RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBR5 (Homo sapiens)

Ensembl gene IDs: ENSG00000104517

Ensembl transcript IDs: ENST00000220959.8, ENST00000517465.1, ENST00000518145.1, ENST00000518205.5, ENST00000519365.1, ENST00000519528.1, ENST00000520539.6, ENST00000520898.5, ENST00000521312.1, ENST00000521566.1, ENST00000521767.1, ENST00000521922.5, ENST00000522327.1

Found 682 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTAGACTGACTGCTCATTaGAATAGGGATACAAAGAAA +
Preference number: 2 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVRLTAH*NRDTKK
Trigger: TTTCTTTGTATCCCTATTTCAATGAGCAGTCAGTCT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
3UTR-3UTR GCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTATCCTAGAGCTCAATaGAGTCAAACCGCAATAAAA +
Preference number: 2 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVYPRAQ*SQTAIK
Trigger: TTTTATTGCGGTTTGACTGCATTGAGCTCTAGGATA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
3UTR-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTAAAAGTATTGTGCATTaGCCCCATCATATGTACAAA +
Preference number: 2 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVKSIVH*PHHMYK
Trigger: TTTGTACATATGATGGGGCCAATGCACAATACTTTT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520539.6
3UTR-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACAATATAGCCAAATGTaGCTAGTGCTCCTTAGGCCT +
Preference number: 3 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRQYSQM*LVLLRP
Trigger: AGGCCTAAGGAGCACTAGCAACATTTGGCTATATTG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
3UTR TCA 72 bp AGACTATCCTCAAGGCCAGAAATCCTACAAAGGAACTaGAAGGAGAGATTCCAGAGAATTGCTCTCCTCATT +
Preference number: 3 (lower is better)
Translates to: RLSSRPEILQRN*KERFQRIALLI
Trigger: AATGAGGAGAGCAATTCTCTGGAATCTCTCCTTTCAGTTCCTTTGTAGGATTTCTGGCCTTGAGGATAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
3UTR-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCAATATAGCCAAATGTaGCTAGTGCTCCTTAGGCCT +
Preference number: 3 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSQYSQM*LVLLRP
Trigger: AGGCCTAAGGAGCACTAGCAACATTTGGCTATATTG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
3UTR-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTATTGTGATAAAAGTATaGTGCATTGGCCCCATCATA +
Preference number: 3 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVIVIKV*CIGPII
Trigger: TATGATGGGGCCAATGCACAATACTTTTATCACAAT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520539.6
3UTR TCA 72 bp CTGAAGTGCAGTAACCTCTTGAGACTGACTGCTCATTaGAATAGGGATACAAAGAAAAAGTTGATTGTGATA +
Preference number: 3 (lower is better)
Translates to: LKCSNLLRLTAH*NRDTKKKLIVI
Trigger: TATCACAATCAACTTTTTCTTTGTATCCCTATTTCAATGAGCAGTCAGTCTCAAGAGGTTACTGCACTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520539.6
3UTR TCA 72 bp TTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTaGAGGAAGTTATATAATAAAAGCATAGTGCCTTTG +
Preference number: 3 (lower is better)
Translates to: LTGLRISCGSVF*RKLYNKSIVPL
Trigger: CAAAGGCACTATGCTTTTATTATATAACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGAGGAGAGGGGCGGCTaGTGGCTGCGGGCTACGGGG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLEERGG*WLRATG
Trigger: CCCCGTAGCCCGCAGCCAGCAGCCGCCCCTCTCCTC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGAGAGGGGCGGCTGCTaGCTGCGGGCTACGGGGACG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIERGGC*LRATGT
Trigger: CGTCCCCGTAGCCCGCAGCCAGCAGCCGCCCCTCTC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAGGAGGGGAAGGAGATaGGCCCGCACCGCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLRRGRR*ARTARH
Trigger: GTGACGCGCGGTGCGGGCTCATCTCCTTCCCCTCCT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATGTCCTACCAGGCCTTaGCGTCCTCCCTGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRCPTRP*RPPCPR
Trigger: TCGGGGGCAGGGAGGACGTCAAGGCCTGGTAGGACA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGAGAGGGGCGGCTGCTaGCTGCGGGCTACGGGGACG +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVERGGC*LRATGT
Trigger: CGTCCCCGTAGCCCGCAGCCAGCAGCCGCCCCTCTC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAGGAGGGGAAGGAGATaGGCCCGCACCGCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIRRGRR*ARTARH
Trigger: GTGACGCGCGGTGCGGGCTCATCTCCTTCCCCTCCT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGTGCCCGGCAGCGGGTaGACCACGAAATGGATGGAC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRVPGSG*TTKWMD
Trigger: GTCCATCCATTTCGTGGTTCACCCGCTGCCGGGCAC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACGGGCTGTGACTGGCTaGTGCGCCTCTGCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRRAVTG*CASAVD
Trigger: ATCCACAGCAGAGGCGCATCAGCCAGTCACAGCCCG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTGGCTGGGGCTGACTaGCCAAAAGCCCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLAGAD*PKAQTL
Trigger: GAGGGTCTGGGCTTTTGGGCAGTCAGCCCCAGCCAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGTCCTACCAGGCCTTaGCGTCCTCCCTGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFICPTRP*RPPCPR
Trigger: TCGGGGGCAGGGAGGACGTCAAGGCCTGGTAGGACA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACAGCAGTTGCTGCAGTaGCAACGCTTCTGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRQQLLQ*QRFCAH
Trigger: GTGGGCGCAGAAGCGTTGTCACTGCAGCAACTGCTG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGAGGAGAGGGGCGGCTaGTGGCTGCGGGCTACGGGG +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSEERGG*WLRATG
Trigger: CCCCGTAGCCCGCAGCCAGCAGCCGCCCCTCTCCTC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATGGAAGGGGCTGTACTaGCTGCTCGCTGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRWKGLY*LLADAG
Trigger: CCCAGCATCAGCGAGCAGCCAGTACAGCCCCTTCCA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGTGCCCGGCAGCGGGTaGACCACGAAATGGATGGAC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIVPGSG*TTKWMD
Trigger: GTCCATCCATTTCGTGGTTCACCCGCTGCCGGGCAC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTCGTAACCTGTCATTaGGCTGGTCCTCGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLVTCH*AGPRCP
Trigger: CGGGCACCGAGGACCAGCTCAATGACAGGTTACGAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGGCTTCCTAAGGTGTTaGCTGCCAGCCTGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRGFLRC*LPACLE
Trigger: CTCTAGGCAGGCTGGCAGGCAACACCTTAGGAAGCC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTGGCTGGGGCTGACTaGCCAAAAGCCCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILAGAD*PKAQTL
Trigger: GAGGGTCTGGGCTTTTGGGCAGTCAGCCCCAGCCAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAACCTGTCATTGAGCTaGTCCTCGGTGCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLNLSLS*SSVPGS
Trigger: GCTGCCGGGCACCGAGGACCAGCTCAATGACAGGTT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCGAACGGGCTGTGACTaGCTGATGCGCCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLRTGCD*LMRLCC
Trigger: ACAGCAGAGGCGCATCAGCCAGTCACAGCCCGTTCG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATAACTGGCTGGGGCTaGCTGCCCAAAAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLITGWG*LPKSPD
Trigger: GTCTGGGCTTTTGGGCAGTCAGCCCCAGCCAGTTAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGCCCCGAACGGGCTGTaGCTGGCTGATGCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSAPNGL*LADAPL
Trigger: CAGAGGCGCATCAGCCAGTCACAGCCCGTTCGGGGC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGCAGACATCATTCCTTaGCGGGCGCTAAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRADIIP*RALSKV
Trigger: CACCTTGCTTAGCGCCCGTCAAGGAATGATGTCTGC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATGCAACAGATGTGGCTaGTCAGCCAAGGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRCNRCG*SAKGMA
Trigger: AGCCATCCCCTTGGCTGATCAGCCACATCTGTTGCA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGGCTTCCTAAGGTGTTaGCTGCCAGCCTGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLGFLRC*LPACLE
Trigger: CTCTAGGCAGGCTGGCAGGCAACACCTTAGGAAGCC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGCTGATGCTGGGTGTTaGGGACAGCCCACTGCATTG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLADAGC*GQPTAL
Trigger: CAATGCAGTGGGCTGTCCGCAACACCCAGCATCAGC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAGGGGCTGTACTGGCTaGTCGCTGATGCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLRGCTG*SLMLGV
Trigger: AACACCCAGCATCAGCGAGCAGCCAGTACAGCCCCT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAAGTGCCTGCCGATGTaGTGGCAAAGGCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRKCLPM*WQRLRI
Trigger: GATCCTGAGCCTTTGCCAGCACATCGGCAGGCACTT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAAGCCTCTCTCCAAGTaGCTGCCGATGTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRKPLSK*LPMCWQ
Trigger: TTGCCAGCACATCGGCAGGCACTTGGAGAGAGGCTT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATCACTAGCGAGAAGCTaGCGCCGCCATCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRSLARS*RRHLHF
Trigger: GAAGTGAAGATGGCGGCGGCAGCTTCTCGCTAGTGA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCGAGGTGGCCTGTATTaGCAATGCTCCACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIRGGLY*QCSTVC
Trigger: GCAGACGGTGGAGCATTGTCAATACAGGCCACCTCG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCAGCAGTTGCTGCAGTaGCAACGCTTCTGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVQQLLQ*QRFCAH
Trigger: GTGGGCGCAGAAGCGTTGTCACTGCAGCAACTGCTG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCGAATAACTCGAGTCTaGCGGCGGGAATCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLRITRV*RRESRA
Trigger: AGCTCGAGATTCCCGCCGGCAGACTCGAGTTATTCG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAGCCAGGGTAAATGGTaGAGTTGGACGAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRSQGKW*SWTSNP
Trigger: GGGATTGCTCGTCCAACTGCACCATTTACCCTGGCT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTTGCGGACAGCCCACTaGATTGAACGGGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILRTAH*IERGAW
Trigger: CCAAGCTCCCCGTTCAATGCAGTGGGCTGTCCGCAA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAGGTGGCACGTCGTCTaGCTTCAAGTGTTCGTAAGC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRRWHVV*LQVFVS
Trigger: GCTTACGAACACTTGAAGGCAGACGACGTGCCACCT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTCGTGCTACACCACTaGCCTCTCCTGGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLFVLHH*PLLAHP
Trigger: AGGATGAGCCAGGAGAGGGCAGTGGTGTAGCACGAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTCTCTCCAAGTGCCTaGCGATGTGCTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILSPSA*RCAGKG
Trigger: GCCTTTGCCAGCACATCGGCAGGCACTTGGAGAGAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAGGTGGCCAGGCCAGTaGCATTTAGGATTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRRWPGQ*HLGFSA
Trigger: AGCAGAGAATCCTAAATGGCACTGGCCTGGCCACCT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTCCCAGTCCCCAAATaGAGGGAAGCAAATACGCAG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLPVPK*REANTQ
Trigger: CTGCGTATTTGCTTCCCTCCATTTGGGGACTGGGAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTCTGTGGAAGGACCTaGAATAGTGGAGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLCGRT*NSGGAW
Trigger: CCAAGCACCTCCACTATTCCAGGTCCTTCCACAGAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACGCTCCAATGCAAGCTaGGCAAATCTTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRRSNAS*ANLGGS
Trigger: AGAGCCTCCAAGATTTGCCCAGCTTGCATTGGAGCG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCGAACGGGCTGTGACTaGCTGATGCGCCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVRTGCD*LMRLCC
Trigger: ACAGCAGAGGCGCATCAGCCAGTCACAGCCCGTTCG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATTGAACGGGGAGCTTaGGCAGCACCATTGGCATGG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLIERGA*AAPLAW
Trigger: CCATGCCAATGGTGCTGCCCAAGCTCCCCGTTCAAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTGCCTGCCGATGTGCTaGCAAAGGCTCAGGATCATC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLCLPMC*QRLRII
Trigger: GATGATCCTGAGCCTTTGCCAGCACATCGGCAGGCA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTTCGACTAGAGCCATaGCGCTTTCGGTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLRLEP*RFRFSC
Trigger: GCAGGAAAACCGAAAGCGCCATGGCTCTAGTCGAAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTATAACTGGCTGGGGCTaGCTGCCCAAAAGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVITGWG*LPKSPD
Trigger: GTCTGGGCTTTTGGGCAGTCAGCCCCAGCCAGTTAT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTTTGGTGCAGGGGTTaGCCGTCGTCGTTTGTATGG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLFWCRG*PSSFVW
Trigger: CCATACAAACGACGACGGTCAACCCCTGCACCAAAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGAGGTGCTTGGTCCTTaGCCAGTACCGGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVEVLGP*PVPVAA
Trigger: AGCAGCAACCGGTACTGGTCAAGGACCAAGCACCTC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATCAGGGTTGGTACCTaGTGGGCAAACCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRIRVGT*WANHSH
Trigger: ATGGGAATGGTTTGCCCATCAGGTACCAACCCTGAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCGAGGTGGCCTGTATTaGCAATGCTCCACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVRGGLY*QCSTVC
Trigger: GCAGACGGTGGAGCATTGTCAATACAGGCCACCTCG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTGGAGCTGCTAGACTaGTCAGATGATGGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLELLD*SDDGRG
Trigger: ACCACGACCATCATCTGATCAGTCTAGCAGCTCCAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACCTGATGATGTAGGATaGCTGAGACTGACTGGAGCT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRPDDVG*LRLTGA
Trigger: AGCTCCAGTCAGTCTCAGTCATCCTACATCATCAGG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCGGGCTGTGACTGGCTaGTGCGCCTCTGCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSRAVTG*CASAVD
Trigger: ATCCACAGCAGAGGCGCATCAGCCAGTCACAGCCCG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGCAGACATCATTCCTTaGCGGGCGCTAAGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIADIIP*RALSKV
Trigger: CACCTTGCTTAGCGCCCGTCAAGGAATGATGTCTGC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGCAACAGATGTGGCTaGTCAGCCAAGGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFICNRCG*SAKGMA
Trigger: AGCCATCCCCTTGGCTGATCAGCCACATCTGTTGCA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATGTGCAGCAAGATCATaGGCAGATGGCCCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRCAARS*ADGPGF
Trigger: AAAACCAGGGCCATCTGCTCATGATCTTGCTGCACA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGGATGGACGTCATGGTaGTTTCCTTCTCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLGWTSW*FPSRPP
Trigger: TGGAGGACGAGAAGGAAAGCACCATGACGTCCATCC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTCCCTGCCCCCGAGTTaGTGTTCAACTTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLSLPPS*CSTLTH
Trigger: ATGGGTCAAAGTTGAACAGCAACTCGGGGGCAGGGA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATCACTACACGTGGATaGTGGAGATGGTGGAGGACC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLITTRG*WRWWRT
Trigger: GGTCCTCCACCATCTCCAGCATCCACGTGTAGTGAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGACCAGTACCGGTTGCTaGTGTGGTAAGAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLTSTGC*CGKRSH
Trigger: GTGGGATCTCTTACCACAGCAGCAACCGGTACTGGT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATTGACCAGTACCGGTTaGTGCTGTGGTAAGAGATCC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLTSTG*CCGKRS
Trigger: GGATCTCTTACCACAGCAGCAACCGGTACTGGTCAA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCAATGCTCCACCGTCTaGCTTGCGACTGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLQCSTV*LATVCT
Trigger: AGTACAGACAGTCGCAAGGCAGACGGTGGAGCATTG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTGGCTGATGCGCCTCTaGTGTGGATTCCTGATGATG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLWLMRL*CGFLMM
Trigger: CATCATCAGGAATCCACAGCAGAGGCGCATCAGCCA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCCTGTTCTTCATCTCTaGCCCGAACGGGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIPVLHL*PERAVT
Trigger: AGTCACAGCCCGTTCGGGGCAGAGATGAAGAACAGG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGCTGATGCTGGGTGTTaGGGACAGCCCACTGCATTG +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVADAGC*GQPTAL
Trigger: CAATGCAGTGGGCTGTCCGCAACACCCAGCATCAGC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATTCCAAAGCAGCTGCTaGAGCTGCAGCACTTGTACT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRFQSSC*SCSTCT
Trigger: AGTACAAGTGCTGCAGCTGCAGCAGCTGCTTTGGAA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTTCGTGCTACACCACTaGCCTCTCCTGGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIFVLHH*PLLAHP
Trigger: AGGATGAGCCAGGAGAGGGCAGTGGTGTAGCACGAA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGTCCCTCCGAGAACCTaGTCGCAAACCACTACTCCT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIVPPRT*SQTTTP
Trigger: AGGAGTAGTGGTTTGCGAGCAGGTTCTCGGAGGGAC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATGGAATGACAGATGCTaGAATAACTGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRWNDRC*NNWLGL
Trigger: CAGCCCCAGCCAGTTATTCCAGCATCTGTCATTCCA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGACTACACGTGGATGCTaGAGATGGTGGAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLTTRGC*RWWRTH
Trigger: ATGGGTCCTCCACCATCTCCAGCATCCACGTGTAGT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATGCATCACTACACGTaGATGCTGGAGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRMHHYT*MLEMVE
Trigger: CTCCACCATCTCCAGCATCCACGTGTAGTGATGCAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAGAAGGGTCAGCATCTaGACCAGAGCTGTTCTGACA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRRRVSI*TRAVLT
Trigger: TGTCAGAACAGCTCTGGTCCAGATGCTGACCCTTCT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGAAACTGGATCCTGGTaGTCACTGGATGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRETGSW*SLDEAP
Trigger: TGGAGCTTCATCCAGTGACCACCAGGATCCAGTTTC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAATAGTGGAGGTGCTTaGTCCTTGACCAGTACCGGT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRNSGGA*SLTSTG
Trigger: ACCGGTACTGGTCAAGGACCAAGCACCTCCACTATT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGATGCGCCTCTGCTGTaGATTCCTGATGATGTAGGA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRDAPLL*IPDDVG
Trigger: TCCTACATCATCAGGAATCCACAGCAGAGGCGCATC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCATTGAACGGGGAGCTTaGGCAGCACCATTGGCATGG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIIERGA*AAPLAW
Trigger: CCATGCCAATGGTGCTGCCCAAGCTCCCCGTTCAAT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAACCACTGCCCTCTCCTaGCTCATCCTTAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRTTALS*LILKCD
Trigger: GTCACATTTAAGGATGAGCCAGGAGAGGGCAGTGGT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGGAATCCTTCTTCACTaGCTGGCAGTGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLGILLH*LAVMGL
Trigger: CAAGCCCATCACTGCCAGCCAGTGAAGAAGGATTCC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAACAACTTGGGCCTGTaGAATCAGCTCCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRNNLGL*NQLLWN
Trigger: ATTCCAGAGGAGCTGATTTCACAGGCCCAAGTTGTT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACCTGGGTACCAACAGTaGTGTTCGGCATTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRPGYQQ*CSALKK
Trigger: TTTCTTCAATGCCGAACATCACTGTTGGTACCCAGG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTGGTGGTCACTGGATaGAGCTCCAGCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILVVTG*SSSFMS
Trigger: AGACATGAAGCTGGAGCTTCATCCAGTGACCACCAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTCGGCCACTTACAGCTaGCATAAATGGGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFISATYS*HKWGHP
Trigger: GGGATGACCCCATTTATGTCAGCTGTAAGTGGCCGA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCGTACAACAACACAGTaGCTCCAGCAAGCCACAAGT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLRTTTQ*LQQATS
Trigger: ACTTGTGGCTTGCTGGAGTCACTGTGTTGTTGTACG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAACAGTAGGCTGTTGGTaGTGTCCGTTTGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRTVGCW*CPFEFA
