Pregenerated sensors for UCA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000214049Ensembl transcript IDs: ENST00000397381.6, ENST00000589333.3, ENST00000600160.3, ENST00000642256.2, ENST00000642269.1, ENST00000642440.2, ENST00000642894.1, ENST00000643552.1, ENST00000643567.1, ENST00000643818.1, ENST00000643846.1, ENST00000644103.1, ENST00000644174.2, ENST00000644400.1, ENST00000644502.1, ENST00000644567.2, ENST00000644590.1, ENST00000644730.1, ENST00000644796.2, ENST00000644845.2, ENST00000644962.1, ENST00000645156.1, ENST00000645177.1, ENST00000645221.1, ENST00000645251.1, ENST00000645389.2, ENST00000645708.2, ENST00000645764.1, ENST00000645805.1, ENST00000645821.2, ENST00000645877.1, ENST00000646128.1, ENST00000646397.1, ENST00000646494.1, ENST00000647185.1, ENST00000647292.1, ENST00000655191.1, ENST00000655708.1, ENST00000658824.1, ENST00000659568.1, ENST00000664784.1, ENST00000665604.1, ENST00000666830.1, ENST00000670862.1, ENST00000671188.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGGAACGGATGAAGCCTGCTTGGAAGCATGCTGGGATGGCCATTTaGAAGGAGTGTTGCAAGGAAGCATGGCCTTGGCTGGGCGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: EERMKPAWKHAGMAI*KECCKEAWPWLGAA Trigger: GGCAGCGCCCAGCCAAGGCCATGCTTCCTTGCAACACTCCTTCCAAATGGCCATCCCAGCATGCTTCCAAGCAGGCTTCATCCGTTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 33 transcripts: ENST00000397381.6 ENST00000589333.3 ENST00000600160.3 ENST00000642256.2 ENST00000642269.1 ENST00000642894.1 ENST00000643552.1 ENST00000643818.1 ENST00000643846.1 ENST00000644103.1 ENST00000644174.2 ENST00000644400.1 ENST00000644502.1 ENST00000644567.2 ENST00000644730.1 ENST00000644845.2 ENST00000644962.1 ENST00000645156.1 ENST00000645177.1 ENST00000645221.1 ENST00000645251.1 ENST00000645389.2 ENST00000645708.2 ENST00000645805.1 ENST00000646128.1 ENST00000646397.1 ENST00000646494.1 ENST00000647185.1 ENST00000655191.1 ENST00000655708.1 ENST00000659568.1 ENST00000666830.1 ENST00000670862.1 |
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| CDS TCA 90 bp | GCCACTAAGCCGAGGAGATCTGGGAAGGAGTCAGCCAGAGAGCTTTaGGCCAGAGCTCCAGGGACCCTAGAAGGGGCCGATTTGAAATTG | + |
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Preference number: 5 (lower is better) Translates to: ATKPRRSGKESAREL*ARAPGTLEGADLKL Trigger: CAATTTCAAATCGGCCCCTTCTAGGGTCCCTGGAGCTCTGGCTCAAAGCTCTCTGGCTGACTCCTTCCCAGATCTCCTCGGCTTAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000643552.1 ENST00000645389.2 ENST00000646397.1 ENST00000664784.1 |
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| CDS TCA 90 bp | GCTAGGGTGTCTTCATATGGCTGGGAATCCGAAGCTCGGCATCTGTaGTGGTCCAAGGGGCTTCTGAGGCGATCGGGCAGCATCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: ARVSSYGWESEARHL*WSKGLLRRSGSISL Trigger: AAGACTGATGCTGCCCGATCGCCTCAGAAGCCCCTTGGACCATCACAGATGCCGAGCTTCGGATTCCCAGCCATATGAAGACACCCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644962.1 ENST00000645708.2 |
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| CDS TCA 90 bp | TTGGCTGGGCGCTGCCAGGAGCTTAAGGGTTGTAGGTTGTTTGTCTaGTCGGCTCTCGGCCTAATCTTGTGGCTTCCAGGAGGAAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: LAGRCQELKGCRLFV*SALGLILWLPGGRG Trigger: TCCTCTTCCTCCTGGAAGCCACAAGATTAGGCCGAGAGCCGATCAGACAAACAACCTACAACCCTTAAGCTCCTGGCAGCGCCCAGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 33 transcripts: ENST00000397381.6 ENST00000589333.3 ENST00000600160.3 ENST00000642256.2 ENST00000642269.1 ENST00000642894.1 ENST00000643552.1 ENST00000643818.1 ENST00000643846.1 ENST00000644103.1 ENST00000644174.2 ENST00000644400.1 ENST00000644502.1 ENST00000644567.2 ENST00000644730.1 ENST00000644845.2 ENST00000644962.1 ENST00000645156.1 ENST00000645177.1 ENST00000645221.1 ENST00000645251.1 ENST00000645389.2 ENST00000645708.2 ENST00000645805.1 ENST00000646128.1 ENST00000646397.1 ENST00000646494.1 ENST00000647185.1 ENST00000655191.1 ENST00000655708.1 ENST00000659568.1 ENST00000666830.1 ENST00000670862.1 |
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| CDS TCA 90 bp | GCCACTAAGCCGAGGAGATCTGGGAAGGAGTCAGCCAGAGAGCTTTaGGCCAGAGCTCCAGGGACCCTAGAAGGGGCTGTGATATTAGTT | + |
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Preference number: 5 (lower is better) Translates to: ATKPRRSGKESAREL*ARAPGTLEGAVILV Trigger: AACTAATATCACAGCCCCTTCTAGGGTCCCTGGAGCTCTGGCTCAAAGCTCTCTGGCTGACTCCTTCCCAGATCTCCTCGGCTTAGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS CCA 90 bp | GTGGTTTTTCGGCTGCTCCAGACTTCTTGGCTCCTGCAGGCCACCTaGACGGATATGTGCAGGTCACAGGGGTTACAATGGCTAAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: VVFRLLQTSWLLQAT*TDMCRSQGLQWLSF Trigger: GAAGCTTAGCCATTGTAACCCCTGTGACCTGCACATATCCGTCCAGGTGGCCTGCAGGAGCCAAGAAGTCTGGAGCAGCCGAAAAACCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000397381.6 ENST00000644174.2 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000645805.1 ENST00000647292.1 ENST00000655191.1 ENST00000655708.1 ENST00000665604.1 ENST00000666830.1 ENST00000671188.1 |
