RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBXN10 (Homo sapiens)

Ensembl gene IDs: ENSG00000162543

Ensembl transcript IDs: ENST00000375099.4

Found 474 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGCTCGGCATAGGCACAGACTTCACTGCTTCAGAGGACACGCAGTaGAGACGAGAGTCCCAAGCTTCCCAGCTGCACCAGGTCCACATG +
Preference number: 1 (lower is better)
Translates to: ALGIGTDFTASEDTQ*RRESQASQLHQVHM
Trigger: CATGTGGACCTGGTGCAGCTGGGAAGCTTGGGACTCTCGTCTGCACTGCGTGTCCTCTGAAGCAGTGAAGTCTGTGCCTATGCCGAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 90 bp TGCTGGGCTCAAATTCTGTCTGCTGTGGTCATTAACGGGAAGAGGTaGCCAGTTGTGTGGGCCTGCCTGAGGCACCACTGGCCCCAGCTG +
Preference number: 1 (lower is better)
Translates to: CWAQILSAVVINGKR*PVVWACLRHHWPQL
Trigger: CAGCTGGGGCCAGTGGTGCCTCAGGCAGGCCCACACAACTGGCCACCTCTTCCCGTTAATGACCACAGCAGACAGAATTTGAGCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 90 bp GCCCCTCAACACGGCAGCCAGAGGGCGCCTCTGAGCAGGACAGTCTaGATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACA +
Preference number: 1 (lower is better)
Translates to: APQHGSQRAPLSRTV*MRLAQFYPWAFVTT
Trigger: TGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTGCTCAGAGGCGCCCTCTGGCTGCCGTGTTGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 90 bp AACGGGAAGAGGTGGCCAGTTGTGTGGGCCTGCCTGAGGCACCACTaGCCCCAGCTGACCTTTCCAATCAAAGGAATGGCTGACCAAACC +
Preference number: 1 (lower is better)
Translates to: NGKRWPVVWACLRHH*PQLTFPIKGMADQT
Trigger: GGTTTGGTCAGCCATTCCTTTGATTGGAAAGGTCAGCTGGGGCCAGTGGTGCCTCAGGCAGGCCCACACAACTGGCCACCTCTTCCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp TCTGCTGTGGTCATTAACGGGAAGAGGTGGCCAGTTGTGTGGGCCTaGCTGAGGCACCACTGGCCCCAGCTGACCTTTCCAATCAAAGGA +
Preference number: 1 (lower is better)
Translates to: SAVVINGKRWPVVWA*LRHHWPQLTFPIKG
Trigger: TCCTTTGATTGGAAAGGTCAGCTGGGGCCAGTGGTGCCTCAGGCAGGCCCACACAACTGGCCACCTCTTCCCGTTAATGACCACAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp CGGCAGCCAGAGGGCGCCTCTGAGCAGGACAGTCTGAATGAGGCTTaGTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTTCAGTC +
Preference number: 1 (lower is better)
Translates to: RQPEGASEQDSLNEA*SVLPVGICHHSRSV
Trigger: GACTGAACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTGCTCAGAGGCGCCCTCTGGCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 90 bp ATTCTGTCTGCTGTGGTCATTAACGGGAAGAGGTGGCCAGTTGTGTaGGCCTGCCTGAGGCACCACTGGCCCCAGCTGACCTTTCCAATC +
Preference number: 1 (lower is better)
Translates to: ILSAVVINGKRWPVV*ACLRHHWPQLTFPI
Trigger: GATTGGAAAGGTCAGCTGGGGCCAGTGGTGCCTCAGGCAGGCCCACACAACTGGCCACCTCTTCCCGTTAATGACCACAGCAGACAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp CAAGCTTCCCAGCTGCACCAGGTCCACATGGCACTTGAAACAGGCTaGCTAAGAGGCCACAACGCCCAAGCATGCTCCTTTGCTCAGAGA +
Preference number: 1 (lower is better)
Translates to: QASQLHQVHMALETG*LRGHNAQACSFAQR
Trigger: TCTCTGAGCAAAGGAGCATGCTTGGGCGTTGTGGCCTCTTAGGCAGCCTGTTTCAAGTGCCATGTGGACCTGGTGCAGCTGGGAAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp GGTCCACAGTCATGTTCACAAGCCATCTCTTCCGCAGGAGTGCCCTaGCTTGAAGGCTGTTGGCTGGGTCCCCAGATATTCTCAGGGCAA +
Preference number: 1 (lower is better)
Translates to: GPQSCSQAISSAGVP*LEGCWLGPQIFSGQ
Trigger: TTGCCCTGAGAATATCTGGGGACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTGAACATGACTGTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp CTCTGGGTCCACAGTCATGTTCACAAGCCATCTCTTCCGCAGGAGTaGCCTGCCTTGAAGGCTGTTGGCTGGGTCCCCAGATATTCTCAG +
Preference number: 1 (lower is better)
Translates to: LWVHSHVHKPSLPQE*PALKAVGWVPRYSQ
Trigger: CTGAGAATATCTGGGGACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTGAACATGACTGTGGACCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 90 bp ACAGTCATGTTCACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTaGAGGCTGTTGGCTGGGTCCCCAGATATTCTCAGGGCAAGATCT +
Preference number: 1 (lower is better)
Translates to: TVMFTSHLFRRSALP*RLLAGSPDILRARS
Trigger: AGATCTTGCCCTGAGAATATCTGGGGACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTGAACATGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 90 bp ACACAAGACCCCATGGTCTTCAAAGCAGCTCAGGCTAAGACAGGCTaGTGTACTTCATGCCGGTCAACCAGATGCTCGGGCACATGGTCT +
Preference number: 1 (lower is better)
Translates to: TQDPMVFKAAQAKTG*CTSCRSTRCSGTWS
Trigger: AGACCATGTGCCCGAGCATCTGGTTGACCGGCATGAAGTACATCAGCCTGTCTTAGCCTGAGCTGCTTTGAAGACCATGGGGTCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 90 bp TCACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTaGCTGGGTCCCCAGATATTCTCAGGGCAAGATCTGTTGTGTTAT +
Preference number: 1 (lower is better)
Translates to: SQAISSAGVPCLEGC*LGPQIFSGQDLLCY
Trigger: ATAACACAACAGATCTTGCCCTGAGAATATCTGGGGACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 90 bp ACTCCCAACCATGCAGCTTATCTGAGCACAGGATGCGCTTGTTGCTaGGGTAGCCACATGTATATGCTTCTGGAACTCCTGATTCCTGCC +
Preference number: 1 (lower is better)
Translates to: TPNHAAYLSTGCACC*GSHMYMLLELLIPA
Trigger: GGCAGGAATCAGGAGTTCCAGAAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGCTGCATGGTTGGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 90 bp CTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTAAATaGATAACTGAGGTCTATGACCCCAAACTGGGCAAGGCTGACCCA +
Preference number: 1 (lower is better)
Translates to: LKVWHWVSPQWPSVK*ITEVYDPKLGKADP
Trigger: TGGGTCAGCCTTGCCCAGTTTGGGGTCATAGACCTCAGTTATTCATTTAACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTaGTGGACTGGAATAAATGGAGGGAAGGGTGGCAAGAAAGGGAGG +
Preference number: 1 (lower is better)
Translates to: MALFAFPRRNASPVS*WTGINGGKGGKKGR
Trigger: CCTCCCTTTCTTGCCACCCTTCCCTCCATTTATTCCAGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 90 bp TCACTAGAAAAGGTGGGCAAGAGCTTCCTTAGCATCTCCAGAGGGTaGGATGAAGAGCCAGCAGTAACAATGTGGGATCCTCACTTTGGG +
Preference number: 1 (lower is better)
Translates to: SLEKVGKSFLSISRG*DEEPAVTMWDPHFG
Trigger: CCCAAAGTGAGGATCCCACATTGTTACTGCTGGCTCTTCATCCCACCCTCTGGAGATGCTAAGGAAGCTCTTGCCCACCTTTTCTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 90 bp TTGCTAACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTaGGGTTTGGTTGGTTCTGGTTTCTGGATGAGAGTCAATAGGCTC +
Preference number: 1 (lower is better)
Translates to: LLTPPKRPQAFPVIW*GLVGSGFWMRVNRL
Trigger: GAGCCTATTGACTCTCATCCAGAAACCAGAACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGTTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 90 bp GCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTaGACTGGAATAAATGGAGGGAAGGGTGGCAAGAAAGGGAGGGAT +
Preference number: 1 (lower is better)
Translates to: ALFAFPRRNASPVSC*TGINGGKGGKKGRD
Trigger: ATCCCTCCCTTTCTTGCCACCCTTCCCTCCATTTATTCCAGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 90 bp GAAGATCAGGCTAACACACCCCTCTGTCCAGTCGTGTGTGGGAGCTaGAGCCTTAGGTTAAAATACGAGATGCACTTCTCCACTGACTCA +
Preference number: 1 (lower is better)
Translates to: EDQANTPLCPVVCGS*SLRLKYEMHFSTDS
Trigger: TGAGTCAGTGGAGAAGTGCATCTCGTATTTTAACCTAAGGCTTCAGCTCCCACACACGACTGGACAGAGGGGTGTGTTAGCCTGATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp GGAGAAGTCATGATCACTGCTGTTTCAGGAACAACCTTGGTAACTTaGCAGTTACGCTGGTGGTGGAGAGAATGGAACAGCTGGAAGGGA +
Preference number: 1 (lower is better)
Translates to: GEVMITAVSGTTLVT*QLRWWWREWNSWKG
Trigger: TCCCTTCCAGCTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCTGAAACAGCAGTGATCATGACTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp AACACTCCCAACCATGCAGCTTATCTGAGCACAGGATGCGCTTGTTaGTGGGGTAGCCACATGTATATGCTTCTGGAACTCCTGATTCCT +
Preference number: 1 (lower is better)
Translates to: NTPNHAAYLSTGCAC*WGSHMYMLLELLIP
Trigger: AGGAATCAGGAGTTCCAGAAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGCTGCATGGTTGGGAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp GTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGGACACCCATaGTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATC +
Preference number: 1 (lower is better)
Translates to: VGSCFLANTFFSGHP*LSQSVALGKPSMAI
Trigger: GATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp ATTAAGCCCCAGAATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATaGATCCCCAGTCAGCTGCTGGACTGGAATAAATGGAGGGAAGGG +
Preference number: 1 (lower is better)
Translates to: IKPQNDGFVCLPKKK*IPSQLLDWNKWREG
Trigger: CCCTTCCCTCCATTTATTCCAGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATTCTGGGGCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 90 bp AAGGCTGCTCTTAGTTTCTCTGTGAAGCATTTTATATGGGAGCTCTaGGGTGACTCTGGGTCCACAGTCATGTTCACAAGCCATCTCTTC +
Preference number: 1 (lower is better)
Translates to: KAALSFSVKHFIWEL*GDSGSTVMFTSHLF
Trigger: GAAGAGATGGCTTGTGAACATGACTGTGGACCCAGAGTCACCCCAGAGCTCCCATATAAAATGCTTCACAGAGAAACTAAGAGCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 90 bp GGAACAACATGCACAGAATGTCTGAGTGTTCCCTACTCTGAAGGATaGTTTGGCCATAAAAGGGATCAGATGAGTCATGGAGTCTGGCTG +
Preference number: 1 (lower is better)
Translates to: GTTCTECLSVPYSEG*FGHKRDQMSHGVWL
Trigger: CAGCCAGACTCCATGACTCATCTGATCCCTTTTATGGCCAAATCATCCTTCAGAGTAGGGAACACTCAGACATTCTGTGCATGTTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 90 bp CTTTGTGATGACCATGCTTTGGGGGAACAACATGCACAGAATGTCTaGGTGTTCCCTACTCTGAAGGATGATTTGGCCATAAAAGGGATC +
Preference number: 1 (lower is better)
Translates to: LCDDHALGEQHAQNV*VFPTLKDDLAIKGI
Trigger: GATCCCTTTTATGGCCAAATCATCCTTCAGAGTAGGGAACACTCAGACATTCTGTGCATGTTGTTCCCCCAAAGCATGGTCATCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp AAACTAGGAGCTTTATTAATTAAGCCCCAGAATGATGGCTTTGTTTaGCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTGG +
Preference number: 1 (lower is better)
Translates to: KLGALLIKPQNDGFV*LPKKKCIPSQLLDW
Trigger: CCAGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATTCTGGGGCTTAATTAATAAAGCTCCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 90 bp GAGGCACCACTGGCCCCAGCTGACCTTTCCAATCAAAGGAATGGCTaGCCAAACCAGGATGGTATTAAGAAATTCTATAAAACATTCAGA +
Preference number: 1 (lower is better)
Translates to: EAPLAPADLSNQRNG*PNQDGIKKFYKTFR
Trigger: TCTGAATGTTTTATAGAATTTCTTAATACCATCCTGGTTTGGTCAGCCATTCCTTTGATTGGAAAGGTCAGCTGGGGCCAGTGGTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp GGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACAAATaGCAGTTAGATAGTTCCTACACTGTGGTTATTTACCAGACTAGA +
Preference number: 1 (lower is better)
Translates to: GVNGLFLQNTRKKHK*QLDSSYTVVIYQTR
Trigger: TCTAGTCTGGTAAATAACCACAGTGTAGGAACTATCTAACTGGCATTTGTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 90 bp CAGGTGGATCTGGCTCTAGTCTTTAAGGTTATTAATTGGAATGAATaGCCCAAGGCTGCTCTTAGTTTCTCTGTGAAGCATTTTATATGG +
Preference number: 1 (lower is better)
Translates to: QVDLALVFKVINWNE*PKAALSFSVKHFIW
Trigger: CCATATAAAATGCTTCACAGAGAAACTAAGAGCAGCCTTGGGGCATTCATTCCAATTAATAACCTTAAAGACTAGAGCCAGATCCACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 90 bp TTTGTAATGCAGGTGGATCTGGCTCTAGTCTTTAAGGTTATTAATTaGAATGAATGCCCCAAGGCTGCTCTTAGTTTCTCTGTGAAGCAT +
Preference number: 1 (lower is better)
Translates to: FVMQVDLALVFKVIN*NECPKAALSFSVKH
Trigger: ATGCTTCACAGAGAAACTAAGAGCAGCCTTGGGGCATTCATTCCAATTAATAACCTTAAAGACTAGAGCCAGATCCACCTGCATTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 90 bp CCCAGAAGTTGTAAACCTAGTCAGTCTCTATTAAAAAGTAGCTACTaGGTAATCCATGCTCATGGAAGCAACTTACTTTCAAGCTTTAGG +
Preference number: 1 (lower is better)
Translates to: PRSCKPSQSLLKSSY*VIHAHGSNLLSSFR
Trigger: CCTAAAGCTTGAAAGTAAGTTGCTTCCATGAGCATGGATTACCCAGTAGCTACTTTTTAATAGAGACTGACTAGGTTTACAACTTCTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 90 bp AAGGCTGACCCACCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTaGAGCCCATTTAGGACAGGGGGCCTCAGCTGCAATGCAACATGT +
Preference number: 2 (lower is better)
Translates to: KADPPKATKRSVLGR*SPFRTGGLSCNATC
Trigger: ACATGTTGCATTGCAGCTGAGGCCCCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGGTGGGTCAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGAGACCAGCCTTCTTCTaGGCAAATGGCAGTGGTGCC +
Preference number: 2 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGRPAFF*ANGSGA
Trigger: GGCACCACTGCCATTTGCTCAGAAGAAGGCTGGTCT...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATTGTGTGGGCCTGCCTaGGGCACCACTGGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQLCGPA*GTTGPS
Trigger: GCTGGGGCCAGTGGTGCCTCAGGCAGGCCCACACAA...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCAGGCACAGACTTCACTaGTTCAGAGGACACGCAGTG +
Preference number: 2 (lower is better)
Translates to: HKPSLPQECPALKAVGWVRHRLH*FRGHAV
Trigger: CACTGCGTGTCCTCTGAAGCAGTGAAGTCTGTGCCT...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCTATCTGAGCACAGGATaGGCTTGTTGCTGGGGTAGC +
Preference number: 2 (lower is better)
Translates to: HKPSLPQECPALKAVGWVYLSTG*ACCWGS
Trigger: GCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATA...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGCTGAGCAAATGGCAGTaGTGCCCATCTCCACTAAGC +
Preference number: 2 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGLSKWQ*CPSPLS
Trigger: GCTTAGTGGAGATGGGCACCACTGCCATTTGCTCAG...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 90 bp CACAGTCATGTTCACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTaGAAGGCTGTTGGCTGGGTCCCCAGATATTCTCAGGGCAAGATC +
Preference number: 2 (lower is better)
Translates to: HSHVHKPSLPQECPA*KAVGWVPRYSQGKI
Trigger: GATCTTGCCCTGAGAATATCTGGGGACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTGAACATGACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTGGTCCACATGGCACTTaGAACAGGCTGCCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGGPHGT*NRLPKR
Trigger: CCTCTTAGGCAGCCTGTTTCAAGTGCCATGTGGACC...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACCCGTCGCTTCTGCAGTaGGCATCAGAAGTGTCCGGG +
Preference number: 2 (lower is better)
Translates to: QDSLNEACSVLPVGICHHPSLLQ*ASEVSG
Trigger: CCCGGACACTTCTGATGCCCACTGCAGAAGCGACGG...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTACCACTGGCCCCAGCTaGCCTTTCCAATCAAAGGAA +
Preference number: 2 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGTTGPS*PFQSKE
Trigger: TTCCTTTGATTGGAAAGGTCAGCTGGGGCCAGTGGT...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGTGCTGTGACAGAAGCTaGGAGCAGGAGCCCCGTCGC +
Preference number: 2 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLCCDRS*EQEPRR
Trigger: GCGACGGGGCTCCTGCTCTCAGCTTCTGTCACAGCA...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTCTCCAGAGGGTGGGATaGAGAGCCAGCAGTAACAAT +
Preference number: 2 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGLQRVG*RASSNN
Trigger: ATTGTTACTGCTGGCTCTTCATCCCACCCTCTGGAG...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTCCCAAGCTTCCCAGCTaGACCAGGTCCACATGGCAC +
Preference number: 2 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACPKLPS*TRSTWH
Trigger: GTGCCATGTGGACCTGGTGCAGCTGGGAAGCTTGGG...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCTGCCGGTCAACCAGATaGTCGGGCACATGGTCTCTC +
Preference number: 2 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGCRSTR*SGTWSL
Trigger: GAGAGACCATGTGCCCGAGCATCTGGTTGACCGGCA...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCTTTTCAGGACACCCATaGTTGTCTCAAAGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: HKPSLPQECPALKAVGWVFSGHP*LSQSVA
Trigger: TGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAA...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGGTGATGACCATGCTTTaGGGGAACAACATGCACAGA +
Preference number: 2 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGVMTML*GNNMHR
Trigger: TCTGTGCATGTTGTTCCCCCAAAGCATGGTCATCAC...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAACAAACTGGGCAAGGCTaGCCCACCCAAAGCCACCAA +
Preference number: 2 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQQTGQG*PTQSHQ
