Pregenerated sensors for UBXN2A (Homo sapiens)
Ensembl gene IDs: ENSG00000173960Ensembl transcript IDs: ENST00000309033.5, ENST00000404924.5, ENST00000446425.2, ENST00000479859.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGTTGCTGTTTCATAGCAGGCATCTCGCACCCTATGAACATTACTaGTGCTATGGACCACTTAGTTCCTTGGCACACTCAATGCATGCT | + |
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Preference number: 1 (lower is better) Translates to: ELLFHSRHLAPYEHY*CYGPLSSLAHSMHA Trigger: AGCATGCATTGAGTGTGCCAAGGAACTAAGTGGTCCATAGCAGCAGTAATGTTCATAGGGTGCGAGATGCCTGCTATGAAACAGCAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR GCA 90 bp | TTGCTGTTTCATAGCAGGCATCTCGCACCCTATGAACATTACTGCTaGTATGGACCACTTAGTTCCTTGGCACACTCAATGCATGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LLFHSRHLAPYEHYC*YGPLSSLAHSMHAS Trigger: TGAAGCATGCATTGAGTGTGCCAAGGAACTAAGTGGTCCATAGCAGCAGTAATGTTCATAGGGTGCGAGATGCCTGCTATGAAACAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR CCA 90 bp | CTGGGTGACAAGGATAAACTTAGTGGTCTAGCAGATGTGTTTCAGTaGAGTCTCCCACCGTCCATGGTGAAAGCATGCAGGTTTTATTTT | + |
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Preference number: 1 (lower is better) Translates to: LGDKDKLSGLADVFQ*SLPPSMVKACRFYF Trigger: AAAATAAAACCTGCATGCTTTCACCATGGACGGTGGGAGACTCCACTGAAACACATCTGCTAGACCACTAAGTTTATCCTTGTCACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR CCA 90 bp | TCGCACCCTATGAACATTACTGCTGCTATGGACCACTTAGTTCCTTaGCACACTCAATGCATGCTTCATTTTAAATCTGATTCAATAGAT | + |
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Preference number: 1 (lower is better) Translates to: SHPMNITAAMDHLVP*HTQCMLHFKSDSID Trigger: ATCTATTGAATCAGATTTAAAATGAAGCATGCATTGAGTGTGCCAAGGAACTAAGTGGTCCATAGCAGCAGTAATGTTCATAGGGTGCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR GCA 90 bp | AACATTACTGCTGCTATGGACCACTTAGTTCCTTGGCACACTCAATaGATGCTTCATTTTAAATCTGATTCAATAGATCATTTGCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: NITAAMDHLVPWHTQ*MLHFKSDSIDHLQK Trigger: TTTTTGCAAATGATCTATTGAATCAGATTTAAAATGAAGCATGCATTGAGTGTGCCAAGGAACTAAGTGGTCCATAGCAGCAGTAATGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACAGCCTCCCGAGTAGCTaGGACTACAGTTGCGCACCG | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHSLPSS*DYSCAP Trigger: CGGTGCGCAACTGTAGTCCCAGCTACTCGGGAGGCT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACAGCCTCCCACGTAGCTaGGACTACAGGCGCATGCCA | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHSLPRS*DYRRMP Trigger: TGGCATGCGCCTGTAGTCCCAGCTACGTGGGAGGCT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGAGGTTGTGGTGAGCTaGGATTGCGCCACTGCACTC | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHEVVVS*DCATAL Trigger: GAGTGCAGTGGCGCAATCTCAGCTCACCACAACCTC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACAGGTGGAGGTTGTGGTaGGCTGAGATTGCGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHRWRLW*AEIAPL Trigger: CAGTGGCGCAATCTCAGCTCACCACAACCTCCACCT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACACTCCTGGGCTCAAGTaGTCCACCTGTCTTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHTPGLK*STCLGL Trigger: GAGGCCAAGACAGGTGGATCACTTGAGCCCAGGAGT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGGGGACAAGTTGCAGTaGGCCAAGATCGCGCCATTG | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHGDKLQ*AKIAPL Trigger: CAATGGCGCGATCTTGGCTCACTGCAACTTGTCCCC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACACTCCTGACCTCAGGTaGTCTGCCCGCTTTAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHTPDLR*SARFSV Trigger: GACACTAAAGCGGGCAGATCACCTGAGGTCAGGAGT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACATGGTCTCAATCACTTaGCCTTGTGATCCGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHMVSIT*PCDPPA Trigger: GGCAGGCGGATCACAAGGTCAAGTGATTGAGACCAT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACAGCCTCCCTAGTAGCTaGGATTACAGGCATGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHSLPSS*DYRHVP Trigger: TGGCACATGCCTGTAATCTCAGCTACTAGGGAGGCT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACTTCAAGAGATTCTCCTaGCTCAGCCTCCCGAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHFKRFS*LSLPSS Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATCTCTTGAA...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCCAAGATCGCGCCATTaGACTCTAGTCTGGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHPRSRH*TLVWGK Trigger: TTTCCCCCAGACTAGAGTGCAATGGCGCGATCTTGG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCTACTCGGGAGGCTGTaGCAGAAGAATCGCTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHLLGRL*QKNRLN Trigger: GTTCAAGCGATTCTTCTGCCACAGCCTCCCGAGTAG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACAGCTACTTGGGAGGCTaGGCAGGAGAATCTCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHSYLGG*AGESLE Trigger: TTCAAGAGATTCTCCTGCTCAGCCTCCCAAGTAGCT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGCATCTCGCACCCTATaGACATTACTGCTGCTATGG | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHASRTL*TLLLLW Trigger: CCATAGCAGCAGTAATGTTCATAGGGTGCGAGATGC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGCTCACTGCAACCTCTaGCTCCTGAGTTCAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHAHCNL*LLSSSN Trigger: ATTGCTTGAACTCAGGAGGCAGAGGTTGCAGTGAGC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGCTCTGTCGCCAAGCTaGAGTACAGTTGCTCAATCT | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHALSPS*STVAQS Trigger: AGATTGAGCAACTGTACTCCAGCTTGGCGACAGAGC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGGGTTTCACCATGTTTaGCAGGATGGTCTCAATCTG | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHGFHHV*QDGLNL Trigger: CAGATTGAGACCATCCTGGCAAACATGGTGAAACCC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACTCAATCTCAGCTCACTaGAACCTACACTTGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHSISAH*NLHLPG Trigger: ACCTGGCAAGTGTAGGTTGCAGTGAGCTGAGATTGA...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACAGAGTTTTGCCTTGTTaGCCAGGCTGGTCTCAAACT | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHRVLPC*PGWSQT Trigger: AGTTTGAGACCAGCCTGGGCAACAAGGCAAAACTCT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCCATGTTTGCCAGGATaGTCTCAATCTGTTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHPCLPG*SQSVDL Trigger: GAGGTCAACAGATTGAGACCATCCTGGCAAACATGG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACAAACAGAAAACCAGCTaGGCACGGTGGTTCACACTT | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHKQKTS*ARWFTL Trigger: AAGTGTGAACCACCGTGCCCAGCTGGTTTTCTGTTT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGGGGATTCACCATGTTaGACAGGATGGTCTCAATCA | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHGDSPC*TGWSQS Trigger: TGATTGAGACCATCCTGTCCAACATGGTGAATCCCC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGTGAGTGGTGGCAAATaGATGGCTAATCCCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHVSGGK*MANPKC Trigger: ACATTTGGGATTAGCCATTCATTTGCCACCACTCAC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCTGGTTTTAAACTCCTaGCTTCAAGTGATCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHLVLNS*LQVILP Trigger: TGGGAGGATCACTTGAAGCCAGGAGTTTAAAACCAG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCATTGCACTCTAGTCTaGGGGAAAGAGCAAAACTCT | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHHCTLV*GKEQNS Trigger: AGAGTTTTGCTCTTTCCCCCAGACTAGAGTGCAATG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACTTTCCAGAGTCTACATaGTATGTGACTGCACAACAG | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHFPEST*YVTAQQ Trigger: CTGTTGTGCAGTCACATATCATGTAGACTCTGGAAA...