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| CDS TCA 90 bp | AATGGAGAGGGTCCTGCAGATGGACGGCAGTTGGTGTGCTATAAATaGCCGGGTAGGGTCTGGTCCATTGAGGCTGTAGAGTTTGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: NGEGPADGRQLVCYK*PGRVWSIEAVEFEG Trigger: CCCCTCAAACTCTACAGCCTCAATGGACCAGACCCTACCCGGTCATTTATAGCACACCAACTGCCGTCCATCTGCAGGACCCTCTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 29 transcripts: ENST00000589333.3 ENST00000600160.3 ENST00000642256.2 ENST00000642269.1 ENST00000642894.1 ENST00000643552.1 ENST00000643818.1 ENST00000644103.1 ENST00000644174.2 ENST00000644400.1 ENST00000644502.1 ENST00000644567.2 ENST00000644590.1 ENST00000644730.1 ENST00000644845.2 ENST00000644962.1 ENST00000645156.1 ENST00000645177.1 ENST00000645221.1 ENST00000645389.2 ENST00000645708.2 ENST00000645805.1 ENST00000646397.1 ENST00000646494.1 ENST00000647185.1 ENST00000655708.1 ENST00000659568.1 ENST00000666830.1 ENST00000670862.1 |
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| CDS TCA 90 bp | AGATCAAGCTGGCTGTCTGATGGGCATGGCTTTATTCTGGAATGGTaGACCCAATGGAGAGGGTCCTGCAGATGGACGGCAGTTGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: RSSWLSDGHGFILEW*TQWRGSCRWTAVGV Trigger: CACACCAACTGCCGTCCATCTGCAGGACCCTCTCCATTGGGTTCACCATTCCAGAATAAAGCCATGCCCATCAGACAGCCAGCTTGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 30 transcripts: ENST00000589333.3 ENST00000600160.3 ENST00000642256.2 ENST00000642269.1 ENST00000642894.1 ENST00000643552.1 ENST00000643818.1 ENST00000643846.1 ENST00000644103.1 ENST00000644174.2 ENST00000644400.1 ENST00000644502.1 ENST00000644567.2 ENST00000644730.1 ENST00000644845.2 ENST00000644962.1 ENST00000645156.1 ENST00000645177.1 ENST00000645221.1 ENST00000645251.1 ENST00000645389.2 ENST00000645708.2 ENST00000645805.1 ENST00000646397.1 ENST00000646494.1 ENST00000647185.1 ENST00000655708.1 ENST00000659568.1 ENST00000666830.1 ENST00000670862.1 |
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| CDS TCA 90 bp | AGATCAAGCTGGCTGTCTGATGGGCATGGCTTTATTCTGGAATGGTaGACCCAATGGAGAGGGTCCCTCCACCGTAAGAGTTACCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: RSSWLSDGHGFILEW*TQWRGSLHRKSYPK Trigger: CTTCGGGTAACTCTTACGGTGGAGGGACCCTCTCCATTGGGTTCACCATTCCAGAATAAAGCCATGCCCATCAGACAGCCAGCTTGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397381.6 ENST00000646128.1 ENST00000655191.1 |
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| CDS TCA 90 bp | AGGGTCTGGTCCATTGAGGCTGTAGAGTTTGAGGGGTCAGACTTTTaGCAAGGACTGATCGTCCAGCTAGGGTGTCTTCATATGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: RVWSIEAVEFEGSDF*QGLIVQLGCLHMAG Trigger: CCCAGCCATATGAAGACACCCTAGCTGGACGATCAGTCCTTGTCAAAAGTCTGACCCCTCAAACTCTACAGCCTCAATGGACCAGACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 29 transcripts: ENST00000589333.3 ENST00000600160.3 ENST00000642256.2 ENST00000642269.1 ENST00000642894.1 ENST00000643552.1 ENST00000643818.1 ENST00000644103.1 ENST00000644174.2 ENST00000644400.1 ENST00000644502.1 ENST00000644567.2 ENST00000644590.1 ENST00000644730.1 ENST00000644845.2 ENST00000644962.1 ENST00000645156.1 ENST00000645177.1 ENST00000645221.1 ENST00000645389.2 ENST00000645708.2 ENST00000645805.1 ENST00000646397.1 ENST00000646494.1 ENST00000647185.1 ENST00000655708.1 ENST00000659568.1 ENST00000666830.1 ENST00000670862.1 |
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| CDS TCA 90 bp | AGGCCACCTGGACATATATGTGCAGGTCACAGGGGTTACAATGGCTaGGCTTCGGCTCAGAGGCCTGACAGTTCCCTTTTGGAAACGTTA | + |
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Preference number: 5 (lower is better) Translates to: RPPGHICAGHRGYNG*ASAQRPDSSLLETL Trigger: TAACGTTTCCAAAAGGGAACTGTCAGGCCTCTGAGCCGAAGCTCAGCCATTGTAACCCCTGTGACCTGCACATATATGTCCAGGTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000644174.2 ENST00000644567.2 |
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| CDS GCA 90 bp | GTTAAGGCAGGAACTGGCTGTTTCACTTCTTTGTGGTTTTTCGGCTaGTCCAGACTTCTTGGCTCCTGCAGGCCACCCTTTTCCCATAGG | + |
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Preference number: 5 (lower is better) Translates to: VKAGTGCFTSLWFFG*SRLLGSCRPPFSHR Trigger: CCTATGGGAAAAGGGTGGCCTGCAGGAGCCAAGAAGTCTGGAGCAGCCGAAAAACCACAAAGAAGTGAAACAGCCAGTTCCTGCCTTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000642440.2 ENST00000644400.1 |
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| CDS CCA 90 bp | AAAGGTGGTTATCCTCAGCAGAGGAGGGGGTCACAAGGTGCATGGTaGAGAGATGATGGGACTCATTGTCCAGGAGAAGAATGTCACAGG | + |
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Preference number: 5 (lower is better) Translates to: KGGYPQQRRGSQGAW*RDDGTHCPGEECHR Trigger: CCTGTGACATTCTTCTCCTGGACAATGAGTCCCATCATCTCTCCACCATGCACCTTGTGACCCCCTCCTCTGCTGAGGATAACCACCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000397381.6 ENST00000642440.2 ENST00000644174.2 ENST00000644400.1 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000645805.1 ENST00000647292.1 ENST00000655191.1 ENST00000655708.1 ENST00000665604.1 ENST00000666830.1 ENST00000671188.1 |
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| CDS TCA 90 bp | CCTGTCACGCGTGTCCGTATAGAAGACACCCAATCAGGCTTTGTGTaGGCAACAAGGCTGTTAATTCACTTGGGTGCAAGTGGGCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: PVTRVRIEDTQSGFV*ATRLLIHLGASGLS Trigger: ACTCAGCCCACTTGCACCCAAGTGAATTAACAGCCTTGTTGCTCACACAAAGCCTGATTGGGTGTCTTCTATACGGACACGCGTGACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000397381.6 ENST00000642440.2 ENST00000644174.2 ENST00000644400.1 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000647292.1 ENST00000655191.1 ENST00000666830.1 |