Trigger: TTGGTGGCTTTGGGTGGGTCAGCCTTGCCCAGTTTG...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCGCACTTGAAACAGGCTaGCTAAGAGGCCACAACGCC +
Preference number: 2 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGALETG*LRGHNA
Trigger: GGCGTTGTGGCCTCTTAGGCAGCCTGTTTCAAGTGC...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp TCACTAGAAAAGGTGGGCAAGAGCTTCCTTAGCATCTCCAGAGGGTGGGATGAAACAGGGGGCCTCAGCTaGAATGCAACATGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: SLEKVGKSFLSISRGWDETGGLS*NATCGA
Trigger: GGCTCCACATGTTGCATTGCAGCTGAGGCCCCCTGT...TTCATCCCACCCTCTGGAGATGCTAAGGAAGCTCTTGCCCACCTTTTCTAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTGTAGGTGTGATTTTATaGGAGGCTCTTCCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: THACLKVWHWVSPQWPSVVGVIL*EALPPA
Trigger: GGCTGGGGGAAGAGCCTCCCATAAAATCACACCTAC...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCTCTATGACCCCAAACTaGGCAAGGCTGACCCACCCA +
Preference number: 2 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFSMTPN*ARLTHP
Trigger: TGGGTGGGTCAGCCTTGCCCAGTTTGGGGTCATAGA...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTaGGTTGGTTCTGGTTTCTGGATGAGAGTCAATAGGCTCGTGAAC +
Preference number: 2 (lower is better)
Translates to: TPPKRPQAFPVIWWG*VGSGFWMRVNRLVN
Trigger: GTTCACGAGCCTATTGACTCTCATCCAGAAACCAGAACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTAGGACACACCATGTTTaGAGTGGGCAACGCACTGAA +
Preference number: 2 (lower is better)
Translates to: THACLKVWHWVSPQWPSVRTHHV*SGQRTE
Trigger: TTCAGTGCGTTGCCCACTTCAAACATGGTGTGTCCT...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTTGCTTCTGGAACTCCTaGTTCCTGCCTTCTCTCTGT +
Preference number: 2 (lower is better)
Translates to: THACLKVWHWVSPQWPSVCFWNS*FLPSLC
Trigger: ACAGAGAGAAGGCAGGAATCAGGAGTTCCAGAAGCA...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGCAAATGGCAGTGGTaGCCATCTCCACTAAGCCTC +
Preference number: 2 (lower is better)
Translates to: QDSLNEACSVLPVGICHHSKWQW*PSPLSL
Trigger: GAGGCTTAGTGGAGATGGGCACCACTGCCATTTGCT...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTGCCTGCCATGTGCTTTaGTGCCGTGGTGGTTGTTTG +
Preference number: 2 (lower is better)
Translates to: MALFAFPRRNASPVSCWTACHVL*CRGGCL
Trigger: CAAACAACCACCACGGCAGCAAAGCACATGGCAGGC...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTGTGGGATCCTCACTTTaGGGTCCTTTGCAGATAAAG +
Preference number: 2 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGVGSSL*GPLQIK
Trigger: CTTTATCTGCAAAGGACCCCAAAGTGAGGATCCCAC...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTGGAAAGGAGAAGTCATaGTCACTGCTGTTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGGKEKS*SLLFQE
Trigger: TTCCTGAAACAGCAGTGATCATGACTTCTCCTTTCC...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTCAGGCTAAGACAGGCTaGTGTACTTCATGCCGGTCA +
Preference number: 2 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLQAKTG*CTSCRS
Trigger: TGACCGGCATGAAGTACATCAGCCTGTCTTAGCCTG...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGTCAGAGGACACGCAGTaGAGACGAGAGTCCCAAGCT +
Preference number: 2 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLSEDTQ*RRESQA
Trigger: AGCTTGGGACTCTCGTCTGCACTGCGTGTCCTCTGA...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCGGATGCGCTTGTTGCTaGGGTAGCCACATGTATATG +
Preference number: 2 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFGCACC*GSHMYM
Trigger: CATATACATGTGGCTACCCCAGCAACAAGCGCATCC...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCGCTTGTCTCAAAGTGTaGCACTGGGTAAGCCCTCAA +
Preference number: 2 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGACLKV*HWVSPQ
Trigger: TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGC...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCCCAGCAGTAACAATGTaGGATCCTCACTTTGGGGTC +
Preference number: 2 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGPAVTM*DPHFGV
Trigger: GACCCCAAAGTGAGGATCCCACATTGTTACTGCTGG...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTAGCATCTCCAGAGGGTaGGATGAAGAGCCAGCAGTA +
Preference number: 2 (lower is better)
Translates to: MALFAFPRRNASPVSCWTSISRG*DEEPAV
Trigger: TACTGCTGGCTCTTCATCCCACCCTCTGGAGATGCT...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 90 bp AGGAGAAGTCATGATCACTGCTGTTTCAGGAACAACCTTGGTAACTaGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGCTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: RRSHDHCCFRNNLGN*PVTLVVERMEQLEG
Trigger: CCCTTCCAGCTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCTGAAACAGCAGTGATCATGACTTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTACAACCTTGGTAACTTaGCAGTTACGCTGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLTTLVT*QLRWWW
Trigger: CCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGT...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCGGAACTCCTGATTCCTaGCTTCTCTCTGTATACCCA +
Preference number: 2 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFGTPDS*LLSVYP
Trigger: TGGGTATACAGAGAGAAGGCAGGAATCAGGAGTTCC...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp AAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCATGCACCAGGTCCACATaGCACTTGAAACAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: KGLLPKMGSTACFFKILACTRST*HLKQAA
Trigger: GGCAGCCTGTTTCAAGTGCCATGTGGACCTGGTGCA...TGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAGGCTACTTCCAAAGATaGGGTCAACGGCCTGTTTCT +
Preference number: 2 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQGYFQR*GQRPVS
Trigger: AGAAACAGGCCGTTGACCCCATCTTTGGAAGTAGCC...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTATGATCTGGGCAGTGTaGGATGCAGTTAGGACCAGA +
Preference number: 2 (lower is better)
Translates to: SLNEACSVLPVGICHHSRMIWAV*DAVRTR
Trigger: TCTGGTCCTAACTGCATCCCACACTGCCCAGATCAT...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTTTCCAATCAAAGGAATaGCTGACCAAACCAGGATGG +
Preference number: 2 (lower is better)
Translates to: THACLKVWHWVSPQWPSVFQSKE*LTKPGW
Trigger: CCATCCTGGTTTGGTCAGCCATTCCTTTGATTGGAA...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGTGCCTGAGGCACCACTaGCCCCAGCTGACCTTTCCA +
Preference number: 2 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQCLRHH*PQLTFP
Trigger: TGGAAAGGTCAGCTGGGGCCAGTGGTGCCTCAGGCA...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTTTTATATGGGAGCTCTaGGGTGACTCTGGGTCCACA +
Preference number: 2 (lower is better)
Translates to: MALFAFPRRNASPVSCWTFIWEL*GDSGST
Trigger: TGTGGACCCAGAGTCACCCCAGAGCTCCCATATAAA...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCATGGTGGGGTTTGGTTaGTTCTGGTTTCTGGATGAG +
Preference number: 2 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGMVGFG*FWFLDE
Trigger: CTCATCCAGAAACCAGAACCAACCAAACCCCACCAT...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 90 bp CTCTGGAAAGGAGAAGTCATGATCACTGCTGTTTCAGGAACAACCTaGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGC +
Preference number: 2 (lower is better)
Translates to: LWKGEVMITAVSGTT*VTCQLRWWWREWNS
Trigger: GCTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCTGAAACAGCAGTGATCATGACTTCTCCTTTCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 90 bp GGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGGACACCCATGCTaGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGT +
Preference number: 2 (lower is better)
Translates to: GSCFLANTFFSGHPC*SQSVALGKPSMAIG
Trigger: ACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGAAAGTGTTGGCAAGAAAACATGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCAAGTGGGCAACGCACTaGAACTGGGGAATAAAACAA +
Preference number: 2 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFKWATH*NWGIKQ
Trigger: TTGTTTTATTCCCCAGTTTCAGTGCGTTGCCCACTT...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCCCCTACTCTGAAGGATaGTTTGGCCATAAAAGGGAT +
Preference number: 2 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGPYSEG*FGHKRD
Trigger: ATCCCTTTTATGGCCAAATCATCCTTCAGAGTAGGG...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGACCATGCAGCTTATCTaGGCACAGGATGCGCTTGTT +
Preference number: 2 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLTMQLI*AQDALV
Trigger: AACAAGCGCATCCTGTGCTCAGATAAGCTGCATGGT...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTGTCGTGTGTGGGAGCTaGAGCCTTAGGTTAAAATAC +
Preference number: 2 (lower is better)
Translates to: MALFAFPRRNASPVSCWTVVCGS*SLRLKY
Trigger: GTATTTTAACCTAAGGCTTCAGCTCCCACACACGAC...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCGACTTCAGTAAGGTTTaGGTTGAGAGTCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGDFSKV*VESPMV
Trigger: CACCATTGGACTCTCAACTCAAACCTTACTGAAGTC...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGACATAGAGTTATGTaGTCAAGTCCTGGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: QDSLNEACSVLPVGICHHRHRVM*SSPGGK
Trigger: CTTCCCACCAGGACTTGAGCACATAACTCTATGTCT...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTATTAATTGGAATGAATaGCCCAAGGCTGCTCTTAGT +
Preference number: 2 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGINWNE*PKAALS
Trigger: ACTAAGAGCAGCCTTGGGGCATTCATTCCAATTAAT...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCAGTTCCTCGAATGCCTaGTTTTGTAATGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFSSSNA*FCNAGG
Trigger: TCCACCTGCATTACAAAAGCAGGCATTCGAGGAACT...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCCAAGTCCCAGGTGGGTaGGATTTTATTCTTACCACA +
Preference number: 2 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFQVPGG*DFILTT
Trigger: TGTGGTAAGAATAAAATCCCACCCACCTGGGACTTG...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 90 bp GAAGGCTGTTGGCTGGGTCCCCAGATATTCTCAGGGCAAGATCTGTaGTGTTATAACCACCTGCCATCTGTTGGTGCAAATTTTCTGGAT +
Preference number: 2 (lower is better)
Translates to: EGCWLGPQIFSGQDL*CYNHLPSVGANFLD
Trigger: ATCCAGAAAATTTGCACCAACAGATGGCAGGTGGTTATAACACAACAGATCTTGCCCTGAGAATATCTGGGGACCCAGCCAACAGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 90 bp GAGTGTTGTGTGTTGGTAACTGAGTCACCAAAAGTCTGTTCTCCTTaGATTGCTAACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTAT +
Preference number: 2 (lower is better)
Translates to: ECCVLVTESPKVCSP*IANSSEATSGLPCY
Trigger: ATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGTTAGCAATCAAAGGAGAACAGACTTTTGGTGACTCAGTTACCAACACACAACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTAAATCCCTAAGAAACTaGCCATGCATGGTAAAGGGC +
Preference number: 2 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLKSLRN*PCMVKG
Trigger: GCCCTTTACCATGCATGGTCAGTTTCTTAGGGATTT...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTGTCATGGAGTCTGGCTaGACTTGCAATAGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: SLNEACSVLPVGICHHSRVMESG*TCNRRE
Trigger: TTCTCTTCTATTGCAAGTTCAGCCAGACTCCATGAC...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGAAACACTCCCAACCATaGAGCTTATCTGAGCACAGG +
Preference number: 2 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLKHSQP*SLSEHR
Trigger: CCTGTGCTCAGATAAGCTGCATGGTTGGGAGTGTTT...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGGGGCCTCAGCTGCAATaGAACATGTGGAGCCATCAG +
Preference number: 2 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQGPQLQ*NMWSHQ
Trigger: CTGATGGCTCCACATGTTGCATTGCAGCTGAGGCCC...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACCAGTTACGCTGGTGGTaGAGAGAATGGAACAGCTGG +
Preference number: 2 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHQLRWW*REWNSW
Trigger: CCAGCTGTTCCATTCTCTCCACCACCAGCGTAACTG...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCAAGGACCCAAAACTCTaGAAAGGAGAAGTCATGATC +
Preference number: 2 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFKDPKL*KGEVMI
Trigger: GATCATGACTTCTCCTTTCCAGAGTTTTGGGTCCTT...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTCAGACAGGAAAGCATTaGCTTCGAGAGAATCACAGT +
Preference number: 2 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACQTGKH*LRENHS
Trigger: ACTGTGATTCTCTCGAAGCCAATGCTTTCCTGTCTG...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTGGCTTTTCTCGGTTTTaGAAGAATTCAGCCCACAGA +
Preference number: 2 (lower is better)
Translates to: SLNEACSVLPVGICHHSRGFSRF*KNSAHR
Trigger: TCTGTGGGCTGAATTCTTCCAAAACCGAGAAAAGCC...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGTGCTCAAGTCCTGGTaGGAAGTGAAATTCCTGTAC +
Preference number: 2 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLVLKSW*EVKFLY
Trigger: GTACAGGAATTTCACTTCCCACCAGGACTTGAGCAC...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAAATCAAAGGAATGGCTaGCCAAACCAGGATGGTATT +
Preference number: 2 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQNQRNG*PNQDGI
Trigger: AATACCATCCTGGTTTGGTCAGCCATTCCTTTGATT...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACCGCAAGAAACACAAATaGCAGTTAGATAGTTCCTAC +
Preference number: 2 (lower is better)
Translates to: QDSLNEACSVLPVGICHHRKKHK*QLDSSY
Trigger: GTAGGAACTATCTAACTGGCATTTGTGTTTCTTGCG...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGTGCCAGTTACGCTGGTaGTGGAGAGAATGGAACAGC +
Preference number: 2 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQCQLRW*WREWNS
Trigger: GCTGTTCCATTCTCTCCACCACCAGCGTAACTGGCA...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTGAAATCAGACTGCACTaGCTTTTCTCGGTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: SLNEACSVLPVGICHHSREIRLH*LFSVLE
Trigger: TTCCAAAACCGAGAAAAGCCAGTGCAGTCTGATTTC...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTTATTCTAGAATGATCTaGGCAGTGTGGGATGCAGTT +
Preference number: 2 (lower is better)
Translates to: MALFAFPRRNASPVSCWTYSRMI*AVWDAV
Trigger: AACTGCATCCCACACTGCCCAGATCATTCTAGAATA...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTTGTACTTTTAGGTGCTaGGCTCAAATTCTGTCTGCT +
Preference number: 2 (lower is better)
Translates to: MALFAFPRRNASPVSCWTCTFRC*AQILSA
Trigger: AGCAGACAGAATTTGAGCCCAGCACCTAAAAGTACA...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 90 bp CTCTGGGAAGTGTTTAATCCTGCATCAAATACAGACAGGAAAGCATaGGCTTCGAGAGAATCACAGTTCACTGTAAAGGCAAGCCGGTGT +
Preference number: 2 (lower is better)
Translates to: LWEVFNPASNTDRKA*ASRESQFTVKASRC
Trigger: ACACCGGCTTGCCTTTACAGTGAACTGTGATTCTCTCGAAGCCAATGCTTTCCTGTCTGTATTTGATGCAGGATTAAACACTTCCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR TCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGTTGTGTGTTGGTAACTaGGTCACCAAAAGTCTGTTC +
Preference number: 2 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLLCVGN*VTKSLF
Trigger: GAACAGACTTTTGGTGACTCAGTTACCAACACACAA...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAACATTCTTCCCTTAGATaGCACCTCACACAAATAGTA +
Preference number: 2 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQHSSLR*HLTQIV
Trigger: TACTATTTGTGTGAGGTGGCATCTAAGGGAAGAATG...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGTTTGGGGGAACAACATaGACAGAATGTCTGAGTGTT +
Preference number: 2 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLFGGTT*TECLSV
Trigger: AACACTCAGACATTCTGTGCATGTTGTTCCCCCAAA...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTATAGTTCCTACACTGTaGTTATTTACCAGACTAGAA +
Preference number: 2 (lower is better)
Translates to: THACLKVWHWVSPQWPSVIVPTL*LFTRLE
Trigger: TTCTAGTCTGGTAAATAACCACAGTGTAGGAACTAT...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAGGTAATCCATGCTCATaGAAGCAACTTACTTTCAAG +
Preference number: 2 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQGNPCS*KQLTFK
Trigger: CTTGAAAGTAAGTTGCTTCCATGAGCATGGATTACC...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGTTGAGAGTCCAATGGTaGGTTCATGTTTTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLLRVQW*VHVFLP
Trigger: TGGCAAGAAAACATGAACCCACCATTGGACTCTCAA...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCATATTTCTATGCTTATaGCTTCCACTTTTTCCCAAC +