Trigger: TGCAAACTCAAACGGACATCACCAACAGCCTACTGT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGGTTACGATCTTCCCTaGTTCGAGGTGGCCTGTATT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLGYDLP*FEVACI
Trigger: AATACAGGCCACCTCGAATCAGGGAAGATCGTAACC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGAGCAATCCCCATTCTaGCAGGAACAATCAGTGACT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPREQSPF*QEQSVT
Trigger: AGTCACTGATTGTTCCTGTCAGAATGGGGATTGCTC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGTACTGGCTGCTCGCTaGTGCTGGGTGTTGCGGACA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSVLAAR*CWVLRT
Trigger: TGTCCGCAACACCCAGCATCAGCGAGCAGCCAGTAC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACCCACTACTGGCAGATaGAGAATAAAGACCCTGACT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRPTTGR*RIKTLT
Trigger: AGTCAGGGTCTTTATTCTTCATCTGCCAGTAGTGGG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTGTGCAGCAAGATCATaGGCAGATGGCCCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLCAARS*ADGPGF
Trigger: AAAACCAGGGCCATCTGCTCATGATCTTGCTGCACA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTCAGCATCTGAACTCTaGGACGCGAGGATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLSASEL*DARISC
Trigger: GCAACTAATCCTCGCGTCTCAGAGTTCAGATGCTGA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAACAGCATCAGCATCTaGACTCTGAGACGCGAGGAT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLNSISI*TLRRED
Trigger: ATCCTCGCGTCTCAGAGTTCAGATGCTGATGCTGTT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCAATGCTCCACCGTCTaGCTTGCGACTGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIQCSTV*LATVCT
Trigger: AGTACAGACAGTCGCAAGGCAGACGGTGGAGCATTG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAGCCAGGGTAAATGGTaGAGTTGGACGAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFISQGKW*SWTSNP
Trigger: GGGATTGCTCGTCCAACTGCACCATTTACCCTGGCT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAGAAGGCAGGAACACTaGTTGCTCCTGCTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLRRQEH*LLLLLN
Trigger: GTTCAGAAGCAGGAGCAAGCAGTGTTCCTGCCTTCT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAGGTGGCACGTCGTCTaGCTTCAAGTGTTCGTAAGC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIRWHVV*LQVFVS
Trigger: GCTTACGAACACTTGAAGGCAGACGACGTGCCACCT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAGATGCTGGAATAACTaGCTGGGGCTGACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIRCWNN*LGLTAQ
Trigger: TTGGGCAGTCAGCCCCAGCCAGTTATTCCAGCATCT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTGGAATGACAGATGCTaGAATAACTGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLWNDRC*NNWLGL
Trigger: CAGCCCCAGCCAGTTATTCCAGCATCTGTCATTCCA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGAGATGAGCCTAGCCTaGAAAGTGATGAACGACGAA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPREMSLA*KVMNDE
Trigger: TTCGTCGTTCATCACTTTCCAGGCTAGGCTCATCTC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGGATGCTGGAGATGGTaGAGGACCCATTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRGCWRW*RTHFCF
Trigger: AAAACAGAAATGGGTCCTCCACCATCTCCAGCATCC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCGTGGATGCTGGAGATaGTGGAGGACCCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIRGCWR*WRTHFC
Trigger: ACAGAAATGGGTCCTCCACCATCTCCAGCATCCACG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATGCATCACTACACGTaGATGCTGGAGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLMHHYT*MLEMVE
Trigger: CTCCACCATCTCCAGCATCCACGTGTAGTGATGCAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTCCCATGCAATCTTTaGCCATTGGGTAGATGGTAC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLPCNL*PLGRWY
Trigger: GTACCATCTACCCAATGGCCAAAGATTGCATGGGAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGAGAGTCATCAGGGTTaGTACCTGATGGGCAAACCA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLESHQG*YLMGKP
Trigger: TGGTTTGCCCATCAGGTACCAACCCTGATGACTCTC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTCTCCCCTGCTGTTTaGCAGAGTAACCAGATTAGT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLSPAV*QSNQIS
Trigger: ACTAATCTGGTTACTCTGCCAAACAGCAGGGGAGAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAACTAGCCAGGGTAAATaGTGCAGTTGGACGAGCAAT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRTSQGK*CSWTSN
Trigger: ATTGCTCGTCCAACTGCACCATTTACCCTGGCTAGT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTTGGGCAGCACCATTaGCATGGGAGCTATTTGTGG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILGQHH*HGSYLW
Trigger: CCACAAATAGCTCCCATGCCAATGGTGCTGCCCAAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACAATGCTGTAAGCCCTaGCTAAACTGCTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRQCCKP*LNCLQM
Trigger: CATCTGCAAGCAGTTTAGCCAGGGCTTACAGCATTG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGGCTGCAACAGATGTaGCTGATCAGCCAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIWLQQM*LISQGD
Trigger: ATCCCCTTGGCTGATCAGCCACATCTGTTGCAGCCA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGACCACTGCCCTCTCCTaGCTCATCCTTAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLTTALS*LILKCD
Trigger: GTCACATTTAAGGATGAGCCAGGAGAGGGCAGTGGT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATTCCCTTCAGAGGCTaGTCTAAAGGGCCTAGTGTC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLIPFRG*SKGPSV
Trigger: GACACTAGGCCCTTTAGACCAGCCTCTGAAGGGAAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAGAAGAAAGGCAGCATaGTTTGGTCCCACCACACAC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIRRKAA*FGPTTH
Trigger: GTGTGTGGTGGGACCAAATCATGCTGCCTTTCTTCT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAACAACTTGGGCCTGTaGAATCAGCTCCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLNNLGL*NQLLWN
Trigger: ATTCCAGAGGAGCTGATTTCACAGGCCCAAGTTGTT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAATCCCAGCACTAATTaGAAATGCAACTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRNPSTN*KCNCSS
Trigger: GCTGGAGCAGTTGCATTTTCAATTAGTGCTGGGATT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGCACTGCTGGCAATTaGGGATGCATCACTACACGT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFICTAGN*GCITTR
Trigger: ACGTGTAGTGATGCATCCTCAATTGCCAGCAGTGCA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTTTTGGTGCAGGGGTTaGCCGTCGTCGTTTGTATGG +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVFWCRG*PSSFVW
Trigger: CCATACAAACGACGACGGTCAACCCCTGCACCAAAA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAACATTCCTCTCATTCTaGCCAAGGAAAGCAATGCTG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRTFLSF*PRKAML
Trigger: CAGCATTGCTTTCCTTGGTCAGAATGAGAGGAATGT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATTCCTGTCCAGCAGTaGAAATGGCTACATTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRIPVQQ*KWLHSS
Trigger: AGAGGAATGTAGCCATTTTCACTGCTGGACAGGAAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGAGGTGCTTGGTCCTTaGCCAGTACCGGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSEVLGP*PVPVAA
Trigger: AGCAGCAACCGGTACTGGTCAAGGACCAAGCACCTC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGACAGTAGGCTGTTGGTaGTGTCCGTTTGAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLTVGCW*CPFEFA
Trigger: TGCAAACTCAAACGGACATCACCAACAGCCTACTGT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATGCCACTTTGCTGATTaGGGTATACTTGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRCHFAD*GILALL
Trigger: CAGAAGAGCAAGTATACCTCAATCAGCAAAGTGGCA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCCTGATGATGTAGGATaGCTGAGACTGACTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIPDDVG*LRLTGA
Trigger: AGCTCCAGTCAGTCTCAGTCATCCTACATCATCAGG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTGCCTCATAGTCTGCTaGATGAGAAGATCTCGATCC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLCLIVC*MRRSRS
Trigger: GGATCGAGATCTTCTCATTCAGCAGACTATGAGGCA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATCAGCATTTGCACATTaGCTTCACCGCAGCCATTTA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRSAFAH*LHRSHL
Trigger: TAAATGGCTGCGGTGAAGTCAATGTGCAAATGCTGA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCACCAGAACCAACGCTTaGACTGCAGAAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFITRTNA*TAEASQ
Trigger: CTGAGAAGCTTCTGCAGTTCAAGCGTTGGTTCTGGT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATGGCTGATGAATGTCTaGAGCATCTGTAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRWLMNV*SICRFC
Trigger: GCAGAATCTACAGATGCTGCAGACATTCATCAGCCA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTCTACCCAAACCAGCTaGTCTCAACGAACGTCTCAT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLSTQTS*SQRTSH
Trigger: ATGAGACGTTCGTTGAGAGCAGCTGGTTTGGGTAGA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTTGACCAGTACCGGTTaGTGCTGTGGTAAGAGATCC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILTSTG*CCGKRS
Trigger: GGATCTCTTACCACAGCAGCAACCGGTACTGGTCAA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAAGAATAGTAAGAGGTaGTCTCCCCTGCTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLKNSKR*SPLLFG
Trigger: GCCAAACAGCAGGGGAGAGCACCTCTTACTATTCTT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGTGACTCTGCTACGTTaGACAATTCTTCCACAGCGT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLVTLLR*TILPQR
Trigger: ACGCTGTGGAAGAATTGTGCAACGTAGCAGAGTCAC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAGAAGGCAGGAACACTaGTTGCTCCTGCTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIRRQEH*LLLLLN
Trigger: GTTCAGAAGCAGGAGCAAGCAGTGTTCCTGCCTTCT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTTCCAAAGCAGCTGCTaGAGCTGCAGCACTTGTACT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIFQSSC*SCSTCT
Trigger: AGTACAAGTGCTGCAGCTGCAGCAGCTGCTTTGGAA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTTGCAAATGCTGGTTaGATTGCTTGTACACGAGGA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLANAG*IACTRG
Trigger: TCCTCGTGTACAAGCAATGCAACCAGCATTTGCAAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGGCCTCATCCACTCTTaGTCTCAGAGAATCCTCACT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIGLIHS*SQRILT
Trigger: AGTGAGGATTCTCTGAGAGCAAGAGTGGATGAGGCC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGAGATGAGCCTAGCCTaGAAAGTGATGAACGACGAA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLEMSLA*KVMNDE
Trigger: TTCGTCGTTCATCACTTTCCAGGCTAGGCTCATCTC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTCCCATGCAATCTTTaGCCATTGGGTAGATGGTAC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLPCNL*PLGRWY
Trigger: GTACCATCTACCCAATGGCCAAAGATTGCATGGGAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGGATTCTACTACAGATaGCTCTGTGGAAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIGFYYR*LCGRTW
Trigger: CCAGGTCCTTCCACAGAGCCATCTGTAGTAGAATCC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATCCCTCTTGCATCCTTaGCAGAAAGAAGTTCTCGTA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRSLLHP*QKEVLV
Trigger: TACGAGAACTTCTTTCTGCCAAGGATGCAAGAGGGA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTCTCCCCTGCTGTTTaGCAGAGTAACCAGATTAGT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLSPAV*QSNQIS
Trigger: ACTAATCTGGTTACTCTGCCAAACAGCAGGGGAGAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTCCCTGATTCGAGGTaGCCTGTATTGACAATGCTC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLFPDSR*PVLTML
Trigger: GAGCATTGTCAATACAGGCCACCTCGAATCAGGGAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGGTAAATGGTGCAGTTaGACGAGCAATCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLGKWCS*TSNPHS
Trigger: AGAATGGGGATTGCTCGTCCAACTGCACCATTTACC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGACTAGCCAGGGTAAATaGTGCAGTTGGACGAGCAAT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLTSQGK*CSWTSN
Trigger: ATTGCTCGTCCAACTGCACCATTTACCCTGGCTAGT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCTTGGGCAGCACCATTaGCATGGGAGCTATTTGTGG +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVLGQHH*HGSYLW
Trigger: CCACAAATAGCTCCCATGCCAATGGTGCTGCCCAAG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCAGAGGCACTTCAAATaGATTTGGGGGTATACACCC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLQRHFK*IWGYTP
Trigger: GGGTGTATACCCCCAAATCCATTTGAAGTGCCTCTG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATAAAGACCCTGACTTaGACGGCCAAAAAGATCCTC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRIKTLT*TAKKIL
Trigger: GAGGATCTTTTTGGCCGTCCAAGTCAGGGTCTTTAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCACTCTCAGTTTCTTCTaGCAGCACGGGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFITLSFF*QHGLFF
Trigger: GAAGAACAGCCCGTGCTGCCAGAAGAAACTGAGAGT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATTGAGGGCATAGGCTaGAATCCTTCTTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLIEGIG*NPSSLA
Trigger: AGCCAGTGAAGAAGGATTCCAGCCTATGCCCTCAAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTAGAAGAAAGGCAGCATaGTTTGGTCCCACCACACAC +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVRRKAA*FGPTTH
Trigger: GTGTGTGGTGGGACCAAATCATGCTGCCTTTCTTCT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTCTGTCTGGCTGTACTaGAAAACCAATCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLSVWLY*KTNPAN
Trigger: GTTTGCAGGATTGGTTTTTCAGTACAGCCAGACAGA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTGCACTGCTGGCAATTaGGGATGCATCACTACACGT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVCTAGN*GCITTR
Trigger: ACGTGTAGTGATGCATCCTCAATTGCCAGCAGTGCA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGGACCAGAGCTGTTCTaGCAGTTAGTATTACTGGAG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIGPELF*QLVLLE
Trigger: CTCCAGTAATACTAACTGTCAGAACAGCTCTGGTCC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATTCCTGTCCAGCAGTaGAAATGGCTACATTCCTCT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLIPVQQ*KWLHSS
Trigger: AGAGGAATGTAGCCATTTTCACTGCTGGACAGGAAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATTGGTGATGTCCGTTTaGGTTTGCAATCATGACCTT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLVMSV*VCNHDL
Trigger: AAGGTCATGATTGCAAACTCAAACGGACATCACCAA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATGATCTGGCATATCTaGATCTTCAGGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLMIWHI*IFRTGC
Trigger: ACAGCCAGTCCTGAAGATTCAGATATGCCAGATCAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTGCCACTTTGCTGATTaGGGTATACTTGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLCHFAD*GILALL
Trigger: CAGAAGAGCAAGTATACCTCAATCAGCAAAGTGGCA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATTGTGCCACTTTGCTaGTTGAGGTATACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRIVPLC*LRYTCS
Trigger: AGAGCAAGTATACCTCAATCAGCAAAGTGGCACAAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTCTTCCACATCTGCTaGAACAATATCATCCTGTTC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLFHIC*NNIILF
Trigger: GAACAGGATGATATTGTTTCAGCAGATGTGGAAGAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGAATGTCATGGAGTCTaGACGTCGGAAAAATGGATG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLECHGV*TSEKWM
Trigger: CATCCATTTTTCCGACGTTCAGACTCCATGACATTC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTCCAACATCTTCCATaGATACCCTGCCGAACAGTT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILQHLP*IPCRTV
Trigger: AACTGTTCGGCAGGGTATTCATGGAAGATGTTGGAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATACAAGAACCTTTGCTaGAACAGTTTCCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRYKNLC*NSFHKG
Trigger: GCCTTTGTGGAAACTGTTTCAGCAAAGGTTCTTGTA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACAAGTTCCATATACATaGTACACAGTTGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRQVPYT*YTVAAN
Trigger: GTTGGCTGCAACTGTGTATCATGTATATGGAACTTG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTGTTGCCTGCCAGCCTaGCTAGAGTCTCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSCCLPA*LESQNL
Trigger: CAGGTTCTGAGACTCTAGGCAGGCTGGCAGGCAACA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCGAATAACTCGAGTCTaGCGGCGGGAATCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSRITRV*RRESRA
Trigger: AGCTCGAGATTCCCGCCGGCAGACTCGAGTTATTCG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGTTTTCACTGGCTCCTaGTTACTTTCAGGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLVFTGS*LLSGLA
Trigger: AGCTAAGCCTGAAAGTAAGCAGGAGCCAGTGAAAAC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCCCTTATTCCTCCCATaGAATCTTTGGCCATTGGGT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIPLFLP*NLWPLG
Trigger: ACCCAATGGCCAAAGATTGCATGGGAGGAATAAGGG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTGGTTAATGTGCTCTaGTCCAGTCCATGTAAAACT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLVNVL*SSPCKT
Trigger: AGTTTTACATGGACTGGAGCAGAGCACATTAACCAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATATCCTGGTTAATGTaGTCTGCTCCAGTCCATGTA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRISWLM*SAPVHV
Trigger: TACATGGACTGGAGCAGAGCACATTAACCAGGATAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTTGGAATACACGCTTaGATTTTCCAATTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLGIHA*IFQLAV
Trigger: CACAGCCAATTGGAAAATGCAAGCGTGTATTCCAAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGTGACTCTGCTACGTTaGACAATTCTTCCACAGCGT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIVTLLR*TILPQR
Trigger: ACGCTGTGGAAGAATTGTGCAACGTAGCAGAGTCAC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCCTGTTCTTCATCTCTaGCCCGAACGGGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSPVLHL*PERAVT
Trigger: AGTCACAGCCCGTTCGGGGCAGAGATGAAGAACAGG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTCCCGTCTTCATCATaGTCATCATGTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILPSSS*SSCCPS
Trigger: AGAGGGACAACATGATGAGCATGATGAAGACGGGAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGTTCTCGCGTCCTTTTaGGTTCTAGTTGAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLVLASF*VLVEVY
Trigger: ATACACCTCAACTAGAACGCAAAAGGACGCGAGAAC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGTCCCTCCGAGAACCTaGTCGCAAACCACTACTCCT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSVPPRT*SQTTTP
Trigger: AGGAGTAGTGGTTTGCGAGCAGGTTCTCGGAGGGAC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCAAGTGCCTGCCGATGTaGTGGCAAAGGCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSKCLPM*WQRLRI
Trigger: GATCCTGAGCCTTTGCCAGCACATCGGCAGGCACTT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATTTTCCCGTCCATGTaGAATAATGAGTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRIFPSM*NNEFHG
Trigger: GCCATGGAACTCATTATTGCACATGGACGGGAAAAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGAAACAATTCAACCTTaGTTCTGTGTTCTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRETIQP*FCVLAR
Trigger: CCTGGCAAGAACACAGAAGCAAGGTTGAATTGTTTC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGACGCGAGGATTAGTTaGCGCAAACTCTCATACATT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLDARIS*RKLSYI
Trigger: AATGTATGAGAGTTTGCGGCAACTAATCCTCGCGTC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAACCAACGCTTGAACTaGAGAAGCTTCTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRNQRLN*RSFSAF
Trigger: AAATGCTGAGAAGCTTCTGCAGTTCAAGCGTTGGTT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCGCTTTCGGTTTTCCTaGTGTACCTTTTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIRFRFS*CTFSEE
Trigger: CTCCTCAGAAAAGGTACAGCAGGAAAACCGAAAGCG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAAAGGCAGCATGATTTaGTCCCACCACACACTGTTT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLKGSMI*SHHTLF
Trigger: AAACAGTGTGTGGTGGGACCAAATCATGCTGCCTTT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTTCCCTGATTCGAGGTaGCCTGTATTGACAATGCTC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIFPDSR*PVLTML
Trigger: GAGCATTGTCAATACAGGCCACCTCGAATCAGGGAA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGGTAAATGGTGCAGTTaGACGAGCAATCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIGKWCS*TSNPHS
Trigger: AGAATGGGGATTGCTCGTCCAACTGCACCATTTACC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGATGCGCCTCTGCTGTaGATTCCTGATGATGTAGGA +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVDAPLL*IPDDVG
Trigger: TCCTACATCATCAGGAATCCACAGCAGAGGCGCATC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATAAAGACCCTGACTTaGACGGCCAAAAAGATCCTC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLIKTLT*TAKKIL