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| CDS TCA 90 bp | CTGTTGTCAGCAGAGGAGGGAGTCACAAGGTGCATGGTGGAGAGATaGTGGGACTCATTGTCCAGAAGAATGTCACAGGGTCGATTGATC | + |
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Preference number: 5 (lower is better) Translates to: LLSAEEGVTRCMVER*WDSLSRRMSQGRLI Trigger: GATCAATCGACCCTGTGACATTCTTCTGGACAATGAGTCCCATCATCTCTCCACCATGCACCTTGTGACTCCCTCCTCTGCTGACAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000644174.2 ENST00000644567.2 ENST00000645764.1 ENST00000645805.1 |
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| CDS CCA 90 bp | GTTAAAGGTGGTTATCCTCAGCAGAGGAGGGGGTCACAAGGTGCATaGTGGAGAGATGATGGGACTCATTGTCCAGGAGAAGAATGTCAC | + |
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Preference number: 5 (lower is better) Translates to: VKGGYPQQRRGSQGA*WRDDGTHCPGEECH Trigger: GTGACATTCTTCTCCTGGACAATGAGTCCCATCATCTCTCCACCATGCACCTTGTGACCCCCTCCTCTGCTGAGGATAACCACCTTTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000397381.6 ENST00000642440.2 ENST00000644174.2 ENST00000644400.1 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000645805.1 ENST00000647292.1 ENST00000655191.1 ENST00000655708.1 ENST00000665604.1 ENST00000666830.1 ENST00000671188.1 |
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| CDS CCA 90 bp | GTGGTTATCTGTTGTCAGCAGAGGAGGGAGTCACAAGGTGCATGGTaGAGAGATGATGGGACTCATTGTCCAGAAGAATGTCACAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: VVICCQQRRESQGAW*RDDGTHCPEECHRV Trigger: GACCCTGTGACATTCTTCTGGACAATGAGTCCCATCATCTCTCCACCATGCACCTTGTGACTCCCTCCTCTGCTGACAACAGATAACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000643567.1 ENST00000644174.2 ENST00000644567.2 ENST00000645764.1 ENST00000645805.1 ENST00000645877.1 ENST00000670862.1 |
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| CDS TCA 90 bp | CATGGCTGGGGTTTGTCTTACAGCAGAGGCAAGCAATTGCAGCTCTaGAAGACGTTGCTGCTTGGCTGCCTCTTCTCTATTGTTGAACAC | + |
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Preference number: 5 (lower is better) Translates to: HGWGLSYSRGKQLQL*KTLLLGCLFSIVEH Trigger: GTGTTCAACAATAGAGAAGAGGCAGCCAAGCAGCAACGTCTTTCAGAGCTGCAATTGCTTGCCTCTGCTGTAAGACAAACCCCAGCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS CCA 90 bp | AAGGTGGTTATCTGTTGTCAGCAGAGGAGGGAGTCACAAGGTGCATaGTGGAGAGATGATGGGACTCATTGTCCAGAAGAATGTCACAGG | + |
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Preference number: 5 (lower is better) Translates to: KVVICCQQRRESQGA*WRDDGTHCPEECHR Trigger: CCTGTGACATTCTTCTGGACAATGAGTCCCATCATCTCTCCACCATGCACCTTGTGACTCCCTCCTCTGCTGACAACAGATAACCACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000643567.1 ENST00000644174.2 ENST00000644567.2 ENST00000645764.1 ENST00000645805.1 ENST00000645877.1 ENST00000670862.1 |
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| CDS TCA 90 bp | AGAGATGATGGGACTCATTGTCCAGAAGAATGTCACAGGGTCGATTaGTCAGTTGGGGCAGGGCAGGAACACGTCATAATGGTGGAATGT | + |
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Preference number: 5 (lower is better) Translates to: RDDGTHCPEECHRVD*SVGAGQEHVIMVEC Trigger: ACATTCCACCATTATGACGTGTTCCTGCCCTGCCCCAACTGATCAATCGACCCTGTGACATTCTTCTGGACAATGAGTCCCATCATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000644174.2 ENST00000644567.2 ENST00000645764.1 ENST00000645805.1 |
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| CDS GCA 90 bp | TGTCTTACAGCAGAGGCAAGCAATTGCAGCTCTGAAAGACGTTGCTaGTTGGCTGCCTCTTCTCTATTGTTGAACACCTTGAAGGCGAGA | + |
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Preference number: 5 (lower is better) Translates to: CLTAEASNCSSERRC*LAASSLLLNTLKAR Trigger: TCTCGCCTTCAAGGTGTTCAACAATAGAGAAGAGGCAGCCAAGCAGCAACGTCTTTCAGAGCTGCAATTGCTTGCCTCTGCTGTAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS TCA 90 bp | GAAGATAGTTGCCCAGGGGGCTGGTGTCTGGAACAAGATTGTGGCTaGGTAAGAAGGTGCATCCATATAAAATTGAAATGGGTTGTACCC | + |
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Preference number: 5 (lower is better) Translates to: EDSCPGGWCLEQDCG*VRRCIHIKLKWVVP Trigger: GGGTACAACCCATTTCAATTTTATATGGATGCACCTTCTTACTCAGCCACAATCTTGTTCCAGACACCAGCCCCCTGGGCAACTATCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000600160.3 ENST00000644590.1 |
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| CDS TCA 72 bp | GAGGACCCGAGGTCGCAGGTGGATCTCTTCACGGAATaGGGGCCAGGACAGGGGGCCGGTCTCACGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: EDPRSQVDLFTE*GPGQGAGLTKE Trigger: CTCCTTCGTGAGACCGGCCCCCTGTCCTGGCCCTCATTCCGTGAAGAGATCCACCTGCGACCTCGGGTCCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 41 transcripts: ENST00000397381.6 ENST00000642256.2 ENST00000642440.2 ENST00000642894.1 ENST00000643552.1 ENST00000643567.1 ENST00000643818.1 ENST00000643846.1 ENST00000644103.1 ENST00000644174.2 ENST00000644400.1 ENST00000644502.1 ENST00000644567.2 ENST00000644590.1 ENST00000644730.1 ENST00000644796.2 ENST00000644845.2 ENST00000644962.1 ENST00000645177.1 ENST00000645221.1 ENST00000645251.1 ENST00000645389.2 ENST00000645708.2 ENST00000645764.1 ENST00000645805.1 ENST00000645821.2 ENST00000645877.1 ENST00000646128.1 ENST00000646397.1 ENST00000646494.1 ENST00000647185.1 ENST00000647292.1 ENST00000655191.1 ENST00000655708.1 ENST00000658824.1 ENST00000659568.1 ENST00000664784.1 ENST00000665604.1 ENST00000666830.1 ENST00000670862.1 ENST00000671188.1 |