Preference number: 2 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGIFLCL*LPLFPN
Trigger: GTTGGGAAAAAGTGGAAGGCATAAGCATAGAAATAT...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAGATTTAGTTTGTTCTTaGCAATCCCCAAAATCAGAG +
Preference number: 2 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQDLVCS*QSPKSE
Trigger: CTCTGATTTTGGGGATTGGCAAGAACAAACTAAATC...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGGGATCAGATGAGTCATaGAGTCTGGCTGAACTTGCA +
Preference number: 2 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQGSDES*SLAELA
Trigger: TGCAAGTTCAGCCAGACTCCATGACTCATCTGATCC...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 90 bp TCAGTAAGGTTTGAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTaGCCAACACTTTCTTTTCAGGACACCCATGCTTGTCTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: SVRFELRVQWWVHVF*PTLSFQDTHACLKV
Trigger: CACTTTGAGACAAGCATGGGTGTCCTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTCAAACCTTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR GCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGAGAAGTCATGATCACTaGTGTTTCAGGAACAACCTT +
Preference number: 2 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQRSHDH*CFRNNL
Trigger: AAGGTTGTTCCTGAAACAGCAGTGATCATGACTTCT...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 90 bp TTACTTCTCCTGCTGTTCCTTCTGCTGCCAAGACTAATTTACCTATaGGACTTTATGAGGGAATATACTAGAGTAACCTATCATGAAGGT +
Preference number: 2 (lower is better)
Translates to: LLLLLFLLLPRLIYL*DFMREYTRVTYHEG
Trigger: ACCTTCATGATAGGTTACTCTAGTATATTCCCTCATAAAGTCCAATAGGTAAATTAGTCTTGGCAGCAGAAGGAACAGCAGGAGAAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp CTGCCTAAGAGGCCACAACGCCCAAGCATGCTCCTTTaGTCAGAGACCCAGGACCTCAGCTGGGTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: LPKRPQRPSMLL*SETQDLSWVAV
Trigger: CACAGCCACCCAGCTGAGGTCCTGGGTCTCTGAGCAAAGGAGCATGCTTGGGCGTTGTGGCCTCTTAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 72 bp CAGAAGCTGAGAGCAGGAGCCCCGTCGCTTCTGCAGTaGGCATCAGAAGTGTCCGGGGAGGAGGACTTGGTT +
Preference number: 3 (lower is better)
Translates to: QKLRAGAPSLLQ*ASEVSGEEDLV
Trigger: AACCAAGTCCTCCTCCCCGGACACTTCTGATGCCCACTGCAGAAGCGACGGGGCTCCTGCTCTCAGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp ACACGCAGTGCAGACGAGAGTCCCAAGCTTCCCAGCTaGACCAGGTCCACATGGCACTTGAAACAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: TRSADESPKLPS*TRSTWHLKQAA
Trigger: GGCAGCCTGTTTCAAGTGCCATGTGGACCTGGTGCAGCTGGGAAGCTTGGGACTCTCGTCTGCACTGCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp CACGGCAGCCAGAGGGCGCCTCTGAGCAGGACAGTCTaGATGAGGCTTGCTCAGTTTTACCCGTGGGCATTT +
Preference number: 3 (lower is better)
Translates to: HGSQRAPLSRTV*MRLAQFYPWAF
Trigger: AAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTGCTCAGAGGCGCCCTCTGGCTGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp CACAGTCATGTTCACAAGCCATCTCTTCCGCAGGAGTaGCCTGCCTTGAAGGCTGTTGGCTGGGTCCCCAGA +
Preference number: 3 (lower is better)
Translates to: HSHVHKPSLPQE*PALKAVGWVPR
Trigger: TCTGGGGACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTGAACATGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACCAGGAGTGCCCTGCCTaGAAGGCTGTTGGCTGGGTC +
Preference number: 3 (lower is better)
Translates to: QDSLNEACSVLPVGICHHQECPA*KAVGWV
Trigger: GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTG...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp TTCACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTaGAGGCTGTTGGCTGGGTCCCCAGATATTCTCAGG +
Preference number: 3 (lower is better)
Translates to: FTSHLFRRSALP*RLLAGSPDILR
Trigger: CCTGAGAATATCTGGGGACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp CAGCTGCACCAGGTCCACATGGCACTTGAAACAGGCTaGCTAAGAGGCCACAACGCCCAAGCATGCTCCTTT +
Preference number: 3 (lower is better)
Translates to: QLHQVHMALETG*LRGHNAQACSF
Trigger: AAAGGAGCATGCTTGGGCGTTGTGGCCTCTTAGGCAGCCTGTTTCAAGTGCCATGTGGACCTGGTGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp ATAGGCACAGACTTCACTGCTTCAGAGGACACGCAGTaGAGACGAGAGTCCCAAGCTTCCCAGCTGCACCAG +
Preference number: 3 (lower is better)
Translates to: IGTDFTASEDTQ*RRESQASQLHQ
Trigger: CTGGTGCAGCTGGGAAGCTTGGGACTCTCGTCTGCACTGCGTGTCCTCTGAAGCAGTGAAGTCTGTGCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 72 bp ATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTaGCTGGGTCCCCAGATATTCTCAGGGCAAGATCTG +
Preference number: 3 (lower is better)
Translates to: ISSAGVPCLEGC*LGPQIFSGQDL
Trigger: CAGATCTTGCCCTGAGAATATCTGGGGACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 72 bp GCTACCACCCTGGCCCGAACCACCATCACCTCTCTCTaGTCACCTTCATACCTCCAGCACTCAAGTCTTCCA +
Preference number: 3 (lower is better)
Translates to: ATTLARTTITSL*SPSYLQHSSLP
Trigger: TGGAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTCGGGCCAGGGTGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCTGGCTTTTCTCGGTTTaGGAAGAATTCAGCCCACAG +
Preference number: 3 (lower is better)
Translates to: HKPSLPQECPALKAVGWVWLFSV*EEFSPQ
Trigger: CTGTGGGCTGAATTCTTCCAAAACCGAGAAAAGCCA...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp CCCATGGTCTTCAAAGCAGCTCAGGCTAAGACAGGCTaGTGTACTTCATGCCGGTCAACCAGATGCTCGGGC +
Preference number: 3 (lower is better)
Translates to: PMVFKAAQAKTG*CTSCRSTRCSG
Trigger: GCCCGAGCATCTGGTTGACCGGCATGAAGTACATCAGCCTGTCTTAGCCTGAGCTGCTTTGAAGACCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp TCATGTTCACAAGCCATCTCTTCCGCAGGAGTGCCCTaGCTTGAAGGCTGTTGGCTGGGTCCCCAGATATTC +
Preference number: 3 (lower is better)
Translates to: SCSQAISSAGVP*LEGCWLGPQIF
Trigger: GAATATCTGGGGACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTGAACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp GAGGGCGCCTCTGAGCAGGACAGTCTGAATGAGGCTTaGTCAGTTTTACCCGTGGGCATTTGTCACCACAGT +
Preference number: 3 (lower is better)
Translates to: EGASEQDSLNEA*SVLPVGICHHS
Trigger: ACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTGCTCAGAGGCGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTGTGCTAGGCCGGTaGAGCCCATTTAGGACAGGG +
Preference number: 3 (lower is better)
Translates to: QDSLNEACSVLPVGICHHSVLGR*SPFRTG
Trigger: CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACT...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 72 bp CCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTaGGGTTTGGTTGGTTCTGGTTTCTGGATGAGAGTC +
Preference number: 3 (lower is better)
Translates to: PPKRPQAFPVIW*GLVGSGFWMRV
Trigger: GACTCTCATCCAGAAACCAGAACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp GACCAGACCAGCCTTCTTCTGAGCAAATGGCAGTGGTaGCCATCTCCACTAAGCCTCAACGTGCGAGAAAAA +
Preference number: 3 (lower is better)
Translates to: DQTSLLLSKWQW*PSPLSLNVREK
Trigger: TTTTTCTCGCACGTTGAGGCTTAGTGGAGATGGGCACCACTGCCATTTGCTCAGAAGAAGGCTGGTCTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 72 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATaGTGGGGTTTGGTTGGTTCTGGTTTCTGGATGAGA +
Preference number: 3 (lower is better)
Translates to: TPPKRPQAFPVI*WGLVGSGFWMR
Trigger: TCTCATCCAGAAACCAGAACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCAACAACCTTGGTAACTaGCCAGTTACGCTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFNNLGN*PVTLVV
Trigger: CACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTT...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp TCACTAGAAAAGGTGGGCAAGAGCTTCCTTAGCATCTCCAGAGGGTGGGATGAATCCGGGGAGGAGGACTaGGTTCTAACAGTGGAACAA +
Preference number: 3 (lower is better)
Translates to: SLEKVGKSFLSISRGWDESGEED*VLTVEQ
Trigger: TTGTTCCACTGTTAGAACCAAGTCCTCCTCCCCGGA...TTCATCCCACCCTCTGGAGATGCTAAGGAAGCTCTTGCCCACCTTTTCTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp TCACTAGAAAAGGTGGGCAAGAGCTTCCTTAGCATCTCCAGAGGGTGGGATGAATCAGGACACCCATGCTaGTCTCAAAGTGTGGCACTG +
Preference number: 3 (lower is better)
Translates to: SLEKVGKSFLSISRGWDESGHPC*SQSVAL
Trigger: CAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGA...TTCATCCCACCCTCTGGAGATGCTAAGGAAGCTCTTGCCCACCTTTTCTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp GCTAACACACCCCTCTGTCCAGTCGTGTGTGGGAGCTaGAGCCTTAGGTTAAAATACGAGATGCACTTCTCC +
Preference number: 3 (lower is better)
Translates to: ANTPLCPVVCGS*SLRLKYEMHFS
Trigger: GGAGAAGTGCATCTCGTATTTTAACCTAAGGCTTCAGCTCCCACACACGACTGGACAGAGGGGTGTGTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp AAATGGATTATATGTCCAGAATCTGGCCACCTCTCATaGCATCTCTGGCTACCACCCTGGCCCGAACCACCA +
Preference number: 3 (lower is better)
Translates to: KWIICPESGHLS*HLWLPPWPEPP
Trigger: TGGTGGTTCGGGCCAGGGTGGTAGCCAGAGATGTCATGAGAGGTGGCCAGATTCTGGACATATAATCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp TTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTaGTGGACTGGAATAAATGGAGGGAAGGGTGGCAAG +
Preference number: 3 (lower is better)
Translates to: FAFPRRNASPVS*WTGINGGKGGK
Trigger: CTTGCCACCCTTCCCTCCATTTATTCCAGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 72 bp CATGCAGCTTATCTGAGCACAGGATGCGCTTGTTGCTaGGGTAGCCACATGTATATGCTTCTGGAACTCCTG +
Preference number: 3 (lower is better)
Translates to: HAAYLSTGCACC*GSHMYMLLELL
Trigger: CAGGAGTTCCAGAAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGCTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 72 bp GTACTTTTAGGTGCTGGGCTCAAATTCTGTCTGCTGTaGTCATTAACGGGAAGAGGTGGCCAGTTGTGTGGG +
Preference number: 3 (lower is better)
Translates to: VLLGAGLKFCLL*SLTGRGGQLCG
Trigger: CCCACACAACTGGCCACCTCTTCCCGTTAATGACCACAGCAGACAGAATTTGAGCCCAGCACCTAAAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGTGATGACCATGCTTaGGGGGAACAACATGCACAG +
Preference number: 3 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQCDDHA*GEQHAQ
Trigger: CTGTGCATGTTGTTCCCCCAAAGCATGGTCATCACA...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTCACTCGTGCATTTCCTaGATGGGAATGTTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: MALFAFPRRNASPVSCWTHSCIS*MGMFLL
Trigger: CAGCAGGAACATTCCCATCAAGGAAATGCACGAGTG...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp TGGCACTGGGTAAGCCCTCAATGGCCATCGGTTAAATaGATAACTGAGGTCTATGACCCCAAACTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: WHWVSPQWPSVK*ITEVYDPKLGK
Trigger: CTTGCCCAGTTTGGGGTCATAGACCTCAGTTATTCATTTAACCGATGGCCATTGAGGGCTTACCCAGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp AACCATGCAGCTTATCTGAGCACAGGATGCGCTTGTTaGTGGGGTAGCCACATGTATATGCTTCTGGAACTC +
Preference number: 3 (lower is better)
Translates to: NHAAYLSTGCAC*WGSHMYMLLEL
Trigger: GAGTTCCAGAAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGCTGCATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAGTTTCAGGAACAACCTaGGTAACTTGCCAGTTACGC +
Preference number: 3 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQVSGTT*VTCQLR
Trigger: GCGTAACTGGCAAGTTACCAAGGTTGTTCCTGAAAC...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTATCAGCACTTCGAAGTaGGAAACACAAGACCCCATG +
Preference number: 3 (lower is better)
Translates to: SLNEACSVLPVGICHHSRISTSK*ETQDPM
Trigger: CATGGGGTCTTGTGTTTCCAACTTCGAAGTGCTGAT...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCTCAGTAAGGTTTGAGTaGAGAGTCCAATGGTGGGTT +
Preference number: 3 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFSVRFE*RVQWWV
Trigger: AACCCACCATTGGACTCTCAACTCAAACCTTACTGA...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 72 bp CTTTCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTaGCACTGGGTAAGCCCTCAATGGCCATCGGTTAAA +
Preference number: 3 (lower is better)
Translates to: LSFQDTHACLKV*HWVSPQWPSVK
Trigger: TTTAACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTACTCTGAAGGATGATTaGGCCATAAAAGGGATCAGA +
Preference number: 3 (lower is better)
Translates to: MALFAFPRRNASPVSCWTTLKDD*AIKGIR
Trigger: TCTGATCCCTTTTATGGCCAAATCATCCTTCAGAGT...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTCTAACTCCTTCAAGCTaGCTCCATTTCACTCAAGTT +
Preference number: 3 (lower is better)
Translates to: MALFAFPRRNASPVSCWTLTPSS*LHFTQV
Trigger: AACTTGAGTGAAATGGAGCAAGCTTGAAGGAGTTAG...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp GACCATGCTTTGGGGGAACAACATGCACAGAATGTCTaGGTGTTCCCTACTCTGAAGGATGATTTGGCCATA +
Preference number: 3 (lower is better)
Translates to: DHALGEQHAQNV*VFPTLKDDLAI
Trigger: TATGGCCAAATCATCCTTCAGAGTAGGGAACACTCAGACATTCTGTGCATGTTGTTCCCCCAAAGCATGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp CTGTACACTTTGTCCAAAAACACTCGTGCATTTCCTTaGTGGGAATGTTCCTGCTGGTCAGTGTCTTTCCCC +
Preference number: 3 (lower is better)
Translates to: LYTLSKNTRAFP*WECSCWSVSFP
Trigger: GGGGAAAGACACTGACCAGCAGGAACATTCCCATCAAGGAAATGCACGAGTGTTTTTGGACAAAGTGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 72 bp CTTAGTTTCTCTGTGAAGCATTTTATATGGGAGCTCTaGGGTGACTCTGGGTCCACAGTCATGTTCACAAGC +
Preference number: 3 (lower is better)
Translates to: LSFSVKHFIWEL*GDSGSTVMFTS
Trigger: GCTTGTGAACATGACTGTGGACCCAGAGTCACCCCAGAGCTCCCATATAAAATGCTTCACAGAGAAACTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAAATAAGCCAAGGAGGTaGTCAGTACAAACCTGTTTA +
Preference number: 3 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQNKPRR*SVQTCL
Trigger: TAAACAGGTTTGTACTGACAACCTCCTTGGCTTATT...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR-3UTR CAA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGACCTATCATGAAGGTTaGTCCTATGCAAAGTTCCTA +
Preference number: 3 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLTYHEG*SYAKFL
Trigger: TAGGAACTTTGCATAGGACAAACCTTCATGATAGGT...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp TGCACAGAATGTCTGAGTGTTCCCTACTCTGAAGGATaGTTTGGCCATAAAAGGGATCAGATGAGTCATGGA +
Preference number: 3 (lower is better)
Translates to: CTECLSVPYSEG*FGHKRDQMSHG
Trigger: TCCATGACTCATCTGATCCCTTTTATGGCCAAATCATCCTTCAGAGTAGGGAACACTCAGACATTCTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp GCTTTATTAATTAAGCCCCAGAATGATGGCTTTGTTTaGCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTG +
Preference number: 3 (lower is better)
Translates to: ALLIKPQNDGFV*LPKKKCIPSQL
Trigger: CAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATTCTGGGGCTTAATTAATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp ATGCCACCTCACACAAATAGTAAATCCCTAAGAAACTaGCCATGCATGGTAAAGGGCTACTTCCAAAGATGG +
Preference number: 3 (lower is better)
Translates to: MPPHTNSKSLRN*PCMVKGYFQRW
Trigger: CCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTTCTTAGGGATTTACTATTTGTGTGAGGTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp CTGGCCCCAGCTGACCTTTCCAATCAAAGGAATGGCTaGCCAAACCAGGATGGTATTAAGAAATTCTATAAA +
Preference number: 3 (lower is better)
Translates to: LAPADLSNQRNG*PNQDGIKKFYK
Trigger: TTTATAGAATTTCTTAATACCATCCTGGTTTGGTCAGCCATTCCTTTGATTGGAAAGGTCAGCTGGGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR GCA 72 bp TTGATTTTCTCTGTACACTTTGTCCAAAAACACTCGTaGATTTCCTTGATGGGAATGTTCCTGCTGGTCAGT +
Preference number: 3 (lower is better)
Translates to: LIFSVHFVQKHS*ISLMGMFLLVS
Trigger: ACTGACCAGCAGGAACATTCCCATCAAGGAAATGCACGAGTGTTTTTGGACAAAGTGTACAGAGAAAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 72 bp CTGACTTCAGTAAGGTTTGAGTTGAGAGTCCAATGGTaGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAG +
Preference number: 3 (lower is better)
Translates to: LTSVRFELRVQW*VHVFLPTLSFQ
Trigger: CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTCAAACCTTACTGAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR TCA 72 bp ACATTAGAAACCCATTTAAAACGGCAGGTAAGAGCATaGACAAAAGCAAAGTTTAGTTCCTCGAATGCCTGC +
Preference number: 3 (lower is better)
Translates to: TLETHLKRQVRA*TKAKFSSSNAC