Trigger: GAGGATCTTTTTGGCCGTCCAAGTCAGGGTCTTTAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTACTCTCAGTTTCTTCTaGCAGCACGGGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVTLSFF*QHGLFF
Trigger: GAAGAACAGCCCGTGCTGCCAGAAGAAACTGAGAGT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTGCCTGCCGATGTGCTaGCAAAGGCTCAGGATCATC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSCLPMC*QRLRII
Trigger: GATGATCCTGAGCCTTTGCCAGCACATCGGCAGGCA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCATTGAGGGCATAGGCTaGAATCCTTCTTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIIEGIG*NPSSLA
Trigger: AGCCAGTGAAGAAGGATTCCAGCCTATGCCCTCAAT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGTTGCTGTTCAACTTTaGCCCATCATTATTATCAGG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRVAVQL*PIIIIR
Trigger: CCTGATAATAATGATGGGTCAAAGTTGAACAGCAAC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCCTTTCATTATCAAATaGGGCTCCATCAAGCCACCT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIPFIIK*GSIKPP
Trigger: AGGTGGCTTGATGGAGCCTCATTTGATAATGAAAGG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGTTCTCCTTTACTGCTaGCAGCCAGAAGTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIVLLYC*QPEVQN
Trigger: ATTCTGAACTTCTGGCTGTCAGCAGTAAAGGAGAAC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAATGTTGCTCGTGGATaGTGTAATGAAGGATTCTGG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLNVARG*CNEGFW
Trigger: CCAGAATCCTTCATTACATCATCCACGAGCAACATT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAGTGATGTTCGGCATTaGAGAAATACCAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFISDVRH*RNTSTG
Trigger: TCCAGTGCTGGTATTTCTTCAATGCCGAACATCACT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATCAGGAGATCTAAGTTaGAATCTACAGCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRSGDLS*NLQLSF
Trigger: GAATGACAGCTGTAGATTTCAACTTAGATCTCCTGA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACAACAGGAACATTCTTaGCATCTTCCACAAAAACCA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRQQEHS*HLPQKP
Trigger: TGGTTTTTGTGGAAGATGTCAAGAATGTTCCTGTTG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGTCTTCAGAACAGCATaGACACCTTTGGAATCTACA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLVFRTA*TPLEST
Trigger: TGTAGATTCCAAAGGTGTTCATGCTGTTCTGAAGAC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCACATTCCTCTCATTCTaGCCAAGGAAAGCAATGCTG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFITFLSF*PRKAML
Trigger: CAGCATTGCTTTCCTTGGTCAGAATGAGAGGAATGT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCTGGTGGTCACTGGATaGAGCTCCAGCTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLVVTG*SSSFMS
Trigger: AGACATGAAGCTGGAGCTTCATCCAGTGACCACCAG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTCGGCCACTTACAGCTaGCATAAATGGGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSSATYS*HKWGHP
Trigger: GGGATGACCCCATTTATGTCAGCTGTAAGTGGCCGA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTGGTGATGTCCGTTTaGGTTTGCAATCATGACCTT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLVMSV*VCNHDL
Trigger: AAGGTCATGATTGCAAACTCAAACGGACATCACCAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCATGATCTGGCATATCTaGATCTTCAGGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIMIWHI*IFRTGC
Trigger: ACAGCCAGTCCTGAAGATTCAGATATGCCAGATCAT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGGAGGCTCTAAATCATaGTCTGGCATATCTGAATCT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLGGSKS*SGISES
Trigger: AGATTCAGATATGCCAGATCATGATTTAGAGCCTCC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATTGTGCCACTTTGCTaGTTGAGGTATACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLIVPLC*LRYTCS
Trigger: AGAGCAAGTATACCTCAATCAGCAAAGTGGCACAAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTAACTATAAGGCAATaGGTGAAACAGTCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLTIRQ*VKQSSR
Trigger: TCGGCTGGACTGTTTCACTCATTGCCTTATAGTTAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTCTATGTCGTCACTCTaGCTACTACTGCTATCAGAA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLSMSSL*LLLLSE
Trigger: TTCTGATAGCAGTAGTAGTCAGAGTGACGACATAGA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCATAAATCAAACCCGCTaGACTTGCTGCTGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIINQTR*TCCWCR
Trigger: TCTACACCAGCAGCAAGTTCAGCGGGTTTGATTTAT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTTTTGCGTTCTAGTTaGGGTGTATCCAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLLRSS*GVSNVV
Trigger: GACAACATTGGATACACCTCAACTAGAACGCAAAAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAGACCCAGAAGTTGGTaGCTAGCAAACCAATATAGC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIRPRSW*LANQYS
Trigger: GCTATATTGGTTTGCTAGTCACCAACTTCTGGGTCT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTACAAGAACCTTTGCTaGAACAGTTTCCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLYKNLC*NSFHKG
Trigger: GCCTTTGTGGAAACTGTTTCAGCAAAGGTTCTTGTA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGGATGGACGTCATGGTaGTTTCCTTCTCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSGWTSW*FPSRPP
Trigger: TGGAGGACGAGAAGGAAAGCACCATGACGTCCATCC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCATCACTACACGTGGATaGTGGAGATGGTGGAGGACC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSITTRG*WRWWRT
Trigger: GGTCCTCCACCATCTCCAGCATCCACGTGTAGTGAT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCCCTTATTCCTCCCATaGAATCTTTGGCCATTGGGT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVPLFLP*NLWPLG
Trigger: ACCCAATGGCCAAAGATTGCATGGGAGGAATAAGGG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACAGCGCAGAATGTGTTaGATTAAGGTTTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRQRRMC*IKVCFS
Trigger: AGAGAAACAAACCTTAATGCAACACATTCTGCGCTG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAGCATCTGTAGATTCTaGTCTAAAACAACCGCTTGC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLSICRF*SKTTAC
Trigger: GCAAGCGGTTGTTTTAGAGCAGAATCTACAGATGCT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCACCAGTACCGGTTGCTaGTGTGGTAAGAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSTSTGC*CGKRSH
Trigger: GTGGGATCTCTTACCACAGCAGCAACCGGTACTGGT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTGGTTAATGTGCTCTaGTCCAGTCCATGTAAAACT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLVNVL*SSPCKT
Trigger: AGTTTTACATGGACTGGAGCAGAGCACATTAACCAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTTGGAATACACGCTTaGATTTTCCAATTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLGIHA*IFQLAV
Trigger: CACAGCCAATTGGAAAATGCAAGCGTGTATTCCAAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAATTCTTCACTGCCCTaGATGGCATCTATGCTAGTA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLNSSLP*MASMLV
Trigger: TACTAGCATAGATGCCATGCAGGGCAGTGAAGAATT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTGGCTGATGCGCCTCTaGTGTGGATTCCTGATGATG +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSWLMRL*CGFLMM
Trigger: CATCATCAGGAATCCACAGCAGAGGCGCATCAGCCA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCTCCCGTCTTCATCATaGTCATCATGTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVLPSSS*SSCCPS
Trigger: AGAGGGACAACATGATGAGCATGATGAAGACGGGAG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGTATAAAAACTTCGTaGTACACCACTGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFICIKTS*YTTALS
Trigger: GGAGAGGGCAGTGGTGTAGCACGAAGTTTTTATACA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAAATGCTGGTTGCATTaGTTGTACACGAGGATAAAG +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRKCWLH*LYTRIK
Trigger: CTTTATCCTCGTGTACAAGCAATGCAACCAGCATTT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTTGCAAATGCTGGTTaGATTGCTTGTACACGAGGA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILANAG*IACTRG
Trigger: TCCTCGTGTACAAGCAATGCAACCAGCATTTGCAAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCAGATGCTGGAATAACTaGCTGGGGCTGACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSRCWNN*LGLTAQ
Trigger: TTGGGCAGTCAGCCCCAGCCAGTTATTCCAGCATCT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTTCTTATCCAAGTTTaGCTCTCCTTCCTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILLIQV*LSFLAG
Trigger: ACCAGCAAGGAAGGAGAGCCAAACTTGGATAAGAAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGGATGCTGGAGATGGTaGAGGACCCATTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVGCWRW*RTHFCF
Trigger: AAAACAGAAATGGGTCCTCCACCATCTCCAGCATCC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCACTACACGTGGATGCTaGAGATGGTGGAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSTTRGC*RWWRTH
Trigger: ATGGGTCCTCCACCATCTCCAGCATCCACGTGTAGT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTTTTAGGAGTCCTTTaGAAACAGTCGGGAACCTTC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLFLGVL*KQSGTF
Trigger: GAAGGTTCCCGACTGTTTCCAAAGGACTCCTAAAAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGGCCATTGGGTAGATaGTACCATTTCCATCTCGAA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIWPLGR*YHFHLE
Trigger: TTCGAGATGGAAATGGTACCATCTACCCAATGGCCA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCTCTGTGGAAGGACCTaGAATAGTGGAGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLCGRT*NSGGAW
Trigger: CCAAGCACCTCCACTATTCCAGGTCCTTCCACAGAG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACACTCAAAAATATCCTaGTTAATGTGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRHSKIS*LMCSAP
Trigger: TGGAGCAGAGCACATTAACCAGGATATTTTTGAGTG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTGAATCTTCAGGACTaGCTGTTTTTCGGTTACGAT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLNLQD*LFFGYD
Trigger: ATCGTAACCGAAAAACAGCCAGTCCTGAAGATTCAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCGCTCCAATGCAAGCTaGGCAAATCTTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSRSNAS*ANLGGS
Trigger: AGAGCCTCCAAGATTTGCCCAGCTTGCATTGGAGCG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTCTTCTGGCAAAAGATaGCCTATTCTACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFISSGKR*PILLLA
Trigger: TGCCAGCAGTAGAATAGGCCATCTTTTGCCAGAAGA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGTATACTTGCTCTTCTaGCAAAAGATGGCCTATTCT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRVYLLF*QKMAYS
Trigger: AGAATAGGCCATCTTTTGCCAGAAGAGCAAGTATAC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACCACTAGCATTATCTTaGTTGCTGTGGTTACTTTCA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRPLALS*LLWLLS
Trigger: TGAAAGTAACCACAGCAACCAAGATAATGCTAGTGG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACATGGGAGCTATTTGTaGTTCTTTCTAATGGCTCAT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRHGSYL*FFLMAH
Trigger: ATGAGCCATTAGAAAGAACCACAAATAGCTCCCATG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGCAGCACCATTGGCATaGGAGCTATTTGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVAAPLA*ELFVVL
Trigger: AAGAACCACAAATAGCTCCCATGCCAATGGTGCTGC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCGTCGGAAAAATGGATaGTTTTGGCCAGTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIRRKNG*FWPVSA
Trigger: TGCAGAAACTGGCCAAAACCATCCATTTTTCCGACG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCACCCAAGGAATGTCATaGAGTCTGAACGTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFITQGMS*SLNVGK
Trigger: TTTTCCGACGTTCAGACTCCATGACATTCCTTGGGT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCACTTCAAATGGATTTaGGGGTATACACCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLHFKWI*GYTPKE
Trigger: TTCCTTGGGTGTATACCCCCAAATCCATTTGAAGTG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTGGCTGCAACAGATGTaGCTGATCAGCCAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSWLQQM*LISQGD
Trigger: ATCCCCTTGGCTGATCAGCCACATCTGTTGCAGCCA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTCTGTGTACAGCCATTaGTGTAGTAGCACATCTTCG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFISVYSH*CSSTSS
Trigger: CGAAGATGTGCTACTACACCAATGGCTGTACACAGA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGTTCTTGCCAGGCCTTaGAGTATAAAATCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRVLARP*SIKSSF
Trigger: AAAAGAGGATTTTATACTCCAAGGCCTGGCAAGAAC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGCAGTAGGAAGATGTTaGTCATCTGGTGGTCTTATT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLAVGRC*SSGGLI
Trigger: AATAAGACCACCAGATGACCAACATCTTCCTACTGC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGCTGAGAATATCATGTaGTTCAGTCTTCTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRAENIM*FSLLKE
Trigger: TTCCTTCAGAAGACTGAACCACATGATATTCTCAGC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGAGCCCCAATACAGATaGATTTTGTTCCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLEPQYR*ILFHPY
Trigger: ATAAGGATGGAACAAAATTCATCTGTATTGGGGCTC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGTGTTCCACCAGTTTTaGCAACCTGCAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIVFHQF*QPAIHQ
Trigger: TTGATGAATTGCAGGTTGTCAAAACTGGTGGAACAC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGGTTGGAAAGCAAACTaGTACACAAGCATGCAAAAT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLGWKAN*YTSMQN
Trigger: ATTTTGCATGCTTGTGTATCAGTTTGCTTTCCAACC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCATCAGGGTTGGTACCTaGTGGGCAAACCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSIRVGT*WANHSH
Trigger: ATGGGAATGGTTTGCCCATCAGGTACCAACCCTGAT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTTAACTATAAGGCAATaGGTGAAACAGTCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILTIRQ*VKQSSR
Trigger: TCGGCTGGACTGTTTCACTCATTGCCTTATAGTTAA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTCTATGTCGTCACTCTaGCTACTACTGCTATCAGAA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFISMSSL*LLLLSE
Trigger: TTCTGATAGCAGTAGTAGTCAGAGTGACGACATAGA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTATAAATCAAACCCGCTaGACTTGCTGCTGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVINQTR*TCCWCR
Trigger: TCTACACCAGCAGCAAGTTCAGCGGGTTTGATTTAT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGAATGCTCATCATTATaGGACCGCATTAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIECSSL*DRIRDR
Trigger: TCTGTCTCTAATGCGGTCTCATAATGATGAGCATTC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTTTTGCGTTCTAGTTaGGGTGTATCCAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILLRSS*GVSNVV
Trigger: GACAACATTGGATACACCTCAACTAGAACGCAAAAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCATCTTCGACCAAAGTaGTTGTTAAGCTGCCTCATA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIHLRPK*LLSCLI
Trigger: TATGAGGCAGCTTAACAATCACTTTGGTCGAAGATG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTCAGCATCTGAACTCTaGGACGCGAGGATTAGTTGC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSSASEL*DARISC
Trigger: GCAACTAATCCTCGCGTCTCAGAGTTCAGATGCTGA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATACATTCTGTGGAGTaGCTGGTATATTTACACCAT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRIHSVE*LVYLHH
Trigger: ATGGTGTAAATATACCAGTCACTCCACAGAATGTAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTCAGCATTTTCTCCTaGTTCATCATTGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLSIFS*FIIERG
Trigger: ACCTCTTTCAATGATGAATCAGGAGAAAATGCTGAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCATCTTCTCTACTATTaGCCAGAACCAACGCTTGAA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIHLLYY*PEPTLE
Trigger: TTCAAGCGTTGGTTCTGGTCAATAGTAGAGAAGATG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCCACAAAGGCAGCAGTaGATTTTCAGAACATTTACA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLPQRQQ*IFRTFT
Trigger: TGTAAATGTTCTGAAAATTCACTGCTGCCTTTGTGG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGTTTTCACTGGCTCCTaGTTACTTTCAGGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVVFTGS*LLSGLA
Trigger: AGCTAAGCCTGAAAGTAAGCAGGAGCCAGTGAAAAC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAGCATCTGTAGATTCTaGTCTAAAACAACCGCTTGC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFISICRF*SKTTAC
Trigger: GCAAGCGGTTGTTTTAGAGCAGAATCTACAGATGCT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTGGCTGATGAATGTCTaGAGCATCTGTAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVWLMNV*SICRFC
Trigger: GCAGAATCTACAGATGCTGCAGACATTCATCAGCCA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCACTCTGACTACTACTaGTATCAGAATCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLHSDYY*YQNHLS
Trigger: ACTCAAGTGATTCTGATAGCAGTAGTAGTCAGAGTG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTAAGCCCTGGCTAAACTaGTTGCAGATGTTAGGTAAC +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVKPWLN*LQMLGN
Trigger: GTTACCTAACATCTGCAAGCAGTTTAGCCAGGGCTT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAAAACATATGCCACATaGTTCAATGAGCAAACATCC +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRKTYAT*FNEQTS
Trigger: GGATGTTTGCTCATTGAAGCATGTGGCATATGTTTT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCGGTTCCTTAATCTCTaGATTAAACTTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIRFLNL*IKLVWV
Trigger: CACCCACACAAGTTTAATGCAGAGATTAAGGAACCG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGCCAGTGATTTTACTTaGAAATGCTGGTTGCATTGC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIASDFT*KCWLHC
Trigger: GCAATGCAACCAGCATTTGCAAGTAAAATCACTGGC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGGCCTCATCCACTCTTaGTCTCAGAGAATCCTCACT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSGLIHS*SQRILT
Trigger: AGTGAGGATTCTCTGAGAGCAAGAGTGGATGAGGCC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGAAACAATTCAACCTTaGTTCTGTGTTCTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIETIQP*FCVLAR
Trigger: CCTGGCAAGAACACAGAAGCAAGGTTGAATTGTTTC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAACCAACGCTTGAACTaGAGAAGCTTCTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFINQRLN*RSFSAF
Trigger: AAATGCTGAGAAGCTTCTGCAGTTCAAGCGTTGGTT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATCAATAATGACACTTaGGTGGGCAGAATGAATGTC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLINNDT*VGRMNV
Trigger: GACATTCATTCTGCCCACCCAAGTGTCATTATTGAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTTTTTAGGAGTCCTTTaGAAACAGTCGGGAACCTTC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIFLGVL*KQSGTF
Trigger: GAAGGTTCCCGACTGTTTCCAAAGGACTCCTAAAAA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTGGCCATTGGGTAGATaGTACCATTTCCATCTCGAA +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVWPLGR*YHFHLE
Trigger: TTCGAGATGGAAATGGTACCATCTACCCAATGGCCA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGGATTCTACTACAGATaGCTCTGTGGAAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSGFYYR*LCGRTW
Trigger: CCAGGTCCTTCCACAGAGCCATCTGTAGTAGAATCC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTCGCCTTTCGATCCTTaGATTCTACTACAGATGGCT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVSPFDP*ILLQMA
Trigger: AGCCATCTGTAGTAGAATCCAAGGATCGAAAGGCGA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTCTTCTGGCAAAAGATaGCCTATTCTACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVSSGKR*PILLLA
Trigger: TGCCAGCAGTAGAATAGGCCATCTTTTGCCAGAAGA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCCACTAGCATTATCTTaGTTGCTGTGGTTACTTTCA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLPLALS*LLWLLS
Trigger: TGAAAGTAACCACAGCAACCAAGATAATGCTAGTGG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAAAAATGGATGGTTTTaGCCAGTTTCTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLKNGWF*PVSAGR
Trigger: TCTTCCTGCAGAAACTGGCCAAAACCATCCATTTTT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTCTGTGTACAGCCATTaGTGTAGTAGCACATCTTCG +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVSVYSH*CSSTSS
Trigger: CGAAGATGTGCTACTACACCAATGGCTGTACACAGA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGTGGGTGCCTTTGTTaGCATTTTGGATACACTCTA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFICGCLC*HFGYTL
Trigger: TAGAGTGTATCCAAAATGCCAACAAAGGCACCCACA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTTACTTGCAAATGCTaGTTGCATTGCTTGTACACG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLFTCKC*LHCLYT