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| CDS GCA 72 bp | CGCACAGGTGGGACAGGCTTAGGAGGAATCCCGGGCTaGAGGCATTCCTTGGCCCAGTGGCCAGTTTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: RTGGTGLGGIPG*RHSLAQWPVLR Trigger: CCGCAAAACTGGCCACTGGGCCAAGGAATGCCTGCAGCCCGGGATTCCTCCTAAGCCTGTCCCACCTGTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS CCA 72 bp | GTTCCTTGGGCTGGTCTGAGGACCCGAGGTCGCAGGTaGATCTCTTCACGGAATGAGGGCCAGGACAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: VPWAGLRTRGRR*ISSRNEGQDRG Trigger: CCCCCTGTCCTGGCCCTCATTCCGTGAAGAGATCCACCTGCGACCTCGGGTCCTCAGACCAGCCCAAGGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 41 transcripts: ENST00000397381.6 ENST00000642256.2 ENST00000642440.2 ENST00000642894.1 ENST00000643552.1 ENST00000643567.1 ENST00000643818.1 ENST00000643846.1 ENST00000644103.1 ENST00000644174.2 ENST00000644400.1 ENST00000644502.1 ENST00000644567.2 ENST00000644590.1 ENST00000644730.1 ENST00000644796.2 ENST00000644845.2 ENST00000644962.1 ENST00000645177.1 ENST00000645221.1 ENST00000645251.1 ENST00000645389.2 ENST00000645708.2 ENST00000645764.1 ENST00000645805.1 ENST00000645821.2 ENST00000645877.1 ENST00000646128.1 ENST00000646397.1 ENST00000646494.1 ENST00000647185.1 ENST00000647292.1 ENST00000655191.1 ENST00000655708.1 ENST00000658824.1 ENST00000659568.1 ENST00000664784.1 ENST00000665604.1 ENST00000666830.1 ENST00000670862.1 ENST00000671188.1 |
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| CDS TCA 72 bp | CCGAGGAGATCTGGGAAGGAGTCAGCCAGAGAGCTTTaGGCCAGAGCTCCAGGGACCCTAGAAGGGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PRRSGKESAREL*ARAPGTLEGAV Trigger: CACAGCCCCTTCTAGGGTCCCTGGAGCTCTGGCTCAAAGCTCTCTGGCTGACTCCTTCCCAGATCTCCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS TCA 72 bp | CCGAGGAGATCTGGGAAGGAGTCAGCCAGAGAGCTTTaGGCCAGAGCTCCAGGGACCCTAGAAGGGGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: PRRSGKESAREL*ARAPGTLEGAD Trigger: ATCGGCCCCTTCTAGGGTCCCTGGAGCTCTGGCTCAAAGCTCTCTGGCTGACTCCTTCCCAGATCTCCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000643552.1 ENST00000645389.2 ENST00000646397.1 ENST00000664784.1 |
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| CDS CCA 72 bp | CGGCTGCTCCAGACTTCTTGGCTCCTGCAGGCCACCTaGACGGATATGTGCAGGTCACAGGGGTTACAATGG | + |
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Preference number: 6 (lower is better) Translates to: RLLQTSWLLQAT*TDMCRSQGLQW Trigger: CCATTGTAACCCCTGTGACCTGCACATATCCGTCCAGGTGGCCTGCAGGAGCCAAGAAGTCTGGAGCAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000397381.6 ENST00000644174.2 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000645805.1 ENST00000647292.1 ENST00000655191.1 ENST00000655708.1 ENST00000665604.1 ENST00000666830.1 ENST00000671188.1 |
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| CDS CAA 90 bp | AGCCAGAGAGCTTTGAGCCAGAGCTCCAGGGACCCCGATTTGAAATaGGTGAGATGTTCCTTGGGCTGGTCTGAGGACCCGAGGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SQRALSQSSRDPDLK*VRCSLGWSEDPRSQ Trigger: CTGCGACCTCGGGTCCTCAGACCAGCCCAAGGAACATCTCACCAATTTCAAATCGGGGTCCCTGGAGCTCTGGCTCAAAGCTCTCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000642256.2 ENST00000644845.2 ENST00000645821.2 ENST00000646128.1 |
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| CDS CAA 90 bp | GGAGTCAGCCAGAGAGCTTTGAGCCAGAGCTCCAGGGACCCCGATTaGAAATTGGTGAGATGTTCCTTGGGCTGGTCTGAGGACCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: GVSQRALSQSSRDPD*KLVRCSLGWSEDPR Trigger: CCTCGGGTCCTCAGACCAGCCCAAGGAACATCTCACCAATTTCAAATCGGGGTCCCTGGAGCTCTGGCTCAAAGCTCTCTGGCTGACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000642256.2 ENST00000644845.2 ENST00000645821.2 ENST00000646128.1 |
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| CDS CAA 72 bp | ACAGGCTTAGGAGGAATCCCGGGCTGCAGGCATTCCTaGGCCCAGTGGCCAGTTTTGCGGCACTTGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: TGLGGIPGCRHS*AQWPVLRHLKQ Trigger: TTGCTTCAAGTGCCGCAAAACTGGCCACTGGGCCAAGGAATGCCTGCAGCCCGGGATTCCTCCTAAGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS TCA 72 bp | GGTATTCCCATCAAGGATCCTCTCAGGGAACTGCCCTaGTGCCTTCTTGGAGGTCTGGCTCATGATGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GIPIKDPLRELP*CLLGGLAHDAG Trigger: GCCGGCATCATGAGCCAGACCTCCAAGAAGGCATCAGGGCAGTTCCCTGAGAGGATCCTTGATGGGAATACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642269.1 |
||
| CDS TCA 72 bp | ATAGTTCTGATTGCAGATCCCGAAGCTCGGCATCTGTaGTGGTCCAAGGGGCTTCTGAGGCGATCGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IVLIADPEARHL*WSKGLLRRSGS Trigger: GCTGCCCGATCGCCTCAGAAGCCCCTTGGACCATCACAGATGCCGAGCTTCGGGATCTGCAATCAGAACTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671188.1 |
||
| CDS CCA 72 bp | AGCTCCAGGGACCCTAGAAGGGGCTGTGATATTAGTTaGACAGTCCGATTTCCAGTGGGGTCCCGCACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSRDPRRGCDIS*TVRFPVGSRTG Trigger: ACCTGTGCGGGACCCCACTGGAAATCGGACTGTCCAACTAATATCACAGCCCCTTCTAGGGTCCCTGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645156.1 |
||
| CDS CAA 72 bp | GCTTTGAGCCAGAGCTCCAGGGACCCCGATTTGAAATaGGTGAGATGTTCCTTGGGCTGGTCTGAGGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: ALSQSSRDPDLK*VRCSLGWSEDP Trigger: CGGGTCCTCAGACCAGCCCAAGGAACATCTCACCAATTTCAAATCGGGGTCCCTGGAGCTCTGGCTCAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000642256.2 ENST00000644845.2 ENST00000645821.2 ENST00000646128.1 |