Trigger: GCAGGCATTCGAGGAACTAAACTTTGCTTTTGTTCATGCTCTTACCTGCCGTTTTAAATGGGTTTCTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CCA 72 bp TGTAAACCTAGTCAGTCTCTATTAAAAAGTAGCTACTaGGTAATCCATGCTCATGGAAGCAACTTACTTTCA +
Preference number: 3 (lower is better)
Translates to: CKPSQSLLKSSY*VIHAHGSNLLS
Trigger: TGAAAGTAAGTTGCTTCCATGAGCATGGATTACCCAGTAGCTACTTTTTAATAGAGACTGACTAGGTTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCCCGTCGCTTCTGCAGTaGGCATCAGAAGTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVPSLLQ*ASEVSG
Trigger: CCCGGACACTTCTGATGCCCACTGCAGAAGCGACGG...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTGCTCCATCCGCCGCCTaGGCCCGGGCTCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLNEACSVLPVGICHHSRAPSAA*ARALSC
Trigger: GCAGGACAGAGCCCGGGCGCAGGCGGCGGATGGAGC...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGCAAACTGGGCAAGGCTaGCCCACCCAAAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGQTGQG*PTQSHQ
Trigger: TTGGTGGCTTTGGGTGGGTCAGCCTTGCCCAGTTTG...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCTCAGAGGACACGCAGTaGAGACGAGAGTCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVSEDTQ*RRESQA
Trigger: AGCTTGGGACTCTCGTCTGCACTGCGTGTCCTCTGA...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGGAGCCCCGTCGCTTCTaGAGTGGGCATCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGEPRRF*SGHQKC
Trigger: ACACTTCTGATGCCCACTGCAGAAGCGACGGGGCTC...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCTGTCTTTCCCCTGCCTaGCATGTGCTTTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVCLSPA*HVLCCR
Trigger: ACGGCAGCAAAGCACATGGCAGGCAGGGGAAAGACA...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCTCTATGACCCCAAACTaGGCAAGGCTGACCCACCCA +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVSMTPN*ARLTHP
Trigger: TGGGTGGGTCAGCCTTGCCCAGTTTGGGGTCATAGA...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTTTGTGTGGGCCTGCCTaGGGCACCACTGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SLNEACSVLPVGICHHSRLCGPA*GTTGPS
Trigger: GCTGGGGCCAGTGGTGCCTCAGGCAGGCCCACACAA...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTGCCCCAGTGGGTACTTaGTGCTGCAGCTCAGGGATC +
Preference number: 4 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGAPVGT*CCSSGI
Trigger: GATCCCTGAGCTGCAGCAGCAAGTACCCACTGGGGC...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGTCTCTTCCGCAGGAGTaGCCTGCCTTGAAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGSLPQE*PALKAV
Trigger: AACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGA...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCCCTGGTTTGGAGATTTaGGTGCACAGGCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVPGLEI*VHRLLV
Trigger: AACCAGGAGCCTGTGCACCCAAATCTCCAAACCAGG...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCATCAGGAAAGGAAAGTaGCACGCCACCCGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVIRKGK*HATRVD
Trigger: GTCTACACGGGTGGCGTGCCACTTTCCTTTCCTGAT...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCACAACCTTGGTAACTTaGCAGTTACGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVTTLVT*QLRWWW
Trigger: CCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGT...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTCCAGTTGTGTGGGCCTaGCTGAGGCACCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLPVVWA*LRHHWP
Trigger: GGGCCAGTGGTGCCTCAGGCAGGCCCACACAACTGG...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCTCAGCTGGGTGGCTGTaGACTCAGGGCCACCCTTCC +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGSAGWL*TQGHPS
Trigger: GGAAGGGTGGCCCTGAGTCCACAGCCACCCAGCTGA...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCACCCAGGACCTCAGCTaGGTGGCTGTGGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGTQDLS*VAVDSG
Trigger: CCCTGAGTCCACAGCCACCCAGCTGAGGTCCTGGGT...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTTGCCTGAGGCACCACTaGCCCCAGCTGACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVCLRHH*PQLTFP
Trigger: TGGAAAGGTCAGCTGGGGCCAGTGGTGCCTCAGGCA...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCAGTCAGCTGCTGGACTaGAATAAATGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVSQLLD*NKWREG
Trigger: CCCTTCCCTCCATTTATTCCAGTCCAGCAGCTGACT...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 72 bp GTTCACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTaGAAGGCTGTTGGCTGGGTCCCCAGATATTCTCAG +
Preference number: 4 (lower is better)
Translates to: VHKPSLPQECPA*KAVGWVPRYSQ
Trigger: CTGAGAATATCTGGGGACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTAGACCAGCCTTCTTCTaGGCAAATGGCAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGRPAFF*ANGSGA
Trigger: GGCACCACTGCCATTTGCTCAGAAGAAGGCTGGTCT...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCGTCGTGTGTGGGAGCTaGAGCCTTAGGTTAAAATAC +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVVVCGS*SLRLKY
Trigger: GTATTTTAACCTAAGGCTTCAGCTCCCACACACGAC...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTGCTGTGACAGAAGCTaGGAGCAGGAGCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACCCDRS*EQEPRR
Trigger: GCGACGGGGCTCCTGCTCTCAGCTTCTGTCACAGCA...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTAGGAGTGCCCTGCCTTaGAGGCTGTTGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACRSALP*RLLAGS
Trigger: GGACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCT...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTGGCTTCTGTGGCCATTaGTTCTCAAGACCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGGFCGH*FSRPLA
Trigger: GGCTAGGGGTCTTGAGAAGCAATGGCCACAGAAGCC...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTCACACCTCCACGCCCTaGGATTTCTGCAGACTCGGT +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVHTSTP*DFCRLG
Trigger: ACCGAGTCTGCAGAAATCCCAGGGCGTGGAGGTGTG...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTGGCTGGAGGCGGAGATaGTATATGATGAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGGWRRR*YMMSAH
Trigger: GTGTGCGCTCATCATATACCATCTCCGCCTCCAGCC...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCTCAGTTGCAGTGAGCTaGCCTTTTTGGCAACGGTTT +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVSVAVS*PFWQRF
Trigger: AAACCGTTGCCAAAAAGGCCAGCTCACTGCAACTGA...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTAGGACCTCAGCTGGGTaGCTGTGGACTCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: MALFAFPRRNASPVSCWTRTSAG*LWTQGH
Trigger: GTGGCCCTGAGTCCACAGCCACCCAGCTGAGGTCCT...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCGGATCAGATGAGTCATaGAGTCTGGCTGAACTTGCA +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVGSDES*SLAELA
Trigger: TGCAAGTTCAGCCAGACTCCATGACTCATCTGATCC...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCGTGATGACCATGCTTTaGGGGAACAACATGCACAGA +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVVMTML*GNNMHR
Trigger: TCTGTGCATGTTGTTCCCCCAAAGCATGGTCATCAC...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCGTGCTCAAGTCCTGGTaGGAAGTGAAATTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVVLKSW*EVKFLY
Trigger: GTACAGGAATTTCACTTCCCACCAGGACTTGAGCAC...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCGTTGCCTTAATGGACTaGGAAAACAGATGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVVALMD*ENRCSC
Trigger: GCAGGAACATCTGTTTTCTCAGTCCATTAAGGCAAC...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGCTCCTGGTTTTTGGCTaGTTGGCAACTCATAGGGAA +
Preference number: 4 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGLLVFG*LATHRE
Trigger: TTCCCTATGAGTTGCCAAGCAGCCAAAAACCAGGAG...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTCCCAAGCTTCCCAGCTaGACCAGGTCCACATGGCAC +
Preference number: 4 (lower is better)
Translates to: MALFAFPRRNASPVSCWTPKLPS*TRSTWH
Trigger: GTGCCATGTGGACCTGGTGCAGCTGGGAAGCTTGGG...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACAGCAAATGGCAGTGGTaGCCATCTCCACTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNSKWQW*PSPLSL
Trigger: GAGGCTTAGTGGAGATGGGCACCACTGCCATTTGCT...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp TCACTAGAAAAGGTGGGCAAGAGCTTCCTTAGCATCTCCAGAGGGTGGGATGAATCCGCAGGAGTGCCCTaGCTTGAAGGCTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLEKVGKSFLSISRGWDESAGVP*LEGCWL
Trigger: CAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGA...TTCATCCCACCCTCTGGAGATGCTAAGGAAGCTCTTGCCCACCTTTTCTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTGGGTGCACAGGCTCCTaGTTTTTGGCTGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVGCTGS*FLAAWQ
Trigger: TTGCCAAGCAGCCAAAAACCAGGAGCCTGTGCACCC...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTCCCAGCACAGACTTGTaGGGGATTCTGCACTCTTGC +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVPSTDL*GILHSC
Trigger: GCAAGAGTGCAGAATCCCCCACAAGTCTGTGCTGGG...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACCAGTTACGCTGGTGGTaGAGAGAATGGAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNQLRWW*REWNSW
Trigger: CCAGCTGTTCCATTCTCTCCACCACCAGCGTAACTG...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACCTGAGCAAATGGCAGTaGTGCCCATCTCCACTAAGC +
Preference number: 4 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNLSKWQ*CPSPLS
Trigger: GCTTAGTGGAGATGGGCACCACTGCCATTTGCTCAG...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp TCACTAGAAAAGGTGGGCAAGAGCTTCCTTAGCATCTCCAGAGGGTGGGATGAAATGGGAGCTCTGGGGTaGCTCTGGGTCCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: SLEKVGKSFLSISRGWDEMGALG*LWVHSH
Trigger: ATGACTGTGGACCCAGAGTCACCCCAGAGCTCCCAT...TTCATCCCACCCTCTGGAGATGCTAAGGAAGCTCTTGCCCACCTTTTCTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTTCTGGCCACCTCTCATaGCATCTCTGGCTACCACCC +
Preference number: 4 (lower is better)
Translates to: MALFAFPRRNASPVSCWTSGHLS*HLWLPP
Trigger: GGGTGGTAGCCAGAGATGTCATGAGAGGTGGCCAGA...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACGCTACACTCAGGTGGTaGTATATTCACAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNATLRW*YIHRGF
Trigger: GAAGCCCCTGTGAATATAGCACCACCTGAGTGTAGC...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACGCACTTGAAACAGGCTaGCTAAGAGGCCACAACGCC +
Preference number: 4 (lower is better)
Translates to: QDSLNEACSVLPVGICHHALETG*LRGHNA
Trigger: GGCGTTGTGGCCTCTTAGGCAGCCTGTTTCAAGTGC...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTTGCCGGTCAACCAGATaGTCGGGCACATGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLCRSTR*SGTWSL
Trigger: GAGAGACCATGTGCCCGAGCATCTGGTTGACCGGCA...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTACAGGGGGCCTCAGCTaGAATGCAACATGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SLNEACSVLPVGICHHSRTGGLS*NATCGA
Trigger: GGCTCCACATGTTGCATTGCAGCTGAGGCCCCCTGT...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCAAGAGGAAGCCCCAGTaGGTACTTGCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGKRKPQ*VLAAAA
Trigger: AGCTGCAGCAGCAAGTACCCACTGGGGCTTCCTCTT...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTGTGAGCTGGCCTTTTTaGCAACGGTTTCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVVSWPF*QRFPQP
Trigger: AGGCTGTGGAAACCGTTGCCAAAAAGGCCAGCTCAC...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTAGCAACCTTGGTTCTTaGTCCGATGGTTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGSNLGS*SDGSSR
Trigger: TCTGGAGGAACCATCGGACCAAGAACCAAGGTTGCT...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACATGATCTGGGCAGTGTaGGATGCAGTTAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNMIWAV*DAVRTR
Trigger: TCTGGTCCTAACTGCATCCCACACTGCCCAGATCAT...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTGCTTGTCTCAAAGTGTaGCACTGGGTAAGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGACLKV*HWVSPQ
Trigger: TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGC...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGGGGTTTGGTTGGTTCTaGTTTCTGGATGAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGGFGWF*FLDESQ
Trigger: TTGACTCTCATCCAGAAACCAGAACCAACCAAACCC...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTGGTCCACATGGCACTTaGAACAGGCTGCCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLNEACSVLPVGICHHSRGPHGT*NRLPKR
Trigger: CCTCTTAGGCAGCCTGTTTCAAGTGCCATGTGGACC...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCCAGGCTAAGACAGGCTaGTGTACTTCATGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFQAKTG*CTSCRS
Trigger: TGACCGGCATGAAGTACATCAGCCTGTCTTAGCCTG...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCACCACTGGCCCCAGCTaGCCTTTCCAATCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGTTGPS*PFQSKE
Trigger: TTCCTTTGATTGGAAAGGTCAGCTGGGGCCAGTGGT...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGTGGCCATCGGTTAAATaGATAACTGAGGTCTATGAC +
Preference number: 4 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGWPSVK*ITEVYD
Trigger: GTCATAGACCTCAGTTATTCATTTAACCGATGGCCA...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTACGCCCTGGGATTTCTaGAGACTCGGTCTTGTCCGT +
Preference number: 4 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACTPWDF*RLGLVR
Trigger: ACGGACAAGACCGAGTCTGCAGAAATCCCAGGGCGT...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTCCAGTGGGTACTTGCTaGTGCAGCTCAGGGATCTCA +
Preference number: 4 (lower is better)
Translates to: SLNEACSVLPVGICHHSRPVGTC*CSSGIS
Trigger: TGAGATCCCTGAGCTGCAGCAGCAAGTACCCACTGG...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCCATCTTCCAGTGAGATaGCCAGCACAGACTTGTGGG +
Preference number: 4 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFHLPVR*PAQTCG
Trigger: CCCACAAGTCTGTGCTGGGCATCTCACTGGAAGATG...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCAGGCACAGACTTCACTaGTTCAGAGGACACGCAGTG +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGRHRLH*FRGHAV
Trigger: CACTGCGTGTCCTCTGAAGCAGTGAAGTCTGTGCCT...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAGGGCCTCAGCTGCAATaGAACATGTGGAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQGPQLQ*NMWSHQ
Trigger: CTGATGGCTCCACATGTTGCATTGCAGCTGAGGCCC...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTGCCTGCCATGTGCTTTaGTGCCGTGGTGGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLACHVL*CRGGCL
Trigger: CAAACAACCACCACGGCAGCAAAGCACATGGCAGGC...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCACCCCTGCCTGCCATGTaGTTTGCTGCCGTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: KGLLPKMGSTACFFKILAPLPAM*FAAVVV
Trigger: AACCACCACGGCAGCAAAGCACATGGCAGGCAGGGG...TGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGGTCTTGTCCGTCCCTTaGCGGACTTGGGCCTTATCA +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQVLSVP*RTWALS
Trigger: TGATAAGGCCCAAGTCCGCCAAGGGACGGACAAGAC...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGTTGCAAATCATCTGTTaGCCGGAAATGGCGTACAAA +
Preference number: 4 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGLQIIC*PEMAYK
Trigger: TTTGTACGCCATTTCCGGCCAACAGATGATTTGCAA...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTCAGAAAATCGCCTCCTaGGCACCTCCATTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGQKIAS*APPLFQ
Trigger: TTGAAACAATGGAGGTGCCCAGGAGGCGATTTTCTG...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTGCACCAGGTCCACATaGCACTTGAAACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACCTRST*HLKQAA
Trigger: GGCAGCCTGTTTCAAGTGCCATGTGGACCTGGTGCA...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCTGCCAGTTACGCTGGTaGTGGAGAGAATGGAACAGC +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGCQLRW*WREWNS
Trigger: GCTGTTCCATTCTCTCCACCACCAGCGTAACTGGCA...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCGGTAATCCATGCTCATaGAAGCAACTTACTTTCAAG +
Preference number: 4 (lower is better)
Translates to: HKPSLPQECPALKAVGWVGNPCS*KQLTFK
Trigger: CTTGAAAGTAAGTTGCTTCCATGAGCATGGATTACC...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTCAAGCTAAGTCCACCTaGGTGAATCCCAACTTGTCA +
