00000443327.5
CDS-3UTR CAA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAATCTCCTGGCTGCCACTaGAAAAGAAAAATTAACCCA +
Preference number: 5 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHESPGCH*KRKINP
Trigger: TGGGTTAATTTTTCTTTTCAAGTGGCAGCCAGGAGA...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp TCATCACAGATTATAGGCAACTGCCTCAGCTATTCAAAAATCTCATCCTGTAGAATCAAATTCAAACATTaGCTGTCTGGCGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: SSQIIGNCLSYSKISSCRIKFKH*LSGETV
Trigger: AACAGTTTCGCCAGACAGCAAATGTTTGAATTTGAT...TCTACAGGATGAGATTTTTGAATAGCTGAGGCAGTTGCCTATAATCTGTGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367448.5
ENST00000367449.5
CDS-3UTR CAA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATATCAAATTCAAACATTaGCTGTCTGGCGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHIKFKH*LSGETV
Trigger: AACAGTTTCGCCAGACAGCAAATGTTTGAATTTGAT...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATCGTTCTGTTTTTCTTTaGCCTTTTCTACTAGTGGTA +
Preference number: 5 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHRSVFL*PFLLVV
Trigger: TACCACTAGTAGAAAAGGCAAAAGAAAAACAGAACG...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCTCTCTTCTGTTCCATaGCTTTATTTGTCAATCCTA +
Preference number: 5 (lower is better)
Translates to: RALSQLGCCSKFFIHNGFLSSVP*LYLSIL
Trigger: TAGGATTGACAAATAAAGCAATGGAACAGAAGAGAG...GAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp AAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTGACTTTCCTTCTCTGTaGAATTGTTTTGCCACCTTT +
Preference number: 5 (lower is better)
Translates to: KRALSQLGCCSKFFIHNGDFPSL*NCFATF
Trigger: AAAGGTGGCAAAACAATTCAACAGAGAAGGAAAGTC...ACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp ACGAAATTTATTCAAATTGGCATAGAAAGACCCCCATCACCACTACCATCTTTTAAAGGGCAAGCTATCTaGGGAACTAAACATATAAGG +
Preference number: 5 (lower is better)
Translates to: TKFIQIGIERPPSPLPSFKGQAI*GTKHIR
Trigger: CCTTATATGTTTAGTTCCCAAGATAGCTTGCCCTTT...AAAAGATGGTAGTGGTGATGGGGGTCTTTCTATGCCAATTTGAATAAATTTCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp CGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCTTAATTATTGCACATaGGTTCTGCCTATATGCCTA +
Preference number: 5 (lower is better)
Translates to: RALSQLGCCSKFFIHNGFLNYCT*VLPICL
Trigger: TAGGCATATAGGCAGAACCAATGTGCAATAATTAAG...GAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS-3UTR CAA 90 bp ATTGCCAAACGTGCACTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATCGTTCTGTTTTTCTTTaGCCATGTATTCTCGTCTTT +
Preference number: 5 (lower is better)
Translates to: IAKRALSQLGCCSKFFIHRSVFL*PCILVF
Trigger: AAAGACGAGAATACATGGCAAAAGAAAAACAGAACG...ATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAGTGCACGTTTGGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420791.5
ENST00000449480.5
CDS-3UTR CAA 90 bp CAGAAAACTAACAGTTGTCAGACTCAATGTCAAATAATGGAATTTGGGAAAGCAGACTTTCCTTCTCTGTaGAATTGTTTTGCCACCTTT +
Preference number: 5 (lower is better)
Translates to: QKTNSCQTQCQIMEFGKADFPSL*NCFATF