||
| CDS GCA 72 bp | ACTTCTTGGCTCCTGCAGGCCACCTGGACGGATATGTaGAGGTCACAGGGGTTACAATGGCTAAGCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSWLLQATWTDM*RSQGLQWLSFS Trigger: GCTGAAGCTTAGCCATTGTAACCCCTGTGACCTGCACATATCCGTCCAGGTGGCCTGCAGGAGCCAAGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000397381.6 ENST00000644174.2 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000645805.1 ENST00000647292.1 ENST00000655191.1 ENST00000655708.1 ENST00000665604.1 ENST00000666830.1 ENST00000671188.1 |
||
| CDS TCA 72 bp | CGCTGCCAGGAGCTTAAGGGTTGTAGGTTGTTTGTCTaGTCGGCTCTCGGCCTAATCTTGTGGCTTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RCQELKGCRLFV*SALGLILWLPG Trigger: TCCTGGAAGCCACAAGATTAGGCCGAGAGCCGATCAGACAAACAACCTACAACCCTTAAGCTCCTGGCAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 33 transcripts: ENST00000397381.6 ENST00000589333.3 ENST00000600160.3 ENST00000642256.2 ENST00000642269.1 ENST00000642894.1 ENST00000643552.1 ENST00000643818.1 ENST00000643846.1 ENST00000644103.1 ENST00000644174.2 ENST00000644400.1 ENST00000644502.1 ENST00000644567.2 ENST00000644730.1 ENST00000644845.2 ENST00000644962.1 ENST00000645156.1 ENST00000645177.1 ENST00000645221.1 ENST00000645251.1 ENST00000645389.2 ENST00000645708.2 ENST00000645805.1 ENST00000646128.1 ENST00000646397.1 ENST00000646494.1 ENST00000647185.1 ENST00000655191.1 ENST00000655708.1 ENST00000659568.1 ENST00000666830.1 ENST00000670862.1 |
||
| CDS TCA 72 bp | TGGCTGTCTGATGGGCATGGCTTTATTCTGGAATGGTaGACCCAATGGAGAGGGTCCTGCAGATGGACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WLSDGHGFILEW*TQWRGSCRWTA Trigger: TGCCGTCCATCTGCAGGACCCTCTCCATTGGGTTCACCATTCCAGAATAAAGCCATGCCCATCAGACAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 30 transcripts: ENST00000589333.3 ENST00000600160.3 ENST00000642256.2 ENST00000642269.1 ENST00000642894.1 ENST00000643552.1 ENST00000643818.1 ENST00000643846.1 ENST00000644103.1 ENST00000644174.2 ENST00000644400.1 ENST00000644502.1 ENST00000644567.2 ENST00000644730.1 ENST00000644845.2 ENST00000644962.1 ENST00000645156.1 ENST00000645177.1 ENST00000645221.1 ENST00000645251.1 ENST00000645389.2 ENST00000645708.2 ENST00000645805.1 ENST00000646397.1 ENST00000646494.1 ENST00000647185.1 ENST00000655708.1 ENST00000659568.1 ENST00000666830.1 ENST00000670862.1 |
||
| CDS CCA 72 bp | GGTTATCCTCAGCAGAGGAGGGGGTCACAAGGTGCATaGTGGAGAGATGATGGGACTCATTGTCCAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GYPQQRRGSQGA*WRDDGTHCPGE Trigger: TTCTCCTGGACAATGAGTCCCATCATCTCTCCACCATGCACCTTGTGACCCCCTCCTCTGCTGAGGATAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000397381.6 ENST00000642440.2 ENST00000644174.2 ENST00000644400.1 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000645805.1 ENST00000647292.1 ENST00000655191.1 ENST00000655708.1 ENST00000665604.1 ENST00000666830.1 ENST00000671188.1 |
||
| CDS CAA 72 bp | CAGAGAGCTTTGAGCCAGAGCTCCAGGGACCCCGATTaGAAATTGGTGAGATGTTCCTTGGGCTGGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QRALSQSSRDPD*KLVRCSLGWSE Trigger: CTCAGACCAGCCCAAGGAACATCTCACCAATTTCAAATCGGGGTCCCTGGAGCTCTGGCTCAAAGCTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000642256.2 ENST00000644845.2 ENST00000645821.2 ENST00000646128.1 |
||
| CDS TCA 72 bp | TGGCTGTCTGATGGGCATGGCTTTATTCTGGAATGGTaGACCCAATGGAGAGGGTCCCTCCACCGTAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: WLSDGHGFILEW*TQWRGSLHRKS Trigger: ACTCTTACGGTGGAGGGACCCTCTCCATTGGGTTCACCATTCCAGAATAAAGCCATGCCCATCAGACAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000397381.6 ENST00000646128.1 ENST00000655191.1 |
||
| CDS TCA 72 bp | GGACATATATGTGCAGGTCACAGGGGTTACAATGGCTaGGCTTCGGCTCAGAGGCCTGACAGTTCCCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GHICAGHRGYNG*ASAQRPDSSLL Trigger: CAAAAGGGAACTGTCAGGCCTCTGAGCCGAAGCTCAGCCATTGTAACCCCTGTGACCTGCACATATATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000644174.2 ENST00000644567.2 |
||
| CDS TCA 72 bp | GCAGAGGAGGGAGTCACAAGGTGCATGGTGGAGAGATaGTGGGACTCATTGTCCAGAAGAATGTCACAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AEEGVTRCMVER*WDSLSRRMSQG Trigger: ACCCTGTGACATTCTTCTGGACAATGAGTCCCATCATCTCTCCACCATGCACCTTGTGACTCCCTCCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000643567.1 ENST00000644174.2 ENST00000644567.2 ENST00000645764.1 ENST00000645805.1 ENST00000645877.1 ENST00000670862.1 |
||
| CDS TCA 72 bp | GGCATTCCTTGGCCCAGTGGCCAGTTTTGCGGCACTTaGAGCAAGGTCCATGAGATGGTTTTAAAGGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GIPWPSGQFCGT*SKVHEMVLKEC Trigger: GCACTCCTTTAAAACCATCTCATGGACCTTGCTTCAAGTGCCGCAAAACTGGCCACTGGGCCAAGGAATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645156.1 |
||
| CDS GCA 72 bp | ATGGCTGGGGTTTGTCTTACAGCAGAGGCAAGCAATTaGAGCTCTGAAAGACGTTGCTGCTTGGCTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MAGVCLTAEASN*SSERRCCLAAS Trigger: AGAGGCAGCCAAGCAGCAACGTCTTTCAGAGCTGCAATTGCTTGCCTCTGCTGTAAGACAAACCCCAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
||