Preference number: 4 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGQAKST*VNPNLS
Trigger: TGACAAGTTGGGATTCACCCAGGTGGACTTAGCTTG...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCGGACTGGATACTTATTaGGAGAAGAGGAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFGLDTY*EKRKPQ
Trigger: CTGGGGCTTCCTCTTCTCTCAATAAGTATCCAGTCC...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTACTGCTCAGTTGCAGTaGGCTGGCCTTTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: MALFAFPRRNASPVSCWTTAQLQ*AGLFGN
Trigger: GTTGCCAAAAAGGCCAGCTCACTGCAACTGAGCAGT...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTTCTTGGTTCGGACGATaGATTTCCTCTCCACGGCAC +
Preference number: 4 (lower is better)
Translates to: SLNEACSVLPVGICHHSRSWFGR*ISSPRH
Trigger: GTGCCGTGGAGAGGAAATTCATCGTCCGAACCAAGA...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCAGGACACACCATGTTTaGAGTGGGCAACGCACTGAA +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGRTHHV*SGQRTE
Trigger: TTCAGTGCGTTGCCCACTTCAAACATGGTGTGTCCT...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACGTCATGGAGTCTGGCTaGACTTGCAATAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNVMESG*TCNRRE
Trigger: TTCTCTTCTATTGCAAGTTCAGCCAGACTCCATGAC...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTCTCCAGAGGGTGGGATaGAGAGCCAGCAGTAACAAT +
Preference number: 4 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACLQRVG*RASSNN
Trigger: ATTGTTACTGCTGGCTCTTCATCCCACCCTCTGGAG...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTCTAAGTCCACCTGGGTaGATCCCAACTTGTCAAACT +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVLSPPG*IPTCQT
Trigger: AGTTTGACAAGTTGGGATTCACCCAGGTGGACTTAG...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp TCACTAGAAAAGGTGGGCAAGAGCTTCCTTAGCATCTCCAGAGGGTGGGATGAAGTGGGTACTTGCTGCTaGAGCTCAGGGATCTCATCA +
Preference number: 4 (lower is better)
Translates to: SLEKVGKSFLSISRGWDEVGTCC*SSGISS
Trigger: TGATGAGATCCCTGAGCTGCAGCAGCAAGTACCCAC...TTCATCCCACCCTCTGGAGATGCTAAGGAAGCTCTTGCCCACCTTTTCTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACCGGATACTGCTCAGTTaGAGTGAGCTGGCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: QDSLNEACSVLPVGICHHRILLS*SELAFL
Trigger: CAAAAAGGCCAGCTCACTGCAACTGAGCAGTATCCG...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCAGTCTGAATGAGGCTTaGTCAGTTTTACCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFSLNEA*SVLPVG
Trigger: GCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGTCAGTGTCTTTCCCCTaGCTGCCATGTGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQSVSFP*LPCALL
Trigger: CAGCAAAGCACATGGCAGGCAGGGGAAAGACACTGA...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACGCATCCCCAGTCAGCTaGTGGACTGGAATAAATGGA +
Preference number: 4 (lower is better)
Translates to: QDSLNEACSVLPVGICHHASPVS*WTGING
Trigger: TCCATTTATTCCAGTCCAGCAGCTGACTGGGGATGC...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTGCAACTCATAGGGAATaGCTGGAGGCGGAGATGGTA +
Preference number: 4 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLATHRE*LEAEMV
Trigger: TACCATCTCCGCCTCCAGCCATTCCCTATGAGTTGC...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTTGGTTTTTGGCTGCTTaGCAACTCATAGGGAATGGC +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVWFLAA*QLIGNG
Trigger: GCCATTCCCTATGAGTTGCCAAGCAGCCAAAAACCA...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCGGCTACTTCCAAAGATaGGGTCAACGGCCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGGYFQR*GQRPVS
Trigger: AGAAACAGGCCGTTGACCCCATCTTTGGAAGTAGCC...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTTTCCAATCAAAGGAATaGCTGACCAAACCAGGATGG +
Preference number: 4 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGFQSKE*LTKPGW
Trigger: CCATCCTGGTTTGGTCAGCCATTCCTTTGATTGGAA...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACTATGTGCTCAAGTCCTaGTGGGAAGTGAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNYVLKS*WEVKFL
Trigger: CAGGAATTTCACTTCCCACCAGGACTTGAGCACATA...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTGTAGGTGTGATTTTATaGGAGGCTCTTCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: MALFAFPRRNASPVSCWTVGVIL*EALPPA
Trigger: GGCTGGGGGAAGAGCCTCCCATAAAATCACACCTAC...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGCTCAAAGTGTGGCACTaGGTAAGCCCTCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQLKVWH*VSPQWP
Trigger: TGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAG...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTAGCATCTCCAGAGGGTaGGATGAAGAGCCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SLNEACSVLPVGICHHSRSISRG*DEEPAV
Trigger: TACTGCTGGCTCTTCATCCCACCCTCTGGAGATGCT...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGTGCCTTGAAGGCTGTTaGCTGGGTCCCCAGATATTC +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQCLEGC*LGPQIF
Trigger: GAATATCTGGGGACCCAGCCAACAGCCTTCAAGGCA...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTGTTGGTTCTGGTTTCTaGATGAGAGTCAATAGGCTC +
Preference number: 4 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGVGSGF*MRVNRL
Trigger: GAGCCTATTGACTCTCATCCAGAAACCAGAACCAAC...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTGGGAATGTTCCTGCTaGTCAGTGTCTTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACWECSC*SVSFPC
Trigger: GCAGGGGAAAGACACTGACCAGCAGGAACATTCCCA...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGTCAACTGCTGTGCTaGCAACAGTGCTACACTCAG +
Preference number: 4 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQCQLLC*QQCYTQ
Trigger: CTGAGTGTAGCACTGTTGTCAGCACAGCAGTTGACA...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTCTTGCAGAGATTTGGTaGGGTCAGAAAATCGCCTCC +
Preference number: 4 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACLAEIW*GQKIAS
Trigger: GGAGGCGATTTTCTGACCTCACCAAATCTCTGCAAG...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTACCATGCAGCTTATCTaGGCACAGGATGCGCTTGTT +
Preference number: 4 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLTMQLI*AQDALV
Trigger: AACAAGCGCATCCTGTGCTCAGATAAGCTGCATGGT...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAACTCGTGCATTTCCTTaGTGGGAATGTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQTRAFP*WECSCW
Trigger: CCAGCAGGAACATTCCCATCAAGGAAATGCACGAGT...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAATGAGGCTGTCAACTaGTGTGCTGACAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: QDSLNEACSVLPVGICHHNEAVN*CADNSA
Trigger: AGCACTGTTGTCAGCACAGCAGTTGACAGCCTCATT...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp TCACTAGAAAAGGTGGGCAAGAGCTTCCTTAGCATCTCCAGAGGGTGGGATGAACCTCCATTGTTTCAATaGTGCAGTGTCGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLEKVGKSFLSISRGWDEPPLFQ*CSVGRR
Trigger: CCTCCTACCGACACTGCAGCATTGAAACAATGGAGG...TTCATCCCACCCTCTGGAGATGCTAAGGAAGCTCTTGCCCACCTTTTCTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAACAGGATGCGCTTGTTaGTGGGGTAGCCACATGTAT +
Preference number: 4 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQTGCAC*WGSHMY
Trigger: ATACATGTGGCTACCCCAGCAACAAGCGCATCCTGT...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTAGTTCCTCGAATGCCTaGTTTTGTAATGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVSSSNA*FCNAGG
Trigger: TCCACCTGCATTACAAAAGCAGGCATTCGAGGAACT...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTTGCCATGTGCTTTGCTaGCGTGGTGGTTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLCHVLC*RGGCLL
Trigger: AAGCAAACAACCACCACGGCAGCAAAGCACATGGCA...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTCTTCACTTGTCTTCATaGTGCCCGTCTCGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLLHLSS*CPSRLG
Trigger: ACCAAGACGAGACGGGCACCATGAAGACAAGTGAAG...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTGGTTCTTGGTCCGATaGTTCCTCCAGATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACWFLVR*FLQISS
Trigger: GCTGGAAATCTGGAGGAACCATCGGACCAAGAACCA...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGTCTGTTGGCCGGAAATaGCGTACAAACCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQSVGRK*RTNLWP
Trigger: AGGCCAAAGGTTTGTACGCCATTTCCGGCCAACAGA...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTGGCTTTTCTCGGTTTTaGAAGAATTCAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVGFSRF*KNSAHR
Trigger: TCTGTGGGCTGAATTCTTCCAAAACCGAGAAAAGCC...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTCTTCTTCTGAGCAAATaGCAGTGGTGCCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: MALFAFPRRNASPVSCWTLLLSK*QWCPSP
Trigger: TGGAGATGGGCACCACTGCCATTTGCTCAGAAGAAG...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTCCAGCAGTAACAATGTaGGATCCTCACTTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SLNEACSVLPVGICHHSRPAVTM*DPHFGV
Trigger: GACCCCAAAGTGAGGATCCCACATTGTTACTGCTGG...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGTTTATATGGGAGCTCTaGGGTGACTCTGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQFIWEL*GDSGST
Trigger: TGTGGACCCAGAGTCACCCCAGAGCTCCCATATAAA...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGGCTCAGTTTTACCCGTaGGCATTTGTCACCACAGTC +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQAQFYP*AFVTTV
Trigger: GACTGTGGTGACAAATGCCCACGGGTAAAACTGAGC...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACTATATGTCCAGAATCTaGCCACCTCTCATGACATCT +
Preference number: 4 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNYMSRI*PPLMTS
Trigger: AGATGTCATGAGAGGTGGCCAGATTCTGGACATATA...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTGCTTTGCTGCCGTGGTaGTTGTTTGCTTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVALLPW*LFACLF
Trigger: AAACAAACAAGCAAACAACCACCACGGCAGCAAAGC...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGTCCCCAGTCAGCTGCTaGACTGGAATAAATGGAGGG +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLSPVSC*TGINGG
Trigger: CCCTCCATTTATTCCAGTCCAGCAGCTGACTGGGGA...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 72 bp AAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTaGGTTGGTTCTGGTTTCTGGATGAGAGTCAATAGG +
Preference number: 4 (lower is better)
Translates to: KRPQAFPVIWWG*VGSGFWMRVNR
Trigger: CCTATTGACTCTCATCCAGAAACCAGAACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAACCAGGTTCTTTCTGTTaGTGGAAGGAAGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQPGSFC*WKEGLD
Trigger: ATCCAGTCCTTCCTTCCATCAACAGAAAGAACCTGG...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGCAGGACAGTCTGAATaGGGCTTGCTCAGTTTTACC +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLAGQSE*GLLSFT
Trigger: GGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTGC...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAGGGATTCTGCACTCTTaGAGAGATTTGGTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQGILHS*RDLVRS
Trigger: TGACCTCACCAAATCTCTGCAAGAGTGCAGAATCCC...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAGGAACTCCTGATTCCTaGCTTCTCTCTGTATACCCA +
Preference number: 4 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQGTPDS*LLSVYP
Trigger: TGGGTATACAGAGAGAAGGCAGGAATCAGGAGTTCC...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGAAACACTCCCAACCATaGAGCTTATCTGAGCACAGG +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQKHSQP*SLSEHR
Trigger: CCTGTGCTCAGATAAGCTGCATGGTTGGGAGTGTTT...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTTCCTGTACTTTTAGGTaGTGGGCTCAAATTCTGTCT +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVSCTFR*WAQILS
Trigger: AGACAGAATTTGAGCCCAGCACCTAAAAGTACAGGA...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCAGACATAGAGTTATGTaGTCAAGTCCTGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGRHRVM*SSPGGK
Trigger: CTTCCCACCAGGACTTGAGCACATAACTCTATGTCT...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACATTAATTGGAATGAATaGCCCAAGGCTGCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNINWNE*PKAALS
Trigger: ACTAAGAGCAGCCTTGGGGCATTCATTCCAATTAAT...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGAGTGCTACACTCAGGTaGTGCTATATTCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLSATLR*CYIHRG
Trigger: GCCCCTGTGAATATAGCACCACCTGAGTGTAGCACT...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCTGGCGTACAAACCTTTaGCCTGTTGGTGATCTAACA +
Preference number: 4 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFWRTNL*PVGDLT
Trigger: TGTTAGATCACCAACAGGCCAAAGGTTTGTACGCCA...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCCAGACAGGAAAGCATTaGCTTCGAGAGAATCACAGT +
Preference number: 4 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFQTGKH*LRENHS
Trigger: ACTGTGATTCTCTCGAAGCCAATGCTTTCCTGTCTG...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCCCACCTGCCATCTGTTaGTGCAAATTTTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFPPAIC*CKFSGF
Trigger: GAATCCAGAAAATTTGCACCAACAGATGGCAGGTGG...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTTGTGCTTTGCTGCCGTaGTGGTTGTTTGCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: MALFAFPRRNASPVSCWTCALLP*WLFACL
Trigger: CAAACAAGCAAACAACCACCACGGCAGCAAAGCACA...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGCTGGACTGGAATAAATaGAGGGAAGGGTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQLDWNK*REGWQE
Trigger: TTCTTGCCACCCTTCCCTCCATTTATTCCAGTCCAG...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 72 bp GGAGAAGTCATGATCACTGCTGTTTCAGGAACAACCTaGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GEVMITAVSGTT*VTCQLRWWWRE
Trigger: TTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCTGAAACAGCAGTGATCATGACTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 72 bp GTGTTGGTAACTGAGTCACCAAAAGTCTGTTCTCCTTaGATTGCTAACTCCTCCGAAGCGACCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VLVTESPKVCSP*IANSSEATSGL
Trigger: AAGGCCTGAGGTCGCTTCGGAGGAGTTAGCAATCAAAGGAGAACAGACTTTTGGTGACTCAGTTACCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACAGTTTGGCTGCCAAATaGGGCTGTCAACTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHSLAAK*GCQLLC
Trigger: GCACAGCAGTTGACAGCCTCATTTGGCAGCCAAACT...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCACCTTTGGCCTGTTGGTaGTCTAACAGCAAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KGLLPKMGSTACFFKILAPLACW*SNSKQQ
Trigger: TTGCTGCTTGCTGTTAGATCACCAACAGGCCAAAGG...TGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGAAGTGGGCAACGCACTaGAACTGGGGAATAAAACAA +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQKWATH*NWGIKQ
Trigger: TTGTTTTATTCCCCAGTTTCAGTGCGTTGCCCACTT...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp TCACTAGAAAAGGTGGGCAAGAGCTTCCTTAGCATCTCCAGAGGGTGGGATGAACCCTACTCTGAAGGATaGTTTGGCCATAAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: SLEKVGKSFLSISRGWDEPYSEG*FGHKRD
Trigger: ATCCCTTTTATGGCCAAATCATCCTTCAGAGTAGGG...TTCATCCCACCCTCTGGAGATGCTAAGGAAGCTCTTGCCCACCTTTTCTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTGATGCACTTCTCCACTaGCTCAGTTTCACACAAGTT +
Preference number: 4 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLDALLH*LSFTQV
Trigger: AACTTGTGTGAAACTGAGTCAGTGGAGAAGTGCATC...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTAAGTCTGTTCTCCTTTaGTTGCTAACTCCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACKSVLL*LLTPPK
Trigger: CTTCGGAGGAGTTAGCAATCAAAGGAGAACAGACTT...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCTTGTGTGTTGGTAACTaGGTCACCAAAAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGLCVGN*VTKSLF
Trigger: GAACAGACTTTTGGTGACTCAGTTACCAACACACAA...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGTTTGGAGATTTGGGTaGACAGGCTCCTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLVWRFG*TGSWFL
Trigger: CAAAAACCAGGAGCCTGTGCACCCAAATCTCCAAAC...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACAAAGAGCCCGGATACTaGTCAGTTGCAGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHKEPGY*SVAVSW