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCCCTATGAACATTACTaGTGCTATGGACCACTTAGT | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHPYEHY*CYGPLS Trigger: ACTAAGTGGTCCATAGCAGCAGTAATGTTCATAGGG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGTGGTGGCAAATGAATaGCTAATCCCAAATGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHVVANE*LIPNVS Trigger: GCTAACATTTGGGATTAGCCATTCATTTGCCACCAC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGCATTATATTCTAAGTaGGTGGTGGCAAATGAATGG | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHALYSK*VVANEW Trigger: CCATTCATTTGCCACCACTCACTTAGAATATAATGC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACTATGAACATTACTGCTaGTATGGACCACTTAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHYEHYC*YGPLSS Trigger: GGAACTAAGTGGTCCATAGCAGCAGTAATGTTCATA...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCTGACAGTGAAAAATTaGGGTCTAACTGGATTTAGT | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHLTVKN*GLTGFS Trigger: ACTAAATCCAGTTAGACCTCAATTTTTCACTGTCAG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACTTCTGGGTAGTCTTTTaGAGAAAGTGCACTGAATAT | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHFWVVF*RKCTEY Trigger: ATATTCAGTGCACTTTCTCCAAAAGACTACCCAGAA...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACTTTTTAGTACAGACATaGTTTCACCACATTGACCAG | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHFLVQT*FHHIDQ Trigger: CTGGTCAATGTGGTGAAACCATGTCTGTACTAAAAA...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGGCACACTCAATGCATaGTTCATTTTAAATCTGATT | + |
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Preference number: 2 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHGTLNA*FILNLI Trigger: AATCAGATTTAAAATGAAGCATGCATTGAGTGTGCC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGAGCAGGAGAATCTCTaGAACCCGGGAGGTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHEQENL*NPGGGG Trigger: ACCTCCACCTCCCGGGTTCAAGAGATTCTCCTGCTC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCATGGTTTCACCACATaGACCAGGCTGGTCTCGAAC | + |
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Preference number: 3 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHHGFTT*TRLVSN Trigger: GTTCGAGACCAGCCTGGTCAATGTGGTGAAACCATG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGGGGTTTCACCATGTTaGCCAGGATGGTCTCAATCT | + |
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Preference number: 3 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHGVSPC*PGWSQS Trigger: AGATTGAGACCATCCTGGCAAACATGGTGAAACCCC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGGACCACTTAGTTCCTaGGCACACTCAATGCATGCT | + |
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Preference number: 3 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHGPLSS*AHSMHA Trigger: AGCATGCATTGAGTGTGCCAAGGAACTAAGTGGTCC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACATCCCCAATTTTGGTTaGCATGTCCACTTACAACCA | + |
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Preference number: 3 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHIPNFG*HVHLQP Trigger: TGGTTGTAAGTGGACATGCAAACCAAAATTGGGGAT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACAGGGGTCTCACTCTGTaGATCATTCTGGTTTTAAAC | + |
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Preference number: 3 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHRGLTL*IILVLN Trigger: GTTTAAAACCAGAATGATCAACAGAGTGAGACCCCT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR GCA 72 bp | CATAGCAGGCATCTCGCACCCTATGAACATTACTGCTaGTATGGACCACTTAGTTCCTTGGCACACTCAATG | + |