| CDS CCA 72 bp | TATCCTCAGCAGAGGAGGGGGTCACAAGGTGCATGGTaGAGAGATGATGGGACTCATTGTCCAGGAGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: YPQQRRGSQGAW*RDDGTHCPGEE Trigger: TTCTTCTCCTGGACAATGAGTCCCATCATCTCTCCACCATGCACCTTGTGACCCCCTCCTCTGCTGAGGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000397381.6 ENST00000642440.2 ENST00000644174.2 ENST00000644400.1 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000645805.1 ENST00000647292.1 ENST00000655191.1 ENST00000655708.1 ENST00000665604.1 ENST00000666830.1 ENST00000671188.1 |
||
| CDS CAA 72 bp | TCACTTCTTTGTGGTTTTTCGGCTGCTCCAGACTTCTaGGCTCCTGCAGGCCACCCTTTTCCCATAGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLCGFSAAPDF*APAGHPFPIGV Trigger: CACACCTATGGGAAAAGGGTGGCCTGCAGGAGCCAAGAAGTCTGGAGCAGCCGAAAAACCACAAAGAAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000642440.2 ENST00000644400.1 |
||
| CDS CAA 72 bp | GTTTCACTTCCTTGTTTTTCAGCTGCTCCAGACTTCTaGGCTCCTGTAGGCCACCTCTCTGGTCAGCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: VSLPCFSAAPDF*APVGHLSGQPL Trigger: GAGTGGCTGACCAGAGAGGTGGCCTACAGGAGCCAAGAAGTCTGGAGCAGCTGAAAAACAAGGAAGTGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645805.1 |
||
| CDS CAA 90 bp | GAATTGGCTGTTTCACTTCCTTGTTTTTCAGCTGCTCCAGACTTCTaGGCTCCTGTAGGCCACCTCTCTGGTCAGCCACTCAGATGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ELAVSLPCFSAAPDF*APVGHLSGQPLRCC Trigger: GCAGCATCTGAGTGGCTGACCAGAGAGGTGGCCTACAGGAGCCAAGAAGTCTGGAGCAGCTGAAAAACAAGGAAGTGAAACAGCCAATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645805.1 |
||
| CDS TCA 72 bp | GGGACTCATTGTCCAGAAGAATGTCACAGGGTCGATTaGTCAGTTGGGGCAGGGCAGGAACACGTCATAATG | + |
|
Preference number: 6 (lower is better) Translates to: GTHCPEECHRVD*SVGAGQEHVIM Trigger: CATTATGACGTGTTCCTGCCCTGCCCCAACTGATCAATCGACCCTGTGACATTCTTCTGGACAATGAGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000644174.2 ENST00000644567.2 ENST00000645764.1 ENST00000645805.1 |
||
| CDS TCA 72 bp | AGGCTGTGGTTTGGTTGCTCTGAAGTTTTTGTGTGCTaGAGGCATGGCTGGGGTTTGTCTTACAGCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLWFGCSEVFVC*RHGWGLSYSRG Trigger: GCCTCTGCTGTAAGACAAACCCCAGCCATGCCTTCAGCACACAAAAACTTCAGAGCAACCAAACCACAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645156.1 |
||
| CDS GCA 72 bp | GCAGGAATTGGCTGTTTCACTTCCTTGTTTTTCAGCTaGTCCAGACTTCTTGGCTCCTGTAGGCCACCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGIGCFTSLFFS*SRLLGSCRPPG Trigger: TCCAGGTGGCCTACAGGAGCCAAGAAGTCTGGAGCAGCTGAAAAACAAGGAAGTGAAACAGCCAATTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000644174.2 ENST00000644567.2 |
||
| CDS GCA 72 bp | GCAGGAATTGGCTGTTTCACTTCCTTGTTTTTCAGCTaGTCCAGACTTCTTGGCTCCTGTAGGCCACCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AGIGCFTSLFFS*SRLLGSCRPPL Trigger: GAGAGGTGGCCTACAGGAGCCAAGAAGTCTGGAGCAGCTGAAAAACAAGGAAGTGAAACAGCCAATTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645805.1 |
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| CDS CCA 72 bp | TCTTGTGGCTTCCAGGAGGAAGAGGAGAGATCAAGCTaGCTGTCTGATGGGCATGGCTTTATTCTGGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: SCGFQEEEERSS*LSDGHGFILEW Trigger: CCATTCCAGAATAAAGCCATGCCCATCAGACAGCCAGCTTGATCTCTCCTCTTCCTCCTGGAAGCCACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 33 transcripts: ENST00000397381.6 ENST00000589333.3 ENST00000600160.3 ENST00000642256.2 ENST00000642269.1 ENST00000642894.1 ENST00000643552.1 ENST00000643818.1 ENST00000643846.1 ENST00000644103.1 ENST00000644174.2 ENST00000644400.1 ENST00000644502.1 ENST00000644567.2 ENST00000644730.1 ENST00000644845.2 ENST00000644962.1 ENST00000645156.1 ENST00000645177.1 ENST00000645221.1 ENST00000645251.1 ENST00000645389.2 ENST00000645708.2 ENST00000645805.1 ENST00000646128.1 ENST00000646397.1 ENST00000646494.1 ENST00000647185.1 ENST00000655191.1 ENST00000655708.1 ENST00000659568.1 ENST00000666830.1 ENST00000670862.1 |
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| CDS TCA 72 bp | TGGGACTCATTGTCCAGGAGAAGAATGTCACAGGGTTaGTTGATCAGTTGGGGCAGGGCAGGAACAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WDSLSRRRMSQG*LISWGRAGTSH Trigger: ATGACTTGTTCCTGCCCTGCCCCAACTGATCAATCAACCCTGTGACATTCTTCTCCTGGACAATGAGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000397381.6 ENST00000642440.2 ENST00000644174.2 ENST00000644400.1 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000645805.1 ENST00000647292.1 ENST00000655191.1 ENST00000655708.1 ENST00000665604.1 ENST00000666830.1 ENST00000671188.1 |
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| CDS CCA 72 bp | GTGAGCAACAAGGCTGTTAATTCACTTGGGTGCAAGTaGGCTGAGTCTGAAAAGAGAGTCAGCGAAGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VSNKAVNSLGCK*AESEKRVSEGR Trigger: TCTCCCTTCGCTGACTCTCTTTTCAGACTCAGCCCACTTGCACCCAAGTGAATTAACAGCCTTGTTGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000397381.6 ENST00000642256.2 ENST00000644174.2 ENST00000644567.2 ENST00000644796.2 ENST00000644962.1 ENST00000645764.1 ENST00000645805.1 ENST00000655191.1 ENST00000671188.1 |
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| CDS CCA 72 bp | GTGAGCAACAAGGCTGTTAATTCACTTGGGTGCAAGTaGGCTGAGTCCGAAAAGAGAGTCAGTGAAGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VSNKAVNSLGCK*AESEKRVSEGR Trigger: TCTCCCTTCACTGACTCTCTTTTCGGACTCAGCCCACTTGCACCCAAGTGAATTAACAGCCTTGTTGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000397381.6 ENST00000642440.2 ENST00000644174.2 ENST00000644400.1 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000645805.1 ENST00000647292.1 ENST00000655191.1 ENST00000665604.1 ENST00000666830.1 |