Trigger: CCAGCTCACTGCAACTGAGCAGTATCCGGGCTCTTT...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGACTTGTGGGGGATTCTaGACTCTTGCAGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLTCGGF*TLAEIW
Trigger: CCAAATCTCTGCAAGAGTGCAGAATCCCCCACAAGT...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACTTTGGGGGAACAACATaGACAGAATGTCTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: QDSLNEACSVLPVGICHHFGGTT*TECLSV
Trigger: AACACTCAGACATTCTGTGCATGTTGTTCCCCCAAA...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACTATCTGAGCACAGGATaGGCTTGTTGCTGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHYLSTG*ACCWGS
Trigger: GCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATA...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACGATTTAGTTTGTTCTTaGCAATCCCCAAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNDLVCS*QSPKSE
Trigger: CTCTGATTTTGGGGATTGGCAAGAACAAACTAAATC...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTTTTACTGTGGGGTGTTaGCTTAATGGACTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: THACLKVWHWVSPQWPSVFTVGC*LNGLRK
Trigger: TTTTCTCAGTCCATTAAGGCAACACCCCACAGTAAA...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTCGGCCACAGCAACAATaGTTTGCAAATCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: MALFAFPRRNASPVSCWTRPQQQ*FANHLL
Trigger: CAACAGATGATTTGCAAACCATTGTTGCTGTGGCCG...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTTTAAAAAGTAGCTACTaGGTAATCCATGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGLKSSY*VIHAHG
Trigger: TCCATGAGCATGGATTACCCAGTAGCTACTTTTTAA...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCTGTACTTTTAGGTGCTaGGCTCAAATTCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFCTFRC*AQILSA
Trigger: AGCAGACAGAATTTGAGCCCAGCACCTAAAAGTACA...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCTTGAGAGTCCAATGGTaGGTTCATGTTTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGLRVQW*VHVFLP
Trigger: TGGCAAGAAAACATGAACCCACCATTGGACTCTCAA...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCGAGTTGAGAGTCCAATaGTGGGTTCATGTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGELRVQ*WVHVFL
Trigger: CAAGAAAACATGAACCCACCATTGGACTCTCAACTC...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGATGGTGGGGTTTGGTTaGTTCTGGTTTCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLMVGFG*FWFLDE
Trigger: CTCATCCAGAAACCAGAACCAACCAAACCCCACCAT...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGCCTTCCCTGTTATATaGTGGGGTTTGGTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLAFPVI*WGLVGS
Trigger: AGAACCAACCAAACCCCACCATATAACAGGGAAGGC...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGAAATCCCTAAGAAACTaGCCATGCATGGTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLKSLRN*PCMVKG
Trigger: GCCCTTTACCATGCATGGTCAGTTTCTTAGGGATTT...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTCGGCAGGTAAGAGCATaGACAAAAGCAAAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: MALFAFPRRNASPVSCWTRQVRA*TKAKFS
Trigger: ACTAAACTTTGCTTTTGTTCATGCTCTTACCTGCCG...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCTTGGGCCTTATCATGTaGATATTTAGTGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFLGLIM*IFSEFG
Trigger: GCCAAACTCACTAAATATGCACATGATAAGGCCCAA...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCACACTTGTCTTCATGGTaGCCGTCTCGTCTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: KGLLPKMGSTACFFKILAHLSSW*PSRLGK
Trigger: TTTACCAAGACGAGACGGGCACCATGAAGACAAGTG...TGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTCTACTGGGTAATCCATaGTCATGGAAGCAACTTACT +
Preference number: 4 (lower is better)
Translates to: SLNEACSVLPVGICHHSRLLGNP*SWKQLT
Trigger: AGTAAGTTGCTTCCATGAGCATGGATTACCCAGTAG...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTGTCCAAAAACACTCGTaGATTTCCTTGATGGGAATG +
Preference number: 4 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLVQKHS*ISLMGM
Trigger: CATTCCCATCAAGGAAATGCACGAGTGTTTTTGGAC...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCATCATCAGAAGCTCCCTaGTTTGGAGATTTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: KGLLPKMGSTACFFKILASSEAP*FGDLGA
Trigger: TGCACCCAAATCTCCAAACCAGGGAGCTTCTGATGA...TGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGCCAGATTTCCAGCCCTaGAAGAGCCCTGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQPDFQP*KSPVSW
Trigger: CCAAGAAACAGGGCTCTTCCAGGGCTGGAAATCTGG...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTAAGGACCCAAAACTCTaGAAAGGAGAAGTCATGATC +
Preference number: 4 (lower is better)
Translates to: MALFAFPRRNASPVSCWTKDPKL*KGEVMI
Trigger: GATCATGACTTCTCCTTTCCAGAGTTTTGGGTCCTT...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGTATTCTAGAATGATCTaGGCAGTGTGGGATGCAGTT +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQYSRMI*AVWDAV
Trigger: AACTGCATCCCACACTGCCCAGATCATTCTAGAATA...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTTTATATGGTGGGGTTTaGTTGGTTCTGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLNEACSVLPVGICHHSRLYGGV*LVLVSG
Trigger: TCCAGAAACCAGAACCAACCAAACCCCACCATATAA...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGTTCCCTGTTATATGGTaGGGTTTGGTTGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLFPVIW*GLVGSG
Trigger: ACCAGAACCAACCAAACCCCACCATATAACAGGGAA...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 72 bp GCAAAAGAAATCAGACTGCACTGGCTTTTCTCGGTTTaGGAAGAATTCAGCCCACAGAGTAGCTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AKEIRLHWLFSV*EEFSPQSSSQK
Trigger: CTTCTGGGAGCTACTCTGTGGGCTGAATTCTTCCAAAACCGAGAAAAGCCAGTGCAGTCTGATTTCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 72 bp GAACATTGGCAAACTGTCCACATCAGCACTTCGAAGTaGGAAACACAAGACCCCATGGTCTTCAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EHWQTVHISTSK*ETQDPMVFKAA
Trigger: AGCTGCTTTGAAGACCATGGGGTCTTGTGTTTCCAACTTCGAAGTGCTGATGTGGACAGTTTGCCAATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 72 bp TTTCTTGCCAACACTTTCTTTTCAGGACACCCATGCTaGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATG +
Preference number: 4 (lower is better)
Translates to: FLANTFFSGHPC*SQSVALGKPSM
Trigger: CATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGAAAGTGTTGGCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGTGCTTCTGGAACTCCTaGTTCCTGCCTTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQCFWNS*FLPSLC
Trigger: ACAGAGAGAAGGCAGGAATCAGGAGTTCCAGAAGCA...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGAATCAAAGGAATGGCTaGCCAAACCAGGATGGTATT +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLNQRNG*PNQDGI
Trigger: AATACCATCCTGGTTTGGTCAGCCATTCCTTTGATT...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGTTTAGTGAGTTTGGCTaGCAAATGAGGCTGTCAACT +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLFSEFG*QMRLST
Trigger: AGTTGACAGCCTCATTTGGCAGCCAAACTCACTAAA...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTAGAAGTCATGATCACTaGTGTTTCAGGAACAACCTT +
Preference number: 4 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACRSHDH*CFRNNL
Trigger: AAGGTTGTTCCTGAAACAGCAGTGATCATGACTTCT...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGCGCAAGAAACACAAATaGCAGTTAGATAGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQRKKHK*QLDSSY
Trigger: GTAGGAACTATCTAACTGGCATTTGTGTTTCTTGCG...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCATTTTCAGGACACCCATaGTTGTCTCAAAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: KGLLPKMGSTACFFKILAFSGHP*LSQSVA
Trigger: TGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAA...TGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGAATGATGGCTTTGTTTaGCTTCCCAAGAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQNDGFV*LPKKKC
Trigger: GCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGCTCATAGGGAATGGCTaGAGGCGGAGATGGTATATG +
Preference number: 4 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQLIGNG*RRRWYM
Trigger: CATATACCATCTCCGCCTCCAGCCATTCCCTATGAG...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGGGATGCGCTTGTTGCTaGGGTAGCCACATGTATATG +
Preference number: 4 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQGCACC*GSHMYM
Trigger: CATATACATGTGGCTACCCCAGCAACAAGCGCATCC...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCACAAGTCCCAGGTGGGTaGGATTTTATTCTTACCACA +
Preference number: 4 (lower is better)
Translates to: KGLLPKMGSTACFFKILAQVPGG*DFILTT
Trigger: TGTGGTAAGAATAAAATCCCACCCACCTGGGACTTG...TGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAACTTTTAACTTTACTGTaGGGTGTTGCCTTAATGGAC +
Preference number: 4 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQLLTLL*GVALMD
Trigger: GTCCATTAAGGCAACACCCCACAGTAAAGTTAAAAG...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 72 bp TCTGTACACTTTGTCCAAAAACACTCGTGCATTTCCTaGATGGGAATGTTCCTGCTGGTCAGTGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SVHFVQKHSCIS*MGMFLLVSVFP
Trigger: GGGAAAGACACTGACCAGCAGGAACATTCCCATCAAGGAAATGCACGAGTGTTTTTGGACAAAGTGTACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACCCATTGTTTCAATGCTaGAGTGTCGGTAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHPLFQC*SVGRRF
Trigger: AAACCTCCTACCGACACTGCAGCATTGAAACAATGG...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGGTGGGATCCTCACTTTaGGGTCCTTTGCAGATAAAG +
Preference number: 4 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQVGSSL*GPLQIK
Trigger: CTTTATCTGCAAAGGACCCCAAAGTGAGGATCCCAC...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACAAATTCTGTCTGCTGTaGTCATTAACGGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHKFCLL*SLTGRG
Trigger: ACCTCTTCCCGTTAATGACCACAGCAGACAGAATTT...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTTTTAAGGTTATTAATTaGAATGAATGCCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLFKVIN*NECPKA
Trigger: AGCCTTGGGGCATTCATTCCAATTAATAACCTTAAA...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 72 bp TTTGAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTaGCCAACACTTTCTTTTCAGGACACCCATGCTTGT +
Preference number: 4 (lower is better)
Translates to: FELRVQWWVHVF*PTLSFQDTHAC
Trigger: ACAAGCATGGGTGTCCTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACTGTGTTATAACCACCTaGCATCTGTTGGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHCVITT*HLLVQI
Trigger: AATTTGCACCAACAGATGGCAGGTGGTTATAACACA...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGATAGTTCCTACACTGTaGTTATTTACCAGACTAGAA +
Preference number: 4 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLIVPTL*LFTRLE
Trigger: TTCTAGTCTGGTAAATAACCACAGTGTAGGAACTAT...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGGAAATCAGACTGCACTaGCTTTTCTCGGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQEIRLH*LFSVLE
Trigger: TTCCAAAACCGAGAAAAGCCAGTGCAGTCTGATTTC...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR TCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGGAGTCAATAGGCTCGTaGACTTTTAACTTTACTGTG +
Preference number: 4 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQESIGS*TFNFTV
Trigger: CACAGTAAAGTTAAAAGTTCACGAGCCTATTGACTC...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGCATTCTTCCCTTAGATaGCACCTCACACAAATAGTA +
Preference number: 4 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQHSSLR*HLTQIV
Trigger: TACTATTTGTGTGAGGTGGCATCTAAGGGAAGAATG...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGCAAAAGAAATCAGACTaGACTGGCTTTTCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQQKKSD*TGFSRF
Trigger: AAACCGAGAAAAGCCAGTGCAGTCTGATTTCTTTTG...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR GCA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGATATTTCTATGCTTATaGCTTCCACTTTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQIFLCL*LPLFPN
Trigger: GTTGGGAAAAAGTGGAAGGCATAAGCATAGAAATAT...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375099.4
3UTR CAA 72 bp CTGCTGTTCCTTCTGCTGCCAAGACTAATTTACCTATaGGACTTTATGAGGGAATATACTAGAGTAACCTAT +
Preference number: 4 (lower is better)
Translates to: LLFLLLPRLIYL*DFMREYTRVTY
Trigger: ATAGGTTACTCTAGTATATTCCCTCATAAAGTCCAATAGGTAAATTAGTCTTGGCAGCAGAAGGAACAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp CACAAGCCATCTCTTCCGCAGGAGTGCCCTGCCTTGAAGGCTGTTGGCTGGGTCAGTGTGCTAGGCCGGTaGAGCCCATTTAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: HKPSLPQECPALKAVGWVSVLGR*SPFRTG
Trigger: CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACT...GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTGCGGAAGAGATGGCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS TCA 90 bp GCCCGTCTCGTCTTGGTAAAGAGCCCGGATACTGCTCAGTTGCAGTaGGCTGGCCTTTTTGGCAACGGTTTCCACAGCCTCCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: ARLVLVKSPDTAQLQ*AGLFGNGFHSLLLQ
Trigger: CTGGAGGAGGAGGCTGTGGAAACCGTTGCCAAAAAGGCCAGCTCACTGCAACTGAGCAGTATCCGGGCTCTTTACCAAGACGAGACGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGTGCCTGCCATGTGCTTaGCTGCCGTGGTGGTTGTTT +
Preference number: 5 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGCLPCA*LPWWLF
Trigger: AAACAACCACCACGGCAGCAAAGCACATGGCAGGCA...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp CAACAGTGCTACACTCAGGTGGTGCTATATTCACAGGGGCTTCTGTaGCCATTGCTTCTCAAGACCCCTAGCCGTTCCGCTCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: QQCYTQVVLYSQGLL*PLLLKTPSRSAPSA
Trigger: GGCGGATGGAGCGGAACGGCTAGGGGTCTTGAGAAGCAATGGCCACAGAAGCCCCTGTGAATATAGCACCACCTGAGTGTAGCACTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp ACAGGCTCCTGGTTTTTGGCTGCTTGGCAACTCATAGGGAATGGCTaGAGGCGGAGATGGTATATGATGAGCGCACACCTCCACGCCCTG +
Preference number: 5 (lower is better)
Translates to: TGSWFLAAWQLIGNG*RRRWYMMSAHLHAL
Trigger: CAGGGCGTGGAGGTGTGCGCTCATCATATACCATCTCCGCCTCCAGCCATTCCCTATGAGTTGCCAAGCAGCCAAAAACCAGGAGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp GTGCACAGGCTCCTGGTTTTTGGCTGCTTGGCAACTCATAGGGAATaGCTGGAGGCGGAGATGGTATATGATGAGCGCACACCTCCACGC +
Preference number: 5 (lower is better)
Translates to: VHRLLVFGCLATHRE*LEAEMVYDERTPPR
Trigger: GCGTGGAGGTGTGCGCTCATCATATACCATCTCCGCCTCCAGCCATTCCCTATGAGTTGCCAAGCAGCCAAAAACCAGGAGCCTGTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 90 bp TCCAGTGAGATGCCCAGCACAGACTTGTGGGGGATTCTGCACTCTTaGAGAGATTTGGTGAGGTCAGAAAATCGCCTCCTGGGCACCTCC +
Preference number: 5 (lower is better)
Translates to: SSEMPSTDLWGILHS*RDLVRSENRLLGTS
Trigger: GGAGGTGCCCAGGAGGCGATTTTCTGACCTCACCAAATCTCTGCAAGAGTGCAGAATCCCCCACAAGTCTGTGCTGGGCATCTCACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp CTCATCAGAAGCTCCCTGGTTTGGAGATTTGGGTGCACAGGCTCCTaGTTTTTGGCTGCTTGGCAACTCATAGGGAATGGCTGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LIRSSLVWRFGCTGS*FLAAWQLIGNGWRR
Trigger: CCGCCTCCAGCCATTCCCTATGAGTTGCCAAGCAGCCAAAAACCAGGAGCCTGTGCACCCAAATCTCCAAACCAGGGAGCTTCTGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACGGTCTTGTCCGTCCCTaGGCGGACTTGGGCCTTATC +
Preference number: 5 (lower is better)
Translates to: QDSLNEACSVLPVGICHHGLVRP*ADLGLI
Trigger: GATAAGGCCCAAGTCCGCCAAGGGACGGACAAGACC...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp ATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGGACTCAGGAGTGCCCTGCCTaGAAGGCTGTTGGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: MALFAFPRRNASPVSCWTQECPA*KAVGWV
Trigger: GACCCAGCCAACAGCCTTCAAGGCAGGGCACTCCTG...AGTCCAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp CCTCCACGCCCTGGGATTTCTGCAGACTCGGTCTTGTCCGTCCCTTaGCGGACTTGGGCCTTATCATGTGCATATTTAGTGAGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: PPRPGISADSVLSVP*RTWALSCAYLVSLA
Trigger: AGCCAAACTCACTAAATATGCACATGATAAGGCCCAAGTCCGCCAAGGGACGGACAAGACCGAGTCTGCAGAAATCCCAGGGCGTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp TTTTTGGCTGCTTGGCAACTCATAGGGAATGGCTGGAGGCGGAGATaGTATATGATGAGCGCACACCTCCACGCCCTGGGATTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: FLAAWQLIGNGWRRR*YMMSAHLHALGFLQ