Trigger: CGTGTACAAGCAATGCAACCAGCATTTGCAAGTAAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCTTCGACTAGAGCCATaGCGCTTTCGGTTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLRLEP*RFRFSC
Trigger: ACAGGAAAACCGAAAGCGCCATGGCTCTAGTCGAAG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220959.8
CDS-3UTR CCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATTTAGAGGAATAGAGTaGGACGTAAAGTCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRFRGIE*DVKSRN
Trigger: ATTTCTCGACTTTACGTCCCACTCTATTCCTCTAAA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGTTGCTGTTCAACTTTaGCCCATCATTATTATCAGG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIVAVQL*PIIIIR
Trigger: CCTGATAATAATGATGGGTCAAAGTTGAACAGCAAC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGAGCCCCAATACAGATaGATTTTGTTCCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIEPQYR*ILFHPY
Trigger: ATAAGGATGGAACAAAATTCATCTGTATTGGGGCTC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCAACAGGAACATTCTTaGCATCTTCCACAAAAACCA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIQQEHS*HLPQKP
Trigger: TGGTTTTTGTGGAAGATGTCAAGAATGTTCCTGTTG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGGTTGGAAAGCAAACTaGTACACAAGCATGCAAAAT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIGWKAN*YTSMQN
Trigger: ATTTTGCATGCTTGTGTATCAGTTTGCTTTCCAACC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGACAGGAACAATCAGTaGCTCTGCTACGTTGCACAA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSDRNNQ*LCYVAQ
Trigger: TTGTGCAACGTAGCAGAGTCACTGATTGTTCCTGTC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGCTATCAGAATCACTTaGGTCATTCGATTGAGAATC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIAIRIT*VIRLRI
Trigger: GATTCTCAATCGAATGACTCAAGTGATTCTGATAGC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGAATGCTCATCATTATaGGACCGCATTAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVECSSL*DRIRDR
Trigger: TCTGTCTCTAATGCGGTCTCATAATGATGAGCATTC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCAGTATATAAGTGCTTaGAAAACATATGCCACATGC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLQYISA*KTYATC
Trigger: GCATGTGGCATATGTTTTTCAAGCACTTATATACTG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCCCACTACTGGCAGATaGAGAATAAAGACCCTGACT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSPTTGR*RIKTLT
Trigger: AGTCAGGGTCTTTATTCTTCATCTGCCAGTAGTGGG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATACATTCTGTGGAGTaGCTGGTATATTTACACCAT +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLIHSVE*LVYLHH
Trigger: ATGGTGTAAATATACCAGTCACTCCACAGAATGTAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTCAGCATTTTCTCCTaGTTCATCATTGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILSIFS*FIIERG
Trigger: ACCTCTTTCAATGATGAATCAGGAGAAAATGCTGAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAGAAAACATGGCATCTaGATCAATAATGACACTTGG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLRKHGI*INNDTW
Trigger: CCAAGTGTCATTATTGATGCAGATGCCATGTTTTCT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGCTCTTATGCTATTTaGAGACAGGAGGACTATCTT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFICSYAI*RQEDYL
Trigger: AAGATAGTCCTCCTGTCTGCAAATAGCATAAGAGCA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTCTACCCAAACCAGCTaGTCTCAACGAACGTCTCAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSSTQTS*SQRTSH
Trigger: ATGAGACGTTCGTTGAGAGCAGCTGGTTTGGGTAGA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCAAGAATAGTAAGAGGTaGTCTCCCCTGCTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSKNSKR*SPLLFG
Trigger: GCCAAACAGCAGGGGAGAGCACCTCTTACTATTCTT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAAAATAATTCTTCACTaGCCTGCATGGCATCTATGC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIKIILH*PAWHLC
Trigger: GCATAGATGCCATGCAGGGCAGTGAAGAATTATTTT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAAATGCTGGTTGCATTaGTTGTACACGAGGATAAAG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIKCWLH*LYTRIK
Trigger: CTTTATCCTCGTGTACAAGCAATGCAACCAGCATTT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTTACACAGGTCAATTaGAAATGCCAAATCCATTGC +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLFTQVN*KCQIHC
Trigger: GCAATGGATTTGGCATTTGCAATTGACCTGTGTAAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTTGTCGTTCTGTCATaGTCATCTTCTCTACTATTG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILVVLS*SSSLLL
Trigger: CAATAGTAGAGAAGATGAGCATGACAGAACGACAAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATACATGATACACAGTTaGAGCCAACCACAAATTAAA +
Preference number: 4 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRYMIHS*SQPQIK
Trigger: TTTAATTTGTGGTTGGCTGCAACTGTGTATCATGTA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGCAAATAAGATTCGCTaGCTGTATCATCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVANKIR*LYHPHH
Trigger: ATGATGGGGATGATACAGCCAGCGAATCTTATTTGC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCAGCATGAACACCTTTaGAATCTACATTCACTGCTA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIQHEHL*NLHSLL
Trigger: TAGCAGTGAATGTAGATTCCAAAGGTGTTCATGCTG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGTATACTTGCTCTTCTaGCAAAAGATGGCCTATTCT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIVYLLF*QKMAYS
Trigger: AGAATAGGCCATCTTTTGCCAGAAGAGCAAGTATAC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGCAGCACCATTGGCATaGGAGCTATTTGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSAAPLA*ELFVVL
Trigger: AAGAACCACAAATAGCTCCCATGCCAATGGTGCTGC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCAATGCTGTAAGCCCTaGCTAAACTGCTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSQCCKP*LNCLQM
Trigger: CATCTGCAAGCAGTTTAGCCAGGGCTTACAGCATTG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGCAAACATCCAAAACTaGAAGAACATCAGAATGCTC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIANIQN*KNIRML
Trigger: GAGCATTCTGATGTTCTTCCAGTTTTGGATGTTTGC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAAAAATGGATGGTTTTaGCCAGTTTCTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIKNGWF*PVSAGR
Trigger: TCTTCCTGCAGAAACTGGCCAAAACCATCCATTTTT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCCTTTGTTGGCATTTTaGATACACTCTAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIPLLAF*IHSRFG
Trigger: GCCAAATCTAGAGTGTATCCAAAATGCCAACAAAGG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTTTACTTGCAAATGCTaGTTGCATTGCTTGTACACG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIFTCKC*LHCLYT
Trigger: CGTGTACAAGCAATGCAACCAGCATTTGCAAGTAAA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCCTTTCATTATCAAATaGGGCTCCATCAAGCCACCT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSPFIIK*GSIKPP
Trigger: AGGTGGCTTGATGGAGCCTCATTTGATAATGAAAGG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGTTCTCCTTTACTGCTaGCAGCCAGAAGTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSVLLYC*QPEVQN
Trigger: ATTCTGAACTTCTGGCTGTCAGCAGTAAAGGAGAAC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCAATCCCAGCACTAATTaGAAATGCAACTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSNPSTN*KCNCSS
Trigger: GCTGGAGCAGTTGCATTTTCAATTAGTGCTGGGATT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTCAGGAGATCTAAGTTaGAATCTACAGCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVSGDLS*NLQLSF
Trigger: GAATGACAGCTGTAGATTTCAACTTAGATCTCCTGA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGCTATCAGAATCACTTaGGTCATTCGATTGAGAATC +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVAIRIT*VIRLRI
Trigger: GATTCTCAATCGAATGACTCAAGTGATTCTGATAGC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCAGTATATAAGTGCTTaGAAAACATATGCCACATGC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIQYISA*KTYATC
Trigger: GCATGTGGCATATGTTTTTCAAGCACTTATATACTG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGAATGTCATGGAGTCTaGACGTCGGAAAAATGGATG +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSECHGV*TSEKWM
Trigger: CATCCATTTTTCCGACGTTCAGACTCCATGACATTC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTGCCAAATCCATTGCTaGGAAAACAGCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSCQIHC*ENSISI
Trigger: GATGCTGATGCTGTTTTCTCAGCAATGGATTTGGCA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTCAGCATTTGCACATTaGCTTCACCGCAGCCATTTA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSSAFAH*LHRSHL
Trigger: TAAATGGCTGCGGTGAAGTCAATGTGCAAATGCTGA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCAGACCCAGAAGTTGGTaGCTAGCAAACCAATATAGC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSRPRSW*LANQYS
Trigger: GCTATATTGGTTTGCTAGTCACCAACTTCTGGGTCT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCATGGCATTGATGCACTaGTGGCAATTGAGGATGCAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSMALMH*WQLRMH
Trigger: ATGCATCCTCAATTGCCAGCAGTGCATCAATGCCAT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCACTCTGACTACTACTaGTATCAGAATCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVHSDYY*YQNHLS
Trigger: ACTCAAGTGATTCTGATAGCAGTAGTAGTCAGAGTG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCAAGCCCTGGCTAAACTaGTTGCAGATGTTAGGTAAC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSKPWLN*LQMLGN
Trigger: GTTACCTAACATCTGCAAGCAGTTTAGCCAGGGCTT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTGTCTGCTGATTCATTaGCTTAATCCAGTATATAAG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLCLLIH*LNPVYK
Trigger: CTTATATACTGGATTAAGGCAATGAATCAGCAGACA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGTTCTCGCGTCCTTTTaGGTTCTAGTTGAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSVLASF*VLVEVY
Trigger: ATACACCTCAACTAGAACGCAAAAGGACGCGAGAAC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGTTTTGGCCAGTTTCTaGAGGAAGAGAGTCATCATC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSVLASF*RKRVII
Trigger: GATGATGACTCTCTTCCTGCAGAAACTGGCCAAAAC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTTAAACTTGTGTGGGTaGCTTTGTTGGCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVLNLCG*LCWHFG
Trigger: TCCAAAATGCCAACAAAGGCACCCACACAAGTTTAA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTTTACACAGGTCAATTaGAAATGCCAAATCCATTGC +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIFTQVN*KCQIHC
Trigger: GCAATGGATTTGGCATTTGCAATTGACCTGTGTAAA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTATCCTAGAGCTCAATaGAGTCAAACCGCAATAAAA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIYPRAQ*SQTAIK
Trigger: TTTTATTGCGGTTTGACTGCATTGAGCTCTAGGATA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCCTTGTAAAACAACTTaGGCCTGTGAAATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSPCKTT*ACEISS
Trigger: GGAGCTGATTTCACAGGCCCAAGTTGTTTTACAAGG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCTTCTTATCCAAGTTTaGCTCTCCTTCCTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLLIQV*LSFLAG
Trigger: ACCAGCAAGGAAGGAGAGCCAAACTTGGATAAGAAG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTCGCCTTTCGATCCTTaGATTCTACTACAGATGGCT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSSPFDP*ILLQMA
Trigger: AGCCATCTGTAGTAGAATCCAAGGATCGAAAGGCGA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTCCCTCTTGCATCCTTaGCAGAAAGAAGTTCTCGTA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSSLLHP*QKEVLV
Trigger: TACGAGAACTTCTTTCTGCCAAGGATGCAAGAGGGA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCACCCAAGGAATGTCATaGAGTCTGAACGTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSTQGMS*SLNVGK
Trigger: TTTTCCGACGTTCAGACTCCATGACATTCCTTGGGT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAAAATGCTTGTGCAATaGCTGTATAAAAACTTCGTG +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLKMLVQ*LYKNFV
Trigger: CACGAAGTTTTTATACAGCCATTGCACAAGCATTTT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCCTTTGTTGGCATTTTaGATACACTCTAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVPLLAF*IHSRFG
Trigger: GCCAAATCTAGAGTGTATCCAAAATGCCAACAAAGG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCATTCTGTGGAGTGACTaGTATATTTACACCATTAGG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIILWSD*YIYTIR
Trigger: CCTAATGGTGTAAATATACCAGTCACTCCACAGAAT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTTTAGAGGAATAGAGTaGGACGTAAAGTCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIFRGIE*DVKSRN
Trigger: ATTTCTCGACTTTACGTCCCACTCTATTCCTCTAAA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAAAAGTATTGTGCATTaGCCCCATCATATGTACAAA +
Preference number: 4 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLKSIVH*PHHMYK
Trigger: TTTGTACATATGATGGGGCCAATGCACAATACTTTT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGTCTTCAGAACAGCATaGACACCTTTGGAATCTACA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSVFRTA*TPLEST
Trigger: TGTAGATTCCAAAGGTGTTCATGCTGTTCTGAAGAC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGCTTTTGCAATTTTCTaGGCAGTTTCTAAGATGGTA +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVAFAIF*AVSKMV
Trigger: TACCATCTTAGAAACTGCTCAGAAAATTGCAAAAGC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGGAGGCTCTAAATCATaGTCTGGCATATCTGAATCT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSGGSKS*SGISES
Trigger: AGATTCAGATATGCCAGATCATGATTTAGAGCCTCC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCTCTTCCACATCTGCTaGAACAATATCATCCTGTTC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLFHIC*NNIILF
Trigger: GAACAGGATGATATTGTTTCAGCAGATGTGGAAGAG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCTTGAGTCATTCGATTaGGAATCATCTTCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVLESFD*ESSSEK
Trigger: CTTTTCTGAAGATGATTCTCAATCGAATGACTCAAG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCATCTTCTCTACTATTaGCCAGAACCAACGCTTGAA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSHLLYY*PEPTLE
Trigger: TTCAAGCGTTGGTTCTGGTCAATAGTAGAGAAGATG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCAAGTTCCATATACATaGTACACAGTTGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSQVPYT*YTVAAN
Trigger: GTTGGCTGCAACTGTGTATCATGTATATGGAACTTG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTTATCAGGCCACCACTaGAAATCTTCTCCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLSGHH*KSSPRD
Trigger: ATCTCTAGGAGAAGATTTGCAGTGGTGGCCTGATAA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCATATCCTGGTTAATGTaGTCTGCTCCAGTCCATGTA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSISWLM*SAPVHV
Trigger: TACATGGACTGGAGCAGAGCACATTAACCAGGATAT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCAATTCTTCACTGCCCTaGATGGCATCTATGCTAGTA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSNSSLP*MASMLV
Trigger: TACTAGCATAGATGCCATGCAGGGCAGTGAAGAATT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGTCTGCTGATTCATTaGCTTAATCCAGTATATAAG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFICLLIH*LNPVYK
Trigger: CTTATATACTGGATTAAGGCAATGAATCAGCAGACA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCGGTTCCTTAATCTCTaGATTAAACTTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSRFLNL*IKLVWV
Trigger: CACCCACACAAGTTTAATGCAGAGATTAAGGAACCG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCATTTTCCCGTCCATGTaGAATAATGAGTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSIFPSM*NNEFHG
Trigger: GCCATGGAACTCATTATTGCACATGGACGGGAAAAT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGTGATAAAAGTATTGTaGATTGGCCCCATCATATGT +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVVIKVL*IGPIIC
Trigger: ACATATGATGGGGCCAATGCACAATACTTTTATCAC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGCAAATAAGATTCGCTaGCTGTATCATCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSANKIR*LYHPHH
Trigger: ATGATGGGGATGATACAGCCAGCGAATCTTATTTGC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTTTCTCAAGCATACCTaGGTACCAACAGTGATGTTC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSFLKHT*VPTVMF
Trigger: GAACATCACTGTTGGTACCCAGGTATGCTTGAGAAA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCATTACTGGAGGTTCCTaGAAATTTTACAGCAACATA +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIITGGS*KFYSNI
Trigger: TATGTTGCTGTAAAATTTCCAGGAACCTCCAGTAAT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCTGAATCTTCAGGACTaGCTGTTTTTCGGTTACGAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLNLQD*LFFGYD
Trigger: ATCGTAACCGAAAAACAGCCAGTCCTGAAGATTCAG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTTATCTTGGTTGCTGTaGTTACTTTCACTATCACTT +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILSWLL*LLSLSL
Trigger: AAGTGATAGTGAAAGTAACCACAGCAACCAAGATAA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAAAATGCTTGTGCAATaGCTGTATAAAAACTTCGTG +
Preference number: 4 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIKMLVQ*LYKNFV
Trigger: CACGAAGTTTTTATACAGCCATTGCACAAGCATTTT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTGTGGGTGCCTTTGTTaGCATTTTGGATACACTCTA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSCGCLC*HFGYTL
Trigger: TAGAGTGTATCCAAAATGCCAACAAAGGCACCCACA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTATTCTGTGGAGTGACTaGTATATTTACACCATTAGG +
Preference number: 4 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVILWSD*YIYTIR
Trigger: CCTAATGGTGTAAATATACCAGTCACTCCACAGAAT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGCAGTAGGAAGATGTTaGTCATCTGGTGGTCTTATT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSAVGRC*SSGGLI
Trigger: AATAAGACCACCAGATGACCAACATCTTCCTACTGC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCCACAAAGGCAGCAGTaGATTTTCAGAACATTTACA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSPQRQQ*IFRTFT
Trigger: TGTAAATGTTCTGAAAATTCACTGCTGCCTTTGTGG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTGCTCTTATGCTATTTaGAGACAGGAGGACTATCTT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSCSYAI*RQEDYL
Trigger: AAGATAGTCCTCCTGTCTGCAAATAGCATAAGAGCA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGGGTCTTTATTCTCCTaGGACCCAAACATAATCATA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSGSLFS*DPNIII
Trigger: TATGATTATGTTTGGGTCGCAGGAGAATAAAGACCC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGACAAATCTCTTGACTaGTGGTTTCTCAGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSDKSLD*WFLSFS
Trigger: GGAAAAACTGAGAAACCAGCAGTCAAGAGATTTGTC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTTAAACTTGTGTGGGTaGCTTTGTTGGCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLNLCG*LCWHFG
Trigger: TCCAAAATGCCAACAAAGGCACCCACACAAGTTTAA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCTTGTCGTTCTGTCATaGTCATCTTCTCTACTATTG +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLVVLS*SSSLLL
Trigger: CAATAGTAGAGAAGATGAGCATGACAGAACGACAAG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCACTCAAAAATATCCTaGTTAATGTGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSHSKIS*LMCSAP
Trigger: TGGAGCAGAGCACATTAACCAGGATATTTTTGAGTG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCATGGGAGCTATTTGTaGTTCTTTCTAATGGCTCAT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSHGSYL*FFLMAH
Trigger: ATGAGCCATTAGAAAGAACCACAAATAGCTCCCATG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGCAAACATCCAAAACTaGAAGAACATCAGAATGCTC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSANIQN*KNIRML
Trigger: GAGCATTCTGATGTTCTTCCAGTTTTGGATGTTTGC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCAGAGATACTGGACTTTaGACAGGTGTATTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSRDTGL*TGVFFL
Trigger: TAAGAAGAATACACCTGTTCAAAGTCCAGTATCTCT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGCTTTTGCAATTTTCTaGGCAGTTTCTAAGATGGTA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSAFAIF*AVSKMV
Trigger: TACCATCTTAGAAACTGCTCAGAAAATTGCAAAAGC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCTTGAGTCATTCGATTaGGAATCATCTTCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLESFD*ESSSEK
Trigger: CTTTTCTGAAGATGATTCTCAATCGAATGACTCAAG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR TCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCAGACTGACTGCTCATTaGAATAGGGATACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSRLTAH*NRDTKK
Trigger: TTTCTTTGTATCCCTATTTCAATGAGCAGTCAGTCT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTTTATGACAAACCCTTaGACATTCCGTACAACAACA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSFMTNP*TFRTTT