||
| CDS CCA 72 bp | AGGACTGATCGTCCAGCTAGGGTGTCTTCATATGGCTaGGAATCTGGAGTAGGCAAGAGAAGATTAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTDRPARVSSYG*ESGVGKRRLAA Trigger: AGCTGCTAATCTTCTCTTGCCTACTCCAGATTCCCAGCCATATGAAGACACCCTAGCTGGACGATCAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600160.3 ENST00000644590.1 |
||
| CDS CCA 72 bp | TGTTGTCAGCAGAGGAGGGAGTCACAAGGTGCATGGTaGAGAGATGATGGGACTCATTGTCCAGAAGAATGT | + |
|
Preference number: 6 (lower is better) Translates to: CCQQRRESQGAW*RDDGTHCPEEC Trigger: ACATTCTTCTGGACAATGAGTCCCATCATCTCTCCACCATGCACCTTGTGACTCCCTCCTCTGCTGACAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000643567.1 ENST00000644174.2 ENST00000644567.2 ENST00000645764.1 ENST00000645805.1 ENST00000645877.1 ENST00000646494.1 ENST00000670862.1 |
||
| CDS CCA 72 bp | ATCTGTTGTCAGCAGAGGAGGGAGTCACAAGGTGCATaGTGGAGAGATGATGGGACTCATTGTCCAGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ICCQQRRESQGA*WRDDGTHCPEE Trigger: TTCTTCTGGACAATGAGTCCCATCATCTCTCCACCATGCACCTTGTGACTCCCTCCTCTGCTGACAACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000643567.1 ENST00000644174.2 ENST00000644567.2 ENST00000644962.1 ENST00000645389.2 ENST00000645764.1 ENST00000645805.1 ENST00000645877.1 ENST00000646494.1 ENST00000670862.1 |
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| CDS CAA 72 bp | CTGGGAATCTGGAGTAGGCAAGAGAAGATTAGCAGCTaGGCAAATTTCCTGTCTAGCCTGCTAGAGGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGIWSRQEKISS*ANFLSSLLEDW Trigger: CCAGTCCTCTAGCAGGCTAGACAGGAAATTTGCCAAGCTGCTAATCTTCTCTTGCCTACTCCAGATTCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600160.3 ENST00000644590.1 |
||
| CDS CAA 72 bp | TGGGACTCATTGTCCAGAAGAATGTCACAGGGTCGATaGATCAGTTGGGGCAGGGCAGGAACACGTCATAAT | + |
|
Preference number: 6 (lower is better) Translates to: WDSLSRRMSQGR*ISWGRAGTRHN Trigger: ATTATGACGTGTTCCTGCCCTGCCCCAACTGATCAATCGACCCTGTGACATTCTTCTGGACAATGAGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000644174.2 ENST00000644567.2 ENST00000645764.1 ENST00000645805.1 |
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| CDS CAA 72 bp | GTGCCTAGAGGCTGTGGTTTGGTTGCTCTGAAGTTTTaGTGTGCTGAAGGCATGGCTGGGGTTTGTCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: VPRGCGLVALKF*CAEGMAGVCLT Trigger: TGTAAGACAAACCCCAGCCATGCCTTCAGCACACAAAAACTTCAGAGCAACCAAACCACAGCCTCTAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645156.1 |
||
| CDS CAA 72 bp | CCAGCTAGGGTGTCTTCATATGGCTGGGAATCCGATTaGAAATTGGTGAGATGTTCCTTGGGCTGGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PARVSSYGWESD*KLVRCSLGWSE Trigger: CTCAGACCAGCCCAAGGAACATCTCACCAATTTCAAATCGGATTCCCAGCCATATGAAGACACCCTAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642894.1 ENST00000643818.1 |
||
| CDS CAA 90 bp | TTTAAAGGAGTGCCTAGAGGCTGTGGTTTGGTTGCTCTGAAGTTTTaGTGTGCTGAAGGCATGGCTGGGGTTTGTCTTACAGCAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FKGVPRGCGLVALKF*CAEGMAGVCLTAEA Trigger: TGCCTCTGCTGTAAGACAAACCCCAGCCATGCCTTCAGCACACAAAAACTTCAGAGCAACCAAACCACAGCCTCTAGGCACTCCTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645156.1 |
||
| CDS TCA 72 bp | TCCATTGAGGCTGTAGAGTTTGAGGGGTCAGACTTTTaGCAAGGACTGATCGTCCAGCTAGGGTGTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SIEAVEFEGSDF*QGLIVQLGCLH Trigger: ATGAAGACACCCTAGCTGGACGATCAGTCCTTGTCAAAAGTCTGACCCCTCAAACTCTACAGCCTCAATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 29 transcripts: ENST00000589333.3 ENST00000600160.3 ENST00000642256.2 ENST00000642269.1 ENST00000642894.1 ENST00000643552.1 ENST00000643818.1 ENST00000644103.1 ENST00000644174.2 ENST00000644400.1 ENST00000644502.1 ENST00000644567.2 ENST00000644590.1 ENST00000644730.1 ENST00000644845.2 ENST00000644962.1 ENST00000645156.1 ENST00000645177.1 ENST00000645221.1 ENST00000645389.2 ENST00000645708.2 ENST00000645805.1 ENST00000646397.1 ENST00000646494.1 ENST00000647185.1 ENST00000655708.1 ENST00000659568.1 ENST00000666830.1 ENST00000670862.1 |
||
| CDS CCA 72 bp | TTAGTTAAGGCAGGAACTGGCTGTTTCACTTCTTTGTaGTTTTTCGGCTGCTCCAGACTTCTTGGCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LVKAGTGCFTSL*FFGCSRLLGSC Trigger: GCAGGAGCCAAGAAGTCTGGAGCAGCCGAAAAACCACAAAGAAGTGAAACAGCCAGTTCCTGCCTTAACTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000397381.6 ENST00000642440.2 ENST00000644174.2 ENST00000644400.1 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000645805.1 ENST00000647292.1 ENST00000655191.1 ENST00000655708.1 ENST00000665604.1 ENST00000666830.1 ENST00000671188.1 |
||
| CDS CCA 72 bp | TCTAAGGGTAGCCACCAAACGGGCCATGAACTGGGCTaGATTTTCATCTTTACCTTGGGTGGCTTCTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SKGSHQTGHELG*IFIFTLGGFLK Trigger: CTTTAAGAAGCCACCCAAGGTAAAGATGAAAATCCAGCCCAGTTCATGGCCCGTTTGGTGGCTACCCTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
||
| CDS CCA 72 bp | AAGTTTCTAAGGGTAGCCACCAAACGGGCCATGAACTaGGCTGGATTTTCATCTTTACCTTGGGTGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KFLRVATKRAMN*AGFSSLPWVAS Trigger: AGAAGCCACCCAAGGTAAAGATGAAAATCCAGCCCAGTTCATGGCCCGTTTGGTGGCTACCCTTAGAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
||