Trigger: CTGCAGAAATCCCAGGGCGTGGAGGTGTGCGCTCATCATATACCATCTCCGCCTCCAGCCATTCCCTATGAGTTGCCAAGCAGCCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp GCTGCAGCTCAGGGATCTCATCAGAAGCTCCCTGGTTTGGAGATTTaGGTGCACAGGCTCCTGGTTTTTGGCTGCTTGGCAACTCATAGG +
Preference number: 5 (lower is better)
Translates to: AAAQGSHQKLPGLEI*VHRLLVFGCLATHR
Trigger: CCTATGAGTTGCCAAGCAGCCAAAAACCAGGAGCCTGTGCACCCAAATCTCCAAACCAGGGAGCTTCTGATGAGATCCCTGAGCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp TCTCGTCTTGGTAAAGAGCCCGGATACTGCTCAGTTGCAGTGAGCTaGCCTTTTTGGCAACGGTTTCCACAGCCTCCTCCTCCAGGTTCT +
Preference number: 5 (lower is better)
Translates to: SRLGKEPGYCSVAVS*PFWQRFPQPPPPGS
Trigger: AGAACCTGGAGGAGGAGGCTGTGGAAACCGTTGCCAAAAAGGCCAGCTCACTGCAACTGAGCAGTATCCGGGCTCTTTACCAAGACGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp CCCAAAGCCACCAAGAGGAGTGTGCTAGGCCGGTTGAGCCCATTTAGGACAGGGTGGAATCTTCTTCACTaGTCTTCATGGTGCCCGTCT +
Preference number: 5 (lower is better)
Translates to: PKATKRSVLGRLSPFRTGWNLLH*SSWCPS
Trigger: AGACGGGCACCATGAAGACAAGTGAAGAAGATTCCA...CCCTGTCCTAAATGGGCTCAACCGGCCTAGCACACTCCTCTTGGTGGCTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTGGGGATTCTGCACTCTaGCAGAGATTTGGTGAGGTC +
Preference number: 5 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGGDSAL*QRFGEV
Trigger: GACCTCACCAAATCTCTGCAAGAGTGCAGAATCCCC...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 90 bp TTGTCTTCATGGTGCCCGTCTCGTCTTGGTAAAGAGCCCGGATACTaGTCAGTTGCAGTGAGCTGGCCTTTTTGGCAACGGTTTCCACAG +
Preference number: 5 (lower is better)
Translates to: LSSWCPSRLGKEPGY*SVAVSWPFWQRFPQ
Trigger: CTGTGGAAACCGTTGCCAAAAAGGCCAGCTCACTGCAACTGAGCAGTATCCGGGCTCTTTACCAAGACGAGACGGGCACCATGAAGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 90 bp CGGCACAAGCTCGAGCTCTGGAATCTTCTTCACTTGTCTTCATGGTaGCCGTCTCGTCTTGGTAAAGAGCCCGGATACTGCTCAGTTGCA +
Preference number: 5 (lower is better)
Translates to: RHKLELWNLLHLSSW*PSRLGKEPGYCSVA
Trigger: TGCAACTGAGCAGTATCCGGGCTCTTTACCAAGACGAGACGGGCACCATGAAGACAAGTGAAGAAGATTCCAGAGCTCGAGCTTGTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp CCACGGCACAAGCTCGAGCTCTGGAATCTTCTTCACTTGTCTTCATaGTGCCCGTCTCGTCTTGGTAAAGAGCCCGGATACTGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: PRHKLELWNLLHLSS*CPSRLGKEPGYCSV
Trigger: AACTGAGCAGTATCCGGGCTCTTTACCAAGACGAGACGGGCACCATGAAGACAAGTGAAGAAGATTCCAGAGCTCGAGCTTGTGCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp CTTTGGCCTGTTGGTGATCTAACAGCAAGCAGCAACCTTGGTTCTTaGTCCGATGGTTCCTCCAGATTTCCAGCCCTGGAAGAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: LWPVGDLTASSNLGS*SDGSSRFPALEEPC
Trigger: ACAGGGCTCTTCCAGGGCTGGAAATCTGGAGGAACCATCGGACCAAGAACCAAGGTTGCTGCTTGCTGTTAGATCACCAACAGGCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp CAGGACAGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACCGTCCCTTGGCGGACTaGGGCCTTATCATGTGCATA +
Preference number: 5 (lower is better)
Translates to: QDSLNEACSVLPVGICHHRPLAD*GLIMCI
Trigger: TATGCACATGATAAGGCCCAAGTCCGCCAAGGGACG...GTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACTGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTCCCTGGTTTGGAGATTaGGGTGCACAGGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACPWFGD*GAQAPG
Trigger: ACCAGGAGCCTGTGCACCCAAATCTCCAAACCAGGG...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTGGTGCCCGTCTCGTCTaGGTAAAGAGCCCGGATACT +
Preference number: 5 (lower is better)
Translates to: SLNEACSVLPVGICHHSRGARLV*VKSPDT
Trigger: AGTATCCGGGCTCTTTACCAAGACGAGACGGGCACC...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTTCAGGACACCCATGCTaGTCTCAAAGTGTGGCACTG +
Preference number: 5 (lower is better)
Translates to: THACLKVWHWVSPQWPSVSGHPC*SQSVAL
Trigger: CAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGA...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTTCCACGTTGGCGATATaGGTCAAGCTAAGTCCACCT +
Preference number: 5 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGSTLAI*VKLSPP
Trigger: AGGTGGACTTAGCTTGACCAATATCGCCAACGTGGA...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS TCA 90 bp CCAGATTTCCAGCCCTGGAAGAGCCCTGTTTCTTGGTTCGGACGATaGATTTCCTCTCCACGGCACAAGCTCGAGCTCTGGAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: PDFQPWKSPVSWFGR*ISSPRHKLELWNLL
Trigger: AAGAAGATTCCAGAGCTCGAGCTTGTGCCGTGGAGAGGAAATTCATCGTCCGAACCAAGAAACAGGGCTCTTCCAGGGCTGGAAATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS TCA 90 bp CCAGCACAGACTTGTGGGGGATTCTGCACTCTTGCAGAGATTTGGTaGGGTCAGAAAATCGCCTCCTGGGCACCTCCATTGTTTCAATGC +
Preference number: 5 (lower is better)
Translates to: PAQTCGGFCTLAEIW*GQKIASWAPPLFQC
Trigger: GCATTGAAACAATGGAGGTGCCCAGGAGGCGATTTTCTGACCTCACCAAATCTCTGCAAGAGTGCAGAATCCCCCACAAGTCTGTGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 90 bp CAGCTCAGGGATCTCATCAGAAGCTCCCTGGTTTGGAGATTTGGGTaGACAGGCTCCTGGTTTTTGGCTGCTTGGCAACTCATAGGGAAT +
Preference number: 5 (lower is better)
Translates to: QLRDLIRSSLVWRFG*TGSWFLAAWQLIGN
Trigger: ATTCCCTATGAGTTGCCAAGCAGCCAAAAACCAGGAGCCTGTGCACCCAAATCTCCAAACCAGGGAGCTTCTGATGAGATCCCTGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp AGTCTGAATGAGGCTTGCTCAGTTTTACCCGTGGGCATTTGTCACCACAGTCGTAGTGAGCTGGCCTTTTaGGCAACGGTTTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: SLNEACSVLPVGICHHSRSELAF*ATVSTA
Trigger: GGCTGTGGAAACCGTTGCCAAAAAGGCCAGCTCACT...ACGACTGTGGTGACAAATGCCCACGGGTAAAACTGAGCAAGCCTCATTCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp AGGAACAACCTTGGTAACTTGCCAGTTACGCTGGTGGTGGAGAGAATGGAACAGCAGCAACCTTGGTTCTaGGTCCGATGGTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: RNNLGNLPVTLVVERMEQQQPWF*VRWFLQ
Trigger: CTGGAGGAACCATCGGACCAAGAACCAAGGTTGCTG...CTGTTCCATTCTCTCCACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTTCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCCAGCAAGCAGCAACCTaGGTTCTTGGTCCGATGGTT +
Preference number: 5 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGQQAAT*VLGPMV
Trigger: AACCATCGGACCAAGAACCAAGGTTGCTGCTTGCTG...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACCACTCTTGCAGAGATTaGGTGAGGTCAGAAAATCGC +
Preference number: 5 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNHSCRD*VRSENR
Trigger: GCGATTTTCTGACCTCACCAAATCTCTGCAAGAGTG...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 90 bp AGACTCGGTCTTGTCCGTCCCTTGGCGGACTTGGGCCTTATCATGTaGATATTTAGTGAGTTTGGCTGCCAAATGAGGCTGTCAACTGCT +
Preference number: 5 (lower is better)
Translates to: RLGLVRPLADLGLIM*IFSEFGCQMRLSTA
Trigger: AGCAGTTGACAGCCTCATTTGGCAGCCAAACTCACTAAATATGCACATGATAAGGCCCAAGTCCGCCAAGGGACGGACAAGACCGAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 90 bp GGATACTTATTGAGAGAAGAGGAAGCCCCAGTGGGTACTTGCTGCTaGAGCTCAGGGATCTCATCAGAAGCTCCCTGGTTTGGAGATTTG +
Preference number: 5 (lower is better)
Translates to: GYLLREEEAPVGTCC*SSGISSEAPWFGDL
Trigger: CAAATCTCCAAACCAGGGAGCTTCTGATGAGATCCCTGAGCTGCAGCAGCAAGTACCCACTGGGGCTTCCTCTTCTCTCAATAAGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 90 bp ACTGGATACTTATTGAGAGAAGAGGAAGCCCCAGTGGGTACTTGCTaGTGCAGCTCAGGGATCTCATCAGAAGCTCCCTGGTTTGGAGAT +
Preference number: 5 (lower is better)
Translates to: TGYLLREEEAPVGTC*CSSGISSEAPWFGD
Trigger: ATCTCCAAACCAGGGAGCTTCTGATGAGATCCCTGAGCTGCAGCAGCAAGTACCCACTGGGGCTTCCTCTTCTCTCAATAAGTATCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp CACAGCCTCCTCCTCCAGGTTCTTTCTGTTGATGGAAGGAAGGACTaGATACTTATTGAGAGAAGAGGAAGCCCCAGTGGGTACTTGCTG +
Preference number: 5 (lower is better)
Translates to: HSLLLQVLSVDGRKD*ILIERRGSPSGYLL
Trigger: CAGCAAGTACCCACTGGGGCTTCCTCTTCTCTCAATAAGTATCCAGTCCTTCCTTCCATCAACAGAAAGAACCTGGAGGAGGAGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACTCTGCAGACTCGGTCTaGTCCGTCCCTTGGCGGACT +
Preference number: 5 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHSADSV*SVPWRT
Trigger: AGTCCGCCAAGGGACGGACAAGACCGAGTCTGCAGA...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACAGCCCCAGTGGGTACTaGCTGCTGCAGCTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHSPSGY*LLQLRD
Trigger: ATCCCTGAGCTGCAGCAGCAAGTACCCACTGGGGCT...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATCCTGGGCACCTCCATaGTTTCAATGCTGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQSWAPP*FQCCSV
Trigger: GACACTGCAGCATTGAAACAATGGAGGTGCCCAGGA...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGATGCCCAGCACAGACTaGTGGGGGATTCTGCACTCT +
Preference number: 5 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLMPSTD*WGILHS
Trigger: AGAGTGCAGAATCCCCCACAAGTCTGTGCTGGGCAT...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATCCGGGGAGGAGGACTaGGTTCTAACAGTGGAACAA +
Preference number: 5 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQSGEED*VLTVEQ
Trigger: TTGTTCCACTGTTAGAACCAAGTCCTCCTCCCCGGA...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCAATACCTCCAGAGATTaGTGCTTCCGCGTCGACTGT +
Preference number: 5 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFNTSRD*CFRVDC
Trigger: ACAGTCGACGCGGAAGCACAAATCTCTGGAGGTATT...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS TCA 90 bp ATCATCTGTTGGCCGGAAATGGCGTACAAACCTTTGGCCTGTTGGTaGTCTAACAGCAAGCAGCAACCTTGGTTCTTGGTCCGATGGTTC +
Preference number: 5 (lower is better)
Translates to: IICWPEMAYKPLACW*SNSKQQPWFLVRWF
Trigger: GAACCATCGGACCAAGAACCAAGGTTGCTGCTTGCTGTTAGATCACCAACAGGCCAAAGGTTTGTACGCCATTTCCGGCCAACAGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp TCGGCCACAGCAACAATGGTTTGCAAATCATCTGTTGGCCGGAAATaGCGTACAAACCTTTGGCCTGTTGGTGATCTAACAGCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SATATMVCKSSVGRK*RTNLWPVGDLTASS
Trigger: GCTGCTTGCTGTTAGATCACCAACAGGCCAAAGGTTTGTACGCCATTTCCGGCCAACAGATGATTTGCAAACCATTGTTGCTGTGGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTAACAACCTTGGTAACTaGCCAGTTACGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLNNLGN*PVTLVV
Trigger: CACCACCAGCGTAACTGGCAAGTTACCAAGGTTGTT...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GAACCACCATCACCTCTCTCTGGTCACCTTCATACCTCCAGCACTCAAGTCTTCGTTTCAGGAACAACCTaGGTAACTTGCCAGTTACGC +
Preference number: 5 (lower is better)
Translates to: EPPSPLSGHLHTSSTQVFVSGTT*VTCQLR
Trigger: GCGTAACTGGCAAGTTACCAAGGTTGTTCCTGAAAC...GAAGACTTGAGTGCTGGAGGTATGAAGGTGACCAGAGAGAGGTGATGGTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTGTGATGACCATGCTTaGGGGGAACAACATGCACAG +
Preference number: 5 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACCDDHA*GEQHAQ
Trigger: CTGTGCATGTTGTTCCCCCAAAGCATGGTCATCACA...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp ACTCCTCCGAAGCGACCTCAGGCCTTCCCTGTTATATGGTGGGGTTTGGTTGGTCTAACTCCTTCAAGCTaGCTCCATTTCACTCAAGTT +
Preference number: 5 (lower is better)
Translates to: TPPKRPQAFPVIWWGLVGLTPSS*LHFTQV
Trigger: AACTTGAGTGAAATGGAGCAAGCTTGAAGGAGTTAG...ACCAACCAAACCCCACCATATAACAGGGAAGGCCTGAGGTCGCTTCGGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACAAAGTCTGTTCTCCTTaGATTGCTAACTCCTCCGAA +
Preference number: 5 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNKVCSP*IANSSE
Trigger: TTCGGAGGAGTTAGCAATCAAAGGAGAACAGACTTT...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTTTTACCCGTGGGCATTaGTCACCACAGTCGTTCAGT +
Preference number: 5 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLFTRGH*SPQSFS
Trigger: ACTGAACGACTGTGGTGACAAATGCCCACGGGTAAA...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAACACTCGTGCATTTCCTaGATGGGAATGTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQHSCIS*MGMFLL
Trigger: CAGCAGGAACATTCCCATCAAGGAAATGCACGAGTG...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 90 bp TTGGCGGACTTGGGCCTTATCATGTGCATATTTAGTGAGTTTGGCTaGCAAATGAGGCTGTCAACTGCTGTGCTGACAACAGTGCTACAC +
Preference number: 5 (lower is better)
Translates to: LADLGLIMCIFSEFG*QMRLSTAVLTTVLH
Trigger: GTGTAGCACTGTTGTCAGCACAGCAGTTGACAGCCTCATTTGGCAGCCAAACTCACTAAATATGCACATGATAAGGCCCAAGTCCGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGGGGCTTCTGTGGCCATaGCTTCTCAAGACCCCTAGC +
Preference number: 5 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQGLLWP*LLKTPS
Trigger: GCTAGGGGTCTTGAGAAGCAATGGCCACAGAAGCCC...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCTTTGCAAATCATCTGTaGGCCGGAAATGGCGTACAA +
Preference number: 5 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGFANHL*AGNGVQ
Trigger: TTGTACGCCATTTCCGGCCAACAGATGATTTGCAAA...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp TCACTAGAAAAGGTGGGCAAGAGCTTCCTTAGCATCTCCAGAGGGTGGGATGAATCAGGGCAAGATCTGTaGTGTTATAACCACCTGCCA +
Preference number: 5 (lower is better)
Translates to: SLEKVGKSFLSISRGWDESGQDL*CYNHLP
Trigger: TGGCAGGTGGTTATAACACAACAGATCTTGCCCTGA...TTCATCCCACCCTCTGGAGATGCTAAGGAAGCTCTTGCCCACCTTTTCTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAAGTTATATGGTGGGGTTaGGTTGGTTCTGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQVIWWG*VGSGFW
Trigger: CCAGAAACCAGAACCAACCAAACCCCACCATATAAC...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GCGGGAGCACACACCAGAACTCAGGACTTTGTGATGACCATGCTTTGGGGGAACTATGAGTGTTGTGTGTaGGTAACTGAGTCACCAAAA +
Preference number: 5 (lower is better)
Translates to: AGAHTRTQDFVMTMLWGNYECCV*VTESPK
Trigger: TTTTGGTGACTCAGTTACCAACACACAACACTCATA...GTTCCCCCAAAGCATGGTCATCACAAAGTCCTGAGTTCTGGTGTGTGCTCCCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp TCTTTTCAGGACACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAACCCAGAATGATGGCTTaGTTTGCCTTCCCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: SFQDTHACLKVWHWVSPQPRMMA*FAFPRR
Trigger: TCTTCTTGGGAAGGCAAACAAAGCCATCATTCTGGG...TTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGTGTCCTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp ATGGTTTGCAAATCATCTGTTGGCCGGAAATGGCGTACAAACCTTTaGCCTGTTGGTGATCTAACAGCAAGCAGCAACCTTGGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: MVCKSSVGRKWRTNL*PVGDLTASSNLGSW
Trigger: CCAAGAACCAAGGTTGCTGCTTGCTGTTAGATCACCAACAGGCCAAAGGTTTGTACGCCATTTCCGGCCAACAGATGATTTGCAAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp ACCCATGCTTGTCTCAAAGTGTGGCACTGGGTAAGCCCTCAATGGCCATCGGTTAATAAGCCAAGGAGGTaGTCAGTACAAACCTGTTTA +
Preference number: 5 (lower is better)
Translates to: THACLKVWHWVSPQWPSVNKPRR*SVQTCL
Trigger: TAAACAGGTTTGTACTGACAACCTCCTTGGCTTATT...AACCGATGGCCATTGAGGGCTTACCCAGTGCCACACTTTGAGACAAGCATGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GCTTATCTGAGCACAGGATGCGCTTGTTGCTGGGGTAGCCACATGTATATGCTTCAGAAACAATCCACGTaGGCGATATTGGTCAAGCTA +
Preference number: 5 (lower is better)
Translates to: AYLSTGCACCWGSHMYMLQKQST*AILVKL
Trigger: TAGCTTGACCAATATCGCCAACGTGGATTGTTTCTG...AAGCATATACATGTGGCTACCCCAGCAACAAGCGCATCCTGTGCTCAGATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACCTGGTTTTTGGCTGCTaGGCAACTCATAGGGAATGG +
Preference number: 5 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHLVFGC*ATHREW
Trigger: CCATTCCCTATGAGTTGCCAAGCAGCCAAAAACCAG...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp AAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAATCAGCACTTCGAAGTaGGAAACACAAGACCCCATG +
Preference number: 5 (lower is better)
Translates to: KGLLPKMGSTACFFKILAISTSK*ETQDPM
Trigger: CATGGGGTCTTGTGTTTCCAACTTCGAAGTGCTGAT...TGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTACTCTGAAGGATGATTaGGCCATAAAAGGGATCAGA +
Preference number: 5 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACTLKDD*AIKGIR
Trigger: TCTGATCCCTTTTATGGCCAAATCATCCTTCAGAGT...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp AATGATGGCTTTGTTTGCCTTCCCAAGAAGAAATGCATCCCCAGTCAGCTGCTGTCAGTAAGGTTTGAGTaGAGAGTCCAATGGTGGGTT +