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Preference number: 3 (lower is better) Translates to: HSRHLAPYEHYC*YGPLSSLAHSM Trigger: CATTGAGTGTGCCAAGGAACTAAGTGGTCCATAGCAGCAGTAATGTTCATAGGGTGCGAGATGCCTGCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR CCA 72 bp | AAGGATAAACTTAGTGGTCTAGCAGATGTGTTTCAGTaGAGTCTCCCACCGTCCATGGTGAAAGCATGCAGG | + |
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Preference number: 3 (lower is better) Translates to: KDKLSGLADVFQ*SLPPSMVKACR Trigger: CCTGCATGCTTTCACCATGGACGGTGGGAGACTCCACTGAAACACATCTGCTAGACCACTAAGTTTATCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR GCA 72 bp | TTTCATAGCAGGCATCTCGCACCCTATGAACATTACTaGTGCTATGGACCACTTAGTTCCTTGGCACACTCA | + |
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Preference number: 3 (lower is better) Translates to: FHSRHLAPYEHY*CYGPLSSLAHS Trigger: TGAGTGTGCCAAGGAACTAAGTGGTCCATAGCAGCAGTAATGTTCATAGGGTGCGAGATGCCTGCTATGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR TCA 72 bp | GTATACAGAGGTGTTTTCCAGAGTCTACATGATATGTaGCTGCACAACAGACTGAATGTAGAAGACATGAGA | + |
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Preference number: 3 (lower is better) Translates to: VYRGVFQSLHDM*LHNRLNVEDMR Trigger: TCTCATGTCTTCTACATTCAGTCTGTTGTGCAGTCACATATCATGTAGACTCTGGAAAACACCTCTGTATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR TCA 72 bp | TTCACCAGTATACAGAGGTGTTTTCCAGAGTCTACATaGTATGTGACTGCACAACAGACTGAATGTAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: FTSIQRCFPEST*YVTAQQTECRR Trigger: TCTTCTACATTCAGTCTGTTGTGCAGTCACATATCATGTAGACTCTGGAAAACACCTCTGTATACTGGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR CCA 72 bp | ATGAACATTACTGCTGCTATGGACCACTTAGTTCCTTaGCACACTCAATGCATGCTTCATTTTAAATCTGAT | + |
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Preference number: 3 (lower is better) Translates to: MNITAAMDHLVP*HTQCMLHFKSD Trigger: ATCAGATTTAAAATGAAGCATGCATTGAGTGTGCCAAGGAACTAAGTGGTCCATAGCAGCAGTAATGTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| 3UTR TCA 72 bp | CCAAATGATTCTGAAACTAAGGCTTCAGAATCATTGTaGACCATCACTTTATATAGATTGGTTCTCAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: PNDSETKASESL*TITLYRLVLKV Trigger: CACTTTGAGAACCAATCTATATAAAGTGATGGTTCACAATGATTCTGAAGCCTTAGTTTCAGAATCATTTGG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCCGCGGCCGCGCCGCTaGGATCCCGCCAGCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHPRPRR*DPASLS Trigger: AGAGAGGCTGGCGGGATCTCAGCGGCGCGGCCGCGG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCCTCCGGGGCTCAGGTaGTTCTCCTGCCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHPPGLR*FSCLSL Trigger: GAGGCTGAGGCAGGAGAATCACCTGAGCCCCGGAGG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGCTCACTGCAACCTCTaGCTCCGGGGCTCAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHAHCNL*LRGSGD Trigger: ATCACCTGAGCCCCGGAGGCAGAGGTTGCAGTGAGC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGGGGTTTCCCCATGTTaGCCAGGATGGTCTCGATCT | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHGVSPC*PGWSRS Trigger: AGATCGAGACCATCCTGGTCAACATGGGGAAACCCC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGACAGGAAGAGCTGTTaGCAGGGAAAACGGAGGACT | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHDRKSC*QGKRRT Trigger: AGTCCTCCGTTTTCCCTGGCAACAGCTCTTCCTGTC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGCAGATGTGTTTCAGTaGAGTCTCCCACCGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHADVFQ*SLPPSM Trigger: CATGGACGGTGGGAGACTCCACTGAAACACATCTGC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACTCTCATCTAGCAACCTaGGGACAGGAAGAGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHSHLAT*GQEELL Trigger: CAACAGCTCTTCCTGTCCTCAGGTTGCTAGATGAGA...