| CDS CAA 72 bp | AGGCTGTGGAAAGTTACAGTTAAAGGTGGTTATCTGTaGTCAGCAGAGGAGGGAGTCACAAGGTGCATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLWKVTVKGGYL*SAEEGVTRCMV Trigger: CACCATGCACCTTGTGACTCCCTCCTCTGCTGACAACAGATAACCACCTTTAACTGTAACTTTCCACAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000642256.2 ENST00000644174.2 ENST00000644567.2 ENST00000644962.1 ENST00000645764.1 ENST00000645805.1 ENST00000671188.1 |
||
| CDS CAA 72 bp | GAGGCAAGCAATTGCAGCTCTGAAAGACGTTGCTGCTaGGCTGCCTCTTCTCTATTGTTGAACACCTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EASNCSSERRCC*AASSLLLNTLK Trigger: CTTCAAGGTGTTCAACAATAGAGAAGAGGCAGCCAAGCAGCAACGTCTTTCAGAGCTGCAATTGCTTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645156.1 |
||
| CDS CAA 90 bp | TGCAGCTCTGAAAGACGTTGCTGCTTGGCTGCCTCTTCTCTATTGTaGAACACCTTGAAGGCGAGATTGATTAATTCCTGTTGTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: CSSERRCCLAASSLL*NTLKARLINSCCGV Trigger: AACCCCACAACAGGAATTAATCAATCTCGCCTTCAAGGTGTTCAACAATAGAGAAGAGGCAGCCAAGCAGCAACGTCTTTCAGAGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS TCA 72 bp | TGCCCAGGGGGCTGGTGTCTGGAACAAGATTGTGGCTaGGTAAGAAGGTGCATCCATATAAAATTGAAATGG | + |
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Preference number: 6 (lower is better) Translates to: CPGGWCLEQDCG*VRRCIHIKLKW Trigger: CCATTTCAATTTTATATGGATGCACCTTCTTACTCAGCCACAATCTTGTTCCAGACACCAGCCCCCTGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000600160.3 ENST00000644590.1 |
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| CDS GCA 72 bp | CTTTGTGTGAGCAACAAGGCTGTTAATTCACTTGGGTaGAAGTGGGCTGAGTCTGAAAAGAGAGTCAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: LCVSNKAVNSLG*KWAESEKRVSE Trigger: TTCGCTGACTCTCTTTTCAGACTCAGCCCACTTGCACCCAAGTGAATTAACAGCCTTGTTGCTCACACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000397381.6 ENST00000642256.2 ENST00000644174.2 ENST00000644567.2 ENST00000644796.2 ENST00000644962.1 ENST00000645764.1 ENST00000645805.1 ENST00000655191.1 ENST00000671188.1 |
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| CDS GCA 72 bp | CTTTGTGTGAGCAACAAGGCTGTTAATTCACTTGGGTaGAAGTGGGCTGAGTCCGAAAAGAGAGTCAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LCVSNKAVNSLG*KWAESEKRVSE Trigger: TTCACTGACTCTCTTTTCGGACTCAGCCCACTTGCACCCAAGTGAATTAACAGCCTTGTTGCTCACACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000397381.6 ENST00000642440.2 ENST00000644174.2 ENST00000644400.1 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000645805.1 ENST00000647292.1 ENST00000655191.1 ENST00000666830.1 |
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| CDS CAA 90 bp | TTCATATGGCTGGGAATCTGGAGTAGGCAAGAGAAGATTAGCAGCTaGGCAAATTTCCTGTCTAGCCTGCTAGAGGACTGGAAGATAGTT | + |
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Preference number: 6 (lower is better) Translates to: FIWLGIWSRQEKISS*ANFLSSLLEDWKIV Trigger: AACTATCTTCCAGTCCTCTAGCAGGCTAGACAGGAAATTTGCCAAGCTGCTAATCTTCTCTTGCCTACTCCAGATTCCCAGCCATATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600160.3 ENST00000644590.1 |
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| CDS CAA 90 bp | AATTGCAGCTCTGAAAGACGTTGCTGCTTGGCTGCCTCTTCTCTATaGTTGAACACCTTGAAGGCGAGATTGATTAATTCCTGTTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: NCSSERRCCLAASSL*LNTLKARLINSCCG Trigger: CCCACAACAGGAATTAATCAATCTCGCCTTCAAGGTGTTCAACAATAGAGAAGAGGCAGCCAAGCAGCAACGTCTTTCAGAGCTGCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS CAA 72 bp | TGCTGCTTGGCTGCCTCTTCTCTATTGTTGAACACCTaGAAGGCGAGATTGATTAATTCCTGTTGTGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: CCLAASSLLLNT*KARLINSCCGV Trigger: AACCCCACAACAGGAATTAATCAATCTCGCCTTCAAGGTGTTCAACAATAGAGAAGAGGCAGCCAAGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS CAA 90 bp | AGCCACCAAACGGGCCATGAACTGGGCTGGATTTTCATCTTTACCTaGGGTGGCTTCTTAAAGCTTGTCATAATTAACAGCTTTGTATGC | + |
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Preference number: 6 (lower is better) Translates to: SHQTGHELGWIFIFT*GGFLKLVIINSFVC Trigger: GCATACAAAGCTGTTAATTATGACAAGCTTTAAGAAGCCACCCAAGGTAAAGATGAAAATCCAGCCCAGTTCATGGCCCGTTTGGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS CAA 72 bp | ACGGGCCATGAACTGGGCTGGATTTTCATCTTTACCTaGGGTGGCTTCTTAAAGCTTGTCATAATTAACAGC | + |
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Preference number: 6 (lower is better) Translates to: TGHELGWIFIFT*GGFLKLVIINS Trigger: GCTGTTAATTATGACAAGCTTTAAGAAGCCACCCAAGGTAAAGATGAAAATCCAGCCCAGTTCATGGCCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS CAA 72 bp | TCTGAAAGACGTTGCTGCTTGGCTGCCTCTTCTCTATaGTTGAACACCTTGAAGGCGAGATTGATTAATTCC | + |
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Preference number: 6 (lower is better) Translates to: SERRCCLAASSL*LNTLKARLINS Trigger: GGAATTAATCAATCTCGCCTTCAAGGTGTTCAACAATAGAGAAGAGGCAGCCAAGCAGCAACGTCTTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645156.1 |
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| CDS GCA 72 bp | AACCACATGAAACGCCTCTGTTTACAAAAGCCTTTGTaGCGCTACTTTTATCTTAGACACCTCATCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: NHMKRLCLQKPL*RYFYLRHLIRL Trigger: CAGTCTGATGAGGTGTCTAAGATAAAAGTAGCGGCACAAAGGCTTTTGTAAACAGAGGCGTTTCATGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000397381.6 ENST00000642440.2 ENST00000644174.2 ENST00000644400.1 ENST00000644567.2 ENST00000644796.2 ENST00000645764.1 ENST00000666830.1 |
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