Trigger: TGTTGTTGTACGGAATGTGCAAGGGTTTGTCATAAA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCAAAACATATGCCACATaGTTCAATGAGCAAACATCC +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSKTYAT*FNEQTS
Trigger: GGATGTTTGCTCATTGAAGCATGTGGCATATGTTTT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
3UTR CAA 72 bp TCCTACAAAGGAACTGAAAGGAGAGATTCCAGAGAATaGCTCTCCTCATTTTTAATATGTAAAGTGACTGTT +
Preference number: 4 (lower is better)
Translates to: SYKGTERRDSRE*LSSFLICKVTV
Trigger: AACAGTCACTTTACATATTAAAAATGAGGAGAGCAATTCTCTGGAATCTCTCCTTTCAGTTCCTTTGTAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR GCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCCAGTTTTGACAACCTaGAATTCATCAATTCTAAGT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSPVLTT*NSSILS
Trigger: ACTTAGAATTGATGAATTGCAGGTTGTCAAAACTGG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCATTACTGGAGGTTCCTaGAAATTTTACAGCAACATA +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSITGGS*KFYSNI
Trigger: TATGTTGCTGTAAAATTTCCAGGAACCTCCAGTAAT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CCA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTTATCTTGGTTGCTGTaGTTACTTTCACTATCACTT +
Preference number: 4 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLSWLL*LLSLSL
Trigger: AAGTGATAGTGAAAGTAACCACAGCAACCAAGATAA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS GCA 90 bp CCCAAATGGAGGGAAGCAAATACGCAGGGGCCGCCGCCGCCTCCCTaGCGGGCGTGTGTCCGCGGCCCGGAGGGGCGGGCAGGAGGGCGA +
Preference number: 5 (lower is better)
Translates to: PKWREANTQGPPPPP*RACVRGPEGRAGGR
Trigger: TCGCCCTCCTGCCCGCCCCTCCGGGCCGCGGACACACGCCCGGCAGGGAGGCGGCGGCGGCCCCTGCGTATTTGCTTCCCTCCATTTGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 90 bp CACCGCGCGTCACTAGCGAGAAGCTGCCGCCGCCATCTTCACTTCTaGCCCAGTTTCTCCGTCTCGCAGGCTCCGCTCCGGAGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: HRASLARSCRRHLHF*PSFSVSQAPLRSGG
Trigger: CCCGCCGCTCCGGAGCGGAGCCTGCGAGACGGAGAAACTGGGGCAGAAGTGAAGATGGCGGCGGCAGCTTCTCGCTAGTGACGCGCGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521922.5
CDS GCA 90 bp CGGTGCCCGGCAGCGGGTGAACCACGAAATGGATGGACGTCATGGTaGTTTCCTTCTCGTCCTCCACTCGAGGGCGGCCCCCTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: RCPAAGEPRNGWTSW*FPSRPPLEGGPLPL
Trigger: GAGCGGGAGGGGGCCGCCCTCGAGTGGAGGACGAGAAGGAAAGCACCATGACGTCCATCCATTTCGTGGTTCACCCGCTGCCGGGCACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 90 bp GAGGGGAAGGAGATGAGCCCGCACCGCGCGTCACTAGCGAGAAGCTaGCGCCGCCATCTTCACTTCTGCCCCAGTTTCTCCGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: EGKEMSPHRASLARS*RRHLHFCPSFSVSQ
Trigger: CTGCGAGACGGAGAAACTGGGGCAGAAGTGAAGATGGCGGCGGCAGCTTCTCGCTAGTGACGCGCGGTGCGGGCTCATCTCCTTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521922.5
CDS TCA 90 bp GCTGCTGGTGTAGATGTACTGGAAGGGGCTGTACTGGCTGCTCGCTaGTGCTGGGTGTTGCGGACAGCCCACTGCATTGAACGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: AAGVDVLEGAVLAAR*CWVLRTAHCIERGA
Trigger: AGCTCCCCGTTCAATGCAGTGGGCTGTCCGCAACACCCAGCATCAGCGAGCAGCCAGTACAGCCCCTTCCAGTACATCTACACCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 90 bp ACTGGCTGCTCGCTGATGCTGGGTGTTGCGGACAGCCCACTGCATTaGACGGGGAGCTTGGGCAGCACCATTGGCATGGGAGCTATTTGT +
Preference number: 5 (lower is better)
Translates to: TGCSLMLGVADSPLH*TGSLGSTIGMGAIC
Trigger: ACAAATAGCTCCCATGCCAATGGTGCTGCCCAAGCTCCCCGTTCAATGCAGTGGGCTGTCCGCAACACCCAGCATCAGCGAGCAGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 90 bp TCTCGTAACCTGTCATTGAGCTGGTCCTCGGTGCCCGGCAGCGGGTaGACCACGAAATGGATGGACGTCATGGTGCTTTCCTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: SRNLSLSWSSVPGSG*TTKWMDVMVLSFSS
Trigger: GGACGAGAAGGAAAGCACCATGACGTCCATCCATTTCGTGGTTCACCCGCTGCCGGGCACCGAGGACCAGCTCAATGACAGGTTACGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 90 bp AAAAGCCCAGACCCTCGATCCCGTCCTGTCCGAATAACTCGAGTCTaGCGGCGGGAATCTCGAGCTCCAGCTGATGACCTACCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: KSPDPRSRPVRITRV*RRESRAPADDLPED
Trigger: ATCCTCTGGTAGGTCATCAGCTGGAGCTCGAGATTCCCGCCGGCAGACTCGAGTTATTCGGACAGGACGGGATCGAGGGTCTGGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 90 bp AGGACCTGGAATAGTGGAGGTGCTTGGTCCTTGACCAGTACCGGTTaGTGCTGTGGTAAGAGATCCCACAGCGGGGGCCAGGATAAAATC +
Preference number: 5 (lower is better)
Translates to: RTWNSGGAWSLTSTG*CCGKRSHSGGQDKI
Trigger: GATTTTATCCTGGCCCCCGCTGTGGGATCTCTTACCACAGCAGCAACCGGTACTGGTCAAGGACCAAGCACCTCCACTATTCCAGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000520898.5
ENST00000521922.5
CDS GCA 90 bp TGCTTGTACACGAGGATAAAGCCTCTCTCCAAGTGCCTGCCGATGTaGTGGCAAAGGCTCAGGATCATCGCTAGGATTCCCTTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: CLYTRIKPLSKCLPM*WQRLRIIARIPFRG
Trigger: GCCTCTGAAGGGAATCCTAGCGATGATCCTGAGCCTTTGCCAGCACATCGGCAGGCACTTGGAGAGAGGCTTTATCCTCGTGTACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS GCA 90 bp ACCTGGAATAGTGGAGGTGCTTGGTCCTTGACCAGTACCGGTTGCTaGTGTGGTAAGAGATCCCACAGCGGGGGCCAGGATAAAATCAAT +
Preference number: 5 (lower is better)
Translates to: TWNSGGAWSLTSTGC*CGKRSHSGGQDKIN
Trigger: ATTGATTTTATCCTGGCCCCCGCTGTGGGATCTCTTACCACAGCAGCAACCGGTACTGGTCAAGGACCAAGCACCTCCACTATTCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000520898.5
ENST00000521922.5
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATTGTCCTACCAGGCCTaGACGTCCTCCCTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLSYQA*TSSLPP
Trigger: CGGGGGCAGGGAGGACGTCAAGGCCTGGTAGGACAA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS GCA 90 bp TGCTGGTTGCATTGCTTGTACACGAGGATAAAGCCTCTCTCCAAGTaGCTGCCGATGTGCTGGCAAAGGCTCAGGATCATCGCTAGGATT +
Preference number: 5 (lower is better)
Translates to: CWLHCLYTRIKPLSK*LPMCWQRLRIIARI
Trigger: AATCCTAGCGATGATCCTGAGCCTTTGCCAGCACATCGGCAGGCACTTGGAGAGAGGCTTTATCCTCGTGTACAAGCAATGCAACCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTGTCCTACCAGGCCTaGACGTCCTCCCTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLSYQA*TSSLPP
Trigger: CGGGGGCAGGGAGGACGTCAAGGCCTGGTAGGACAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATCTCGTAACCTGTCATaGAGCTGGTCCTCGGTGCCC +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRSRNLS*SWSSVP
Trigger: GGGCACCGAGGACCAGCTCAATGACAGGTTACGAGA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS TCA 90 bp GCTGTTTTTCGGTTACGATCTTCCCTGATTCGAGGTGGCCTGTATTaGCAATGCTCCACCGTCTGCCTTGCGACTGTCTGTACTAAGAAT +
Preference number: 5 (lower is better)
Translates to: AVFRLRSSLIRGGLY*QCSTVCLATVCTKN
Trigger: ATTCTTAGTACAGACAGTCGCAAGGCAGACGGTGGAGCATTGTCAATACAGGCCACCTCGAATCAGGGAAGATCGTAACCGAAAAACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 90 bp TATCTGAATCTTCAGGACTGGCTGTTTTTCGGTTACGATCTTCCCTaGTTCGAGGTGGCCTGTATTGACAATGCTCCACCGTCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: YLNLQDWLFFGYDLP*FEVACIDNAPPSAL
Trigger: CAAGGCAGACGGTGGAGCATTGTCAATACAGGCCACCTCGAATCAGGGAAGATCGTAACCGAAAAACAGCCAGTCCTGAAGATTCAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTCCCTGCCCCCGAGTaGCTGTTCAACTTTGACCCA +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLPAPE*LFNFDP
Trigger: TGGGTCAAAGTTGAACAGCAACTCGGGGGCAGGGAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGACCATGGAGAGTCGCTaGTCCTACCAGGCCTTGACG +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLTMESR*SYQALT
Trigger: CGTCAAGGCCTGGTAGGACAAGCGACTCTCCATGGT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGGAGGTGCTTGGTCCTaGACCAGTACCGGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIGGAWS*TSTGCC
Trigger: GCAGCAACCGGTACTGGTCAAGGACCAAGCACCTCC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAGGCAGGAACACTGCTaGCTCCTGCTTCTGAACCAG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRRQEHC*LLLLNQ
Trigger: CTGGTTCAGAAGCAGGAGCAAGCAGTGTTCCTGCCT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGCTTGGGCAGCACCATaGGCATGGGAGCTATTTGTG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRAWAAP*AWELFV
Trigger: CACAAATAGCTCCCATGCCAATGGTGCTGCCCAAGC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS GCA 90 bp GGTCGTGGTGGTAGTGGTTCCACTGAAAATAATTCTTCACTGCCCTaGATGGCATCTATGCTAGTACTAGCCAGGGTAAATGGTGCAGTT +
Preference number: 5 (lower is better)
Translates to: GRGGSGSTENNSSLP*MASMLVLARVNGAV
Trigger: AACTGCACCATTTACCCTGGCTAGTACTAGCATAGATGCCATGCAGGGCAGTGAAGAATTATTTTCAGTGGAACCACTACCACCACGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 90 bp CTCCATATCACTCCCGTCTTCATCATGCTCATCATGTTGTCCCTCTaGCTCAGCATTTTCTTCCCCGTGTTCTTCCTGTTCATCATGATG +
Preference number: 5 (lower is better)
Translates to: LHITPVFIMLIMLSL*LSIFFPVFFLFIMM
Trigger: CATCATGATGAACAGGAAGAACACGGGGAAGAAAATGCTGAGGCAGAGGGACAACATGATGAGCATGATGAAGACGGGAGTGATATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000519528.1
ENST00000520539.6
ENST00000521922.5
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACCTTTTCCTCTTCTTTaGGTGCAGGGGTTGACCGTC +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRPFPLL*VQGLTV
Trigger: GACGGTCAACCCCTGCACCAAAAGAAGAGGAAAAGG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGGAGAGTCATCAGGGTaGGTACCTGATGGGCAAACC +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLGESSG*VPDGQT
Trigger: GGTTTGCCCATCAGGTACCAACCCTGATGACTCTCC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGCTCCACCGTCTGCCTaGCGACTGTCTGTACTAAGA +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLAPPSA*RLSVLR
Trigger: TCTTAGTACAGACAGTCGCAAGGCAGACGGTGGAGC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATGCAGACATCATTCCTaGACGGGCGCTAAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRCRHHS*TGAKQG
Trigger: ACCTTGCTTAGCGCCCGTCAAGGAATGATGTCTGCA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATGGCCTCATCCACTCTaGCTCTCAGAGAATCCTCAC +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRWPHPL*LSENPH
Trigger: GTGAGGATTCTCTGAGAGCAAGAGTGGATGAGGCCA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS TCA 90 bp TCCTGCAGGAGAGAAGAAGGGTCAGCATCTGGACCAGAGCTGTTCTaGCAGTTAGTATTACTGGAGGTTCCTGGAAATTTTACAGCAACA +
Preference number: 5 (lower is better)
Translates to: SCRREEGSASGPELF*QLVLLEVPGNFTAT
Trigger: TGTTGCTGTAAAATTTCCAGGAACCTCCAGTAATACTAACTGTCAGAACAGCTCTGGTCCAGATGCTGACCCTTCTTCTCTCCTGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 90 bp CCAATTCAGTTAGGATTGATCCAGGTTCTGCTCCAACATCTTCCATaGATACCCTGCCGAACAGTTCTAAAGAAAGGCGCCAACGTCCTA +
Preference number: 5 (lower is better)
Translates to: PIQLGLIQVLLQHLP*IPCRTVLKKGANVL
Trigger: TAGGACGTTGGCGCCTTTCTTTAGAACTGTTCGGCAGGGTATTCATGGAAGATGTTGGAGCAGAACCTGGATCAATCCTAACTGAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521566.1
ENST00000521922.5
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTCTCGTAACCTGTCATaGAGCTGGTCCTCGGTGCCC +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVSRNLS*SWSSVP
Trigger: GGGCACCGAGGACCAGCTCAATGACAGGTTACGAGA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCTCCCTGCCCCCGAGTaGCTGTTCAACTTTGACCCA +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVLPAPE*LFNFDP
Trigger: TGGGTCAAAGTTGAACAGCAACTCGGGGGCAGGGAG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTACCATGGAGAGTCGCTaGTCCTACCAGGCCTTGACG +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVTMESR*SYQALT
Trigger: CGTCAAGGCCTGGTAGGACAAGCGACTCTCCATGGT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATTTGGCTCTCCTTCCTaGCTGGTAGAACCCCTTTCA +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRFGSPS*LVEPLS
Trigger: TGAAAGGGGTTCTACCAGCAAGGAAGGAGAGCCAAA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATGCACTGCTGGCAATaGAGGATGCATCACTACACG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRMHCWQ*RMHHYT
Trigger: CGTGTAGTGATGCATCCTCAATTGCCAGCAGTGCAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTTTTGGTGCAGGGGTaGACCGTCGTCGTTTGTATG +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLLVQG*TVVVCM
Trigger: CATACAAACGACGACGGTCAACCCCTGCACCAAAAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATGGGGTCATCCCTCTaGCATCCTTGGCAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRMGSSL*HPWQKE
Trigger: TTCTTTCTGCCAAGGATGCAAGAGGGATGACCCCAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGGAGAGTCATCAGGGTaGGTACCTGATGGGCAAACC +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIGESSG*VPDGQT
Trigger: GGTTTGCCCATCAGGTACCAACCCTGATGACTCTCC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTCGAGGTGGCCTGTATaGACAATGCTCCACCGTCTG +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFISRWPV*TMLHRL
Trigger: CAGACGGTGGAGCATTGTCAATACAGGCCACCTCGA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGTTCTGCTGTCATCTTaGGCTGGGGTTAGACCCAGA +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLVLLSS*AGVRPR
Trigger: TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAAC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS TCA 90 bp GAAAACATGGCATCTGCATCAATAATGACACTTGGGTGGGCAGAATaGATGTCGGCATCAAGGAGAGACATAAGATCCTCTCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: ENMASASIMTLGWAE*MSASRRDIRSSPGK
Trigger: TTTGCCTGGAGAGGATCTTATGTCTCTCCTTGATGCCGACATTCATTCTGCCCACCCAAGTGTCATTATTGATGCAGATGCCATGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTTGGCTCTCCTTCCTaGCTGGTAGAACCCCTTTCA +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLFGSPS*LVEPLS
Trigger: TGAAAGGGGTTCTACCAGCAAGGAAGGAGAGCCAAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATCTTCTTATCCAAGTTaGGCTCTCCTTCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRSSYPS*ALLPCW
Trigger: CCAGCAAGGAAGGAGAGCCAAACTTGGATAAGAAGA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATGCACTGCTGGCAATaGAGGATGCATCACTACACG +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLMHCWQ*RMHHYT
Trigger: CGTGTAGTGATGCATCCTCAATTGCCAGCAGTGCAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGTCGTTTGTATGGCATaGATGCACTGCTGGCAATTG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRVVCMA*MHCWQL
Trigger: CAATTGCCAGCAGTGCATCAATGCCATACAAACGAC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTTTTGGTGCAGGGGTaGACCGTCGTCGTTTGTATG +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILLVQG*TVVVCM
Trigger: CATACAAACGACGACGGTCAACCCCTGCACCAAAAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATCAAACTTCGGCTACTaGATGATCCAGCCCGATTAC +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRSNFGY*MIQPDY
Trigger: GTAATCGGGCTGGATCATCAAGTAGCCGAAGTTTGA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGGAGGTGCTTGGTCCTaGACCAGTACCGGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSGGAWS*TSTGCC
Trigger: GCAGCAACCGGTACTGGTCAAGGACCAAGCACCTCC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATTCGCCTTTCGATCCTaGGATTCTACTACAGATGGC +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRFAFRS*DSTTDG
Trigger: GCCATCTGTAGTAGAATCCAAGGATCGAAAGGCGAA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATCCCTCTTGCATCCTaGGCAGAAAGAAGTTCTCGT +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRIPLAS*AERSSR
Trigger: ACGAGAACTTCTTTCTGCCAAGGATGCAAGAGGGAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTCGAGGTGGCCTGTATaGACAATGCTCCACCGTCTG +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVSRWPV*TMLHRL
Trigger: CAGACGGTGGAGCATTGTCAATACAGGCCACCTCGA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAATCATGCTCATCATGTaGTCCCTCTGCCTCAGCATT +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRIMLIM*SLCLSI
Trigger: AATGCTGAGGCAGAGGGACAACATGATGAGCATGAT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGCAGACATCATTCCTaGACGGGCGCTAAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFICRHHS*TGAKQG
Trigger: ACCTTGCTTAGCGCCCGTCAAGGAATGATGTCTGCA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATGCTGGTTGCATTGCTaGTACACGAGGATAAAGCCT +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRCWLHC*YTRIKP
Trigger: AGGCTTTATCCTCGTGTACAAGCAATGCAACCAGCA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGACCAGAACCAACGCTaGAACTGCAGAAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLDQNQR*NCRSFS
Trigger: TGAGAAGCTTCTGCAGTTCAAGCGTTGGTTCTGGTC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS TCA 90 bp AATGCCAAATCCATTGCTGAGAAAACAGCATCAGCATCTGAACTCTaGGACGCGAGGATTAGTTGCCGCAAACTCTCATACATTACAGGA +
Preference number: 5 (lower is better)
Translates to: NAKSIAEKTASASEL*DARISCRKLSYITG
Trigger: TCCTGTAATGTATGAGAGTTTGCGGCAACTAATCCTCGCGTCTCAGAGTTCAGATGCTGATGCTGTTTTCTCAGCAATGGATTTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS TCA 90 bp TTGTGCTTTAAATTCCACTCCCCAGTCGAAAGAGCACTCCAGAAATaGGAAAAACATGACGGTGATCCACCAACCTCCAGGCAAATAAGA +
Preference number: 5 (lower is better)
Translates to: LCFKFHSPVERALQK*EKHDGDPPTSRQIR
Trigger: TCTTATTTGCCTGGAGGTTGGTGGATCACCGTCATGTTTTTCTCATTTCTGGAGTGCTCTTTCGACTGGGGAGTGGAATTTAAAGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518145.1
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGAAAGGCAGCATGATTaGGTCCCACCACACACTGTT +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIERQHD*VPPHTV
Trigger: AACAGTGTGTGGTGGGACCAAATCATGCTGCCTTTC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAACTATCCGCTCTCCTaGAAGTTCAGAGTAAGTCTG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRNYPLS*KFRVSL
Trigger: CAGACTTACTCTGAACTTCAAGGAGAGCGGATAGTT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGTCGTTTGTATGGCATaGATGCACTGCTGGCAATTG +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLVVCMA*MHCWQL
Trigger: CAATTGCCAGCAGTGCATCAATGCCATACAAACGAC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGTTGACCGTCGTCGTTaGTATGGCATTGATGCACTG +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIVDRRR*YGIDAL
Trigger: CAGTGCATCAATGCCATACAAACGACGACGGTCAAC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATGCAATCTTTGGCCATaGGGTAGATGGTACCATTTC +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRCNLWP*GRWYHF
Trigger: GAAATGGTACCATCTACCCAATGGCCAAAGATTGCA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACAACTGATATTGCATTaGCAATGGCCTCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRQLILH*QWPQQQ
Trigger: CTGCTGTTGAGGCCATTGCAAATGCAATATCAGTTG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTCGCCTTTCGATCCTaGGATTCTACTACAGATGGC +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLFAFRS*DSTTDG
Trigger: GCCATCTGTAGTAGAATCCAAGGATCGAAAGGCGAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCATGGGGTCATCCCTCTaGCATCCTTGGCAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIMGSSL*HPWQKE
Trigger: TTCTTTCTGCCAAGGATGCAAGAGGGATGACCCCAT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACCGAATTGTGCCACTTaGCTGATTGAGGTATACTTG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRPNCAT*LIEVYL
Trigger: CAAGTATACCTCAATCAGCAAAGTGGCACAATTCGG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAGCTTGGAATACACGCTaGCATTTTCCAATTGGCTGT +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRAWNTR*HFPIGC
Trigger: ACAGCCAATTGGAAAATGCAAGCGTGTATTCCAAGC...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACCCACTAGCATTATCTaGGTTGCTGTGGTTACTTTC +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRPTSII*VAVVTF
Trigger: GAAAGTAACCACAGCAACCAAGATAATGCTAGTGGG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCCCTGGCTAAACTGCTaGCAGATGTTAGGTAACTGC +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIPWLNC*QMLGNC
Trigger: GCAGTTACCTAACATCTGCAAGCAGTTTAGCCAGGG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAATAAAGACCCTGACTaGGACGGCCAAAAAGATCCT +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRNKDPD*DGQKDP
Trigger: AGGATCTTTTTGGCCGTCCAAGTCAGGGTCTTTATT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGTGTGGGTGCCTTTGTaGGCATTTTGGATACACTCT +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLVWVPL*AFWIHS
Trigger: AGAGTGTATCCAAAATGCCAACAAAGGCACCCACAC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTGCTGGTTGCATTGCTaGTACACGAGGATAAAGCCT +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLCWLHC*YTRIKP
Trigger: AGGCTTTATCCTCGTGTACAAGCAATGCAACCAGCA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGTAGACCTTTCCTCATaGCATGTAAGGGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLVDLSS*HVRAVL
Trigger: CAGAACAGCCCTTACATGCAATGAGGAAAGGTCTAC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTGGCAGTGATGGGCTaGATGTCCAAAAGTAAACAA +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLAVMG*MSKSKQ