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACTTGGTTCTCAAAGTGTaGCTGAGGGATCCCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHLVLKV*LRDPWR Trigger: TCTCCAGGGATCCCTCAGGCACACTTTGAGAACCAA...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR GCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACATTAAAAGAGCCTTCTaGCCCATGGAAGGCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHIKRAF*PMEGWE Trigger: CTCCCAGCCTTCCATGGGGCAGAAGGCTCTTTTAAT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACTCCCACCGTCCATGGTaGAAGCATGCAGGTTTTATT | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHSHRPW*KHAGFI Trigger: AATAAAACCTGCATGCTTTCACCATGGACGGTGGGA...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACATGAGTCACCGTGCCTaGCCTAGATATGTATTTCTA | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHMSHRA*PRYVFL Trigger: TAGAAATACATATCTAGGCCAGGCACGGTGACTCAT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCCCTGTTGTTATTCCTaGGTCCTTAGTAAAAACCTT | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHPCCYS*VLSKNL Trigger: AAGGTTTTTACTAAGGACTCAGGAATAACAACAGGG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR TCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCAAAAATCAGTGCTCTaGAAGTTCTCTAAAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHQKSVL*KFSKRC Trigger: GCATCTTTTAGAGAACTTTCAGAGCACTGATTTTTG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACTTTCCAAGAGCAAACTaGGTGACAAGGATAAACTTA | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHFPRAN*VTRINL Trigger: TAAGTTTATCCTTGTCACCCAGTTTGCTCTTGGAAA...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR CCA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACAGTTTATGTCATGATTaGTTCAGTGACAAAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHSLCHD*FSDKRE Trigger: TTCCCTTTTGTCACTGAACCAATCATGACATAAACT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR CAA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACCACCGCAGGCACCGTTaGGCCGCGGGCTCCGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHHRRHR*AAGSVW Trigger: CCAAACGGAGCCCGCGGCCAAACGGTGCCTGCGGTG...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS TCA 90 bp | GTAGAGATGAGGTCTGGCTATGTTCCCCGGCTGGCCTTGAACTCCTaGGCTCAGGCAATCCTCTCGCCACAGCCTGCCAAAGTTTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: VEMRSGYVPRLALNS*AQAILSPQPAKVLG Trigger: ACCCAAAACTTTGGCAGGCTGTGGCGAGAGGATTGCCTGAGCTCAGGAGTTCAAGGCCAGCCGGGGAACATAGCCAGACCTCATCTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479859.1 |
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| CDS-3UTR CAA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACGGACAGGAAGAGCTGTaGCCAGGGAAAACGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHGQEEL*PGKTED Trigger: GTCCTCCGTTTTCCCTGGCAACAGCTCTTCCTGTCC...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR CAA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACACAATCCTTTTTCCATaGGCCAACCAGATCTGTATA | + |
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Preference number: 5 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHTILFP*ANQICI Trigger: TATACAGATCTGGTTGGCCAATGGAAAAAGGATTGT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR CAA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACAAAAGATGCAGTTTTTaGGAGTCTCTGAATGATGAC | + |