Trigger: AAAGGTGGCAAAACAATTCAACAGAGAAGGAAAGTC...TGCTTTCCCAAATTCCATTATTTGACATTGAGTCTGACAACTGTTAGTTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS GCA 90 bp GTCTTCTCAAAGTGTTTCTCAAACTTTTCTACTAGTGGTATTAACTaGTGGTGTTCTGCTAAAGTCTTTAACAATTCCATAATGAAAGGC +
Preference number: 5 (lower is better)
Translates to: VFSKCFSNFSTSGIN*WCSAKVFNNSIMKG
Trigger: GCCTTTCATTATGGAATTGTTAAAGACTTTAGCAGAACACCAGCAGTTAATACCACTAGTAGAAAAGTTTGAGAAACACTTTGAGAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367448.5
ENST00000420791.5
ENST00000443327.5
ENST00000449480.5
CDS GCA 90 bp ATCCTTCCCCTATATCAGAATATCTTTTCTACTAGTGGTATTAACTaGTGGTGTTCTGCTAAAGTCTTTAACAATTCCATAATGAAAGGC +
Preference number: 5 (lower is better)
Translates to: ILPLYQNIFSTSGIN*WCSAKVFNNSIMKG
Trigger: GCCTTTCATTATGGAATTGTTAAAGACTTTAGCAGAACACCAGCAGTTAATACCACTAGTAGAAAAGATATTCTGATATAGGGGAAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416915.1
CDS CCA 90 bp CTTCCCCTATATCAGAATATCTTTTCTACTAGTGGTATTAACTGCTaGTGTTCTGCTAAAGTCTTTAACAATTCCATAATGAAAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LPLYQNIFSTSGINC*CSAKVFNNSIMKGR
Trigger: TCTGCCTTTCATTATGGAATTGTTAAAGACTTTAGCAGAACACCAGCAGTTAATACCACTAGTAGAAAAGATATTCTGATATAGGGGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416915.1
CDS-3UTR CAA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAAATCAAATTCAAACATTaGCTGTCTGGCGAAACTGTT +
Preference number: 5 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHEIKFKH*LSGETV
Trigger: AACAGTTTCGCCAGACAGCAAATGTTTGAATTTGAT...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp CTGAGCCAATTAGGATGTTGCTCTAAGTTCTTTATACATAATGGTTTCCATGAAAAGCATCTTCTTCTTTaGCTGATGTCTTCGTATCAA +
Preference number: 5 (lower is better)
Translates to: LSQLGCCSKFFIHNGFHEKHLLL*LMSSYQ
Trigger: TTGATACGAAGACATCAGCAAAAGAAGAAGATGCTT...TTCATGGAAACCATTATGTATAAAGAACTTAGAGCAACATCCTAATTGGCTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
CDS-3UTR CAA 90 bp CAGAAAACTAACAGTTGTCAGACTCAATGTCAAATAATGGAATTTGGGAAAGCATCTTTAAAGTCTGACTaGCAAAGGAAGATTAGAAGC +
Preference number: 5 (lower is better)
Translates to: QKTNSCQTQCQIMEFGKASLKSD*QRKIRS
Trigger: GCTTCTAATCTTCCTTTGCAAGTCAGACTTTAAAGA...TGCTTTCCCAAATTCCATTATTTGACATTGAGTCTGACAACTGTTAGTTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367454.6
ENST00000367455.8
CDS TCA 72 bp CCGACAGCCTCCGGGCGCCGTCACCTGCAGCGCGACTaGGCGCGGGAGGACGCTCTAGCCACCCTAGAGACA +
Preference number: 6 (lower is better)
Translates to: PTASGRRHLQRD*AREDALATLET
Trigger: TGTCTCTAGGGTGGCTAGAGCGTCCTCCCGCGCTCAGTCGCGCTGCAGGTGACGGCGCCCGGAGGCTGTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367455.8
CDS GCA 72 bp CTTCTCCTGGCGGCGCTGCGGATCCAGGGGGTCGGCTaGCAGGTACAGGTGAGGACATTGCGGGAGGCCGGC +
Preference number: 6 (lower is better)
Translates to: LLLAALRIQGVG*QVQVRTLREAG
Trigger: GCCGGCCTCCCGCAATGTCCTCACCTGTACCTGGCAGCCGACCCCCTGGATCCGCAGCGCCGCCAGGAGAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS GCA 72 bp CTCAGGGTGGGCCCTTTCCGAAGCCGGGACCGCTCCTaGTTGTCGGCATCGCTCCCCACAGGCCGACGTCGA +
Preference number: 6 (lower is better)
Translates to: LRVGPFRSRDRS*LSASLPTGRRR