Trigger: TTGTTTACTTTTGGACATCAAGCCCATCACTGCCAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGTTCTGCTGTCATCTTaGGCTGGGGTTAGACCCAGA +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVVLLSS*AGVRPR
Trigger: TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAAC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS TCA 90 bp TTATCAGGCCACCACTGCAAATCTTCTCCTAGAGATACTGGACTTTaGACAGGTGTATTCTTCTTATCCAAGTTTGGCTCTCCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LSGHHCKSSPRDTGL*TGVFFLSKFGSPSL
Trigger: CAAGGAAGGAGAGCCAAACTTGGATAAGAAGAATACACCTGTTCAAAGTCCAGTATCTCTAGGAGAAGATTTGCAGTGGTGGCCTGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 90 bp ATGACCTTTATGACAAACCCTTGCACATTCCGTACAACAACACAGTaGCTCCAGCAAGCCACAAGTTCGACACTCAAAAATATCCTGGTT +
Preference number: 5 (lower is better)
Translates to: MTFMTNPCTFRTTTQ*LQQATSSTLKNILV
Trigger: AACCAGGATATTTTTGAGTGTCGAACTTGTGGCTTGCTGGAGTCACTGTGTTGTTGTACGGAATGTGCAAGGGTTTGTCATAAAGGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACCAACAGGAACATTCTaGACATCTTCCACAAAAACC +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRPTGTF*TSSTKT
Trigger: GGTTTTTGTGGAAGATGTCAAGAATGTTCCTGTTGG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATCTACTTTTAGCACCTaGCCAACAGGAACATTCTTG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRSTFST*PTGTFL
Trigger: CAAGAATGTTCCTGTTGGCAAGGTGCTAAAAGTAGA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTTTTTAGGAGTCCTTaGGAAACAGTCGGGAACCTT +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLFRSP*ETVGNL
Trigger: AAGGTTCCCGACTGTTTCCAAAGGACTCCTAAAAAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTGATTGAGGTATACTaGCTCTTCTGGCAAAAGATG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLIEVY*LFWQKM
Trigger: CATCTTTTGCCAGAAGAGCAAGTATACCTCAATCAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGGCTTGGAATACACGCTaGCATTTTCCAATTGGCTGT +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLAWNTR*HFPIGC
Trigger: ACAGCCAATTGGAAAATGCAAGCGTGTATTCCAAGC...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTAGTGACTCTGCTACGTaGCACAATTCTTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVSDSAT*HNSSTA
Trigger: CGCTGTGGAAGAATTGTGCAACGTAGCAGAGTCACT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAATAAAGACCCTGACTaGGACGGCCAAAAAGATCCT +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLNKDPD*DGQKDP
Trigger: AGGATCTTTTTGGCCGTCCAAGTCAGGGTCTTTATT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCAGATGGCCCTGGTTTaGAACTCTCAGTTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIQMALV*NSQFLL
Trigger: CAGAAGAAACTGAGAGTTCAAAACCAGGGCCATCTG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCACTTGCAAATGCTGGTaGCATTGCTTGTACACGAGG +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFITCKCW*HCLYTR
Trigger: CCTCGTGTACAAGCAATGCAACCAGCATTTGCAAGT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATCAGCATTTGCACATaGACTTCACCGCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLISICT*TSPQPF
Trigger: AAATGGCTGCGGTGAAGTCAATGTGCAAATGCTGAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGACCAGAACCAACGCTaGAACTGCAGAAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVDQNQR*NCRSFS
Trigger: TGAGAAGCTTCTGCAGTTCAAGCGTTGGTTCTGGTC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS TCA 90 bp GTAAACAAGATCTTGTCGTTCTGTCATGCTCATCTTCTCTACTATTaGCCAGAACCAACGCTTGAACTGCAGAAGCTTCTCAGCATTTTC +
Preference number: 5 (lower is better)
Translates to: VNKILSFCHAHLLYY*PEPTLELQKLLSIF
Trigger: GAAAATGCTGAGAAGCTTCTGCAGTTCAAGCGTTGGTTCTGGTCAATAGTAGAGAAGATGAGCATGACAGAACGACAAGATCTTGTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000517465.1
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS TCA 90 bp CTAGATCCTTCATGTATGATTCAAGATAGTGGACTAAAGGCTCCCTaGCAAAATGAATGTGGTCTTCATAGGGGTGCTGGAACACTTCTA +
Preference number: 5 (lower is better)
Translates to: LDPSCMIQDSGLKAP*QNECGLHRGAGTLL
Trigger: TAGAAGTGTTCCAGCACCCCTATGAAGACCACATTCATTTTGTCAGGGAGCCTTTAGTCCACTATCTTGAATCATACATGAAGGATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521312.1
ENST00000521767.1
CDS GCA 90 bp AGAAGGGTAACCAAAATAGCTAATGTCTTCAGAAAACATGGCATCTaGATCAATAATGACACTTGGGTGGGCAGAATGAATGTCGGCATC +
Preference number: 5 (lower is better)
Translates to: RRVTKIANVFRKHGI*INNDTWVGRMNVGI
Trigger: GATGCCGACATTCATTCTGCCCACCCAAGTGTCATTATTGATGCAGATGCCATGTTTTCTGAAGACATTAGCTATTTTGGTTACCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 90 bp CCATCACATCTGTGGCTGATGAATGTCTGCAGCATCTGTAGATTCTaGTCTAAAACAACCGCTTGCTCAAGATTCATTAGATATTGTCGA +
Preference number: 5 (lower is better)
Translates to: PSHLWLMNVCSICRF*SKTTACSRFIRYCR
Trigger: TCGACAATATCTAATGAATCTTGAGCAAGCGGTTGTTTTAGAGCAGAATCTACAGATGCTGCAGACATTCATCAGCCACAGATGTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000521922.5
CDS GCA 90 bp GTCATGCTCATCTTCTCTACTATTGACCAGAACCAACGCTTGAACTaGAGAAGCTTCTCAGCATTTTCTCCTGATTCATCATTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: VMLIFSTIDQNQRLN*RSFSAFSPDSSLKE
Trigger: CTCTTTCAATGATGAATCAGGAGAAAATGCTGAGAAGCTTCTGCAGTTCAAGCGTTGGTTCTGGTCAATAGTAGAGAAGATGAGCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTCTTCTTATCCAAGTTaGGCTCTCCTTCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVSSYPS*ALLPCW
Trigger: CCAGCAAGGAAGGAGAGCCAAACTTGGATAAGAAGA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTGCTCTTATGCTATTaGCAGACAGGAGGACTATCT +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLLLCY*QTGGLS
Trigger: AGATAGTCCTCCTGTCTGCAAATAGCATAAGAGCAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAACTATCCGCTCTCCTaGAAGTTCAGAGTAAGTCTG +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFINYPLS*KFRVSL
Trigger: CAGACTTACTCTGAACTTCAAGGAGAGCGGATAGTT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTCAAACTTCGGCTACTaGATGATCCAGCCCGATTAC +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVSNFGY*MIQPDY
Trigger: GTAATCGGGCTGGATCATCAAGTAGCCGAAGTTTGA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCTTTATGACAAACCCTaGCACATTCCGTACAACAAC +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLYDKP*HIPYNN
Trigger: GTTGTTGTACGGAATGTGCAAGGGTTTGTCATAAAG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTATCATGCTCATCATGTaGTCCCTCTGCCTCAGCATT +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVIMLIM*SLCLSI
Trigger: AATGCTGAGGCAGAGGGACAACATGATGAGCATGAT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTAGCATTATCTTGGTaGCTGTGGTTACTTTCACTA +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLALSW*LWLLSL
Trigger: TAGTGAAAGTAACCACAGCAACCAAGATAATGCTAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGGCATGGGAGCTATTaGTGGTTCTTTCTAATGGCT +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIWHGSY*WFFLMA
Trigger: AGCCATTAGAAAGAACCACAAATAGCTCCCATGCCA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGAGGTGTATCCAATGTaGTCTGCTGATTCATTGCCT +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIEVYPM*SADSLP
Trigger: AGGCAATGAATCAGCAGACAACATTGGATACACCTC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCGAAAAATGGATGGTTTaGGCCAGTTTCTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIEKWMV*ASFCRK
Trigger: CTTCCTGCAGAAACTGGCCAAAACCATCCATTTTTC...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGCACTTCAAATGGATTaGGGGGTATACACCCAAGGA +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVALQMD*GVYTQG
Trigger: TCCTTGGGTGTATACCCCCAAATCCATTTGAAGTGC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCCAATTCAGTTAGGATaGATCCAGGTTCTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIPIQLG*IQVLLQ
Trigger: TTGGAGCAGAACCTGGATCAATCCTAACTGAATTGG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGTGTGGGTGCCTTTGTaGGCATTTTGGATACACTCT +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVVWVPL*AFWIHS
Trigger: AGAGTGTATCCAAAATGCCAACAAAGGCACCCACAC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCATCTCTGCATTAAACTaGTGTGGGTGCCTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIISALN*CGCLCW
Trigger: CCAACAAAGGCACCCACACAAGTTTAATGCAGAGAT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTGGCCTCATCCACTCTaGCTCTCAGAGAATCCTCAC +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSWPHPL*LSENPH
Trigger: GTGAGGATTCTCTGAGAGCAAGAGTGGATGAGGCCA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGACTTTACACAGGTCAATaGCAAATGCCAAATCCATTG +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRLYTGQ*QMPNPL
Trigger: CAATGGATTTGGCATTTGCAATTGACCTGTGTAAAG...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAAAACTGATCAGCATTaGCACATTGACTTCACCGCA +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLKTDQH*HIDFTA
Trigger: TGCGGTGAAGTCAATGTGCAAATGCTGATCAGTTTT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCAATATAGCCAAATGTaGCTAGTGCTCCTTAGGCCT +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIQYSQM*LVLLRP
Trigger: AGGCCTAAGGAGCACTAGCAACATTTGGCTATATTG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS TCA 90 bp CTGTTCTATGTCGTCACTCTGACTACTACTGCTATCAGAATCACTTaGGTCATTCGATTGAGAATCATCTTCAGAAAAGAAGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: LFYVVTLTTTAIRIT*VIRLRIIFRKEGRN
Trigger: GTTCCTGCCTTCTTTTCTGAAGATGATTCTCAATCGAATGACTCAAGTGATTCTGATAGCAGTAGTAGTCAGAGTGACGACATAGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 90 bp TGCAAAATATTTCGATTTCCATCACATCTGTGGCTGATGAATGTCTaGAGCATCTGTAGATTCTGCTCTAAAACAACCGCTTGCTCAAGA +
Preference number: 5 (lower is better)
Translates to: CKIFRFPSHLWLMNV*SICRFCSKTTACSR
Trigger: TCTTGAGCAAGCGGTTGTTTTAGAGCAGAATCTACAGATGCTGCAGACATTCATCAGCCACAGATGTGATGGAAATCGAAATATTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000521922.5
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGAAAGGCAGCATGATTaGGTCCCACCACACACTGTT +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSERQHD*VPPHTV
Trigger: AACAGTGTGTGGTGGGACCAAATCATGCTGCCTTTC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGATGACACTTCTGGATTaGCCTTGTAAAACAACTTGG +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLMTLLD*PCKTTW
Trigger: CCAAGTTGTTTTACAAGGCAAATCCAGAAGTGTCAT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTAACCCCAAAAATGTaGCTCGTGGATGATGTAATG +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLTPKM*LVDDVM
Trigger: CATTACATCATCCACGAGCAACATTTTTGGGGTTAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGTTGACCGTCGTCGTTaGTATGGCATTGATGCACTG +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSVDRRR*YGIDAL
Trigger: CAGTGCATCAATGCCATACAAACGACGACGGTCAAC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTCTACTTTTAGCACCTaGCCAACAGGAACATTCTTG +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFISTFST*PTGTFL
Trigger: CAAGAATGTTCCTGTTGGCAAGGTGCTAAAAGTAGA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTGGTGTTCCACCAGTTTaGACAACCTGCAATTCATCA +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVGVPPV*TTCNSS
Trigger: TGATGAATTGCAGGTTGTCAAAACTGGTGGAACACC...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTGCAATCTTTGGCCATaGGGTAGATGGTACCATTTC +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVCNLWP*GRWYHF
Trigger: GAAATGGTACCATCTACCCAATGGCCAAAGATTGCA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCCGAATTGTGCCACTTaGCTGATTGAGGTATACTTG +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVPNCAT*LIEVYL
Trigger: CAAGTATACCTCAATCAGCAAAGTGGCACAATTCGG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCAGTGACTCTGCTACGTaGCACAATTCTTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSSDSAT*HNSSTA
Trigger: CGCTGTGGAAGAATTGTGCAACGTAGCAGAGTCACT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCACTCCGGCGTAAGTTaGAAGGATCAATATAAATCA +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLHSGVS*KDQYKS
Trigger: TGATTTATATTGATCCTTCAAACTTACGCCGGAGTG...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCCCTGGCTAAACTGCTaGCAGATGTTAGGTAACTGC +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSPWLNC*QMLGNC
Trigger: GCAGTTACCTAACATCTGCAAGCAGTTTAGCCAGGG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCTAGTGACAAATCTCTaGACTGCTGGTTTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFILVTNL*TAGFSV
Trigger: AACTGAGAAACCAGCAGTCAAGAGATTTGTCACTAG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCAAATGCTGGTTGCATaGCTTGTACACGAGGATAAA +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIQMLVA*LVHEDK
Trigger: TTTATCCTCGTGTACAAGCAATGCAACCAGCATTTG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAAAACTGATCAGCATTaGCACATTGACTTCACCGCA +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIKTDQH*HIDFTA
Trigger: TGCGGTGAAGTCAATGTGCAAATGCTGATCAGTTTT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGAAAAGTAAACAAGATCTaGTCGTTCTGTCATGCTCAT +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRKVNKI*SFCHAH
Trigger: ATGAGCATGACAGAACGACAAGATCTTGTTTACTTT...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCAATATAGCCAAATGTaGCTAGTGCTCCTTAGGCCT +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVQYSQM*LVLLRP
Trigger: AGGCCTAAGGAGCACTAGCAACATTTGGCTATATTG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp CACAGTGTAAATTATGTTGTTCTGCTGTCATCTTTGGCTGGGGTTAGACCCAGATCTATACAAGAACCTTaGCTGAAACAGTTTCCACAA +
Preference number: 5 (lower is better)
Translates to: HSVNYVVLLSSLAGVRPRSIQEP*LKQFPQ
Trigger: TTGTGGAAACTGTTTCAGCAAAGGTTCTTGTATAGA...TCTGGGTCTAACCCCAGCCAAAGATGACAGCAGAACAACATAATTTACACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS TCA 90 bp ATCATTATTATCAGGTTTACCCAATTCCAATCTGTCTGGCTGTACTaGAAAACCAATCCTGCAAACTCTACCATCCTCAAGAAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: IIIIRFTQFQSVWLY*KTNPANSTILKKKG
Trigger: GCCTTTCTTCTTGAGGATGGTAGAGTTTGCAGGATTGGTTTTTCAGTACAGCCAGACAGATTGGAATTGGGTAAACCTGATAATAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
ENST00000522327.1
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCATGACACTTCTGGATTaGCCTTGTAAAACAACTTGG +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIMTLLD*PCKTTW
Trigger: CCAAGTTGTTTTACAAGGCAAATCCAGAAGTGTCAT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTCAGGAGATCTAAGTaGAAATCTACAGCTGTCATT +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLFRRSK*KSTAVI
Trigger: AATGACAGCTGTAGATTTCAACTTAGATCTCCTGAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCCAACAGGAACATTCTaGACATCTTCCACAAAAACC +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVPTGTF*TSSTKT
Trigger: GGTTTTTGTGGAAGATGTCAAGAATGTTCCTGTTGG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTTGAAACAACTGATATaGCATTTGCAATGGCCTCAA +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLLKQLI*HLQWPQ
Trigger: TTGAGGCCATTGCAAATGCAATATCAGTTGTTTCAA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCATCCCTCTTGCATCCTaGGCAGAAAGAAGTTCTCGT +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSIPLAS*AERSSR
Trigger: ACGAGAACTTCTTTCTGCCAAGGATGCAAGAGGGAT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTGCTATCAGAATCACTaGAGTCATTCGATTGAGAAT +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLCYQNH*SHSIEN
Trigger: ATTCTCAATCGAATGACTCAAGTGATTCTGATAGCA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCCATCAAGTCCGAGATTaGTCTAATGACAATGCTGTA +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIHQVRD*SNDNAV
Trigger: TACAGCATTGTCATTAGACAAATCTCGGACTTGATG...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGCACTTCAAATGGATTaGGGGGTATACACCCAAGGA +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSALQMD*GVYTQG
Trigger: TCCTTGGGTGTATACCCCCAAATCCATTTGAAGTGC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCAGATGGCCCTGGTTTaGAACTCTCAGTTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSQMALV*NSQFLL
Trigger: CAGAAGAAACTGAGAGTTCAAAACCAGGGCCATCTG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCTAGTGACAAATCTCTaGACTGCTGGTTTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVLVTNL*TAGFSV
Trigger: AACTGAGAAACCAGCAGTCAAGAGATTTGTCACTAG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTCAGAGAATCCTCACTaGCTAGAAGGAGAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSSENPH*LEGEAA
Trigger: AGCTGCTTCTCCTTCTAGCAAGTGAGGATTCTCTGA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGTAGACCTTTCCTCATaGCATGTAAGGGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSVDLSS*HVRAVL
Trigger: CAGAACAGCCCTTACATGCAATGAGGAAAGGTCTAC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGAAAGTAAACAAGATCTaGTCGTTCTGTCATGCTCAT +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLKVNKI*SFCHAH
Trigger: ATGAGCATGACAGAACGACAAGATCTTGTTTACTTT...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp ATGTTGCTAGTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGTCTATACAAGAACCTTaGCTGAAACAGTTTCCACAA +
Preference number: 5 (lower is better)
Translates to: MLLVLLRPLSYKLSKECLSIQEP*LKQFPQ
Trigger: TTGTGGAAACTGTTTCAGCAAAGGTTCTTGTATAGA...CAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCACTAGCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCAGTTGCTGTTCAACTTaGACCCATCATTATTATCAG +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFISCCST*THHYYQ
Trigger: CTGATAATAATGATGGGTCAAAGTTGAACAGCAACT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTACCCATGTAGCAACCTaGTTATTTTCTGTAGCTACA +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVTHVAT*LFSVAT
Trigger: TGTAGCTACAGAAAATAACAAGGTTGCTACATGGGT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGGTGTTCCACCAGTTTaGACAACCTGCAATTCATCA +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSGVPPV*TTCNSS
Trigger: TGATGAATTGCAGGTTGTCAAAACTGGTGGAACACC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCAACTGATATTGCATTaGCAATGGCCTCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSQLILH*QWPQQQ
Trigger: CTGCTGTTGAGGCCATTGCAAATGCAATATCAGTTG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCCCACTAGCATTATCTaGGTTGCTGTGGTTACTTTC +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSPTSII*VAVVTF
Trigger: GAAAGTAACCACAGCAACCAAGATAATGCTAGTGGG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCTGCTATCAGAATCACTaGAGTCATTCGATTGAGAAT +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFICYQNH*SHSIEN
Trigger: ATTCTCAATCGAATGACTCAAGTGATTCTGATAGCA...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTGGCATGGGAGCTATTaGTGGTTCTTTCTAATGGCT +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSWHGSY*WFFLMA
Trigger: AGCCATTAGAAAGAACCACAAATAGCTCCCATGCCA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTCATCAAGTCCGAGATTaGTCTAATGACAATGCTGTA +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVHQVRD*SNDNAV
Trigger: TACAGCATTGTCATTAGACAAATCTCGGACTTGATG...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGAGGTGTATCCAATGTaGTCTGCTGATTCATTGCCT +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSEVYPM*SADSLP
Trigger: AGGCAATGAATCAGCAGACAACATTGGATACACCTC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCGAAAAATGGATGGTTTaGGCCAGTTTCTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSEKWMV*ASFCRK
Trigger: CTTCCTGCAGAAACTGGCCAAAACCATCCATTTTTC...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCCAATTCAGTTAGGATaGATCCAGGTTCTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSPIQLG*IQVLLQ
Trigger: TTGGAGCAGAACCTGGATCAATCCTAACTGAATTGG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCATCTCTGCATTAAACTaGTGTGGGTGCCTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSISALN*CGCLCW
Trigger: CCAACAAAGGCACCCACACAAGTTTAATGCAGAGAT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCATCAGCATTTGCACATaGACTTCACCGCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSISICT*TSPQPF
Trigger: AAATGGCTGCGGTGAAGTCAATGTGCAAATGCTGAT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp GTGCTCCTTAGGCCTTTAAGCTATAAACTCAGCAAGGAATGTCTGCATTTTATCATTGTGATAAAAGTATaGTGCATTGGCCCCATCATA +
Preference number: 5 (lower is better)
Translates to: VLLRPLSYKLSKECLHFIIVIKV*CIGPII
Trigger: TATGATGGGGCCAATGCACAATACTTTTATCACAAT...GATAAAATGCAGACATTCCTTGCTGAGTTTATAGCTTAAAGGCCTAAGGAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTAAAAGCATAGTGCCTTaGAACATGAAGACTATCCTC +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVKSIVP*NMKTIL