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Preference number: 5 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHKRCSF*ESLNDD Trigger: GTCATCATTCAGAGACTCCAAAAAACTGCATCTTTT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS-3UTR CAA 90 bp | TCTCAAAGTGTGCCTGAGGGATCCCTGGAGATTCCCAAGACCCATTCAGGGCACATCACTTTATATAGATaGGTTCTCAAAGTGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: SQSVPEGSLEIPKTHSGHITLYR*VLKVCL Trigger: CAGGCACACTTTGAGAACCAATCTATATAAAGTGAT...GTGCCCTGAATGGGTCTTGGGAATCTCCAGGGATCCCTCAGGCACACTTTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS TCA 72 bp | CGCCCCAGACCGCCTCAGGTTCCGCGGCCGCGCCGCTaGGATCCCGCCAGCCTCTCTCGGTCTTCGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RPRPPQVPRPRR*DPASLSRSSPG Trigger: GCCTGGCGAAGACCGAGAGAGGCTGGCGGGATCTCAGCGGCGCGGCCGCGGAACCTGAGGCGGTCTGGGGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309033.5 |
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| CDS CCA 72 bp | CTGCTCCATCCAGGCCACGGGGGTGACGGTGGGGTCTaGGGCATTCAGGCCTGGCTGGGCATGAGGGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLHPGHGGDGGV*GIQAWLGMRAS Trigger: TGAAGCCCTCATGCCCAGCCAGGCCTGAATGCCCCAGACCCCACCGTCACCCCCGTGGCCTGGATGGAGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000404924.5 ENST00000446425.2 |
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| CDS CAA 90 bp | GGCATGAAAAGTGCGACTCAAGTTCAGTGTCTTGCCTCGGGTAGCTaGGGGATTCCCAGTCAGCTCCTCGCGCCTTCGTCGCCGCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GMKSATQVQCLASGS*GIPSQLLAPSSPLP Trigger: GGGGAGCGGCGACGAAGGCGCGAGGAGCTGACTGGGAATCCCCAAGCTACCCGAGGCAAGACACTGAACTTGAGTCGCACTTTTCATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000404924.5 ENST00000446425.2 |
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| CDS TCA 72 bp | AGGGCTTCAGGCCCAATTCCACGCCCGAACTCGTCCTaGTTAGTCTGGCTTTTCTGGTCGCCCCAGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RASGPIPRPNSS*LVWLFWSPQPC Trigger: GCAGGGCTGGGGCGACCAGAAAAGCCAGACTAATCAGGACGAGTTCGGGCGTGGAATTGGGCCTGAAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446425.2 |
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| CDS CCA 72 bp | GTGCGACTCAAGTTCAGTGTCTTGCCTCGGGTAGCTTaGGGATTCCCAGTCAGCTCCTCGCGCCTTCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: VRLKFSVLPRVA*GFPVSSSRLRR Trigger: GCGACGAAGGCGCGAGGAGCTGACTGGGAATCCCCAAGCTACCCGAGGCAAGACACTGAACTTGAGTCGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000404924.5 ENST00000446425.2 |
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| CDS CAA 72 bp | AGTGCGACTCAAGTTCAGTGTCTTGCCTCGGGTAGCTaGGGGATTCCCAGTCAGCTCCTCGCGCCTTCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SATQVQCLASGS*GIPSQLLAPSS Trigger: CGACGAAGGCGCGAGGAGCTGACTGGGAATCCCCAAGCTACCCGAGGCAAGACACTGAACTTGAGTCGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000404924.5 ENST00000446425.2 |
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| CDS GCA 72 bp | GAACTCCTGAGCTCAGGCAATCCTCTCGCCACAGCCTaGCAAAGTTTTGGGTTTACAGGCTTGACCTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: ELLSSGNPLATA*QSFGFTGLTYH Trigger: GTGGTAGGTCAAGCCTGTAAACCCAAAACTTTGGCAGGCTGTGGCGAGAGGATTGCCTGAGCTCAGGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479859.1 |
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| CDS TCA 72 bp | TTTTTATCACAGCTGTCATTCTCATTTCTACAGGCATaGAAAGTGCGACTCAAGTTCAGTGTCTTGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: FLSQLSFSFLQA*KVRLKFSVLPR Trigger: CCGAGGCAAGACACTGAACTTGAGTCGCACTTTTCATGCCTGTAGAAATGAGAATGACAGCTGTGATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000404924.5 ENST00000446425.2 |
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