Trigger: TCGACGTCGGCCTGTGGGGAGCGATGCCGACAAGCAGGAGCGGTCCCGGCTTCGGAAAGGGCCCACCCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS CAA 72 bp AGGGTGGGCCCTTTCCGAAGCCGGGACCGCTCCTGCTaGTCGGCATCGCTCCCCACAGGCCGACGTCGAGAG +
Preference number: 6 (lower is better)
Translates to: RVGPFRSRDRSC*SASLPTGRRRE
Trigger: CTCTCGACGTCGGCCTGTGGGGAGCGATGCCGACAAGCAGGAGCGGTCCCGGCTTCGGAAAGGGCCCACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS TCA 72 bp CGCTGCGGATCCAGGGGGTCGGCTGCCAGGTACAGGTaGGGACATTGCGGGAGGCCGGCTGGGAGCCTTTTG +
Preference number: 6 (lower is better)
Translates to: RCGSRGSAARYR*GHCGRPAGSLL
Trigger: CAAAAGGCTCCCAGCCGGCCTCCCGCAATGTCCTCACCTGTACCTGGCAGCCGACCCCCTGGATCCGCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS CCA 72 bp CTTTTGTCGTTTCCCAGCGCTGCGCAGGACTTCTCCTaGCGGCGCTGCGGATCCAGGGGGTCGGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: LLSFPSAAQDFS*RRCGSRGSAAR
Trigger: CCTGGCAGCCGACCCCCTGGATCCGCAGCGCCGCCAGGAGAAGTCCTGCGCAGCGCTGGGAAACGACAAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS CAA 72 bp ATCCAGGGGGTCGGCTGCCAGGTACAGGTGAGGACATaGCGGGAGGCCGGCTGGGAGCCTTTTGTGCGGCCC +
Preference number: 6 (lower is better)
Translates to: IQGVGCQVQVRT*REAGWEPFVRP
Trigger: GGGCCGCACAAAAGGCTCCCAGCCGGCCTCCCGCAATGTCCTCACCTGTACCTGGCAGCCGACCCCCTGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS GCA 72 bp CCCGTCAGGCTGCCTTCTTTTGTCGTTTCCCAGCGCTaGGCAGGACTTCTCCTGGCGGCGCTGCGGATCCAG +
Preference number: 6 (lower is better)
Translates to: PVRLPSFVVSQR*AGLLLAALRIQ
Trigger: CTGGATCCGCAGCGCCGCCAGGAGAAGTCCTGCGCAGCGCTGGGAAACGACAAAAGAAGGCAGCCTGACGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS CCA 72 bp TGCCAGGTACAGGTGAGGACATTGCGGGAGGCCGGCTaGGAGCCTTTTGTGCGGCCCCAGGGACGCGCAAAT +
Preference number: 6 (lower is better)
Translates to: CQVQVRTLREAG*EPFVRPQGRAN
Trigger: ATTTGCGCGTCCCTGGGGCCGCACAAAAGGCTCCCAGCCGGCCTCCCGCAATGTCCTCACCTGTACCTGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS GCA 72 bp CGGCAGTGGGGCTGTTGCTGTTGCTGTGGCTGTCGCTaGCCGTCAGGCTGCCTTCTTTTGTCGTTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: RQWGCCCCCGCR*PSGCLLLSFPS
Trigger: GCTGGGAAACGACAAAAGAAGGCAGCCTGACGGGCAGCGACAGCCACAGCAACAGCAACAGCCCCACTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417752.1
CDS TCA 72 bp TCTGGCGAAACTGTTGTGTACTTGTCGAATCACATCTaGATTGCTCAGTGCCAAGCCTTTCATAGCTGCATC +
Preference number: 6 (lower is better)
Translates to: SGETVVYLSNHI*IAQCQAFHSCI
Trigger: GATGCAGCTATGAAAGGCTTGGCACTGAGCAATTCAGATGTGATTCGACAAGTACACAACAGTTTCGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000420791.5
ENST00000421683.1
CDS TCA 72 bp TGGTGGGTACAGTTCAGTAACACACTCACTATGGCTTaGGTAGCACAAGCATTATTAATTACCTGCTTAGCA +
Preference number: 6 (lower is better)
Translates to: WWVQFSNTLTMA*VAQALLITCLA
Trigger: TGCTAAGCAGGTAATTAATAATGCTTGTGCTACTCAAGCCATAGTGAGTGTGTTACTGAACTGTACCCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367448.5
ENST00000367449.5
ENST00000367450.7
ENST00000367451.8
ENST00000367454.6
ENST00000367455.8
ENST00000421683.1