Trigger: GAGGATAGTCTTCATGTTCAAAGGCACTATGCTTTT...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTTGCTCTTATGCTATTaGCAGACAGGAGGACTATCT +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLLLCY*QTGGLS
Trigger: AGATAGTCCTCCTGTCTGCAAATAGCATAAGAGCAA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TTTAGTGTTAACAGGGCTGAGAATATCATGTGGTTCAGTCTTCTGAAGGAAGTTTTGAAACAACTGATATaGCATTTGCAATGGCCTCAA +
Preference number: 5 (lower is better)
Translates to: FSVNRAENIMWFSLLKEVLKQLI*HLQWPQ
Trigger: TTGAGGCCATTGCAAATGCAATATCAGTTGTTTCAA...AACTTCCTTCAGAAGACTGAACCACATGATATTCTCAGCCCTGTTAACACTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCTTTATGACAAACCCTaGCACATTCCGTACAACAAC +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLYDKP*HIPYNN
Trigger: GTTGTTGTACGGAATGTGCAAGGGTTTGTCATAAAG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCTGATTGAGGTATACTaGCTCTTCTGGCAAAAGATG +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLIEVY*LFWQKM
Trigger: CATCTTTTGCCAGAAGAGCAAGTATACCTCAATCAG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCAAATGCTGGTTGCATaGCTTGTACACGAGGATAAA +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSQMLVA*LVHEDK
Trigger: TTTATCCTCGTGTACAAGCAATGCAACCAGCATTTG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTTAACCCCAAAAATGTaGCTCGTGGATGATGTAATG +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLTPKM*LVDDVM
Trigger: CATTACATCATCCACGAGCAACATTTTTGGGGTTAA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCACCCATGTAGCAACCTaGTTATTTTCTGTAGCTACA +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSTHVAT*LFSVAT
Trigger: TGTAGCTACAGAAAATAACAAGGTTGCTACATGGGT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCACTCCGGCGTAAGTTaGAAGGATCAATATAAATCA +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSHSGVS*KDQYKS
Trigger: TGATTTATATTGATCCTTCAAACTTACGCCGGAGTG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCCTTTACACAGGTCAATaGCAAATGCCAAATCCATTG +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSLYTGQ*QMPNPL
Trigger: CAATGGATTTGGCATTTGCAATTGACCTGTGTAAAG...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCTTCAGGAGATCTAAGTaGAAATCTACAGCTGTCATT +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSFRRSK*KSTAVI
Trigger: AATGACAGCTGTAGATTTCAACTTAGATCTCCTGAA...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS-3UTR CAA 90 bp TATTTTGAAATTCCCTATTCCCTCTATACAAGAACCTTTGCTGAAACAGTTTCCACAAAACCAAAATTCTaGGTCTTAATGGCGAGTAAC +
Preference number: 5 (lower is better)
Translates to: YFEIPYSLYTRTFAETVSTKPKF*VLMASN
Trigger: GTTACTCGCCATTAAGACCAAGAATTTTGGTTTTGT...GGAAACTGTTTCAGCAAAGGTTCTTGTATAGAGGGAATAGGGAATTTCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS GCA 72 bp TCACTAGCGAGAAGCTGCCGCCGCCATCTTCACTTCTaGCCCAGTTTCTCCGTCTCGCAGGCTCCGCTCCGG +
Preference number: 6 (lower is better)
Translates to: SLARSCRRHLHF*PSFSVSQAPLR
Trigger: CCGGAGCGGAGCCTGCGAGACGGAGAAACTGGGGCAGAAGTGAAGATGGCGGCGGCAGCTTCTCGCTAGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521922.5
CDS GCA 72 bp GAGATGAGCCCGCACCGCGCGTCACTAGCGAGAAGCTaGCGCCGCCATCTTCACTTCTGCCCCAGTTTCTCC +
Preference number: 6 (lower is better)
Translates to: EMSPHRASLARS*RRHLHFCPSFS
Trigger: GGAGAAACTGGGGCAGAAGTGAAGATGGCGGCGGCAGCTTCTCGCTAGTGACGCGCGGTGCGGGCTCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521922.5
CDS CCA 72 bp CCGGCAGCGGGTGAACCACGAAATGGATGGACGTCATaGTGCTTTCCTTCTCGTCCTCCACTCGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: PAAGEPRNGWTS*CFPSRPPLEGG
Trigger: GCCGCCCTCGAGTGGAGGACGAGAAGGAAAGCACCATGACGTCCATCCATTTCGTGGTTCACCCGCTGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp CTGTCATTGAGCTGGTCCTCGGTGCCCGGCAGCGGGTaGACCACGAAATGGATGGACGTCATGGTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: LSLSWSSVPGSG*TTKWMDVMVLS
Trigger: GGAAAGCACCATGACGTCCATCCATTTCGTGGTTCACCCGCTGCCGGGCACCGAGGACCAGCTCAATGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp GACCCTCGATCCCGTCCTGTCCGAATAACTCGAGTCTaGCGGCGGGAATCTCGAGCTCCAGCTGATGACCTA +
Preference number: 6 (lower is better)
Translates to: DPRSRPVRITRV*RRESRAPADDL
Trigger: TAGGTCATCAGCTGGAGCTCGAGATTCCCGCCGGCAGACTCGAGTTATTCGGACAGGACGGGATCGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp AGTGGAGGTGCTTGGTCCTTGACCAGTACCGGTTGCTaGTGTGGTAAGAGATCCCACAGCGGGGGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: SGGAWSLTSTGC*CGKRSHSGGQD
Trigger: ATCCTGGCCCCCGCTGTGGGATCTCTTACCACAGCAGCAACCGGTACTGGTCAAGGACCAAGCACCTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000520898.5
ENST00000521922.5
CDS GCA 72 bp TGCTGGTGTAGATGTACTGGAAGGGGCTGTACTGGCTaGTCGCTGATGCTGGGTGTTGCGGACAGCCCACTG +
Preference number: 6 (lower is better)
Translates to: CWCRCTGRGCTG*SLMLGVADSPL
Trigger: CAGTGGGCTGTCCGCAACACCCAGCATCAGCGAGCAGCCAGTACAGCCCCTTCCAGTACATCTACACCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp TACTGGCTGCTCGCTGATGCTGGGTGTTGCGGACAGCCCACTGCATaGAACGGGGAGCTTGGGCAGCACCATTGGCATGGGAGCTATTTG +
Preference number: 6 (lower is better)
Translates to: YWLLADAGCCGQPTA*NGELGQHHWHGSYL
Trigger: CAAATAGCTCCCATGCCAATGGTGCTGCCCAAGCTCCCCGTTCAATGCAGTGGGCTGTCCGCAACACCCAGCATCAGCGAGCAGCCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp AATAGTGGAGGTGCTTGGTCCTTGACCAGTACCGGTTaGTGCTGTGGTAAGAGATCCCACAGCGGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: NSGGAWSLTSTG*CCGKRSHSGGQ
Trigger: CTGGCCCCCGCTGTGGGATCTCTTACCACAGCAGCAACCGGTACTGGTCAAGGACCAAGCACCTCCACTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000520898.5
ENST00000521922.5
CDS TCA 72 bp GAGAAACCATGGAGAGTCGCTTGTCCTACCAGGCCTTaGCGTCCTCCCTGCCCCCGAGTTGCTGTTCAACTT +
Preference number: 6 (lower is better)
Translates to: EKPWRVACPTRP*RPPCPRVAVQL
Trigger: AAGTTGAACAGCAACTCGGGGGCAGGGAGGACGTCAAGGCCTGGTAGGACAAGCGACTCTCCATGGTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
ENST00000522327.1
CDS TCA 72 bp GTAGATGTACTGGAAGGGGCTGTACTGGCTGCTCGCTaGTGCTGGGTGTTGCGGACAGCCCACTGCATTGAA +
Preference number: 6 (lower is better)
Translates to: VDVLEGAVLAAR*CWVLRTAHCIE
Trigger: TTCAATGCAGTGGGCTGTCCGCAACACCCAGCATCAGCGAGCAGCCAGTACAGCCCCTTCCAGTACATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp GTGTTGCGGACAGCCCACTGCATTGAACGGGGAGCTTaGGCAGCACCATTGGCATGGGAGCTATTTGTGGTT +
Preference number: 6 (lower is better)
Translates to: VLRTAHCIERGA*AAPLAWELFVV
Trigger: AACCACAAATAGCTCCCATGCCAATGGTGCTGCCCAAGCTCCCCGTTCAATGCAGTGGGCTGTCCGCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp AGAGAAACCATGGAGAGTCGCTTGTCCTACCAGGCCTaGACGTCCTCCCTGCCCCCGAGTTGCTGTTCAACT +
Preference number: 6 (lower is better)
Translates to: RETMESRLSYQA*TSSLPPSCCST
Trigger: AGTTGAACAGCAACTCGGGGGCAGGGAGGACGTCAAGGCCTGGTAGGACAAGCGACTCTCCATGGTTTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
ENST00000522327.1
CDS CAA 90 bp CAGAACCTGAGAGAAACCATGGAGAGTCGCTTGTCCTACCAGGCCTaGACGTCCTCCCTGCCCCCGAGTTGCTGTTCAACTTTGACCCAT +
Preference number: 6 (lower is better)
Translates to: QNLRETMESRLSYQA*TSSLPPSCCSTLTH
Trigger: ATGGGTCAAAGTTGAACAGCAACTCGGGGGCAGGGAGGACGTCAAGGCCTGGTAGGACAAGCGACTCTCCATGGTTTCTCTCAGGTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
ENST00000522327.1
CDS GCA 72 bp GTAACTGCTGGCGTTGCTAGCTTCCAAAGCAGCTGCTaGAGCTGCAGCACTTGTACTGATGGTACCACTCCG +
Preference number: 6 (lower is better)
Translates to: VTAGVASFQSSC*SCSTCTDGTTP
Trigger: CGGAGTGGTACCATCAGTACAAGTGCTGCAGCTGCAGCAGCTGCTTTGGAAGCTAGCAACGCCAGCAGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp ACGAGGATAAAGCCTCTCTCCAAGTGCCTGCCGATGTaGTGGCAAAGGCTCAGGATCATCGCTAGGATTCCC +
Preference number: 6 (lower is better)
Translates to: TRIKPLSKCLPM*WQRLRIIARIP
Trigger: GGGAATCCTAGCGATGATCCTGAGCCTTTGCCAGCACATCGGCAGGCACTTGGAGAGAGGCTTTATCCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp GGTGCCTTCAACTGGCCACAACTTACCCTAAGGTGTTaGCTGCCAGCCTGCCTAGAGTCTCAGAACCTGAGA +
Preference number: 6 (lower is better)
Translates to: GAFNWPQLTLRC*LPACLESQNLR
Trigger: TCTCAGGTTCTGAGACTCTAGGCAGGCTGGCAGGCAACACCTTAGGGTAAGTTGTGGCCAGTTGAAGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522327.1
CDS CCA 72 bp TGGCTCTGTGGAAGGACCTGGAATAGTGGAGGTGCTTaGTCCTTGACCAGTACCGGTTGCTGCTGTGGTAAG +
Preference number: 6 (lower is better)
Translates to: WLCGRTWNSGGA*SLTSTGCCCGK
Trigger: CTTACCACAGCAGCAACCGGTACTGGTCAAGGACCAAGCACCTCCACTATTCCAGGTCCTTCCACAGAGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000520898.5
ENST00000521922.5
CDS CCA 72 bp TGGCTCTGTGGAAGGACCTGGAATAGTGGAGGTGCTTaGTCCTTGACCAGTACCGGTTGCTGCAGGATCCAT +
Preference number: 6 (lower is better)
Translates to: WLCGRTWNSGGA*SLTSTGCCRIH
Trigger: ATGGATCCTGCAGCAACCGGTACTGGTCAAGGACCAAGCACCTCCACTATTCCAGGTCCTTCCACAGAGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519365.1
CDS TCA 72 bp CGGTTACGATCTTCCCTGATTCGAGGTGGCCTGTATTaGCAATGCTCCACCGTCTGCCTTGCGACTGTCTGT +
Preference number: 6 (lower is better)
Translates to: RLRSSLIRGGLY*QCSTVCLATVC
Trigger: ACAGACAGTCGCAAGGCAGACGGTGGAGCATTGTCAATACAGGCCACCTCGAATCAGGGAAGATCGTAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp AGGATAAAGCCTCTCTCCAAGTGCCTGCCGATGTGCTaGCAAAGGCTCAGGATCATCGCTAGGATTCCCTTC +
Preference number: 6 (lower is better)
Translates to: RIKPLSKCLPMC*QRLRIIARIPF
Trigger: GAAGGGAATCCTAGCGATGATCCTGAGCCTTTGCCAGCACATCGGCAGGCACTTGGAGAGAGGCTTTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp TCGGTTACGATCTTCCCTGATTCGAGGTGGCCTGTATaGACAATGCTCCACCGTCTGCCTTGCGACTGTCTG +
Preference number: 6 (lower is better)
Translates to: SVTIFPDSRWPV*TMLHRLPCDCL
Trigger: CAGACAGTCGCAAGGCAGACGGTGGAGCATTGTCAATACAGGCCACCTCGAATCAGGGAAGATCGTAACCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp GGGTTGACCGTCGTCGTTTGTATGGCATTGATGCACTGCTGGCAATaGAGGATGCATCACTACACGTGGATGCTGGAGATGGTGGAGGAC +
Preference number: 6 (lower is better)
Translates to: GLTVVVCMALMHCWQ*RMHHYTWMLEMVED
Trigger: GTCCTCCACCATCTCCAGCATCCACGTGTAGTGATGCATCCTCAATTGCCAGCAGTGCATCAATGCCATACAAACGACGACGGTCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp TTGCGGACAGCCCACTGCATTGAACGGGGAGCTTGGGCAGCACCATaGGCATGGGAGCTATTTGTGGTTCTTTCTAATGGCTCATCAAGC +
Preference number: 6 (lower is better)
Translates to: LRTAHCIERGAWAAP*AWELFVVLSNGSSS
Trigger: GCTTGATGAGCCATTAGAAAGAACCACAAATAGCTCCCATGCCAATGGTGCTGCCCAAGCTCCCCGTTCAATGCAGTGGGCTGTCCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp CATTGCTTGTACACGAGGATAAAGCCTCTCTCCAAGTaGCTGCCGATGTGCTGGCAAAGGCTCAGGATCATC +
Preference number: 6 (lower is better)
Translates to: HCLYTRIKPLSK*LPMCWQRLRII
Trigger: GATGATCCTGAGCCTTTGCCAGCACATCGGCAGGCACTTGGAGAGAGGCTTTATCCTCGTGTACAAGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp GGCTGTTTTTCGGTTACGATCTTCCCTGATTCGAGGTaGCCTGTATTGACAATGCTCCACCGTCTGCCTTGC +
Preference number: 6 (lower is better)
Translates to: GCFSVTIFPDSR*PVLTMLHRLPC
Trigger: GCAAGGCAGACGGTGGAGCATTGTCAATACAGGCCACCTCGAATCAGGGAAGATCGTAACCGAAAAACAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp AGGCTCAGGATCATCGCTAGGATTCCCTTCAGAGGCTaGTCTAAAGGGCCTAGTGTCGATGGAAAGCTGTCT +
Preference number: 6 (lower is better)
Translates to: RLRIIARIPFRG*SKGPSVDGKLS
Trigger: AGACAGCTTTCCATCGACACTAGGCCCTTTAGACCAGCCTCTGAAGGGAATCCTAGCGATGATCCTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp GTCCTACCAGGCCTTGACGTCCTCCCTGCCCCCGAGTaGCTGTTCAACTTTGACCCATCATTATTATCAGGT +
Preference number: 6 (lower is better)
Translates to: VLPGLDVLPAPE*LFNFDPSLLSG
Trigger: ACCTGATAATAATGATGGGTCAAAGTTGAACAGCAACTCGGGGGCAGGGAGGACGTCAAGGCCTGGTAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
ENST00000522327.1
CDS CAA 90 bp GATCAGCCAAGGGGATGGCTTCAGCCAGAGGCACTTCAAATGGATTaGGGGGTATACACCCAAGGAATGTCATGGAGTCTGAACGTCGGA +
Preference number: 6 (lower is better)
Translates to: DQPRGWLQPEALQMD*GVYTQGMSWSLNVG
Trigger: TCCGACGTTCAGACTCCATGACATTCCTTGGGTGTATACCCCCAAATCCATTTGAAGTGCCTCTGGCTGAAGCCATCCCCTTGGCTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp GGTAATTGCAGCAGGATAAGCTCGGCCACTTACAGCTaGCATAAATGGGGTCATCCCTCTTGCATCCTTGGC +
Preference number: 6 (lower is better)
Translates to: GNCSRISSATYS*HKWGHPSCILG
Trigger: GCCAAGGATGCAAGAGGGATGACCCCATTTATGTCAGCTGTAAGTGGCCGAGCTTATCCTGCTGCAATTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp CTTCAGGACTGGCTGTTTTTCGGTTACGATCTTCCCTaGTTCGAGGTGGCCTGTATTGACAATGCTCCACCG +
Preference number: 6 (lower is better)
Translates to: LQDWLFFGYDLP*FEVACIDNAPP
Trigger: CGGTGGAGCATTGTCAATACAGGCCACCTCGAATCAGGGAAGATCGTAACCGAAAAACAGCCAGTCCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp GATGCGCCTCTGCTGTGGATTCCTGATGATGTAGGATaGCTGAGACTGACTGGAGCTGCTAGACTGATCAGA +
Preference number: 6 (lower is better)
Translates to: DAPLLWIPDDVG*LRLTGAARLIR
Trigger: TCTGATCAGTCTAGCAGCTCCAGTCAGTCTCAGTCATCCTACATCATCAGGAATCCACAGCAGAGGCGCATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp CTTCCAAAGCAGCTGCTGCAGCTGCAGCACTTGTACTaGTGGTACCACTCCGGCGTAAGTTTGAAGGATCAA +
Preference number: 6 (lower is better)
Translates to: LPKQLLQLQHLY*WYHSGVSLKDQ
Trigger: TTGATCCTTCAAACTTACGCCGGAGTGGTACCATCAGTACAAGTGCTGCAGCTGCAGCAGCTGCTTTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp GGGTTGACCGTCGTCGTTTGTATGGCATTGATGCACTaGTGGCAATTGAGGATGCATCACTACACGTGGATG +
Preference number: 6 (lower is better)
Translates to: GLTVVVCMALMH*WQLRMHHYTWM
Trigger: CATCCACGTGTAGTGATGCATCCTCAATTGCCAGCAGTGCATCAATGCCATACAAACGACGACGGTCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp CTGCATGGCATCTATGCTAGTACTAGCCAGGGTAAATaGTGCAGTTGGACGAGCAATCCCCATTCTGACAGG +
Preference number: 6 (lower is better)
Translates to: LHGIYASTSQGK*CSWTSNPHSDR
Trigger: CCTGTCAGAATGGGGATTGCTCGTCCAACTGCACCATTTACCCTGGCTAGTACTAGCATAGATGCCATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp AGGGGATGGCTTCAGCCAGAGGCACTTCAAATGGATTaGGGGGTATACACCCAAGGAATGTCATGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: RGWLQPEALQMD*GVYTQGMSWSL
Trigger: CAGACTCCATGACATTCCTTGGGTGTATACCCCCAAATCCATTTGAAGTGCCTCTGGCTGAAGCCATCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp CCTCAACCTCTGCTGTGGATTCCTGATGATGTAGGATaGCTGAGACTGACTGGAGCTGCTAGACTGATCAGA +
Preference number: 6 (lower is better)
Translates to: PQPLLWIPDDVG*LRLTGAARLIR
Trigger: TCTGATCAGTCTAGCAGCTCCAGTCAGTCTCAGTCATCCTACATCATCAGGAATCCACAGCAGAGGTTGAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519528.1
CDS GCA 72 bp CATGGCATCTATGCTAGTACTAGCCAGGGTAAATGGTaGAGTTGGACGAGCAATCCCCATTCTGACAGGAAC +
Preference number: 6 (lower is better)
Translates to: HGIYASTSQGKW*SWTSNPHSDRN
Trigger: GTTCCTGTCAGAATGGGGATTGCTCGTCCAACTGCACCATTTACCCTGGCTAGTACTAGCATAGATGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp ATGCACTGCTGGCAATTGAGGATGCATCACTACACGTaGATGCTGGAGATGGTGGAGGACCCATTTCTGTTT +
Preference number: 6 (lower is better)
Translates to: MHCWQLRMHHYT*MLEMVEDPFLF
Trigger: AAACAGAAATGGGTCCTCCACCATCTCCAGCATCCACGTGTAGTGATGCATCCTCAATTGCCAGCAGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp AGCATTCGCCTTTCGATCCTTGGATTCTACTACAGATaGCTCTGTGGAAGGACCTGGAATAGTGGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: SIRLSILGFYYR*LCGRTWNSGGA
Trigger: AGCACCTCCACTATTCCAGGTCCTTCCACAGAGCCATCTGTAGTAGAATCCAAGGATCGAAAGGCGAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000520898.5
ENST00000521922.5
CDS CCA 72 bp TGCATTGAACGGGGAGCTTGGGCAGCACCATTGGCATaGGAGCTATTTGTGGTTCTTTCTAATGGCTCATCA +
Preference number: 6 (lower is better)
Translates to: CIERGAWAAPLA*ELFVVLSNGSS
Trigger: TGATGAGCCATTAGAAAGAACCACAAATAGCTCCCATGCCAATGGTGCTGCCCAAGCTCCCCGTTCAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp GTCGTCGTTTGTATGGCATTGATGCACTGCTGGCAATaGAGGATGCATCACTACACGTGGATGCTGGAGATG +
Preference number: 6 (lower is better)
Translates to: VVVCMALMHCWQ*RMHHYTWMLEM
Trigger: CATCTCCAGCATCCACGTGTAGTGATGCATCCTCAATTGCCAGCAGTGCATCAATGCCATACAAACGACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp GAGGTGGCCTGTATTGACAATGCTCCACCGTCTGCCTaGCGACTGTCTGTACTAAGAATAGTAAGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: EVACIDNAPPSA*RLSVLRIVRGA
Trigger: AGCACCTCTTACTATTCTTAGTACAGACAGTCGCAAGGCAGACGGTGGAGCATTGTCAATACAGGCCACCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp TGGACGAGCAATCCCCATTCTGACAGGAACAATCAGTaGCTCTGCTACGTTGCACAATTCTTCCACAGCGTA +
Preference number: 6 (lower is better)
Translates to: WTSNPHSDRNNQ*LCYVAQFFHSV
Trigger: TACGCTGTGGAAGAATTGTGCAACGTAGCAGAGTCACTGATTGTTCCTGTCAGAATGGGGATTGCTCGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp GCCAATCGGGATCCCTTATTCCTCCCATGCAATCTTTaGCCATTGGGTAGATGGTACCATTTCCATCTCGAA +
Preference number: 6 (lower is better)
Translates to: ANRDPLFLPCNL*PLGRWYHFHLE
Trigger: TTCGAGATGGAAATGGTACCATCTACCCAATGGCCAAAGATTGCATGGGAGGAATAAGGGATCCCGATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp ACAGCTCAGAGTCTCTCTCTCGAGATGAGCCTAGCCTaGAAAGTGATGAACGACGAAAAGAAGGGTAACCAA +
Preference number: 6 (lower is better)
Translates to: TAQSLSLEMSLA*KVMNDEKKGNQ
Trigger: TTGGTTACCCTTCTTTTCGTCGTTCATCACTTTCCAGGCTAGGCTCATCTCGAGAGAGAGACTCTGAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521922.5
CDS CAA 90 bp GTTGCTGCAGTGACAACGCTTCTGCGCCCACTAGCATTATCTTGGTaGCTGTGGTTACTTTCACTATCACTTTCTGTTTCAGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: VAAVTTLLRPLALSW*LWLLSLSLSVSAAA
Trigger: AGCAGCAGCTGAAACAGAAAGTGATAGTGAAAGTAACCACAGCAACCAAGATAATGCTAGTGGGCGCAGAAGCGTTGTCACTGCAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp AGCAGTTGCTGCAGTGACAACGCTTCTGCGCCCACTAGCATTATCTaGGTTGCTGTGGTTACTTTCACTATCACTTTCTGTTTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SSCCSDNASAPTSII*VAVVTFTITFCFSC
Trigger: GCAGCTGAAACAGAAAGTGATAGTGAAAGTAACCACAGCAACCAAGATAATGCTAGTGGGCGCAGAAGCGTTGTCACTGCAGCAACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp GAAACAGTCCAGCCGAATTGTGCCACTTTGCTGATTGAGGTATACTaGCTCTTCTGGCAAAAGATGGCCTATTCTACTGCTGGCACTAAG +
Preference number: 6 (lower is better)
Translates to: ETVQPNCATLLIEVY*LFWQKMAYSTAGTK
Trigger: CTTAGTGCCAGCAGTAGAATAGGCCATCTTTTGCCAGAAGAGCAAGTATACCTCAATCAGCAAAGTGGCACAATTCGGCTGGACTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp TCCTCTCTCTTCTCGCTGAATTCTGAGAAGCGTGAAGAGGATGATTaGGATGTCCAGGATCACCAGCAGATGCTAATGCAGAACCATAAC +
Preference number: 6 (lower is better)
Translates to: SSLFSLNSEKREEDD*DVQDHQQMLMQNHN
Trigger: GTTATGGTTCTGCATTAGCATCTGCTGGTGATCCTGGACATCCAAATCATCCTCTTCACGCTTCTCAGAATTCAGCGAGAAGAGAGAGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp CTTTCCCGGTCTCTCTCTCCTCGGTTCCTTAATCTCTaGATTAAACTTGTGTGGGTGCCTTTGTTGGCATTT +
Preference number: 6 (lower is better)
Translates to: LSRSLSPRFLNL*IKLVWVPLLAF
Trigger: AAATGCCAACAAAGGCACCCACACAAGTTTAATGCAGAGATTAAGGAACCGAGGAGAGAGAGACCGGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521566.1
ENST00000521922.5
CDS CCA 72 bp CTAAGGGAAGAAGGAGAACTCGAGATGAGCCTAGCCTaGAAAGTGATGAACGACGAAAAGAAGGGTAACCAA +
Preference number: 6 (lower is better)
Translates to: LREEGELEMSLA*KVMNDEKKGNQ
Trigger: TTGGTTACCCTTCTTTTCGTCGTTCATCACTTTCCAGGCTAGGCTCATCTCGAGTTCTCCTTCTTCCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220959.8
ENST00000520539.6
CDS CCA 72 bp ATCTATGCTAGTACTAGCCAGGGTAAATGGTGCAGTTaGACGAGCAATCCCCATTCTGACAGGAACAATCAG +
Preference number: 6 (lower is better)
Translates to: IYASTSQGKWCS*TSNPHSDRNNQ
Trigger: CTGATTGTTCCTGTCAGAATGGGGATTGCTCGTCCAACTGCACCATTTACCCTGGCTAGTACTAGCATAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp GCTGGAATCCTTCTTCACTGGCTGGCAGTGATGGGCTaGATGTCCAAAAGTAAACAAGATCTTGTCGTTCTG +
Preference number: 6 (lower is better)
Translates to: AGILLHWLAVMG*MSKSKQDLVVL
Trigger: CAGAACGACAAGATCTTGTTTACTTTTGGACATCAAGCCCATCACTGCCAGCCAGTGAAGAAGGATTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000517465.1
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp CTGCAAACTCTACCATCCTCAAGAAGAAAGGCAGCATaGTTTGGTCCCACCACACACTGTTTAATAGTAGCC +
Preference number: 6 (lower is better)
Translates to: LQTLPSSRRKAA*FGPTTHCLIVA
Trigger: GGCTACTATTAAACAGTGTGTGGTGGGACCAAATCATGCTGCCTTTCTTCTTGAGGATGGTAGAGTTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
ENST00000522327.1
CDS GCA 72 bp GATGGTGGAGGACCCATTTCTGTTTTCACTGGCTCCTaGTTACTTTCAGGCTTAGCTTCAGTAGTTTTGCTA +
Preference number: 6 (lower is better)
Translates to: DGGGPISVFTGS*LLSGLASVVLL