Preference number: 5 (lower is better)
Translates to: NDGFVCLPKKKCIPSQLLSVRFE*RVQWWV
Trigger: AACCCACCATTGGACTCTCAACTCAAACCTTACTGA...CAGCAGCTGACTGGGGATGCATTTCTTCTTGGGAAGGCAAACAAAGCCATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp CCGCGTCGACTGTTAGGAGGGCTGCTGCTTCCTAAACTGTTTGAACATAAAGGCTGCTTCCTAAACTGTTaGAACATAAAGGCACACAGA +
Preference number: 5 (lower is better)
Translates to: PRRLLGGLLLPKLFEHKGCFLNC*NIKAHR
Trigger: TCTGTGTGCCTTTATGTTCAAACAGTTTAGGAAGCA...GCCTTTATGTTCAAACAGTTTAGGAAGCAGCAGCCCTCCTAACAGTCGACGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 90 bp AGTGTCGGTAGGAGGTTTTGTTTTTCTGTTCGGCCACAGCAACAATaGTTTGCAAATCATCTGTTGGCCGGAAATGGCGTACAAACCTTT +
Preference number: 5 (lower is better)
Translates to: SVGRRFCFSVRPQQQ*FANHLLAGNGVQTF
Trigger: AAAGGTTTGTACGCCATTTCCGGCCAACAGATGATTTGCAAACCATTGTTGCTGTGGCCGAACAGAAAAACAAAACCTCCTACCGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACCACAGCAACAATGGTTaGCAAATCATCTGTTGGCCG +
Preference number: 5 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHHSNNG*QIICWP
Trigger: CGGCCAACAGATGATTTGCAAACCATTGTTGCTGTG...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp AAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAACCACCTGCCATCTGTaGGTGCAAATTTTCTGGATT +
Preference number: 5 (lower is better)
Translates to: KGLLPKMGSTACFFKILATTCHL*VQIFWI
Trigger: AATCCAGAAAATTTGCACCAACAGATGGCAGGTGGT...TGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp AAACTGACCATGCATGGTAAAGGGCTACTTCCAAAGATGGGGTCAACGGCCTGTGCAGGGTGGCTTTATTaGACATTAGAAACCCATTTA +
Preference number: 5 (lower is better)
Translates to: KLTMHGKGLLPKMGSTACAGWLY*TLETHL
Trigger: TAAATGGGTTTCTAATGTCAAATAAAGCCACCCTGC...ACAGGCCGTTGACCCCATCTTTGGAAGTAGCCCTTTACCATGCATGGTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGAGGACTGGATACTTATaGAGAGAAGAGGAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQRTGYL*REEEAP
Trigger: TGGGGCTTCCTCTTCTCTCAATAAGTATCCAGTCCT...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGTGGCTTTTCTCGGTTTaGGAAGAATTCAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQWLFSV*EEFSPQ
Trigger: CTGTGGGCTGAATTCTTCCAAAACCGAGAAAAGCCA...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp GAGTTGAGAGTCCAATGGTGGGTTCATGTTTTCTTGCCAACACTTTCTTTTCAGTGTGGGATCCTCACTTaGGGGTCCTTTGCAGATAAA +
Preference number: 5 (lower is better)
Translates to: ELRVQWWVHVFLPTLSFQCGILT*GSFADK
Trigger: TTTATCTGCAAAGGACCCCAAAGTGAGGATCCCACA...CTGAAAAGAAAGTGTTGGCAAGAAAACATGAACCCACCATTGGACTCTCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS-3UTR CAA 90 bp ACTTCCAAAGATGGGGTCAACGGCCTGTTTCTTCAAAATACTCGCAAGAAACACACCTATCATGAAGGTTaGTCCTATGCAAAGTTCCTA +
Preference number: 5 (lower is better)
Translates to: TSKDGVNGLFLQNTRKKHTYHEG*SYAKFL
Trigger: TAGGAACTTTGCATAGGACAAACCTTCATGATAGGT...GTGTTTCTTGCGAGTATTTTGAAGAAACAGGCCGTTGACCCCATCTTTGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp GCTTGGCAACTCATAGGGAATGGCTGGAGGCGGAGATaGTATATGATGAGCGCACACCTCCACGCCCTGGGA +
Preference number: 6 (lower is better)
Translates to: AWQLIGNGWRRR*YMMSAHLHALG
Trigger: TCCCAGGGCGTGGAGGTGTGCGCTCATCATATACCATCTCCGCCTCCAGCCATTCCCTATGAGTTGCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 72 bp ACACCTCCACGCCCTGGGATTTCTGCAGACTCGGTCTaGTCCGTCCCTTGGCGGACTTGGGCCTTATCATGT +
Preference number: 6 (lower is better)
Translates to: TPPRPGISADSV*SVPWRTWALSC
Trigger: ACATGATAAGGCCCAAGTCCGCCAAGGGACGGACAAGACCGAGTCTGCAGAAATCCCAGGGCGTGGAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 72 bp GCCCGGATACTGCTCAGTTGCAGTGAGCTGGCCTTTTaGGCAACGGTTTCCACAGCCTCCTCCTCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: ARILLSCSELAF*ATVSTASSSRF
Trigger: GAACCTGGAGGAGGAGGCTGTGGAAACCGTTGCCAAAAAGGCCAGCTCACTGCAACTGAGCAGTATCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS TCA 72 bp CAGCCCTGGAAGAGCCCTGTTTCTTGGTTCGGACGATaGATTTCCTCTCCACGGCACAAGCTCGAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: QPWKSPVSWFGR*ISSPRHKLELW
Trigger: CCAGAGCTCGAGCTTGTGCCGTGGAGAGGAAATTCATCGTCCGAACCAAGAAACAGGGCTCTTCCAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 72 bp TGGTGCCCGTCTCGTCTTGGTAAAGAGCCCGGATACTaGTCAGTTGCAGTGAGCTGGCCTTTTTGGCAACGG +
Preference number: 6 (lower is better)
Translates to: WCPSRLGKEPGY*SVAVSWPFWQR
Trigger: CCGTTGCCAAAAAGGCCAGCTCACTGCAACTGAGCAGTATCCGGGCTCTTTACCAAGACGAGACGGGCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp CCCGGATACTGCTCAGTTGCAGTGAGCTGGCCTTTTTaGCAACGGTTTCCACAGCCTCCTCCTCCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: PGYCSVAVSWPF*QRFPQPPPPGS
Trigger: AGAACCTGGAGGAGGAGGCTGTGGAAACCGTTGCCAAAAAGGCCAGCTCACTGCAACTGAGCAGTATCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 90 bp GATGAGCGCACACCTCCACGCCCTGGGATTTCTGCAGACTCGGTCTaGTCCGTCCCTTGGCGGACTTGGGCCTTATCATGTGCATATTTA +
Preference number: 6 (lower is better)
Translates to: DERTPPRPGISADSV*SVPWRTWALSCAYL
Trigger: TAAATATGCACATGATAAGGCCCAAGTCCGCCAAGGGACGGACAAGACCGAGTCTGCAGAAATCCCAGGGCGTGGAGGTGTGCGCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 90 bp AGAAGCTCCCTGGTTTGGAGATTTGGGTGCACAGGCTCCTGGTTTTaGGCTGCTTGGCAACTCATAGGGAATGGCTGGAGGCGGAGATGG +
Preference number: 6 (lower is better)
Translates to: RSSLVWRFGCTGSWF*AAWQLIGNGWRRRW
Trigger: CCATCTCCGCCTCCAGCCATTCCCTATGAGTTGCCAAGCAGCCAAAAACCAGGAGCCTGTGCACCCAAATCTCCAAACCAGGGAGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp GGTAAAGAGCCCGGATACTGCTCAGTTGCAGTGAGCTaGCCTTTTTGGCAACGGTTTCCACAGCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: GKEPGYCSVAVS*PFWQRFPQPPP
Trigger: AGGAGGAGGCTGTGGAAACCGTTGCCAAAAAGGCCAGCTCACTGCAACTGAGCAGTATCCGGGCTCTTTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 90 bp ACCTCCACGCCCTGGGATTTCTGCAGACTCGGTCTTGTCCGTCCCTaGGCGGACTTGGGCCTTATCATGTGCATATTTAGTGAGTTTGGC +
Preference number: 6 (lower is better)
Translates to: TSTPWDFCRLGLVRP*ADLGLIMCIFSEFG
Trigger: GCCAAACTCACTAAATATGCACATGATAAGGCCCAAGTCCGCCAAGGGACGGACAAGACCGAGTCTGCAGAAATCCCAGGGCGTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS TCA 72 bp GTCTTGGTAAAGAGCCCGGATACTGCTCAGTTGCAGTaGGCTGGCCTTTTTGGCAACGGTTTCCACAGCCTC +
Preference number: 6 (lower is better)
Translates to: VLVKSPDTAQLQ*AGLFGNGFHSL
Trigger: GAGGCTGTGGAAACCGTTGCCAAAAAGGCCAGCTCACTGCAACTGAGCAGTATCCGGGCTCTTTACCAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 72 bp TTGAGAGAAGAGGAAGCCCCAGTGGGTACTTGCTGCTaGAGCTCAGGGATCTCATCAGAAGCTCCCTGGTTT +
Preference number: 6 (lower is better)
Translates to: LREEEAPVGTCC*SSGISSEAPWF
Trigger: AAACCAGGGAGCTTCTGATGAGATCCCTGAGCTGCAGCAGCAAGTACCCACTGGGGCTTCCTCTTCTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 72 bp TTATTGAGAGAAGAGGAAGCCCCAGTGGGTACTTGCTaGTGCAGCTCAGGGATCTCATCAGAAGCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: LLREEEAPVGTC*CSSGISSEAPW
Trigger: CCAGGGAGCTTCTGATGAGATCCCTGAGCTGCAGCAGCAAGTACCCACTGGGGCTTCCTCTTCTCTCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp TCTAACAGCAAGCAGCAACCTTGGTTCTTGGTCCGATaGTTCCTCCAGATTTCCAGCCCTGGAAGAGCCCTG +
Preference number: 6 (lower is better)
Translates to: SNSKQQPWFLVR*FLQISSPGRAL
Trigger: CAGGGCTCTTCCAGGGCTGGAAATCTGGAGGAACCATCGGACCAAGAACCAAGGTTGCTGCTTGCTGTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp TCCCCATCTTCCAGTGAGATGCCCAGCACAGACTTGTaGGGGATTCTGCACTCTTGCAGAGATTTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: SPSSSEMPSTDL*GILHSCRDLVR
Trigger: CCTCACCAAATCTCTGCAAGAGTGCAGAATCCCCCACAAGTCTGTGCTGGGCATCTCACTGGAAGATGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 72 bp ACAGACTTGTGGGGGATTCTGCACTCTTGCAGAGATTaGGTGAGGTCAGAAAATCGCCTCCTGGGCACCTCC +
Preference number: 6 (lower is better)
Translates to: TDLWGILHSCRD*VRSENRLLGTS
Trigger: GGAGGTGCCCAGGAGGCGATTTTCTGACCTCACCAAATCTCTGCAAGAGTGCAGAATCCCCCACAAGTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS TCA 72 bp ACTTGTGGGGGATTCTGCACTCTTGCAGAGATTTGGTaGGGTCAGAAAATCGCCTCCTGGGCACCTCCATTG +
Preference number: 6 (lower is better)
Translates to: TCGGFCTLAEIW*GQKIASWAPPL
Trigger: CAATGGAGGTGCCCAGGAGGCGATTTTCTGACCTCACCAAATCTCTGCAAGAGTGCAGAATCCCCCACAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 72 bp GATCTCATCAGAAGCTCCCTGGTTTGGAGATTTGGGTaGACAGGCTCCTGGTTTTTGGCTGCTTGGCAACTC +
Preference number: 6 (lower is better)
Translates to: DLIRSSLVWRFG*TGSWFLAAWQL
Trigger: GAGTTGCCAAGCAGCCAAAAACCAGGAGCCTGTGCACCCAAATCTCCAAACCAGGGAGCTTCTGATGAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp GTCAACTGCTGTGCTGACAACAGTGCTACACTCAGGTaGTGCTATATTCACAGGGGCTTCTGTGGCCATTGC +
Preference number: 6 (lower is better)
Translates to: VNCCADNSATLR*CYIHRGFCGHC
Trigger: GCAATGGCCACAGAAGCCCCTGTGAATATAGCACCACCTGAGTGTAGCACTGTTGTCAGCACAGCAGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp CCTGGGATTTCTGCAGACTCGGTCTTGTCCGTCCCTTaGCGGACTTGGGCCTTATCATGTGCATATTTAGTG +
Preference number: 6 (lower is better)
Translates to: PGISADSVLSVP*RTWALSCAYLV
Trigger: CACTAAATATGCACATGATAAGGCCCAAGTCCGCCAAGGGACGGACAAGACCGAGTCTGCAGAAATCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp TGGTTTTTGGCTGCTTGGCAACTCATAGGGAATGGCTaGAGGCGGAGATGGTATATGATGAGCGCACACCTC +
Preference number: 6 (lower is better)
Translates to: WFLAAWQLIGNG*RRRWYMMSAHL
Trigger: GAGGTGTGCGCTCATCATATACCATCTCCGCCTCCAGCCATTCCCTATGAGTTGCCAAGCAGCCAAAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 72 bp CCCTGGGATTTCTGCAGACTCGGTCTTGTCCGTCCCTaGGCGGACTTGGGCCTTATCATGTGCATATTTAGT +
Preference number: 6 (lower is better)
Translates to: PWDFCRLGLVRP*ADLGLIMCIFS
Trigger: ACTAAATATGCACATGATAAGGCCCAAGTCCGCCAAGGGACGGACAAGACCGAGTCTGCAGAAATCCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 72 bp CCACGGCACAAGCTCGAGCTCTGGAATCTTCTTCACTaGTCTTCATGGTGCCCGTCTCGTCTTGGTAAAGAG +
Preference number: 6 (lower is better)
Translates to: PRHKLELWNLLH*SSWCPSRLGKE
Trigger: CTCTTTACCAAGACGAGACGGGCACCATGAAGACAAGTGAAGAAGATTCCAGAGCTCGAGCTTGTGCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 90 bp CCCTGGGATTTCTGCAGACTCGGTCTTGTCCGTCCCTTGGCGGACTaGGGCCTTATCATGTGCATATTTAGTGAGTTTGGCTGCCAAATG +
Preference number: 6 (lower is better)
Translates to: PWDFCRLGLVRPLAD*GLIMCIFSEFGCQM
Trigger: CATTTGGCAGCCAAACTCACTAAATATGCACATGATAAGGCCCAAGTCCGCCAAGGGACGGACAAGACCGAGTCTGCAGAAATCCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 90 bp AAGGACTGGATACTTATTGAGAGAAGAGGAAGCCCCAGTGGGTACTaGCTGCTGCAGCTCAGGGATCTCATCAGAAGCTCCCTGGTTTGG +
Preference number: 6 (lower is better)
Translates to: KDWILIERRGSPSGY*LLQLRDLIRSSLVW
Trigger: CCAAACCAGGGAGCTTCTGATGAGATCCCTGAGCTGCAGCAGCAAGTACCCACTGGGGCTTCCTCTTCTCTCAATAAGTATCCAGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 90 bp ATTTCCTCTCCACGGCACAAGCTCGAGCTCTGGAATCTTCTTCACTaGTCTTCATGGTGCCCGTCTCGTCTTGGTAAAGAGCCCGGATAC +
Preference number: 6 (lower is better)
Translates to: ISSPRHKLELWNLLH*SSWCPSRLGKEPGY
Trigger: GTATCCGGGCTCTTTACCAAGACGAGACGGGCACCATGAAGACAAGTGAAGAAGATTCCAGAGCTCGAGCTTGTGCCGTGGAGAGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 90 bp ATGCCCAGCACAGACTTGTGGGGGATTCTGCACTCTTGCAGAGATTaGGTGAGGTCAGAAAATCGCCTCCTGGGCACCTCCATTGTTTCA +
Preference number: 6 (lower is better)
Translates to: MPSTDLWGILHSCRD*VRSENRLLGTSIVS
Trigger: TGAAACAATGGAGGTGCCCAGGAGGCGATTTTCTGACCTCACCAAATCTCTGCAAGAGTGCAGAATCCCCCACAAGTCTGTGCTGGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS TCA 72 bp TGGCCGGAAATGGCGTACAAACCTTTGGCCTGTTGGTaGTCTAACAGCAAGCAGCAACCTTGGTTCTTGGTC +
Preference number: 6 (lower is better)
Translates to: WPEMAYKPLACW*SNSKQQPWFLV
Trigger: GACCAAGAACCAAGGTTGCTGCTTGCTGTTAGATCACCAACAGGCCAAAGGTTTGTACGCCATTTCCGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 72 bp AACTGCTGTGCTGACAACAGTGCTACACTCAGGTGGTaGTATATTCACAGGGGCTTCTGTGGCCATTGCTTC +
Preference number: 6 (lower is better)
Translates to: NCCADNSATLRW*YIHRGFCGHCF
Trigger: GAAGCAATGGCCACAGAAGCCCCTGTGAATATAGCACCACCTGAGTGTAGCACTGTTGTCAGCACAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS GCA 72 bp CTTGTCCGTCCCTTGGCGGACTTGGGCCTTATCATGTaGATATTTAGTGAGTTTGGCTGCCAAATGAGGCTG +
Preference number: 6 (lower is better)
Translates to: LVRPLADLGLIM*IFSEFGCQMRL
Trigger: CAGCCTCATTTGGCAGCCAAACTCACTAAATATGCACATGATAAGGCCCAAGTCCGCCAAGGGACGGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp AAGCTCGAGCTCTGGAATCTTCTTCACTTGTCTTCATaGTGCCCGTCTCGTCTTGGTAAAGAGCCCGGATAC +
Preference number: 6 (lower is better)
Translates to: KLELWNLLHLSS*CPSRLGKEPGY
Trigger: GTATCCGGGCTCTTTACCAAGACGAGACGGGCACCATGAAGACAAGTGAAGAAGATTCCAGAGCTCGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp GTTGGTGATCTAACAGCAAGCAGCAACCTTGGTTCTTaGTCCGATGGTTCCTCCAGATTTCCAGCCCTGGAA +
Preference number: 6 (lower is better)
Translates to: VGDLTASSNLGS*SDGSSRFPALE
Trigger: TTCCAGGGCTGGAAATCTGGAGGAACCATCGGACCAAGAACCAAGGTTGCTGCTTGCTGTTAGATCACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 72 bp TTCTGCAGACTCGGTCTTGTCCGTCCCTTGGCGGACTaGGGCCTTATCATGTGCATATTTAGTGAGTTTGGC +
Preference number: 6 (lower is better)
Translates to: FCRLGLVRPLAD*GLIMCIFSEFG
Trigger: GCCAAACTCACTAAATATGCACATGATAAGGCCCAAGTCCGCCAAGGGACGGACAAGACCGAGTCTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 72 bp ATACTTATTGAGAGAAGAGGAAGCCCCAGTGGGTACTaGCTGCTGCAGCTCAGGGATCTCATCAGAAGCTCC +
Preference number: 6 (lower is better)
Translates to: ILIERRGSPSGY*LLQLRDLIRSS
Trigger: GGAGCTTCTGATGAGATCCCTGAGCTGCAGCAGCAAGTACCCACTGGGGCTTCCTCTTCTCTCAATAAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp TTCGGCCACAGCAACAATGGTTTGCAAATCATCTGTTaGCCGGAAATGGCGTACAAACCTTTGGCCTGTTGG +
Preference number: 6 (lower is better)
Translates to: FGHSNNGLQIIC*PEMAYKPLACW
Trigger: CCAACAGGCCAAAGGTTTGTACGCCATTTCCGGCCAACAGATGATTTGCAAACCATTGTTGCTGTGGCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 72 bp GTTCGGCCACAGCAACAATGGTTTGCAAATCATCTGTaGGCCGGAAATGGCGTACAAACCTTTGGCCTGTTG +
Preference number: 6 (lower is better)
Translates to: VRPQQQWFANHL*AGNGVQTFGLL
Trigger: CAACAGGCCAAAGGTTTGTACGCCATTTCCGGCCAACAGATGATTTGCAAACCATTGTTGCTGTGGCCGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 90 bp TCGGTAGGAGGTTTTGTTTTTCTGTTCGGCCACAGCAACAATGGTTaGCAAATCATCTGTTGGCCGGAAATGGCGTACAAACCTTTGGCC +
Preference number: 6 (lower is better)
Translates to: SVGGFVFLFGHSNNG*QIICWPEMAYKPLA
Trigger: GGCCAAAGGTTTGTACGCCATTTCCGGCCAACAGATGATTTGCAAACCATTGTTGCTGTGGCCGAACAGAAAAACAAAACCTCCTACCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp AAATCATCTGTTGGCCGGAAATGGCGTACAAACCTTTaGCCTGTTGGTGATCTAACAGCAAGCAGCAACCTT +
Preference number: 6 (lower is better)
Translates to: KSSVGRKWRTNL*PVGDLTASSNL
Trigger: AAGGTTGCTGCTTGCTGTTAGATCACCAACAGGCCAAAGGTTTGTACGCCATTTCCGGCCAACAGATGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp GCAACAATGGTTTGCAAATCATCTGTTGGCCGGAAATaGCGTACAAACCTTTGGCCTGTTGGTGATCTAACA +
Preference number: 6 (lower is better)
Translates to: ATMVCKSSVGRK*RTNLWPVGDLT
Trigger: TGTTAGATCACCAACAGGCCAAAGGTTTGTACGCCATTTCCGGCCAACAGATGATTTGCAAACCATTGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CCA 72 bp AGGAGGTTTTGTTTTTCTGTTCGGCCACAGCAACAATaGTTTGCAAATCATCTGTTGGCCGGAAATGGCGTA +
Preference number: 6 (lower is better)
Translates to: RRFCFSVRPQQQ*FANHLLAGNGV
Trigger: TACGCCATTTCCGGCCAACAGATGATTTGCAAACCATTGTTGCTGTGGCCGAACAGAAAAACAAAACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4
CDS CAA 72 bp GGTTTTGTTTTTCTGTTCGGCCACAGCAACAATGGTTaGCAAATCATCTGTTGGCCGGAAATGGCGTACAAA +
Preference number: 6 (lower is better)
Translates to: GFVFLFGHSNNG*QIICWPEMAYK
Trigger: TTTGTACGCCATTTCCGGCCAACAGATGATTTGCAAACCATTGTTGCTGTGGCCGAACAGAAAAACAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375099.4