Trigger: TAGCAAAACTACTGAAGCTAAGCCTGAAAGTAAGCAGGAGCCAGTGAAAACAGAAATGGGTCCTCCACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp TGTGGTCTTCATAGGGGTGCTGGAACACTTCTACAATaGTCAGAGGGAGCACTACAGAAGAACAGAAAAATG +
Preference number: 6 (lower is better)
Translates to: CGLHRGAGTLLQ*SEGALQKNRKM
Trigger: CATTTTTCTGTTCTTCTGTAGTGCTCCCTCTGAGCATTGTAGAAGTGTTCCAGCACCCCTATGAAGACCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521312.1
ENST00000521767.1
CDS CCA 72 bp TGTGCCACTTTGCTGATTGAGGTATACTTGCTCTTCTaGCAAAAGATGGCCTATTCTACTGCTGGCACTAAG +
Preference number: 6 (lower is better)
Translates to: CATLLIEVYLLF*QKMAYSTAGTK
Trigger: CTTAGTGCCAGCAGTAGAATAGGCCATCTTTTGCCAGAAGAGCAAGTATACCTCAATCAGCAAAGTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp ACGCTTCTGCGCCCACTAGCATTATCTTGGTTGCTGTaGTTACTTTCACTATCACTTTCTGTTTCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: TLLRPLALSWLL*LLSLSLSVSAA
Trigger: AGCAGCTGAAACAGAAAGTGATAGTGAAAGTAACCACAGCAACCAAGATAATGCTAGTGGGCGCAGAAGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp GTCATGGAGTCTGAACGTCGGAAAAATGGATGGTTTTaGCCAGTTTCTGCAGGAAGAGAGTCATCATCCTTA +
Preference number: 6 (lower is better)
Translates to: VMESERRKNGWF*PVSAGRESSSL
Trigger: TAAGGATGATGACTCTCTTCCTGCAGAAACTGGCCAAAACCATCCATTTTTCCGACGTTCAGACTCCATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp CAGCCGAATTGTGCCACTTTGCTGATTGAGGTATACTaGCTCTTCTGGCAAAAGATGGCCTATTCTACTGCT +
Preference number: 6 (lower is better)
Translates to: QPNCATLLIEVY*LFWQKMAYSTA
Trigger: AGCAGTAGAATAGGCCATCTTTTGCCAGAAGAGCAAGTATACCTCAATCAGCAAAGTGGCACAATTCGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp GCAATGAGTGAAACAGTCCAGCCGAATTGTGCCACTTaGCTGATTGAGGTATACTTGCTCTTCTGGCAAAAG +
Preference number: 6 (lower is better)
Translates to: AMSETVQPNCAT*LIEVYLLFWQK
Trigger: CTTTTGCCAGAAGAGCAAGTATACCTCAATCAGCAAAGTGGCACAATTCGGCTGGACTGTTTCACTCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp TGCAGTGACAACGCTTCTGCGCCCACTAGCATTATCTaGGTTGCTGTGGTTACTTTCACTATCACTTTCTGT +
Preference number: 6 (lower is better)
Translates to: CSDNASAPTSII*VAVVTFTITFC
Trigger: ACAGAAAGTGATAGTGAAAGTAACCACAGCAACCAAGATAATGCTAGTGGGCGCAGAAGCGTTGTCACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp AACTTCGGCTACTTGATGATCCAGCCCGATTACCTGGGCCATTACTaGAAACAACTGATATTGCATTTGCAATGGCCTCAACAGCAGAAA +
Preference number: 6 (lower is better)
Translates to: NFGYLMIQPDYLGHY*KQLILHLQWPQQQK
Trigger: TTTCTGCTGTTGAGGCCATTGCAAATGCAATATCAGTTGTTTCAAGTAATGGCCCAGGTAATCGGGCTGGATCATCAAGTAGCCGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000520898.5
ENST00000521922.5
CDS TCA 72 bp CATCTACTTTTAGCACCTTGCCAACAGGAACATTCTTaGCATCTTCCACAAAAACCACTTCCCGAAGAGACC +
Preference number: 6 (lower is better)
Translates to: HLLLAPCQQEHS*HLPQKPLPEET
Trigger: GGTCTCTTCGGGAAGTGGTTTTTGTGGAAGATGTCAAGAATGTTCCTGTTGGCAAGGTGCTAAAAGTAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp AGAGAAGAAGGGTCAGCATCTGGACCAGAGCTGTTCTaGCAGTTAGTATTACTGGAGGTTCCTGGAAATTTT +
Preference number: 6 (lower is better)
Translates to: REEGSASGPELF*QLVLLEVPGNF
Trigger: AAAATTTCCAGGAACCTCCAGTAATACTAACTGTCAGAACAGCTCTGGTCCAGATGCTGACCCTTCTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp ATGACAAACCCTTGCACATTCCGTACAACAACACAGTaGCTCCAGCAAGCCACAAGTTCGACACTCAAAAAT +
Preference number: 6 (lower is better)
Translates to: MTNPCTFRTTTQ*LQQATSSTLKN
Trigger: ATTTTTGAGTGTCGAACTTGTGGCTTGCTGGAGTCACTGTGTTGTTGTACGGAATGTGCAAGGGTTTGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp AATGCAAGCTGGGCAAATCTTGGAGGCTCTAAATCATaGTCTGGCATATCTGAATCTTCAGGACTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: NASWANLGGSKS*SGISESSGLAV
Trigger: AACAGCCAGTCCTGAAGATTCAGATATGCCAGATCATGATTTAGAGCCTCCAAGATTTGCCCAGCTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp ATCTTGTCGTTCTGTCATGCTCATCTTCTCTACTATTaGCCAGAACCAACGCTTGAACTGCAGAAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: ILSFCHAHLLYY*PEPTLELQKLL
Trigger: GAGAAGCTTCTGCAGTTCAAGCGTTGGTTCTGGTCAATAGTAGAGAAGATGAGCATGACAGAACGACAAGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000517465.1
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp GGTAGTGGTTCCACTGAAAATAATTCTTCACTGCCCTaGATGGCATCTATGCTAGTACTAGCCAGGGTAAAT +
Preference number: 6 (lower is better)
Translates to: GSGSTENNSSLP*MASMLVLARVN
Trigger: ATTTACCCTGGCTAGTACTAGCATAGATGCCATGCAGGGCAGTGAAGAATTATTTTCAGTGGAACCACTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000519528.1
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp AACTCTACCATCCTCAAGAAGAAAGGCAGCATGATTTaGTCCCACCACACACTGTTTAATAGTAGCCTGTTC +
Preference number: 6 (lower is better)
Translates to: NSTILKKKGSMI*SHHTLFNSSLF
Trigger: GAACAGGCTACTATTAAACAGTGTGTGGTGGGACCAAATCATGCTGCCTTTCTTCTTGAGGATGGTAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
ENST00000522327.1
CDS CCA 72 bp TTCAGAAAACATGGCATCTGCATCAATAATGACACTTaGGTGGGCAGAATGAATGTCGGCATCAAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: FRKHGICINNDT*VGRMNVGIKER
Trigger: TCTCTCCTTGATGCCGACATTCATTCTGCCCACCCAAGTGTCATTATTGATGCAGATGCCATGTTTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp TCTAAATCCATATCTACTACACTTCGACTAGAGCCATaGCGCTTTCGGTTTTCCTGTACCTTTTCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: SKSISTTLRLEP*RFRFSCTFSEE
Trigger: CTCCTCAGAAAAGGTACAGGAAAACCGAAAGCGCCATGGCTCTAGTCGAAGTGTAGTAGATATGGATTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000521922.5
CDS CCA 72 bp TCTAAATCCATATCTACTACACTTCGACTAGAGCCATaGCGCTTTCGGTTTTCCTGCTGTACCTTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: SKSISTTLRLEP*RFRFSCCTFSE
Trigger: CTCAGAAAAGGTACAGCAGGAAAACCGAAAGCGCCATGGCTCTAGTCGAAGTGTAGTAGATATGGATTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520539.6
ENST00000521312.1
ENST00000521767.1
CDS CAA 72 bp CCCGATTACCTGGGCCATTACTTGAAACAACTGATATaGCATTTGCAATGGCCTCAACAGCAGAAAGCCTTT +
Preference number: 6 (lower is better)
Translates to: PDYLGHYLKQLI*HLQWPQQQKAF
Trigger: AAAGGCTTTCTGCTGTTGAGGCCATTGCAAATGCAATATCAGTTGTTTCAAGTAATGGCCCAGGTAATCGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000520898.5
ENST00000521922.5
CDS CAA 72 bp GTGACAACGCTTCTGCGCCCACTAGCATTATCTTGGTaGCTGTGGTTACTTTCACTATCACTTTCTGTTTCA +
Preference number: 6 (lower is better)
Translates to: VTTLLRPLALSW*LWLLSLSLSVS
Trigger: TGAAACAGAAAGTGATAGTGAAAGTAACCACAGCAACCAAGATAATGCTAGTGGGCGCAGAAGCGTTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp AACTATAAGGCAATGAGTGAAACAGTCCAGCCGAATTGTGCCACTTaGCTGATTGAGGTATACTTGCTCTTCTGGCAAAAGATGGCCTAT +
Preference number: 6 (lower is better)
Translates to: NYKAMSETVQPNCAT*LIEVYLLFWQKMAY
Trigger: ATAGGCCATCTTTTGCCAGAAGAGCAAGTATACCTCAATCAGCAAAGTGGCACAATTCGGCTGGACTGTTTCACTCATTGCCTTATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp CGTTCTGTCATGCTCATCTTCTCTACTATTGACCAGAACCAACGCTaGAACTGCAGAAGCTTCTCAGCATTTTCTCCTGATTCATCATTG +
Preference number: 6 (lower is better)
Translates to: RSVMLIFSTIDQNQR*NCRSFSAFSPDSSL
Trigger: CAATGATGAATCAGGAGAAAATGCTGAGAAGCTTCTGCAGTTCAAGCGTTGGTTCTGGTCAATAGTAGAGAAGATGAGCATGACAGAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp ATCAGGTTTACCCAATTCCAATCTGTCTGGCTGTACTaGAAAACCAATCCTGCAAACTCTACCATCCTCAAG +
Preference number: 6 (lower is better)
Translates to: IRFTQFQSVWLY*KTNPANSTILK
Trigger: CTTGAGGATGGTAGAGTTTGCAGGATTGGTTTTTCAGTACAGCCAGACAGATTGGAATTGGGTAAACCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
ENST00000522327.1
CDS TCA 72 bp GAGGATTATTTCTCAAGCATACCTGGGTACCAACAGTaGTGTTCGGCATTGAAGAAATACCAGCACTGGATT +
Preference number: 6 (lower is better)
Translates to: EDYFSSIPGYQQ*CSALKKYQHWI
Trigger: AATCCAGTGCTGGTATTTCTTCAATGCCGAACATCACTGTTGGTACCCAGGTATGCTTGAGAAATAATCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp TGCTCATCTTCTCTACTATTGACCAGAACCAACGCTTaGACTGCAGAAGCTTCTCAGCATTTTCTCCTTTGT +
Preference number: 6 (lower is better)
Translates to: CSSSLLLTRTNA*TAEASQHFLLC
Trigger: ACAAAGGAGAAAATGCTGAGAAGCTTCTGCAGTTCAAGCGTTGGTTCTGGTCAATAGTAGAGAAGATGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517465.1
CDS GCA 72 bp TGCAGCATCTGTAGATTCTGCTCTAAAACAACCGCTTaGTCAAGATTCATTAGATATTGTCGACAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: CSICRFCSKTTA*SRFIRYCRQAS
Trigger: TGAGGCCTGTCGACAATATCTAATGAATCTTGAGCAAGCGGTTGTTTTAGAGCAGAATCTACAGATGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp CTGTGGCTGATGAATGTCTGCAGCATCTGTAGATTCTaGTCTAAAACAACCGCTTGCTCAAGATTCATTAGA +
Preference number: 6 (lower is better)
Translates to: LWLMNVCSICRF*SKTTACSRFIR
Trigger: TCTAATGAATCTTGAGCAAGCGGTTGTTTTAGAGCAGAATCTACAGATGCTGCAGACATTCATCAGCCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp TTTCGATTTCCATCACATCTGTGGCTGATGAATGTCTaGAGCATCTGTAGATTCTGCTCTAAAACAACCGCT +
Preference number: 6 (lower is better)
Translates to: FRFPSHLWLMNV*SICRFCSKTTA
Trigger: AGCGGTTGTTTTAGAGCAGAATCTACAGATGCTGCAGACATTCATCAGCCACAGATGTGATGGAAATCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp TGGACTTTGAACAGGTGTATTCTTCTTATCCAAGTTTaGCTCTCCTTCCTTGCTGGTAGAACCCCTTTCATT +
Preference number: 6 (lower is better)
Translates to: WTLNRCILLIQV*LSFLAGRTPFI
Trigger: AATGAAAGGGGTTCTACCAGCAAGGAAGGAGAGCCAAACTTGGATAAGAAGAATACACCTGTTCAAAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp GGTGTATTCTTCTTATCCAAGTTTGGCTCTCCTTCCTaGCTGGTAGAACCCCTTTCATTATCAAATGAGGCT +
Preference number: 6 (lower is better)
Translates to: GVFFLSKFGSPS*LVEPLSLSNEA
Trigger: AGCCTCATTTGATAATGAAAGGGGTTCTACCAGCAAGGAAGGAGAGCCAAACTTGGATAAGAAGAATACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp TACTTGATGATCCAGCCCGATTACCTGGGCCATTACTaGAAACAACTGATATTGCATTTGCAATGGCCTCAA +
Preference number: 6 (lower is better)
Translates to: YLMIQPDYLGHY*KQLILHLQWPQ
Trigger: TTGAGGCCATTGCAAATGCAATATCAGTTGTTTCAAGTAATGGCCCAGGTAATCGGGCTGGATCATCAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000520898.5
ENST00000521922.5
CDS CAA 72 bp ATGCTCATCTTCTCTACTATTGACCAGAACCAACGCTaGAACTGCAGAAGCTTCTCAGCATTTTCTCCTGAT +
Preference number: 6 (lower is better)
Translates to: MLIFSTIDQNQR*NCRSFSAFSPD
Trigger: ATCAGGAGAAAATGCTGAGAAGCTTCTGCAGTTCAAGCGTTGGTTCTGGTCAATAGTAGAGAAGATGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp ATGCTCATCTTCTCTACTATTGACCAGAACCAACGCTaGAACTGCAGAAGCTTCTCAGCATTTTCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: MLIFSTIDQNQR*NCRSFSAFSPL
Trigger: CAAAGGAGAAAATGCTGAGAAGCTTCTGCAGTTCAAGCGTTGGTTCTGGTCAATAGTAGAGAAGATGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517465.1
CDS TCA 72 bp CACCACTGCAAATCTTCTCCTAGAGATACTGGACTTTaGACAGGTGTATTCTTCTTATCCAAGTTTGGCTCT +
Preference number: 6 (lower is better)
Translates to: HHCKSSPRDTGL*TGVFFLSKFGS
Trigger: AGAGCCAAACTTGGATAAGAAGAATACACCTGTTCAAAGTCCAGTATCTCTAGGAGAAGATTTGCAGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp AGCAAAATATCTGCTGTACACTTAACTATAAGGCAATaGGTGAAACAGTCCAGCCGAATTGTGCCACTTTGC +
Preference number: 6 (lower is better)
Translates to: SKISAVHLTIRQ*VKQSSRIVPLC
Trigger: GCAAAGTGGCACAATTCGGCTGGACTGTTTCACTCATTGCCTTATAGTTAAGTGTACAGCAGATATTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp TCAAGCATAAAGGTCTCCTGTTCTATGTCGTCACTCTaGCTACTACTGCTATCAGAATCACTTGAGTCATTC +
Preference number: 6 (lower is better)
Translates to: SSIKVSCSMSSL*LLLLSESLESF
Trigger: GAATGACTCAAGTGATTCTGATAGCAGTAGTAGTCAGAGTGACGACATAGAACAGGAGACCTTTATGCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp AGGTCTCCTGTTCTATGTCGTCACTCTGACTACTACTaGTATCAGAATCACTTGAGTCATTCGATTGAGAAT +
Preference number: 6 (lower is better)
Translates to: RSPVLCRHSDYY*YQNHLSHSIEN
Trigger: ATTCTCAATCGAATGACTCAAGTGATTCTGATAGCAGTAGTAGTCAGAGTGACGACATAGAACAGGAGACCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp ATAGAGTGGGACGTAAAGTCGAGAAATGCAAGTATTTaGAGTAGGAAGATGTTGGTCATCTGGTGGTCTTAT +
Preference number: 6 (lower is better)
Translates to: IEWDVKSRNASI*SRKMLVIWWSY
Trigger: ATAAGACCACCAGATGACCAACATCTTCCTACTGCAAATACTTGCATTTCTCGACTTTACGTCCCACTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000517465.1
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp ATCTTCTCTACTATTGACCAGAACCAACGCTTGAACTaGAGAAGCTTCTCAGCATTTTCTCCTTTGTGTACA +
Preference number: 6 (lower is better)
Translates to: IFSTIDQNQRLN*RSFSAFSPLCT
Trigger: TGTACACAAAGGAGAAAATGCTGAGAAGCTTCTGCAGTTCAAGCGTTGGTTCTGGTCAATAGTAGAGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517465.1
CDS CCA 72 bp CAAGCATGCAAAATATTTCGATTTCCATCACATCTGTaGCTGATGAATGTCTGCAGCATCTGTAGATTCTGC +
Preference number: 6 (lower is better)
Translates to: QACKIFRFPSHL*LMNVCSICRFC
Trigger: GCAGAATCTACAGATGCTGCAGACATTCATCAGCCACAGATGTGATGGAAATCGAAATATTTTGCATGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp CCTGTTCTATGTCGTCACTCTGACTACTACTGCTATCAGAATCACTaGAGTCATTCGATTGAGAATCATCTTCAGAAAAGAAGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: PVLCRHSDYYCYQNH*SHSIENHLQKRRQE
Trigger: TTCCTGCCTTCTTTTCTGAAGATGATTCTCAATCGAATGACTCAAGTGATTCTGATAGCAGTAGTAGTCAGAGTGACGACATAGAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp CAAGTGTCATTACAACATAAAACATATAAAGGAGAGTCATCAGGGTaGGTACCTGATGGGCAAACCATTCCCATGAATACATCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: QVSLQHKTYKGESSG*VPDGQTIPMNTSSS
Trigger: AGAGGAAGATGTATTCATGGGAATGGTTTGCCCATCAGGTACCAACCCTGATGACTCTCCTTTATATGTTTTATGTTGTAATGACACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp CCCAGAGTTCAGGAGAATTTTCTCACTCCATCACTAGATAGAATATaGAAGATGATCATTCAGACTGAGAGCACTCACAGGAAGATGATA +
Preference number: 6 (lower is better)
Translates to: PRVQENFLTPSLDRI*KMIIQTESTHRKMI
Trigger: TATCATCTTCCTGTGAGTGCTCTCAGTCTGAATGATCATCTTCAATATTCTATCTAGTGATGGAGTGAGAAAATTCTCCTGAACTCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522327.1
CDS TCA 72 bp TTTACATTTCTCCCAACAATCACAGTAGGCTGTTGGTaGTGTCCGTTTGAGTTTGCAATCATGACCTTTATG +
Preference number: 6 (lower is better)
Translates to: FTFLPTITVGCW*CPFEFAIMTFM
Trigger: CATAAAGGTCATGATTGCAAACTCAAACGGACATCACCAACAGCCTACTGTGATTGTTGGGAGAAATGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp AGTTCGACACTCAAAAATATCCTGGTTAATGTGCTCTaGTCCAGTCCATGTAAAACTGCAAGTGTCATTACA +
Preference number: 6 (lower is better)
Translates to: SSTLKNILVNVL*SSPCKTASVIT
Trigger: TGTAATGACACTTGCAGTTTTACATGGACTGGAGCAGAGCACATTAACCAGGATATTTTTGAGTGTCGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS GCA 72 bp GATTCATCATTGAAAGAGGTAAAACTGATCAGCATTTaGACATTGACTTCACCGCAGCCATTTACCAAAAGC +
Preference number: 6 (lower is better)
Translates to: DSSLKEVKLISI*TLTSPQPFTKS
Trigger: GCTTTTGGTAAATGGCTGCGGTGAAGTCAATGTGCAAATGCTGATCAGTTTTACCTCTTTCAATGATGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000517465.1
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp AGAGCTGTTCTGACAGTTAGTATTACTGGAGGTTCCTaGAAATTTTACAGCAACATAGGCACCATCTACTTT +
Preference number: 6 (lower is better)
Translates to: RAVLTVSITGGS*KFYSNIGTIYF
Trigger: AAAGTAGATGGTGCCTATGTTGCTGTAAAATTTCCAGGAACCTCCAGTAATACTAACTGTCAGAACAGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp CAGGAGAATTTTCTCACTCCATCACTAGATAGAATATaGAAGATGATCATTCAGACTGAGAGCACTCACAGG +
Preference number: 6 (lower is better)
Translates to: QENFLTPSLDRI*KMIIQTESTHR
Trigger: CCTGTGAGTGCTCTCAGTCTGAATGATCATCTTCAATATTCTATCTAGTGATGGAGTGAGAAAATTCTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522327.1
CDS TCA 72 bp GTCGTCACTCTGACTACTACTGCTATCAGAATCACTTaGGTCATTCGATTGAGAATCATCTTCAGAAAAGAA +
Preference number: 6 (lower is better)
Translates to: VVTLTTTAIRIT*VIRLRIIFRKE
Trigger: TTCTTTTCTGAAGATGATTCTCAATCGAATGACTCAAGTGATTCTGATAGCAGTAGTAGTCAGAGTGACGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp ATCCTTAAATGTGACTTTTACTCTGTGTACAGCCATTaGTGTAGTAGCACATCTTCGACCAAAGTGATTGTT +
Preference number: 6 (lower is better)
Translates to: ILKCDFYSVYSH*CSSTSSTKVIV
Trigger: AACAATCACTTTGGTCGAAGATGTGCTACTACACCAATGGCTGTACACAGAGTAAAAGTCACATTTAAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521566.1
ENST00000521922.5
CDS CCA 72 bp TTTCCGCACATACTCATATACATTCTGTGGAGTGACTaGTATATTTACACCATTAGGAATGAGTTCAACCTG +
Preference number: 6 (lower is better)
Translates to: FPHILIYILWSD*YIYTIRNEFNL
Trigger: CAGGTTGAACTCATTCCTAATGGTGTAAATATACCAGTCACTCCACAGAATGTATATGAGTATGTGCGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000517465.1
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp ACAGCAATAGCTTCTTCTCTACGTCCAGGTGTATATTaGTTTTGGAGTTCTTTCACTAGTGTACCTAGTAGA +
Preference number: 6 (lower is better)
Translates to: TAIASSLRPGVY*FWSSFTSVPSR
Trigger: TCTACTAGGTACACTAGTGAAAGAACTCCAAAACAAATATACACCTGGACGTAGAGAAGAAGCTATTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CAA 72 bp TCATTGAAAGAGGTAAAACTGATCAGCATTTGCACATaGACTTCACCGCAGCCATTTACCAAAAGCCTAAAA +
Preference number: 6 (lower is better)
Translates to: SLKEVKLISICT*TSPQPFTKSLK
Trigger: TTTTAGGCTTTTGGTAAATGGCTGCGGTGAAGTCAATGTGCAAATGCTGATCAGTTTTACCTCTTTCAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000517465.1
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp CTCATTGTCACAGCAATAGCTTCTTCTCTACGTCCAGGTGTATATTaGTTTTGGAGTTCTTTCACTAGTGTACCTAGTAGAGTATCTAAA +
Preference number: 6 (lower is better)
Translates to: LIVTAIASSLRPGVY*FWSSFTSVPSRVSK
Trigger: TTTAGATACTCTACTAGGTACACTAGTGAAAGAACTCCAAAACAAATATACACCTGGACGTAGAGAAGAAGCTATTGCTGTGACAATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp ATAGCTTCTTCTCTACGTCCAGGTGTATATTTGTTTTaGAGTTCTTTCACTAGTGTACCTAGTAGAGTATCT +
Preference number: 6 (lower is better)
Translates to: IASSLRPGVYLF*SSFTSVPSRVS
Trigger: AGATACTCTACTAGGTACACTAGTGAAAGAACTCCAAAACAAATATACACCTGGACGTAGAGAAGAAGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220959.8
ENST00000520539.6
ENST00000521922.5
CDS CCA 72 bp CAATTTCTGTTTGAGAATCTGTTTAGAGGAATAGAGTaGGACGTAAAGTCGAGAAATGCAAGTATTTGCAGT +
Preference number: 6 (lower is better)
Translates to: QFLFENLFRGIE*DVKSRNASICS
Trigger: ACTGCAAATACTTGCATTTCTCGACTTTACGTCCCACTCTATTCCTCTAAACAGATTCTCAAACAGAAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000517465.1
ENST00000518205.5
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp TTTCTTTCAGAACGCTCCGCTTCCTCTTCTTCTTTAGTTTCTTTATaGCTGGTTGGAAAGCAAACTGATACACAAGCATGCAAAATATTT +
Preference number: 6 (lower is better)
Translates to: FLSERSASSSSLVSL*LVGKQTDTQACKIF
Trigger: AAATATTTTGCATGCTTGTGTATCAGTTTGCTTTCCAACCAGCAATAAAGAAACTAAAGAAGAAGAGGAAGCGGAGCGTTCTGAAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000521922.5
CDS CAA 90 bp TTTACTCCAGAAAGCCAGGTGAAAGCTGTCAATATTGTACATTGGTaGCATTCAACAGAAAACATGACTAAATACGCAACTCTTAACATA +
Preference number: 6 (lower is better)
Translates to: FTPESQVKAVNIVHW*HSTENMTKYATLNI
Trigger: TATGTTAAGAGTTGCGTATTTAGTCATGTTTTCTGTTGAATGCAACCAATGTACAATATTGACAGCTTTCACCTGGCTTTCTGGAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521767.1
CDS TCA 72 bp TTATTTACAGCAAGGTTCACATCAAGATTTGTTCTCTaGAGTTCTCGAATAATGACACTTCTGGATTTGCCT +
Preference number: 6 (lower is better)
Translates to: LFTARFTSRFVL*SSRIMTLLDLP
Trigger: AGGCAAATCCAGAAGTGTCATTATTCGAGAACTTCAGAGAACAAATCTTGATGTGAACCTTGCTGTAAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220959.8
ENST00000518145.1
ENST00000520539.6
ENST00000521922.5
CDS TCA 72 bp AGAACCACACTGTCACATAACAATTTCAATATAAAATaGGCATTCGCCTTTCGATCCTTGGATTCTACTACA +
Preference number: 6 (lower is better)
Translates to: RTTLSHNNFNIK*AFAFRSLDSTT
Trigger: TGTAGTAGAATCCAAGGATCGAAAGGCGAATGCTCATTTTATATTGAAATTGTTATGTGACAGTGTGGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000519365.1
ENST00000520539.6
ENST00000520898.5
ENST00000521922.5
CDS CCA 72 bp TTAATCTCTGCATTAAACTTGTGTGGGTGCCTTTGTTaGCATTTTGGATACACTCTAGATTTGGCAATTTTT +
Preference number: 6 (lower is better)
Translates to: LISALNLCGCLC*HFGYTLDLAIF
Trigger: AAAAATTGCCAAATCTAGAGTGTATCCAAAATGCCAACAAAGGCACCCACACAAGTTTAATGCAGAGATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220959.8
ENST00000518205.5
ENST00000520539.6
ENST00000521566.1
ENST00000521922.5
CDS CAA 72 bp CGGCCTTATCTTCCTAAGTCACTTTTACTTGTCACCTaGGAAAAAGGGATATGTAATCTGTTAGATATTTTT +
Preference number: 6 (lower is better)
Translates to: RPYLPKSLLLVT*EKGICNLLDIF
Trigger: AAAAATATCTAACAGATTACATATCCCTTTTTCCAAGGTGACAAGTAAAAGTGACTTAGGAAGATAAGGCCG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521767.1